Query 009409
Match_columns 535
No_of_seqs 562 out of 2838
Neff 10.4
Searched_HMMs 46136
Date Thu Mar 28 12:46:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009409.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009409hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 1.6E-42 3.4E-47 324.8 24.6 408 112-528 27-439 (448)
2 COG2814 AraJ Arabinose efflux 100.0 5.7E-38 1.2E-42 299.2 36.7 378 114-528 13-391 (394)
3 TIGR00894 2A0114euk Na(+)-depe 100.0 1.9E-37 4.1E-42 317.9 39.4 422 108-535 13-461 (465)
4 PRK09556 uhpT sugar phosphate 100.0 1.2E-38 2.5E-43 326.3 30.2 399 112-522 27-448 (467)
5 PRK11663 regulatory protein Uh 100.0 1.6E-37 3.4E-42 314.9 36.3 406 112-528 21-429 (434)
6 KOG2532 Permease of the major 100.0 9E-37 2E-41 304.1 36.0 389 141-534 65-457 (466)
7 TIGR02332 HpaX 4-hydroxyphenyl 100.0 4.5E-37 9.9E-42 309.0 32.9 388 112-511 6-409 (412)
8 PRK03545 putative arabinose tr 100.0 3.6E-36 7.7E-41 301.4 38.0 373 113-524 8-381 (390)
9 TIGR00893 2A0114 d-galactonate 100.0 4.8E-36 1E-40 301.3 35.8 394 123-520 3-396 (399)
10 TIGR01299 synapt_SV2 synaptic 100.0 6.2E-36 1.3E-40 313.1 37.4 406 110-529 163-739 (742)
11 PRK09705 cynX putative cyanate 100.0 2.1E-35 4.6E-40 295.4 35.8 382 113-534 9-392 (393)
12 PRK11551 putative 3-hydroxyphe 100.0 1.4E-34 3E-39 291.8 39.2 382 111-524 12-397 (406)
13 PRK11273 glpT sn-glycerol-3-ph 100.0 8.3E-35 1.8E-39 296.6 36.6 401 113-523 28-435 (452)
14 PRK14995 methyl viologen resis 100.0 1.3E-34 2.9E-39 298.1 36.9 373 112-496 4-412 (495)
15 PRK03699 putative transporter; 100.0 4.6E-34 1E-38 286.2 37.1 376 110-522 3-379 (394)
16 PRK10091 MFS transport protein 100.0 4.8E-34 1E-38 284.9 35.4 375 114-526 3-379 (382)
17 PLN00028 nitrate transmembrane 100.0 1.5E-33 3.2E-38 288.4 39.6 389 113-522 35-432 (476)
18 PRK15034 nitrate/nitrite trans 100.0 9.5E-34 2.1E-38 280.4 36.4 377 113-527 33-458 (462)
19 PRK10642 proline/glycine betai 100.0 4.3E-33 9.4E-38 286.6 42.6 387 113-520 15-427 (490)
20 TIGR00903 2A0129 major facilit 100.0 6E-34 1.3E-38 280.4 34.5 359 126-520 3-362 (368)
21 PRK10406 alpha-ketoglutarate t 100.0 2.6E-33 5.6E-38 284.1 40.1 377 113-522 21-423 (432)
22 TIGR00891 2A0112 putative sial 100.0 7.3E-34 1.6E-38 286.6 35.3 387 111-507 9-400 (405)
23 PRK10213 nepI ribonucleoside t 100.0 5.4E-33 1.2E-37 277.7 41.0 362 114-515 20-383 (394)
24 TIGR00712 glpT glycerol-3-phos 100.0 1.5E-33 3.2E-38 286.4 34.5 406 112-527 25-437 (438)
25 TIGR00892 2A0113 monocarboxyla 100.0 1.1E-33 2.4E-38 287.8 32.7 397 112-517 17-415 (455)
26 COG2223 NarK Nitrate/nitrite t 100.0 2.5E-33 5.4E-38 263.8 31.9 382 112-526 12-404 (417)
27 PRK15402 multidrug efflux syst 100.0 1.2E-32 2.5E-37 277.6 39.3 363 112-505 11-378 (406)
28 PRK12307 putative sialic acid 100.0 2.6E-33 5.6E-38 284.4 34.7 368 112-503 16-388 (426)
29 TIGR00890 2A0111 Oxalate/Forma 100.0 2.4E-33 5.2E-38 279.8 33.2 358 125-514 14-373 (377)
30 TIGR00881 2A0104 phosphoglycer 100.0 7.5E-34 1.6E-38 283.7 28.7 374 121-504 2-378 (379)
31 PRK05122 major facilitator sup 100.0 1.7E-32 3.7E-37 275.9 37.9 373 114-529 15-395 (399)
32 PRK10489 enterobactin exporter 100.0 1.6E-33 3.4E-38 284.8 30.0 380 120-530 23-406 (417)
33 TIGR00900 2A0121 H+ Antiporter 100.0 1.2E-32 2.6E-37 273.6 34.7 357 119-499 4-365 (365)
34 PRK10504 putative transporter; 100.0 4.3E-32 9.3E-37 279.0 39.0 374 114-499 10-417 (471)
35 TIGR00897 2A0118 polyol permea 100.0 4.8E-32 1E-36 272.3 38.2 379 114-521 13-399 (402)
36 TIGR00711 efflux_EmrB drug res 100.0 9.7E-33 2.1E-37 285.2 33.5 372 114-497 2-410 (485)
37 PRK09952 shikimate transporter 100.0 1.2E-31 2.6E-36 272.0 40.1 384 110-521 18-431 (438)
38 PRK15075 citrate-proton sympor 100.0 1.2E-31 2.7E-36 271.9 39.9 359 112-500 13-397 (434)
39 TIGR00879 SP MFS transporter, 100.0 2.5E-32 5.4E-37 281.6 34.2 405 115-530 29-477 (481)
40 TIGR00710 efflux_Bcr_CflA drug 100.0 2.2E-31 4.7E-36 266.7 38.7 353 113-497 4-361 (385)
41 PRK03893 putative sialic acid 100.0 8.2E-32 1.8E-36 278.9 36.3 391 111-512 17-442 (496)
42 PF07690 MFS_1: Major Facilita 100.0 4.9E-33 1.1E-37 274.9 25.9 347 120-488 2-352 (352)
43 PRK03633 putative MFS family t 100.0 1.8E-31 4E-36 266.3 37.0 360 113-515 5-364 (381)
44 KOG2533 Permease of the major 100.0 7.9E-33 1.7E-37 276.2 26.2 385 113-505 44-438 (495)
45 PRK15403 multidrug efflux syst 100.0 3.7E-31 8E-36 266.1 37.6 368 115-513 17-387 (413)
46 PRK12382 putative transporter; 100.0 2.5E-31 5.5E-36 266.6 35.5 366 114-522 15-388 (392)
47 PRK10133 L-fucose transporter; 100.0 7.1E-31 1.5E-35 265.3 38.6 366 114-512 26-422 (438)
48 PRK09874 drug efflux system pr 100.0 4.7E-31 1E-35 266.4 36.8 376 114-524 14-399 (408)
49 PRK11043 putative transporter; 100.0 8.4E-31 1.8E-35 263.7 38.4 352 114-498 6-358 (401)
50 TIGR00899 2A0120 sugar efflux 100.0 8.4E-31 1.8E-35 261.5 36.8 362 121-519 4-370 (375)
51 PRK10077 xylE D-xylose transpo 100.0 3.3E-31 7.1E-36 273.2 34.8 407 112-529 10-463 (479)
52 PRK11652 emrD multidrug resist 100.0 4.6E-30 1E-34 257.7 40.8 352 113-497 7-360 (394)
53 PRK11195 lysophospholipid tran 100.0 9.2E-31 2E-35 261.6 35.1 377 118-527 7-384 (393)
54 PRK11646 multidrug resistance 100.0 9.6E-31 2.1E-35 262.1 35.0 364 120-520 16-385 (400)
55 TIGR00902 2A0127 phenyl propri 100.0 2.2E-30 4.7E-35 258.5 36.2 361 119-515 9-371 (382)
56 PRK11010 ampG muropeptide tran 100.0 5.7E-30 1.2E-34 262.4 38.5 376 118-523 16-403 (491)
57 TIGR00895 2A0115 benzoate tran 100.0 1.4E-30 2.9E-35 262.0 32.7 371 112-494 15-397 (398)
58 PRK10054 putative transporter; 100.0 1.2E-30 2.6E-35 261.0 31.1 380 116-534 9-392 (395)
59 PRK10473 multidrug efflux syst 100.0 1.1E-29 2.4E-34 254.8 37.8 348 114-499 3-351 (392)
60 TIGR00885 fucP L-fucose:H+ sym 100.0 8E-30 1.7E-34 255.4 36.5 366 116-515 5-404 (410)
61 cd06174 MFS The Major Facilita 100.0 8.9E-30 1.9E-34 251.4 36.5 346 118-519 3-348 (352)
62 PRK11102 bicyclomycin/multidru 100.0 9.9E-30 2.1E-34 253.9 37.1 334 128-492 5-344 (377)
63 TIGR00887 2A0109 phosphate:H+ 100.0 3.3E-30 7.1E-35 266.3 33.1 409 112-532 14-497 (502)
64 TIGR00898 2A0119 cation transp 100.0 7.2E-30 1.6E-34 264.8 32.6 377 135-532 110-503 (505)
65 TIGR00896 CynX cyanate transpo 100.0 3.8E-30 8.2E-35 254.5 28.8 338 128-503 14-354 (355)
66 PRK11128 putative 3-phenylprop 100.0 1.2E-28 2.6E-33 246.0 36.2 353 122-513 12-369 (382)
67 TIGR00883 2A0106 metabolite-pr 100.0 3.7E-29 8.1E-34 251.1 32.6 358 124-510 3-388 (394)
68 KOG2504 Monocarboxylate transp 100.0 1.5E-29 3.2E-34 255.7 28.5 400 113-523 45-476 (509)
69 PRK15011 sugar efflux transpor 100.0 3.7E-28 8E-33 243.4 38.6 364 118-520 19-388 (393)
70 KOG1330 Sugar transporter/spin 100.0 5.4E-31 1.2E-35 249.7 16.9 379 112-502 31-417 (493)
71 TIGR00886 2A0108 nitrite extru 100.0 3.5E-29 7.6E-34 248.9 29.8 347 118-484 5-366 (366)
72 PRK11902 ampG muropeptide tran 100.0 1.1E-27 2.4E-32 240.8 39.3 373 119-525 4-392 (402)
73 TIGR00889 2A0110 nucleoside tr 100.0 2.2E-28 4.8E-33 246.0 33.9 381 118-534 6-414 (418)
74 PRK09528 lacY galactoside perm 100.0 8.5E-29 1.9E-33 250.4 29.8 380 118-525 14-405 (420)
75 COG2807 CynX Cyanate permease 100.0 3.9E-28 8.4E-33 223.5 30.7 362 127-526 25-388 (395)
76 PRK06814 acylglycerophosphoeth 100.0 1.9E-28 4E-33 277.9 35.4 377 115-515 16-414 (1140)
77 PF05977 MFS_3: Transmembrane 100.0 8.2E-28 1.8E-32 244.2 35.7 378 114-520 10-391 (524)
78 COG0738 FucP Fucose permease [ 100.0 8.9E-28 1.9E-32 224.7 32.4 357 114-503 13-390 (422)
79 TIGR00882 2A0105 oligosacchari 100.0 1.6E-27 3.6E-32 239.2 33.9 376 116-519 4-391 (396)
80 TIGR00805 oat sodium-independe 100.0 1.5E-28 3.2E-33 257.4 25.6 288 115-402 34-397 (633)
81 TIGR00924 yjdL_sub1_fam amino 100.0 5.1E-26 1.1E-30 232.0 38.8 407 114-525 10-470 (475)
82 TIGR02718 sider_RhtX_FptX side 100.0 5.4E-26 1.2E-30 227.8 38.0 367 116-515 3-383 (390)
83 PRK08633 2-acyl-glycerophospho 100.0 1E-26 2.2E-31 264.8 36.4 367 120-510 15-397 (1146)
84 PRK10207 dipeptide/tripeptide 100.0 8.1E-26 1.8E-30 230.5 38.6 406 114-524 14-477 (489)
85 KOG3764 Vesicular amine transp 100.0 2.6E-27 5.6E-32 219.7 18.9 352 139-523 96-454 (464)
86 TIGR00901 2A0125 AmpG-related 100.0 1.4E-25 3E-30 222.1 30.3 320 131-481 5-355 (356)
87 TIGR00792 gph sugar (Glycoside 99.9 8.5E-25 1.8E-29 222.8 32.3 343 127-499 12-382 (437)
88 TIGR00806 rfc RFC reduced fola 99.9 4E-25 8.7E-30 214.3 26.7 391 115-517 28-442 (511)
89 PF03825 Nuc_H_symport: Nucleo 99.9 6.8E-24 1.5E-28 209.6 35.6 375 119-524 7-396 (400)
90 PF01306 LacY_symp: LacY proto 99.9 1.4E-23 3E-28 203.1 33.2 392 112-531 5-408 (412)
91 KOG2615 Permease of the major 99.9 3.7E-24 8E-29 197.7 25.7 355 140-510 59-427 (451)
92 PRK09584 tppB putative tripept 99.9 6.5E-23 1.4E-27 210.4 35.3 397 116-522 23-478 (500)
93 KOG0253 Synaptic vesicle trans 99.9 7.8E-23 1.7E-27 187.5 31.4 401 113-529 77-525 (528)
94 PF06609 TRI12: Fungal trichot 99.9 4.9E-23 1.1E-27 208.3 33.2 365 120-496 50-466 (599)
95 KOG0569 Permease of the major 99.9 4.7E-23 1E-27 203.2 31.6 368 152-531 63-462 (485)
96 KOG4686 Predicted sugar transp 99.9 7.3E-25 1.6E-29 193.6 15.3 362 113-502 43-419 (459)
97 KOG0255 Synaptic vesicle trans 99.9 5E-23 1.1E-27 214.1 31.8 412 93-529 68-498 (521)
98 KOG0254 Predicted transporter 99.9 2.3E-22 5.1E-27 207.9 32.2 401 119-532 50-492 (513)
99 PTZ00207 hypothetical protein; 99.9 1.5E-21 3.3E-26 199.0 32.3 388 128-522 41-551 (591)
100 PF11700 ATG22: Vacuole efflux 99.9 1.2E-20 2.7E-25 189.9 38.2 355 151-524 72-469 (477)
101 TIGR01301 GPH_sucrose GPH fami 99.9 7.5E-21 1.6E-25 190.1 35.5 391 117-528 7-476 (477)
102 PRK15462 dipeptide/tripeptide 99.9 2E-20 4.4E-25 187.8 37.9 395 114-515 9-469 (493)
103 KOG0252 Inorganic phosphate tr 99.9 2.9E-23 6.3E-28 196.4 13.5 405 113-530 40-504 (538)
104 PRK09669 putative symporter Ya 99.9 1.2E-20 2.7E-25 192.1 33.9 341 126-499 21-390 (444)
105 TIGR00788 fbt folate/biopterin 99.9 1.1E-21 2.5E-26 199.6 25.9 370 114-499 26-415 (468)
106 TIGR01272 gluP glucose/galacto 99.9 1.8E-20 3.8E-25 180.3 29.6 279 199-510 6-302 (310)
107 PF00083 Sugar_tr: Sugar (and 99.9 2E-26 4.4E-31 235.7 -17.7 399 121-533 7-446 (451)
108 PRK10429 melibiose:sodium symp 99.9 1.1E-19 2.5E-24 186.1 31.2 351 121-499 13-395 (473)
109 KOG2563 Permease of the major 99.9 2.5E-20 5.3E-25 177.0 23.7 398 105-528 36-455 (480)
110 PF13347 MFS_2: MFS/sugar tran 99.9 6.5E-20 1.4E-24 185.8 28.6 345 126-499 13-386 (428)
111 PRK09848 glucuronide transport 99.9 6.2E-19 1.3E-23 179.9 32.3 347 121-499 15-390 (448)
112 COG2270 Permeases of the major 99.8 1.2E-18 2.7E-23 164.8 28.1 352 148-523 57-429 (438)
113 PRK11462 putative transporter; 99.8 5.7E-17 1.2E-21 165.1 36.3 344 122-498 17-388 (460)
114 KOG3626 Organic anion transpor 99.8 1.6E-17 3.4E-22 169.4 27.3 288 114-402 97-459 (735)
115 COG3104 PTR2 Dipeptide/tripept 99.8 8.1E-17 1.8E-21 156.1 30.4 386 140-527 52-491 (498)
116 PF03209 PUCC: PUCC protein; 99.8 8.6E-16 1.9E-20 146.2 33.4 353 140-516 6-391 (403)
117 PF03137 OATP: Organic Anion T 99.8 1.9E-20 4.2E-25 191.2 -0.1 379 116-498 5-515 (539)
118 COG2211 MelB Na+/melibiose sym 99.8 1.9E-15 4.2E-20 148.1 32.4 353 118-499 16-398 (467)
119 KOG2325 Predicted transporter/ 99.7 3.2E-16 7E-21 153.7 23.5 392 113-528 33-480 (488)
120 KOG2816 Predicted transporter 99.6 1.1E-13 2.4E-18 138.1 24.9 362 113-498 21-393 (463)
121 PF03092 BT1: BT1 family; Int 99.6 7.8E-14 1.7E-18 140.3 19.0 348 134-499 10-382 (433)
122 COG2271 UhpC Sugar phosphate p 99.6 9.4E-15 2E-19 138.5 9.4 188 102-289 240-433 (448)
123 TIGR00889 2A0110 nucleoside tr 99.6 2.7E-14 5.9E-19 143.9 12.6 162 131-292 225-405 (418)
124 PF05631 DUF791: Protein of un 99.5 2.2E-12 4.7E-17 121.3 22.5 249 126-398 46-304 (354)
125 PRK10642 proline/glycine betai 99.5 2.7E-13 5.8E-18 139.9 17.9 172 124-295 260-435 (490)
126 PRK15011 sugar efflux transpor 99.5 2E-13 4.3E-18 136.9 16.4 159 131-291 233-392 (393)
127 PRK10054 putative transporter; 99.5 1.2E-12 2.7E-17 131.0 19.7 176 336-523 7-182 (395)
128 TIGR01299 synapt_SV2 synaptic 99.5 3.6E-13 7.7E-18 142.3 16.4 139 153-293 599-737 (742)
129 TIGR00890 2A0111 Oxalate/Forma 99.5 1.6E-13 3.5E-18 136.7 12.8 154 129-282 220-374 (377)
130 TIGR00880 2_A_01_02 Multidrug 99.5 8.1E-14 1.8E-18 117.6 9.1 134 155-289 4-137 (141)
131 PRK05122 major facilitator sup 99.5 7.4E-13 1.6E-17 133.2 17.6 161 131-294 233-393 (399)
132 PF01770 Folate_carrier: Reduc 99.5 2.8E-11 6E-16 117.1 25.6 336 137-482 27-387 (412)
133 PRK03545 putative arabinose tr 99.5 1.1E-12 2.3E-17 131.6 16.5 152 137-290 229-380 (390)
134 PRK09528 lacY galactoside perm 99.5 2E-13 4.3E-18 138.3 10.7 147 142-289 255-402 (420)
135 PRK09556 uhpT sugar phosphate 99.5 7.6E-13 1.6E-17 135.8 14.9 174 116-289 260-448 (467)
136 TIGR00902 2A0127 phenyl propri 99.5 1.1E-12 2.5E-17 130.9 15.8 164 120-286 211-375 (382)
137 PRK09874 drug efflux system pr 99.5 4.6E-13 9.9E-18 135.2 12.9 159 129-288 234-396 (408)
138 cd06174 MFS The Major Facilita 99.5 1.4E-12 3.1E-17 128.4 15.5 166 122-288 183-350 (352)
139 PRK11551 putative 3-hydroxyphe 99.5 8.8E-13 1.9E-17 133.0 14.1 161 128-289 234-395 (406)
140 TIGR00899 2A0120 sugar efflux 99.4 2.6E-12 5.7E-17 128.0 16.3 155 133-289 218-373 (375)
141 PRK12382 putative transporter; 99.4 4E-12 8.8E-17 127.5 17.4 157 129-288 231-387 (392)
142 PRK03699 putative transporter; 99.4 1.9E-12 4.1E-17 129.9 15.0 171 119-291 210-381 (394)
143 PRK09705 cynX putative cyanate 99.4 7.4E-12 1.6E-16 125.4 18.6 166 122-289 213-380 (393)
144 PRK03633 putative MFS family t 99.4 3.5E-12 7.5E-17 127.4 16.2 155 131-289 217-371 (381)
145 TIGR00893 2A0114 d-galactonate 99.4 2.9E-12 6.3E-17 128.5 15.7 168 117-286 218-395 (399)
146 TIGR00883 2A0106 metabolite-pr 99.4 5.8E-13 1.3E-17 133.5 10.4 164 117-280 222-391 (394)
147 PRK15462 dipeptide/tripeptide 99.4 1.6E-11 3.4E-16 123.9 20.1 176 335-521 8-186 (493)
148 PRK11663 regulatory protein Uh 99.4 3.7E-12 8E-17 129.4 15.7 172 118-289 247-423 (434)
149 PRK10489 enterobactin exporter 99.4 2E-12 4.4E-17 130.8 13.8 161 132-293 241-403 (417)
150 TIGR00924 yjdL_sub1_fam amino 99.4 1.4E-11 3E-16 126.1 20.0 169 336-515 10-184 (475)
151 PRK11273 glpT sn-glycerol-3-ph 99.4 1.3E-12 2.9E-17 133.4 12.4 176 118-293 257-438 (452)
152 PRK03893 putative sialic acid 99.4 2.3E-12 5E-17 133.6 14.3 149 132-280 293-443 (496)
153 COG2814 AraJ Arabinose efflux 99.4 7.7E-12 1.7E-16 120.4 16.2 176 114-291 212-387 (394)
154 TIGR00879 SP MFS transporter, 99.4 4.1E-12 8.9E-17 130.9 14.9 177 113-289 283-469 (481)
155 TIGR00897 2A0118 polyol permea 99.4 4.3E-12 9.3E-17 127.7 14.6 168 120-289 228-400 (402)
156 TIGR00892 2A0113 monocarboxyla 99.4 1.1E-12 2.4E-17 133.9 9.7 162 121-283 248-414 (455)
157 PF07690 MFS_1: Major Facilita 99.4 2.3E-11 5E-16 120.0 18.8 166 342-518 2-167 (352)
158 PRK11646 multidrug resistance 99.4 4E-11 8.6E-16 120.4 20.3 173 339-523 13-185 (400)
159 PRK09584 tppB putative tripept 99.4 5.3E-11 1.2E-15 122.6 21.1 175 331-515 15-193 (500)
160 TIGR00891 2A0112 putative sial 99.4 2.6E-12 5.6E-17 129.5 10.9 146 130-275 254-401 (405)
161 TIGR00887 2A0109 phosphate:H+ 99.4 3.4E-12 7.3E-17 132.3 11.7 175 120-294 294-493 (502)
162 PRK09952 shikimate transporter 99.4 1E-11 2.2E-16 126.3 14.7 167 125-291 261-434 (438)
163 PRK10207 dipeptide/tripeptide 99.3 6.7E-11 1.4E-15 121.2 20.1 168 336-513 14-184 (489)
164 PRK11010 ampG muropeptide tran 99.3 6.8E-11 1.5E-15 121.7 19.3 156 137-292 246-405 (491)
165 PRK10504 putative transporter; 99.3 1.5E-10 3.2E-15 119.3 21.6 177 336-524 10-186 (471)
166 KOG0569 Permease of the major 99.3 8.4E-12 1.8E-16 123.9 11.3 196 100-296 256-461 (485)
167 TIGR00900 2A0121 H+ Antiporter 99.3 1.1E-10 2.3E-15 115.8 19.2 171 340-521 3-177 (365)
168 TIGR00881 2A0104 phosphoglycer 99.3 1.6E-11 3.4E-16 122.5 11.7 156 117-272 219-379 (379)
169 COG2223 NarK Nitrate/nitrite t 99.3 3.4E-11 7.5E-16 114.7 12.9 175 116-291 220-402 (417)
170 PRK11128 putative 3-phenylprop 99.3 4.7E-11 1E-15 119.3 14.7 154 127-283 218-372 (382)
171 TIGR02332 HpaX 4-hydroxyphenyl 99.3 3.9E-10 8.5E-15 113.7 21.1 175 340-525 12-191 (412)
172 TIGR00769 AAA ADP/ATP carrier 99.3 6.4E-08 1.4E-12 96.9 36.3 273 114-401 7-332 (472)
173 PRK15075 citrate-proton sympor 99.3 3.2E-11 7E-16 122.6 12.5 150 120-269 244-398 (434)
174 PRK14995 methyl viologen resis 99.3 6.9E-10 1.5E-14 114.7 22.4 176 338-525 8-184 (495)
175 PRK10213 nepI ribonucleoside t 99.3 5.3E-10 1.1E-14 112.0 20.7 157 348-516 32-188 (394)
176 TIGR00710 efflux_Bcr_CflA drug 99.3 3E-10 6.6E-15 113.6 18.9 174 340-525 9-182 (385)
177 TIGR01272 gluP glucose/galacto 99.3 1.3E-10 2.8E-15 112.0 15.4 160 116-279 142-304 (310)
178 PF11700 ATG22: Vacuole efflux 99.3 1.6E-10 3.5E-15 116.9 16.7 180 113-293 280-471 (477)
179 PRK12307 putative sialic acid 99.3 1.4E-10 2.9E-15 117.9 16.4 146 132-277 249-395 (426)
180 PF06963 FPN1: Ferroportin1 (F 99.3 2.2E-08 4.9E-13 99.0 31.2 371 115-496 3-416 (432)
181 TIGR00886 2A0108 nitrite extru 99.3 4.2E-10 9.2E-15 111.8 19.6 159 337-505 2-169 (366)
182 PRK10473 multidrug efflux syst 99.3 7.7E-10 1.7E-14 111.0 21.3 179 336-526 3-181 (392)
183 PRK10077 xylE D-xylose transpo 99.2 1.1E-10 2.4E-15 120.4 15.6 167 123-289 280-456 (479)
184 PRK10091 MFS transport protein 99.2 4.7E-10 1E-14 112.1 19.5 177 336-524 3-179 (382)
185 KOG3762 Predicted transporter 99.2 1.5E-10 3.2E-15 113.1 14.9 180 331-522 366-546 (618)
186 PF05977 MFS_3: Transmembrane 99.2 9.1E-11 2E-15 120.0 14.4 158 129-287 233-391 (524)
187 PRK11043 putative transporter; 99.2 5.9E-10 1.3E-14 112.2 20.1 169 342-521 9-179 (401)
188 TIGR00711 efflux_EmrB drug res 99.2 4E-10 8.6E-15 116.6 19.4 174 340-525 6-179 (485)
189 TIGR00792 gph sugar (Glycoside 99.2 2.9E-11 6.2E-16 123.3 10.7 149 119-268 227-383 (437)
190 PRK10406 alpha-ketoglutarate t 99.2 1.3E-10 2.7E-15 118.2 15.0 163 127-290 256-424 (432)
191 TIGR00903 2A0129 major facilit 99.2 6.6E-10 1.4E-14 109.8 19.1 163 350-525 5-167 (368)
192 TIGR00895 2A0115 benzoate tran 99.2 6.7E-11 1.4E-15 118.8 12.3 142 120-262 256-397 (398)
193 KOG2504 Monocarboxylate transp 99.2 1.5E-10 3.3E-15 117.8 14.2 176 114-290 298-476 (509)
194 PRK11902 ampG muropeptide tran 99.2 1.1E-10 2.3E-15 117.6 12.2 151 137-291 233-391 (402)
195 TIGR00882 2A0105 oligosacchari 99.2 1.4E-10 3E-15 116.5 13.1 141 144-285 249-390 (396)
196 PRK11195 lysophospholipid tran 99.2 7.3E-10 1.6E-14 111.0 17.9 163 335-513 2-164 (393)
197 KOG0637 Sucrose transporter an 99.2 7.1E-10 1.5E-14 106.4 16.5 393 114-517 32-490 (498)
198 PF03825 Nuc_H_symport: Nucleo 99.2 2.9E-10 6.3E-15 112.8 14.5 169 119-287 212-392 (400)
199 TIGR00898 2A0119 cation transp 99.2 7.4E-11 1.6E-15 122.6 10.6 151 139-294 348-499 (505)
200 TIGR02718 sider_RhtX_FptX side 99.2 2.8E-10 6E-15 114.1 14.0 155 130-284 224-385 (390)
201 KOG4686 Predicted sugar transp 99.2 4.2E-10 9.1E-15 100.8 12.8 127 139-267 290-416 (459)
202 TIGR00894 2A0114euk Na(+)-depe 99.2 2.2E-10 4.8E-15 117.7 12.9 178 114-292 261-452 (465)
203 PRK11652 emrD multidrug resist 99.2 2.1E-09 4.6E-14 107.9 19.7 174 340-525 12-185 (394)
204 TIGR00712 glpT glycerol-3-phos 99.2 6.4E-10 1.4E-14 113.2 15.8 179 335-524 26-207 (438)
205 TIGR00885 fucP L-fucose:H+ sym 99.2 4.4E-09 9.5E-14 105.7 21.2 171 338-518 5-202 (410)
206 PRK15402 multidrug efflux syst 99.1 4.4E-09 9.5E-14 106.1 20.8 162 352-525 29-190 (406)
207 KOG3098 Uncharacterized conser 99.1 2.8E-08 6E-13 98.1 25.5 316 151-492 51-409 (461)
208 PRK11102 bicyclomycin/multidru 99.1 1.9E-09 4.1E-14 107.6 17.8 162 352-525 7-168 (377)
209 PLN00028 nitrate transmembrane 99.1 4.4E-09 9.6E-14 108.0 20.9 166 345-522 45-218 (476)
210 PRK15403 multidrug efflux syst 99.1 3.8E-09 8.2E-14 106.5 19.7 159 355-525 35-193 (413)
211 KOG4332 Predicted sugar transp 99.1 7.5E-10 1.6E-14 98.3 12.2 317 129-478 52-387 (454)
212 COG2270 Permeases of the major 99.1 7.9E-10 1.7E-14 105.6 13.2 177 115-292 253-431 (438)
213 KOG3574 Acetyl-CoA transporter 99.1 1.2E-08 2.5E-13 95.5 19.6 360 114-498 31-432 (510)
214 PRK15034 nitrate/nitrite trans 99.1 1E-08 2.2E-13 102.6 20.7 149 335-493 33-185 (462)
215 TIGR00896 CynX cyanate transpo 99.1 1.8E-09 3.9E-14 106.8 15.0 141 125-267 208-350 (355)
216 PF06813 Nodulin-like: Nodulin 99.1 1.6E-08 3.6E-13 92.3 19.9 164 126-292 14-184 (250)
217 PRK06814 acylglycerophosphoeth 99.1 5.5E-09 1.2E-13 119.5 20.1 172 331-510 6-182 (1140)
218 TIGR00926 2A1704 Peptide:H+ sy 99.1 8.5E-08 1.8E-12 100.6 26.7 152 137-288 11-180 (654)
219 KOG3764 Vesicular amine transp 99.1 9.8E-10 2.1E-14 103.6 10.7 153 367-530 101-254 (464)
220 PRK10133 L-fucose transporter; 99.1 2.6E-08 5.6E-13 101.1 21.9 149 337-495 27-177 (438)
221 PF01306 LacY_symp: LacY proto 99.0 1E-09 2.2E-14 107.1 10.7 158 133-291 243-401 (412)
222 PF13347 MFS_2: MFS/sugar tran 99.0 3.4E-09 7.4E-14 107.6 14.8 152 116-268 227-387 (428)
223 PF02487 CLN3: CLN3 protein; 99.0 1.9E-07 4.1E-12 90.8 25.5 324 152-493 62-393 (402)
224 PRK08633 2-acyl-glycerophospho 99.0 1.1E-08 2.3E-13 117.4 19.7 158 331-497 4-165 (1146)
225 KOG1330 Sugar transporter/spin 99.0 4.1E-10 8.8E-15 108.4 5.6 178 339-527 36-213 (493)
226 KOG0253 Synaptic vesicle trans 99.0 2E-09 4.3E-14 100.2 9.6 132 159-293 391-522 (528)
227 TIGR00806 rfc RFC reduced fola 99.0 3.5E-08 7.5E-13 97.2 18.5 133 355-499 44-177 (511)
228 PRK09848 glucuronide transport 98.9 4.8E-09 1E-13 107.2 11.5 151 118-268 232-391 (448)
229 TIGR00805 oat sodium-independe 98.9 7.9E-09 1.7E-13 109.1 11.8 152 362-522 58-280 (633)
230 KOG3810 Micronutrient transpor 98.9 2.9E-08 6.3E-13 91.8 13.7 373 142-527 34-425 (433)
231 TIGR01301 GPH_sucrose GPH fami 98.9 8.5E-08 1.8E-12 96.7 18.5 182 337-527 5-222 (477)
232 TIGR00901 2A0125 AmpG-related 98.9 6.2E-08 1.3E-12 95.8 17.5 166 353-524 5-179 (356)
233 PF00083 Sugar_tr: Sugar (and 98.9 3.1E-11 6.8E-16 123.5 -6.4 182 112-295 251-442 (451)
234 PRK10429 melibiose:sodium symp 98.9 5.5E-09 1.2E-13 107.4 10.2 153 116-268 233-396 (473)
235 TIGR00880 2_A_01_02 Multidrug 98.9 2.7E-08 5.7E-13 83.6 12.3 134 378-522 4-137 (141)
236 COG2807 CynX Cyanate permease 98.9 8E-08 1.7E-12 90.1 15.8 166 122-289 216-384 (395)
237 COG3104 PTR2 Dipeptide/tripept 98.8 7.6E-08 1.7E-12 94.3 15.3 179 335-522 20-205 (498)
238 PRK09669 putative symporter Ya 98.8 2.3E-08 5.1E-13 102.0 12.1 141 128-268 243-391 (444)
239 KOG2532 Permease of the major 98.8 1.1E-08 2.5E-13 102.9 9.5 179 114-293 258-450 (466)
240 KOG2615 Permease of the major 98.8 2.1E-08 4.6E-13 94.2 10.3 143 352-505 44-193 (451)
241 PTZ00207 hypothetical protein; 98.8 7.3E-07 1.6E-11 92.0 21.2 162 349-524 40-206 (591)
242 COG0477 ProP Permeases of the 98.8 1.5E-07 3.3E-12 90.5 15.4 161 121-281 9-176 (338)
243 KOG0252 Inorganic phosphate tr 98.8 1.8E-08 3.9E-13 97.0 7.7 183 114-297 304-505 (538)
244 COG0738 FucP Fucose permease [ 98.7 1.3E-06 2.8E-11 83.4 19.0 159 353-520 29-207 (422)
245 COG2211 MelB Na+/melibiose sym 98.7 1.2E-07 2.5E-12 93.8 11.7 154 114-267 236-398 (467)
246 PF03219 TLC: TLC ATP/ADP tran 98.7 3.3E-05 7.2E-10 78.1 29.1 277 113-401 23-348 (491)
247 KOG3762 Predicted transporter 98.7 4.2E-08 9.1E-13 96.2 8.0 167 122-289 379-546 (618)
248 COG3202 ATP/ADP translocase [E 98.7 0.00017 3.8E-09 70.9 32.1 276 112-400 25-350 (509)
249 TIGR00788 fbt folate/biopterin 98.7 7.2E-08 1.6E-12 98.6 8.8 151 141-291 280-447 (468)
250 PRK11462 putative transporter; 98.6 2.3E-06 5.1E-11 87.4 17.9 155 341-499 14-174 (460)
251 PF13000 Acatn: Acetyl-coenzym 98.6 8.5E-06 1.8E-10 80.0 20.2 374 117-497 3-467 (544)
252 KOG1237 H+/oligopeptide sympor 98.6 3.4E-05 7.4E-10 79.7 25.4 155 133-287 57-242 (571)
253 PF06609 TRI12: Fungal trichot 98.6 5.5E-06 1.2E-10 85.2 19.4 179 333-525 37-219 (599)
254 PF03209 PUCC: PUCC protein; 98.5 1.9E-06 4.2E-11 83.0 14.7 150 140-289 235-397 (403)
255 KOG0254 Predicted transporter 98.5 1.2E-06 2.7E-11 90.9 13.5 183 112-295 293-489 (513)
256 PF05978 UNC-93: Ion channel r 98.4 6.4E-06 1.4E-10 69.5 12.8 117 145-263 33-149 (156)
257 KOG2533 Permease of the major 98.3 1.1E-05 2.4E-10 81.8 14.7 150 365-525 74-229 (495)
258 PF12832 MFS_1_like: MFS_1 lik 98.3 1.6E-06 3.5E-11 63.6 5.9 72 118-189 4-75 (77)
259 PF06779 DUF1228: Protein of u 98.3 1.5E-06 3.3E-11 64.1 5.8 76 126-202 4-79 (85)
260 TIGR00926 2A1704 Peptide:H+ sy 98.3 5.9E-05 1.3E-09 79.5 18.5 166 351-524 2-183 (654)
261 PF05631 DUF791: Protein of un 98.2 0.00098 2.1E-08 63.6 22.6 153 365-528 62-221 (354)
262 KOG0255 Synaptic vesicle trans 98.1 3.7E-05 7.9E-10 80.3 13.4 140 365-518 111-250 (521)
263 TIGR00939 2a57 Equilibrative N 98.1 0.0008 1.7E-08 67.7 22.2 58 433-490 370-427 (437)
264 PF06813 Nodulin-like: Nodulin 98.1 0.0003 6.6E-09 64.5 17.2 139 347-497 13-157 (250)
265 KOG1479 Nucleoside transporter 98.0 0.00023 5E-09 68.9 16.0 358 115-495 19-402 (406)
266 PF00854 PTR2: POT family; In 97.9 6.4E-05 1.4E-09 74.7 11.1 110 180-289 2-122 (372)
267 PF12832 MFS_1_like: MFS_1 lik 97.9 7.6E-05 1.6E-09 54.8 8.5 61 341-402 5-65 (77)
268 KOG2325 Predicted transporter/ 97.8 0.00018 3.9E-09 71.8 11.2 182 336-526 34-232 (488)
269 KOG3880 Predicted small molecu 97.7 0.00019 4.2E-09 65.8 9.4 324 152-491 65-398 (409)
270 PF02487 CLN3: CLN3 protein; 97.7 0.00085 1.9E-08 65.7 14.1 113 147-263 279-395 (402)
271 KOG2816 Predicted transporter 97.7 0.00093 2E-08 67.5 14.7 133 382-528 72-204 (463)
272 PF03092 BT1: BT1 family; Int 97.7 0.0014 3E-08 66.4 15.8 160 359-524 12-176 (433)
273 KOG2563 Permease of the major 97.6 0.0015 3.3E-08 63.7 14.1 128 360-498 68-203 (480)
274 PF07672 MFS_Mycoplasma: Mycop 97.5 0.005 1.1E-07 55.9 15.2 98 235-346 2-104 (267)
275 PRK03612 spermidine synthase; 97.3 0.029 6.4E-07 58.0 19.4 156 344-506 22-181 (521)
276 PRK03612 spermidine synthase; 97.1 0.01 2.3E-07 61.2 14.7 156 122-278 22-185 (521)
277 KOG3097 Predicted membrane pro 97.1 0.078 1.7E-06 49.8 18.4 72 159-232 68-139 (390)
278 PF06963 FPN1: Ferroportin1 (F 97.0 0.14 3.1E-06 51.2 20.6 184 336-522 2-199 (432)
279 PF05978 UNC-93: Ion channel r 96.9 0.084 1.8E-06 44.7 15.5 109 377-496 42-150 (156)
280 KOG4830 Predicted sugar transp 96.8 0.00074 1.6E-08 60.4 2.1 154 327-488 192-348 (412)
281 TIGR00939 2a57 Equilibrative N 96.6 0.023 5.1E-07 57.3 12.0 108 152-261 310-430 (437)
282 COG0477 ProP Permeases of the 96.6 0.15 3.2E-06 48.3 17.4 150 350-509 16-171 (338)
283 PF00854 PTR2: POT family; In 96.3 0.038 8.1E-07 54.9 11.2 86 436-522 34-122 (372)
284 KOG3098 Uncharacterized conser 96.3 0.065 1.4E-06 53.7 12.4 145 117-262 243-411 (461)
285 KOG3626 Organic anion transpor 96.2 0.015 3.3E-07 61.0 8.0 164 354-526 114-346 (735)
286 TIGR00769 AAA ADP/ATP carrier 96.1 0.41 8.9E-06 48.6 17.6 37 459-495 153-189 (472)
287 PF03137 OATP: Organic Anion T 96.0 0.001 2.2E-08 68.9 -1.6 166 351-525 17-252 (539)
288 PF01770 Folate_carrier: Reduc 95.9 0.59 1.3E-05 46.2 16.9 156 355-521 22-180 (412)
289 PF06779 DUF1228: Protein of u 95.7 0.11 2.4E-06 38.6 8.4 51 349-400 5-55 (85)
290 KOG0637 Sucrose transporter an 94.2 0.073 1.6E-06 52.4 5.0 153 336-493 32-201 (498)
291 PF01733 Nucleoside_tran: Nucl 93.9 0.019 4.2E-07 55.2 0.5 107 153-260 186-305 (309)
292 PF01733 Nucleoside_tran: Nucl 93.6 0.021 4.6E-07 55.0 0.3 58 434-491 247-304 (309)
293 KOG3574 Acetyl-CoA transporter 93.6 0.95 2.1E-05 43.8 11.0 145 336-491 31-189 (510)
294 KOG4332 Predicted sugar transp 92.7 0.27 6E-06 44.9 5.8 153 362-525 62-222 (454)
295 KOG1237 H+/oligopeptide sympor 92.6 3.8 8.3E-05 42.9 14.9 173 340-521 41-243 (571)
296 KOG2601 Iron transporter [Inor 92.4 0.5 1.1E-05 45.4 7.3 165 117-281 30-217 (503)
297 KOG1479 Nucleoside transporter 90.7 14 0.00031 36.5 15.5 65 336-402 18-82 (406)
298 PF07672 MFS_Mycoplasma: Mycop 89.5 4.5 9.7E-05 37.2 10.3 107 152-258 144-261 (267)
299 PF13000 Acatn: Acetyl-coenzym 89.3 0.86 1.9E-05 45.8 6.1 67 204-270 406-472 (544)
300 KOG3880 Predicted small molecu 88.4 2.3 5E-05 40.0 7.7 135 123-262 256-401 (409)
301 PRK00293 dipZ thiol:disulfide 84.1 61 0.0013 34.3 18.8 34 368-401 321-354 (571)
302 KOG2601 Iron transporter [Inor 83.3 26 0.00057 34.2 12.1 68 336-403 27-94 (503)
303 KOG1307 K+-dependent Ca2+/Na+ 82.5 8.2 0.00018 38.1 8.6 41 137-179 447-487 (588)
304 PF06912 DUF1275: Protein of u 80.3 39 0.00084 30.2 12.1 42 235-277 158-199 (209)
305 COG4262 Predicted spermidine s 79.0 65 0.0014 31.2 17.8 148 133-283 26-184 (508)
306 TIGR00844 c_cpa1 na(+)/h(+) an 77.7 1.1E+02 0.0025 33.3 25.8 33 247-279 109-141 (810)
307 COG5336 Uncharacterized protei 76.3 11 0.00023 29.1 5.8 35 466-500 37-71 (116)
308 TIGR00927 2A1904 K+-dependent 74.5 12 0.00026 40.9 7.7 50 133-184 952-1001(1096)
309 PF02990 EMP70: Endomembrane p 72.7 83 0.0018 32.8 13.5 32 13-44 17-48 (521)
310 COG5336 Uncharacterized protei 72.7 20 0.00044 27.7 6.5 18 383-400 53-70 (116)
311 PF02535 Zip: ZIP Zinc transpo 70.3 1E+02 0.0022 29.5 14.5 28 206-233 263-291 (317)
312 PF07857 DUF1632: CEO family ( 68.7 99 0.0021 28.6 12.9 25 342-366 184-208 (254)
313 PF05255 UPF0220: Uncharacteri 66.6 51 0.0011 28.2 8.6 61 231-291 14-80 (166)
314 PRK10263 DNA translocase FtsK; 64.5 93 0.002 35.9 12.2 19 481-499 141-159 (1355)
315 TIGR03644 marine_trans_1 proba 63.8 1.7E+02 0.0036 29.4 16.6 25 379-403 243-267 (404)
316 KOG3810 Micronutrient transpor 63.3 66 0.0014 31.3 9.3 96 152-248 274-371 (433)
317 PF01102 Glycophorin_A: Glycop 58.5 8.6 0.00019 30.8 2.4 19 512-530 78-96 (122)
318 COG4262 Predicted spermidine s 58.3 1.9E+02 0.0041 28.3 13.8 56 438-495 108-163 (508)
319 KOG2765 Predicted membrane pro 53.9 55 0.0012 31.8 7.2 16 173-188 208-223 (416)
320 PF12805 FUSC-like: FUSC-like 53.3 55 0.0012 31.0 7.4 13 435-447 23-35 (284)
321 TIGR00836 amt ammonium transpo 51.1 2.7E+02 0.0059 27.9 14.0 26 379-404 229-254 (403)
322 PF02554 CstA: Carbon starvati 49.4 2.7E+02 0.0058 27.4 17.5 35 230-269 48-83 (376)
323 PF12805 FUSC-like: FUSC-like 49.4 76 0.0016 30.0 7.7 34 184-217 4-37 (284)
324 PRK10263 DNA translocase FtsK; 48.7 45 0.00097 38.3 6.6 19 250-268 142-160 (1355)
325 KOG4830 Predicted sugar transp 48.0 37 0.0008 31.4 4.9 131 100-234 191-324 (412)
326 PF11299 DUF3100: Protein of u 47.9 25 0.00054 31.6 3.8 95 167-262 125-229 (241)
327 PF00909 Ammonium_transp: Ammo 47.5 3.1E+02 0.0066 27.5 13.6 34 235-268 107-140 (399)
328 PF03547 Mem_trans: Membrane t 45.6 3.1E+02 0.0068 27.1 13.2 231 24-258 144-384 (385)
329 PTZ00101 rhomboid-1 protease; 45.4 2.5E+02 0.0053 26.5 10.1 35 159-193 118-153 (278)
330 COG0701 Predicted permeases [G 44.9 2.9E+02 0.0064 26.6 11.8 27 353-379 210-237 (317)
331 TIGR01478 STEVOR variant surfa 44.6 24 0.00051 32.7 3.2 39 494-533 254-292 (295)
332 PTZ00370 STEVOR; Provisional 43.1 1.1E+02 0.0024 28.6 7.1 41 491-532 247-287 (296)
333 PF03596 Cad: Cadmium resistan 42.3 2.2E+02 0.0048 25.0 8.7 29 256-284 43-71 (191)
334 PF06645 SPC12: Microsomal sig 41.2 73 0.0016 23.2 4.7 32 485-519 21-52 (76)
335 PF03219 TLC: TLC ATP/ADP tran 40.1 4.4E+02 0.0096 27.3 25.4 50 465-515 313-362 (491)
336 KOG0055 Multidrug/pheromone ex 38.8 6.9E+02 0.015 29.1 19.3 48 351-398 904-951 (1228)
337 PF05961 Chordopox_A13L: Chord 37.6 58 0.0013 22.7 3.4 24 505-528 5-28 (68)
338 PHA03049 IMV membrane protein; 37.1 65 0.0014 22.4 3.5 23 506-528 6-28 (68)
339 PF04226 Transgly_assoc: Trans 36.1 49 0.0011 21.5 2.9 13 482-494 6-18 (48)
340 PF11833 DUF3353: Protein of u 32.5 3.5E+02 0.0076 23.9 8.6 31 234-264 136-166 (194)
341 PF11947 DUF3464: Protein of u 31.7 3.2E+02 0.0069 23.1 8.1 27 460-486 119-145 (153)
342 TIGR01667 YCCS_YHJK integral m 31.5 2E+02 0.0043 31.3 8.2 21 431-451 77-97 (701)
343 PF11947 DUF3464: Protein of u 31.5 51 0.0011 27.7 2.9 47 205-254 99-145 (153)
344 PF12273 RCR: Chitin synthesis 30.3 21 0.00045 29.2 0.5 19 269-287 1-19 (130)
345 TIGR01666 YCCS hypothetical me 30.1 2.5E+02 0.0054 30.6 8.6 22 430-451 76-97 (704)
346 PF02694 UPF0060: Uncharacteri 29.9 95 0.0021 24.1 3.9 48 149-196 54-101 (107)
347 PRK01766 multidrug efflux prot 29.9 6E+02 0.013 25.7 28.8 10 169-178 72-81 (456)
348 KOG2881 Predicted membrane pro 29.6 4.6E+02 0.01 24.3 9.9 13 266-278 127-139 (294)
349 PTZ00370 STEVOR; Provisional 29.2 56 0.0012 30.4 3.1 38 254-291 243-280 (296)
350 KOG1278 Endosomal membrane pro 29.1 1.9E+02 0.0041 29.9 6.9 34 366-399 352-386 (628)
351 COG3619 Predicted membrane pro 29.1 4.4E+02 0.0096 23.9 16.0 26 476-501 173-198 (226)
352 COG2233 UraA Xanthine/uracil p 27.8 6.5E+02 0.014 25.6 10.4 51 344-394 21-71 (451)
353 KOG1277 Endosomal membrane pro 26.9 1.5E+02 0.0034 29.7 5.7 32 151-182 325-360 (593)
354 PF08566 Pam17: Mitochondrial 26.3 1.2E+02 0.0026 26.0 4.3 16 99-114 23-38 (173)
355 PF06638 Strabismus: Strabismu 26.2 7.3E+02 0.016 25.5 10.7 12 201-212 179-190 (505)
356 PF06123 CreD: Inner membrane 25.7 2.9E+02 0.0062 28.0 7.6 24 220-243 362-385 (430)
357 PF07857 DUF1632: CEO family ( 25.6 5.5E+02 0.012 23.8 9.0 21 504-524 116-136 (254)
358 PF09527 ATPase_gene1: Putativ 25.5 1.8E+02 0.004 19.3 4.4 37 157-193 8-45 (55)
359 KOG1397 Ca2+/H+ antiporter VCX 25.5 1.8E+02 0.0039 28.5 5.8 39 116-154 292-330 (441)
360 PRK02237 hypothetical protein; 25.1 1.4E+02 0.0031 23.3 4.1 47 150-196 57-103 (109)
361 KOG3814 Signaling protein van 24.7 6.8E+02 0.015 24.6 12.1 12 202-213 204-215 (531)
362 TIGR01667 YCCS_YHJK integral m 24.5 3.5E+02 0.0076 29.5 8.5 49 169-217 43-95 (701)
363 TIGR03173 pbuX xanthine permea 24.5 7.2E+02 0.016 24.9 11.5 41 353-393 9-49 (406)
364 TIGR01666 YCCS hypothetical me 24.4 2.3E+02 0.0049 30.9 7.1 48 170-217 44-95 (704)
365 PF01914 MarC: MarC family int 23.8 5.2E+02 0.011 23.0 12.6 52 229-280 28-80 (203)
366 COG0387 ChaA Ca2+/H+ antiporte 22.8 6.4E+02 0.014 24.8 8.9 39 118-156 225-263 (368)
367 COG2962 RarD Predicted permeas 22.7 6.6E+02 0.014 23.8 11.2 62 330-399 63-124 (293)
368 TIGR03173 pbuX xanthine permea 22.6 5.8E+02 0.013 25.6 9.4 101 137-238 15-116 (406)
369 PF13940 Ldr_toxin: Toxin Ldr, 22.6 1.3E+02 0.0028 17.7 2.6 20 379-398 15-34 (35)
370 KOG1277 Endosomal membrane pro 22.1 1.4E+02 0.0031 29.9 4.5 23 381-403 336-358 (593)
371 PRK11715 inner membrane protei 22.0 3.7E+02 0.0081 27.2 7.6 23 221-243 369-391 (436)
372 PF02990 EMP70: Endomembrane p 20.9 4.5E+02 0.0097 27.5 8.3 36 147-182 291-330 (521)
373 PF12676 DUF3796: Protein of u 20.7 4.5E+02 0.0097 21.1 7.6 26 466-491 52-77 (118)
374 PF07760 DUF1616: Protein of u 20.7 7.2E+02 0.016 23.5 9.0 56 206-262 22-77 (287)
375 PF11151 DUF2929: Protein of u 20.6 2.9E+02 0.0062 18.8 5.7 43 250-292 13-55 (57)
376 KOG1307 K+-dependent Ca2+/Na+ 20.4 3.7E+02 0.0079 27.3 6.8 6 101-106 387-392 (588)
377 PHA02902 putative IMV membrane 20.4 1.7E+02 0.0036 20.3 3.2 25 504-528 5-29 (70)
378 PF13386 DsbD_2: Cytochrome C 20.3 6E+02 0.013 22.3 15.3 35 368-402 146-180 (199)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-42 Score=324.83 Aligned_cols=408 Identities=16% Similarity=0.182 Sum_probs=329.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
|+++++.+.+.|...++.+.+++.+.|.+.++.++|.+|+|++.++++++|.++..+.|.++||.+.|..+.+++++.++
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai 106 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHH
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhH--HHhccccchh
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA--PPIIENLGWE 269 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~gw~ 269 (535)
..++++ ++++.+.+.++.++.|++.|..+|.+...+..|++++|||+..++++.+-++|+.+.|++. +++..+.+||
T Consensus 107 ~nil~G-fs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~ 185 (448)
T COG2271 107 VNILFG-FSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWR 185 (448)
T ss_pred HHHHHh-hhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchh
Confidence 999987 5668899999999999999999999999999999999999999999999999999999999 8999889999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhc-cCCCCCcHHHhhhcHHHHHHHHHHHHH
Q 009409 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMG-ESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (535)
Q Consensus 270 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (535)
..|++.++++++..++.+++-++.|+...-++.++-+.+..+.. .+.++.+ .+.++.-++.+++||.+|.+.+..++.
T Consensus 186 ~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~-~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfv 264 (448)
T COG2271 186 AAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIY-EEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFV 264 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhh-hhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 99999999998876666666555544332222211111111110 0000000 111223456789999999999999999
Q ss_pred hhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHh
Q 009409 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS 428 (535)
Q Consensus 349 ~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (535)
...-+++..|.|.|+.|..|+|...++...+++-+++++|.+++|+++||+.+.+ |.....+..+...+++...
T Consensus 265 YivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr------R~p~~~i~~~~i~~~~~~~ 338 (448)
T COG2271 265 YVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR------RGPMALIFMLLITASLVLY 338 (448)
T ss_pred HHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc------cchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999997442 2223333333334444444
Q ss_pred hhcCCC-cHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhh-hhhHHHHHHHHHhcccCcchHHHH
Q 009409 429 SIDLGL-PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAV-PGIVGVALTGYLLDSTHSWSMSLF 506 (535)
Q Consensus 429 ~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l-g~~igp~i~G~l~~~~g~~~~~~~ 506 (535)
...++. .....+.++++|+...+..........+..|++..|++.|+...++++ |.+.+....|++.|.+| |...|+
T Consensus 339 w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~Fi 417 (448)
T COG2271 339 WLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG-WDGGFI 417 (448)
T ss_pred HcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC-CcchHH
Confidence 433333 345556666777777666666666677778889999999999999999 99999999999999975 999998
Q ss_pred HHHHHHHHHHHhhhhhccCCCC
Q 009409 507 APSIFFYLTGTIVWLAFASSKP 528 (535)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~ 528 (535)
+..+..+++.+++....+.+++
T Consensus 418 ~~~~~a~l~~lll~~~~~~~~~ 439 (448)
T COG2271 418 VLSIAALLAILLLLPVWNAEER 439 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhcch
Confidence 8888777777766666654444
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.7e-38 Score=299.15 Aligned_cols=378 Identities=20% Similarity=0.262 Sum_probs=308.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
..+..+.++.|............+|++.+|+|+|..+.|++.++|.+++.++.++...+.||+.||++++..+.++.++.
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n 92 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSN 92 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Confidence 55667778888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHH
Q 009409 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (535)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 273 (535)
++. .+++||+.+++.|++.|+..|.+++...++..+..|+++|++++++...+..++.++|.+++.++.+.+|||+.|+
T Consensus 93 ~l~-alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~ 171 (394)
T COG2814 93 LLS-ALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFL 171 (394)
T ss_pred HHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHH
Confidence 776 5899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhh
Q 009409 274 IFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (535)
Q Consensus 274 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (535)
+.++++++.++. +..+|+++.++......+ ...+.+|+|.++...+..++...+.
T Consensus 172 ~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~~------------------------~~~~~l~~p~v~~~l~~t~l~~~g~ 227 (394)
T COG2814 172 AIAVLALLALLLLWKLLPPSEISGSLPGPLR------------------------TLLRLLRRPGVLLGLLATFLFMTGH 227 (394)
T ss_pred HHHHHHHHHHHHHHHhCCCccCCCCCCcchh------------------------HHHHHhcCchHHHHHHHHHHHHcch
Confidence 999998776544 445551111111111000 1257889999999999999999999
Q ss_pred HHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcC
Q 009409 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL 432 (535)
Q Consensus 353 ~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (535)
+..++|+..++++..|++....+++...+++++++|+.++|++.|| +.+ +.. ........+.+..+....
T Consensus 228 F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~--------~~l-~~~~~l~a~~~l~l~~~~ 297 (394)
T COG2814 228 FALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR--------RAL-IAALLLLALALLALTFTG 297 (394)
T ss_pred hhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch--------hHH-HHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999 543 222 223233333333333334
Q ss_pred CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHH
Q 009409 433 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF 512 (535)
Q Consensus 433 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~ 512 (535)
.+........++.++..............+ ..||.+..+.+++....++|..+|..++|.++|++ ++....+..+++.
T Consensus 298 ~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-g~~~~~~~~a~l~ 375 (394)
T COG2814 298 ASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-GYAATGWVGAALL 375 (394)
T ss_pred chHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHH
Confidence 444444444555555554444444444444 66899999999999999999999999999999997 4888888877777
Q ss_pred HHHHHhhhhhccCCCC
Q 009409 513 YLTGTIVWLAFASSKP 528 (535)
Q Consensus 513 ~~~~~~~~~~~~~~~~ 528 (535)
+++..+.+...++.++
T Consensus 376 ~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 376 LLALLLALLSARKDRR 391 (394)
T ss_pred HHHHHHHHHHHhcccc
Confidence 6666666555554444
No 3
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.9e-37 Score=317.89 Aligned_cols=422 Identities=25% Similarity=0.401 Sum_probs=311.6
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhhhc----------------------ccCCCccchhHHHHHHHHHHHhh
Q 009409 108 NIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSH----------------------RFGWNSSVAGLVQSSFFWGYALS 165 (535)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~g~s~~~~~~~~s~~~~~~~~~ 165 (535)
..+.|+.+..++++.+...+.++.+++...+.+.+ ++|++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 34456788888888888999999999999888776 88999999999999999999999
Q ss_pred hccchhhhcccCCchhhHHHHHHHHHHHHHHHhh-hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHH
Q 009409 166 QLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFV 244 (535)
Q Consensus 166 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 244 (535)
++++|+++||+|+|+++..+.++++++.++.... ..+++.+++.|+++|++.+...+....++++++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999999888887765432 344678999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHhhhHHHhccc-cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccC
Q 009409 245 FGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGES 323 (535)
Q Consensus 245 ~~~~~~g~~~g~~~~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (535)
..+..+|.+++|++++++.+. .|||+.|++.+++.++..+.++.+++++++......++++.. .++ ...++..+.
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-i~~---~~~~~~~~~ 248 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKY-INS---SLQGQKGST 248 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHH-HHh---hcccccCCC
Confidence 999999999999999999988 499999999999887776666655544333222111111100 000 000001111
Q ss_pred CCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC
Q 009409 324 LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (535)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (535)
..+.+++++++++.+|...+..++.....+.+.+|+|.|+++.+|++..+.+++.+++.++.+++.++.|+++||+++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~ 328 (465)
T TIGR00894 249 RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSK 328 (465)
T ss_pred CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22446899999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCchhH-HHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhh
Q 009409 404 VETTMV-RKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAV 482 (535)
Q Consensus 404 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l 482 (535)
...... ++....+.....++...............++.+.+.+.+ .............+..|+.+|.+.|+.++.+.+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l 407 (465)
T TIGR00894 329 TLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAV-SSGPLAGVLINSLDLAPRFLGFIKGITGLPGFI 407 (465)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH-hhhhhhhhhhchhhcChhHHHHHHHHHHHHHHH
Confidence 433221 122222222222222222221122222222223222222 222222232333445677999999999999999
Q ss_pred hhhHHHHHHHHHhccc--CcchHHHHHHHHHHHHHHHhhhhhccCCCCCCCCCCC
Q 009409 483 PGIVGVALTGYLLDST--HSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 535 (535)
Q Consensus 483 g~~igp~i~G~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (535)
|+.++|.+.|.+.+.. ++|...|.+.++..++..++ +....+.++++|+++|
T Consensus 408 ~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~-~~~~~~~~~~~w~~~~ 461 (465)
T TIGR00894 408 GGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIF-YLIFGSAERQDWAKEE 461 (465)
T ss_pred HHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHH-eeeeecceecCCCCCc
Confidence 9999999999998754 45888888877666555444 4455566667766543
No 4
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.2e-38 Score=326.35 Aligned_cols=399 Identities=12% Similarity=0.067 Sum_probs=291.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
.+.++.++++.+++.++++.++++..|.+.+++|++..+.|++.+++.+++.++++++|+++||+|||+++.++.+++++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 34567788888999999999999999999999999999999999999999999999999999999999999998888877
Q ss_pred HHHHHHhh----hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc-
Q 009409 192 ATALLPLL----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL- 266 (535)
Q Consensus 192 ~~~~~~~~----~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~- 266 (535)
+.++.+.. +++++.++++|++.|++.+...|....++++++|+++|++++|++..+.++|.+++++++.++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~ 186 (467)
T PRK09556 107 CMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF 186 (467)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc
Confidence 77665432 5778999999999999999999999999999999999999999999999999999999988776643
Q ss_pred --chhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHh-ccCCC-CC-cHHHhhhcHHHHHH
Q 009409 267 --GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEM-GESLK-DV-PWKAIFRSKAVWAM 341 (535)
Q Consensus 267 --gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~~~~~~~ 341 (535)
+||..|.+.+++.++..+..+++.++++++.....+++ ... +....+.++. +++.. .. ..+..+++|.+|..
T Consensus 187 ~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 263 (467)
T PRK09556 187 DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE-IFG--EPISEEDKETESTDMTKWQIFVEYVLKNPVIWLL 263 (467)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh-ccc--CccchhhhccccccCcHHHHHHHHHHcChHHHHH
Confidence 69999998888776655444444332222211111110 000 0000000000 00000 01 12337899999999
Q ss_pred HHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHH
Q 009409 342 IYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSP 421 (535)
Q Consensus 342 ~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 421 (535)
.+..++.....++...|+|.|+++.+|++..++++......++.+++.++.|+++||+++|+. ..........
T Consensus 264 ~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~-------~~~~~~~~~~ 336 (467)
T PRK09556 264 CFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA-------LVACIALALI 336 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch-------HHHHHHHHHH
Confidence 999888888888899999999998899999999999999999999999999999999987622 1111111111
Q ss_pred HHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhh-hhhHHHHHHHHHhc----
Q 009409 422 AVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAV-PGIVGVALTGYLLD---- 496 (535)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l-g~~igp~i~G~l~~---- 496 (535)
...+... ....+.....+..++.|+..............+..|++.+|++.|+.+..+++ |++++|.+.|++.|
T Consensus 337 ~~~~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~ 415 (467)
T PRK09556 337 IFTLGVY-QHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKN 415 (467)
T ss_pred HHHHHHH-HhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccc
Confidence 1111111 11223333334444555433222222224455778899999999999999997 77999999999999
Q ss_pred --------ccCcchHHHHHHHHHHHHHHHhhhhh
Q 009409 497 --------STHSWSMSLFAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 497 --------~~g~~~~~~~~~~~~~~~~~~~~~~~ 522 (535)
.. +|...|.+.+++.+++.+..+..
T Consensus 416 g~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 416 GTPIFGYTLT-GWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred cccccccccc-ChHHHHHHHHHHHHHHHHHHHHH
Confidence 44 48999988777666655554433
No 5
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.6e-37 Score=314.92 Aligned_cols=406 Identities=15% Similarity=0.146 Sum_probs=294.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
+++++...++.++..+++...++..+|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++.++.+++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 44666677788888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHH
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (535)
+.++.+ .+++++.+++.|++.|++.+...+...+++.+++++++|++++++++.+..+|.+++|++++++.+.+|||+.
T Consensus 101 ~~~~~~-~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~ 179 (434)
T PRK11663 101 INILFG-FSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYG 179 (434)
T ss_pred HHHHHH-HHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 887765 5677889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCC-CcH-HHhhhcHHHHHHHHHHHHH
Q 009409 272 FYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKD-VPW-KAIFRSKAVWAMIYAHFCG 348 (535)
Q Consensus 272 f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~l~~~~~ 348 (535)
|++.+++.++.. +..+.++++++........+.+... .+ ...+...+..+. ..+ ...++++.+|.+.+..++.
T Consensus 180 f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (434)
T PRK11663 180 MMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDA-LE---LAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLV 255 (434)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccc-cc---cchhccccCCChhhhHHHHHhcChHHHHHHHHHHHH
Confidence 999888765443 3344455543221111100000000 00 000000000000 111 2366789999888888877
Q ss_pred hhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHh
Q 009409 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS 428 (535)
Q Consensus 349 ~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (535)
....+.+.+|+|.|+++.+|++..+++...+...+++++++++.|+++||+.+++... .......+.......+..
T Consensus 256 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~---~~~~~~~~~~~~~~~~~~- 331 (434)
T PRK11663 256 YVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGP---MNLIFAAGILLSVGSLWL- 331 (434)
T ss_pred HHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccH---HHHHHHHHHHHHHHHHHH-
Confidence 7778888899999998788999999999999999999999999999999995432111 111111111111111111
Q ss_pred hhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHH
Q 009409 429 SIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAP 508 (535)
Q Consensus 429 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~ 508 (535)
.......+.....+.+|++.............+..++++++++.|+.++..++|+.++|.+.|++.|+.| |...|.+.
T Consensus 332 -~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~~~~f~~~ 409 (434)
T PRK11663 332 -MPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-WTGFFVVI 409 (434)
T ss_pred -cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-cHHHHHHH
Confidence 1122222222222333332221111222334555778999999999999999999999999999999986 99999888
Q ss_pred HHHHHHHHHhhhhhccCCCC
Q 009409 509 SIFFYLTGTIVWLAFASSKP 528 (535)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~ 528 (535)
+++.++.++..+...+++++
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK11663 410 SIAAGISALLLLPFLNAQAP 429 (434)
T ss_pred HHHHHHHHHHHHHHHhhhch
Confidence 88777766655555544443
No 6
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9e-37 Score=304.08 Aligned_cols=389 Identities=34% Similarity=0.622 Sum_probs=326.5
Q ss_pred hcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHhhhccCC
Q 009409 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGV 219 (535)
Q Consensus 141 ~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~G~~~~~ 219 (535)
..+++.|..+.+++.+.++.|+.+++++.|+++||+|.|+++..+.++.++++++....++. ++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 34688999999999999999999999999999999999999999999999999988766533 35789999999999999
Q ss_pred chhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc-cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 009409 220 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 298 (535)
Q Consensus 220 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (535)
.+|....+.+.|.|++||++..++..++..+|.+++.+++|++.+. +||+++|++.++++++..++++.+..+++.+.+
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999988888887776666554
Q ss_pred CCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHH
Q 009409 299 TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS 378 (535)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~ 378 (535)
...++|.....+. ..++..++..+.||+++++++.+|...+..++...+.+.+..++|+|+.+.+|++..+.|++.
T Consensus 225 ~is~~El~~I~~~----k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~s 300 (466)
T KOG2532|consen 225 NISEKELKYIEKG----KSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLS 300 (466)
T ss_pred CCCHHHHHHHHhc----ccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHH
Confidence 4444333211111 011111112578999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhh
Q 009409 379 ILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLY 458 (535)
Q Consensus 379 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 458 (535)
+++.+...+..+++|.++||+..|+......||....++....+++++..........+..+.++.+..+..++......
T Consensus 301 alP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~ 380 (466)
T KOG2532|consen 301 ALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFY 380 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhH
Confidence 99999999999999999999988766777778999999999988888877766554555555555666666666666666
Q ss_pred hhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhc-c-cCcchHHHHHHHHHHHHHHHhhhhhccCCCCCCCCCC
Q 009409 459 CTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD-S-THSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTR 534 (535)
Q Consensus 459 ~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~-~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (535)
.......|++.+..+|+.+.+..+.++++|.+.|.+.. . ...|..+|++.+++.++. .+.+.++.+.++|+|+++
T Consensus 381 ~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~-~i~f~~f~s~e~~~w~~~ 457 (466)
T KOG2532|consen 381 KNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVG-NIIFLFFGSGEPAPWTKS 457 (466)
T ss_pred hhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHh-chheeEeecCcccCccCC
Confidence 55555589999999999999999999999999999994 1 236999999988766555 466777777788887653
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=4.5e-37 Score=309.01 Aligned_cols=388 Identities=19% Similarity=0.261 Sum_probs=284.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
+|+.++++++.+++.++++.+++...|.+.+++|.+..+.|++.+++.+++.+++++.|+++||+|||+++..+.+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 56788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcc------c
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE------N 265 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------~ 265 (535)
+.++.+ ++++++.+++.|++.|++.+...+....++.|++|+++|+++++++..+..+|.++++++++++.+ .
T Consensus 86 ~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 164 (412)
T TIGR02332 86 ASTATM-FATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMAL 164 (412)
T ss_pred HHHHHH-HhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 998875 678889999999999999999999999999999999999999999999999999999999998864 3
Q ss_pred cchhHHHHHHHHHHHHHHH-HhhhcccCCCCCCCCCCcchhhhhhhhh--hhhhHHHhc---cCCC---CCcHHHhhhcH
Q 009409 266 LGWESVFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKS--LSASLEEMG---ESLK---DVPWKAIFRSK 336 (535)
Q Consensus 266 ~gw~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~---~~~~~~~~~~~ 336 (535)
.|||+.|++.++..++..+ ..++++|+++..+ ...++++....+.. ...+.++.+ +..+ ...++.++ ++
T Consensus 165 ~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 242 (412)
T TIGR02332 165 KGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAK-WLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TP 242 (412)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhccCCCcccCC-CCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-Ch
Confidence 6999999998888765544 4445555443221 11111111000000 000000000 0000 11234433 57
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhHHHHHHH-hCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHH
Q 009409 337 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEE-LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 415 (535)
Q Consensus 337 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 415 (535)
.+|...+..++.....+.+.+|+|.|+++. .|++..+++.+.....++.+++.++.|+++||+++| +.. ..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r-------~~~-~~ 314 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER-------KHH-TA 314 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc-------HHH-HH
Confidence 888888888888888999999999999763 467888999999999999999999999999999754 211 11
Q ss_pred HHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009409 416 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 495 (535)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 495 (535)
...+...+.+.+... ..........+++.+.+.............+..++++|+++.|+.+..+++|++++|.+.|.+.
T Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~ 393 (412)
T TIGR02332 315 LPYLFAAAGWLLASA-TDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILK 393 (412)
T ss_pred HHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccccc
Confidence 222222222222221 2222222222222222211111111122234478899999999999999999999999999999
Q ss_pred cccCcchHHHHHHHHH
Q 009409 496 DSTHSWSMSLFAPSIF 511 (535)
Q Consensus 496 ~~~g~~~~~~~~~~~~ 511 (535)
|..|+|...+.+.+++
T Consensus 394 ~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 394 DATGSFNSGLWFVAAL 409 (412)
T ss_pred ccCCCCchhHHHHHHH
Confidence 9988899888775553
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=3.6e-36 Score=301.35 Aligned_cols=373 Identities=17% Similarity=0.174 Sum_probs=284.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
|..+..+.+..+..........+.+|.+.+++|.|..+.|++.+.+.+++.++++++|++.||+|||+++..+.++++++
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 87 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIAS 87 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 34444445544444444445566789999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHH
Q 009409 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (535)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f 272 (535)
+++.. .+++++.++++|+++|++.+...+...+++.+++|+++|++++|++..+..+|.+++|++++.+.+..|||+.|
T Consensus 88 ~~~~~-~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f 166 (390)
T PRK03545 88 HVLSA-LAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTF 166 (390)
T ss_pred HHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHH
Confidence 87764 67888999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh-hcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhh
Q 009409 273 YIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (535)
Q Consensus 273 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (535)
++.+++.++..+... .+|+++++++ .. ...+++.+|+|.++...+..++....
T Consensus 167 ~~~~~~~~l~~~~~~~~~~~~~~~~~----~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (390)
T PRK03545 167 LAIGGGALITLLLLIKLLPLLPSEHS----GS----------------------LKSLPLLFRRPALVSLYLLTVVVVTA 220 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCc----ch----------------------HHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 999887766544433 3333221100 00 00135678888888776666666666
Q ss_pred hHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhc
Q 009409 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 431 (535)
Q Consensus 352 ~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (535)
.+....++|.++++.+|++..+++.+.....++.++++++.+++.||++++ .... +..............
T Consensus 221 ~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~---------~~~~-~~~~~~~~~~~l~~~ 290 (390)
T PRK03545 221 HFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG---------FLLI-AIALLLVCLLLLLPA 290 (390)
T ss_pred HHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh---------HHHH-HHHHHHHHHHHHHHH
Confidence 677778888898888899999999999999999999999999999998743 2222 222222222222111
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHH
Q 009409 432 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 511 (535)
Q Consensus 432 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~ 511 (535)
.++....++..++.|++.....+.......+ ..|+.++++.|+++...++|..+||.++|.+.|..| +...|...+.+
T Consensus 291 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~~~~ 368 (390)
T PRK03545 291 ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLK-LAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVGAAL 368 (390)
T ss_pred hchHHHHHHHHHHHHHHHhcchHHHHHHHHH-hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHHHHH
Confidence 2333444455556666655544444444444 456789999999999999999999999999999984 88888887776
Q ss_pred HHHHHHhhhhhcc
Q 009409 512 FYLTGTIVWLAFA 524 (535)
Q Consensus 512 ~~~~~~~~~~~~~ 524 (535)
.+++.+..+...+
T Consensus 369 ~~~~~~~~~~~~~ 381 (390)
T PRK03545 369 ALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHcc
Confidence 6666665555554
No 9
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=4.8e-36 Score=301.33 Aligned_cols=394 Identities=25% Similarity=0.398 Sum_probs=295.1
Q ss_pred HHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhh
Q 009409 123 FVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF 202 (535)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 202 (535)
++..++++..++...|.+.+++|.+..+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++..+.+ ..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~-~~~~ 81 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA-FAGA 81 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH-HHcC
Confidence 456778889999999999999999999999999999999999999999999999999999999999888887775 5667
Q ss_pred hhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHH
Q 009409 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (535)
Q Consensus 203 ~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~ 282 (535)
++.+++.|++.|++.+...+....++.|++|+++|++++++......+|.+++|.+++.+.+..+||+.|++.+++.++.
T Consensus 82 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 161 (399)
T TIGR00893 82 YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIW 161 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999988887665
Q ss_pred HHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHH
Q 009409 283 FSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTY 362 (535)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~ 362 (535)
.+......++++++++...++++....++...+..++.+++.....+++.+++|+++...+..++.......+..+.|.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (399)
T TIGR00893 162 GVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTY 241 (399)
T ss_pred HHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 55444433332222111111111100000000000111112223456788899999999999999999999999999999
Q ss_pred HHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHH
Q 009409 363 FSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGI 442 (535)
Q Consensus 363 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (535)
+++.+|.+..+.+.+.+...++.+++.++.+++.||+++|+..... .........+.. .............+..+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 318 (399)
T TIGR00893 242 LVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVF-ARKTAIIAGLVL--SLLMFATNYVNIPYAALAL 318 (399)
T ss_pred HHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhH-HHHHHHHHHHHH--HHHHHHhccchhHHHHHHH
Confidence 9988999999999999999999999999999999999987421100 001111111111 1111111111223333333
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhh
Q 009409 443 LTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW 520 (535)
Q Consensus 443 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 520 (535)
...+.+.....+.......+..|+++|+++.|+.+.+.++|..++|.+.|.+.|..|++...+.+.+++.+++.+..+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 319 VALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 333333333456666677788899999999999999999999999999999999987688888877776655544443
No 10
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=6.2e-36 Score=313.07 Aligned_cols=406 Identities=13% Similarity=0.126 Sum_probs=291.8
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHH
Q 009409 110 PQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (535)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (535)
+..|.++++++++.+...++...++..+|.+.+++|++..+.+++.+++.++.+++.+++|+++||+|||++++++.+++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34566677777788888888888999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc----
Q 009409 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN---- 265 (535)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---- 265 (535)
+++.++.+ ++++++.++++|++.|++.++..+...++++|++|+++|++.++++.+++.+|.++++.++..+...
T Consensus 243 ~i~~ll~a-fa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~ 321 (742)
T TIGR01299 243 GFFAFFSS-FVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWS 321 (742)
T ss_pred HHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 88887764 6677899999999999999999999999999999999999999999999999999999888766543
Q ss_pred ---------cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhh---hh----------------hhhhH
Q 009409 266 ---------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMK---KS----------------LSASL 317 (535)
Q Consensus 266 ---------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----------------~~~~~ 317 (535)
.+||+.|++.++..++.++..+++||+++....+.+.++.....+ +. .....
T Consensus 322 ~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~ 401 (742)
T TIGR01299 322 FQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIH 401 (742)
T ss_pred hccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhh
Confidence 369999999888877777777888887654211111110000000 00 00000
Q ss_pred HHh-----ccCCC-----------------CCcHHHhhhc---HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHH----h-
Q 009409 318 EEM-----GESLK-----------------DVPWKAIFRS---KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE----L- 367 (535)
Q Consensus 318 ~~~-----~~~~~-----------------~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~----~- 367 (535)
... ++... +..++.+++. +..+.+++.+++..+++|++..|+|.++++. +
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~ 481 (742)
T TIGR01299 402 QEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYA 481 (742)
T ss_pred hhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00000 0023344443 3446677888889999999999999987541 0
Q ss_pred ----------------CCCh------------------------------------------------------------
Q 009409 368 ----------------SLNL------------------------------------------------------------ 371 (535)
Q Consensus 368 ----------------g~s~------------------------------------------------------------ 371 (535)
+++.
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 561 (742)
T TIGR01299 482 ALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDF 561 (742)
T ss_pred hhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccch
Confidence 0000
Q ss_pred ---------------------------------hhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHH
Q 009409 372 ---------------------------------TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 418 (535)
Q Consensus 372 ---------------------------------~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 418 (535)
....+...+..++.+++.+++|+++||+|+| ..+..++
T Consensus 562 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr---------~~l~~~~ 632 (742)
T TIGR01299 562 EEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL---------RMLAGSM 632 (742)
T ss_pred hhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHH
Confidence 0123345666788999999999999999864 3344455
Q ss_pred HHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhccc
Q 009409 419 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 498 (535)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~ 498 (535)
++.+++.++..... +....++..++.+++.+........++.+.+|++.|++++|+.++...+|.+++|.++|.+.+..
T Consensus 633 ~lsai~~ll~~~~~-s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~ 711 (742)
T TIGR01299 633 VLSCISCFFLSFGN-SESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT 711 (742)
T ss_pred HHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 55555444443322 22333344445555555555666667777789999999999999999999999999999998753
Q ss_pred CcchHHHHHHHHHHHHHHHhhhhhccCCCCC
Q 009409 499 HSWSMSLFAPSIFFYLTGTIVWLAFASSKPQ 529 (535)
Q Consensus 499 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (535)
...+|++.+++.++++++.++. ++++.+
T Consensus 712 --~~~pf~i~a~~lll~~ll~~~L-PET~~~ 739 (742)
T TIGR01299 712 --KAAPILFASAALACGGLLALKL-PDTRGQ 739 (742)
T ss_pred --hHHHHHHHHHHHHHHHHHHHhC-CCCccc
Confidence 5566766666665555554433 555443
No 11
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=2.1e-35 Score=295.39 Aligned_cols=382 Identities=14% Similarity=0.129 Sum_probs=287.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
|.....+++..+...+. ..+++.+|.+.+++|+|..+.+++.+.+.+++.+++++.|+++||+|||+++..+..+++++
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~ 87 (393)
T PRK09705 9 FMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVG 87 (393)
T ss_pred HHHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHH
Confidence 34444444444333222 66788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc-chhHH
Q 009409 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESV 271 (535)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~ 271 (535)
.++.+ ++++++.+++.|+++|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.++. +||+.
T Consensus 88 ~~~~~-~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~ 165 (393)
T PRK09705 88 ALMRE-LYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQT 165 (393)
T ss_pred HHHHH-HCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 98875 67788999999999999999999999999999997 88999999999999999999999999988875 89999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhh
Q 009409 272 FYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (535)
Q Consensus 272 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (535)
+.+.++..++..+..+...+++++.+.+ ++ . ..++.+++++.|.+.+..++....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----------------------~-~~~~~l~~~~~~~l~~~~~~~~~~ 220 (393)
T PRK09705 166 LAWWALPAVVALFAWWWQSAREVASSHK--TT----------------------T-TPVRVVFTPRAWTLGVYFGLINGG 220 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccC--CC----------------------c-CCcccccCHhHHHHHHHHHHHHHH
Confidence 8876665544433333332222111000 00 0 012445678888877777777788
Q ss_pred hHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhc
Q 009409 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 431 (535)
Q Consensus 352 ~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (535)
++...+|+|.|+++ +|++..++|.+.++..++.++++++.+++.||++++ .....+..+..+........
T Consensus 221 ~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~---------~~~~~~~~l~~~~~~~~~~~ 290 (393)
T PRK09705 221 YASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR---------KLLMLALVLQLVGFCGFIWL 290 (393)
T ss_pred HHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch---------HHHHHHHHHHHHHHHHHHHc
Confidence 88899999999986 799999999999999999999999999999998764 12222222222222222211
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccC-CcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHH
Q 009409 432 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS-PEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI 510 (535)
Q Consensus 432 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~ 510 (535)
..+.... ..++.+++.+...+.......+..+ +++++++.|+.+.++++++.++|.+.|++.|..|++...|.+.++
T Consensus 291 ~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~ 368 (393)
T PRK09705 291 PLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHAL 368 (393)
T ss_pred cchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 2222222 2234455555555544444455554 578999999999999999999999999999999889999988887
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCC
Q 009409 511 FFYLTGTIVWLAFASSKPQNFSTR 534 (535)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~ 534 (535)
+.++..++.+.+.++++.+.+.++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK09705 369 CVVGLMIITLRFAPARFPQLWVKE 392 (393)
T ss_pred HHHHHHHHHHHhccccccchhccc
Confidence 777777776777777666665543
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.4e-34 Score=291.75 Aligned_cols=382 Identities=20% Similarity=0.235 Sum_probs=288.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHH
Q 009409 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (535)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (535)
++|..+...++..+..+++....+...|.+.+++|.|..+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 91 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFG 91 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 35667777778888899999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhH
Q 009409 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (535)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 270 (535)
++.++.. ..++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+||+
T Consensus 92 ~~~~~~~-~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 170 (406)
T PRK11551 92 LFSLATA-QAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRH 170 (406)
T ss_pred HHHHHHH-HhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHH
Confidence 8876664 567789999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHH-HhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhh---hcHHHHHHHHHHH
Q 009409 271 VFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIF---RSKAVWAMIYAHF 346 (535)
Q Consensus 271 ~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~ 346 (535)
.|++.+++.++..+ ...++|++++....+..++++ + ...+..+ +.+..+.+.+..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~----------------~~~~~~~~~~~~~~~~~~~~~~~ 230 (406)
T PRK11551 171 IFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR----A----------------PVLRALFGEGRATATLLLWISYF 230 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh----h----------------hhHHHHhhhhhhhHHHHHHHHHH
Confidence 99998876555443 334455543321111000000 0 0001111 1233344444455
Q ss_pred HHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHH
Q 009409 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT 426 (535)
Q Consensus 347 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (535)
+.....+....++|.|+++ .|++..+.+.+.....++.++++++.|++.||++++ .......+...+.+.
T Consensus 231 ~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~---------~~~~~~~~~~~~~~~ 300 (406)
T PRK11551 231 FTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR---------RVVLLIYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH---------HHHHHHHHHHHHHHH
Confidence 5556667778899999975 699999999999999999999999999999999864 122222222222322
Q ss_pred HhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHH
Q 009409 427 LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLF 506 (535)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~ 506 (535)
.... ..+.....+..++.+++.....+.......+.+|+++|+++.|+.++..++|..++|.++|.+.+..+++...+.
T Consensus 301 ~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~ 379 (406)
T PRK11551 301 ALAA-APSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIG 379 (406)
T ss_pred HHHh-cCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHH
Confidence 2222 223333344445555555555555556677778999999999999999999999999999999998777777776
Q ss_pred HHHHHHHHHHHhhhhhcc
Q 009409 507 APSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~ 524 (535)
....+.+++.++.+...+
T Consensus 380 ~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 380 ASIPVILVAALAALLLVS 397 (406)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 666655555555544443
No 13
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=8.3e-35 Score=296.64 Aligned_cols=401 Identities=15% Similarity=0.208 Sum_probs=277.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
|.++..+++.+...++++..+++..|.+.++ |+|..+.+++.+.+.+++.++++++|+++||+|||++++++.++.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~ 106 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV 106 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHH
Confidence 4555556666777777877788889998888 999999999999999999999999999999999999999999998888
Q ss_pred HHHHHhhh---hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHH-HHhhhHHHhccccch
Q 009409 193 TALLPLLA---GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSV-AGLLLAPPIIENLGW 268 (535)
Q Consensus 193 ~~~~~~~~---~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~gw 268 (535)
.++.++.. ++++.+++.|++.|++.+...+.....+.+++|+++|++++++++.+..+|.. .+|+++..+....||
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw 186 (452)
T PRK11273 107 MLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDW 186 (452)
T ss_pred HHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccH
Confidence 87665432 35678899999999999998888888899999999999999999999999874 455554444334599
Q ss_pred hHHHHHHHHHHHHH-HHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHH
Q 009409 269 ESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC 347 (535)
Q Consensus 269 ~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 347 (535)
|+.|++.+++.++. ++..++++++++....+..++.+ ....+.... .++.+.+.++...+.++|++.+|...+..++
T Consensus 187 ~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (452)
T PRK11273 187 HAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK-NDYPDDYNE-KHEQELTAKQIFMQYVLPNKLLWYIAIANVF 264 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh-hcccccccc-ccCCCccHHHHHHHHHHcChHHHHHHHHHHH
Confidence 99999988876654 34445555544321111100000 000000000 0000000000012346789999998888888
Q ss_pred HhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHH
Q 009409 348 GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL 427 (535)
Q Consensus 348 ~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (535)
.....+....++|.|+++..|++..+++.+..+..++.+++.++.|+++||+++++. ............+....
T Consensus 265 ~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~------~~~~~~~~~l~~~~~~~ 338 (452)
T PRK11273 265 VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNR------GATGVFFMTLVTIATIV 338 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCc------chHHHHHHHHHHHHHHH
Confidence 888888899999999998889999999988888899999999999999999964321 11111111111111111
Q ss_pred hhhc-CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhH-HHHHHHHHhcccCcchHHH
Q 009409 428 SSID-LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIV-GVALTGYLLDSTHSWSMSL 505 (535)
Q Consensus 428 ~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i-gp~i~G~l~~~~g~~~~~~ 505 (535)
.... ..+.....+..+..+...............+..|++.+|+++|+.+...++|+.+ +|.++|++.|..| |...|
T Consensus 339 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f 417 (452)
T PRK11273 339 YWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGF 417 (452)
T ss_pred HHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHH
Confidence 1111 1222223333333443322222222233456788899999999999999998765 7999999999986 88888
Q ss_pred HHHHHHHHHHHHhhhhhc
Q 009409 506 FAPSIFFYLTGTIVWLAF 523 (535)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~ 523 (535)
.+.+++.+++++......
T Consensus 418 ~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 418 MVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 877776666655555443
No 14
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.3e-34 Score=298.06 Aligned_cols=373 Identities=17% Similarity=0.129 Sum_probs=289.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
+|..+..+++.+++..+|.+++++++|.+.+++|.+..+.+|+.+.+.+++.++.+++|+++||+|||++++++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 56788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcc-cccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhH
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 270 (535)
++++++ .+++++.++++|+++|+|.+...+.....+.+.+ |+++|++++|++.....+|..+||++++++.++.||||
T Consensus 84 ~~~~~~-~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~ 162 (495)
T PRK14995 84 ASLAAA-FSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGS 162 (495)
T ss_pred HHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHH
Confidence 998775 6788899999999999999998888888887776 67899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HhhhcccCCCCCCCCCCcchhhhh-----------hh---hhhhhh------------------H
Q 009409 271 VFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYIN-----------MK---KSLSAS------------------L 317 (535)
Q Consensus 271 ~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------~~---~~~~~~------------------~ 317 (535)
.|++...+.++.++ ..+.+|++++++ .++.+...... .. +.+... .
T Consensus 163 ~f~i~~~~~~~~~~l~~~~l~~~~~~~-~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~ 241 (495)
T PRK14995 163 VFLINVPIVLVVMGLTARYVPRQAGRR-DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIR 241 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCC-CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 99998877665543 334444433221 11111110000 00 000000 0
Q ss_pred HHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHH
Q 009409 318 EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFAD 397 (535)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d 397 (535)
.+.+......+ .+++|+|.++...+..++.....++...++|.|++..+|+++.++|+...+..++..++.++.|++.|
T Consensus 242 ~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~ 320 (495)
T PRK14995 242 TQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVS 320 (495)
T ss_pred HHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111111112 36788999888888888888888888899999999999999999999999999999999999999999
Q ss_pred HHHHcCCCchhHHHHHHHHHHHHHHHHHHHh-hhcC-CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHH
Q 009409 398 NLIATGVETTMVRKICQTIAFLSPAVCMTLS-SIDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGI 475 (535)
Q Consensus 398 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 475 (535)
|+++| .....+.+...+..... .... .+........++.|++.+.............+|+++++.+.++
T Consensus 321 r~g~~---------~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~ 391 (495)
T PRK14995 321 RLGLR---------LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAI 391 (495)
T ss_pred HcCch---------HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHH
Confidence 99854 22233333333332222 1222 2233344556677888777777777777778899999999999
Q ss_pred HHHhhhhhhhHHHHHHHHHhc
Q 009409 476 TNTVGAVPGIVGVALTGYLLD 496 (535)
Q Consensus 476 ~~~~~~lg~~igp~i~G~l~~ 496 (535)
.++..++|+.+|+.+.|.+.+
T Consensus 392 ~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 392 ETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998865
No 15
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=4.6e-34 Score=286.24 Aligned_cols=376 Identities=17% Similarity=0.166 Sum_probs=284.4
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHH
Q 009409 110 PQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (535)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (535)
++|++.....++.++.........++.+|.+.+++|+|..+.+++.+.+.+++.++++++|++.||+|||+++..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34667777888888888888899999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcc-ccch
Q 009409 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGW 268 (535)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw 268 (535)
+++.++.. .+++++.+++.|++.|++.+...+...+++.+++|+++|+++++..+....+|..++|.+.+++.. ..||
T Consensus 83 ~i~~~l~~-~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 83 ILAVAGLM-FSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHH-HcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 88887765 567788999999999999998888899999999998999999999999999999999999888764 5799
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHH
Q 009409 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (535)
Q Consensus 269 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (535)
|+.|++.+++.++..+..+....+++++.+ +++. ++. . +. ..++.++...+..++.
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~---------------~~~-~----~~-~~~~~~~~~~~~~~~~ 217 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLFSEFPALGKHA---PKAD---------------KPV-A----KE-KWGIGVLFLAIAALLY 217 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccC---cccc---------------Ccc-c----cc-cCChHHHHHHHHHHHH
Confidence 999999888776654443332211111100 0000 000 0 11 1246667777777777
Q ss_pred hhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHh
Q 009409 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS 428 (535)
Q Consensus 349 ~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (535)
....+.+..|+|.|+++.+|+++.+.+.+.+...++..+++++.++++||+++|+ .. .....+..+.+.+.
T Consensus 218 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~--------~l-~~~~~~~~~~~~~~ 288 (394)
T PRK03699 218 ILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR--------IL-TVLAGLALVLMYLF 288 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh--------HH-HHHHHHHHHHHHHH
Confidence 7788889999999998889999999999999999999999999999999998652 11 22222222222222
Q ss_pred hhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHH
Q 009409 429 SIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAP 508 (535)
Q Consensus 429 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~ 508 (535)
.. .++..+..+..++.|++.+...+.......+ ..++.++...|......++|..++|.+.|++.|..| +...++..
T Consensus 289 ~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~ 365 (394)
T PRK03699 289 VN-TDDPSHLLYAILGLGFFSSAIYTTIITLGSQ-QTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTA 365 (394)
T ss_pred HH-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhh
Confidence 22 2334444455566666655554444444444 345566788899999999999999999999999885 77777766
Q ss_pred HHHHHHHHHhhhhh
Q 009409 509 SIFFYLTGTIVWLA 522 (535)
Q Consensus 509 ~~~~~~~~~~~~~~ 522 (535)
+++.+++.++....
T Consensus 366 ~~~~~~~~~~~~~~ 379 (394)
T PRK03699 366 NGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666554443333
No 16
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=4.8e-34 Score=284.87 Aligned_cols=375 Identities=14% Similarity=0.184 Sum_probs=275.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
+.+..+.+..+..........+.+|.+.+++|.+..+.|++.+.+.+++.++++++|+++||+|||+++.++.++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 34556667777888888899999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHH
Q 009409 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (535)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 273 (535)
++.+ .+++++.+++.|++.|++.+...+....++.+++++++|++++++...+..+|..++|++++++.+..|||+.|+
T Consensus 83 ~l~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~ 161 (382)
T PRK10091 83 AMFT-LSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFL 161 (382)
T ss_pred HHHH-HhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHH
Confidence 7764 678889999999999999998888888999999998999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhh
Q 009409 274 IFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (535)
Q Consensus 274 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (535)
+.+++.++..+. ...+|+.+++.+ .+. + .. .+.++++..|......++...+.
T Consensus 162 ~~~~~~~~~~~~~~~~lp~~~~~~~-----~~~----~----------------~~-~~~~~~~~~~~~~~~~~~~~~~~ 215 (382)
T PRK10091 162 LIAVFNIAVLASIYFWVPDIRDEAK-----GGL----R----------------EQ-FHFLRSPAPWLIFAATMFGNAGV 215 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcccc-----cCH----H----------------HH-HHHhcChHHHHHHHHHHHHHHHH
Confidence 998876655443 334444321100 000 0 00 23456777777666555555555
Q ss_pred HHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcC
Q 009409 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL 432 (535)
Q Consensus 353 ~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (535)
+....+++.++.+.+|+++.+.+++.....++.++++++.+++.||+++++ . ......+.++..++.....
T Consensus 216 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~--------~-~~~~~~~~~i~~~~~~~~~ 286 (382)
T PRK10091 216 FAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLR--------I-AAVTDFIIVLALLMLFFFG 286 (382)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchh--------H-HHHHHHHHHHHHHHHHHHH
Confidence 666677788888778999999999999999999999999999999997641 1 2222222232222222112
Q ss_pred CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhc-cCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHH
Q 009409 433 GLPHWEIVGILTAGLALSSFALSGLYCTHQD-ISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 511 (535)
Q Consensus 433 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~ 511 (535)
+......+..++.+.+.....++......+. .+++..+.+ ..+....+|..+||.++|.+.|..++|...+...+++
T Consensus 287 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~ 364 (382)
T PRK10091 287 GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALL 364 (382)
T ss_pred hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHH
Confidence 2223333333344444333333333223333 334445544 3467789999999999999999877798888887665
Q ss_pred HHHHHHhhhhhccCC
Q 009409 512 FYLTGTIVWLAFASS 526 (535)
Q Consensus 512 ~~~~~~~~~~~~~~~ 526 (535)
.++....+....++|
T Consensus 365 ~~~~~~~~~~~~~~~ 379 (382)
T PRK10091 365 SFAAMSSLLLYGRYK 379 (382)
T ss_pred HHHHHHHHHHHhhhh
Confidence 555544444444333
No 17
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.5e-33 Score=288.37 Aligned_cols=389 Identities=13% Similarity=0.074 Sum_probs=272.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
++.+....+..+...++...+.+..|.+.+++|+|..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~ 114 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPA 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 45555556666677777778889999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcc--------
Q 009409 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------- 264 (535)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------- 264 (535)
.++.+ .+++++.++++|++.|++.+... ....++++++|+++|++++|+......+|..+++.+.+.+..
T Consensus 115 ~~~~~-~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 192 (476)
T PLN00028 115 VFCMS-LVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAP 192 (476)
T ss_pred HHHHH-HhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 87765 56677888899999999987654 456678999999999999999988777887777666654432
Q ss_pred -ccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHH
Q 009409 265 -NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 343 (535)
Q Consensus 265 -~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (535)
..|||+.|++.+++.++..+..++++++.++...+ +.++ +. +.++......+++.++++++|.+.+
T Consensus 193 ~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~--~~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (476)
T PLN00028 193 SFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYR--ELKK----SG-------TMPKDSFSKVLRYGVTNYRTWILAL 259 (476)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchh--hHHh----cC-------ccccccHHHHHHHHHcCchhHHHHH
Confidence 25899999999998877666656665443321100 0000 00 0000000112456778889888877
Q ss_pred HHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHH
Q 009409 344 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV 423 (535)
Q Consensus 344 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (535)
..++.....+.+..++|.|+.+.+|++..+++.+.++..++.++++++.|+++||+++|.... .|+....+...+.++
T Consensus 260 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~--~r~~~~~~~~~l~~i 337 (476)
T PLN00028 260 TYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMR--GRLWALWIVQTLGGV 337 (476)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcc--hhHHHHHHHHHHHHH
Confidence 777666666778889999998888999999999999999999999999999999998763211 123333333333333
Q ss_pred HHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchH
Q 009409 424 CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM 503 (535)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~ 503 (535)
.+.+... ..+.....+.+++.+++.+........ ....+.++++|++.|+.+..+++|+.++|.+.+ .+..++|..
T Consensus 338 ~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~ 413 (476)
T PLN00028 338 FCIWLGR-ANSLGAAIVVMILFSIFVQAACGATFG-IVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF--TGSSYSTET 413 (476)
T ss_pred HHHHhcc-cchHHHHHHHHHHHHHHHHHhhhhhcc-cCcccChhhchhhhhhhhccccHHHHHHHHHHH--hcCCccHhh
Confidence 2222222 222222333333444433322222222 223456788999999998887777777776654 222346888
Q ss_pred HHHHHHHHHHHHHHhhhhh
Q 009409 504 SLFAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~ 522 (535)
+|++.+++.+++.++.++.
T Consensus 414 ~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 414 GISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHHHHHHHHHHHHHHhe
Confidence 9988887777666665554
No 18
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=9.5e-34 Score=280.37 Aligned_cols=377 Identities=14% Similarity=0.129 Sum_probs=275.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhc-ccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
++.+.+..+.++..+.....+++..+.+.+ ++|+|.+|.+++.+++.+++.+++++.|++.||+|.|+++.++.+++++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 467777888888999999999999998766 8999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHhh----hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhc----
Q 009409 192 ATALLPLL----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII---- 263 (535)
Q Consensus 192 ~~~~~~~~----~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---- 263 (535)
.+++.++. .++++.+++.|++.|++ +..++.....+++++|+++||+++|+....+++|..++++++..+.
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l 191 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPV 191 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 88877643 16789999999999998 6688899999999999999999999997777777776666554432
Q ss_pred -c-------------ccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcH
Q 009409 264 -E-------------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPW 329 (535)
Q Consensus 264 -~-------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (535)
+ ..+||..+++.+++.++..+..++..++++..+. .. ..+
T Consensus 192 ~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~---~~-----------------------~~~ 245 (462)
T PRK15034 192 FAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA---SI-----------------------ADQ 245 (462)
T ss_pred HHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc---CH-----------------------HHH
Confidence 2 3347888888777776665555554333322110 00 013
Q ss_pred HHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhH
Q 009409 330 KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMV 409 (535)
Q Consensus 330 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~ 409 (535)
+..+|+|+.|.+.+.+++....+.++..++|.|+++.+ +.........+..+...++++++|+++||+|++
T Consensus 246 ~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~------- 316 (462)
T PRK15034 246 LPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGV------- 316 (462)
T ss_pred HHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch-------
Confidence 57899999999999999999888889999999998755 333333334455678889999999999999875
Q ss_pred HHHHHHHHHHHHHHHH-H-HhhhcCC--CcHHHHHH-HHHHHHHHhhhhhhhhhhhhhccCC------------------
Q 009409 410 RKICQTIAFLSPAVCM-T-LSSIDLG--LPHWEIVG-ILTAGLALSSFALSGLYCTHQDISP------------------ 466 (535)
Q Consensus 410 ~~~~~~~~~~~~~~~~-~-~~~~~~~--~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~------------------ 466 (535)
+ .. ...++...+.. . ......+ .+.+.... ++.+.++.+...-...-.+.+.+++
T Consensus 317 ~-vl-~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~ 394 (462)
T PRK15034 317 R-VT-LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQR 394 (462)
T ss_pred H-HH-HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhh
Confidence 2 11 22222122211 1 1111111 12222222 2222222222222222223332332
Q ss_pred ---cchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhccCCC
Q 009409 467 ---EYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 527 (535)
Q Consensus 467 ---~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (535)
++.|.+.|+....+.+|+++.|.+.|...+..|++...|+...+..+++.++.|..+.|+.
T Consensus 395 ~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 395 EAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRK 458 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 2688999999999999999999999999999999999999999999999888888887654
No 19
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=4.3e-33 Score=286.64 Aligned_cols=387 Identities=17% Similarity=0.149 Sum_probs=265.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccc-hhH-----HHHHHHHHHHhhhccchhhhcccCCchhhHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSV-AGL-----VQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGV 186 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~~~-----~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 186 (535)
++.+....+.+++.++|...++...|.+.++++.+.+. ..+ ..++.++++.++++++|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 35666778889999999999999999999998754432 222 247778999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhH--------HHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhh
Q 009409 187 LIWSLATALLPLLAGFMPG--------LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL 258 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~--------l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 258 (535)
+++++++++++ +++++.. ++++|+++|++.|..++...++++|++|+++|++..++...+..+|..+|+.+
T Consensus 95 ~l~~i~~~~~a-~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~ 173 (490)
T PRK10642 95 VIMSISTFCIG-LIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGV 173 (490)
T ss_pred HHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999998875 5666553 88999999999999999999999999999999999999998888888888876
Q ss_pred HHHhc--------cccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHH
Q 009409 259 APPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWK 330 (535)
Q Consensus 259 ~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (535)
...+. ..+|||+.|++.+++.++.+++...++|+++..... ++ . ++. ..+. ..+.++.+++
T Consensus 174 ~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~--~~---~--~~~---~~~~-~~~~~~~~~~ 242 (490)
T PRK10642 174 VVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHV--DK---L--EQG---DREG-LQDGPKVSFK 242 (490)
T ss_pred HHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHH--Hh---h--hhh---cccc-ccccccCCHH
Confidence 65443 257999999997766555444444555543211000 00 0 000 0000 0011233456
Q ss_pred Hhhhc-HHHHH-HHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchh
Q 009409 331 AIFRS-KAVWA-MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM 408 (535)
Q Consensus 331 ~~~~~-~~~~~-~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 408 (535)
+++++ ++.+. .....++....++.+..|+|.|+++.+|++..+.++......++.+++.++.|+++||+|+|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr------ 316 (490)
T PRK10642 243 EIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR------ 316 (490)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH------
Confidence 66653 23332 22334455677888899999999888899988888887888888999999999999999865
Q ss_pred HHHHHHHHHHHH-HHHHHH-HhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhH
Q 009409 409 VRKICQTIAFLS-PAVCMT-LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIV 486 (535)
Q Consensus 409 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i 486 (535)
.....+.+. ....+. +......+....+++.++.+++.+...........+.+|++.|+++.|+.+.+..+++.+
T Consensus 317 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~ 393 (490)
T PRK10642 317 ---PFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGL 393 (490)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHH
Confidence 122222221 111111 111112222333344444444444333333444556689999999999866667788899
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhh
Q 009409 487 GVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW 520 (535)
Q Consensus 487 gp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 520 (535)
+|.+.|++.+..+++...+++..++.++..+..+
T Consensus 394 ~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 427 (490)
T PRK10642 394 TPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV 427 (490)
T ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999998765555555444444444444433
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=6e-34 Score=280.44 Aligned_cols=359 Identities=15% Similarity=0.041 Sum_probs=259.9
Q ss_pred HHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhH
Q 009409 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPG 205 (535)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (535)
+......+++.+|.+.+|+|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+...... ..+.....++++.
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~-~~~~~~~~~~~~~ 81 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAA-AAGRLLDPFNYEW 81 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHH-HHHHHHHhccHHH
Confidence 456677889999999999999999999999999999999999999999999999887655544433 3333233367899
Q ss_pred HHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHH-
Q 009409 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS- 284 (535)
Q Consensus 206 l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~- 284 (535)
++++|+++|++.+. .+.....+++++|+++|++++++...+..+|.++++++++++.+..|||+.|++.+++.++..+
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 99999999999985 4566667799999999999999999999999999999999999999999999998888765543
Q ss_pred HhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHH
Q 009409 285 GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFS 364 (535)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~ 364 (535)
..+.+||+++.+++. .+. + +. ..++++++++|.+|.+.+..++....++.+.+|+|.|++
T Consensus 161 ~~~~lp~~p~~~~~~---~~~----~-------~~------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~ 220 (368)
T TIGR00903 161 VLAALPALPFQAAEG---FGF----K-------DA------VKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALR 220 (368)
T ss_pred HHHHcCCCCCCCCCC---cch----H-------HH------HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556544322110 000 0 00 012578899999999999999999999999999999997
Q ss_pred HHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHH
Q 009409 365 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILT 444 (535)
Q Consensus 365 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (535)
+ .|++.. .+....+..+.+.++ .++++||..+++. |+.......+..++.+..... ..+....+....+
T Consensus 221 ~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~-----r~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~l 289 (368)
T TIGR00903 221 P-AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGL-----RSIYIRAAALLIAAFFLALAF-ELNRLALFAFIGI 289 (368)
T ss_pred H-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhh-----HHHHHHHHHHHHHHHHHHHHH-ccccHHHHHHHHH
Confidence 5 688865 566666666666655 4788888765422 112121122222222222222 2223333333333
Q ss_pred HHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhh
Q 009409 445 AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW 520 (535)
Q Consensus 445 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 520 (535)
.+++.....+....+..+.+|++.||++.|+.+..+++|+.++|.+.|.+.. +....|.+.++..+++.+.++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 290 AGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHH
Confidence 3443333334444566777899999999999999999999999999998884 356677777776666655553
No 21
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=2.6e-33 Score=284.09 Aligned_cols=377 Identities=14% Similarity=0.145 Sum_probs=260.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccC---CCccchhHHHHH---HHHHHHhhhccchhhhcccCCchhhHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFG---WNSSVAGLVQSS---FFWGYALSQLPGGWLAKIFGGRKVLQTGV 186 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~~~~~s~---~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 186 (535)
++.+...++.+++.++|...++...|.+.++++ .+..+.+...++ .+++..++++++|+++||+|||+++..+.
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~ 100 (432)
T PRK10406 21 IWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISV 100 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 345556667888899999999999999999985 455544444444 44455599999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhh--------hHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhh
Q 009409 187 LIWSLATALLPLLAGFM--------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL 258 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~~~--------~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 258 (535)
+++++++++.+ +++++ ..++++|+++|++.|..++...++++|++|+++|++..++...+...|.++++++
T Consensus 101 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 101 CMMCFGSLVIA-CLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHHHHHHHHh-hcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999998875 44443 3689999999999999999999999999999999999999988888888888877
Q ss_pred HHHhc--------cccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHH
Q 009409 259 APPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWK 330 (535)
Q Consensus 259 ~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (535)
...+. +.+|||+.|++.++..++.+.....++|+++.+ + + +.+ +..+++
T Consensus 180 ~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~------~-~-------------~~~---~~~~~~ 236 (432)
T PRK10406 180 VVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQE------T-R-------------ALK---EAGSLK 236 (432)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHH------H-h-------------hhc---ccccHH
Confidence 65543 257999999988777665544433333322110 0 0 000 112467
Q ss_pred HhhhcHHHHHHHHHHHH-HhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhH
Q 009409 331 AIFRSKAVWAMIYAHFC-GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMV 409 (535)
Q Consensus 331 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~ 409 (535)
+++++++.+...+..++ ....++.+.+|+|.|+++.+|++..+.+.......++..++..+.|+++||+++|
T Consensus 237 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr------- 309 (432)
T PRK10406 237 GLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR------- 309 (432)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-------
Confidence 78888888876665554 3667788899999999888899999998888888888889999999999999865
Q ss_pred HHHHHHHHHHHHHHHH-HHhhhcCCCcHHHHHHHHHHH-HHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhh-hhhH
Q 009409 410 RKICQTIAFLSPAVCM-TLSSIDLGLPHWEIVGILTAG-LALSSFALSGLYCTHQDISPEYASILLGITNTVGAV-PGIV 486 (535)
Q Consensus 410 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l-g~~i 486 (535)
+.......+...... ...........+..+.++..+ +..+...........+.+|++.|+++.|+.+.++++ .+..
T Consensus 310 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~ 388 (432)
T PRK10406 310 -TSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGS 388 (432)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhH
Confidence 122221111111111 111111111222222222222 222222223334456778999999999999988765 3455
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhh
Q 009409 487 GVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 487 gp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 522 (535)
.|.+.+.+ +..|++...++..+++.++..+..++.
T Consensus 389 ~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 389 AEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 78888855 555667766666555555555554443
No 22
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=7.3e-34 Score=286.56 Aligned_cols=387 Identities=14% Similarity=0.140 Sum_probs=277.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHH
Q 009409 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (535)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (535)
++++.+..+.+.++..+++....++..|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++..+.++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~ 88 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFS 88 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 45678888889999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc--h
Q 009409 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG--W 268 (535)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--w 268 (535)
++.++.. ..++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|.++++.+++.+.+..+ |
T Consensus 89 ~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w 167 (405)
T TIGR00891 89 AGTLACG-FAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGW 167 (405)
T ss_pred HHHHHHH-HhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccH
Confidence 8887764 567789999999999999999999999999999999999999999999999999999999999987766 9
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhc-cCCCCCcHHHhh-hcH-HHHHHHHHH
Q 009409 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMG-ESLKDVPWKAIF-RSK-AVWAMIYAH 345 (535)
Q Consensus 269 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~l~~ 345 (535)
|+.|++.++..++..+....+|++++.......++......++.......... .+......++.. +++ .+..+.+..
T Consensus 168 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
T TIGR00891 168 RALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLV 247 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHH
Confidence 99999876666555555555555432211110000000000000000000000 000000011111 111 122233333
Q ss_pred HHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHH
Q 009409 346 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCM 425 (535)
Q Consensus 346 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (535)
.+..........++|.|+.+.+|++..+.+.+.+...++.+++.++.+++.||+++|+ ....+.+...+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~---------~~~~~~~~~~~~~ 318 (405)
T TIGR00891 248 LFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRK---------AYVCSLLAGQLLI 318 (405)
T ss_pred HHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchh---------hhHHHHHHHHHHH
Confidence 4444445566788999998889999999999999999999999999999999998652 1222222221111
Q ss_pred HHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHH
Q 009409 426 TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSL 505 (535)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~ 505 (535)
........+.....+..++.++..............+..|+++++++.|+.+.+.++|+.++|.++|++.|..|+|...+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~ 398 (405)
T TIGR00891 319 IPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTAL 398 (405)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhH
Confidence 11111122222333333444444444444455566777899999999999999999999999999999999987777665
Q ss_pred HH
Q 009409 506 FA 507 (535)
Q Consensus 506 ~~ 507 (535)
..
T Consensus 399 ~~ 400 (405)
T TIGR00891 399 AS 400 (405)
T ss_pred Hh
Confidence 44
No 23
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=5.4e-33 Score=277.74 Aligned_cols=362 Identities=17% Similarity=0.184 Sum_probs=270.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
+.+..+.+..+..........+.+|.+.+++|.+..+.++..+++.++..+++++.|+++||+|||+++..+.++.+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~ 99 (394)
T PRK10213 20 SAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSC 99 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHH
Confidence 44444444444444455556667899999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHH
Q 009409 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (535)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 273 (535)
++.. .+++++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|.+++|++++++.+.+|||+.|+
T Consensus 100 ~~~~-~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~ 178 (394)
T PRK10213 100 LLVS-FANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFN 178 (394)
T ss_pred HHHH-HHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence 7765 578889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh-hcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhh
Q 009409 274 IFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (535)
Q Consensus 274 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (535)
+.+++.+++.+... ..|++++++ .+. ....++.+++|.++...+..++.....
T Consensus 179 ~~~~l~~~~~l~~~~~~p~~~~~~----~~~----------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~ 232 (394)
T PRK10213 179 AAAVMGVLCIFWIIKSLPSLPGEP----SHQ----------------------KQNTFRLLQRPGVMAGMIAIFMSFAGQ 232 (394)
T ss_pred HHHHHHHHHHHHHHHHCCCCCccc----ccc----------------------hhHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 98877665443332 234321100 000 011356788999988777666666666
Q ss_pred HHHHHhh-HHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhc
Q 009409 353 YTCLSWL-PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 431 (535)
Q Consensus 353 ~~~~~~~-p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (535)
+....++ |.|. +.+|+++.+.+.+....+++.+++..+.+++.||.++ +.......+.....+.+...
T Consensus 233 ~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~---------~~l~~~~~~~~~~~~~l~~~- 301 (394)
T PRK10213 233 FAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK---------LALAGAPLVLAVSALVLTLW- 301 (394)
T ss_pred HHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch---------hHHHHHHHHHHHHHHHHHHH-
Confidence 6766776 5555 5679999999999999999999999999999998432 12222222222222222222
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHH
Q 009409 432 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 511 (535)
Q Consensus 432 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~ 511 (535)
..+.+......++.|++.+...+.....+.+..+ ++.+++.+......++|..+||.++|.+.|..| +...+...+++
T Consensus 302 ~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g-~~~~~~~~~~~ 379 (394)
T PRK10213 302 GSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG-LTSPLMLSGTL 379 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhhHHHHHHHH
Confidence 2233444455666777776666666666666664 667788888888889999999999999999875 65566555443
Q ss_pred HHHH
Q 009409 512 FYLT 515 (535)
Q Consensus 512 ~~~~ 515 (535)
.++.
T Consensus 380 ~~~~ 383 (394)
T PRK10213 380 MLLT 383 (394)
T ss_pred HHHH
Confidence 3333
No 24
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.5e-33 Score=286.44 Aligned_cols=406 Identities=15% Similarity=0.208 Sum_probs=282.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
+++.+..+.+.+...+.++..+....|.+.+ +|++..+.+++.+++.++..++++++|+++||+|||+++..+.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 3556666667777788888888888888776 599999999999999999999999999999999999999999888888
Q ss_pred HHHHHHhh---hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhc-cccc
Q 009409 192 ATALLPLL---AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII-ENLG 267 (535)
Q Consensus 192 ~~~~~~~~---~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~g 267 (535)
+.++.... .+++..+++.|++.|++.+...+.....+.|++|+++|++++++++.+..+|..+++.+.+... ...+
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 87765432 2456678889999999999999989999999999999999999999999999999988877644 3579
Q ss_pred hhHHHHHHHHHHHHHH-HHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHH
Q 009409 268 WESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (535)
Q Consensus 268 w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (535)
||+.|++.+++.++.. +..++++++++....+..++.+. +..+..... .+.+.+.++...+.+++++.+|...+..+
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN-DYPDDYNEK-AEQELTAKEIFMQYVLPNKLLWYIAIANV 261 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc-ccccccccc-cccccchHHHHHHHHccCchHHHHHHHHH
Confidence 9999999888876654 44444555433211111000000 000000000 00000000111234678999999888888
Q ss_pred HHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHH
Q 009409 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT 426 (535)
Q Consensus 347 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (535)
+.....+++.+++|.|+++.+|+++.+++++..+..+++++++++.|++.||+++++. ............+...
T Consensus 262 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~------~~~~~~~~~~~~~~~~ 335 (438)
T TIGR00712 262 FVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNR------GATGVFFMTLVTIAVI 335 (438)
T ss_pred HHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc------cHHHHHHHHHHHHHHH
Confidence 8888888899999999998889999999999999999999999999999999965421 1111111111111111
Q ss_pred Hhhhc-CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhh-hHHHHHHHHHhcccCcchHH
Q 009409 427 LSSID-LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG-IVGVALTGYLLDSTHSWSMS 504 (535)
Q Consensus 427 ~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~-~igp~i~G~l~~~~g~~~~~ 504 (535)
..... ..+........+..+.+.............+..+++.+|++.|+.+...++|+ +++|.+.|.+.|..| |...
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~ 414 (438)
T TIGR00712 336 VYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGG 414 (438)
T ss_pred HHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHH
Confidence 11111 12222222233333333222111112234566788999999999999988875 689999999999885 8888
Q ss_pred HHHHHHHHHHHHHhhhhhccCCC
Q 009409 505 LFAPSIFFYLTGTIVWLAFASSK 527 (535)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~ 527 (535)
+.+.+++.+++.+..+...++.|
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 415 FMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Confidence 88777766666666555555443
No 25
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1.1e-33 Score=287.79 Aligned_cols=397 Identities=15% Similarity=0.167 Sum_probs=286.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
+|.++..+.+..+..+.....++.+.|.+.+++|.+.++.+++.+.+.++..++.+++|+++||+|||++++.+.+++++
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 96 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASL 96 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHH
Confidence 45666666666666666667788889999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHhhhhhhhHHHH-HHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhH
Q 009409 192 ATALLPLLAGFMPGLVL-SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 270 (535)
+.++.+ .+++++.+++ .|++.|++.+...+....++.++++ ++|++++++...+..+|..++|++++.+.+..|||+
T Consensus 97 ~~~~~~-~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~ 174 (455)
T TIGR00892 97 GMILAS-FSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRG 174 (455)
T ss_pred HHHHHH-HhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHH
Confidence 887764 5666676654 5789999998877777888889996 799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCCCCCCc-chhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHh
Q 009409 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAP-RSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (535)
Q Consensus 271 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (535)
.|++.+++.++..+..+++.+.++.......+ ++.................++..+....+++++|.++...+..++..
T Consensus 175 ~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (455)
T TIGR00892 175 SFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMF 254 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHH
Confidence 99999988765554444443322111000000 00000000000000000000001111125778999998888888888
Q ss_pred hhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhh
Q 009409 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 429 (535)
Q Consensus 350 ~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (535)
.+.+....++|.|+++ +|++..+++++.++.+++.++++++.+++.||...++. ++.....+.+..++.+++..
T Consensus 255 ~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~~~~~~~l~~ll~~ 328 (455)
T TIGR00892 255 LGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH-----VQYLFSFALLFNGLTHLLCA 328 (455)
T ss_pred HHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 8888888899999975 69999999999999999999999999999997421100 22222222222222222222
Q ss_pred hcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHH
Q 009409 430 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPS 509 (535)
Q Consensus 430 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~ 509 (535)
. ..+....++..++.|++.+...+.......+.+++++++++.|++++..++|.++||.++|.+.+..|+|...|++.+
T Consensus 329 ~-~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~ 407 (455)
T TIGR00892 329 L-AGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASG 407 (455)
T ss_pred H-hchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhh
Confidence 2 233344455566677776666666666777778999999999999999999999999999999998877888888877
Q ss_pred HHHHHHHH
Q 009409 510 IFFYLTGT 517 (535)
Q Consensus 510 ~~~~~~~~ 517 (535)
++.+++.+
T Consensus 408 ~~~li~~~ 415 (455)
T TIGR00892 408 SIVVSAGL 415 (455)
T ss_pred HHHHHHHH
Confidence 76555444
No 26
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-33 Score=263.81 Aligned_cols=382 Identities=20% Similarity=0.250 Sum_probs=303.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
+++.+.+..++....++.+..+++..+.+.+++|+|..|.+++.++..+...+..++.|.+.||+|.|++..++.++..+
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~I 91 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLI 91 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHH
Confidence 45777777788888889999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHhhhhh--hhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc--
Q 009409 192 ATALLPLLAGF--MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-- 267 (535)
Q Consensus 192 ~~~~~~~~~~~--~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-- 267 (535)
..+..++..++ ++.+++++++.|++.+ .+.+....++.+|||+++|.++|++. .+++|..+..+++..+....|
T Consensus 92 P~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~ 169 (417)
T COG2223 92 PCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFL 169 (417)
T ss_pred HHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhH
Confidence 88777644333 3499999999999965 45678899999999999999999999 999999999999999998888
Q ss_pred -hhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHH
Q 009409 268 -WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (535)
Q Consensus 268 -w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (535)
|+....+..+..++..+..++..++.++.+...++.. ..+++.++++++.|.+.+.++
T Consensus 170 ~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------------~~~~~~v~~~~~~W~lsllY~ 228 (417)
T COG2223 170 AWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL---------------------PAQLKAVFSNKDTWLLSLLYF 228 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------------hhHHHHHhcCcchHHHHHHHH
Confidence 9999998888777765555555444433211111100 023578889999999999999
Q ss_pred HHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHH
Q 009409 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT 426 (535)
Q Consensus 347 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (535)
....++.++..++|.|++++||.++.++|.+.....+.+.+.++++|+++||+|.+|+ . ...+..++++..
T Consensus 229 ~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv-------~--~~~f~~~~~~~~ 299 (417)
T COG2223 229 ATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV-------T--LAVFVGMALAAA 299 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhH-------H--HHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999997622 2 222222333332
Q ss_pred HhhhcC------CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCc
Q 009409 427 LSSIDL------GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS 500 (535)
Q Consensus 427 ~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~ 500 (535)
+..... .+.......++.+++..+. ......-....+.+++.|.+.|+...++++|+..-|...|...+..|+
T Consensus 300 ~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~-GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~ 378 (417)
T COG2223 300 LLSLFLTGFGHGGSFVVFVAVFLALFVFAGL-GNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS 378 (417)
T ss_pred HHHccccccccCcchHHHHHHHHHHHHHhcc-CcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhccc
Confidence 222222 2222333333444444333 333333333345667899999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhhhccCC
Q 009409 501 WSMSLFAPSIFFYLTGTIVWLAFASS 526 (535)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (535)
+...|.+...+.+++.+..+..+.|+
T Consensus 379 ~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 379 YTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998888888888777765
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=1.2e-32 Score=277.57 Aligned_cols=363 Identities=15% Similarity=0.115 Sum_probs=276.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
++...+.+.+..+...++...+.+.+|.+.+++|.|..+.++..+.+.+++.++.++.|+++||+|||+++..+.++.++
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 11 ALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 44555666667777778888899999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHH
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (535)
+.++.. .+++++.+++.|++.|++.+...+...+.+.|.+|+++|++.+++......+|..++|.+++.+.++.+||+.
T Consensus 91 ~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~ 169 (406)
T PRK15402 91 TCLAIL-LAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGM 169 (406)
T ss_pred HHHHHH-HHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHH
Confidence 887764 5677889999999999999988888999999999999999999999998899999999999999998999999
Q ss_pred HHHHHHHHHHHHHHh-hhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhh
Q 009409 272 FYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (535)
Q Consensus 272 f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (535)
|++.+++.++..+.. ...|+++++.+++ ... ++ ....++.++++|.++...+..++...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (406)
T PRK15402 170 FVLFAALAALSFFGLWRAMPETAGRVGEK----LSL---KE-------------LGRDYKLVLKNRRFVAGALALGLVSL 229 (406)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcccccc----ccH---HH-------------HHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 999888776655433 3344432211110 000 00 01124678899999888777777776
Q ss_pred hhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhh
Q 009409 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI 430 (535)
Q Consensus 351 ~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (535)
..+....+.|.++.+.+|+++.+.+.......++.+++.++.+++.||++++ + ....+.+...+...+...
T Consensus 230 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~--------~-~~~~~~~~~~~g~~~~~~ 300 (406)
T PRK15402 230 PLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLR--------S-LIRMGLWPMVAGLLLAAL 300 (406)
T ss_pred HHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--------H-HHHHHHHHHHHHHHHHHH
Confidence 6667777889999888999999999888878888899999999999999764 1 222222222222222111
Q ss_pred ----cCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHH
Q 009409 431 ----DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSL 505 (535)
Q Consensus 431 ----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~ 505 (535)
......+.++..++.+++.+...+...... ...+++++|++.+.++....+|..+|+.+.|.+++..+.+...+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~ 378 (406)
T PRK15402 301 ATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLT-LFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNL 378 (406)
T ss_pred HHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHH-hhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHH
Confidence 122334445556666666665444433333 33456899999999999999999999999999999876554333
No 28
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.6e-33 Score=284.44 Aligned_cols=368 Identities=17% Similarity=0.179 Sum_probs=265.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
+++.+..+.+.++...++.....+..|.+.+++|+|..+.+++.+++.+++.++++++|+++||+|||+++.++.++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~ 95 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSV 95 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 45666777788888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHH
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (535)
+.++.+ .+++++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+..|||+.
T Consensus 96 ~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~ 174 (426)
T PRK12307 96 GTGLSG-LASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAA 174 (426)
T ss_pred HHHHHH-HHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHH
Confidence 887765 6677899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHH---HHH
Q 009409 272 FYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH---FCG 348 (535)
Q Consensus 272 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~ 348 (535)
|++..+..++.+......|++++...++..++ .+..+...+.....++++++++.++...+.. ++.
T Consensus 175 f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (426)
T PRK12307 175 FFVGLLPVLLVIYIRARAPESKEWEEAKLSGK-----------GKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSI 243 (426)
T ss_pred HHHHHHHHHHHHHHHHHCCCChHHHHhhhhcc-----------ccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHH
Confidence 99855433332222222222211000000000 0000000000112456778888776543322 222
Q ss_pred hhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHh
Q 009409 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS 428 (535)
Q Consensus 349 ~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (535)
....+.+..++|.|+++ .|+++.+.+.+.+...++.++++++.+++.||+++| .....+.+...+.....
T Consensus 244 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~---------~~~~~~~~~~~~~~~~~ 313 (426)
T PRK12307 244 FGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK---------KTFSIGLLMSFLFIFPL 313 (426)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHHHHHHHHHHHHH
Confidence 33334567889999975 599999999999999999999999999999999754 22223332222222222
Q ss_pred hhcCCCcHHHHHHHHHHHHHH--hhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchH
Q 009409 429 SIDLGLPHWEIVGILTAGLAL--SSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM 503 (535)
Q Consensus 429 ~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~ 503 (535)
......... ....+..+... ............+.+|++++|++.|+.+.+..+|+.++|.+.|++.+..| +..
T Consensus 314 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g-~~~ 388 (426)
T PRK12307 314 FRIPQDNYL-LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG-LGA 388 (426)
T ss_pred HHHccccHH-HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc-HHH
Confidence 211222222 22222233222 11222233445677889999999999999999999999999999999885 443
No 29
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2.4e-33 Score=279.84 Aligned_cols=358 Identities=17% Similarity=0.181 Sum_probs=270.5
Q ss_pred HHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhh
Q 009409 125 ICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMP 204 (535)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (535)
+.......+++..|.+.+++|+|..+.+++.+++.+++.++++++|+++||+|||+++..+.++.+++.++.+ .+++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~-~~~~~~ 92 (377)
T TIGR00890 14 FTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYA-IADSLA 92 (377)
T ss_pred HHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHH-HHHHHH
Confidence 3444567788999999999999999999999999999999999999999999999999999999999887764 677889
Q ss_pred HHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHH
Q 009409 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (535)
Q Consensus 205 ~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~ 284 (535)
.++++|++.|++.+...+.....+.+++| ++|++++++...+..+|..+++++.+.+.+..|||+.|++.+++.++..+
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 93 ALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888887 68999999999999999998887877777788999999999988776655
Q ss_pred Hhhh-cccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHH
Q 009409 285 GFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF 363 (535)
Q Consensus 285 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l 363 (535)
.... +++++++..++..+. ..++...++.++++.++...+..++..........+.+.|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (377)
T TIGR00890 172 LGAFLIGYPPGQLIKTNIEV-------------------SVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYG 232 (377)
T ss_pred HHHHheecCchhccccCccc-------------------chhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4443 333322111100000 00011235677888888877777776666666667777777
Q ss_pred HHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcH-HHHHHH
Q 009409 364 SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH-WEIVGI 442 (535)
Q Consensus 364 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 442 (535)
+ .+|.+..+.+.+.+...++.++++++.+++.||+++|+ ....+.....+...+......... ..+...
T Consensus 233 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (377)
T TIGR00890 233 Q-SLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQK---------TMSIVFGISAVGMAAMLFIPMLNDVLFLATV 302 (377)
T ss_pred H-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---------hhhHHHHHHHHHHHHHHHcccchhHHHHHHH
Confidence 5 57899989999999999999999999999999998652 222333333333333222222122 222333
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHH
Q 009409 443 LTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL 514 (535)
Q Consensus 443 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~ 514 (535)
++.+++.+...........+.+++++++++.|+.+...++|..++|.+.|.+.+..| |...|.+.+++.++
T Consensus 303 ~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 303 ALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALT 373 (377)
T ss_pred HHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHH
Confidence 445555554444444556677899999999999999999999999999999999885 88888776665444
No 30
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=7.5e-34 Score=283.66 Aligned_cols=374 Identities=18% Similarity=0.212 Sum_probs=276.3
Q ss_pred HHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhh
Q 009409 121 LAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA 200 (535)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 200 (535)
+.++..+.++..+++..|.+.+++|.+..+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.++.. .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~ 80 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFG-FS 80 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHH-Hh
Confidence 35667888999999999999999999999999999999999999999999999999999999999999888887775 56
Q ss_pred hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHh-hhHHHhccccchhHHHHHHHHHH
Q 009409 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL-LLAPPIIENLGWESVFYIFGLLG 279 (535)
Q Consensus 201 ~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~gw~~~f~~~~~~~ 279 (535)
++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..++| .+++.+.+..+||+.|++.+++.
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 81 TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999999999 57777777889999999988877
Q ss_pred HHHHHHh-hhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHh
Q 009409 280 IAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 358 (535)
Q Consensus 280 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 358 (535)
++..+.. +..+++++.......+++.....++ ..+.++.+.+..+..++.++++|.++.+.+..++.......+..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDG--DAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDW 238 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCccccccc--ccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 6554433 3444433221111111100000000 000000001111223567788999999888888888888889999
Q ss_pred hHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhc-CCCcHH
Q 009409 359 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID-LGLPHW 437 (535)
Q Consensus 359 ~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 437 (535)
.|.|+++.+|++..+.+.+.....++.++++++.+++.||..+++. ..............+...... ..+..+
T Consensus 239 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (379)
T TIGR00881 239 SPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRR------GPLAVFFMALIIVSLLVYWLNPAANPLM 312 (379)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcc------hHHHHHHHHHHHHHHHHHhcCcchhHHH
Confidence 9999998899999999999999999999999999999999754421 111111111111111111111 112223
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHH
Q 009409 438 EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMS 504 (535)
Q Consensus 438 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~ 504 (535)
..+..++.|...............+..|+++|+++.|+.+....+|+.++|.+.|.+.|..| |...
T Consensus 313 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~ 378 (379)
T TIGR00881 313 DLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG-WAGA 378 (379)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc-cccc
Confidence 33334444444333333344456677899999999999999999999999999999999874 6543
No 31
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1.7e-32 Score=275.85 Aligned_cols=373 Identities=17% Similarity=0.157 Sum_probs=271.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
+.+..+.+..++..++.....+.+|. +.+++|.|..+.|++.+++.+++.++++++|+++||+|||++++.+.++++++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 55666778888888999999999997 67889999999999999999999999999999999999999999999887776
Q ss_pred HHHHHhh--h-----hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc
Q 009409 193 TALLPLL--A-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (535)
Q Consensus 193 ~~~~~~~--~-----~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (535)
.++.... . .++..+++.|+++|++.+...+....++.+++++++|++++++...+..+|.++|+.+++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 5544322 1 14567899999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHH
Q 009409 266 LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH 345 (535)
Q Consensus 266 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (535)
.||++.+++.+++.++..+.....++.++ .+ .++ .++++.++ +++......
T Consensus 175 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~-----------------------~~~~~~~~--~~~~~~~~~ 225 (399)
T PRK05122 175 GGLAGLGLLIMLLALLGLLLARPRPAVPP---VK-GER-----------------------LPFRRVLG--RVWPYGMGL 225 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCCCCC---CC-ccc-----------------------hhHHHHHH--HHHHHHHHH
Confidence 99999988876665443333222221110 00 000 01122222 122222233
Q ss_pred HHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHH
Q 009409 346 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCM 425 (535)
Q Consensus 346 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (535)
.+....+.....++|.|+.+ .|.+ ..+.......++.++++++.+++.||++++ + ....+.....+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~--------~-~~~~~~~~~~~~~ 293 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRLGGL--------R-VAIVSLLVEILGL 293 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccH--------H-HHHHHHHHHHHHH
Confidence 34445556677888888865 4653 456666778888899999999999998754 2 2222333333333
Q ss_pred HHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHH
Q 009409 426 TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSL 505 (535)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~ 505 (535)
.+... .++....++..++.|++.+...+.......+..+++++|++.|+++....+|..++|.+.|.+.+..| +...+
T Consensus 294 ~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~ 371 (399)
T PRK05122 294 LLLWL-APSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIF 371 (399)
T ss_pred HHHHH-hccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHH
Confidence 33222 23334444555667777666555555556677889999999999999999999999999999999875 88888
Q ss_pred HHHHHHHHHHHHhhhhhccCCCCC
Q 009409 506 FAPSIFFYLTGTIVWLAFASSKPQ 529 (535)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~ 529 (535)
.+.+++.+++.++.+...++++++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~ 395 (399)
T PRK05122 372 LAAALAALLGLALTWLLYRRAPRA 395 (399)
T ss_pred HHHHHHHHHHHHHHHHhccccccc
Confidence 887776666665555554444443
No 32
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=1.6e-33 Score=284.83 Aligned_cols=380 Identities=13% Similarity=0.044 Sum_probs=279.3
Q ss_pred HHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHh-
Q 009409 120 SLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL- 198 (535)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~- 198 (535)
.+..++..++.....+.+|.+.++++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+....
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~ 102 (417)
T PRK10489 23 FIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALN 102 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHH
Confidence 3345566677778888899999999999999999999999999999999999999999999999988777766554432
Q ss_pred ---hhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHH
Q 009409 199 ---LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF 275 (535)
Q Consensus 199 ---~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~ 275 (535)
..++++.+++.|++.|++.+...+...+++.+++|+++|+++.++......+|..+||.+++.+.+..+|++.|++.
T Consensus 103 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~ 182 (417)
T PRK10489 103 AFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLA 182 (417)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHH
Confidence 14567888899999999988888888999999999999999999999999999999999999999888999999998
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHH
Q 009409 276 GLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (535)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (535)
++..++..+..+.+|++++++.+. ++.. ++ ....++..+++|.++...+..++... ....
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~~~~----~~~~----------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 242 (417)
T PRK10489 183 AAGTFITLLPLLRLPALPPPPQPR----EHPL----------RS-----LLAGFRFLLASPVVGGIALLGGLLTM-ASAV 242 (417)
T ss_pred HHHHHHHHHHHHhCCCCCCCCccc----ccch----------HH-----HHHHHHHHHcChHHHHHHHHHHHHHH-HHhH
Confidence 877766666666666543221110 0000 00 00124566778887666555544333 3567
Q ss_pred HHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCc
Q 009409 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP 435 (535)
Q Consensus 356 ~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (535)
..++|.|+++.+|+++...|++.+...++.+++.++.+++.||.+++ .....+.+..++.+.+... .++.
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~---------~~l~~~~~~~~~~~~~~~~-~~~~ 312 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG---------LLMLLSTLGSFLAVGLFGL-MPMW 312 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc---------hHHHHHHHHHHHHHHHHHc-cchH
Confidence 78899999887899999999999999999999999999999874322 1222223333333333322 2223
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Q 009409 436 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 515 (535)
Q Consensus 436 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~ 515 (535)
....+..++.|++.+...+.......+..|++.||+++|+++...++|..+||.+.|.+.+..| +...+...+++.++.
T Consensus 313 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~ 391 (417)
T PRK10489 313 ILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLII 391 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHH
Confidence 3334455556665554444444556666888899999999999999999999999999999885 566666666666665
Q ss_pred HHhhhhhccCCCCCC
Q 009409 516 GTIVWLAFASSKPQN 530 (535)
Q Consensus 516 ~~~~~~~~~~~~~~~ 530 (535)
+++++...++.|+++
T Consensus 392 ~~~~~~~~~~~~~~~ 406 (417)
T PRK10489 392 GVLLLLVLGELRRFR 406 (417)
T ss_pred HHHHHHhcccccccc
Confidence 566555555444433
No 33
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.2e-32 Score=273.56 Aligned_cols=357 Identities=14% Similarity=0.082 Sum_probs=278.8
Q ss_pred HHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHh
Q 009409 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (535)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (535)
+.+..++..++.....+.+|.+..+++.+..+.+++.+++.++..++++++|+++||+|||++++.+.++.+++..+...
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 44667777888888899999999999999999999999999999999999999999999999999998888777766653
Q ss_pred hh----hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHH
Q 009409 199 LA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (535)
Q Consensus 199 ~~----~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~ 274 (535)
.. .+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++||.+++.+.+..|||+.|++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 163 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWV 163 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 33 17789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHH
Q 009409 275 FGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 354 (535)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (535)
.++..++..+....++.+++++.+..+.+++. . ++ ....++..+++|.++...+..++.......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (365)
T TIGR00900 164 DAVGFAISALLIVSVRIPELAASEIQALSNAV---L-------RD-----TREGIKFVLKNPLLRTLLLLALLFNLVFAP 228 (365)
T ss_pred HHHHHHHHHHHHHhcccccCCCccccccchhH---H-------HH-----HHhHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 88766655444444433222111111000000 0 00 011346778899998888877777777776
Q ss_pred HH-HhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCC
Q 009409 355 CL-SWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG 433 (535)
Q Consensus 355 ~~-~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (535)
.. .+.|.|.++.+|.+..+.+.+.....++.+++.++.+++.||++++ .....+....++.........+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 299 (365)
T TIGR00900 229 AIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM---------ALMTGAIFVIGLAILVVGLTPP 299 (365)
T ss_pred HHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh---------HHHHHHHHHHHHHHHHHHhhch
Confidence 66 8899999877899999999999999999999999999999998754 2222333333333333332222
Q ss_pred CcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccC
Q 009409 434 LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH 499 (535)
Q Consensus 434 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 499 (535)
+.....+..++.|++.+...+.......+.+|+++|+++.|+.++..+++..++|.++|.+.|..|
T Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 300 NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 233444556667777776666677777888999999999999999999999999999999998753
No 34
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=4.3e-32 Score=278.96 Aligned_cols=374 Identities=20% Similarity=0.218 Sum_probs=279.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
+.+..+++..++..++.+.+++.+|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 89 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 34556677888888999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHH
Q 009409 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (535)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 273 (535)
++.. .+++++.+++.|+++|++.+...+...+++.+++|+++|++++++.....++|..+||.+++.+.++.|||+.|+
T Consensus 90 ~~~~-~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 90 LFCA-LSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHH-HhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 7664 567788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhh-------------hhhh--hhhh-----------------hHHHhc
Q 009409 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI-------------NMKK--SLSA-----------------SLEEMG 321 (535)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~--~~~~-----------------~~~~~~ 321 (535)
+......+..+......++.+.... +.+..... ...+ .+.. ..++..
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTR-RFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARN 247 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCC-CCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9877665554444333222211111 11100000 0000 0000 000111
Q ss_pred cCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 009409 322 ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 401 (535)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~ 401 (535)
...+..+. +++|||.++...+..++...+......+.|.|++..+|.++.+++++.....++.+++.++.+++.||+++
T Consensus 248 ~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~ 326 (471)
T PRK10504 248 NNRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGY 326 (471)
T ss_pred CCCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 11112233 57899999988888888888877778889999987789999999999988888888888999999999986
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHhhh-cCCCcHH-HHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHh
Q 009409 402 TGVETTMVRKICQTIAFLSPAVCMTLSSI-DLGLPHW-EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTV 479 (535)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 479 (535)
| .....+.+..++...+... ......+ ..+..++.|++.+...........+.++++.++.++|+.++.
T Consensus 327 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 397 (471)
T PRK10504 327 R---------RVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMI 397 (471)
T ss_pred h---------HHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHH
Confidence 4 2222333323322222222 1122222 233444555655555555566666778999999999999999
Q ss_pred hhhhhhHHHHHHHHHhcccC
Q 009409 480 GAVPGIVGVALTGYLLDSTH 499 (535)
Q Consensus 480 ~~lg~~igp~i~G~l~~~~g 499 (535)
..+|..+|+.++|.+.+..|
T Consensus 398 ~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 398 MQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999988764
No 35
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=4.8e-32 Score=272.30 Aligned_cols=379 Identities=12% Similarity=0.087 Sum_probs=270.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
+.+....++.++..+......+.++.+.+++|.|..+.|++.+.+.+++.++.+++|++.||+|||+++..+.++++++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~ 92 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGH 92 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 34445555555666666666667777778999999999999999999999999999999999999999999999888876
Q ss_pred HHHHh---hhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHH-HHHhhhHHHhccccchh
Q 009409 194 ALLPL---LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS-VAGLLLAPPIIENLGWE 269 (535)
Q Consensus 194 ~~~~~---~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~gw~ 269 (535)
++... ..++++.+++.|++.|++.+...+...+.+.+++|+++|++++|+..++.++|. +++|++++++.+..||+
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~ 172 (402)
T TIGR00897 93 AAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEM 172 (402)
T ss_pred HHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchH
Confidence 54421 235677888999999999888777788888899999999999999999999996 68999999999888977
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHh
Q 009409 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (535)
Q Consensus 270 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (535)
..+|......++..+...++.+++++++.+ +++++. + + ....++.++++|.++...+..++..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~--------~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (402)
T TIGR00897 173 NTLWSALAFVLTGGVIALFSNKDIFTPQHM-QTREKF---S--------E-----LGKAATILFTNPNVLLGGMVRIINT 235 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCcccc-cCCcch---h--------h-----HHHHHHHHHcChhHHHHHHHHHHHH
Confidence 666654443333222222222221111100 000000 0 0 0012457889999998888888888
Q ss_pred hhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHH---HHHH
Q 009409 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA---VCMT 426 (535)
Q Consensus 350 ~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 426 (535)
...+++.++.|.|+++ +|++..+.+.+.....++.+++.++.|+++||+++|+ .......+... ..+.
T Consensus 236 ~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~--------~~~~~~~l~~~~~~~~l~ 306 (402)
T TIGR00897 236 IGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN--------TVRWFGGVGCGIFTLALY 306 (402)
T ss_pred HHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh--------HHHHHHHHHHHHHHHHHH
Confidence 8888999999999965 7999999999889999999999999999999998652 11111111111 1111
Q ss_pred Hhhh-cCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHH
Q 009409 427 LSSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSL 505 (535)
Q Consensus 427 ~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~ 505 (535)
.... ..++....++..++.|++.+...+ .... ..+.+|++||++.|+.+....+|+.++|.++|.+.|..| +...+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~-~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~ 383 (402)
T TIGR00897 307 YIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAV-FPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVV 383 (402)
T ss_pred HHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHH-HHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHH
Confidence 1111 112233344455556665554432 2333 344678899999999999999999999999999999985 77777
Q ss_pred HHHHHHHHHHHHhhhh
Q 009409 506 FAPSIFFYLTGTIVWL 521 (535)
Q Consensus 506 ~~~~~~~~~~~~~~~~ 521 (535)
.+.+++.+++.++..+
T Consensus 384 ~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 384 WIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777766666555444
No 36
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=9.7e-33 Score=285.18 Aligned_cols=372 Identities=21% Similarity=0.222 Sum_probs=288.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
+.+..+++..++..++....++.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++++.++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 45667778888999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHH
Q 009409 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (535)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 273 (535)
++.+ .+++++.+++.|+++|++.+...+...+++.|++|+++|+++++++.....+|..+||.+++++.++.|||+.|+
T Consensus 82 ~~~~-~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 82 LLCG-VAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHHh-CcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 7774 678889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh-hhcccCCCCCCCCCCcchhh---------------hhhhhhhhhh------------------HHH
Q 009409 274 IFGLLGIAWFSGF-KILQEGETSNGATLAPRSNY---------------INMKKSLSAS------------------LEE 319 (535)
Q Consensus 274 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~------------------~~~ 319 (535)
+.+++.++..+.. +.++++++...+ ..+.... ...+..+.++ ..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASE-NFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWE 239 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccC-CCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9887766554433 334443222111 1111000 0000000000 001
Q ss_pred hccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 009409 320 MGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (535)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 399 (535)
..++.+..+ .+.+++|.++...+..++.....+....++|.|+++.+|+++.+++++..+..++.+++.++.|++.||+
T Consensus 240 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~ 318 (485)
T TIGR00711 240 LTDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI 318 (485)
T ss_pred HcCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 111111111 3678889998888888888888899999999999988999999999999999999999999999999999
Q ss_pred HHcCCCchhHHHHHHHHHHHHHHHHHHHhh--hcCCCcH-HHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHH
Q 009409 400 IATGVETTMVRKICQTIAFLSPAVCMTLSS--IDLGLPH-WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGIT 476 (535)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 476 (535)
++| .....+....++...+.. ...+... ......++.|++.+....+......+..|+++++++.|+.
T Consensus 319 ~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 389 (485)
T TIGR00711 319 DPR---------KLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLS 389 (485)
T ss_pred CcH---------HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHH
Confidence 754 223333333333333332 2222232 3344456677777666666666666778999999999999
Q ss_pred HHhhhhhhhHHHHHHHHHhcc
Q 009409 477 NTVGAVPGIVGVALTGYLLDS 497 (535)
Q Consensus 477 ~~~~~lg~~igp~i~G~l~~~ 497 (535)
++.+.+|+.+|+.+.|.+.+.
T Consensus 390 ~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 390 NFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999874
No 37
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.2e-31 Score=271.99 Aligned_cols=384 Identities=17% Similarity=0.134 Sum_probs=264.3
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhhHhhhhh-hhccc--CCCccchhHHH-----HHHHHHHHhhhccchhhhcccCCchh
Q 009409 110 PQRYKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRF--GWNSSVAGLVQ-----SSFFWGYALSQLPGGWLAKIFGGRKV 181 (535)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--g~s~~~~~~~~-----s~~~~~~~~~~~~~g~l~dr~g~r~~ 181 (535)
+++++.+....+.+++.++|...++...|. +.+++ +.++. .+++. ++.+++..+++++.|+++||+|||++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 335577777888889999999999988775 55555 66666 45553 34556677889999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhh--------HHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHH
Q 009409 182 LQTGVLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSV 253 (535)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 253 (535)
+..+.+++++++++.+ +++++. .++++|+++|++.+..++....++.|++|+++|++..+....+..+|.+
T Consensus 97 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~ 175 (438)
T PRK09952 97 LMLTVWMMGIATALIG-LLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL 175 (438)
T ss_pred HHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999998875 566655 5889999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHhc--------cccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCC
Q 009409 254 AGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLK 325 (535)
Q Consensus 254 ~g~~~~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (535)
+++.+...+. +.+|||+.|++.++..++........||+++.... +.+ . + +.+.+
T Consensus 176 l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~----~~~----~-------~--~~~~~ 238 (438)
T PRK09952 176 LSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQ----QHE----Q-------A--AAKKR 238 (438)
T ss_pred HHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHH----Hhh----c-------c--ccccc
Confidence 9888776654 25799999998877654433332233332211000 000 0 0 00000
Q ss_pred CCcHHHhhhcHHHHHHHH-HHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC
Q 009409 326 DVPWKAIFRSKAVWAMIY-AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (535)
Q Consensus 326 ~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 404 (535)
....+.++++|+.+...+ ..++.....+....|.|.|+++.+|++......+....++..+++.++.|+++||+++|
T Consensus 239 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr-- 316 (438)
T PRK09952 239 IPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR-- 316 (438)
T ss_pred CCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch--
Confidence 111234667777766543 45556667788889999999888899887665566666777888899999999999865
Q ss_pred CchhHHHHHHHHHHHHHHHHHH-H-hhhcCCCcHHH-HHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhh-
Q 009409 405 ETTMVRKICQTIAFLSPAVCMT-L-SSIDLGLPHWE-IVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVG- 480 (535)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~- 480 (535)
+ .. ..+.+...+... . ......+..+. +...++.+++.+...........+.+|++.|+++.|+.+..+
T Consensus 317 -----~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~ 389 (438)
T PRK09952 317 -----R-VY-ITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVAS 389 (438)
T ss_pred -----H-HH-HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHH
Confidence 2 21 222222222111 1 11112222332 223333445544444445556677789999999999976655
Q ss_pred hhhhhHHHHHHHHHhccc-CcchHHHHHHHHHHHHHHHhhhh
Q 009409 481 AVPGIVGVALTGYLLDST-HSWSMSLFAPSIFFYLTGTIVWL 521 (535)
Q Consensus 481 ~lg~~igp~i~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 521 (535)
.+|+.++|.+.|++.+.. ++|...+.+.+++.++..+..+.
T Consensus 390 ~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 390 VVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999865 45777777766666655555443
No 38
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.2e-31 Score=271.94 Aligned_cols=359 Identities=14% Similarity=0.107 Sum_probs=248.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHH-HHHH-----HHHHhhhccchhhhcccCCchhhHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQ-SSFF-----WGYALSQLPGGWLAKIFGGRKVLQTG 185 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~-s~~~-----~~~~~~~~~~g~l~dr~g~r~~~~~~ 185 (535)
|++....+++..++.++|+..++...|.+.++++.+..+.+.+. +... +...+++++.|+++||+|||+.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 45678888899999999999999999999999999888765443 3222 22246789999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhh--------HHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhh
Q 009409 186 VLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (535)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~--------~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 257 (535)
.++++++.++++ ++++++ .++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+++.
T Consensus 93 ~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 93 LSIMASGTLLIA-FVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHHHH-hCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 999999998876 555655 46899999999999999999999999999999999999999988888888888
Q ss_pred hHHHhc--------cccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcH
Q 009409 258 LAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPW 329 (535)
Q Consensus 258 ~~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (535)
+++.+. +..|||++|++..+...+........+|+++ ....++ +.+ .+..+
T Consensus 172 ~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~-----------~~~~~~---------~~~-~~~~~ 230 (434)
T PRK15075 172 LGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEE-----------FLARKH---------RPS-MREIF 230 (434)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHH-----------HHHhhh---------ccc-cccHH
Confidence 877663 4679999999754432222211111111100 000000 000 01123
Q ss_pred HHhhhcHHHHHH-HHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchh
Q 009409 330 KAIFRSKAVWAM-IYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM 408 (535)
Q Consensus 330 ~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 408 (535)
+...++++.+.. .+..++.....+.+..|.|.|+++.+|++..+.+++..+..++++++.++.|+++||+++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r------ 304 (434)
T PRK15075 231 RSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR------ 304 (434)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch------
Confidence 344555555544 3334445566777889999999988899999999888888999999999999999999865
Q ss_pred HHHHHHHHHHHHHHHHHH-H-hhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhh-hhh
Q 009409 409 VRKICQTIAFLSPAVCMT-L-SSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAV-PGI 485 (535)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l-g~~ 485 (535)
+............... . ...............++.+++.+...........+..|++.|+++.|+.+.++.. ++.
T Consensus 305 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~ 382 (434)
T PRK15075 305 --PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGG 382 (434)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhh
Confidence 2222111111111111 1 1111122222222233344444444444445567778999999999997655554 588
Q ss_pred HHHHHHHHHhcccCc
Q 009409 486 VGVALTGYLLDSTHS 500 (535)
Q Consensus 486 igp~i~G~l~~~~g~ 500 (535)
++|.+.|.+.|..|.
T Consensus 383 ~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 383 FTPAISTWLIHVTGD 397 (434)
T ss_pred hHHHHHHHHHHhcCC
Confidence 899999999998863
No 39
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=2.5e-32 Score=281.58 Aligned_cols=405 Identities=18% Similarity=0.190 Sum_probs=274.3
Q ss_pred HHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCC--------ccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHH
Q 009409 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWN--------SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGV 186 (535)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s--------~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 186 (535)
..+++.+..+...++...+.+.+|.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||++++.+.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~ 108 (481)
T TIGR00879 29 LSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIA 108 (481)
T ss_pred HHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHH
Confidence 333444555666778888888899888888777 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhh--hhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhH---HH
Q 009409 187 LIWSLATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA---PP 261 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~--~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~ 261 (535)
+++.++.++...... +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++++++ +.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~ 188 (481)
T TIGR00879 109 LLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVS 188 (481)
T ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 998888877643333 2348999999999999999999999999999999999999999999999999999999 66
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhh---------hhh------hhHHHhccCCCC
Q 009409 262 IIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK---------SLS------ASLEEMGESLKD 326 (535)
Q Consensus 262 l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~------~~~~~~~~~~~~ 326 (535)
..+..+||+.|++.++..++..+..++++++++....+...++.....++ ... ....+.+.....
T Consensus 189 ~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (481)
T TIGR00879 189 LNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQ 268 (481)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhcc
Confidence 66778999999997776666666666666654211100000000000000 000 000000000011
Q ss_pred CcHHHhhh------cHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 009409 327 VPWKAIFR------SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (535)
Q Consensus 327 ~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~ 400 (535)
..++..++ .+.++...+..+...........+.|.+++ .+|++..+.+.......++.+++.++.+++.||++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 347 (481)
T TIGR00879 269 PSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE-NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFG 347 (481)
T ss_pred ccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11233332 233333344444444444556677787775 57999988888889999999999999999999998
Q ss_pred HcCCCchhHHHHHHHHHHHHHHHHHHHhh---hcCCC------cHHHHHHHHHHHHHHhh-hhhhhhhhhhhccCCcchh
Q 009409 401 ATGVETTMVRKICQTIAFLSPAVCMTLSS---IDLGL------PHWEIVGILTAGLALSS-FALSGLYCTHQDISPEYAS 470 (535)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g 470 (535)
+|+ ....+....++++.+.. ..... ....+....+.+.+.+. ..+.......+..|++.|+
T Consensus 348 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 418 (481)
T TIGR00879 348 RRP---------LLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRP 418 (481)
T ss_pred chH---------HHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHH
Confidence 651 22222222222222221 11111 22222222222222222 2233333446667888999
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhccCCCCCC
Q 009409 471 ILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN 530 (535)
Q Consensus 471 ~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (535)
++.|+.+...++|.+++|.+.|.+.+..+ +...|.+.+++.++++++.+...++.|+++
T Consensus 419 ~~~~~~~~~~~lg~~i~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 477 (481)
T TIGR00879 419 KGISIAVAANWLANFIVGFLFPTMLESIG-VGGVFIFFGGLNVLGLIFVYFFLPETKGRT 477 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccceehhHHHHHHHHHHHHheecccCCCCC
Confidence 99999999999999999999999999874 777787777766666666665555554433
No 40
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=2.2e-31 Score=266.67 Aligned_cols=353 Identities=18% Similarity=0.206 Sum_probs=266.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
++.+..+.+..+....+...+.+.+|.+.+++|.|..+.+++.+++.++..++++++|+++||+|||+++..+.++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS 83 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 35555555556677788888999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHH
Q 009409 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (535)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f 272 (535)
.++.. ..++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++++.+..+||+.|
T Consensus 84 ~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 162 (385)
T TIGR00710 84 SLGLA-LSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIF 162 (385)
T ss_pred HHHHH-HHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 87764 56778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh-cccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhh
Q 009409 273 YIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (535)
Q Consensus 273 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (535)
++.+++.++..+.... .|++++.+.+ ++.+ + ....+++.+++|+++...+...+....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR00710 163 AFLSLAGILLSALIFFILPETLPYEAR---IQIS-----T-------------YFETFLLLLKSKMFWGYALIYGASFGG 221 (385)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccc---CCHH-----H-------------HHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 9988877665444433 4443222111 0000 0 001245678889888887777777777
Q ss_pred hHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHh--h
Q 009409 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS--S 429 (535)
Q Consensus 352 ~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 429 (535)
.+....+.|.++++.+|+++.+.+.+.....++.++++++.+++.||+++| +... .+.....+...+. .
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~ 292 (385)
T TIGR00710 222 FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK-------SLLR--MGLILFAVSAVLLEIT 292 (385)
T ss_pred HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-------HHHH--HHHHHHHHHHHHHHHH
Confidence 788888999999888999999999999999999999999999999999865 2221 1222222111111 1
Q ss_pred hcCC-CcH-HHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcc
Q 009409 430 IDLG-LPH-WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 497 (535)
Q Consensus 430 ~~~~-~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~ 497 (535)
.... ... ..+...++.+++.+...+.......+.. |++++++.++.+.....++.+.+.+.|.+.+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~ 361 (385)
T TIGR00710 293 AILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDF-PHVAGTASALFGTLRLVLGAIVGYLVSLIHGN 361 (385)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-cccchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 1111 122 2233344455555555555544444444 57899999999998887666666677755443
No 41
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=8.2e-32 Score=278.93 Aligned_cols=391 Identities=16% Similarity=0.168 Sum_probs=266.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHH
Q 009409 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (535)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (535)
.+++.+..+++.+++..++....++.+|.+.+++|+|..+.+++.+.+.+++.++.++.|+++||+|||+++..+.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 35677778888899999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhH
Q 009409 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (535)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 270 (535)
++.++.+ ..++++.+++.|++.|++.+...+....++.|++++++|++++++...+..+|..++|.+++.+.+..+||+
T Consensus 97 ~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 175 (496)
T PRK03893 97 VGTLACG-FAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRA 175 (496)
T ss_pred HHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Confidence 8887775 567789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhc---------------cCCCCCcHH-----
Q 009409 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMG---------------ESLKDVPWK----- 330 (535)
Q Consensus 271 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~----- 330 (535)
.|++.++..++.++....+|++++....+..+.+.....+.......+... .......+.
T Consensus 176 ~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (496)
T PRK03893 176 LFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLG 255 (496)
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHH
Confidence 998755444433333334444322111100000000000000000000000 000000000
Q ss_pred ------------H--hhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHH
Q 009409 331 ------------A--IFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFA 396 (535)
Q Consensus 331 ------------~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~ 396 (535)
+ ..+.+......+..++.....+....++|.|+++.+|++..+.+.+.+...++.+++.++.|++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~ 335 (496)
T PRK03893 256 LLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLG 335 (496)
T ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00001111111111111112224567899999878899999999999999999999999999999
Q ss_pred HHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHH-HHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHH
Q 009409 397 DNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEI-VGILTAGLALSSFALSGLYCTHQDISPEYASILLGI 475 (535)
Q Consensus 397 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 475 (535)
||+++| +. ...+..+..+.............+.. ...+..+...............+.+|++++|+++|+
T Consensus 336 dr~g~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 406 (496)
T PRK03893 336 DWLGTR--------KA-YVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGF 406 (496)
T ss_pred HHhcch--------HH-HHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccch
Confidence 999865 12 22222222222222221122222222 222222222222233344456667888999999999
Q ss_pred HHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHH
Q 009409 476 TNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF 512 (535)
Q Consensus 476 ~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~ 512 (535)
.+....+|+.+||.+.|.+.|..| +...+...+++.
T Consensus 407 ~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~~~~~~ 442 (496)
T PRK03893 407 TYNVGALGGALAPILGALIAQRLD-LGTALASLSFSL 442 (496)
T ss_pred hhhhhhHHHHHHHHHHHHHhccCC-hHHHHHHHHHHH
Confidence 999999999999999999999985 766665544333
No 42
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=4.9e-33 Score=274.95 Aligned_cols=347 Identities=26% Similarity=0.406 Sum_probs=269.7
Q ss_pred HHHHHHHHhhhhhhHhhhh-hhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHh
Q 009409 120 SLAFVICNMDKVNLSVAII-PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (535)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (535)
++..++..++...+.+.+| .+.+++|.|..+.+++.+++.++..++++++|+++||+|||+++.++.++.+++.++..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~- 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA- 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh-
Confidence 4667788888889999999 79999999999999999999999999999999999999999999999999988855554
Q ss_pred hhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHH
Q 009409 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (535)
Q Consensus 199 ~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~ 278 (535)
++++.+.+++.|++.|++.+...+...+++.|++|+++|++++++......+|.+++|.+++++.+..+||+.|++.+++
T Consensus 81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~ 160 (352)
T PF07690_consen 81 FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAIL 160 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHH
T ss_pred hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccch
Confidence 44556799999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHH-hhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCC-cHHHhhhcHHHHHHHHHHHHHhhhhHHHH
Q 009409 279 GIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDV-PWKAIFRSKAVWAMIYAHFCGSWGHYTCL 356 (535)
Q Consensus 279 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 356 (535)
.++..++ ..+++++++++..+...+++. . ++.... .++.+.++|.+|...+..++.........
T Consensus 161 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (352)
T PF07690_consen 161 SLIAAILFILFLPEPPPPRERESPKESES-K-------------KPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFS 226 (352)
T ss_dssp HHHHHHHHHCCC---STTTT--SSTTTT----------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHhhhhhhccccccccccccccc-c-------------cccccccccccccccchhhhhhhhhhHHHHHHHHhh
Confidence 8777653 234444333332222211100 0 000011 24677777877756666666666778899
Q ss_pred HhhHHHHHHHhCCC-hhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCc
Q 009409 357 SWLPTYFSEELSLN-LTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP 435 (535)
Q Consensus 357 ~~~p~~l~~~~g~s-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (535)
.++|.|+.+.+|++ ..+.+.+.....+.++++.++.+++.||++++ +......................++.
T Consensus 227 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (352)
T PF07690_consen 227 FFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-------RRLLIAILLLILGALGLLLLPFSSSP 299 (352)
T ss_dssp HHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-------HHHHHHHHHHHHHHHHHCCSHHHCHH
T ss_pred cccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-------HHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 99999988889999 89999999999999999999999999998753 22222222222222222222222344
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHH
Q 009409 436 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGV 488 (535)
Q Consensus 436 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp 488 (535)
.+.++..++.|++.+...+.......+..|++++|++.|+.++..++|+.+||
T Consensus 300 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 55666677788887777778888888889999999999999999999999987
No 43
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=1.8e-31 Score=266.30 Aligned_cols=360 Identities=13% Similarity=0.071 Sum_probs=265.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
.+.+..+.+..++..++.....+.+|.+.+++|.|..++|++.+.+.+++.++++++|+++||+|||+++..+.++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~ 84 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAG 84 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566777888888899999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHH
Q 009409 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (535)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f 272 (535)
..+.+ .+++++.++++|+++|++.+...+...+.+.+..++++|+++++++..+.++|..+||.+++.+.+...|...
T Consensus 85 ~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~- 162 (381)
T PRK03633 85 CAGLG-LMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLP- 162 (381)
T ss_pred HHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHH-
Confidence 87764 5778899999999999999988888888888889889999999999999999999999999998775433333
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhh
Q 009409 273 YIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (535)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (535)
+..++........ .+.+.+++..+ + + +..++++.+++|.++......+......
T Consensus 163 ~~~~~~~~~~~~~-~~~~~~~~~~~-~--~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (381)
T PRK03633 163 WVTGLVLAAILPL-LFTRILNQQAE-N--H----------------------DSTSIWPMLKLRQARLGVNGCIISGIVL 216 (381)
T ss_pred HHHHHHHHHHHHH-HHhcccCCCCC-C--C----------------------CCCCHHHHHHhcchHHHHHHHHHHHHHH
Confidence 3322222221111 11111111100 0 0 0112356677877776555455555555
Q ss_pred HHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcC
Q 009409 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL 432 (535)
Q Consensus 353 ~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (535)
.....++|.|+++ .|.+..+.+.+.+...++.++++...+++.||+++| .....+.....+......
T Consensus 217 ~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~---------~~l~~~~~~~~~~~~~~~--- 283 (381)
T PRK03633 217 GSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL---------LVLRVQVFVVILGSIAML--- 283 (381)
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH---------HHHHHHHHHHHHHHHHHh---
Confidence 6667889999975 699999999999999999999999999999999764 122222222222222211
Q ss_pred CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHH
Q 009409 433 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF 512 (535)
Q Consensus 433 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~ 512 (535)
. ........++.+.+.....+.......+..++++++.+.+..+...++|..+||.++|++.|.+| +...|.+.+.+.
T Consensus 284 ~-~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~ 361 (381)
T PRK03633 284 S-QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVS 361 (381)
T ss_pred h-hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHH
Confidence 1 11222333445554444556666666677788888888888888899999999999999999985 777887766655
Q ss_pred HHH
Q 009409 513 YLT 515 (535)
Q Consensus 513 ~~~ 515 (535)
++.
T Consensus 362 l~~ 364 (381)
T PRK03633 362 FIY 364 (381)
T ss_pred HHH
Confidence 433
No 44
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.9e-33 Score=276.20 Aligned_cols=385 Identities=16% Similarity=0.225 Sum_probs=275.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhh-hhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
..++..++..++..+.+...++.. +..+.+|.+....+.+.+.++++++|++++++++.+.||++..+.+....+++++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~ 123 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGL 123 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHH
Confidence 346667778888888998887766 5558899999999999999999999999999999999999999999999898888
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhc------cc
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII------EN 265 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------~~ 265 (535)
..++.+ ..++++.+++.|++.|+..+..+|....+++.||.++||++.+|++++..++|+++|++++..+. ..
T Consensus 124 ~~~~~~-~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~ 202 (495)
T KOG2533|consen 124 FGFLTA-AVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL 202 (495)
T ss_pred HHHHHH-HHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc
Confidence 887765 47888999999999999999999999999999999999999999999999999999999999863 35
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHH
Q 009409 266 LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH 345 (535)
Q Consensus 266 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (535)
.||||.|++.++++++..++.++..++.+.+..-..++++....++..........++.++..+++.+++|.+|.+.+..
T Consensus 203 ~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~ 282 (495)
T KOG2533|consen 203 AGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCY 282 (495)
T ss_pred CCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHH
Confidence 68999999999998877655544444444433333333332222222212222222225667788999999999999999
Q ss_pred HHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHH-HHHHHHHH
Q 009409 346 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI-AFLSPAVC 424 (535)
Q Consensus 346 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~-~~~~~~~~ 424 (535)
++.....+++.+|+|.|+.+..|++..++..+.++..++++++.+++|.++||...- . .++..... ..+...+.
T Consensus 283 ~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~----~-~~~~~~~~~~~~~~~~g 357 (495)
T KOG2533|consen 283 FFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTI----F-ARRLLFIVFLCLYAIIG 357 (495)
T ss_pred HHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhh----H-HHHHHHHHHHHHHHHHH
Confidence 999999999999999999875679999999999999999999999999999996300 0 02222222 22222223
Q ss_pred HHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcc-hhHHHHHHHHhhhhhhhHHHH-HHHHHhcccCcch
Q 009409 425 MTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY-ASILLGITNTVGAVPGIVGVA-LTGYLLDSTHSWS 502 (535)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~lg~~igp~-i~G~l~~~~g~~~ 502 (535)
....... ........+.+....+.....+...........++. +-+..+......+.++.++|. ..+.....+ .+.
T Consensus 358 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y-~~~ 435 (495)
T KOG2533|consen 358 AISLLAA-AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRY-GWG 435 (495)
T ss_pred HHHHHhh-ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcch-hhh
Confidence 2222222 223333333333333333334444444555454444 334444444444444444443 334444444 355
Q ss_pred HHH
Q 009409 503 MSL 505 (535)
Q Consensus 503 ~~~ 505 (535)
..|
T Consensus 436 ~~f 438 (495)
T KOG2533|consen 436 AVF 438 (495)
T ss_pred hHH
Confidence 566
No 45
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=3.7e-31 Score=266.09 Aligned_cols=368 Identities=15% Similarity=0.151 Sum_probs=267.6
Q ss_pred HHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHH
Q 009409 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (535)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (535)
....+.+..+...+....+.+.+|.+.+++|.+..+.++..+++.+++.++++++|+++||+|||++++.+.++++++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 96 (413)
T PRK15403 17 FPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACA 96 (413)
T ss_pred HHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHH
Confidence 33444555666778888999999999999999999999999999999999999999999999999999999999998887
Q ss_pred HHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHH
Q 009409 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (535)
Q Consensus 195 ~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~ 274 (535)
+.. .+++++.++++|+++|++.+...+....++.|+++++++++++++......+|..+||++++.+.++.|||+.|++
T Consensus 97 ~~~-~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~ 175 (413)
T PRK15403 97 ATL-FTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAI 175 (413)
T ss_pred HHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 764 6788899999999999998877777788899999999999999999999999999999999999988999999999
Q ss_pred HHHHHHHHHHH-hhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhH
Q 009409 275 FGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (535)
Q Consensus 275 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (535)
.+++.++..+. .+.+|+++++++++ .+. +. . ...++.+++||.+|...+..++.....+
T Consensus 176 ~~~~~~i~~~~~~~~lp~~~~~~~~~-~~~------~~----~---------~~~~~~ll~~~~~~~~~l~~~~~~~~~~ 235 (413)
T PRK15403 176 IAVMGLIAFVGLLLAMPETVKRGAVP-FSA------KS----V---------LRDFRNVFRNRLFLTGAATLSLSYIPMM 235 (413)
T ss_pred HHHHHHHHHHHHHHhCCCCccccCCC-CCh------HH----H---------HHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 98887665544 34456543221110 000 00 0 0124678899999998888888888888
Q ss_pred HHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHH-Hh-hhc
Q 009409 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT-LS-SID 431 (535)
Q Consensus 354 ~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~ 431 (535)
.+..+.|.++++.+|+++.+.++.......+..++..+.+++.+|..++ |...........+..+. .. ...
T Consensus 236 ~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~-------~~~~~~~~~~~ig~~l~~~~~~~~ 308 (413)
T PRK15403 236 SWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEP-------RFIWRAVPIQLVGLALLIVGNLLW 308 (413)
T ss_pred HHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch-------hHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8888999999988999999999988878888888777777765443221 11101111111111111 11 111
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHH
Q 009409 432 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 511 (535)
Q Consensus 432 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~ 511 (535)
.+...+.++..++.+.+.+...+....... ......+|++.|+.+.....+..+++...|++.+.. -...|...+++
T Consensus 309 ~~~~~~~~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~ 385 (413)
T PRK15403 309 PHVWLWSVLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG--GRLPFHLLAVV 385 (413)
T ss_pred cccHHHHHHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CchHHHHHHHH
Confidence 222222344555555555554444443221 122334799999999999999999999999998874 34455444443
Q ss_pred HH
Q 009409 512 FY 513 (535)
Q Consensus 512 ~~ 513 (535)
+.
T Consensus 386 ~~ 387 (413)
T PRK15403 386 AG 387 (413)
T ss_pred HH
Confidence 33
No 46
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=2.5e-31 Score=266.64 Aligned_cols=366 Identities=16% Similarity=0.121 Sum_probs=259.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
+.+..+.+..++..+......+.+|. +.+++|.|..+.|++.+++.+++.++++++|+++||+|||++++.+.++..++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLA 94 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHH
Confidence 33444555666777778888888886 67899999999999999999999999999999999999999999988776665
Q ss_pred HHHHHh-------hhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc
Q 009409 193 TALLPL-------LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (535)
Q Consensus 193 ~~~~~~-------~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (535)
.+.... ..++++.+++.|+++|++.+...+...+++.+++|+++|++++++...+..+|.++||++++++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~ 174 (392)
T PRK12382 95 GLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH 174 (392)
T ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 432211 1346788999999999999988888889999999999999999999999999999999999999998
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHH
Q 009409 266 LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH 345 (535)
Q Consensus 266 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (535)
.|||+.+++..+..++.+......++.++++ .++ . ++++..+ .++...+..
T Consensus 175 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~----------------------~~~~~~~--~~~~~~~~~ 225 (392)
T PRK12382 175 FGFAALALTTMVLPLLAWAFNGTVRKVPAHA----GER-P----------------------SLWSVVG--LIWKPGLGL 225 (392)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhccCCCCCc----ccC-c----------------------hHHHHHH--HHHHhHHHH
Confidence 9999887766554433332222222211100 000 0 0111111 122222223
Q ss_pred HHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHH
Q 009409 346 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCM 425 (535)
Q Consensus 346 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (535)
++..........+.|.|+++ .|.+ ..+.......++.++++++.|++.||+++++. . ..+.....+..
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-------~--~~~~~~~~~~~ 293 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV-------A--IVSLLVETVGL 293 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-------h--HHHHHHHHHHH
Confidence 33344555667888888865 4665 34556666777888999999999999986522 1 12222222222
Q ss_pred HHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHH
Q 009409 426 TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSL 505 (535)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~ 505 (535)
.+... .++.....+..++.+++.+...+.......+..++++||++.|+.++...+|..++|.+.|.+.|..| |...|
T Consensus 294 ~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~ 371 (392)
T PRK12382 294 LLLWL-APTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVF 371 (392)
T ss_pred HHHHH-cccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHH
Confidence 22222 23334444455566666665555555566677899999999999999999999999999999999885 88888
Q ss_pred HHHHHHHHHHHHhhhhh
Q 009409 506 FAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 506 ~~~~~~~~~~~~~~~~~ 522 (535)
.+.+++.++..++.+..
T Consensus 372 ~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 372 LAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 88877666665555443
No 47
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=7.1e-31 Score=265.30 Aligned_cols=366 Identities=14% Similarity=0.161 Sum_probs=271.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
..+..+.+.++...+......+..|.+++++|+|..+.++..+.+.+++.+++++.|++.||+|||+++..+.++++++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~ 105 (438)
T PRK10133 26 IPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGA 105 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 45566677788888899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHH--hhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcc-c-----
Q 009409 194 ALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-N----- 265 (535)
Q Consensus 194 ~~~~--~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~----- 265 (535)
+++. ..+++++.++++|+++|+|.+...+..+.++.++.++++|...+++.+....+|..++|.+++.+.. .
T Consensus 106 ~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~ 185 (438)
T PRK10133 106 ALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQS 185 (438)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 7642 3567889999999999999999999999999998777777778999999999999999999876541 0
Q ss_pred --------------------cchhHHHHHHHHHHHHHHHHh--hhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccC
Q 009409 266 --------------------LGWESVFYIFGLLGIAWFSGF--KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGES 323 (535)
Q Consensus 266 --------------------~gw~~~f~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (535)
.+||++|+....+..+..+.. ..+|+.++++. .++ + ..
T Consensus 186 ~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~---~~~-~----------------~~ 245 (438)
T PRK10133 186 QDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH---SDA-K----------------QG 245 (438)
T ss_pred hhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc---ccc-c----------------cc
Confidence 256666765443332222222 22232111100 000 0 00
Q ss_pred CCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHH-HHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Q 009409 324 LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF-SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (535)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~ 402 (535)
......++++++|.++...+..++.....+....|.+.|+ ++.+|+++.++++......++.++++++.+++.||+++|
T Consensus 246 ~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~ 325 (438)
T PRK10133 246 SFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH 325 (438)
T ss_pred chhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 0011246788999988887777888888888888999885 567899999999999999999999999999999999865
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhh
Q 009409 403 GVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAV 482 (535)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l 482 (535)
+.. ..+.++.+..+.+..... . .+....+.+.|++.+...+.......+..+ ++.+++.++..+ ..+
T Consensus 326 --------~~l-~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~glg~~~i~P~~~s~a~~~~~-~~~~~as~l~~~-~~~ 392 (438)
T PRK10133 326 --------KVL-AAYALIAMALCLISAFAG-G-HVGLIALTLCSAFMSIQYPTIFSLGIKNLG-QDTKYGSSFIVM-TII 392 (438)
T ss_pred --------HHH-HHHHHHHHHHHHHHHHcC-C-hHHHHHHHHHHHHHHHHHHHHHHHHHcccc-hhhccchhHHhH-Hhc
Confidence 222 222222222222222222 2 233456667888888888887777777544 457788888764 557
Q ss_pred hhhHHHHHHHHHhcccCcchHHHHHHHHHH
Q 009409 483 PGIVGVALTGYLLDSTHSWSMSLFAPSIFF 512 (535)
Q Consensus 483 g~~igp~i~G~l~~~~g~~~~~~~~~~~~~ 512 (535)
|+.++|.+.|.+.|..|+....|.+..++.
T Consensus 393 g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~ 422 (438)
T PRK10133 393 GGGIVTPVMGFVSDAAGNIPTAELIPALCF 422 (438)
T ss_pred cchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 899999999999998754667776544433
No 48
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=4.7e-31 Score=266.37 Aligned_cols=376 Identities=14% Similarity=0.117 Sum_probs=271.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccc-----hhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSV-----AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLI 188 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 188 (535)
+.+..+.+..++..++...+.+.+|.+.+++|.+..+ .|++.+++.++..++.+++|+++||+|||+++..+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 93 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALG 93 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHH
Confidence 3344556667777888888999999999999998665 48899999999999999999999999999999999988
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccch
Q 009409 189 WSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (535)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (535)
.+++.++.. ..++++.+++.|++.|++.+ ..+....++.+.+++++|++++++......+|.+++|.+++.+.+..+|
T Consensus 94 ~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 171 (408)
T PRK09874 94 MGIVMVLMG-LAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGL 171 (408)
T ss_pred HHHHHHHHH-HHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 888876664 56778899999999999865 5677788899999999999999999999999999999999999998999
Q ss_pred hHHHHHHHHHHHHHHHHhh-hcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHH-HHHHH
Q 009409 269 ESVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAM-IYAHF 346 (535)
Q Consensus 269 ~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 346 (535)
|+.|++.+++.++..+... +.+++++..+++ ++. . .+ ...+.+++++++.. ....+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~--------~~---------~~~~~~~~~~~~~~~~~~~~ 229 (408)
T PRK09874 172 RPVFFITASVLFLCFLVTLFCIRENFQPVSKK--EML---H--------MR---------EVVTSLKNPKLVLSLFVTTL 229 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcccccch--hhh---H--------HH---------HHHHhCcCCchHHHHHHHHH
Confidence 9999999887765544443 344332111100 000 0 00 01234556665443 33333
Q ss_pred HHhhhhHHHHHhhHHHHHHHhCCChh---hHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHH
Q 009409 347 CGSWGHYTCLSWLPTYFSEELSLNLT---EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV 423 (535)
Q Consensus 347 ~~~~~~~~~~~~~p~~l~~~~g~s~~---~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (535)
+..........++|.|+.+..+.... ..+.+....+++.+++.+..|++.||+++++ ....+.....+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~---------~~~~~~~~~~~ 300 (408)
T PRK09874 230 IIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEK---------ILITALIFSVL 300 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch---------hHHHHHHHHHH
Confidence 44444455667888888765433221 2455666677888889999999999998652 12222222222
Q ss_pred HHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchH
Q 009409 424 CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM 503 (535)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~ 503 (535)
....... ..+.+...+..++.|++.+...+.......+..+++++|+.+|+.+....+|..+||.++|.+.+..| |..
T Consensus 301 ~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~ 378 (408)
T PRK09874 301 LLIPMSF-VQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRA 378 (408)
T ss_pred HHHHHHH-hccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhH
Confidence 2222222 22334444555667777776666666666667788999999999999999999999999999999874 888
Q ss_pred HHHHHHHHHHHHHHhhhhhcc
Q 009409 504 SLFAPSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~ 524 (535)
.|.+.+++.++..++.+...+
T Consensus 379 ~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 379 VFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 998888776666655554443
No 49
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=8.4e-31 Score=263.68 Aligned_cols=352 Identities=13% Similarity=0.130 Sum_probs=264.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
+.+..+.+..++.++....+.+.+|.+.+++|.+..+.+++.+++.+++.++++++|+++||+|||+++..+.++..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 85 (401)
T PRK11043 6 GFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGS 85 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHH
Confidence 33444444455677788888999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHH
Q 009409 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (535)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 273 (535)
++.. ..++++.+++.|++.|++.+...+...+++.|+++++++++..+.......+|..++|.+++++.+..|||+.|+
T Consensus 86 ~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~ 164 (401)
T PRK11043 86 LGML-WVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFA 164 (401)
T ss_pred HHHH-HhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHH
Confidence 7764 567788999999999999888888888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhH
Q 009409 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (535)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (535)
+.+++.++..+..+.++++++++++ ++ ++..+++.+++|.++...+...+.....+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (401)
T PRK11043 165 TLFAITLLLILPTLRLKPSKKARKQ----SQ--------------------DALTFKQLLKSKTYLGNVLIFAACSAAFF 220 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCcccc----ch--------------------HHHHHHHHHcChhHHHHHHHHHHHHHHHH
Confidence 9888877666555555543321110 00 01124677888888776666666666667
Q ss_pred HHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhh-cC
Q 009409 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI-DL 432 (535)
Q Consensus 354 ~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 432 (535)
....+.|.++++ +|+++.+.|+......++.++++++.+++.||+++++. .+ .......+....+.+... ..
T Consensus 221 ~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~ 293 (401)
T PRK11043 221 AWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQL-----LP-WLLVLFAVSVIAIWLASLLSH 293 (401)
T ss_pred HHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH-----HH-HHHHHHHHHHHHHHHHHHhcc
Confidence 778889999865 79999999988888888888999999999999876411 11 111111111111111111 12
Q ss_pred CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhccc
Q 009409 433 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 498 (535)
Q Consensus 433 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~ 498 (535)
......+....+.+++.+...+.......+. .|+++|++.|+.++.+..++..++.+.|.+.+..
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 294 PSLVPLLIPFCVMAAANGAIYPIVVAQALRP-FPQATGKAAALQNTLQLGLCFLASLLVSALISTP 358 (401)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CcccChHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 2222333344455666665555544444443 3578999999999999999999999999998854
No 50
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=8.4e-31 Score=261.45 Aligned_cols=362 Identities=14% Similarity=0.026 Sum_probs=261.2
Q ss_pred HHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHH-HHHHHHHHHHHHHh
Q 009409 121 LAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT-GVLIWSLATALLPL 198 (535)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~-~~~~~~~~~~~~~~ 198 (535)
+.+++..++.....+.+|. +.+++|.|..+.|++.+++.+...+.+++.|+++||+|||+.++. +.++..++.++. .
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~-~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF-A 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH-H
Confidence 4577778888888998887 578899999999999999999999999999999999999887665 444444455454 4
Q ss_pred hhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhH--HHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHH
Q 009409 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA--VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFG 276 (535)
Q Consensus 199 ~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~ 276 (535)
.+++++.+++.|++.|.+.+...|...++..++.++++|++. .++...+.++|.++||++++++.+..|||+.|++.+
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~ 162 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAA 162 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHH
Confidence 677778888999999988888888888888888887777654 688888899999999999999999999999999998
Q ss_pred HHHHHHHHHh-hhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHH
Q 009409 277 LLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (535)
Q Consensus 277 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (535)
++.++..+.. +.+|+++++..++. . ..+.+..++++.++...+..++........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPRGAPGAL-T-----------------------RLEVRGLLASRDTRLLFVACTLMWGCNILY 218 (375)
T ss_pred HHHHHHHHHHHHhCCCcccCccccc-C-----------------------cchhhhhhcCcchHHHHHHHHHHHHHHHHH
Confidence 8776655444 34555332211100 0 001234556777766655555555555566
Q ss_pred HHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCc
Q 009409 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP 435 (535)
Q Consensus 356 ~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (535)
..++|.|+++.+|.++.+.+.+........+++.++.+++.||+++|+ ......+...+....... .++.
T Consensus 219 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~---------~~~~~~~~~~~~~~~~~~-~~~~ 288 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR---------LMLLAALAGVAFYTGLAA-DNSL 288 (375)
T ss_pred HhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchh---------HHHHHHHHHHHHHHHHHH-HHHH
Confidence 778899998889999999998887777778888999999999998652 122222222222222222 1222
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Q 009409 436 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 515 (535)
Q Consensus 436 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~ 515 (535)
+......++.+++.+...+.......+ ..|++++++.|+.+...++|..++|.+.|.+.+..| +...|.+.+++.+++
T Consensus 289 ~~~~~~~~~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~ 366 (375)
T TIGR00899 289 WALLMLQLLNAIFIGILAGIGMLYFQD-LMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVA 366 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHH
Confidence 333334444555555444444444444 456677899999999999999999999999999874 888888877766555
Q ss_pred HHhh
Q 009409 516 GTIV 519 (535)
Q Consensus 516 ~~~~ 519 (535)
.++.
T Consensus 367 ~~~~ 370 (375)
T TIGR00899 367 LFCL 370 (375)
T ss_pred HHHH
Confidence 5444
No 51
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=3.3e-31 Score=273.24 Aligned_cols=407 Identities=16% Similarity=0.166 Sum_probs=267.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhccc--------CCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRF--------GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ 183 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~ 183 (535)
..+..+...++.+..+++...+++..|.+.+++ |.+..+.+++.+++.++..++++++|+++||+|||++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 456666777788888899999999888888877 888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh-----------hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHH
Q 009409 184 TGVLIWSLATALLPLL-----------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS 252 (535)
Q Consensus 184 ~~~~~~~~~~~~~~~~-----------~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 252 (535)
++.++++++.++.++. .+.+..++++|+++|++.+...+...++++|++|+++|++++++...+..+|.
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 9999988887665431 12246788999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHhc--------cccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhh-----hhhhHHH
Q 009409 253 VAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKS-----LSASLEE 319 (535)
Q Consensus 253 ~~g~~~~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 319 (535)
++++.+++.+. +..|||+.|++.++..++..+..+++||+++....+.+.++.....++. .....++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (479)
T PRK10077 170 LVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQE 249 (479)
T ss_pred HHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHH
Confidence 99988876553 3569999999988887776666667776543211111111100000000 0000000
Q ss_pred hccCCC--CCcHHHhhhcHHHHH---HHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHH
Q 009409 320 MGESLK--DVPWKAIFRSKAVWA---MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ 394 (535)
Q Consensus 320 ~~~~~~--~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~ 394 (535)
..+..+ ....+..+.-..... .....+....+.+...++.|.+.+ ..|++....++.....++..+++.++.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~g~ 328 (479)
T PRK10077 250 IKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFK-TLGASTDIALLQTIIVGVINLTFTVLAIM 328 (479)
T ss_pred HHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHH-HcCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 000000000000000 111112222233445567787775 57888877777777888899999999999
Q ss_pred HHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhh-h-cCC-CcHHHHHHHHHHHHHHhh-hhhhhhhhhhhccCCcchh
Q 009409 395 FADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS-I-DLG-LPHWEIVGILTAGLALSS-FALSGLYCTHQDISPEYAS 470 (535)
Q Consensus 395 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g 470 (535)
++||+++| .....+.+..+++..+.. . ... ...+.....++.+.+.+. ..+.......+.+|+++|+
T Consensus 329 l~dr~g~r---------~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 399 (479)
T PRK10077 329 TVDKFGRK---------PLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRG 399 (479)
T ss_pred HHHHhcCh---------HHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHH
Confidence 99999864 222333333333332221 1 111 122233333334433332 2234455666778889999
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHh------cccCcchHHHHHHHHHHHHHHHhhhhhccCCCCC
Q 009409 471 ILLGITNTVGAVPGIVGVALTGYLL------DSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQ 529 (535)
Q Consensus 471 ~~~g~~~~~~~lg~~igp~i~G~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (535)
++.|+.+..+.+|.++++.+.+.+. +..+ +...|++.++..+++.++.+...+++|++
T Consensus 400 ~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 463 (479)
T PRK10077 400 KALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCMGVLAALFMWKFVPETKGK 463 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 9999999999999999977776544 4554 55666666665566656555555555544
No 52
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=4.6e-30 Score=257.65 Aligned_cols=352 Identities=16% Similarity=0.144 Sum_probs=266.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
++.+..+.+..+...+....+.+.+|.+.+++|.|..+.+++.+++.+++.++++++|+++||+|||+++.++.++..++
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 86 (394)
T PRK11652 7 VNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILG 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 45555666666677788888889999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHH
Q 009409 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (535)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f 272 (535)
.++.. ..++++.+++.|++.|++.+...+....+..|.++++++++++++...+..++..++|.+++.+.+..|||+.|
T Consensus 87 ~~~~~-~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f 165 (394)
T PRK11652 87 TLVAL-FAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACY 165 (394)
T ss_pred HHHHH-HHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHH
Confidence 87764 56778999999999999998888888888999999899999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHH-HhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhh
Q 009409 273 YIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (535)
Q Consensus 273 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (535)
++.+++.++..+ ..++.+|+++.+++ +.+ ....++..+++|.++...+..+.....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (394)
T PRK11652 166 LFLLLLGAGVTFSMARWMPETRPADAR----RTR-------------------VLASYRTLLSNRRFNCYLLMLIGTLAG 222 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCccCccccc----hhH-------------------HHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 998877655433 33444543321110 000 011245677888888766666666666
Q ss_pred hHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhh-
Q 009409 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI- 430 (535)
Q Consensus 352 ~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 430 (535)
...+..+.|.++++.+|++..+.+++.....++.+++..+.+++.||.++. ............+.......
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 294 (394)
T PRK11652 223 IAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL--------MWQSVICCLLAGLLMWIPGWF 294 (394)
T ss_pred HHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHh
Confidence 666677888899888999999999988888888888889999999988632 12211222222222222111
Q ss_pred cCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcc
Q 009409 431 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 497 (535)
Q Consensus 431 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~ 497 (535)
...+........++.+++.+...+.......+.. |+++|++.++.+....+|+.+++.++|.+.+.
T Consensus 295 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 295 GVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPF-PYLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 1122333444455566666665666665555544 57889999999999999999999999988765
No 53
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=9.2e-31 Score=261.58 Aligned_cols=377 Identities=13% Similarity=0.043 Sum_probs=268.7
Q ss_pred HHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (535)
.+.+..++..++...+....+.+.+++|.+..+.+++.+.+.+++.++.+++|+++||+|||++++++.++++++.+++.
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 45666777777666677777777899999999999999999999999999999999999999999999999888876653
Q ss_pred hhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHH
Q 009409 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (535)
Q Consensus 198 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 277 (535)
+..+ .++.|+++|++.+...|...+++.|++|+++|++++++......+|.++||.++|++.+. .|+..+++.+.
T Consensus 87 -~~~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~ 161 (393)
T PRK11195 87 -FGIH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCAL 161 (393)
T ss_pred -HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3444 278899999999999999999999999999999999999999999999999999999875 48888877766
Q ss_pred HHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHH
Q 009409 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (535)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (535)
..++..+....+|++++++++...+.... .+ +. ...++.++++|.+....+..++..........
T Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~-------~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (393)
T PRK11195 162 IYLLAALFNLFIPRLGARRPGQSWNPIAL---LR-------DF-----FHACRVLWRDKLGRFSLAGTTLFWGAGATLRF 226 (393)
T ss_pred HHHHHHHHHhcCCCCcccccccCCCHHHH---HH-------HH-----HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHH
Confidence 55544455555665432211111110000 00 00 00135677888776665555555555566677
Q ss_pred hhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHH
Q 009409 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHW 437 (535)
Q Consensus 358 ~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (535)
.+|.|+++.+|.++.+.|++.....++.+++.++.+++.||.+.+ + ....+.+. +........ .++.++
T Consensus 227 ~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-------~--~~~~g~~~-~~~~~~~~~-~~~~~~ 295 (393)
T PRK11195 227 LVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL-------R--VLPAGILM-GLVVLLMAL-QHSLLP 295 (393)
T ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-------c--hHHHHHHH-HHHHHHHHH-HhHHHH
Confidence 788899888999999999999999999999999999998876543 1 11222222 222222222 222333
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhccCCcc-hhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Q 009409 438 EIVGILTAGLALSSFALSGLYCTHQDISPEY-ASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTG 516 (535)
Q Consensus 438 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~ 516 (535)
..+..++.|++.+...++.....++..+++. +|++.|+.++.++++..++..+.+.+ +..| ....+.+.++..++..
T Consensus 296 ~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~ 373 (393)
T PRK11195 296 AYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLVAL 373 (393)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHHHH
Confidence 3445556677766666555555555433443 69999999999999999999999966 4554 6666666555555555
Q ss_pred HhhhhhccCCC
Q 009409 517 TIVWLAFASSK 527 (535)
Q Consensus 517 ~~~~~~~~~~~ 527 (535)
.+.+.++.+++
T Consensus 374 ~~~~~~~~~~~ 384 (393)
T PRK11195 374 AMALLWRWHRR 384 (393)
T ss_pred HHHHHHHHHHh
Confidence 54444443333
No 54
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=9.6e-31 Score=262.08 Aligned_cols=364 Identities=15% Similarity=0.111 Sum_probs=262.1
Q ss_pred HHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHh
Q 009409 120 SLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (535)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (535)
....++...+.....+.++. +.+++|.|..+.|++.+...++..+.++++|+++||+|||+++..+.++.+++.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~- 94 (400)
T PRK11646 16 LIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMA- 94 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHH-
Confidence 34555566666666777665 6789999999999999999999999999999999999999999999999988887764
Q ss_pred hhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHH
Q 009409 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (535)
Q Consensus 199 ~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~ 278 (535)
..++++.+++.|++.|++.+...+...+++.+++|+++|++++++......+|..+||.+++++. ..|||+.|++.++.
T Consensus 95 ~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~ 173 (400)
T PRK11646 95 IAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVL 173 (400)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 56778889999999999998888999999999999999999999999999999999999999998 67999999998877
Q ss_pred HHHHHHH-hhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHH
Q 009409 279 GIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (535)
Q Consensus 279 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (535)
.++..+. .+..|+.+++ + .+++ ....+++++++|.++...+..+...........
T Consensus 174 ~~~~~i~~~~~~~~~~~~-~----~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (400)
T PRK11646 174 FVLAAAFNAWLLPAYKLS-T----VRTP-------------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVML 229 (400)
T ss_pred HHHHHHHHHHhCCccccc-c----cchh-------------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 6654433 3333332110 0 0000 011246778888887666555554444445567
Q ss_pred hhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHH-HHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcH
Q 009409 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH 436 (535)
Q Consensus 358 ~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (535)
++|.|+++. +.++.+.+.+.+...++..++....+++.|| ++.+ +. ...+....++...+.... ++..
T Consensus 230 ~~p~~~~~~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~--------~~-~~~~~~~~~~~~~~l~~~-~~~~ 298 (400)
T PRK11646 230 MLPIMVNDI-AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE--------HR-LMAGLLIMSLSMFPIGMV-SNLQ 298 (400)
T ss_pred hhhhhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh--------HH-HHHHHHHHHHHHHHHHHh-hhHH
Confidence 899999875 4477888888887777777666666666665 3221 11 222333333333333222 2233
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCc---chHHHHHHHHHHH
Q 009409 437 WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS---WSMSLFAPSIFFY 513 (535)
Q Consensus 437 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~---~~~~~~~~~~~~~ 513 (535)
+..+..++.+.+.+...+.......+..|++++|++.|+.+...++|..+||.++|.+.|..++ ....+...+++.+
T Consensus 299 ~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~ 378 (400)
T PRK11646 299 QLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGL 378 (400)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHH
Confidence 3334444555555555566667777778999999999999999999999999999999998642 3445555444444
Q ss_pred HHHHhhh
Q 009409 514 LTGTIVW 520 (535)
Q Consensus 514 ~~~~~~~ 520 (535)
+..+...
T Consensus 379 ~~~~~~~ 385 (400)
T PRK11646 379 ITLLALY 385 (400)
T ss_pred HHHHHHH
Confidence 4444433
No 55
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=2.2e-30 Score=258.46 Aligned_cols=361 Identities=10% Similarity=-0.039 Sum_probs=273.8
Q ss_pred HHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHH-HHHHHHHHH
Q 009409 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLI-WSLATALLP 197 (535)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~-~~~~~~~~~ 197 (535)
+.+.++..++....+.|++|.+.+++|+|..++|++.+++.+...++++++|+++||+||+........+ ..+..+...
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 5566777778888999999999999999999999999999999999999999999999985433222211 112222232
Q ss_pred hhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHH
Q 009409 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (535)
Q Consensus 198 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 277 (535)
..+++++.+++.|+++|.+.+...|...++..++ +++|++.+|......++|.+++|++++.+.+++|||+.|++.++
T Consensus 89 ~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~ 166 (382)
T TIGR00902 89 AGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTA 166 (382)
T ss_pred HhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 3567788999999999999988889988887654 47889999999999999999999999999999999999998766
Q ss_pred HHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHH
Q 009409 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (535)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (535)
..++.++ ...++++.+++++.. +++ ......+++++|+|++|.+.+..++...+......
T Consensus 167 ~~~~~~~-~~~~~~~~~~~~~~~-~~~------------------~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~ 226 (382)
T TIGR00902 167 GLAFMLI-GFLIKPTIPPKDAIP-EDE------------------SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYG 226 (382)
T ss_pred HHHHHHH-HHHcCCCCCCCcccc-ccc------------------cccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 5333333 233333211111100 000 00112356888999999999988998888889999
Q ss_pred hhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHH
Q 009409 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHW 437 (535)
Q Consensus 358 ~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (535)
+.|.|+++ +|.+..+.|.+.....++.+++..+.+++.||++.+ ....++.+...+...+... .++.+.
T Consensus 227 ~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~---------~~l~~~~~~~~~~~~~~~~-~~~~~~ 295 (382)
T TIGR00902 227 FSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR---------DLLLISAIACVGRWAIIGA-IEAFPL 295 (382)
T ss_pred HHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH---------HHHHHHHHHHHHHHHHHHh-HhhHHH
Confidence 99999976 799999999999999999999999999999999754 3334455555544444433 344455
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHH-hhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Q 009409 438 EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNT-VGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 515 (535)
Q Consensus 438 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~ 515 (535)
.+...++.++..+...+....++.+. |+++++++.++++. ...+|.+++|.++|+++|+.| + ..|...+++.+++
T Consensus 296 ~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~~~~~ 371 (382)
T TIGR00902 296 IFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAIIAAAA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHH
Confidence 66677888888888888888888876 88899999999874 567999999999999999985 4 5566656544433
No 56
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=5.7e-30 Score=262.36 Aligned_cols=376 Identities=13% Similarity=0.117 Sum_probs=268.2
Q ss_pred HHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhccc-----CCchh-hHHHHHHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-----GGRKV-LQTGVLIWSL 191 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----g~r~~-~~~~~~~~~~ 191 (535)
.+++.++.+++.....+..+|.+.++.|.+..++|.. +.....+ ++.+++|+++||+ |||+. +..+.++.++
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~ 93 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH
Confidence 3455556777888888889999999999999999986 4444444 6889999999999 99885 6577666666
Q ss_pred HHHHHHhhh--hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcc-ccch
Q 009409 192 ATALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGW 268 (535)
Q Consensus 192 ~~~~~~~~~--~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw 268 (535)
+...+++.. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++++.+ ..||
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GW 173 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGW 173 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCH
Confidence 665554432 4567888899999999999999999999999999999999999999999999999999999998 5799
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHH
Q 009409 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (535)
Q Consensus 269 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (535)
|..|++.+++.++..+..++.+|+++..+. ++ .. ++ ....++++.++++..|...+..++.
T Consensus 174 r~~f~i~a~l~ll~~l~~~~~~e~~~~~~~---~~-~~---~~------------~~~~~l~~~~~~~~~~~~ll~~~l~ 234 (491)
T PRK11010 174 QGMYWLMAALLIPCIIATLLAPEPTDTIPV---PK-TL---EQ------------AVVAPLRDFFGRNNAWLILLLIVLY 234 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccccc---cc-ch---hh------------hHHHHHHHHHcCcCHHHHHHHHHHH
Confidence 999999998877666655555554321100 00 00 00 0011356677777777776666666
Q ss_pred hhhhHHHHHhhHHHHHHHhCCChhhHHHHH-hhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHH--HHH
Q 009409 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVS-ILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA--VCM 425 (535)
Q Consensus 349 ~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~-~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 425 (535)
....+....+.+.|+.+.+|++..+.+.+. ....++.+++.++.|+++||++++ +.....+.+... ..+
T Consensus 235 ~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~--------~~l~i~~~l~~l~~l~~ 306 (491)
T PRK11010 235 KLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF--------RALMIFGILQGVSNAGY 306 (491)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--------HHHHHHHHHHHHHHHHH
Confidence 666667778888898777899999999887 455678999999999999999864 222222221111 111
Q ss_pred HHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHH
Q 009409 426 TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSL 505 (535)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~ 505 (535)
.......++........++..+..+...........+..+++..++..|+.+...++|..+++.+.|++.|..| |...|
T Consensus 307 ~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f 385 (491)
T PRK11010 307 WLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFY 385 (491)
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHH
Confidence 11122112222222223332222232233334455566788889999999999999999999999999999885 88888
Q ss_pred HHHHHHHHHHHHhhhhhc
Q 009409 506 FAPSIFFYLTGTIVWLAF 523 (535)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~ 523 (535)
.+.+++.+.+.++.+..+
T Consensus 386 ~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 386 LFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 887776666655555443
No 57
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.4e-30 Score=262.03 Aligned_cols=371 Identities=24% Similarity=0.291 Sum_probs=270.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
+++.+....+.++...++....++..|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++..+.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 94 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHH
Confidence 45566666677777778888888999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHH
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (535)
+.++.. ..++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++++.+..||++.
T Consensus 95 ~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~ 173 (398)
T TIGR00895 95 FTLLCA-LATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSL 173 (398)
T ss_pred HHHHHH-HccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceee
Confidence 887764 5677788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-HHHhhhcccCCCCCCCCCCcchhhhhhh--hhhhhh----HHHhcc--CCCCCcHHHhhhc---HHHH
Q 009409 272 FYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMK--KSLSAS----LEEMGE--SLKDVPWKAIFRS---KAVW 339 (535)
Q Consensus 272 f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~--~~~~~~~~~~~~~---~~~~ 339 (535)
|++.+++.++. .+...+++++++....+..++......+ .....+ ..+.++ ...+..++.++++ +..+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (398)
T TIGR00895 174 FYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITV 253 (398)
T ss_pred hhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHH
Confidence 99987555443 3444455554322111110000000000 000000 000000 0001112223322 3344
Q ss_pred HHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 009409 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (535)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 419 (535)
.+.+..++.....+....++|.+. +.+|++..+.+.+.....++.+++.++.+++.||++++ ........
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~ 323 (398)
T TIGR00895 254 LLWLLYFMLLVGVYFLTNWLPKLM-VELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR---------VTALLLLL 323 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH---------HHHHHHHH
Confidence 445555566667777788899555 56799999999999999999999999999999999753 11122222
Q ss_pred HHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHH
Q 009409 420 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL 494 (535)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l 494 (535)
.......+.. ...+.....+..++.+++.+...+.......+.+|+++|+++.|+.+.+..+|..+||.++|++
T Consensus 324 ~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 324 GAVFAVLVGS-TLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 2222222222 1233444555566677777777777777788888999999999999999999999999999976
No 58
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=1.2e-30 Score=260.96 Aligned_cols=380 Identities=10% Similarity=0.045 Sum_probs=270.8
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHH
Q 009409 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (535)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (535)
+..+.+..++...+.....+.+|. +.+++|+|..+.|++.+++.+++.+++++.|+++||+|||++++++.++.+++.+
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~ 88 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFI 88 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Confidence 334555666677787888887766 5678999999999999999999999999999999999999999999988888777
Q ss_pred HHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHH
Q 009409 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (535)
Q Consensus 195 ~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~ 274 (535)
+.. +.++++.++++|++.|.+.+...+...++..|.+++++|++++++.....++|.++||++++++.+ .+|+..|++
T Consensus 89 ~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~ 166 (395)
T PRK10054 89 AIP-LVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWL 166 (395)
T ss_pred HHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHH
Confidence 664 567778888889888888777788889999999999999999999999999999999999999875 699999999
Q ss_pred HHHHHHHHHHHh-hhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhH
Q 009409 275 FGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (535)
Q Consensus 275 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (535)
.+++.++..+.. +.+++++++++++ ++ + ....++.+++|.++...+..++......
T Consensus 167 ~~~~~~i~~i~~~~~~~~~~~~~~~~---~~------~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 223 (395)
T PRK10054 167 AAICSAFPLVFIQIWVQRSEKAIATE---TG------S--------------VWSPSVLLQDKALLWFTCSGFLASFVSG 223 (395)
T ss_pred HHHHHHHHHHHHHHHHhccccccccc---hh------h--------------hhhhhhhccCceehHHHHHHHHHHHHHH
Confidence 887776654333 3344443221100 00 0 0012467788998888877777777766
Q ss_pred HHHHhhHHHHHHH--hCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhc
Q 009409 354 TCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 431 (535)
Q Consensus 354 ~~~~~~p~~l~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (535)
....+.+.|+... .+.+....+.+.....+.........+++.||.++| .....+.....+.+......
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~---------~~l~~~~~~~~~~~~~~~~~ 294 (395)
T PRK10054 224 AFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR---------PLMTAGTLCFVIGLVGFIFS 294 (395)
T ss_pred HhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch---------hHHHHHHHHHHHHHHHHHHc
Confidence 6666777777543 345566667777777777777777888899987654 22223333333333222222
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHH
Q 009409 432 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 511 (535)
Q Consensus 432 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~ 511 (535)
.++.+...+...+.+++.....+.....+.+..|++.++++.|..+ ...+|..+||.++|.++|+.| +...|.+.+++
T Consensus 295 ~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~ 372 (395)
T PRK10054 295 GNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP-PWSLFVILALA 372 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC-hhhHHHHHHHH
Confidence 2222223344555666655555555556667788899999998765 567899999999999999985 66666554443
Q ss_pred HHHHHHhhhhhccCCCCCCCCCC
Q 009409 512 FYLTGTIVWLAFASSKPQNFSTR 534 (535)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~ 534 (535)
.. +..++..++.+.++|.++
T Consensus 373 ~~---~~~~~~~~~~~~~~~~~~ 392 (395)
T PRK10054 373 IV---AAWLLMLKGMRARPWGQP 392 (395)
T ss_pred HH---HHHHHHHhccccCcccCC
Confidence 32 222333355566677664
No 59
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=1.1e-29 Score=254.78 Aligned_cols=348 Identities=15% Similarity=0.123 Sum_probs=247.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
|.+....+..++...+...+.+++|.+.+++|.|..+.++..+.+.++..+++++.|+++||+|||++++.+.++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIAS 82 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHH
Confidence 44445556666777777888899999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHH
Q 009409 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (535)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 273 (535)
.+.. .+++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..|||+.|+
T Consensus 83 ~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~ 161 (392)
T PRK10473 83 LLCS-LAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFY 161 (392)
T ss_pred HHHH-HhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHH
Confidence 7764 567778889999999999999899999999999999999999999999999999999999999888899999999
Q ss_pred HHHHHHHHHHHH-hhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhh
Q 009409 274 IFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (535)
Q Consensus 274 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (535)
+.+++.++..+. ...++|+++++.+ ++.. . ....++.++++.++...+...+.....
T Consensus 162 ~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~---~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (392)
T PRK10473 162 TMAAMGILVLLLSLFILKETRPARAP---AASS---K----------------PRENSESLLNRFFLSRLVITTLSVTVI 219 (392)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcccC---Cccc---h----------------HHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 988877655443 3444544322110 0000 0 001245677887776655555555555
Q ss_pred HHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcC
Q 009409 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL 432 (535)
Q Consensus 353 ~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (535)
..+..+.|.++++.+|+++.+.+.+.+...++.+++.++.+++.||+++| + ....+.....+.........
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~-------~--~~~~~~~~~~~~~~~~~~~~ 290 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR-------T--LMLTSQVLFLAAGITLALSP 290 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-------H--HHHHHHHHHHHHHHHHHHHH
Confidence 56677788888888899999999999999999999999999999999865 2 22222222222222222211
Q ss_pred CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccC
Q 009409 433 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH 499 (535)
Q Consensus 433 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 499 (535)
. .........+.+.+.+...... ......+.++++ |..+....++..+++.++|.+.+..|
T Consensus 291 ~-~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 291 S-HAVSLFGITLICAGFSVGFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG 351 (392)
T ss_pred H-HHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 1222222223233322222211 112222333332 33344455677777888888887765
No 60
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=8e-30 Score=255.36 Aligned_cols=366 Identities=15% Similarity=0.151 Sum_probs=274.9
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHH
Q 009409 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (535)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (535)
+.++++.++..++..+..++.+|.+++++|+|..+.|++.+.+.+++.++.++.|++.||+|||+++.++.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 45666777788888888899999999999999999999999999999999999999999999999999999999988877
Q ss_pred HHhh--hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc--------
Q 009409 196 LPLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------- 265 (535)
Q Consensus 196 ~~~~--~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------- 265 (535)
.... .++++.+++.|++.|+|.+...+....++.+..|+++|++.+++.+...++|..+||.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 5322 356789999999999999999999999999999999999999999999999999999999877422
Q ss_pred ------------------cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCC
Q 009409 266 ------------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDV 327 (535)
Q Consensus 266 ------------------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (535)
.+||++|++.+++.++..+...+.+.++.++.+ .+++ ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~--~~~~-------------------~~~~ 223 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSD--AKQI-------------------SFSA 223 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc--cccc-------------------cchh
Confidence 369999999988776654444333322211100 0000 0011
Q ss_pred cHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHh-CCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 009409 328 PWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL-SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (535)
Q Consensus 328 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 406 (535)
..++++|+|+++...+..+++.....+..++++.|.++.. +.+...++...+....+..+|+++.+++.||+++|
T Consensus 224 ~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~---- 299 (410)
T TIGR00885 224 SLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH---- 299 (410)
T ss_pred hHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH----
Confidence 2357788999998888888888888888899999996532 44445555566667778899999999999999764
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhH
Q 009409 407 TMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIV 486 (535)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i 486 (535)
+. ..+..+...++.++..... .......+.+.+++.+..++.......+..+++....+.++...+ +|+.+
T Consensus 300 ----~~-l~i~~~~~~~~~ll~~~~~--~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~ 370 (410)
T TIGR00885 300 ----KV-LMAYAIIGMALCLGSIFAG--GHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGI 370 (410)
T ss_pred ----HH-HHHHHHHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccch
Confidence 22 2233333333333333322 233455566677787777887777777777766655555555544 99999
Q ss_pred HHHHHHHHhccc-----CcchHHHHHHHHHHHHH
Q 009409 487 GVALTGYLLDST-----HSWSMSLFAPSIFFYLT 515 (535)
Q Consensus 487 gp~i~G~l~~~~-----g~~~~~~~~~~~~~~~~ 515 (535)
+|++.|.+.|.. |++...|++...+.+..
T Consensus 371 ~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 371 VPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred HHHHHHHHHHHhcccccCccchHHHHHHHHHHHH
Confidence 999999999954 45777887766555443
No 61
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=8.9e-30 Score=251.40 Aligned_cols=346 Identities=30% Similarity=0.450 Sum_probs=291.6
Q ss_pred HHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (535)
.+.+..+...++.....+..|.+.+++|.+..+.+++.+...++..++++++|+++||+|||+.+..+.++..++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 44566777888888999999999999999999999999999999999999999999999999999999999988887775
Q ss_pred hhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHH
Q 009409 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (535)
Q Consensus 198 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 277 (535)
..++++.+++.|++.|++.+...+...+++.|++|+++|++.+++......+|..++|.+++.+.+..+||+.|++.++
T Consensus 83 -~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (352)
T cd06174 83 -FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAI 161 (352)
T ss_pred -HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 5577899999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHH
Q 009409 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (535)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (535)
+.++..+...+++ |.++...+..++..........
T Consensus 162 ~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 196 (352)
T cd06174 162 LGLLLALLLLFLL---------------------------------------------RLLLLLALAFFLLSFGYYGLLT 196 (352)
T ss_pred HHHHHHHHHHHHH---------------------------------------------HHHHHHHHHHHHHHhHHHHHHH
Confidence 8776655554433 4566677777888888889999
Q ss_pred hhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHH
Q 009409 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHW 437 (535)
Q Consensus 358 ~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (535)
+.|.+.++.+|.+..+.+.......++..++.++.+++.||+++| ++ ....+.....+....... .++...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~i~~~~~~~-~~~~~~ 267 (352)
T cd06174 197 YLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-------RL-LLLIGLLLAALGLLLLAL-APSLAL 267 (352)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------hH-HHHHHHHHHHHHHHHHHH-hccHHH
Confidence 999999887799999999999999999999999999999999865 10 233334333333333333 223445
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Q 009409 438 EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT 517 (535)
Q Consensus 438 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~ 517 (535)
..+..++.+++.+...+.......+..|+++|++..|+.+...++|..++|.+.|.+.+.. ++...+.+.+++.++..+
T Consensus 268 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~-~~~~~~~~~~~~~~i~~i 346 (352)
T cd06174 268 LLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG-GYGGVFLILAALALLAAL 346 (352)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcchHHHHHHHHHHHHHH
Confidence 5566677788877777777888888888899999999999999999999999999999876 588888887776666555
Q ss_pred hh
Q 009409 518 IV 519 (535)
Q Consensus 518 ~~ 519 (535)
+.
T Consensus 347 ~~ 348 (352)
T cd06174 347 LL 348 (352)
T ss_pred Hh
Confidence 44
No 62
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=9.9e-30 Score=253.90 Aligned_cols=334 Identities=20% Similarity=0.276 Sum_probs=245.9
Q ss_pred hhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHH
Q 009409 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (535)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (535)
++...+.+.+|.+.+++|+|..+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++..+.. ..++++.++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ 83 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACA-LAQTIDQLI 83 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHH-HHccHHHHH
Confidence 4556778999999999999999999999999999999999999999999999999999999888887775 567778999
Q ss_pred HHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHH-h
Q 009409 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-F 286 (535)
Q Consensus 208 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~-~ 286 (535)
+.|++.|++.+...+...+++.|++++++|++++++......+|..++|.+++.+.+..+||+.|++.+++.++..+. .
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999899999999988877665443 3
Q ss_pred hhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHH
Q 009409 287 KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE 366 (535)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~ 366 (535)
+.+++++++++++. .+. ++ ...++++.+++|.++...+..++...+.+....+.|.++.+.
T Consensus 164 ~~~~~~~~~~~~~~-~~~-----~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (377)
T PRK11102 164 FFIPETLPKERRQP-FHL-----RT-------------TIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIEL 224 (377)
T ss_pred HhCCccCcccccCC-CCh-----HH-------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 44454332211100 000 00 001245678888888877777777777777888889888888
Q ss_pred hCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHH---HHHHHHHhhhcCCCcHH-HHHHH
Q 009409 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS---PAVCMTLSSIDLGLPHW-EIVGI 442 (535)
Q Consensus 367 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~ 442 (535)
+|+++.+.+.+.....++.+++.++.+++.||+++| + . ...+... ..+.+..... .+...+ ..+..
T Consensus 225 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-------~-~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 294 (377)
T PRK11102 225 NGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL-------N-M-LRFGLWIQFIMGIWLVVSAL-LDLGFWALVVGV 294 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-------H-H-HHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHH
Confidence 899999999999999999999999999999999865 1 1 1222211 1111111111 111222 22222
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhh-hhhhhHHHHHHH
Q 009409 443 LTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVG-AVPGIVGVALTG 492 (535)
Q Consensus 443 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~lg~~igp~i~G 492 (535)
...+.+.+...........+ ..|+.++++.++.+... .+|..+++.+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 295 AAFVGCVSMISSNAMAVILD-EFPHMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHhhHHHHHHHhc-cccccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22333333333333333333 45688999999987765 456666665544
No 63
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3.3e-30 Score=266.30 Aligned_cols=409 Identities=17% Similarity=0.157 Sum_probs=268.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhccc-----CCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRF-----GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGV 186 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 186 (535)
+++.+.++.+..+..+++...++...|.+.+++ +.+..+.+++.+.+.+++.++.+++|+++||+|||+++.++.
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 446667778888899999999999888876642 345667789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhh------hhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHH
Q 009409 187 LIWSLATALLPLLAGF------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~~------~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 260 (535)
+++.++.++.+ .+.+ ++.++++|++.|++.+...+....+++|++|+++|++++++......+|.++++.++.
T Consensus 94 ~~~~v~~~~~~-~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 94 IIMIIATVASG-LSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHH-HccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888887765 3333 5789999999999999999999999999999999999999999999999999998887
Q ss_pred Hhcc-----------------------ccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCc-chhh--hhhh-h-h
Q 009409 261 PIIE-----------------------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAP-RSNY--INMK-K-S 312 (535)
Q Consensus 261 ~l~~-----------------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~-~-~ 312 (535)
.+.. ..+||+.|.+.++..++.++..+++||+++....+.++ ++.. ..+. + .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~ 252 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVK 252 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccc
Confidence 6532 23799999888887777777778888887642111111 1111 0000 0 0
Q ss_pred hhhhHHH---h--ccCCCCCcHHHhhhc---HHHHH----HHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHH----
Q 009409 313 LSASLEE---M--GESLKDVPWKAIFRS---KAVWA----MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW---- 376 (535)
Q Consensus 313 ~~~~~~~---~--~~~~~~~~~~~~~~~---~~~~~----~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~---- 376 (535)
..++.++ . +++..+.++++++++ ++.+. ..+..++....+|+...+.|.+++ ..|++....+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~ 331 (502)
T TIGR00887 253 IEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYE 331 (502)
T ss_pred cccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHH
Confidence 0000000 0 001111346666653 22211 222334445566777788999996 46886543221
Q ss_pred --------HHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcC---CCcHHHHHHHHHH
Q 009409 377 --------VSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL---GLPHWEIVGILTA 445 (535)
Q Consensus 377 --------~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 445 (535)
......++.+++.++.++++||+|+| .....+..+.++++.+..... ..........+..
T Consensus 332 ~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR---------~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 402 (502)
T TIGR00887 332 ELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK---------PIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQ 402 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch---------hHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 22334456677889999999999875 222223322222222221111 1111111111111
Q ss_pred HHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccC---------cchHHHHHHHHHHHHHH
Q 009409 446 GLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH---------SWSMSLFAPSIFFYLTG 516 (535)
Q Consensus 446 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g---------~~~~~~~~~~~~~~~~~ 516 (535)
.++.....+....+..+.+|++.|+++.|+.+.++.+|++++|.+.|++.+..+ ++...|++.+++.+++.
T Consensus 403 ~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 482 (502)
T TIGR00887 403 FFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGI 482 (502)
T ss_pred HHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHH
Confidence 111111222333345667888999999999999999999999999999998531 23445666666555554
Q ss_pred HhhhhhccCCCCCCCC
Q 009409 517 TIVWLAFASSKPQNFS 532 (535)
Q Consensus 517 ~~~~~~~~~~~~~~~~ 532 (535)
+.. ++.+++|.++.+
T Consensus 483 i~~-~~lpEt~~~~le 497 (502)
T TIGR00887 483 LFT-LLIPETKGKSLE 497 (502)
T ss_pred HHh-eEeccCCCCCHH
Confidence 443 444666655544
No 64
>TIGR00898 2A0119 cation transport protein.
Probab=99.98 E-value=7.2e-30 Score=264.82 Aligned_cols=377 Identities=17% Similarity=0.122 Sum_probs=259.2
Q ss_pred hhhhhhhcccCCC---ccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 009409 135 VAIIPMSHRFGWN---SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (535)
Q Consensus 135 ~~~~~~~~~~g~s---~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 211 (535)
+..|.+.+|+|++ ..+.+++.+++.++..++.+++|+++||+|||++++++.++.+++.++.+ ++++++.+++.|+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~r~ 188 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTA-FSPNYTVFLVFRL 188 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH-HcccHHHHHHHHH
Confidence 5678899999999 89999999999999999999999999999999999999999888887764 6788899999999
Q ss_pred HhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhccc
Q 009409 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (535)
Q Consensus 212 ~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 291 (535)
+.|++.+...+...+++.|++|+++|+++.++...+..+|.+++|.+++.+.+ ||+.|++.++..++..+..+++||
T Consensus 189 l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 189 LVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred HHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999877653 999999999888777766677777
Q ss_pred CCCCCCCCCCcchhhhhhhhh------------hhhh-HHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHh
Q 009409 292 GETSNGATLAPRSNYINMKKS------------LSAS-LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 358 (535)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 358 (535)
+++....+.+.++.....++. .... .++.++..++..+++++++|.++...+..++..+......+.
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYG 345 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 654221111111100000000 0000 000011112346788999998887766555444433333333
Q ss_pred hHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCc-HH
Q 009409 359 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP-HW 437 (535)
Q Consensus 359 ~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 437 (535)
++.++ +.++.+... .....++..+++.++.+++.||+|+| .......++.++++++........ .+
T Consensus 346 ~~~~~-~~~~~~~~~---~~~~~~~~~i~~~~~~~~l~dr~grr---------~~~~~~~~~~~~~~l~~~~~~~~~~~~ 412 (505)
T TIGR00898 346 LVLDL-GNLGGNIYL---DLFISGLVELPAKLITLLLIDRLGRR---------YTMAASLLLAGVALLLLLFVPVDLYFL 412 (505)
T ss_pred Hhccc-cccCCChHH---HHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHcCCCchHH
Confidence 33333 334555433 33455677888999999999999854 233333444444433333323222 33
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Q 009409 438 EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT 517 (535)
Q Consensus 438 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~ 517 (535)
.....++.+++..........+..+.+|++.|+++.|+.+++..+|++++|.+.+ +.+ .+ +...+.+.+++.+++++
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~-~~~~~~~~~~~~~~~~~ 489 (505)
T TIGR00898 413 RTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KW-LFLPLVLFGGLALLAGI 489 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HH-HhhHHHHHHHHHHHHHH
Confidence 3333334444444444555556677788999999999999999999999999999 544 32 44555555555555544
Q ss_pred hhhhhccCCCCCCCC
Q 009409 518 IVWLAFASSKPQNFS 532 (535)
Q Consensus 518 ~~~~~~~~~~~~~~~ 532 (535)
+.+ ..+++++++.+
T Consensus 490 ~~~-~lpet~~~~l~ 503 (505)
T TIGR00898 490 LTL-FLPETKGVPLP 503 (505)
T ss_pred HHH-cCcCCCCCCCC
Confidence 444 33455554443
No 65
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.98 E-value=3.8e-30 Score=254.51 Aligned_cols=338 Identities=17% Similarity=0.203 Sum_probs=253.4
Q ss_pred hhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHH
Q 009409 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (535)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (535)
.....+++.+|.+.+++|+|.++.+++.+++.+++.++.++.|+++||+|||+++.++.++.+++.++. ..++++.++
T Consensus 14 ~~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~l~ 91 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR--SAPGTALLF 91 (355)
T ss_pred CccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH--HhccHHHHH
Confidence 334567889999999999999999999999999999999999999999999999999988877776554 456678889
Q ss_pred HHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc--chhHHHHHHHHHHHHHHHH
Q 009409 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--GWESVFYIFGLLGIAWFSG 285 (535)
Q Consensus 208 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--gw~~~f~~~~~~~~~~~~~ 285 (535)
+.|++.|++.+...+....++.++++ ++|++++++.+.+..+|..+++.+++.+.+.. +||+.|.+.++..++...
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~- 169 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL- 169 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH-
Confidence 99999999998887788888889886 68999999999999999999999999888764 399999887765443322
Q ss_pred hhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHH
Q 009409 286 FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE 365 (535)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~ 365 (535)
..+++.+++++++.. ......++.+|+|.++...+..++....++....++|.|+++
T Consensus 170 -~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~ 226 (355)
T TIGR00896 170 -AWIPQVRRRVAANQT----------------------TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS 226 (355)
T ss_pred -HHhhhhccccCCCCC----------------------CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223332211110000 001123567788988887777777777888889999999976
Q ss_pred HhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHH
Q 009409 366 ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTA 445 (535)
Q Consensus 366 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (535)
+|++..+.+.+.+...++.++++++.|++.||++.+ + .......+..+++............+ ...++.
T Consensus 227 -~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 295 (355)
T TIGR00896 227 -HGASAATAGSLLALMQLAQAASALLIPALARRVKDQ-------R-GIVAVLAVLQLVGLCGLLFAPMHGLW--AWALVL 295 (355)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc-------h-HHHHHHHHHHHHHHHHHHHhhhhHHH--HHHHHH
Confidence 699999999999999999999999999999999654 2 22222223333232222222222222 234456
Q ss_pred HHHHhhhhhhhhhhhhhcc-CCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchH
Q 009409 446 GLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM 503 (535)
Q Consensus 446 g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~ 503 (535)
|++.+...+.......+.. ++++++...|+.+..++++..++|.+.|++.|+.|+|..
T Consensus 296 g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~~ 354 (355)
T TIGR00896 296 GLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWLM 354 (355)
T ss_pred HHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 6666655555444444433 456789999999999999999999999999999987753
No 66
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=1.2e-28 Score=246.03 Aligned_cols=353 Identities=12% Similarity=0.036 Sum_probs=257.6
Q ss_pred HHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCc----hhhHHHHHHHHHHHHHHH
Q 009409 122 AFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR----KVLQTGVLIWSLATALLP 197 (535)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r----~~~~~~~~~~~~~~~~~~ 197 (535)
.++..+.+...+.+.+|.+.+++|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. .....
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~---~~~~~ 88 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF---AVAFW 88 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH---HHHHH
Confidence 3555567778899999999999999999999999999999999999999999999994 3333222221 22223
Q ss_pred hhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHH
Q 009409 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (535)
Q Consensus 198 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 277 (535)
..+++++.+++.|++.|++.+...|...+++.++ +++|+++++......++|.++||++++++.+++|||..|++.++
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~ 166 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTA 166 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 3457788889999999999888889888887776 35688899999999999999999999999999999999998876
Q ss_pred HHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHH
Q 009409 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (535)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (535)
..++..+.....++++++.++ ++. .+.....+++++|+|.+|...+..++..........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~ 226 (382)
T PRK11128 167 GVASMLLGQLLRPTIMPQGES---RQQ-----------------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYG 226 (382)
T ss_pred HHHHHHHHHHccCCCCCcccc---ccc-----------------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHH
Confidence 554444333333332111100 000 000122467899999999988888887777777888
Q ss_pred hhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHH
Q 009409 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHW 437 (535)
Q Consensus 358 ~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (535)
+.|.|+++ .|++..+.|.+.....++.++...+.+++.||++++ .....+.+..++...+... .++.+.
T Consensus 227 ~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~l~~~~~~~~~~~~~~~~-~~~~~~ 295 (382)
T PRK11128 227 FSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR---------DLLLLSAICGVVRWGLMGS-TTALPW 295 (382)
T ss_pred HHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHHHHHh-hhhHHH
Confidence 89999965 799999999999988888889999999999998754 2233344444443333332 334455
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHH-HhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHH
Q 009409 438 EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN-TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFY 513 (535)
Q Consensus 438 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~ 513 (535)
.++..++.|+..+...+....+..+ .+++++++..++.+ ....+|..+||.++|.+.|..| + ..++..+++.+
T Consensus 296 ~~~~~~l~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~ 369 (382)
T PRK11128 296 LIVIQILHCGTFTVCHLAAMRYIAA-RPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVAL 369 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-CCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHH
Confidence 5566677777767666666655555 46777789999887 4456777999999999999986 3 34555444443
No 67
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=3.7e-29 Score=251.13 Aligned_cols=358 Identities=18% Similarity=0.163 Sum_probs=255.6
Q ss_pred HHHHhhhhhhHhhhhhhhcccC--CCccchhHHHHH-----HHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHH
Q 009409 124 VICNMDKVNLSVAIIPMSHRFG--WNSSVAGLVQSS-----FFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (535)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~g--~s~~~~~~~~s~-----~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (535)
+..++++..++...+.+.++.. .+..+.+.+.+. ..++..+++++.|+++||+|||+++..+.++.+++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3456788888888787777654 445555555443 233334688999999999999999999999998888777
Q ss_pred Hhhhhhhh--------HHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhc-----
Q 009409 197 PLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII----- 263 (535)
Q Consensus 197 ~~~~~~~~--------~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~----- 263 (535)
+ ..+++. .+++.|+++|++.+...+....++.|++++++|++..++...+..+|.+++++++..+.
T Consensus 83 ~-~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~ 161 (394)
T TIGR00883 83 G-LLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGD 161 (394)
T ss_pred h-hCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 5 455543 47899999999999999999999999999999999999999999999999999877654
Q ss_pred ---cccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHH--H
Q 009409 264 ---ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA--V 338 (535)
Q Consensus 264 ---~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 338 (535)
+..+||+.|++.+++.++..+.....+|+++.+..+. +++....++++.+++++ +
T Consensus 162 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~ 221 (394)
T TIGR00883 162 DALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQE--------------------KHKKKRGPIRETLTKHRKPF 221 (394)
T ss_pred HHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHh--------------------ccccccCCHHHHHHhchHHH
Confidence 3568999999877766555444444444322111000 00111223456666654 6
Q ss_pred HHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHH
Q 009409 339 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 418 (535)
Q Consensus 339 ~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 418 (535)
+...+..++.....+....++|.|+++.+|.+..+.+.+.....++.+++.++.+++.||+++| +.......
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--------~~~~~~~~ 293 (394)
T TIGR00883 222 LLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR--------PVLIIFTV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH--------HHHHHHHH
Confidence 6666777777777788889999999888899999999999999999999999999999999865 22221222
Q ss_pred HHHHHH-HHHhhh-cCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHH-HHhhhhhhhHHHHHHHHHh
Q 009409 419 LSPAVC-MTLSSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGIT-NTVGAVPGIVGVALTGYLL 495 (535)
Q Consensus 419 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~lg~~igp~i~G~l~ 495 (535)
+..... ...... ...+........++.+++.+...+.......+.+|+++|+++.|+. +....+|..++|.++|.+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~ 373 (394)
T TIGR00883 294 LAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALV 373 (394)
T ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHH
Confidence 221111 111111 1223333444455566666666666677777888999999999985 4556678889999999999
Q ss_pred cccCcchHHHHHHHH
Q 009409 496 DSTHSWSMSLFAPSI 510 (535)
Q Consensus 496 ~~~g~~~~~~~~~~~ 510 (535)
|+.|.+...++..++
T Consensus 374 ~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 374 AMTGDWYAIGYYLAA 388 (394)
T ss_pred HHcCcchhHHHHHHH
Confidence 998756655555443
No 68
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.5e-29 Score=255.66 Aligned_cols=400 Identities=17% Similarity=0.193 Sum_probs=310.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
|.+....++..+........++.+.+.++++++.+..+++|+.++....+.+..++.+.+.||+|.|.+.++|.++.+++
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g 124 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALG 124 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHH
Confidence 45566666666666666777788899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhH-HHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHH
Q 009409 193 TALLPLLAGFMPG-LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (535)
Q Consensus 193 ~~~~~~~~~~~~~-l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (535)
.++.+ ++++++. ++..-++.|+|.+..+......+..+|+ ++|+.+.|+..++.++|.++-|++..++.+..|||+.
T Consensus 125 ~~lss-F~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~ 202 (509)
T KOG2504|consen 125 LLLSS-FATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGA 202 (509)
T ss_pred HHHHH-HHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHH
Confidence 98876 5555554 4556789999999999999999998887 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCCC--------------------CCcch-hhhhhh--hhhhhhHHHhcc-----C
Q 009409 272 FYIFGLLGIAWFSGFKILQEGETSNGAT--------------------LAPRS-NYINMK--KSLSASLEEMGE-----S 323 (535)
Q Consensus 272 f~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~-~~~~~~--~~~~~~~~~~~~-----~ 323 (535)
+++.+.+.+-.++....+.+......+. ..... .....+ .......++.++ .
T Consensus 203 ~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (509)
T KOG2504|consen 203 LLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSP 282 (509)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccc
Confidence 9999998876666665555522221111 00000 000000 000000000011 0
Q ss_pred CCCCcH---HHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 009409 324 LKDVPW---KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (535)
Q Consensus 324 ~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~ 400 (535)
.+.... .++++++.++.+.+...+...+++....++|.|.. .+|++..++..+.++.++..++++++.|++.|+..
T Consensus 283 ~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~ 361 (509)
T KOG2504|consen 283 LQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPG 361 (509)
T ss_pred hhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccc
Confidence 111112 57899999999999999999999999999999997 67999999999999999999999999999999986
Q ss_pred HcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhh
Q 009409 401 ATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVG 480 (535)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 480 (535)
.+ +.....++.+..++....... ..+...++..++++|+..+.+.........+.++.++-..+.|+...+.
T Consensus 362 ~~-------~~~~~~~~ll~~gl~~~~~p~-~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~ 433 (509)
T KOG2504|consen 362 IR-------ALVLFLLTLLIAGLARLFLPF-ATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQ 433 (509)
T ss_pred cc-------hHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHh
Confidence 43 345555555555555533333 2233445556677788777766666667778899999999999999999
Q ss_pred hhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhc
Q 009409 481 AVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 523 (535)
Q Consensus 481 ~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 523 (535)
.++..+||++.|++.|..|+|...|+..+++.++++.+.+...
T Consensus 434 gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 434 GIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999999999999988877776655544
No 69
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=3.7e-28 Score=243.36 Aligned_cols=364 Identities=13% Similarity=0.054 Sum_probs=238.7
Q ss_pred HHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHH-HHHhhhccchhhhcccCCchhhH-HHHHHHHHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQ-TGVLIWSLATA 194 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~ 194 (535)
.+.+..++..+......+.+|. +.+++|.|.+++|++.+...+ ++.++++++++ +||+|||+.++ .+.++.+++..
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~ 97 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACT 97 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHH
Confidence 3344566777787888888777 678899999999999876655 55566655666 99999998754 45555555555
Q ss_pred HHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccch--hhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHH
Q 009409 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER--SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (535)
Q Consensus 195 ~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f 272 (535)
+.+ ++++++.+++.+.+.|...+...|....++.++.++++| +...++...+.++|.++||++++++.+++|||+.|
T Consensus 98 ~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f 176 (393)
T PRK15011 98 LFA-WNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMY 176 (393)
T ss_pred HHH-HhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHH
Confidence 543 566767766665555555567778888888887776555 34557888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-hhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhh
Q 009409 273 YIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (535)
Q Consensus 273 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (535)
++.++..++..+.. ..+|+.+++++... ++. +. .++ +.+..+......++....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----------------~~-----~~~--~~~~~~~~~~~~~~~~~~ 231 (393)
T PRK15011 177 LSAAVAFIVCGVMVWLFLPSMRKELPLAT--GTL----------------EA-----PRR--NRRDTLLLFVICTLMWGT 231 (393)
T ss_pred HHHHHHHHHHHHHHHhhcCccCCCCcccc--ccc----------------cc-----ccc--ccccHHHHHHHHHHHHHH
Confidence 99988776654443 34554432211100 000 00 000 112223333333444445
Q ss_pred hHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhc
Q 009409 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 431 (535)
Q Consensus 352 ~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (535)
.+.+..+.|.|+++.+|+++.+.+.+.....++.+++.++.|+++||+++| + .. ..+.......+.....
T Consensus 232 ~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-------~-~~-~~~~~~~~~~~~~~~~- 301 (393)
T PRK15011 232 NSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-------F-LM-RVAAVAGVCFYAGMLM- 301 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------H-HH-HHHHHHHHHHHHHHHH-
Confidence 556677899999888999999999888887788888999999999999865 2 11 2222222222222221
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHH
Q 009409 432 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 511 (535)
Q Consensus 432 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~ 511 (535)
.++........++.++..+...........+ ..|++++++.++++...++|..++|.++|.+.|..| +...+.+.+++
T Consensus 302 ~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~ 379 (393)
T PRK15011 302 AHSPAILLGLQLLNAIYIGILGGIGMLYFQD-LMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVM 379 (393)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHH
Confidence 2233333333333333333322222333334 445679999999999999999999999999999874 88888776665
Q ss_pred HHHHHHhhh
Q 009409 512 FYLTGTIVW 520 (535)
Q Consensus 512 ~~~~~~~~~ 520 (535)
.+++.++.+
T Consensus 380 ~~~~~~~~~ 388 (393)
T PRK15011 380 IIATLFCLL 388 (393)
T ss_pred HHHHHHHHH
Confidence 555444433
No 70
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5.4e-31 Score=249.68 Aligned_cols=379 Identities=15% Similarity=0.166 Sum_probs=280.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
.++.+.++++...+.++|++.+....+.+++.+|++.+..|++.+.+.+.+.++.|++|+++||++||+++.+|..+|++
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 34778888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc-hhH
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WES 270 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~ 270 (535)
+.++.+ +++.+|+++++|.+.|+|.+.+.|.++++++|.+|.++|++++++++.+..+|..+|.+.+..+.+..+ |||
T Consensus 111 Av~~~~-fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~ 189 (493)
T KOG1330|consen 111 AVFASG-FSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRW 189 (493)
T ss_pred HHHHHH-HHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEE
Confidence 998886 557789999999999999999999999999999999999999999999999999999999999998776 999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhh
Q 009409 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (535)
Q Consensus 271 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (535)
.|+..+++++++.++.+++.+++++....+.+.+.... + .........+.+.+++.+....+.+....+
T Consensus 190 af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~--~---------~~ts~~kDl~~l~~~~v~v~~sl~~~a~~f 258 (493)
T KOG1330|consen 190 AFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMV--K---------PFTSVWKDLKVLAKIKVFVLSSLGIIAAQF 258 (493)
T ss_pred EEEeehHHHHHHHHHHHhhccCcccccccccccCCcCC--C---------CccchHHHHHHHHccCceeeehHHHHHHHH
Confidence 99999999988776666655544433222211111000 0 000111123455666766666666666666
Q ss_pred hhHHHHHhhHHHHHHH---hCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHH--HHHHHHHHHHHHHH
Q 009409 351 GHYTCLSWLPTYFSEE---LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRK--ICQTIAFLSPAVCM 425 (535)
Q Consensus 351 ~~~~~~~~~p~~l~~~---~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 425 (535)
...++..|.|.++... .|++..+..++..+...++.+|..++|.++||+.+...+....+. .....+....+..+
T Consensus 259 v~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L 338 (493)
T KOG1330|consen 259 VIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFL 338 (493)
T ss_pred hccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHH
Confidence 6667777777776433 355555666677788888999999999999997764333221121 22222222223333
Q ss_pred HHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhh-hhhhccCCcchhHHHHHHHHhhhh-hhhHHHHHHHHHhcccCcch
Q 009409 426 TLSSIDLGLPHWEIVGILTAGLALSSFALSGLY-CTHQDISPEYASILLGITNTVGAV-PGIVGVALTGYLLDSTHSWS 502 (535)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~l-g~~igp~i~G~l~~~~g~~~ 502 (535)
.+.........+..+.++++|............ ...+.++|++|.++.++-..+..+ |.+-+|.+.|.+.|+.-++.
T Consensus 339 ~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 339 FLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 333332333444445555666655555444433 445668999999999998877655 55666669999998764454
No 71
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=3.5e-29 Score=248.89 Aligned_cols=347 Identities=17% Similarity=0.156 Sum_probs=242.3
Q ss_pred HHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (535)
..++.++..+.+...+.+..|. +.+++|+|..+.+++.+++.+++.++++++|+++||+|||+++.++.++.+++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 4566777778888999999996 999999999999999999999999999999999999999999999999999988777
Q ss_pred Hhhhh-hhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcc----------c
Q 009409 197 PLLAG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE----------N 265 (535)
Q Consensus 197 ~~~~~-~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~ 265 (535)
+ ..+ +++.+++.|+++|++.+. .+....++++++|+++|++++++......+|..+++.+++.+.. .
T Consensus 85 ~-~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 85 G-LAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred H-HHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 5 556 788999999999999654 56678899999999999999999998888888888887776654 3
Q ss_pred cchhHHHHH-HHHHHHHHH-HHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHH
Q 009409 266 LGWESVFYI-FGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 343 (535)
Q Consensus 266 ~gw~~~f~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (535)
.+||+.|++ .+++..+.. +.....+++++.++++.+.+.+ ..... .+........+.+++|+++...+
T Consensus 163 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T TIGR00886 163 LAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFK----GARWS------VGTGALGDQLKVFRDRHTWILAL 232 (366)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccc----ccccc------ccchhHHHHHHHHhccchhhHHH
Confidence 489999944 454443333 3333334333221111000000 00000 00000013456788888888888
Q ss_pred HHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHH
Q 009409 344 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV 423 (535)
Q Consensus 344 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (535)
..++.....+.+..+.|.|+++.+|+++.+++.+.....+.+++++++.|++.||+++| +...........+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-------~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 233 LYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-------RKLLMSFLGVAMGA 305 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-------hhHHHHHHHHHHHH
Confidence 87777777888899999999988999999999989999999999999999999999875 22222222222222
Q ss_pred HHHHhhhcCCCcHHH-HHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhh
Q 009409 424 CMTLSSIDLGLPHWE-IVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG 484 (535)
Q Consensus 424 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~ 484 (535)
.++......+...+. ....++.....+...........+ ..|+++|++.|+.+.++++|+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 306 FLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPH-IFRRATGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchh-hchhhcccHHHHHHHhccCCC
Confidence 222222111102222 222233333333322333333333 456899999999999988764
No 72
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=1.1e-27 Score=240.77 Aligned_cols=373 Identities=13% Similarity=0.092 Sum_probs=256.4
Q ss_pred HHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhccc-----CCch-hhHHHHHHHHHH
Q 009409 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-----GGRK-VLQTGVLIWSLA 192 (535)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----g~r~-~~~~~~~~~~~~ 192 (535)
+...++.+++........+|.+.++.|+|.+++|++..+... .+..+++|+++||+ |||| ++.++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 455677888888999999999999999999999999776665 58999999999999 7775 677777777766
Q ss_pred HHHHHhhh--hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc-cchh
Q 009409 193 TALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWE 269 (535)
Q Consensus 193 ~~~~~~~~--~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~ 269 (535)
..++.... ++++.+++..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+. .|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 66654432 34566777878888888889999999999999999999999999999999999999999999885 5999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHh
Q 009409 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (535)
Q Consensus 270 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (535)
..|++.+++.++..+..+..+|++++++++ ++. .+. ....+++++|+|.++...+..++..
T Consensus 162 ~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~--~~~-----~~~------------~~~~~~~l~~~~~~~~~l~~~~l~~ 222 (402)
T PRK11902 162 NTYLLMAGLMLAGALTTLWAPEPEVPARPP--RSL-----GEA------------VVGPLRDFFSRRGAWALLLLIVLYK 222 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccc--chh-----HHH------------HHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 999999887766655555555543321110 000 000 0113567889999888777766666
Q ss_pred hhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHH-HHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHH--HHHH
Q 009409 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPP-LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA--VCMT 426 (535)
Q Consensus 350 ~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 426 (535)
........+.+.++.+.+|+++.+.+++....+ ++.+++..+.+++.||++++ + ........... +.+.
T Consensus 223 ~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~-------~-~l~~~~~~~~l~~l~~~ 294 (402)
T PRK11902 223 LGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY-------R-SLMLFGVLQAVSNLGYW 294 (402)
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH-------H-HHHHHHHHHHHHHHHHH
Confidence 554444445556676778999999998876554 46889999999999999865 2 22111111111 1111
Q ss_pred HhhhcCCCcHHHHHHHHH----HHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcch
Q 009409 427 LSSIDLGLPHWEIVGILT----AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWS 502 (535)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~ 502 (535)
......++.+......++ .++..+........... .+..++..++.+....++..+++.++|.+.|..| |.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G-~~ 369 (402)
T PRK11902 295 VLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCN----RSFSATQYALLSALASVGRVYVGPTSGYLVEAYG-WP 369 (402)
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hH
Confidence 112222222323333222 22223322333333333 3334555677777777888878889999999985 88
Q ss_pred HHHHHHHHHHHHHHHhhhhhccC
Q 009409 503 MSLFAPSIFFYLTGTIVWLAFAS 525 (535)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~ 525 (535)
..|.+.+++.+++.++.+...++
T Consensus 370 ~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 370 GFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 88888777666655554444433
No 73
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=2.2e-28 Score=245.99 Aligned_cols=381 Identities=12% Similarity=0.071 Sum_probs=263.9
Q ss_pred HHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCC-chhhHHHHHHHHHHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQTGVLIWSLATAL 195 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~ 195 (535)
-+++.+|+.+.....+.+.++. +.+++|++..++|++.+++.++..++++++|+++||+|+ |+++.++.++.+++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 3566677777777787666555 677799999999999999999999999999999999965 77888887777677666
Q ss_pred HHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhc--------ccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc
Q 009409 196 LPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS--------IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (535)
Q Consensus 196 ~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~--------~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (535)
.. ..++++.+++.|++.|++.+...+...++..+. .....|.+.+| .+|.++||++++.+....+
T Consensus 86 ~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~ 158 (418)
T TIGR00889 86 AA-QVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELS 158 (418)
T ss_pred HH-HhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccch
Confidence 54 567778889999999998887777666654222 22223344444 5788999999988843334
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHH
Q 009409 268 WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC 347 (535)
Q Consensus 268 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 347 (535)
|+ .|++.+++.++..+..+.+||+++.++++ +. . . ++ . .....+.++|+|.++.+.+..++
T Consensus 159 ~~-~f~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~-~-~--~~-----------~-~~~~~~~~~k~~~~~~~~~~~~~ 219 (418)
T TIGR00889 159 NI-QLYITAGSSALLGVFALTLPDIPVAKSTA--KM-S-I--KV-----------M-LGLDAFILFKNKRMAIFFFFSML 219 (418)
T ss_pred hH-HHHHHHHHHHHHHHHHhcCCCCCCCcccc--cc-C-H--HH-----------H-hhhhHHHHhcCCCeeeHHHHHHH
Confidence 55 45566665555555555566543211110 00 0 0 00 0 00123567888988888777777
Q ss_pred HhhhhHHHHHhhHHHHHHHhCCCh--------hhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 009409 348 GSWGHYTCLSWLPTYFSEELSLNL--------TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (535)
Q Consensus 348 ~~~~~~~~~~~~p~~l~~~~g~s~--------~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 419 (535)
..........+.|.|+++ .|.++ ...+...+...+..+++.++.+++.||+|+| .....+.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r---------~~l~~~~~ 289 (418)
T TIGR00889 220 LGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK---------KVMLLSLV 289 (418)
T ss_pred HHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHH
Confidence 766666677888888865 46543 5668888999999999999999999999864 33334444
Q ss_pred HHHHHHHHhhhcCCCc---HHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHH-HhhhhhhhHHHHHHHHHh
Q 009409 420 SPAVCMTLSSIDLGLP---HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN-TVGAVPGIVGVALTGYLL 495 (535)
Q Consensus 420 ~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~lg~~igp~i~G~l~ 495 (535)
...+...+........ ...++..++.+++.+...+.....+.+..|++.|+++.|+.+ ....+|.++||.++|++.
T Consensus 290 ~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~ 369 (418)
T TIGR00889 290 AWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMV 369 (418)
T ss_pred HHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4444333333222111 223345566666666666666667778889999999999997 567899999999999999
Q ss_pred cccC-----cchHHHHHHHHHHHHHHHhhhhhccCCCCC-CCCCC
Q 009409 496 DSTH-----SWSMSLFAPSIFFYLTGTIVWLAFASSKPQ-NFSTR 534 (535)
Q Consensus 496 ~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 534 (535)
|..| +|...|.+.+++.++++++.+.+.+++++| +.|++
T Consensus 370 ~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 414 (418)
T TIGR00889 370 EKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAIKVDDR 414 (418)
T ss_pred HHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCCCCccc
Confidence 9865 378888888887777777777777766554 44554
No 74
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=8.5e-29 Score=250.43 Aligned_cols=380 Identities=12% Similarity=0.036 Sum_probs=250.8
Q ss_pred HHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (535)
.+.+.+++..+....+.+++|. +.+++|+|..+.|++.+++.+++.++++++|+++||+|||++++++..+.+++....
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~ 93 (420)
T PRK09528 14 IFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPF 93 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3345566666666777777777 455599999999999999999999999999999999999999988766655443222
Q ss_pred Hhh--h-----hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchh
Q 009409 197 PLL--A-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (535)
Q Consensus 197 ~~~--~-----~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (535)
... . ..+...++.+++.|.+.....+....+..+ . .+++++.+|......++|.+++|++++.+.+ .+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~ 170 (420)
T PRK09528 94 FIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQ 170 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCch
Confidence 111 1 111122333444444444444444443322 2 2567888899999999999999999999876 4899
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHh
Q 009409 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (535)
Q Consensus 270 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (535)
+.|++.+++.++..+..+..+++++++....+++++ + ++.......+..+|+|.++.+.+..++..
T Consensus 171 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----------~~~~~~~~~~~~l~~~~~~~l~l~~~~~~ 236 (420)
T PRK09528 171 INFWLGSGSALILLVLLFFAKPDAPSTAKVANALGA----N----------ASAVSLKDALALLKLPKFWFLVLYVIGVA 236 (420)
T ss_pred HhHHHHHHHHHHHHHHHhcccccccchhhhccchhc----c----------cccccHHHHHHHccCCCeEeehHHHHHHH
Confidence 999998887776665555554433222110000000 0 00000112346778888877666555555
Q ss_pred hhhHHHHHhhHHHHHHHh---CCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHH
Q 009409 350 WGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT 426 (535)
Q Consensus 350 ~~~~~~~~~~p~~l~~~~---g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (535)
..+.....++|.|+.+.+ +.+..+.|.+.+...++.+++.++.|++.||+++|+ ....+.++..+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~---------~~~~~~~l~~~~~~ 307 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKN---------ALLLAGTIMAVRII 307 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch---------hhHHHHHHHHHHHH
Confidence 555556667888876554 456677888889899999999999999999998762 12222333333333
Q ss_pred HhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHH-HHHhhhhhhhHHHHHHHHHhcccCcchHHH
Q 009409 427 LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGI-TNTVGAVPGIVGVALTGYLLDSTHSWSMSL 505 (535)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~lg~~igp~i~G~l~~~~g~~~~~~ 505 (535)
+... .++.++.+...++.++..+........+..+..+++.+++..+. .++...+|.+++|.+.|++.|..| |...|
T Consensus 308 l~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f 385 (420)
T PRK09528 308 GSGF-ATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTY 385 (420)
T ss_pred HHHh-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHH
Confidence 3332 23344444445555555555455555566677888888888766 677889999999999999999885 88889
Q ss_pred HHHHHHHHHHHHhhhhhccC
Q 009409 506 FAPSIFFYLTGTIVWLAFAS 525 (535)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~ 525 (535)
...+++.++..++.+...++
T Consensus 386 ~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 386 LILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 88777666665555544443
No 75
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.97 E-value=3.9e-28 Score=223.52 Aligned_cols=362 Identities=21% Similarity=0.236 Sum_probs=286.9
Q ss_pred HhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHH
Q 009409 127 NMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGL 206 (535)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l 206 (535)
--..+.++|.++.+.+++|+|.+.+|++.++..+...++.++..++.+|+|.++.+..++++.+++..+-... +...+
T Consensus 25 R~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~--~~~~L 102 (395)
T COG2807 25 RPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG--GLPLL 102 (395)
T ss_pred chhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc--cHHHH
Confidence 3566778899999999999999999999999999999999999999999999999999999999999887644 44788
Q ss_pred HHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc-chhHHHHHHHHHHHHHHHH
Q 009409 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSG 285 (535)
Q Consensus 207 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~~~~~~~~~~~ 285 (535)
+.+-.+.|.|.+......+.++-+.|| ++-+..+|+|....++|.++++.+...+.++. |||....+-++.+++.++.
T Consensus 103 ~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~ 181 (395)
T COG2807 103 FLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLI 181 (395)
T ss_pred HHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 78899999999999999999999999998887 7999999999988887777
Q ss_pred hhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHH
Q 009409 286 FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE 365 (535)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~ 365 (535)
++.-.. ++...... .+..+-..++|||..|.+.+.+.+.+..+|....|+|.++.|
T Consensus 182 WlPq~~-r~~~~~~~-----------------------~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~ 237 (395)
T COG2807 182 WLPQAL-REQAASIA-----------------------TKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID 237 (395)
T ss_pred Hhhhcc-cccccccc-----------------------cccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 655431 11100000 001112468899999999999999999999999999999986
Q ss_pred HhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHH
Q 009409 366 ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTA 445 (535)
Q Consensus 366 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (535)
. |+|+.++|.+.++..+..++..+....+.+|..++ |... ........+.+.-+.+.+...++.. .+++
T Consensus 238 ~-G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~-------r~~~-~~~~~~~l~G~~G~~~~P~~~~~lw--~~ll 306 (395)
T COG2807 238 R-GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQ-------RPLV-VLALLLMLVGLVGLLLAPGQLPILW--ALLL 306 (395)
T ss_pred c-CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc-------chHH-HHHHHHHHHHHHHHHHhhhhHHHHH--HHHH
Confidence 4 99999999999999999999999999999996654 2222 2222222222222222233323222 4666
Q ss_pred HHHHhhhhhhhhhhh-hhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhcc
Q 009409 446 GLALSSFALSGLYCT-HQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 446 g~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (535)
|++.+...+.....+ .+..+++..+...|+.+.++++-...||.+.|++.|..|+|...+...+.+.+++.+.-+..-|
T Consensus 307 G~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 307 GLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGR 386 (395)
T ss_pred hCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcch
Confidence 777555555555444 4446778899999999999999999999999999999999999988877766665555555444
Q ss_pred CC
Q 009409 525 SS 526 (535)
Q Consensus 525 ~~ 526 (535)
++
T Consensus 387 ~~ 388 (395)
T COG2807 387 NR 388 (395)
T ss_pred hH
Confidence 43
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=1.9e-28 Score=277.89 Aligned_cols=377 Identities=14% Similarity=0.080 Sum_probs=267.4
Q ss_pred HHHHHHHHHHHHHhhhhhhHhhhh-hhhcccCCCc-cchhHHHHHHHHHHHhhhccchhhhcccCCchhhHH--HHHHHH
Q 009409 115 LIGTTSLAFVICNMDKVNLSVAII-PMSHRFGWNS-SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT--GVLIWS 190 (535)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~-~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~--~~~~~~ 190 (535)
++...++..+..++....+..... .+..+.+.+. ...++..+++.+++.++++++|+++||+|||+++.. ...+..
T Consensus 16 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~ 95 (1140)
T PRK06814 16 LFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGI 95 (1140)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHH
Confidence 333334444444444444444433 3444444433 446888889999999999999999999999997643 222222
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhH
Q 009409 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (535)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 270 (535)
....+.++..++++.++++|+++|++.+...|+..+++.+++++++|++++|+..++.++|.++||+++|++.+..+|++
T Consensus 96 ~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~ 175 (1140)
T PRK06814 96 AALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVI 175 (1140)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 22223333457789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhh
Q 009409 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (535)
Q Consensus 271 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (535)
.|+..+++.++.++..+.++++++.......... .. ++ . ...++.+.+++.+|...+..++..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~-----~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1140)
T PRK06814 176 LVALLMGIAVLGWLASLFIPKTGNAAPDLKIDRN-II--RS-----T--------ITLLKYAKADKRIWLAILGISWFWL 239 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCCCCCCeeccc-hH--HH-----H--------HHHHHHHhcCchHHHHHHHHHHHHH
Confidence 9966555555555555666654432211111000 00 00 0 0135678889999999888888888
Q ss_pred hhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhh-
Q 009409 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS- 429 (535)
Q Consensus 351 ~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 429 (535)
..+.+..++|.|+++.+|.++...|++.+...++.++|.++.|++.++...++. .. ...++.....+.+..
T Consensus 240 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~-------~~-~~~~~~~~~~~~l~~~ 311 (1140)
T PRK06814 240 VGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLY-------VP-IGALLMGLFGLDLAFA 311 (1140)
T ss_pred HHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeee-------eh-HHHHHHHHHHHHHHhc
Confidence 888888999999999899999999999999999999999999999987654321 11 111111111111111
Q ss_pred -----------------hcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHH
Q 009409 430 -----------------IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTG 492 (535)
Q Consensus 430 -----------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G 492 (535)
....+.+..++..+++|++.+...+.....+.+..+++.+|+++|+.+++..+|..+++.++|
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g 391 (1140)
T PRK06814 312 SSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILA 391 (1140)
T ss_pred ccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHH
Confidence 111334445556667787777777777778888899999999999999999999999999999
Q ss_pred HHhcccCcchHHHHHHHHHHHHH
Q 009409 493 YLLDSTHSWSMSLFAPSIFFYLT 515 (535)
Q Consensus 493 ~l~~~~g~~~~~~~~~~~~~~~~ 515 (535)
.+.+...++...+++.+++.++.
T Consensus 392 ~l~~~~~~~~~~~~~~~~~~~~~ 414 (1140)
T PRK06814 392 LLQALGFSIPWIILFIALANLIV 414 (1140)
T ss_pred HHHHhccCHHHHHHHHHHHHHHH
Confidence 99865445666665544433333
No 77
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=8.2e-28 Score=244.18 Aligned_cols=378 Identities=17% Similarity=0.131 Sum_probs=288.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
+.+-.+.++.+++.++..+.....+.+..+..-|+...+++.++..+...+..+++|.++||++||++++.+.++.++..
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVA 89 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Confidence 44556667778888888888888888888888899999999999999999999999999999999999999988776655
Q ss_pred HHHHhhh----hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchh
Q 009409 194 ALLPLLA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (535)
Q Consensus 194 ~~~~~~~----~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (535)
++++... .+.+.+++.-++.|++.+...|...+++.+..|+++...++++.....+++.++||.++|.+....|-.
T Consensus 90 ~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~ 169 (524)
T PF05977_consen 90 LLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAA 169 (524)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 4443332 346788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHh
Q 009409 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (535)
Q Consensus 270 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (535)
+.|.+.++..++.+......+++.+++.. +++.. ... -+..++.+.++|.+...++..++..
T Consensus 170 ~~f~inalsfl~~i~~l~~~~~~~~~~~~---~~e~~-------~~~--------l~~G~ryv~~~~~l~~~l~~~~~~~ 231 (524)
T PF05977_consen 170 AAFLINALSFLISILALLRWKPPPPPSSL---PRERF-------FSA--------LREGLRYVRSSPPLRSVLLRSFLFN 231 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccccccc---chhhh-------hhh--------HHHHHHHHhcchHHHHHHHHHHHHH
Confidence 99999888776655555444433221111 11100 000 0112455666777776666666666
Q ss_pred hhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhh
Q 009409 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 429 (535)
Q Consensus 350 ~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (535)
+....+...+|.+.++.+|.++...|++.+..++|+++|.++.+++.+|++.+ .....+.+..++.++...
T Consensus 232 l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~---------~lv~~~~~~~a~~~~~la 302 (524)
T PF05977_consen 232 LFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR---------RLVLLASLLFALALLLLA 302 (524)
T ss_pred HhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc---------hhhHHHHHHHHHHHHHHh
Confidence 66666777899999999999999999999999999999999999988877543 122233333343333333
Q ss_pred hcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHH
Q 009409 430 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPS 509 (535)
Q Consensus 430 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~ 509 (535)
+ ..+.+...+.+++.|.+.........+..+...|++.+|+++++++++...+..+|..+.|.+.+..| ...++.+.+
T Consensus 303 l-~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~ 380 (524)
T PF05977_consen 303 L-SPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAG 380 (524)
T ss_pred c-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHH
Confidence 3 23344445566667777666666666777788999999999999999999999999999999999985 666776666
Q ss_pred HHHHHHHHhhh
Q 009409 510 IFFYLTGTIVW 520 (535)
Q Consensus 510 ~~~~~~~~~~~ 520 (535)
++.+++.++.+
T Consensus 381 ~~lll~~~~~~ 391 (524)
T PF05977_consen 381 AALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHH
Confidence 55555544443
No 78
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=8.9e-28 Score=224.67 Aligned_cols=357 Identities=16% Similarity=0.127 Sum_probs=283.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
..++.+...+++.++......+.+|.+++.++++..+++++...++.+|.++.++.|++.+|+|+|+.++.++.++++++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 34455566677777888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH--hhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc------
Q 009409 194 ALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN------ 265 (535)
Q Consensus 194 ~~~~--~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------ 265 (535)
.+.. ....++..+++.-|+.|.|.+...+..+.+++...++++....+++.+..+++|.+++|++++.+..+
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 8873 23466788999999999999999999999999999998999999999999999999999999988762
Q ss_pred -------------cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHh
Q 009409 266 -------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAI 332 (535)
Q Consensus 266 -------------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (535)
..|+++|.+.+...+++.+.....+.++.+....... +.+.....++
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~--------------------~~~~~~~~~l 232 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLG--------------------ASGSAGLSSL 232 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccc--------------------ccccchHHHH
Confidence 2488888888877766665555544333222111000 0001134688
Q ss_pred hhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHH
Q 009409 333 FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKI 412 (535)
Q Consensus 333 ~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 412 (535)
+++|+++...+..|++......+..|++.|+.+..|++..+++...+..+.+.++|++++.++..|+... |.
T Consensus 233 ~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~--------k~ 304 (422)
T COG0738 233 FQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE--------KY 304 (422)
T ss_pred HhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--------HH
Confidence 9999999999999999999999999999999887899999999999999999999999999999998653 23
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHH
Q 009409 413 CQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTG 492 (535)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G 492 (535)
+...+.....++..... .+..+.+.+.++.|++.+...|.......+..+ ++ ....|..-.+.-+|+++.|.+.|
T Consensus 305 Laf~a~~~ill~~~~~l---~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G 379 (422)
T COG0738 305 LAFYALIAILLLLAVAL---IGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQG 379 (422)
T ss_pred HHHHHHHHHHHHHHHHH---hcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHH
Confidence 32222222222222222 223566667788899999999988888888777 44 33444445556789999999999
Q ss_pred HHhcccCcchH
Q 009409 493 YLLDSTHSWSM 503 (535)
Q Consensus 493 ~l~~~~g~~~~ 503 (535)
++.|..|....
T Consensus 380 ~i~d~~g~~~~ 390 (422)
T COG0738 380 VIADMFGIQLT 390 (422)
T ss_pred HHHHhhhhHHH
Confidence 99999974333
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.97 E-value=1.6e-27 Score=239.21 Aligned_cols=376 Identities=12% Similarity=0.033 Sum_probs=260.7
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhhhh-hcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHH
Q 009409 116 IGTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (535)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (535)
+..+...+++.+.....+.+.+|.+ .+++|.+..+.|++.+++.+++.++++++|+++||+|||+.++.+....+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFA 83 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3455566777888888888888874 567999999999999999999999999999999999999999887666554433
Q ss_pred HHHh--h-----hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc
Q 009409 195 LLPL--L-----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (535)
Q Consensus 195 ~~~~--~-----~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (535)
.... . .+.+..+++.+++.|++.+...+....+..+.. ++++..+|......++|.++||++++.+.+ .+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~ 160 (396)
T TIGR00882 84 PFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-ID 160 (396)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cC
Confidence 2211 1 122334567788999998888888887776643 344567788888899999999999998865 59
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHH
Q 009409 268 WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC 347 (535)
Q Consensus 268 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 347 (535)
||+.|++.+++.++..+..+..++++++++... +..+ ..++..+..++++++|||.++.+.+..++
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 226 (396)
T TIGR00882 161 PQIVFWLGSGFALILMLLLMFAKPKAPSSATVA-NALG-------------ANASAFSLKLALELFRQRKFWMFVLYVVG 226 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh-cccc-------------cccCCCCHHHHHHHHcCCcHHHHHHHHHH
Confidence 999999988887766555444433322111000 0000 00001111235678899998877777666
Q ss_pred HhhhhHHHHHhhHHHHHHHh---CCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHH
Q 009409 348 GSWGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVC 424 (535)
Q Consensus 348 ~~~~~~~~~~~~p~~l~~~~---g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (535)
....+.....+.|.|+++.+ +.+....|.+.+...+..+++....+++.||+++|+ ...++....++.
T Consensus 227 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~---------~l~~~~~l~~l~ 297 (396)
T TIGR00882 227 VACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN---------ALLIAGTIMSVR 297 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch---------hHHHHHHHHHHH
Confidence 66666666678899987665 456667788888888999999999999999998752 222333333333
Q ss_pred HHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHH-HHHhhhhhhhHHHHHHHHHhcccCcchH
Q 009409 425 MTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGI-TNTVGAVPGIVGVALTGYLLDSTHSWSM 503 (535)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~lg~~igp~i~G~l~~~~g~~~~ 503 (535)
..+... .++.++.+...++.+.+.............+..+++.++++.+. .+....+|+.++|.++|++.|..| |..
T Consensus 298 ~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~ 375 (396)
T TIGR00882 298 IIGSSF-ATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQG 375 (396)
T ss_pred HHHHHh-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHH
Confidence 333222 33444445555555555443333333344555677777777766 678899999999999999999885 888
Q ss_pred HHHHHHHHHHHHHHhh
Q 009409 504 SLFAPSIFFYLTGTIV 519 (535)
Q Consensus 504 ~~~~~~~~~~~~~~~~ 519 (535)
+|.+.+++.++..++.
T Consensus 376 ~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 376 AYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9988777666655543
No 80
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.96 E-value=1.5e-28 Score=257.35 Aligned_cols=288 Identities=17% Similarity=0.174 Sum_probs=225.1
Q ss_pred HHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHH
Q 009409 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (535)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (535)
.++.+++.++...+.....+..++.+.++|+++..+.|++.+.+.+++.++.++.+++.||+|||+++.++.++++++++
T Consensus 34 ~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~l 113 (633)
T TIGR00805 34 FSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSF 113 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHH
Confidence 33455556777777788888999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhhh-------------------------------------------------h-hhhHHHHHHHHhhhccCCchhhH
Q 009409 195 LLPLLA-------------------------------------------------G-FMPGLVLSRVLVGIGEGVSPSAA 224 (535)
Q Consensus 195 ~~~~~~-------------------------------------------------~-~~~~l~~~~~~~G~~~~~~~~~~ 224 (535)
+.++.. + .+..++++|+++|+|.+..++..
T Consensus 114 l~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~ 193 (633)
T TIGR00805 114 LLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG 193 (633)
T ss_pred HHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC
Confidence 875321 0 24567899999999999999999
Q ss_pred HHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc----------------------chhHHHHHHHHHHHHH
Q 009409 225 TDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL----------------------GWESVFYIFGLLGIAW 282 (535)
Q Consensus 225 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----------------------gw~~~f~~~~~~~~~~ 282 (535)
.+++.|++|+++|+++++++..+..+|.++|+++++++.+.+ +|+..|++.+++.++.
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~ 273 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLT 273 (633)
T ss_pred chhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987542 2777888888887776
Q ss_pred HHHhhhcccCCCCCCCCCC-cchhhhhhhhhhhhhHHHhccCC--CCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhh
Q 009409 283 FSGFKILQEGETSNGATLA-PRSNYINMKKSLSASLEEMGESL--KDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 359 (535)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 359 (535)
.+.++++|++.+....... +.++....++.......+..... ....++.+++||.++...+..++.....+++.+|+
T Consensus 274 ~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~l 353 (633)
T TIGR00805 274 SIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFL 353 (633)
T ss_pred HHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666677665433211100 00000000000000000000000 01235688999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhHHHHHhhHHH-HHHHHHHHHHHHHHHHHHc
Q 009409 360 PTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIAT 402 (535)
Q Consensus 360 p~~l~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~~~~ 402 (535)
|.|+++.+|+++.+++++..+..+ +.+++.+++|+++||++.+
T Consensus 354 P~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 354 PKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 999999999999999998887776 5678999999999998744
No 81
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.96 E-value=5.1e-26 Score=232.04 Aligned_cols=407 Identities=14% Similarity=0.111 Sum_probs=280.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhh-cc--cCCCccchhHHHHHHHHHHHhhhccchhhhcc-cCCchhhHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMS-HR--FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIW 189 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~ 189 (535)
+.+..+.+..+...++.+...+.+|.+. ++ +|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.+++
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL 89 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHH
Confidence 3444555566666777777777777754 44 89999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccc---hhhHHHHHHHhhhhHHHHHhhhHHHhcccc
Q 009409 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE---RSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (535)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (535)
+++.++.+ .+++++.+++.|++.|+|.+...+...+++++++|+++ |+.++++++.+.++|.++||++++++.++.
T Consensus 90 ~~g~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~ 168 (475)
T TIGR00924 90 MLGHFMLA-MSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY 168 (475)
T ss_pred HHHHHHHH-hcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99987775 55566788889999999999999999999999998654 888999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhhhcccCCCCCC---CCCCcchhhhhhhh-------------hh--hhh-H----------
Q 009409 267 GWESVFYIFGLLGIAWFSGFKILQEGETSNG---ATLAPRSNYINMKK-------------SL--SAS-L---------- 317 (535)
Q Consensus 267 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------------~~--~~~-~---------- 317 (535)
||++.|++.++..++..+.+...++..++.+ ....++++...... .+ .+. .
T Consensus 169 g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (475)
T TIGR00924 169 GYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTL 248 (475)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 9999999988655544444433332211111 10011100000000 00 000 0
Q ss_pred ------HHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhh----HHHHHhhHHHHHHH
Q 009409 318 ------EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE----AAWVSILPPLASVL 387 (535)
Q Consensus 318 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~----~g~~~~~~~~~~~~ 387 (535)
.....+ +.....+..|...+..+.+...+....+....+.++.+.++..+.+... .+.+.++..+..++
T Consensus 249 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil 327 (475)
T TIGR00924 249 AVIIFFFRLAFK-PRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVV 327 (475)
T ss_pred HHHHHHHHHHHh-ccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHH
Confidence 000000 0011111122233444555555666666677777888887654443222 56778888888888
Q ss_pred HHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhh--------cCCCcHHHHHHHHHHHHHHhhhhhhhhhh
Q 009409 388 VTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI--------DLGLPHWEIVGILTAGLALSSFALSGLYC 459 (535)
Q Consensus 388 ~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 459 (535)
..++..++..|..+|+.......| +.+++++.++++..... ...+.+|.++..++.+++.....+.....
T Consensus 328 ~~p~~~~~~~~l~~~~~~~~~~~k--~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~ 405 (475)
T TIGR00924 328 GSPVLAMIWTRLGRKGKDPTTPLK--FTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSW 405 (475)
T ss_pred HHHHHHHHHHHHHhCCCCCCcHHH--HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 887777776677665332222122 23444444444333221 12356677888888999988888888888
Q ss_pred hhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhccC
Q 009409 460 THQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAS 525 (535)
Q Consensus 460 ~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (535)
..+..|++.||+++|+......+|..+++.+.+...+.. ++...|...++..++.+++.++..++
T Consensus 406 ~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 406 WTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ-GVTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 889899999999999999999999999999988777765 47767777776666666666555443
No 82
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.96 E-value=5.4e-26 Score=227.75 Aligned_cols=367 Identities=11% Similarity=0.054 Sum_probs=256.3
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHH--HHHHHHHHHhhhccc-hhhhcccCCchhhHHHHHHH-HH
Q 009409 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLV--QSSFFWGYALSQLPG-GWLAKIFGGRKVLQTGVLIW-SL 191 (535)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~--~s~~~~~~~~~~~~~-g~l~dr~g~r~~~~~~~~~~-~~ 191 (535)
+..+...++.+++......+.+|.+.++.|.|.+++|++ .++..+...+.++++ ++..||+||||..++...+. ++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 556777888999999999999999999999999999997 466677777777777 55789999999876555332 21
Q ss_pred HHHHHHhh--h-hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccch
Q 009409 192 ATALLPLL--A-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (535)
Q Consensus 192 ~~~~~~~~--~-~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (535)
+....... . .....++...++.++..+...+...++..|..++++++...+....+..+|.++|+...+++.++.||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 22222211 2 21234455556666777788888888888888888888888889888899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHH
Q 009409 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (535)
Q Consensus 269 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (535)
|..|++.+++.++..+..++++++++++++. ++ + +..++++.+|+|.++...+..++.
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~--~~-~-------------------~~~~~~~~l~~~~~~~~~~~~~l~ 220 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPEA--PL-A-------------------RRASLFRFFRRPLAWSLLALALLS 220 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcccc--ch-h-------------------hHHHHHHHHcCcCHHHHHHHHHHH
Confidence 9999999988776665555555443211100 00 0 011246788999888888888888
Q ss_pred hhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHH-HHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHH-HHHHH
Q 009409 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSP-AVCMT 426 (535)
Q Consensus 349 ~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 426 (535)
..+......+.+.|++| .|+++.+.|.+.....+ ..+++..+.|++.||++++ + ... .+.+.. ...+.
T Consensus 221 ~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~-------~-~l~-~~~~~~~~~~~~ 290 (390)
T TIGR02718 221 AMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW-------R-TFI-LGVGLAGSLALL 290 (390)
T ss_pred HHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH-------H-HHH-HHHHHHHHHHHH
Confidence 88888888899999986 69999999998887764 5667789999999999865 2 222 222212 11111
Q ss_pred Hhh-hc--CCCcHHH-HHHHHHHHHHHhhhhhhhhhhhhhccCC-cchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcc
Q 009409 427 LSS-ID--LGLPHWE-IVGILTAGLALSSFALSGLYCTHQDISP-EYASILLGITNTVGAVPGIVGVALTGYLLDSTHSW 501 (535)
Q Consensus 427 ~~~-~~--~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~ 501 (535)
... .. ....... .....+.++..+...........+..++ +.+++.+++.+...++|..++|.++|.++|..| +
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~ 369 (390)
T TIGR02718 291 WFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-Y 369 (390)
T ss_pred HHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-c
Confidence 111 10 1111222 2222222333333334444444455565 889999999999999999999999999999885 8
Q ss_pred hHHHHHHHHHHHHH
Q 009409 502 SMSLFAPSIFFYLT 515 (535)
Q Consensus 502 ~~~~~~~~~~~~~~ 515 (535)
...|...+++.+++
T Consensus 370 ~~~f~~~~~~~l~a 383 (390)
T TIGR02718 370 AGGFLSGTVLAVLA 383 (390)
T ss_pred HHHHHHHHHHHHHH
Confidence 77887766655444
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=1e-26 Score=264.76 Aligned_cols=367 Identities=16% Similarity=0.106 Sum_probs=255.5
Q ss_pred HHHHHHHH-hhhhhhHhhhhhhhcccCCCc--cchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHH
Q 009409 120 SLAFVICN-MDKVNLSVAIIPMSHRFGWNS--SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (535)
Q Consensus 120 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~s~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (535)
++..++.. .+........+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++..+..++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~ 94 (1146)
T PRK08633 15 LLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLI 94 (1146)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 33444433 333344444555666666654 447899999999999999999999999999999998877655554433
Q ss_pred H--hhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc--------c
Q 009409 197 P--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--------L 266 (535)
Q Consensus 197 ~--~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~ 266 (535)
. ...++++.++++|++.|++.+...+...+++.|++++++|++++|+...+..+|.++|+++++++.+. +
T Consensus 95 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~ 174 (1146)
T PRK08633 95 VLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEI 174 (1146)
T ss_pred HHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence 2 23466889999999999999999999999999999999999999999999999999999999999875 2
Q ss_pred -chhHHHHHHHHHH-HHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHH
Q 009409 267 -GWESVFYIFGLLG-IAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYA 344 (535)
Q Consensus 267 -gw~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 344 (535)
+|++.+.+.++.. ++.++..+.+++.++...... ++....... + ....++.+++++.++...+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~-----~~~~~~~l~~~~~~~~~~~~ 240 (1146)
T PRK08633 175 LGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF-DKKKYLFPK--------L-----LWRNLKLLRSDRVLWLAIIG 240 (1146)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc-cccccccHH--------H-----HHHHHHHHhcCcHHHHHHHH
Confidence 3445544444333 233334444554432221110 000000000 0 01124677888888888777
Q ss_pred HHHHhhhhHHHHHhhHHHHHHHhCCChh-hHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHH
Q 009409 345 HFCGSWGHYTCLSWLPTYFSEELSLNLT-EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV 423 (535)
Q Consensus 345 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~-~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (535)
.++.....+.+..++|.|+.+.+|++.. ..+++.+...++.+++.++.+++.||+++++. ..++.+..++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~---------~~~~~~~~~~ 311 (1146)
T PRK08633 241 LSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGL---------VPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccc---------hhHHHHHHHH
Confidence 7777777778888999999988999998 99999999999999999999999999875421 1222222222
Q ss_pred HHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchH
Q 009409 424 CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM 503 (535)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~ 503 (535)
++++... ..+.+..++.+++.|++.+.........+.+..+++.+|+++|+.+++..+|.++++.+++.+.....++..
T Consensus 312 ~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~ 390 (1146)
T PRK08633 312 SLFLLPT-APSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAG 390 (1146)
T ss_pred HHHHHHH-hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHH
Confidence 2222222 223344455566677777766666667777778999999999999999999998888887776553213334
Q ss_pred HHHHHHH
Q 009409 504 SLFAPSI 510 (535)
Q Consensus 504 ~~~~~~~ 510 (535)
.+++.++
T Consensus 391 ~~~~~~~ 397 (1146)
T PRK08633 391 LFYLIAL 397 (1146)
T ss_pred HHHHHHH
Confidence 4444333
No 84
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=8.1e-26 Score=230.50 Aligned_cols=406 Identities=12% Similarity=0.100 Sum_probs=264.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcc-cCCchhhHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSL 191 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~ 191 (535)
+-+..+++..+...++.+.....++. +.+++|++..+.+++.+.+.....+..+++|+++|| +|||++++++.+++++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 44444555555566666666655444 677899999999999999998888889999999999 9999999999999999
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhccccc--chhhHHHHHHHhhhhHHHHHhhhHHHhccccchh
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (535)
+.+++....+....+++.|+++|+|.|...|...+++.|.+|++ +|++++++++.+.++|.++||.+++++.++.|||
T Consensus 94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~ 173 (489)
T PRK10207 94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYS 173 (489)
T ss_pred HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChH
Confidence 99887543332334558999999999999999999999999876 4578999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCC---C-CCCCcchhhhh-----------hhhhhhh-hHHH--------------
Q 009409 270 SVFYIFGLLGIAWFSGFKILQEGETSN---G-ATLAPRSNYIN-----------MKKSLSA-SLEE-------------- 319 (535)
Q Consensus 270 ~~f~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~-----------~~~~~~~-~~~~-------------- 319 (535)
+.|++.++..++.++.+...++..++. . ....+...... ....... ....
T Consensus 174 ~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f 253 (489)
T PRK10207 174 VTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIF 253 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 999997654443333333333221111 1 00011101000 0000000 0000
Q ss_pred hccCCCCCcHHHhhhcHHHHHHHHH--HHHHhhhhHHHHHhhHHHHHHHhCCChh----hHHHHHhhHHHHHHHHHHHHH
Q 009409 320 MGESLKDVPWKAIFRSKAVWAMIYA--HFCGSWGHYTCLSWLPTYFSEELSLNLT----EAAWVSILPPLASVLVTSIAA 393 (535)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~p~~l~~~~g~s~~----~~g~~~~~~~~~~~~~~~~~g 393 (535)
..+..+. .+.+|+|.+....+. ..+....+....+.++.+.++..+.+.. ....+..+..+..++..++.+
T Consensus 254 ~~~~~~~---~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~ 330 (489)
T PRK10207 254 FREAFKL---DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILA 330 (489)
T ss_pred HHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHH
Confidence 0000000 145566655443322 3344444555567788888653333110 112233445566667888889
Q ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHH-------hhhc--CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhcc
Q 009409 394 QFADNLIATGVETTMVRKICQTIAFLSPAVCMTL-------SSID--LGLPHWEIVGILTAGLALSSFALSGLYCTHQDI 464 (535)
Q Consensus 394 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 464 (535)
++.||+++|+.......+... ++++.++++.. .... ..+.++.+...++.+++.....+.....+.+..
T Consensus 331 ~l~~rl~~r~~~~~~~~k~~~--G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~a 408 (489)
T PRK10207 331 GIYTHLGSKGKDLSMPMKFTL--GMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALV 408 (489)
T ss_pred HHHHHHhhCCCCCCcHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence 999999988654443344333 22222222211 1111 123455666778889999988999899999999
Q ss_pred CCcchhHHHHHHHHhhhhhhhHHHHHHHHHhc---------ccCcchHHHHHHHHHHHHHHHhhhhhcc
Q 009409 465 SPEYASILLGITNTVGAVPGIVGVALTGYLLD---------STHSWSMSLFAPSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 465 ~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (535)
|++.+|.++|+.+...++|+.++..+.+.... ..+.+...|...++..++++++++...+
T Consensus 409 P~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 409 PQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888875531 0113566777766666666666655444
No 85
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=2.6e-27 Score=219.74 Aligned_cols=352 Identities=14% Similarity=0.109 Sum_probs=268.0
Q ss_pred hhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccC
Q 009409 139 PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG 218 (535)
Q Consensus 139 ~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~ 218 (535)
.=.++.+-+.+++|++++.+.+...+..++.|.+.||+|+|..+++|++++...+++++ +.++++++++.|.++|+|.+
T Consensus 96 ~~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFa-fg~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 96 AEAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFA-FGNSYPMLFVARSLQGVGSA 174 (464)
T ss_pred hhccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHH-HcchhHHHHHHHHHhhhhHH
Confidence 34455677899999999999999999999999999999999999999999999998885 77888999999999999999
Q ss_pred CchhhHHHHhhhccccc-chhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 009409 219 VSPSAATDLIARSIPLE-ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 297 (535)
Q Consensus 219 ~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (535)
.......++++|.||++ ||++++|+...+.++|..+||++||.+.+..|.+..|++.+++.++-..+.+++.++.+.+.
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 99999999999999864 57999999999999999999999999999999999999999999887777777666544333
Q ss_pred CCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHH
Q 009409 298 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV 377 (535)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~ 377 (535)
+.. .+..++.+++++|.++.........+.+....-..++.++.|.+.-+..+.|+.
T Consensus 255 ~~~-----------------------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~ 311 (464)
T KOG3764|consen 255 DST-----------------------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLA 311 (464)
T ss_pred ccc-----------------------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeee
Confidence 111 113356899999999998887777777777778889999988888556699999
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhh
Q 009409 378 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGL 457 (535)
Q Consensus 378 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 457 (535)
+....+...++..+.|.+.||++.. |......+.+............. +..-+++-.+..+++.+.......
T Consensus 312 fLp~~~~y~ig~~lfg~la~k~~~~-------~wl~~~~gl~~~G~~~~~iP~~~-~~~~L~vp~~~l~~~i~~~dasl~ 383 (464)
T KOG3764|consen 312 FLPASLSYAIGTNLFGKLADKYPHL-------RWLLSLGGLATVGVSSGPIPFAT-SIAQLWVPNFGLGFGIGLADASLI 383 (464)
T ss_pred ecccccchhccCchHHHHHHhcCch-------hHHHHHHHHHHHHHHhchhHhhh-hHHHHhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999854 22222233333332222222211 111122222222333232222222
Q ss_pred h---hhhhccCC---cchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhc
Q 009409 458 Y---CTHQDISP---EYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 523 (535)
Q Consensus 458 ~---~~~~~~~~---~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 523 (535)
. ...+.... +..|.+.++......+|..+||.++|.+.+..| +.+...+.+..-++-+.++.+.+
T Consensus 384 P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG-F~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 384 PTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG-FEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred hhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22222222 267899999999999999999999999999986 77776666665555555544443
No 86
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=1.4e-25 Score=222.09 Aligned_cols=320 Identities=13% Similarity=0.056 Sum_probs=230.9
Q ss_pred hhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhccc-----CCchhh-HHHHHHHHHHHHHHHhhh--hh
Q 009409 131 VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-----GGRKVL-QTGVLIWSLATALLPLLA--GF 202 (535)
Q Consensus 131 ~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----g~r~~~-~~~~~~~~~~~~~~~~~~--~~ 202 (535)
..+++..|.+.+|+|+|.+++|+..+. .+...+ .+++|+++||+ ||||.+ +.+.++.++.....++.. .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456778899999999999999999755 555555 89999999998 898874 566666666655554332 34
Q ss_pred hhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc--------hhHHHHH
Q 009409 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG--------WESVFYI 274 (535)
Q Consensus 203 ~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--------w~~~f~~ 274 (535)
.+.+....++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+..| ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 45577777888888888899999999999999999999999999999999999999999988888 9999999
Q ss_pred HHHHHHHHHHHhhhc-ccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHH---HHHHHHHHHHHhh
Q 009409 275 FGLLGIAWFSGFKIL-QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA---VWAMIYAHFCGSW 350 (535)
Q Consensus 275 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~ 350 (535)
.++..++..+..++. +|+++.++ . +++.. + + .+..++.++++|. ++.+.+..++...
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~-~--~~~~~----~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDAS-V--PKPLT----Q---A---------VLKPIREFFQRKNMIQALLLLLLIVLYKL 223 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCcccc-c--chhHH----H---H---------HHHHHHHHHHhcCchHHHHHHHHHHHHHH
Confidence 988776655554433 43221110 0 00000 0 0 0112456667664 7777777777788
Q ss_pred hhHHHHHhhHHHHHHHhCCChhhHHHHHhhHH-HHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhh
Q 009409 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPP-LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 429 (535)
Q Consensus 351 ~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (535)
+.+....++|.|+++ +|++..+.+.+....+ +..+++.++++++.||+++| + .. ....++.++...+..
T Consensus 224 ~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~-------~-~l-~~~~~~~~~~~~~~~ 293 (356)
T TIGR00901 224 GDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL-------Y-AL-LLFGIVQALTNAGFV 293 (356)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH-------H-HH-HHHHHHHHHHHHHHH
Confidence 888889999999987 8999999998877665 56789999999999999865 2 22 222222222222211
Q ss_pred hc--C--------CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhh
Q 009409 430 ID--L--------GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGA 481 (535)
Q Consensus 430 ~~--~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 481 (535)
.. . ...+......++.+++.+...+.......+..|++++|+.+|+.++..+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 294 WLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 11 1 1223344445556777777777888888888999999999999988765
No 87
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=8.5e-25 Score=222.80 Aligned_cols=343 Identities=13% Similarity=0.095 Sum_probs=236.1
Q ss_pred HhhhhhhHhh-hhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcc----cCCch-hhHHHHHHHHHHHHHHHhhh
Q 009409 127 NMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRK-VLQTGVLIWSLATALLPLLA 200 (535)
Q Consensus 127 ~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~g~r~-~~~~~~~~~~~~~~~~~~~~ 200 (535)
.+....+..+ .+.+.+++|++..++|++.++..+..++..++.|+++|| +|||| .++.+...++++.+++. ..
T Consensus 12 ~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~-~~ 90 (437)
T TIGR00792 12 NFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF-TT 90 (437)
T ss_pred HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH-hC
Confidence 3444445544 445778899999999999999999999999999999998 67744 56677777776665553 33
Q ss_pred hh------hhHHHHHHHHhhhccCCchhhHHHHhhhcc-cccchhhHHHHHHHhhhhHHHHHhhhHHHhcc-------cc
Q 009409 201 GF------MPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NL 266 (535)
Q Consensus 201 ~~------~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~ 266 (535)
++ ...+++.+++.+++.+...+...++..+.. ++++|++..++...+..+|..+++.+.+.+.. ..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~ 170 (437)
T TIGR00792 91 PDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKF 170 (437)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 22 345667788888888887777788888887 56899999999999888888887776655542 45
Q ss_pred chhHHHHHHHHHHHHHHHHh-hhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHH
Q 009409 267 GWESVFYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH 345 (535)
Q Consensus 267 gw~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (535)
+||+.+++.+++.++..+.. +..+|++++...+.+++. .....++.+++||.++...+..
T Consensus 171 g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~-------------------~~~~~~~~l~~~~~~~~~~~~~ 231 (437)
T TIGR00792 171 GWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEKKL-------------------SLKQIFKALFKNDQLLILCLAY 231 (437)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccCC-------------------CHHHHHHHHhCCHHHHHHHHHH
Confidence 89999999988876665443 444443311110000000 0011246788999999888888
Q ss_pred HHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHH
Q 009409 346 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCM 425 (535)
Q Consensus 346 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (535)
++...+.+....+.+.|.+..++ +....+.+.....++.+++.++.+++.||+|+| .....+....++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~---------~~~~~~~~~~~~~~ 301 (437)
T TIGR00792 232 LFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK---------ILFAGGILLMVLGY 301 (437)
T ss_pred HHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHH
Confidence 88877777766666767655555 455667777778899999999999999999864 22223333333333
Q ss_pred HHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhcc-------CCcchhHHHHHHHHhhhhhhhHHHHHHHHHhccc
Q 009409 426 TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDI-------SPEYASILLGITNTVGAVPGIVGVALTGYLLDST 498 (535)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~ 498 (535)
.......++.....+..++.+++.+...+.......+.. +++.+|++.|+.++...+|..+++.+.|.+.+..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 302 LIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred HHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 333222222333344445556665555544444444433 3566899999999999999999999999999876
Q ss_pred C
Q 009409 499 H 499 (535)
Q Consensus 499 g 499 (535)
|
T Consensus 382 G 382 (437)
T TIGR00792 382 G 382 (437)
T ss_pred C
Confidence 4
No 88
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=4e-25 Score=214.35 Aligned_cols=391 Identities=13% Similarity=0.036 Sum_probs=264.7
Q ss_pred HHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccc-hhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSV-AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
...++|+..|+ ---+.+.+.+.|.+.+++|+|..+ .|.+.+++..+|+++++++|+++||+|.|+++.++.+.+++..
T Consensus 28 ~~~~lC~fGF~-~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t 106 (511)
T TIGR00806 28 LVLYLCFYGFM-AQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVW 106 (511)
T ss_pred HHHHHHHHHHH-HHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 33334444433 345778888999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHH
Q 009409 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (535)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 273 (535)
++++ +++++..+.+.|++.|++.|... ....++..|+|+++|+++.|+..++..+|.++++++++. ...+|||+.+.
T Consensus 107 ~L~~-fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~ 183 (511)
T TIGR00806 107 LLLL-LGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYST 183 (511)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHH
Confidence 8886 57778999999999999999999 999999999999999999999999999999999999999 45679997665
Q ss_pred HHHH---HHHHHHHHhhhcccCCCCCCCCCCcc---h---hhhhh-hhhhhhhHHHhccC------CCCCcHHHhhhcHH
Q 009409 274 IFGL---LGIAWFSGFKILQEGETSNGATLAPR---S---NYINM-KKSLSASLEEMGES------LKDVPWKAIFRSKA 337 (535)
Q Consensus 274 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 337 (535)
+.-+ ...+.+++.+++|.+++..-..+.+. . +.... .+......+..+.. .-...++...+|+.
T Consensus 184 Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~ 263 (511)
T TIGR00806 184 LNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQ 263 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcc
Confidence 5432 23455666777775544211111000 0 00000 00000000000000 00112456678888
Q ss_pred HHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHH
Q 009409 338 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 417 (535)
Q Consensus 338 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 417 (535)
+..-.+-+.+..++++.+.+|......+.-+-....-|.+-++..+.+.+..+..|++-.++.+ .....+.+.
T Consensus 264 vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~-------~~~l~l~v~ 336 (511)
T TIGR00806 264 LLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWAR-------WSKLLIAVV 336 (511)
T ss_pred hhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchh-------hHHHHHHHH
Confidence 8888888888889999999988888865533222255667788888888888888887544321 012233333
Q ss_pred HHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHH----HH
Q 009409 418 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT----GY 493 (535)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~----G~ 493 (535)
.++-+.++++.. ..++.+...++.++++.......+.....++.....+..|..+|+++++..+-..+-..+. |.
T Consensus 337 s~~~~gll~~m~-~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl 415 (511)
T TIGR00806 337 SAIQAGLVFWMS-QSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKRGL 415 (511)
T ss_pred HHHHHHHhhhhh-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEccccc
Confidence 333333333332 2445566667777777777766666777777888888889999999987765544444332 22
Q ss_pred ---HhcccCcchHHHHHHHHHHHHHHH
Q 009409 494 ---LLDSTHSWSMSLFAPSIFFYLTGT 517 (535)
Q Consensus 494 ---l~~~~g~~~~~~~~~~~~~~~~~~ 517 (535)
+.+.+--|..-|.+++++.++..+
T Consensus 416 ~l~i~~Qf~vY~~yf~~~~~i~~~~~~ 442 (511)
T TIGR00806 416 GLQVRKQFRIYSVYFLVLSIICFFGAG 442 (511)
T ss_pred CCCceeEEEehhhHHHHHHHHHHHHHH
Confidence 111121345455555554444444
No 89
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.94 E-value=6.8e-24 Score=209.60 Aligned_cols=375 Identities=15% Similarity=0.136 Sum_probs=272.8
Q ss_pred HHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccC-CchhhHHHHHHHHHHHHHHH
Q 009409 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-GRKVLQTGVLIWSLATALLP 197 (535)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g-~r~~~~~~~~~~~~~~~~~~ 197 (535)
++..+|+.+.....+.|+++.+.++.|+|..|+|.+.++..+...+.++++|.++||.+ +|+++.+..++.++.....
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~- 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL- 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH-
Confidence 34566677777788889999999999999999999999999999999999999999986 5677767666655555444
Q ss_pred hhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhH-HHhcccc---chhHHHH
Q 009409 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA-PPIIENL---GWESVFY 273 (535)
Q Consensus 198 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~-~~l~~~~---gw~~~f~ 273 (535)
...++++.+++..++..+......|...++..+..+ ++++..|-....+++|.+++.+.. +.+.... +..+.++
T Consensus 86 ~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 86 AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 456667888888888888888888999988888775 566778888888888888886552 3333332 2345566
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhH
Q 009409 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (535)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (535)
+.++..++.....+.+|+.++++..+...++. ......+++|+|++..+.+..++......
T Consensus 164 i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~~~-------------------~~~~~~~llk~~~~~~Fll~~~l~~~~~~ 224 (400)
T PF03825_consen 164 IAAILSLLLAGFALFLPKTPPKRSAKESVKKL-------------------LGLDALKLLKNPRFLVFLLAAFLIGISHA 224 (400)
T ss_pred HHHHHHHHHHHHHHhCCCCccccccCCCcccc-------------------cchHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 66665555555555666654222111111000 00112478999999999999999998888
Q ss_pred HHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCC
Q 009409 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG 433 (535)
Q Consensus 354 ~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (535)
...++.+.|+++.-|.+....+.++++..+.+++.-...+++..|+|.+ .++.++.+..++=..++....+
T Consensus 225 ~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~---------~ll~~a~~~~~vR~~l~a~~~~ 295 (400)
T PF03825_consen 225 AYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK---------WLLLLALVAYAVRWLLYAYFSD 295 (400)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHhcC
Confidence 8999999999865447888888888898999999999999999999754 4455566666665555555433
Q ss_pred CcHHHHHH----HHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHh-hhhhhhHHHHHHHHHhcccCc-----chH
Q 009409 434 LPHWEIVG----ILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTV-GAVPGIVGVALTGYLLDSTHS-----WSM 503 (535)
Q Consensus 434 ~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~lg~~igp~i~G~l~~~~g~-----~~~ 503 (535)
+.+..... ..+.|+.++.+......++.+..|++.|+++.|+++.. .++|..+|..++|+++|.+|. +..
T Consensus 296 ~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~ 375 (400)
T PF03825_consen 296 PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSA 375 (400)
T ss_pred CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHH
Confidence 33332222 24588888888899999999999999999999998875 579999999999999998752 234
Q ss_pred HHHHHHHHHHHHHHhhhhhcc
Q 009409 504 SLFAPSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~ 524 (535)
.+.+.+++.++..++.++.+|
T Consensus 376 ~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 376 VFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHHHHHHHHHHHHHHhhcc
Confidence 445555544444444444444
No 90
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.94 E-value=1.4e-23 Score=203.07 Aligned_cols=392 Identities=13% Similarity=0.069 Sum_probs=271.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhc-ccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (535)
|++....+...+++.++..++..++.|...+ +.|+|.+++|.+.++..+...+.+++.|.++||+|.||-++....+..
T Consensus 5 ~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 5 KNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILL 84 (412)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHH
Confidence 3455666677777788888899999888554 599999999999999999999999999999999997776554433221
Q ss_pred H--HHHHH----Hhhhhh-hhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhc
Q 009409 191 L--ATALL----PLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII 263 (535)
Q Consensus 191 ~--~~~~~----~~~~~~-~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 263 (535)
+ +.... .+...| +...+++.+..|++.....|...+++.++. ++.+.-.|-..+.+++|.+++..++|.+.
T Consensus 85 ~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~ 162 (412)
T PF01306_consen 85 LLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILF 162 (412)
T ss_dssp HTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheee
Confidence 1 11111 111222 223344444556666666677777766654 46678889999999999999999999998
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHH
Q 009409 264 ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 343 (535)
Q Consensus 264 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (535)
+ .+-+..||+..+.+++..++.+..+++.+++....+....+ +++.+.....+++|+|++|.+.+
T Consensus 163 ~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~k~~~fw~~~l 227 (412)
T PF01306_consen 163 N-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAK--------------KDKVSLKDVLSLFKMRNFWFFVL 227 (412)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS--------------------HHHHHHHTTSHHHHHHHH
T ss_pred e-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccC--------------CCCCcHHHHHHHhcchhHHHHHH
Confidence 6 46678888877666555555444443322221111111000 00000112368899999999998
Q ss_pred HHHHHhhhhHHHHHhhHHHHHHHh---CCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHH
Q 009409 344 AHFCGSWGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS 420 (535)
Q Consensus 344 ~~~~~~~~~~~~~~~~p~~l~~~~---g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 420 (535)
........++.+....|.|+...+ +.+....|.+.+...+..++...+..++.+|+|.| ....++..+
T Consensus 228 ~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k---------~~Lllag~i 298 (412)
T PF01306_consen 228 FVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK---------NLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH---------hHHHHHHHH
Confidence 888888888888778888887533 33456688899999999999999999999999965 344444555
Q ss_pred HHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHH-HHhhhhhhhHHHHHHHHHhcccC
Q 009409 421 PAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGIT-NTVGAVPGIVGVALTGYLLDSTH 499 (535)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~lg~~igp~i~G~l~~~~g 499 (535)
+.+=...... .++++++.+.-.+.++-.........-++.+.++++..++...+. +...++|.++.+.++|.++|+.|
T Consensus 299 ~~iRi~~~~~-~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G 377 (412)
T PF01306_consen 299 MAIRIIGSGF-ATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG 377 (412)
T ss_dssp HHHHHHHHHT---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhh-hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC
Confidence 5555444443 445666777778888888888888888899999999999999995 67789999999999999999995
Q ss_pred cchHHHHHHHHHHHHHHHhhhhhccCCCCCCC
Q 009409 500 SWSMSLFAPSIFFYLTGTIVWLAFASSKPQNF 531 (535)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (535)
+...|++++.+.+...++..+..++.|++..
T Consensus 378 -~~~tylimg~iv~~~~li~~f~l~~~~~~~~ 408 (412)
T PF01306_consen 378 -FQHTYLIMGLIVLPFTLISAFTLKKDKKQIV 408 (412)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHS--SSSTTC
T ss_pred -cHHHHHHHHHHHHHHHHHheeeecCCCcccc
Confidence 8888888888777777777777776666543
No 91
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.93 E-value=3.7e-24 Score=197.65 Aligned_cols=355 Identities=15% Similarity=0.084 Sum_probs=232.6
Q ss_pred hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCC
Q 009409 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGV 219 (535)
Q Consensus 140 ~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~ 219 (535)
..+..+.+..-.|.+.+.|.+...+.++.+|.++||+|||++++++.+..++..++. ..+.++..+++.|++.|+..+-
T Consensus 59 ~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~-~~S~~F~afv~aR~l~Gi~kgn 137 (451)
T KOG2615|consen 59 IGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLW-ALSRNFAAFVLARFLGGIFKGN 137 (451)
T ss_pred hCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhccCc
Confidence 333444566678999999999999999999999999999999999999988877776 4788876666669999999876
Q ss_pred chhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcc---ccchhHHHH---HHHHHHHH-HHHHhhhcccC
Q 009409 220 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE---NLGWESVFY---IFGLLGIA-WFSGFKILQEG 292 (535)
Q Consensus 220 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~gw~~~f~---~~~~~~~~-~~~~~~~~~~~ 292 (535)
. ....++++|++++++|+++++.+...+++|.++||.+||++.+ ..|--+.++ +..++... ...+.+++||+
T Consensus 138 l-~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 138 L-SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred h-HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 6 5678999999999999999999999999999999999999987 233222222 22222222 44566777777
Q ss_pred CCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHH-------HHHHHHHHHHhhhhHHHHHhhHHHHHH
Q 009409 293 ETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAV-------WAMIYAHFCGSWGHYTCLSWLPTYFSE 365 (535)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~p~~l~~ 365 (535)
-+.+++. ++.... .+...+. ++ ..+.++..-...+||++. ..+.+..+++...+-.+.++.+.+..+
T Consensus 217 L~~rk~~-~~~~~~---~~~~~~~-~~-~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~ 290 (451)
T KOG2615|consen 217 LPLRKRN-DEHSTL---QEAADDR-LA-LLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHG 290 (451)
T ss_pred ccchhhc-ccccch---hhhhhhh-hh-hcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcC
Confidence 5544333 110000 0000000 00 001111111123333322 223344444444444445555555567
Q ss_pred HhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHH
Q 009409 366 ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTA 445 (535)
Q Consensus 366 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (535)
.+|+++.+.|-+.+..++.+.+.+....+..+|.+.. .+ ......+...... +++... ...+..+..+..+.
T Consensus 291 rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~--~~---a~l~~~l~~~vP~--~llls~-~~~~~~l~~~s~l~ 362 (451)
T KOG2615|consen 291 RFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGN--IK---AVLLFSLLLIVPA--FLLLSL-ARTPVVLYLGSTLK 362 (451)
T ss_pred ccCCChhhheeeeehhhHHHHHHHHhccccccccccc--hh---hHHHHHHHHHHHH--HHHHhc-cccchhhhHHHHHH
Confidence 7899999999999999998888888877777776421 00 1111112122122 122222 23345556666666
Q ss_pred HHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHH
Q 009409 446 GLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI 510 (535)
Q Consensus 446 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~ 510 (535)
.+..+...+.....+....++++||+++|+..+.+.++-++||.+.|.+....-.-...+...+.
T Consensus 363 sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~ 427 (451)
T KOG2615|consen 363 SFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGA 427 (451)
T ss_pred HHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHH
Confidence 66666666666666777788899999999999999999999999999988765333334433333
No 92
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.93 E-value=6.5e-23 Score=210.42 Aligned_cols=397 Identities=12% Similarity=0.116 Sum_probs=245.4
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcc-cCCchhhHHHHHHHHHHH
Q 009409 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~ 193 (535)
+..+++..+...+..+.+.+.++. +.+++|++..+.+++.+.+........+++|+++|| +|||+++.++.++++++.
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~ 102 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY 102 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 334445555566666666666665 568899999999999888876666667899999999 599999999999999888
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccc--hhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHH
Q 009409 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE--RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (535)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (535)
.++....++.+.+++.|+++|++.+...+...+++.+++|+++ |..++++++.+.++|.++||.+++++.++.|||+.
T Consensus 103 ~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~ 182 (500)
T PRK09584 103 ALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVA 182 (500)
T ss_pred HHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHH
Confidence 7775433455667788999999999999999999999997543 45688999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh----hcccCCCCCCCCCCcchhhhh----------------hhhhhhhh----------HHHhc
Q 009409 272 FYIFGLLGIAWFSGFK----ILQEGETSNGATLAPRSNYIN----------------MKKSLSAS----------LEEMG 321 (535)
Q Consensus 272 f~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~----------~~~~~ 321 (535)
|++.++..++..+.+. .+++..+....++.+...... ........ .....
T Consensus 183 F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (500)
T PRK09584 183 FALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGK 262 (500)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 9998765444332222 222221111111111111000 00000000 00000
Q ss_pred cCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHH--HhCCCh------hhHHHHHhhHHHHHHHHHHHHH
Q 009409 322 ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE--ELSLNL------TEAAWVSILPPLASVLVTSIAA 393 (535)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~--~~g~s~------~~~g~~~~~~~~~~~~~~~~~g 393 (535)
.. ...++.-++| .+.. +..++....++......|.++.. ..+.+. ...+.+.++..+..++..++.+
T Consensus 263 ~~---~~~~~~~~~~-~~~~-~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~ 337 (500)
T PRK09584 263 EA---FAMKGAARRK-MIVA-FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILA 337 (500)
T ss_pred HH---hhcCHHHHHH-HHHH-HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHH
Confidence 00 0001111222 2222 22334445556666666766543 112221 1244556667777777777777
Q ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCC--------CcHHHHHHHHHHHHHHhhhhhhhhhhhhhccC
Q 009409 394 QFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG--------LPHWEIVGILTAGLALSSFALSGLYCTHQDIS 465 (535)
Q Consensus 394 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 465 (535)
++-+|.++|.. ....+.+++++.++++........ +.++.+...++.+++.....+.....+.+..|
T Consensus 338 ~~~~~l~~r~~-----~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP 412 (500)
T PRK09584 338 AIYNKMGDRLP-----MPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVP 412 (500)
T ss_pred HHHHHhCcCCC-----cHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCc
Confidence 77777655421 122334444444444443222111 23467777888899999889999999999899
Q ss_pred CcchhHHHHHHHHhhhhhhhHHHHHHHHHhc---------ccCcchHHHHHHHHHHHHHHHhhhhh
Q 009409 466 PEYASILLGITNTVGAVPGIVGVALTGYLLD---------STHSWSMSLFAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 466 ~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~~~ 522 (535)
++.||+++|+......+|..++..+.+.... ..+.+...|...++..++.+++.+..
T Consensus 413 ~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~ 478 (500)
T PRK09584 413 QRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLT 478 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998776665655555555542211 11225677776666555454444443
No 93
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=7.8e-23 Score=187.54 Aligned_cols=401 Identities=15% Similarity=0.137 Sum_probs=269.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
+..............+-....+-..|.+....|.+..+..++......+..++...||.++|++|||+.+.+..+..++.
T Consensus 77 ~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~ 156 (528)
T KOG0253|consen 77 WYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVF 156 (528)
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHH
Confidence 45555555555555555555566677788889999999999999999999999999999999999999999998887777
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHH
Q 009409 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (535)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f 272 (535)
..+- ..++++..+++.|.+.|+|.|+ .|...++-.+..|..+|...+-.. ..+.+|.++...++-....++||||..
T Consensus 157 ~~is-~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l 233 (528)
T KOG0253|consen 157 GVIS-GASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLL 233 (528)
T ss_pred HHhh-cCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 7665 4788889999999999999999 888899999999988888877776 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhh------------------hhhhHHH-----hcc---CCCC
Q 009409 273 YIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKS------------------LSASLEE-----MGE---SLKD 326 (535)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~-----~~~---~~~~ 326 (535)
...+....+...+.++++|.++..-.+..+.+.....++. .+.+.++ .+. +...
T Consensus 234 ~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~r 313 (528)
T KOG0253|consen 234 FTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVR 313 (528)
T ss_pred HHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccc
Confidence 9988777777888888888876543333222211110000 0000000 000 0111
Q ss_pred CcHHHhhhc---HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHH-----------------hC--CChhhHHHHHhhHHHH
Q 009409 327 VPWKAIFRS---KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE-----------------LS--LNLTEAAWVSILPPLA 384 (535)
Q Consensus 327 ~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~-----------------~g--~s~~~~g~~~~~~~~~ 384 (535)
....+++.. +..+.+...+|...+.+|+..-.....++.. .+ .+...--.=..+..+.
T Consensus 314 g~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitsla 393 (528)
T KOG0253|consen 314 GGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLA 393 (528)
T ss_pred cchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHh
Confidence 122333321 3334445555666666666544433333321 11 1111111123455678
Q ss_pred HHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhcc
Q 009409 385 SVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDI 464 (535)
Q Consensus 385 ~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 464 (535)
...|.++.+++.||+||| ..+...++..+++.++.....+...... ..+..-++..+.+.....+..+.+
T Consensus 394 efPGlLIt~~iverlGRK---------kTMal~l~~f~iflfll~~c~~rn~~tv-llf~arafisg~fqvaYvYtPEVy 463 (528)
T KOG0253|consen 394 EFPGLLITGVIVERLGRK---------KTMALSLILFGIFLFLLTTCKTRNAYTV-LLFTARAFISGAFQVAYVYTPEVY 463 (528)
T ss_pred hCCchhHHHHHHHHhcch---------hHHHHHHHHHHHHHHHHHHhcCcchhHH-HHHHHHHHHhchheEEEEecCccc
Confidence 889999999999999964 4555666666665555544444333222 223333333444445555667778
Q ss_pred CCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhccCCCCC
Q 009409 465 SPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQ 529 (535)
Q Consensus 465 ~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (535)
|...|+++.|..+.+..+|+++.|.++ ...+.. ...+..+.+++++++++++.++.-++|.+
T Consensus 464 PTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s--~sl~i~vy~~~~ilagIavcffPiEtkGR 525 (528)
T KOG0253|consen 464 PTAVRATGVGTCSSMARIGGIFSPVIA-MRAELS--TSLPIFVYGALFILAGIAVCFFPIETKGR 525 (528)
T ss_pred chhhhhcchhhhhhHHhhhhhhhhHHH-HHhccc--eeehHHHHHHHHHHHHHHheeeeeccCCC
Confidence 889999999999999999999999998 444442 33444445555666666666665555544
No 94
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.93 E-value=4.9e-23 Score=208.28 Aligned_cols=365 Identities=16% Similarity=0.183 Sum_probs=253.1
Q ss_pred HHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhh
Q 009409 120 SLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (535)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 199 (535)
++.....++.....+..++.+.+++|- .....|+.+.+.++..+..++.|+++|.+|||.+++.+.++..++.++.+ .
T Consensus 50 ~~~~~~~~~~~~~~a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~a-t 127 (599)
T PF06609_consen 50 SLAVIAAYFVLVLPASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCA-T 127 (599)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhh-c
Confidence 333333445555556677889999995 46778999999999999999999999999999999999999999998774 8
Q ss_pred hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHH
Q 009409 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (535)
Q Consensus 200 ~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~ 279 (535)
+++...++++..+.|+|.|... .....++|..|.+.|+...++......+....+|.++..+..+.+|||.|++.+++.
T Consensus 128 A~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~ 206 (599)
T PF06609_consen 128 AQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWS 206 (599)
T ss_pred CCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHH
Confidence 8888999999999999976665 456668999999999888887777666666678888887777789999999998876
Q ss_pred HHHHHHhhh--cccCCCCCCCCCCcchhhhhhh--------------------------hhhhhhH--------------
Q 009409 280 IAWFSGFKI--LQEGETSNGATLAPRSNYINMK--------------------------KSLSASL-------------- 317 (535)
Q Consensus 280 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~-------------- 317 (535)
.+.++..++ .|++.++.+.+...+.+...+- ..|.+..
T Consensus 207 ~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~ 286 (599)
T PF06609_consen 207 GIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVA 286 (599)
T ss_pred HHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHH
Confidence 554433322 2222221111111111111100 0011110
Q ss_pred ---HHhccC--CCCCcHHHhhhc-HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChh---hHHHHHhhHHHHHHHH
Q 009409 318 ---EEMGES--LKDVPWKAIFRS-KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLT---EAAWVSILPPLASVLV 388 (535)
Q Consensus 318 ---~~~~~~--~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~---~~g~~~~~~~~~~~~~ 388 (535)
-|.... ..-.| .+++|+ |.+...++..++....++....+.|......++-++. ..++.....+++..+|
T Consensus 287 F~~wE~~~~~~~Pl~P-~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g 365 (599)
T PF06609_consen 287 FVVWEWFGAPKDPLFP-HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAG 365 (599)
T ss_pred HHHhhhhccCCCCcCC-HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHH
Confidence 010001 11122 467777 5566666777888888888889999998877777653 5677778888888899
Q ss_pred HHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHH-HHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCc
Q 009409 389 TSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV-CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE 467 (535)
Q Consensus 389 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 467 (535)
..+.+.+..++++- |+.+..+.+.... +..+.....++....+...++.+++.+..........+-..|++
T Consensus 366 ~~i~g~l~~~ir~~--------Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~ 437 (599)
T PF06609_consen 366 AVILGLLFSKIRHI--------KWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDE 437 (599)
T ss_pred HHHHHHHHHHccch--------hHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCch
Confidence 99999999887532 2333333333332 22333344455445555566677777766666665565668999
Q ss_pred chhHHHHHHHHhhhhhhhHHHHHHHHHhc
Q 009409 468 YASILLGITNTVGAVPGIVGVALTGYLLD 496 (535)
Q Consensus 468 ~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 496 (535)
+.|++.|+..+++.+|+.+|..+..-++.
T Consensus 438 ~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 438 DIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999999999999999998876654
No 95
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=4.7e-23 Score=203.20 Aligned_cols=368 Identities=15% Similarity=0.133 Sum_probs=261.2
Q ss_pred hHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHH--hhhhhhhHHHHHHHHhhhccCCchhhHHHHhh
Q 009409 152 GLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (535)
Q Consensus 152 ~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~ 229 (535)
+.+.+++.+|.++|++..++++||+|||..+.++.++..++.++.. ...+++.+++++|++.|+..+........++.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~ 142 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLT 142 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 5677899999999999999999999999999988887666655443 34577899999999999999999999999999
Q ss_pred hcccccchhhHHHHHHHhhhhHHHHHhhhHH-Hhc-cccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhh
Q 009409 230 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAP-PII-ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI 307 (535)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~-~l~-~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (535)
|..|++.||..-.....+..+|..++..++. .+. +...|++.+.+..+.+++.++...++||+|+.--.++.++++..
T Consensus 143 E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~ 222 (485)
T KOG0569|consen 143 EISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEAR 222 (485)
T ss_pred hcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHH
Confidence 9999999999999999999999999966653 333 34569999999999999999999999999876443222222211
Q ss_pred ---hhhhhhh----------hhHHHh-ccCCCCCcHHHhhhcHHHHHHH-----HHHHHHhhhhHHHHHhhHHHHHHHhC
Q 009409 308 ---NMKKSLS----------ASLEEM-GESLKDVPWKAIFRSKAVWAMI-----YAHFCGSWGHYTCLSWLPTYFSEELS 368 (535)
Q Consensus 308 ---~~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----l~~~~~~~~~~~~~~~~p~~l~~~~g 368 (535)
+.-+... .+.++. .++.+..++.++++++....-. +...-...+.+.+..|...+++ ..|
T Consensus 223 ~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~-~aG 301 (485)
T KOG0569|consen 223 KALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFK-TAG 301 (485)
T ss_pred HHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHH-HcC
Confidence 1111110 011111 1122556788999886655432 2222233344556666666665 469
Q ss_pred CChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhh---hcCCC--cHH---HHH
Q 009409 369 LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS---IDLGL--PHW---EIV 440 (535)
Q Consensus 369 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~---~~~ 440 (535)
++..++.+.....++...+..+++.++.||+||| .+...+...+.+..+++. ...+. .+. .++
T Consensus 302 ~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR---------pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~ 372 (485)
T KOG0569|consen 302 FTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR---------PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIA 372 (485)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 9999999999999999999999999999999975 222333332222222111 11111 111 122
Q ss_pred HHHHHHHHHhh-hhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhh
Q 009409 441 GILTAGLALSS-FALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV 519 (535)
Q Consensus 441 ~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 519 (535)
+.+...++++. ..+.......+.++++.|+.+.++..++..+..++-...+-.+.+..|. ..|+...+.+++..+..
T Consensus 373 ~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i~~ 450 (485)
T KOG0569|consen 373 AIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLIYL 450 (485)
T ss_pred HHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHH
Confidence 33333333332 2444555567779999999999999999999999999999999999885 45666667777778888
Q ss_pred hhhccCCCCCCC
Q 009409 520 WLAFASSKPQNF 531 (535)
Q Consensus 520 ~~~~~~~~~~~~ 531 (535)
+...+++|.+..
T Consensus 451 ~~~lPETkgr~~ 462 (485)
T KOG0569|consen 451 YRYLPETKGRTP 462 (485)
T ss_pred HHhCcccCCCCH
Confidence 888888876543
No 96
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.93 E-value=7.3e-25 Score=193.59 Aligned_cols=362 Identities=14% Similarity=0.126 Sum_probs=252.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcc-cCCchhhHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSL 191 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~ 191 (535)
...+..+|+..|-+++.....+....++.++.+++.++..++.++|.....+.++++|++.|| +|.|..-++-+....+
T Consensus 43 ~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~ 122 (459)
T KOG4686|consen 43 FMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFL 122 (459)
T ss_pred HHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHH
Confidence 344555566666677777777777788899999999999999999999999999999999997 6877666555555566
Q ss_pred HHHHHHh--hhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchh
Q 009409 192 ATALLPL--LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (535)
Q Consensus 192 ~~~~~~~--~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (535)
+.++++. ..+.+|+++.+||+.|+|.-......+.+...||+.+|.+.++|+.....-+|+.+--.+.+++.+..+--
T Consensus 123 GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~ 202 (459)
T KOG4686|consen 123 GQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRM 202 (459)
T ss_pred HHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHh
Confidence 6655432 45778999999999999998888899999999999999999999999999999998888888877653210
Q ss_pred ------H---HHHHHHHH-HHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhh-hcHHH
Q 009409 270 ------S---VFYIFGLL-GIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIF-RSKAV 338 (535)
Q Consensus 270 ------~---~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 338 (535)
. .....+.. +...++....+--.+++..+. ..+++... .+..+ +.+.. -.|.+
T Consensus 203 ~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAeri-------lh~e~g~~------Ge~pk---Ltdv~~f~ppf 266 (459)
T KOG4686|consen 203 FPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERI-------LHLEEGFL------GEEPK---LTDVNTFYPPF 266 (459)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH-------HhhhcCcc------cCCcc---cccccccCccH
Confidence 0 01111111 111111111111000000000 00000000 00000 01111 24789
Q ss_pred HHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHH-HH
Q 009409 339 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT-IA 417 (535)
Q Consensus 339 ~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~-~~ 417 (535)
|.+.++.+++..+.+.+...-|.++++++|+|+..++.+.+.....+.+.+++.|.++||.|++-. ++.. ..
T Consensus 267 w~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~-------wv~~a~~ 339 (459)
T KOG4686|consen 267 WVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW-------WVASACI 339 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh-------hHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999997611 1111 11
Q ss_pred HHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcc
Q 009409 418 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 497 (535)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~ 497 (535)
..+.+-..+. +..-++ ...+.++|+......-..-..+...+|+++.|++.|+.+.+.++|-.+.|.++|.+.|.
T Consensus 340 ~tl~~H~~l~--Ft~lsP---y~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 340 LTLLGHSGLF--FTFLSP---YTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred HHHHHhhhHH--hhhccH---HHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 1111112221 111122 24455667666655554555566778999999999999999999999999999999998
Q ss_pred cCcch
Q 009409 498 THSWS 502 (535)
Q Consensus 498 ~g~~~ 502 (535)
-|+|.
T Consensus 415 ~g~y~ 419 (459)
T KOG4686|consen 415 DGSYD 419 (459)
T ss_pred CCchh
Confidence 87653
No 97
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=5e-23 Score=214.06 Aligned_cols=412 Identities=15% Similarity=0.084 Sum_probs=260.9
Q ss_pred CCcccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhh
Q 009409 93 GTEEVGRASYWPPWKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWL 172 (535)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l 172 (535)
.+.++.++.+|+.+++. ......+..........+..++..+ .+.++.+.....+..+++.+|..+|++++|++
T Consensus 68 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~l 141 (521)
T KOG0255|consen 68 PTLDPANPLNWPSWKKW----LLVIVICLDGWVYDYGSSVYSIVSE--WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPL 141 (521)
T ss_pred CccCcCCcccccccccc----ccccccccceeEecCCCCcccccch--hceeeCcHhHHHHHHHHHHHHHHHHHhhheeh
Confidence 44555666666665532 2111222222222223333333333 46677788899999999999999999999999
Q ss_pred hcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHH
Q 009409 173 AKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS 252 (535)
Q Consensus 173 ~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 252 (535)
+||+|||++++.+.++..++.++. .++++++.+++.|++.|++.++.......+++|++++++|+.+..+ ......++
T Consensus 142 sD~~GRk~~~~~~~~~~~i~~~~~-a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~ 219 (521)
T KOG0255|consen 142 SDRFGRKPVLLVSLLLFIIFGILT-AFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGG 219 (521)
T ss_pred HhhcccHHHHHHHHHHHHHHHHHH-HHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHH
Confidence 999999999999999999999666 5889999999999999999999999999999999999999999999 88888999
Q ss_pred HHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhh------hhhh---H------
Q 009409 253 VAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKS------LSAS---L------ 317 (535)
Q Consensus 253 ~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~------ 317 (535)
.+++..++++.. +|||.+++..+..++.++..++.+|.++....+.+.++.....++. .... .
T Consensus 220 ~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~ 297 (521)
T KOG0255|consen 220 LMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLL 297 (521)
T ss_pred HHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHh
Confidence 999999999887 8999999999998877777555557665433222222111111110 0000 0
Q ss_pred HH--hccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHH
Q 009409 318 EE--MGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQF 395 (535)
Q Consensus 318 ~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l 395 (535)
+. .....+...+..+++.|++....+...+.... +...++.-.+....+|.+... ...+.+.....+....+..
T Consensus 298 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~-~~~~y~gl~~~~~~lg~~~~~---~~~~~~~~~~p~~~~~~~~ 373 (521)
T KOG0255|consen 298 RPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFV-FSLVYYGLSLNVSGLGGNIYL---NFTLSGLVELPAYFRNGLL 373 (521)
T ss_pred hHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHH-HhHHHHhhhhhhhhcCchHHH---HHHHHHHHHhhHHHHHHHH
Confidence 00 00111224467778877544443333333322 222222222233344544433 3344444677777778899
Q ss_pred HHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcH--HHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHH
Q 009409 396 ADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH--WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL 473 (535)
Q Consensus 396 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 473 (535)
.|++|| +...........++++.......... .......+..++.+...........+.+|...|+.+.
T Consensus 374 ~~~~gR---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~ 444 (521)
T KOG0255|consen 374 LPEFGR---------RPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAV 444 (521)
T ss_pred HHHhCc---------HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 999864 34445555555555554444333222 2222222333333333444456667778999999999
Q ss_pred HHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhccCCCCC
Q 009409 474 GITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQ 529 (535)
Q Consensus 474 g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (535)
|..+....+|.+++|.+.-...... ....+.+.+.+..+.+.+..+..++++.+
T Consensus 445 ~~~~~~~~~~~i~ap~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~lpet~~~ 498 (521)
T KOG0255|consen 445 GAISAAARLGSILAPLFPLLLRQMF--PLLGLILFGWLALLLGLLSLLLLPETKGK 498 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc--ccchHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 9999999999999998876554432 22222223444445555554555544443
No 98
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.92 E-value=2.3e-22 Score=207.86 Aligned_cols=401 Identities=15% Similarity=0.126 Sum_probs=255.0
Q ss_pred HHHHHHHHHhh--hhhhHhhhhhhhccc-----CCCc--cchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHH
Q 009409 119 TSLAFVICNMD--KVNLSVAIIPMSHRF-----GWNS--SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (535)
Q Consensus 119 ~~~~~~~~~~~--~~~~~~~~~~~~~~~-----g~s~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (535)
..+..+..+.+ ....++....+.++. ..+. .+.+++.++..++..++++++|+++|++|||+.++++.+++
T Consensus 50 ~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~ 129 (513)
T KOG0254|consen 50 AALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLF 129 (513)
T ss_pred HHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 33444444443 344555555555532 2222 34589999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc-cch
Q 009409 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGW 268 (535)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw 268 (535)
.++.++.+ +++++.+++++|++.|+|.|........+++|..|++.||...+.......+|..++..++....+. .+|
T Consensus 130 ~iG~ii~~-~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~W 208 (513)
T KOG0254|consen 130 LIGAIIIA-LAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGW 208 (513)
T ss_pred HHHHHHHH-HhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccH
Confidence 99998875 7788999999999999999999999999999999999999999999999999999995555444332 489
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhh--hhhh---hhh--hHH--------HhccCCCCCcHHHhh
Q 009409 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYIN--MKKS---LSA--SLE--------EMGESLKDVPWKAIF 333 (535)
Q Consensus 269 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~--~~~--------~~~~~~~~~~~~~~~ 333 (535)
|..+.+..+.+++..+..+++||+++.--+.....+.... ..+. +.. +.+ +......+..+++++
T Consensus 209 r~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 288 (513)
T KOG0254|consen 209 RIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELF 288 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhc
Confidence 9999999998888877777788766543332222111110 0000 000 000 000011111233333
Q ss_pred h----cHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhH
Q 009409 334 R----SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMV 409 (535)
Q Consensus 334 ~----~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~ 409 (535)
+ ++.+....+..+....+.....+|.+.+++. .|.+... .......++..+++..+...+.||+|||
T Consensus 289 ~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr------- 359 (513)
T KOG0254|consen 289 SPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR------- 359 (513)
T ss_pred CcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH-------
Confidence 3 3344445566666666667778888988864 4666433 4455666777788888889999999864
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc----C-------CCcHHHHHHHHHHHHHHhhhhhhhh-hhhhhccCCcchhHHHHHHH
Q 009409 410 RKICQTIAFLSPAVCMTLSSID----L-------GLPHWEIVGILTAGLALSSFALSGL-YCTHQDISPEYASILLGITN 477 (535)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~ 477 (535)
.+...+...+.++..+.... . ....+.++..++.-..+.....+.. ....+.+|.+.|+.+.++..
T Consensus 360 --~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~ 437 (513)
T KOG0254|consen 360 --KLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAV 437 (513)
T ss_pred --HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHH
Confidence 33333333333333322211 0 1112222222222222222222222 24556688899999999999
Q ss_pred HhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH-hhhhhccCCCCCCCC
Q 009409 478 TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT-IVWLAFASSKPQNFS 532 (535)
Q Consensus 478 ~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 532 (535)
.+..+...+-....-.+.+..+ ....|...+....+... .++...+++|.++.+
T Consensus 438 ~~n~~~~~~v~~~~~~~~~~~~-~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sle 492 (513)
T KOG0254|consen 438 AVNWLWNFLISFFFPFITEALG-IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLE 492 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHHHHHHHheEEcccCCCCcHH
Confidence 9888877776666655655543 23344444444444444 566666777665543
No 99
>PTZ00207 hypothetical protein; Provisional
Probab=99.91 E-value=1.5e-21 Score=198.99 Aligned_cols=388 Identities=12% Similarity=0.067 Sum_probs=266.3
Q ss_pred hhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhh-----hh
Q 009409 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA-----GF 202 (535)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-----~~ 202 (535)
...+.++.+.|.+.+++|+|..+.+++.++. ..+.++++++|++.||+|+|+++.++.++++++.++.++.. .+
T Consensus 41 g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s 119 (591)
T PTZ00207 41 SFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS 119 (591)
T ss_pred HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc
Confidence 3445677778889999999999999998874 45567788899999999999999999999999998876531 46
Q ss_pred hhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHH
Q 009409 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (535)
Q Consensus 203 ~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~ 282 (535)
++.+++.|++.|+|.+...+.....+.+++| ++||+++|+...+.++|+++.+.+...+.. .+|++.|++.+++.++.
T Consensus 120 ~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 120 VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVV 197 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999997 889999999999999999864444443433 46899999988887665
Q ss_pred HHHhhhcccCCCCCC---CC--CCcchhhhhh----------------------------------------h--h----
Q 009409 283 FSGFKILQEGETSNG---AT--LAPRSNYINM----------------------------------------K--K---- 311 (535)
Q Consensus 283 ~~~~~~~~~~~~~~~---~~--~~~~~~~~~~----------------------------------------~--~---- 311 (535)
.++...+.++++... ++ .+++++..++ + +
T Consensus 198 ~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~ 277 (591)
T PTZ00207 198 GILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKV 277 (591)
T ss_pred HHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 544444333222111 00 0111110000 0 0
Q ss_pred -----hh---------------------h-h-hH------H--------Hh---ccCCC------CCcHHHhhhcHHHHH
Q 009409 312 -----SL---------------------S-A-SL------E--------EM---GESLK------DVPWKAIFRSKAVWA 340 (535)
Q Consensus 312 -----~~---------------------~-~-~~------~--------~~---~~~~~------~~~~~~~~~~~~~~~ 340 (535)
.. . + +. + +. ....+ ..++.+.+++..+|.
T Consensus 278 ~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wl 357 (591)
T PTZ00207 278 GFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWC 357 (591)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHH
Confidence 00 0 0 00 0 00 00001 125677888999999
Q ss_pred HHHHHHHHhhhhHHHHHhhHHHHHHHh-CCChhh--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHH
Q 009409 341 MIYAHFCGSWGHYTCLSWLPTYFSEEL-SLNLTE--AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 417 (535)
Q Consensus 341 ~~l~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~~--~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 417 (535)
+.+..++.......+...+.+..+ .+ |.+... ..++.++.++++.+|++..|.+.....+|+...+..|...+.+.
T Consensus 358 l~~~~~cg~g~gl~~~~N~~qI~~-sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~ 436 (591)
T PTZ00207 358 LLWSIFCCVGAHFVIIFNARFIYT-ALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIP 436 (591)
T ss_pred HHHHHHHhhCchheeeecHHHHHH-HhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHH
Confidence 999999998888888888888775 45 763322 33378999999999999999998444333322111233333333
Q ss_pred HHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHH-HHHHHHHhc
Q 009409 418 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVG-VALTGYLLD 496 (535)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig-p~i~G~l~~ 496 (535)
.+ +.+..+++....+. ..+.+..++.|++.+.........+.+.+. ++-|+-..+.....-+|..+- -.++|.++|
T Consensus 437 ~~-~~~~~lll~~~~p~-~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd 513 (591)
T PTZ00207 437 SV-CIITMLTLFLTLPK-AALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYT 513 (591)
T ss_pred HH-HHHHHHHHHHHCCc-cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 33 33333333332221 456778888899988877777777777777 888998888888888887776 568899997
Q ss_pred ccC----c--------chHHHHHHHHHHHHHHHhhhhh
Q 009409 497 STH----S--------WSMSLFAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 497 ~~g----~--------~~~~~~~~~~~~~~~~~~~~~~ 522 (535)
+-. + +...|++++++.+++.++....
T Consensus 514 ~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 514 QQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred HHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 531 1 5677888777777766665544
No 100
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.91 E-value=1.2e-20 Score=189.90 Aligned_cols=355 Identities=16% Similarity=0.113 Sum_probs=258.5
Q ss_pred hhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH-HHHHHHhh-hhhhhHHHHHHHHhhhccCCchhhHHHHh
Q 009409 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL-ATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLI 228 (535)
Q Consensus 151 ~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~~~~~~~G~~~~~~~~~~~~~~ 228 (535)
.++..++..+..++..|+.|.++|+-|+||.++....+.++ ++.++.+. .++++...++.++.-++.+.......+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46778888888999999999999999987777665554443 44444333 34445555556666677778888889999
Q ss_pred hhcccccch--------------------------hhHHHHHHHhhhhHHHHHhhhHHHhccc--------cchhHHHHH
Q 009409 229 ARSIPLEER--------------------------SRAVSFVFGGLSFGSVAGLLLAPPIIEN--------LGWESVFYI 274 (535)
Q Consensus 229 ~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~gw~~~f~~ 274 (535)
.+..+++++ ++..+.-.+.+++|+++.-++.-.+... .+.|..+.+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 999988888 9999999999999999888776655321 235888888
Q ss_pred HHHHHHHHHHH-hhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhH
Q 009409 275 FGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (535)
Q Consensus 275 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (535)
.++..++..+. ++++|+.++.+..+..... .+..+++- ...++++.|.|.+..++++.+++.-+..
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~----~~~g~~~l---------~~t~k~~~~~~~~~~fLia~~l~~dg~~ 298 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPGPRPLPSGSSY----LRFGFKRL---------WRTFKEIRKLRQLFLFLIAYFLYSDGVN 298 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcchhH----HHHHHHHH---------HHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 88876655444 4444544332211111110 00011000 1124677788999999999999999999
Q ss_pred HHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhh----
Q 009409 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS---- 429 (535)
Q Consensus 354 ~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 429 (535)
.+......|.++.+|++..+...+.....+.+++|.++.+++.||+|.|.. +.+.........+.+....
T Consensus 299 ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~------~~l~~~l~~~~~i~~~g~~G~~~ 372 (477)
T PF11700_consen 299 TIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK------RTLLISLILWIIIPLYGLFGFWP 372 (477)
T ss_pred HHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh------HHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999987511 1222221111122211111
Q ss_pred --hcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHH
Q 009409 430 --IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFA 507 (535)
Q Consensus 430 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~ 507 (535)
....+.+...+..++.|++.+........+..+..|+++.+..+|+++..+...+.+||.+.|.+.+.+|+.+..+..
T Consensus 373 ~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~ 452 (477)
T PF11700_consen 373 SFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLF 452 (477)
T ss_pred cccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 113445556666678899999999999999999999999999999999999999999999999999999989999988
Q ss_pred HHHHHHHHHHhhhhhcc
Q 009409 508 PSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 508 ~~~~~~~~~~~~~~~~~ 524 (535)
..++++++.++++....
T Consensus 453 l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 453 LLVLFLIGLILLFFVDV 469 (477)
T ss_pred HHHHHHHHHHHHhhccc
Confidence 77766666665544443
No 101
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.91 E-value=7.5e-21 Score=190.10 Aligned_cols=391 Identities=12% Similarity=0.098 Sum_probs=258.8
Q ss_pred HHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhc----ccCCchhhHHH-HHHHHH
Q 009409 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK----IFGGRKVLQTG-VLIWSL 191 (535)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~g~r~~~~~~-~~~~~~ 191 (535)
+.++...+-..+......+.++.+.+++|++....+++..+..+...+.+++.|+++| |+|||+.++.+ .....+
T Consensus 7 i~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~ 86 (477)
T TIGR01301 7 LRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAF 86 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHH
Confidence 3445555556677778888888888999999999999999999999999999999999 59999999876 444444
Q ss_pred HHHHHHhhhhhh-----------------hHHHHHHHHhhhccCCchhhHHHHhhhcccccch--hhHHHHHHHhhhhHH
Q 009409 192 ATALLPLLAGFM-----------------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER--SRAVSFVFGGLSFGS 252 (535)
Q Consensus 192 ~~~~~~~~~~~~-----------------~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~ 252 (535)
+.++++ .+++. ..++++-.+..++.....+...++++|..|+++| +.+.++.+...++|.
T Consensus 87 ~l~ll~-~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ 165 (477)
T TIGR01301 87 AVILIG-FAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGN 165 (477)
T ss_pred HHHHHH-hCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHH
Confidence 444443 33332 1223333344557777888889999999998755 689999999999999
Q ss_pred HHHhhhHHHh--cccc-------------chhHHHHHHHHHHHHHHH-HhhhcccCCCCCCCCCCcchhhhhhhhhhhhh
Q 009409 253 VAGLLLAPPI--IENL-------------GWESVFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSAS 316 (535)
Q Consensus 253 ~~g~~~~~~l--~~~~-------------gw~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (535)
++|+.++++. .+.+ +.|+.|++.+++.++..+ ..+..+|.+....++..+ ++..
T Consensus 166 ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~-~~~~--------- 235 (477)
T TIGR01301 166 VLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFIN-SEAA--------- 235 (477)
T ss_pred HHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchh-hhcc---------
Confidence 9999999875 2211 578999998877665544 444555544322111000 0000
Q ss_pred HHHhccCCCCCcHHHhhh-----cHHHHHHHHHHHHHhhhhHHHHHhhHHHHH-HHhCCChhh----------HHHHHhh
Q 009409 317 LEEMGESLKDVPWKAIFR-----SKAVWAMIYAHFCGSWGHYTCLSWLPTYFS-EELSLNLTE----------AAWVSIL 380 (535)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~-~~~g~s~~~----------~g~~~~~ 380 (535)
+.++......++++++ .+.++.+++..++..++++.+..|...|+. +.|+-++.. ..+....
T Consensus 236 --~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~ 313 (477)
T TIGR01301 236 --PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLML 313 (477)
T ss_pred --cccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHH
Confidence 0000000112333333 367889999999999999999999999986 455543211 1223344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCC----------------C----cHHHHH
Q 009409 381 PPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG----------------L----PHWEIV 440 (535)
Q Consensus 381 ~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~----~~~~~~ 440 (535)
..+...+.+++..++.+|+|.| +..-.++.++.++++....+... . ....++
T Consensus 314 ~s~~~~i~s~~l~~l~~~~g~~--------k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 385 (477)
T TIGR01301 314 NSVVLGITSIGMEKLCRGWGAG--------KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALI 385 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhccc--------hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHH
Confidence 4555556666777888887642 12222332223333222211010 0 144455
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhccCC--cchhHHHHHHHHhhhhhhhHHHHHHHHHhcccC-cchHHHHHHHHHHHHHHH
Q 009409 441 GILTAGLALSSFALSGLYCTHQDISP--EYASILLGITNTVGAVPGIVGVALTGYLLDSTH-SWSMSLFAPSIFFYLTGT 517 (535)
Q Consensus 441 ~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g-~~~~~~~~~~~~~~~~~~ 517 (535)
.+...|+..+.........+.+..++ +..|..+|+.|.+..+..++.....|.+.+..| +...++.+.++..+++++
T Consensus 386 ~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~ 465 (477)
T TIGR01301 386 VFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGL 465 (477)
T ss_pred HHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHH
Confidence 56667888777777777777777774 556999999999999999999999998777766 356667777777777777
Q ss_pred hhhhhccCCCC
Q 009409 518 IVWLAFASSKP 528 (535)
Q Consensus 518 ~~~~~~~~~~~ 528 (535)
+.+...+|.++
T Consensus 466 ~~~~~~~~~~~ 476 (477)
T TIGR01301 466 LALILLPRPRV 476 (477)
T ss_pred HHHHhCCCCCC
Confidence 77777766553
No 102
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.90 E-value=2e-20 Score=187.80 Aligned_cols=395 Identities=13% Similarity=0.084 Sum_probs=237.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhccc-CCchhhHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSL 191 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 191 (535)
+-+..++...+...+..+.....+|. +.+++|++..+.+.+.+.+.....++++++|+++||+ |||++++++.++.++
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 44444555555566666667777776 4567899999999999999999999999999999999 999999999999888
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhccccc--chhhHHHHHHHhhhhHHHHHhhhHHHhccccchh
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 269 (535)
+.+++.....+...+.+...+.++|.+...+...++++|.+|++ +|..++++.+...++|+.++|.+.+++.+..||+
T Consensus 89 g~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~ 168 (493)
T PRK15462 89 GHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWA 168 (493)
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChH
Confidence 87665422222223444444555666667777788999999875 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCC---CCCCCcchhhhh---------------hh-hhhhhhHHH-----------
Q 009409 270 SVFYIFGLLGIAWFSGFKILQEGETSN---GATLAPRSNYIN---------------MK-KSLSASLEE----------- 319 (535)
Q Consensus 270 ~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---------------~~-~~~~~~~~~----------- 319 (535)
+.|.+.++..++.++.++...+...+. +++..++++... .. .........
T Consensus 169 ~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (493)
T PRK15462 169 MGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGL 248 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999987665444333333222111110 011110000000 00 000000000
Q ss_pred -----hccCCCCCcHHHhhhcHH--HHHHHHHHHHHhhhhHHHHHhhHHHHHHHh-----CCChhhHHHHHhhHHHHHHH
Q 009409 320 -----MGESLKDVPWKAIFRSKA--VWAMIYAHFCGSWGHYTCLSWLPTYFSEEL-----SLNLTEAAWVSILPPLASVL 387 (535)
Q Consensus 320 -----~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~-----g~s~~~~g~~~~~~~~~~~~ 387 (535)
... ++. .+.-|+|. +..+.+...+....+....+.+..|..+.- |+. ....+..++..+..++
T Consensus 249 ~~~~~~~~--~~~--~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~ 323 (493)
T PRK15462 249 GVLAKIYR--KAE--NQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVML 323 (493)
T ss_pred HHHHHHHH--hcC--CHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHH
Confidence 000 000 00012221 122223333333333444455555554432 322 1234556777777788
Q ss_pred HHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhh--h---c---CCCcHHHHHHHHHHHHHHhhhhhhhhhh
Q 009409 388 VTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS--I---D---LGLPHWEIVGILTAGLALSSFALSGLYC 459 (535)
Q Consensus 388 ~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 459 (535)
..++.+++-.|..+++..+....|. .++++..+++++... . . ..+..|++...++..++--+..+.....
T Consensus 324 l~P~~a~lw~~l~~~~~~~s~~~Kf--a~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~ 401 (493)
T PRK15462 324 CGVFLAWVVKESVAGNRTVRIWGKF--ALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQ 401 (493)
T ss_pred HHHHHHHHHHHHhcCCCCCCcHHHH--HHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHH
Confidence 8888888777775443333323333 334443333332221 1 1 1245677777788888888889999998
Q ss_pred hhhccCCcchhHHHHHHHHhh-hhhhhHHHHHHHHHhcc-----------cCcchHHHHHHHHHHHHH
Q 009409 460 THQDISPEYASILLGITNTVG-AVPGIVGVALTGYLLDS-----------THSWSMSLFAPSIFFYLT 515 (535)
Q Consensus 460 ~~~~~~~~~~g~~~g~~~~~~-~lg~~igp~i~G~l~~~-----------~g~~~~~~~~~~~~~~~~ 515 (535)
+.+..|++.+|..+|+..... .+|..++..+.+...+. ...|...|...+...+++
T Consensus 402 ~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 402 ITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 999889999999999986533 45555555555444211 013455666666544444
No 103
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=2.9e-23 Score=196.38 Aligned_cols=405 Identities=19% Similarity=0.184 Sum_probs=276.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhccc--------CCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRF--------GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT 184 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 184 (535)
.+.+.+....+|....|...++...|.+...+ +++....+.+..+..+|.++||+++|++.||+|||+++..
T Consensus 40 fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~ 119 (538)
T KOG0252|consen 40 FKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGK 119 (538)
T ss_pred HHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhH
Confidence 45666677778888888888888777655443 1456677889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhh-------hhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhh
Q 009409 185 GVLIWSLATALLPLLAG-------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (535)
Q Consensus 185 ~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 257 (535)
.++++.+++++.+ ++. -..++...|++.|+|.|+-+|...++.+|...++.||..++...+....|...|.+
T Consensus 120 ~liImIi~t~~~~-~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~i 198 (538)
T KOG0252|consen 120 ELIIMIICSALSG-LSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGI 198 (538)
T ss_pred HHHHHHHHHHHhc-cCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccH
Confidence 9999999997554 331 14578899999999999999999999999999999999999999888888888877
Q ss_pred hHHHhccc---------------cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCc-chhhhhhhhhh----hhhH
Q 009409 258 LAPPIIEN---------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAP-RSNYINMKKSL----SASL 317 (535)
Q Consensus 258 ~~~~l~~~---------------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~ 317 (535)
++-.+... .=||..|.+.++.+++.+..-+.+||+++.......+ +....+.++.. .++.
T Consensus 199 vt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~ 278 (538)
T KOG0252|consen 199 VALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAES 278 (538)
T ss_pred HHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhh
Confidence 76655421 1299999998888888888888888887654111111 00000000000 0000
Q ss_pred H-HhccCCC---CCcHHHhhhc---HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHH--------HHhhH-
Q 009409 318 E-EMGESLK---DVPWKAIFRS---KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW--------VSILP- 381 (535)
Q Consensus 318 ~-~~~~~~~---~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~--------~~~~~- 381 (535)
. +...+.. ...|...+.. +.++.....+|+...++|....+....++. .|+.+...-. ...+.
T Consensus 279 ~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia 357 (538)
T KOG0252|consen 279 TAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIA 357 (538)
T ss_pred ccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHH
Confidence 0 0000001 1113333333 355566788899999999999888888863 4665444332 11111
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCc--HHHHHHHHHHHHHHhhhhhhhhh-
Q 009409 382 PLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP--HWEIVGILTAGLALSSFALSGLY- 458 (535)
Q Consensus 382 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~- 458 (535)
..+.++|..+...++|++|+ +.+.+.++.+..+..+......+.. ....+.+..+..+++.+.+....
T Consensus 358 ~~~~vPGyw~tv~~id~iGR---------k~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttf 428 (538)
T KOG0252|consen 358 VCSTVPGYWFTVYFIDIIGR---------KYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTF 428 (538)
T ss_pred HHccCCceeEEEEEeehhhh---------HHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeE
Confidence 22223355556678999984 4677777777777666555433311 11112222333344445554443
Q ss_pred -hhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhc-----ccCcchHHHHHHHHHHHHHHHhhhhhccCCCCCC
Q 009409 459 -CTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD-----STHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN 530 (535)
Q Consensus 459 -~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (535)
..++.+|...|++..|+...++-+|+++|...++++.+ .. +...++++.+.+..+..+..+++. ++|.++
T Consensus 429 ivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~-g~~~v~~i~~~~~~~gi~~T~l~p-Etk~~~ 504 (538)
T KOG0252|consen 429 IVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNI-GVRNVFIILAGCMLLGILFTLLIP-ETKGKS 504 (538)
T ss_pred EeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccc-cchHHHHHHHHHHHHhHheeEEee-cccccC
Confidence 34566888999999999999999999999999999999 54 478888888887766666555554 555544
No 104
>PRK09669 putative symporter YagG; Provisional
Probab=99.90 E-value=1.2e-20 Score=192.07 Aligned_cols=341 Identities=12% Similarity=0.036 Sum_probs=218.9
Q ss_pred HHhhhhhhHhh-hhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcc----cCCc-hhhHHHHHHHHHHHHHHHhh
Q 009409 126 CNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGR-KVLQTGVLIWSLATALLPLL 199 (535)
Q Consensus 126 ~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~g~r-~~~~~~~~~~~~~~~~~~~~ 199 (535)
..+....++.+ .+.+.+.+|++..++|.+.++.-+..++..|+.|+++|| +||| +.++.+.+..+++..+.. .
T Consensus 21 ~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f-~ 99 (444)
T PRK09669 21 CNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTF-Y 99 (444)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHH-h
Confidence 33334444544 444788899999999999999999999999999999999 7774 555566666666654432 2
Q ss_pred hhh------hhHHHHHHHHhhhccCCchhhHHHHhhhcc-cccchhhHHHHHHHhhhhHHHHHhhhHHHhcc-------c
Q 009409 200 AGF------MPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------N 265 (535)
Q Consensus 200 ~~~------~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~ 265 (535)
.++ ...+++..++.+.+.+.......++.+|+. ++++|.+..++......+|..+++.+...+.. .
T Consensus 100 ~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~ 179 (444)
T PRK09669 100 TPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQ 179 (444)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh
Confidence 321 344555566667776677777788888987 56889998888888888888877765544332 2
Q ss_pred cchhHHHHHHHHHHHHHHHHhhh-cccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHH
Q 009409 266 LGWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYA 344 (535)
Q Consensus 266 ~gw~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 344 (535)
.+|+..+.+.+++.++..+..++ .+|+.+++ ++ ++. .....++.++|||.++.+.+.
T Consensus 180 ~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~-~~--~~~-------------------~~~~~~~~~~~n~~~~~l~~~ 237 (444)
T PRK09669 180 KGYFYAMMVMGLLGVVLFFCCFFMTKERYTPE-VD--NSS-------------------SVWKDLKLLLGNSQWRIMFIF 237 (444)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCeEEecCCC-Cc--CCC-------------------CHHHHHHHHhCCchHHHHHHH
Confidence 47888888888776655444333 33321111 00 000 001124678899999888877
Q ss_pred HHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHH-H
Q 009409 345 HFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA-V 423 (535)
Q Consensus 345 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~ 423 (535)
.++............+.|.+...+ +....+.+.....+..+++.++.+++.||+|+| +.. ..+.+... .
T Consensus 238 ~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-------~~~--~~~~~~~~~~ 307 (444)
T PRK09669 238 NVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-------RAF--KWTIVAFVIL 307 (444)
T ss_pred HHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------HHH--HHHHHHHHHH
Confidence 776666655444444444443333 333344455555677788888999999999865 212 22222222 1
Q ss_pred HHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccC-------CcchhHHHHHHHHhhhhhhhHHHHHHHHHhc
Q 009409 424 CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGYLLD 496 (535)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 496 (535)
.+.+.....++....++..++.+++.+...+.......+.++ .+..|...|..+.+..+|..+|+.++|.+.+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 308 SALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred HHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222223333344555566677766666555555554443 3446788999999999999999999999998
Q ss_pred ccC
Q 009409 497 STH 499 (535)
Q Consensus 497 ~~g 499 (535)
..|
T Consensus 388 ~~G 390 (444)
T PRK09669 388 WVD 390 (444)
T ss_pred HcC
Confidence 764
No 105
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.90 E-value=1.1e-21 Score=199.55 Aligned_cols=370 Identities=12% Similarity=0.044 Sum_probs=241.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhh-hhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccC-----CchhhHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-----GRKVLQTGVL 187 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g-----~r~~~~~~~~ 187 (535)
..+.++...++.+++. ...... .|.+.+++|++.++++...++..++..+-.+ +|+++||++ ||+.++++.+
T Consensus 26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGL 103 (468)
T ss_pred hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHH
Confidence 4455666677888888 554444 5557778999999999999999999988666 999999997 7777777766
Q ss_pred HHH-HHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhh---HHHHHHHhhhhHHHHHhhhHHHhc
Q 009409 188 IWS-LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR---AVSFVFGGLSFGSVAGLLLAPPII 263 (535)
Q Consensus 188 ~~~-~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~---~~~~~~~~~~~g~~~g~~~~~~l~ 263 (535)
+.+ ++...++...++.....+..++.+++.+...+...+++.|..+ +++.. ..+......++|.++|+.++|.+.
T Consensus 104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 652 3322222112333344458899999999999999999999998 55544 334444455689999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHH
Q 009409 264 ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 343 (535)
Q Consensus 264 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (535)
+.++|+..|++.+++.++..+...+++|+++....+..+++.... ........+...+. .....+.+++|.++...+
T Consensus 183 ~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~~~l~~~~i~~~l~ 259 (468)
T TIGR00788 183 DKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNM-ALLTLGVLANVKVQ--ILGLRGAIQLLEIAKPLI 259 (468)
T ss_pred HhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhh-hhhhhhHHHHHHHH--HHHHHHHHhcHHHHHHHH
Confidence 999999999999888877766667777753211111000000000 00000000000000 011345577888887665
Q ss_pred HHHH-HhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHH
Q 009409 344 AHFC-GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA 422 (535)
Q Consensus 344 ~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 422 (535)
..++ +.........+. .+.++.+|+++...|++....+++.+++..+.+++.+|++.| ....++.++.+
T Consensus 260 fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r---------~~l~~~~~l~~ 329 (468)
T TIGR00788 260 FIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR---------LLFGVTTLLYT 329 (468)
T ss_pred HHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH---------HHHHHHHHHHH
Confidence 5555 222211111111 022346799999999999999999999888888887777643 22333333333
Q ss_pred HHHHHhh-h----c----CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHH
Q 009409 423 VCMTLSS-I----D----LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGY 493 (535)
Q Consensus 423 ~~~~~~~-~----~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~ 493 (535)
+...... . . .....+.....++.+++.+....+....+.+..|++.+|+.+|+.+++.++|..+++.++|.
T Consensus 330 ~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~ 409 (468)
T TIGR00788 330 LSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVL 409 (468)
T ss_pred HHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHH
Confidence 3221111 0 0 01222333344556666666677777888888999999999999999999999999999999
Q ss_pred HhcccC
Q 009409 494 LLDSTH 499 (535)
Q Consensus 494 l~~~~g 499 (535)
+.+..|
T Consensus 410 l~~~~g 415 (468)
T TIGR00788 410 LMETIG 415 (468)
T ss_pred HHHHcC
Confidence 999875
No 106
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.89 E-value=1.8e-20 Score=180.30 Aligned_cols=279 Identities=13% Similarity=0.079 Sum_probs=204.7
Q ss_pred hhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc-------------
Q 009409 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN------------- 265 (535)
Q Consensus 199 ~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------------- 265 (535)
..++++.+++.-++.|.|.+...+..+.++++..+++++++.+++.+..+++|..++|++++.+...
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4567799999999999999999999999999999999999999999999999999999999987732
Q ss_pred ---cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHH
Q 009409 266 ---LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMI 342 (535)
Q Consensus 266 ---~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (535)
..|+++|++.+++.++..+.+.+.+.++.+++.. ++... ++. ...+..+++|.++...
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~--~~~~~--------------~~~---~~~~~~~~~~~~~l~~ 146 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV--ARVSS--------------GDT---TQKTSAFQFTHLVLGA 146 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc--ccccc--------------ccc---cchhhHHhhHHHHHHH
Confidence 4799999988777655555555543332211100 00000 000 0113467788888888
Q ss_pred HHHHHHhhhhHHHHHhhHHHHHHH--hCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHH
Q 009409 343 YAHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS 420 (535)
Q Consensus 343 l~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 420 (535)
+..+++.....++..|++.|+.+. +|+++.+.+...+....+.++|+++.+++.||++.+ +.+ ..+.++
T Consensus 147 ~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~--------~~l-~~~~~l 217 (310)
T TIGR01272 147 LGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG--------RYL-AFNAFL 217 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--------HHH-HHHHHH
Confidence 888888889999999999999754 699999999999999999999999999999999865 222 222333
Q ss_pred HHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCc
Q 009409 421 PAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS 500 (535)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~ 500 (535)
..+...+..... ........++.|++.+...+.......+..+ ++.+++.++. .++.+|++++|.+.|.+.|..|
T Consensus 218 ~~~~~~l~~~~~--~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g- 292 (310)
T TIGR01272 218 AVLLSIGAALTH--GYVAMWFVLALGLFNSIMFPTIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLG- 292 (310)
T ss_pred HHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-
Confidence 333332222222 2333445566788888777777776666554 4566777775 5678999999999999999885
Q ss_pred chHHHHHHHH
Q 009409 501 WSMSLFAPSI 510 (535)
Q Consensus 501 ~~~~~~~~~~ 510 (535)
...+|++..+
T Consensus 293 ~~~a~~v~~~ 302 (310)
T TIGR01272 293 IQLAFALPVP 302 (310)
T ss_pred chHHHHHHHH
Confidence 7777765443
No 107
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.88 E-value=2e-26 Score=235.66 Aligned_cols=399 Identities=18% Similarity=0.212 Sum_probs=259.7
Q ss_pred HHHHHHHhhhhhhHhhhhhhh--cccCCCc---------cchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHH
Q 009409 121 LAFVICNMDKVNLSVAIIPMS--HRFGWNS---------SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (535)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~--~~~g~s~---------~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (535)
++.+..+++...++...+... ..++.+. .+.+++.+...++..+|.+++|.++||+|||+.+.++.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 344666666666655544433 2232222 24688999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhh---hhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc
Q 009409 190 SLATALLPLLAG---FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (535)
Q Consensus 190 ~~~~~~~~~~~~---~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (535)
.++.++.+ +++ +++.+.++|++.|++.|...+....++.|..|++.|++..++......+|.+++..++..+....
T Consensus 87 ~i~~~~~~-~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 87 IIGSILIA-FAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99998775 666 78999999999999999999999999999999999999999999999999999988876654433
Q ss_pred ---chhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhh-----hhhhhHHHh----ccC-CCCCcHHHhh
Q 009409 267 ---GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK-----SLSASLEEM----GES-LKDVPWKAIF 333 (535)
Q Consensus 267 ---gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~----~~~-~~~~~~~~~~ 333 (535)
+||+.+++.++..++.++...++||.++.-..+.+.++.....++ ....+.++. ++. ..+..+++++
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLF 245 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeecc
Confidence 499999999998888777888889887654332222221111111 000000110 000 0113456666
Q ss_pred hcHH----HHHHHHHHHHH-hhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchh
Q 009409 334 RSKA----VWAMIYAHFCG-SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM 408 (535)
Q Consensus 334 ~~~~----~~~~~l~~~~~-~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 408 (535)
+++. +.......++. ..+.+....+.|.+++ ..|.+.. -.......+...++.++...+.||+|||+.
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~---- 318 (451)
T PF00083_consen 246 RNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE-NAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKL---- 318 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc-ccccccc--cccccccccccccccccccccccccccccc----
Confidence 6643 22222222222 2233345556666664 4566655 223344556666777777899999997632
Q ss_pred HHHHHHHHHHHHHHHHHHHh----hhcCCC----cHHHHHHHHHHHHHHh-hhhhhhhhhhhhccCCcchhHHHHHHHHh
Q 009409 409 VRKICQTIAFLSPAVCMTLS----SIDLGL----PHWEIVGILTAGLALS-SFALSGLYCTHQDISPEYASILLGITNTV 479 (535)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 479 (535)
...+....+++.... ...... ..+.++...+...... +..+....+..+.+|.+.|+++.|+...+
T Consensus 319 -----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~ 393 (451)
T PF00083_consen 319 -----LIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAV 393 (451)
T ss_pred -----cccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccc
Confidence 222222222222222 111221 1222222222211222 22333334557778999999999999999
Q ss_pred hhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhccCCCCCCCCC
Q 009409 480 GAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFST 533 (535)
Q Consensus 480 ~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (535)
+.++++++|.+...+.+..+ ....+.+.+++.++..+..+.+.+++|.++.++
T Consensus 394 ~~i~~~i~~~~~~~~~~~~~-~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~e 446 (451)
T PF00083_consen 394 GRIGGFIIPFLFPYLFNNLG-GWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEE 446 (451)
T ss_pred cccccccccccccccccccc-ccccchhhHHHHHHHHhheeEEEeeCCCCCHHH
Confidence 99999999999988888764 344555556666777777788888888876543
No 108
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.87 E-value=1.1e-19 Score=186.15 Aligned_cols=351 Identities=11% Similarity=0.043 Sum_probs=225.7
Q ss_pred HHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhc----ccCC-chhhHHHHHHHHHHHH
Q 009409 121 LAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK----IFGG-RKVLQTGVLIWSLATA 194 (535)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~g~-r~~~~~~~~~~~~~~~ 194 (535)
+..+...+....+.++++. +.+.+|++...+|.+..+.-+..++..|+.|.++| |+|| |+.++.+....+++..
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence 4444455555666666555 66778999999999999999999999999999999 5698 5566667777666654
Q ss_pred HHHhhhhh------hhHHHHHHHHhhhccCCchhhHHHHhhhcc-cccchhhHHHHHHHhhhhHHHHHhhhHHHhcc---
Q 009409 195 LLPLLAGF------MPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE--- 264 (535)
Q Consensus 195 ~~~~~~~~------~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--- 264 (535)
++ +..++ +..+++..++.+++.+...+...++..|.. +++||.+..++...+.++|..+.+.+...+.+
T Consensus 93 ll-f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g 171 (473)
T PRK10429 93 LL-FSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG 171 (473)
T ss_pred HH-HcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44 33221 234555666777888888888889999988 58999999998777777776666555443322
Q ss_pred ----ccchhHHHHHHHHHHHHHHHHhh-hcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHH
Q 009409 265 ----NLGWESVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVW 339 (535)
Q Consensus 265 ----~~gw~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (535)
..+|++..++.+++.++..+..+ ..+|+++....+..++++ ...+..++.+++||.++
T Consensus 172 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~n~~~~ 234 (473)
T PRK10429 172 GGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSH-----------------LTLKDIVALIYKNDQLS 234 (473)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccC-----------------CCHHHHHHHHhcCHHHH
Confidence 23577777777666655443333 344432111100000000 00011245667899998
Q ss_pred HHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 009409 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (535)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 419 (535)
.+++..++.....+....+.+.|++.. ..+....+.+.....++.+++.++.+++.||+|+| +.. ..+.+
T Consensus 235 ~ll~~~~~~~~~~~~~~~~~~y~~~y~-~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-------~~~--~~~~~ 304 (473)
T PRK10429 235 CLLGMALAYNIASNIINGFAIYYFTYV-IGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-------ILW--AGASI 304 (473)
T ss_pred HHHHHHHHHHHHHHHHhhheeeEEEEE-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-------HHH--HHHHH
Confidence 888888888877777777777666533 33555666677777788899999999999999875 222 22222
Q ss_pred HHHHHHHH-hh---hcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccC-------CcchhHHHHHHHHhhhhhhhHHH
Q 009409 420 SPAVCMTL-SS---IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGV 488 (535)
Q Consensus 420 ~~~~~~~~-~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~lg~~igp 488 (535)
+..+..+. .. ...++.+..++..++.+++.+...........+.++ .+..|..+|..+.+..+|..+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~ 384 (473)
T PRK10429 305 FPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAA 384 (473)
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHH
Confidence 21211111 11 112223333444455566666555554445554433 34467799999999999999999
Q ss_pred HHHHHHhcccC
Q 009409 489 ALTGYLLDSTH 499 (535)
Q Consensus 489 ~i~G~l~~~~g 499 (535)
.+.|.+.+..|
T Consensus 385 ~i~g~~l~~~G 395 (473)
T PRK10429 385 FFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHcC
Confidence 99999987654
No 109
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.87 E-value=2.5e-20 Score=176.99 Aligned_cols=398 Identities=14% Similarity=0.129 Sum_probs=279.7
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHH
Q 009409 105 PWKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT 184 (535)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 184 (535)
..|..++||.+++.+++..+.+.+.+..+++......+.+| +....-|...+|.+.+....+++-|+.||+|-|...++
T Consensus 36 ~~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 36 GHRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 44566778888888888888888888888887777777788 88888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh-----hhhh--HHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhh
Q 009409 185 GVLIWSLATALLPLLA-----GFMP--GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (535)
Q Consensus 185 ~~~~~~~~~~~~~~~~-----~~~~--~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 257 (535)
+..+.+++..+-.... +.++ ....+..+.+.+.........-+...||++++|..+..+-.++..+|.++|.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 9999999987764332 2233 56688888888888777777788889999999999999999999999999999
Q ss_pred hHHHhcccc------chhH--HHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcH
Q 009409 258 LAPPIIENL------GWES--VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPW 329 (535)
Q Consensus 258 ~~~~l~~~~------gw~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (535)
+...+..+. .|.. .|+..+++..+.++...+...++++.+......... +..-....
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------------~~~f~~si 259 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------------DASFPKSI 259 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------------cCcHHHHH
Confidence 988887543 3554 344444444333333333222222111111100000 00012235
Q ss_pred HHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhH
Q 009409 330 KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMV 409 (535)
Q Consensus 330 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~ 409 (535)
++.++|+++..+.+.+.+....+++..+.+-.-+. .-|++...+|....+..+++++++.+.|.+.||.++-
T Consensus 260 ~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~-~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f------- 331 (480)
T KOG2563|consen 260 KSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALC-PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF------- 331 (480)
T ss_pred HHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccc-cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH-------
Confidence 78899999999988888888888888777775564 3478878899999999999999999999999998542
Q ss_pred HHHHHHHHHHHHHHH-HHHh--hhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhH
Q 009409 410 RKICQTIAFLSPAVC-MTLS--SIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIV 486 (535)
Q Consensus 410 ~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i 486 (535)
+.... +......+. +.+. .......++.+..+.++|.+.....+...-...+...|..-++..|+.+..+++-+++
T Consensus 332 k~~~~-v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~ 410 (480)
T KOG2563|consen 332 KLTTL-VLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVI 410 (480)
T ss_pred HHHHH-HHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHH
Confidence 22222 222222222 2222 2223344555566667777777777766666667778888999999999999999999
Q ss_pred HHHHHHHHhcccC----cchHHHHHHHHHHHHHHHhhhhhccCCCC
Q 009409 487 GVALTGYLLDSTH----SWSMSLFAPSIFFYLTGTIVWLAFASSKP 528 (535)
Q Consensus 487 gp~i~G~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (535)
-..+.+...+..+ .+... +.+...+++...++.+++...++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 411 LVFIMGILAEDLGPPGNTFPAN-IFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred HHHHHHHHhhccCCCCCCccch-hHhHHHHHHHHHHHhhhhhhHHh
Confidence 9999999998775 23222 33333344445555555443333
No 110
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.87 E-value=6.5e-20 Score=185.84 Aligned_cols=345 Identities=18% Similarity=0.188 Sum_probs=247.6
Q ss_pred HHhhhhhhHhh-hhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhc----ccCCchhhH-HHHHHHHHHHHHHHhh
Q 009409 126 CNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK----IFGGRKVLQ-TGVLIWSLATALLPLL 199 (535)
Q Consensus 126 ~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~g~r~~~~-~~~~~~~~~~~~~~~~ 199 (535)
..+..+..+.+ .+.+.+.+|+++..+|.+..+..+..++..|+.|.++| |+||||.++ ++....+++..++...
T Consensus 13 ~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~ 92 (428)
T PF13347_consen 13 YNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSP 92 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhcc
Confidence 33344444444 55577888999999999999999999999999999999 799766555 6767777776665322
Q ss_pred hh-------hhhHHHHHHHHhhhccCCchhhHHHHhhhccc-ccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc-----
Q 009409 200 AG-------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL----- 266 (535)
Q Consensus 200 ~~-------~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----- 266 (535)
.+ ....+.+..++..++.........++..|..+ +++|.+..+....+..+|.++...+.+.+.+..
T Consensus 93 ~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~ 172 (428)
T PF13347_consen 93 PPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDT 172 (428)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcc
Confidence 12 12235677777799999999999999999996 578999999999988888876666666655322
Q ss_pred --chhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHH
Q 009409 267 --GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYA 344 (535)
Q Consensus 267 --gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 344 (535)
+|++..++.+++.++..+...+..++++.+..+..+ +..-...++.+++||.++.+.+.
T Consensus 173 ~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~-------------------~~~~~~~~~~~~~nr~~~~l~~~ 233 (428)
T PF13347_consen 173 SNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEK-------------------KISLRDSLRSLFRNRPFRILLLA 233 (428)
T ss_pred chHHHHHHHHHHHHHHHHhhhhhheeeecccccccccc-------------------ccccccchhhhcccchHHHHHHH
Confidence 699999998888776655444443321111110000 01112346788999999999999
Q ss_pred HHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHH
Q 009409 345 HFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVC 424 (535)
Q Consensus 345 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (535)
.++...+........+.|.+...|.+ ...+.+.....++.+++.++.++++||+|+|+. ...+.+..++.
T Consensus 234 ~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~---------~~~~~~~~~~~ 303 (428)
T PF13347_consen 234 FFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV---------YIIGLLLAALG 303 (428)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee---------hhhhHHHHHHH
Confidence 99988888888888898888877777 456667778889999999999999999987632 22333333333
Q ss_pred HHHhhhcC-CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccC-------CcchhHHHHHHHHhhhhhhhHHHHHHHHHhc
Q 009409 425 MTLSSIDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGYLLD 496 (535)
Q Consensus 425 ~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 496 (535)
..+..+.. ++..+.++..++.|++.+...........+..+ +++.|...|+.+....++..+++.+.|.+.+
T Consensus 304 ~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 304 FLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 33322222 556667777777888777766555555554433 4557999999999999999999999999987
Q ss_pred ccC
Q 009409 497 STH 499 (535)
Q Consensus 497 ~~g 499 (535)
..|
T Consensus 384 ~~G 386 (428)
T PF13347_consen 384 LVG 386 (428)
T ss_pred HhC
Confidence 654
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.86 E-value=6.2e-19 Score=179.90 Aligned_cols=347 Identities=11% Similarity=0.038 Sum_probs=211.7
Q ss_pred HHHHHHHhhhhhhHhhh-hhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhccc----CCchhh-HHHHHHHHHHHH
Q 009409 121 LAFVICNMDKVNLSVAI-IPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF----GGRKVL-QTGVLIWSLATA 194 (535)
Q Consensus 121 ~~~~~~~~~~~~~~~~~-~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~----g~r~~~-~~~~~~~~~~~~ 194 (535)
+..+...+......+++ +.+.+.+|++..++|.+.++..+..++..+++|+++||. |||+.+ ..+.+...+...
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 34444444554554443 457777899999999999999999999999999999996 666644 555554444443
Q ss_pred HHHhhh----h--hhhHHHHHHHHhhhccCCchhhHHHHhhhcc-cccchhhHHHHHHHh-----hhhHHHHHhhhHHHh
Q 009409 195 LLPLLA----G--FMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGG-----LSFGSVAGLLLAPPI 262 (535)
Q Consensus 195 ~~~~~~----~--~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~-----~~~g~~~g~~~~~~l 262 (535)
+..... . .....++..++.+++.+...+...++..+.. ++++|.+..++...+ ..++..++|.+++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 95 LVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 321111 1 1122344556677777777777777666655 446788877665543 335555666666543
Q ss_pred cccc--chhHHHHHHHHHHHHHH-HHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHH
Q 009409 263 IENL--GWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVW 339 (535)
Q Consensus 263 ~~~~--gw~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (535)
.... +|.....+.+++.++.. +.....+|+.+++.++ . .....++.+++||.++
T Consensus 175 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~--~---------------------~~~~~~~~l~~n~~f~ 231 (448)
T PRK09848 175 PEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQ--P---------------------SLKISLQTLKRNRPLF 231 (448)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccC--C---------------------CHHHHHHHHhCCchHH
Confidence 2111 12111122222222222 2222233322111000 0 0011256788999999
Q ss_pred HHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 009409 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (535)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 419 (535)
...+..++...+........|.|+++.+|.+....++......++.+++.++.+++.||+++| ....++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~---------~~~~~g~~ 302 (448)
T PRK09848 232 MLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK---------NTFLIGAL 302 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHH
Confidence 988888888888888888888888888888776666555555667788899999999999864 22223333
Q ss_pred HHHHHHHHhhhcCCCcH-HHHHHHHHHHHHHhhhhhhhhhhhhhccCC-------cchhHHHHHHHHhhhhhhhHHHHHH
Q 009409 420 SPAVCMTLSSIDLGLPH-WEIVGILTAGLALSSFALSGLYCTHQDISP-------EYASILLGITNTVGAVPGIVGVALT 491 (535)
Q Consensus 420 ~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~lg~~igp~i~ 491 (535)
+..+............. ..++..++.+++.+...+.......+..+. ++.|...|+.+....+|..+|+.+.
T Consensus 303 ~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~ 382 (448)
T PRK09848 303 LGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIP 382 (448)
T ss_pred HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333222222223 333445556666665555555555444443 3469999999999999999999999
Q ss_pred HHHhcccC
Q 009409 492 GYLLDSTH 499 (535)
Q Consensus 492 G~l~~~~g 499 (535)
|.+.+..|
T Consensus 383 g~~l~~~G 390 (448)
T PRK09848 383 AFILGLSG 390 (448)
T ss_pred HHHHHHcC
Confidence 99987654
No 112
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.85 E-value=1.2e-18 Score=164.82 Aligned_cols=352 Identities=15% Similarity=0.083 Sum_probs=257.3
Q ss_pred ccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH-HHHHHHhhhh--hhhHHHHHHHHhhhccCCchhhH
Q 009409 148 SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL-ATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAA 224 (535)
Q Consensus 148 ~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~~~~~~~G~~~~~~~~~~ 224 (535)
.+..+...++..+..++..++.|.++|+.|+||.........++ +..++.+..+ +++..++...+..++........
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 34567788888888899999999999999977766655444444 4444444444 45566777788888888889999
Q ss_pred HHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhH--HHhc----------------cccchhHHHHHHHHHHHHHHHHh
Q 009409 225 TDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA--PPII----------------ENLGWESVFYIFGLLGIAWFSGF 286 (535)
Q Consensus 225 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~----------------~~~gw~~~f~~~~~~~~~~~~~~ 286 (535)
.+++.+..++++-++..++-.....+|+.+--++. +.+. +...-|..+.+.++..++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 99999999999989998888888888877765553 1111 22357888888888777666555
Q ss_pred hhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHH
Q 009409 287 KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE 366 (535)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~ 366 (535)
++..++.+.... ...+ . ..+.. ++. ...++++.+++.+..+.++.+++.-+..++..+...|-.+.
T Consensus 217 ~~~v~~~~~~~~-~~~~--~--l~~g~----k~L-----~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~ 282 (438)
T COG2270 217 ILNVHDAEKISS-PPPT--A--LRNGF----KEL-----KSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAAD 282 (438)
T ss_pred Hhcccccccccc-cchH--H--HHHHH----HHH-----HHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 554443332210 0000 0 00000 000 12357778888999999999999999999999999999989
Q ss_pred hCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHH
Q 009409 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAG 446 (535)
Q Consensus 367 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 446 (535)
+|++..+..++.....+.+++|+++.|++.||++.|.. +....++....++..... ....-.++..+++|
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~v--------l~~~lvi~~~~~~~~~~~--~~~~~f~i~gll~g 352 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPV--------LMIGLVILSIAALYLIFL--EGELDFWILGLLVG 352 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcee--------ehHHHHHHHHHHHHHHHc--cccHHHHHHHHHHH
Confidence 99999999999999999999999999999999987622 222222223333333332 22344445556788
Q ss_pred HHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhc
Q 009409 447 LALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 523 (535)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 523 (535)
.+.+........+..+.+|+++.++.+|+++..+......||.+.+.+.+.+|+.+..+....++.++..++++...
T Consensus 353 ~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~ 429 (438)
T COG2270 353 TSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVK 429 (438)
T ss_pred HhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeec
Confidence 88899999999999999999999999999999999999999999999999999988888877765555554444433
No 113
>PRK11462 putative transporter; Provisional
Probab=99.83 E-value=5.7e-17 Score=165.07 Aligned_cols=344 Identities=13% Similarity=0.046 Sum_probs=213.0
Q ss_pred HHHHHHhhhhhhHhhhh-hhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcc----cCCchh-hHHHHHHHHHHHHH
Q 009409 122 AFVICNMDKVNLSVAII-PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKV-LQTGVLIWSLATAL 195 (535)
Q Consensus 122 ~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~g~r~~-~~~~~~~~~~~~~~ 195 (535)
..+...+....++.++. .+.+..|+++..+|.+..+.-+.-++..|+.|.++|| +||||. ++++.+.++++..+
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~l 96 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVL 96 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHH
Confidence 33333444445555444 4778889999999999999999999999999999996 687655 45565666666655
Q ss_pred HHhhhhh------hhHHHHHHHHhhhccCCchhhHHHHhhhccc-ccchhhHHHHHHHhhhhHHHHHhhhHHHhccc---
Q 009409 196 LPLLAGF------MPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--- 265 (535)
Q Consensus 196 ~~~~~~~------~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--- 265 (535)
+ +..+. ...+++..++..++.........++.++..+ ++||.+..++...+..+|..+++.+...+.+.
T Consensus 97 l-f~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~ 175 (460)
T PRK11462 97 A-YSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGG 175 (460)
T ss_pred H-HhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4 33321 2335556666788888888888888888885 79999999999999999988887776555433
Q ss_pred ----cchhHHHHHHHHHHHHHHHHhhh-cccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHH
Q 009409 266 ----LGWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWA 340 (535)
Q Consensus 266 ----~gw~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (535)
.+|+....+.+++.+++..+.+. .+|.++. +. ++.. . +..++..++||.++.
T Consensus 176 ~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~-~~---~~~~---~----------------~~~l~~~~~Nk~~~~ 232 (460)
T PRK11462 176 DNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEA-PP---TTTS---M----------------REDLRDIWQNDQWRI 232 (460)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCC-Cc---cCCC---H----------------HHHHHHHhCChHHHH
Confidence 25777777777766555443333 2222111 10 0000 0 012457788888877
Q ss_pred HHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHH
Q 009409 341 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS 420 (535)
Q Consensus 341 ~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 420 (535)
+....++..............|.+..+|. +...+.+.....++.+++.+++++++||+++| + .........
T Consensus 233 l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk-------~-~~~~~~~~~ 303 (460)
T PRK11462 233 VGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV-------T-IFWWTNALL 303 (460)
T ss_pred HHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------H-HHHHHHHHH
Confidence 76666666555555545555455433443 33445566677788889999999999999764 2 211111211
Q ss_pred HHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccC-------CcchhHHHHHHHHhhhhhhhHHHHHHHH
Q 009409 421 PAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGY 493 (535)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~lg~~igp~i~G~ 493 (535)
....+.+......+....++..++.+++.+...........+..+ .+..|...+..+....+|..+++.+.|.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~ 383 (460)
T PRK11462 304 AVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGW 383 (460)
T ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 121222222222222223333344454443333222223333222 3344666788889999999999999999
Q ss_pred Hhccc
Q 009409 494 LLDST 498 (535)
Q Consensus 494 l~~~~ 498 (535)
+++..
T Consensus 384 iL~~~ 388 (460)
T PRK11462 384 MLAYG 388 (460)
T ss_pred HHHHc
Confidence 98764
No 114
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.81 E-value=1.6e-17 Score=169.35 Aligned_cols=288 Identities=16% Similarity=0.192 Sum_probs=226.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
..+.++++..+.+.+....+...+..+.+.|+++.++.|++.+.+-++..+...+..+..-|.-|-+++-++.+++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 45667777788888888778888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhh----------------------------------------------------hhHHHHHHHHhhhccCCch
Q 009409 194 ALLPLLAGF----------------------------------------------------MPGLVLSRVLVGIGEGVSP 221 (535)
Q Consensus 194 ~~~~~~~~~----------------------------------------------------~~~l~~~~~~~G~~~~~~~ 221 (535)
++.++- +. +..++++.++.|+|....+
T Consensus 177 ll~alP-Hf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~ 255 (735)
T KOG3626|consen 177 LLFALP-HFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIF 255 (735)
T ss_pred HHHhCh-HHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCc
Confidence 887532 11 1147788999999999999
Q ss_pred hhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc-------------------chhHHHHHHHHHHHHH
Q 009409 222 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-------------------GWESVFYIFGLLGIAW 282 (535)
Q Consensus 222 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------------------gw~~~f~~~~~~~~~~ 282 (535)
+...+|+-|...+++-+..+|+......+|+++|-++++++...+ -|...|++.+.+.++.
T Consensus 256 tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 256 TLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred cCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999886421 2777888888888888
Q ss_pred HHHhhhcccCCCCCCCCCCcchhhhhhhhhh-hhhHHHhccCCC--CCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhh
Q 009409 283 FSGFKILQEGETSNGATLAPRSNYINMKKSL-SASLEEMGESLK--DVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 359 (535)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 359 (535)
.+.++++|.+.+...++...++....+.+.. ........+..+ ....+++++||.+....+...+....+.++.+|+
T Consensus 336 a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFl 415 (735)
T KOG3626|consen 336 AVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFL 415 (735)
T ss_pred HHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhh
Confidence 8888888887665443211111100000000 000000000001 1235788999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhHHHHHhhHHHH-HHHHHHHHHHHHHHHHHc
Q 009409 360 PTYFSEELSLNLTEAAWVSILPPLA-SVLVTSIAAQFADNLIAT 402 (535)
Q Consensus 360 p~~l~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~dr~~~~ 402 (535)
|.|++.+||.++..+..+.....+. ..+|.+++|++..|+.-+
T Consensus 416 PKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 416 PKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 9999999999999999888666664 457888899999998543
No 115
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.81 E-value=8.1e-17 Score=156.06 Aligned_cols=386 Identities=16% Similarity=0.196 Sum_probs=241.6
Q ss_pred hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcc-cCCchhhHHHHHHHHHHHHHHHhhh-hhhhHHHHHHHHhhhcc
Q 009409 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLATALLPLLA-GFMPGLVLSRVLVGIGE 217 (535)
Q Consensus 140 ~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~G~~~ 217 (535)
+.+.+|++++++.-+.+.|..---+.++++|+++|| +|+|+++..+.+++.++.++++..+ .....+++..++.++|.
T Consensus 52 ~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~ 131 (498)
T COG3104 52 LGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGT 131 (498)
T ss_pred ccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcc
Confidence 344455999999888888887777899999999999 5999999999999999998886543 45678999999999999
Q ss_pred CCchhhHHHHhhhccccc--chhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhcccCCCC
Q 009409 218 GVSPSAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETS 295 (535)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 295 (535)
|..-+...++++|.+|++ +|-..+++++++.++|+.++|++.+++.++.||...|-+.++-..+.++.+...++.-..
T Consensus 132 Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 132 GLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred ccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence 999999999999999753 377889999999999999999999999999999999999988877766666655432221
Q ss_pred CCC----CCCcchhhhhh-h----hhhhhh--HHHhccCCC-----------CCcHHHhh------hc-HHHHH---HHH
Q 009409 296 NGA----TLAPRSNYINM-K----KSLSAS--LEEMGESLK-----------DVPWKAIF------RS-KAVWA---MIY 343 (535)
Q Consensus 296 ~~~----~~~~~~~~~~~-~----~~~~~~--~~~~~~~~~-----------~~~~~~~~------~~-~~~~~---~~l 343 (535)
... ........... . ...... .....+... ...+.+.+ .+ ++.+. +.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl 291 (498)
T COG3104 212 IGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFL 291 (498)
T ss_pred CCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHH
Confidence 111 11110000000 0 000000 000000000 00000000 11 12222 222
Q ss_pred HHHHHhhhhHHHHHhhHHHHHHH-----hCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHH
Q 009409 344 AHFCGSWGHYTCLSWLPTYFSEE-----LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 418 (535)
Q Consensus 344 ~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 418 (535)
...++...+....+.+..|..+. +|++ ....+.-++..+.-++..++..++..|.++++..+....|.......
T Consensus 292 ~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l 370 (498)
T COG3104 292 FAVIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLIL 370 (498)
T ss_pred HHHHHHHHHHhccchHHHHHHHhhccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHH
Confidence 22222222222233344444322 2221 12334557777777888888889988877766544433443333333
Q ss_pred HHHHHHHHHhh---h----cCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHH
Q 009409 419 LSPAVCMTLSS---I----DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT 491 (535)
Q Consensus 419 ~~~~~~~~~~~---~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~ 491 (535)
..+...++... . ...+..|.+...++..++--+..+.....+.+..|+...+.++|+.......|..++..+.
T Consensus 371 ~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va 450 (498)
T COG3104 371 AGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVA 450 (498)
T ss_pred HHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceec
Confidence 32222222222 1 1124567777788888888888999999999989998888888887766666666666555
Q ss_pred HH------HhcccCcchHHHHHHHHHHHHHHHhhhhhccCCC
Q 009409 492 GY------LLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 527 (535)
Q Consensus 492 G~------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (535)
+. ..+.. .....|...+....+....++...++.+
T Consensus 451 ~~~~~~~~~~~~~-~~~~~F~~~g~v~i~~~~~~~~~~~~~~ 491 (498)
T COG3104 451 GLTAVTDPAYTAF-IEGRVFGTIGVVAIVIGILLLLLSPKLN 491 (498)
T ss_pred ccccccchhhhhh-hhhhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 52 22332 3556676666666666665555544433
No 116
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.79 E-value=8.6e-16 Score=146.25 Aligned_cols=353 Identities=18% Similarity=0.172 Sum_probs=244.8
Q ss_pred hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccC-----CchhhHHHHH-HHHHHHHHHHh----hhh--------
Q 009409 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-----GRKVLQTGVL-IWSLATALLPL----LAG-------- 201 (535)
Q Consensus 140 ~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g-----~r~~~~~~~~-~~~~~~~~~~~----~~~-------- 201 (535)
+..|++++....+.+.++.++.. ...+.+|+.+|+.+ ||..+++... +.+.+..+... .+.
T Consensus 6 MIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 56788999999999999988775 56899999999998 7777765443 33333322211 122
Q ss_pred hhh---HHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHH---H
Q 009409 202 FMP---GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI---F 275 (535)
Q Consensus 202 ~~~---~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~---~ 275 (535)
.+. ...+...+.|+|.+...+...++++|..++++|+++.++...+.-+|.+++..+.+.+.+.+.-.-..-+ .
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 111 3445567889999999999999999999999999999999999999999999999999887663322222 2
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHH
Q 009409 276 GLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (535)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (535)
+++.++..++..+=.|++.++.....++++. .-...++++..+|+...+.+..++...+++.=
T Consensus 165 a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~-----------------~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~Q 227 (403)
T PF03209_consen 165 ALIALLLNLIALWGQEPRRSRRAAAAERPRP-----------------PFREAWRQVWASPQARRFFVFLFLGTLAFFMQ 227 (403)
T ss_pred HHHHHHHHHHHHHhcccCCcccccCCCCCCc-----------------cHHHHHHHHHhCCChhHHHHHHHHHHHHHHhh
Confidence 2222222222222223222222211111100 00123567778898888888888888888887
Q ss_pred HHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCc
Q 009409 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP 435 (535)
Q Consensus 356 ~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (535)
...+-.|--+.+|+++.+...+......+..+|..+.|++..|- ..+.+..+. .......+..++......++.
T Consensus 228 D~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~----~~~~~~a~~--G~~~~~~~f~lii~a~~~~~~ 301 (403)
T PF03209_consen 228 DVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRR----LGKKRTAAL--GCLLGALAFALIILAGPLGSP 301 (403)
T ss_pred HHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCchHHHHH--HHHHHHHHHHHHHHHHhcccc
Confidence 88888888899999999999999999999999999999877642 222211222 111122222223333334566
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhccc----C-----cchHHHH
Q 009409 436 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST----H-----SWSMSLF 506 (535)
Q Consensus 436 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~----g-----~~~~~~~ 506 (535)
+......+++|++.+.+.........+...+++.|..+|.....+.++..++..++|.+.|.. + .|..+|.
T Consensus 302 ~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~ 381 (403)
T PF03209_consen 302 WLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFA 381 (403)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHH
Confidence 777788899999999999998888888888999999999999999999999999999888742 2 2555665
Q ss_pred HHHHHHHHHH
Q 009409 507 APSIFFYLTG 516 (535)
Q Consensus 507 ~~~~~~~~~~ 516 (535)
+=++.++++.
T Consensus 382 lEa~ll~~a~ 391 (403)
T PF03209_consen 382 LEAVLLLAAL 391 (403)
T ss_pred HHHHHHHHHH
Confidence 5555444433
No 117
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.78 E-value=1.9e-20 Score=191.16 Aligned_cols=379 Identities=17% Similarity=0.229 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHH
Q 009409 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (535)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (535)
++.+++..+.+.+........+..+++.|+++.++.|++.+.+-++..+..++..++.+|..|-+++-++.+++++++++
T Consensus 5 l~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 5 LVFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHH
Confidence 34455556666566666677788999999999999999999999999999999999999998989999999999998877
Q ss_pred HHhhhhh--------------------------------------------------hhHHHHHHHHhhhccCCchhhHH
Q 009409 196 LPLLAGF--------------------------------------------------MPGLVLSRVLVGIGEGVSPSAAT 225 (535)
Q Consensus 196 ~~~~~~~--------------------------------------------------~~~l~~~~~~~G~~~~~~~~~~~ 225 (535)
+++ .+. +..++++.++.|+|.+..++...
T Consensus 85 ~~l-Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~ 163 (539)
T PF03137_consen 85 FAL-PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGI 163 (539)
T ss_dssp --------------------------------------------------------------------SSS---------
T ss_pred Hhc-cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcccee
Confidence 642 111 13478889999999999999999
Q ss_pred HHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc---------------------cc-hhHHHHHHHHHHHHHH
Q 009409 226 DLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN---------------------LG-WESVFYIFGLLGIAWF 283 (535)
Q Consensus 226 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---------------------~g-w~~~f~~~~~~~~~~~ 283 (535)
+|+-|..++++-+..+|+..+...+|+++|-++++.+... .| |-..|++.+++.++..
T Consensus 164 tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~a 243 (539)
T PF03137_consen 164 TYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSA 243 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999877642 12 6667777777777777
Q ss_pred HHhhhcccCCCCCCCCCCcchhhh-hhhhhhhhh-HHHh-----ccCCC--CCcHHHhhhcHHHHHHHHHHHHHhhhhHH
Q 009409 284 SGFKILQEGETSNGATLAPRSNYI-NMKKSLSAS-LEEM-----GESLK--DVPWKAIFRSKAVWAMIYAHFCGSWGHYT 354 (535)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~-----~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (535)
+..+.+|+.-+...+...+++... +.++...+. .++. .+..+ ....+++++||.+....+...+......+
T Consensus 244 ipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G 323 (539)
T PF03137_consen 244 IPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSG 323 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 777777776554411111111000 000000000 0000 01111 23457899999999999999999999999
Q ss_pred HHHhhHHHHHHHhCCChhhHHHHHhhHHH-HHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhh---
Q 009409 355 CLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI--- 430 (535)
Q Consensus 355 ~~~~~p~~l~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 430 (535)
+.+++|.|++.+++.++.++.++.....+ ++++|.+++|++.+|++-+.... .+......++........+..
T Consensus 324 ~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~---~~~~~v~~~v~~~~~~~~~~~~C~ 400 (539)
T PF03137_consen 324 FATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGA---AKFCIVVSIVSVILYSPLFFLGCP 400 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHH---HHHHHHHHHHHHHHHHHHHeecCC
Confidence 99999999999999999999988766655 66688899999999986542211 122222222211110000000
Q ss_pred -------cCCC--------------------------------------cHHHH-HHHHHHHHHHhhhhhhhhhhhhhcc
Q 009409 431 -------DLGL--------------------------------------PHWEI-VGILTAGLALSSFALSGLYCTHQDI 464 (535)
Q Consensus 431 -------~~~~--------------------------------------~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~ 464 (535)
..+. ....+ +.+++..+..+....+......+.+
T Consensus 401 ~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V 480 (539)
T PF03137_consen 401 NPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCV 480 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccC
Confidence 0000 00111 1112222233333445555667789
Q ss_pred CCcchhHHHHHHHHhh-hhhhhHHHHHHHHHhccc
Q 009409 465 SPEYASILLGITNTVG-AVPGIVGVALTGYLLDST 498 (535)
Q Consensus 465 ~~~~~g~~~g~~~~~~-~lg~~igp~i~G~l~~~~ 498 (535)
++++|+.+.|+...+. -+|.+-||+++|.+.|..
T Consensus 481 ~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 481 PPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp -----------------------------------
T ss_pred ChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 9999999999988665 558899999999999964
No 118
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.77 E-value=1.9e-15 Score=148.07 Aligned_cols=353 Identities=14% Similarity=0.128 Sum_probs=245.1
Q ss_pred HHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcc----cCC-chhhHHHHHHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGG-RKVLQTGVLIWSL 191 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~g~-r~~~~~~~~~~~~ 191 (535)
.-.+..+...........++.. +.+.+|+++..+|.+..+.-+--++..|+.|.++|| +|| |+.++.+.+-+++
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i 95 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAI 95 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHH
Confidence 3344555555566666666555 778899999999999999999999999999999996 666 4556666677777
Q ss_pred HHHHHHhhhhh------hhHHHHHHHHhhhccCCchhhHHHHhhhcc-cccchhhHHHHHHHhhhhHHHHHhhhHHHhcc
Q 009409 192 ATALLPLLAGF------MPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (535)
Q Consensus 192 ~~~~~~~~~~~------~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (535)
.+.++ +.+++ ..-.++...+.+++.+....+..++.+++. +++||.+..++...+..+|..+...+.+.+..
T Consensus 96 ~~~l~-F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~ 174 (467)
T COG2211 96 VAVLL-FITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVK 174 (467)
T ss_pred HHHHH-HcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77665 34442 345677788899999999888899998888 46999999999999999997777666655543
Q ss_pred -------ccchhHHHHHHHHHHHHHHHHhhh-cccCCCCCCCCCC-cchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhc
Q 009409 265 -------NLGWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLA-PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRS 335 (535)
Q Consensus 265 -------~~gw~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (535)
..||+..-++.+++..+..+..++ .+|...+...... .+.+ .+..+..+++|
T Consensus 175 ~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~-------------------~~~~~~~~~~N 235 (467)
T COG2211 175 LFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLK-------------------LKDSFLLIFKN 235 (467)
T ss_pred HhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccccccc-------------------HHHHHHHHHcc
Confidence 347888888877777665544443 3333321111110 0000 01113467899
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHH
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 415 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 415 (535)
|++...++..++...+..........|.+..+|.+.............+.+++.++..++.+|+|+| ....
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk---------~~~~ 306 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK---------KLFL 306 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH---------HHHH
Confidence 9999988888888888887888888888777788888887777777777778899999999999875 3333
Q ss_pred HHHHHHHHHHHHhhhcC-CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhc-------cCCcchhHHHHHHHHhhhhhhhHH
Q 009409 416 IAFLSPAVCMTLSSIDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQD-------ISPEYASILLGITNTVGAVPGIVG 487 (535)
Q Consensus 416 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~g~~~g~~~~~~~lg~~ig 487 (535)
.+.++..+......+.. ++..+.++..++.+++.+...+..-....+. ...+..|...|.+.++.-+|.+++
T Consensus 307 ~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala 386 (467)
T COG2211 307 IGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALA 386 (467)
T ss_pred HHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHH
Confidence 44444444433333333 3334444444555555554444333333322 244567999999999999999999
Q ss_pred HHHHHHHhcccC
Q 009409 488 VALTGYLLDSTH 499 (535)
Q Consensus 488 p~i~G~l~~~~g 499 (535)
..+.|++.+..|
T Consensus 387 ~~~~g~~L~~~G 398 (467)
T COG2211 387 GFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHcC
Confidence 999999998765
No 119
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.75 E-value=3.2e-16 Score=153.72 Aligned_cols=392 Identities=16% Similarity=0.146 Sum_probs=236.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcc--cCCCccchhHHHHHHHHHHHhhhccchhhhcccCC-chhhHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHR--FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQTGVLIW 189 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~ 189 (535)
||.+.+..+..|+..+..+++.+..-.+.++ .+.+.+..|++.++..++.+++.++.|+...|.+. |+.++.+.++.
T Consensus 33 wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~ 112 (488)
T KOG2325|consen 33 WRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIA 112 (488)
T ss_pred hHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHH
Confidence 4777777788888888888877775555555 77888999999999999999999999999999986 88888888888
Q ss_pred HHHHHHHHhh---hh-hhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc
Q 009409 190 SLATALLPLL---AG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (535)
Q Consensus 190 ~~~~~~~~~~---~~-~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (535)
.++.++.... .+ .-+.++++|++.|+|.+.. ...-+|+++....++|.++++....+..+|.++||.+...+...
T Consensus 113 ~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~L 191 (488)
T KOG2325|consen 113 IIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPL 191 (488)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhh
Confidence 8888776322 23 4578999999999997765 46678888888778999999999998888888888887766531
Q ss_pred --cc-----------hhHHHHHHHHHHHHHHH-HhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHH
Q 009409 266 --LG-----------WESVFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKA 331 (535)
Q Consensus 266 --~g-----------w~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (535)
.| +..+-|+.+++.++.++ +..++.|.......+..+.++. .....+ +.+..+
T Consensus 192 g~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~------~~~~~~--~~~~~~----- 258 (488)
T KOG2325|consen 192 GEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEE------EKSDIE--KVKKPK----- 258 (488)
T ss_pred cCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchh------hccchh--hhccCC-----
Confidence 11 34556667766665544 4444555443332221111100 000000 000000
Q ss_pred hhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHH----hhHHHHHHHHHHHHHHHHHHHHHcCCCch
Q 009409 332 IFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS----ILPPLASVLVTSIAAQFADNLIATGVETT 407 (535)
Q Consensus 332 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~----~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 407 (535)
+.....+.+.+..+..........+..+.+....++.+..++-... +..++...... .....-|+++- ..
T Consensus 259 -~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~--l~~~f~~l~~i--~~- 332 (488)
T KOG2325|consen 259 -LDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILL--LLYIFTRLGKI--DK- 332 (488)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHH--HHHHHHHhhhh--cc-
Confidence 0112334445555555555555566666666667777655554333 33222222222 22333333320 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHh--hhcCCC-c--------------------------HHHHH--HHHHHHHHHhhhhhhh
Q 009409 408 MVRKICQTIAFLSPAVCMTLS--SIDLGL-P--------------------------HWEIV--GILTAGLALSSFALSG 456 (535)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~--------------------------~~~~~--~~~~~g~~~~~~~~~~ 456 (535)
|+. +..+++....+..+. ...... + .+.+. ..+++|.+.-......
T Consensus 333 --r~~-~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~ 409 (488)
T KOG2325|consen 333 --RRI-ILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTAL 409 (488)
T ss_pred --cee-eeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchH
Confidence 111 112212222221111 110000 0 00001 1122233322223335
Q ss_pred hhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhccCCCC
Q 009409 457 LYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKP 528 (535)
Q Consensus 457 ~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (535)
.+...+...|.+++++.|++...+..+..++|.+...+....| +...+.+..+.+++...+.....++.++
T Consensus 410 ~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~~~~l~~~~~~r~~~ 480 (488)
T KOG2325|consen 410 DTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG-PRPVWIILLCLLLVVAALWIVFLKRLVP 480 (488)
T ss_pred HHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC-ccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5566677899999999999999999999999999999999885 7777766666555555554444444433
No 120
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.63 E-value=1.1e-13 Score=138.05 Aligned_cols=362 Identities=17% Similarity=0.133 Sum_probs=233.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCcc-chhHHHHHH----HHHHHhhhccchhhhcccCCchhhHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSS-VAGLVQSSF----FWGYALSQLPGGWLAKIFGGRKVLQTGVL 187 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~~~~~s~~----~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 187 (535)
+.......+-.|..++......+..+.....++.+.. ..+...... .+...+..+..|.++||+|||..+....+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 4556666666666666666666666666666554322 223333333 56777889999999999999999999988
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHHhhhcc--CCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc
Q 009409 188 IWSLATALLPLLAGFMPGLVLSRVLVGIGE--GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (535)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~--~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 265 (535)
...+..+... +.. +|.++ +.|+.. +.......++++|....++|...+|+.+.....+..++|.+++++.+.
T Consensus 101 ~~~l~~~~~~-~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~ 174 (463)
T KOG2816|consen 101 GTILPALCLL-FQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF 174 (463)
T ss_pred HHHHhHHHHH-HHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 8777765553 333 23333 444433 355677888999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHH-HhhhcccCCCCCCCCC-CcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHH
Q 009409 266 LGWESVFYIFGLLGIAWFS-GFKILQEGETSNGATL-APRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 343 (535)
Q Consensus 266 ~gw~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (535)
.|.-.+|++..+..++..+ ...++||+..++.+.. ..++......... +..+... .....-.+|..+.+.+
T Consensus 175 ~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~r~~l~l~l 247 (463)
T KOG2816|consen 175 LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSS-----HVADAFQ--SLTKVGPDRLLLLLLL 247 (463)
T ss_pred cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccch-----hhhhhhh--hhcccCCCccchHHHH
Confidence 9999999998888766554 4445555544333321 1100000000000 0000000 0011112344555444
Q ss_pred HHHHHhhhhHHHHH-hhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHH-HHHHHHHHcCCCchhHHHHHHHHHHHHH
Q 009409 344 AHFCGSWGHYTCLS-WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA-QFADNLIATGVETTMVRKICQTIAFLSP 421 (535)
Q Consensus 344 ~~~~~~~~~~~~~~-~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g-~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 421 (535)
..++.......-.. .++.|+...++++..+.+.+.+..+....++..+.. .+...++.+ ....++...-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~---------~~i~lGl~~~ 318 (463)
T KOG2816|consen 248 VAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK---------RLISLGLLSE 318 (463)
T ss_pred HHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------hHhhHHHHHH
Confidence 44444333332212 446778888999999999999999999999888877 566666644 2444555555
Q ss_pred HHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhccc
Q 009409 422 AVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 498 (535)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~ 498 (535)
.+....+.+.. ..+..+...+. ........+.........++++++|++.++...+..+...++|.+.+.++..+
T Consensus 319 ~~~~~~~af~~-~~w~~~~~~v~-~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 319 FLQLLLFAFAT-ETWMMFAAGVV-VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HHHHHHHHHhc-cchhhhHHHHH-HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 55555544432 22333333333 33334456666667777789999999999999999999999999999887543
No 121
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.58 E-value=7.8e-14 Score=140.27 Aligned_cols=348 Identities=16% Similarity=0.144 Sum_probs=215.1
Q ss_pred HhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccC-----CchhhHHHHHHHHHHHHHHHhhhh---hhhH
Q 009409 134 SVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-----GRKVLQTGVLIWSLATALLPLLAG---FMPG 205 (535)
Q Consensus 134 ~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g-----~r~~~~~~~~~~~~~~~~~~~~~~---~~~~ 205 (535)
....|.+.+++|+++.+...+.++..+...+ .++.|.++|-+. ||+.++++.++..++.+.++.... +...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 4446678899999999999988888888754 678899999863 555556666665444444443333 4566
Q ss_pred HHHHHHHhhhccCCchhhHHHHhhhccc--ccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHH
Q 009409 206 LVLSRVLVGIGEGVSPSAATDLIARSIP--LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (535)
Q Consensus 206 l~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~ 283 (535)
..++.++..+|.+.......+.+.|... ++++|...+.......+|.+++..++|.+.+..++++.|.+.+++..+..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 7777888899999999999999999883 34578889999999999999999999999999999999999988877766
Q ss_pred HHhhhcccCCCCCCCCCC---cchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHH-HHHHHhhhhHHHHHhh
Q 009409 284 SGFKILQEGETSNGATLA---PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY-AHFCGSWGHYTCLSWL 359 (535)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~ 359 (535)
+..+++.++++....... .++.........++. ...+.+.++.+.+|...+ ..++............
T Consensus 169 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ 239 (433)
T PF03092_consen 169 IVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQ---------LSELWRALQQRAIWQPILFFIFFFNLPPSISSASS 239 (433)
T ss_pred HHHHHhhhhccccccchhhcccccccchhhHHHHHH---------HHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccE
Confidence 555555554221111100 000000000000000 112356677787777665 3333222211110100
Q ss_pred HHHHHHHhC---CChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHh-hhc----
Q 009409 360 PTYFSEELS---LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-SID---- 431 (535)
Q Consensus 360 p~~l~~~~g---~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---- 431 (535)
-.+..+..+ +++...+.+..+..++.++|..+..+ +..++. .|+......++.....+.-. ...
T Consensus 240 fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~----~~~~~~----~R~~~~~t~~~~~~~~l~~~~lv~~~n~ 311 (433)
T PF03092_consen 240 FYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRK----YFSNWS----WRRIFVVTTLVSVLASLFDLLLVTRWNL 311 (433)
T ss_pred EEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHH----HHhCCC----HHHHHHHHHHHHHHHhcccEEEEEEEee
Confidence 001122345 88888887776666666665555444 333221 24443333333222222111 110
Q ss_pred ---CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccC
Q 009409 432 ---LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH 499 (535)
Q Consensus 432 ---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 499 (535)
.++.+..+.-.++..........+......+..|+...|+.+++..++.++|..++..++..+.+..+
T Consensus 312 ~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 312 DLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred eeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 01111112222334444444556666778888999999999999999999999999999999988765
No 122
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.56 E-value=9.4e-15 Score=138.48 Aligned_cols=188 Identities=18% Similarity=0.118 Sum_probs=152.9
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhccc--CC
Q 009409 102 YWPPWKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GG 178 (535)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--g~ 178 (535)
.|+...+.--+.+.+.++++++++.++.+..+.-+.|. +.|..|+|..++++..++|-++...|.+++|+++||+ ||
T Consensus 240 ~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr 319 (448)
T COG2271 240 AWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR 319 (448)
T ss_pred HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc
Confidence 34444444445678889999999999999999999888 6677899999999999999999999999999999995 66
Q ss_pred chhhHHHHHHHHHHHHHHHhhhh--hhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhh-HHHHH
Q 009409 179 RKVLQTGVLIWSLATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAG 255 (535)
Q Consensus 179 r~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g 255 (535)
|....+...+....+++....++ ++....++.++.|+..-+..........|..|++..|++.|+...+..+ |.+++
T Consensus 320 R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a 399 (448)
T COG2271 320 RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALA 399 (448)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhc
Confidence 66655544443333434334444 3578888999999998888888888889999999999999999999999 99999
Q ss_pred hhhHHHhccccchhHHHHHHHHHHHHHHHHhhhc
Q 009409 256 LLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (535)
Q Consensus 256 ~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 289 (535)
....+++.+.+||...|++..+.++++.+....+
T Consensus 400 ~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 400 GLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred CCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888776665544444
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.55 E-value=2.7e-14 Score=143.86 Aligned_cols=162 Identities=18% Similarity=0.228 Sum_probs=129.5
Q ss_pred hhhHhhhhhhhcccCCCc--------cchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhh-
Q 009409 131 VNLSVAIIPMSHRFGWNS--------SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG- 201 (535)
Q Consensus 131 ~~~~~~~~~~~~~~g~s~--------~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~- 201 (535)
.......+.+.++.|.+. .+.+...++..++..++.++.|+++||+|+|+++.++.++.+++..+.....+
T Consensus 225 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~ 304 (418)
T TIGR00889 225 QITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPE 304 (418)
T ss_pred HHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 334455566666666543 66799999999999999999999999999999999999988887655543222
Q ss_pred --hhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHH-HhhhhHHHHHhhhHHHhccc------cchhHHH
Q 009409 202 --FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIEN------LGWESVF 272 (535)
Q Consensus 202 --~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~------~gw~~~f 272 (535)
+++.+++.+++.|++.+...+....++.+++|+++|++++|+.+ ...++|.++||+++|++.++ +||++.|
T Consensus 305 ~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f 384 (418)
T TIGR00889 305 YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMW 384 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHH
Confidence 23556778999999998888888999999999999999999997 67889999999999999987 4699999
Q ss_pred HHHHHHHHHHH-HHhhhcccC
Q 009409 273 YIFGLLGIAWF-SGFKILQEG 292 (535)
Q Consensus 273 ~~~~~~~~~~~-~~~~~~~~~ 292 (535)
++.+++.++.. +..++++++
T Consensus 385 ~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 385 LFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHHHhCCc
Confidence 98888766554 444444443
No 124
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.53 E-value=2.2e-12 Score=121.30 Aligned_cols=249 Identities=16% Similarity=0.126 Sum_probs=174.1
Q ss_pred HHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhH
Q 009409 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPG 205 (535)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (535)
...+...-+|+.-.+.+++|++..+++.+....+....+..++.|.++||+|||+..++.+++++++++.- ..++++.
T Consensus 46 a~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k--~~~~~~~ 123 (354)
T PF05631_consen 46 AMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK--HSSNYPV 123 (354)
T ss_pred HHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH--hccccHH
Confidence 33444555666556667899999999999999999999999999999999999999999999998888653 5677899
Q ss_pred HHHHHHHhhhccCCchhhHHHHhh-hc----ccccchhhHHHHHH-HhhhhHHHHHhhhHHHhccccch--hHHHHHHHH
Q 009409 206 LVLSRVLVGIGEGVSPSAATDLIA-RS----IPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGW--ESVFYIFGL 277 (535)
Q Consensus 206 l~~~~~~~G~~~~~~~~~~~~~~~-~~----~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw--~~~f~~~~~ 277 (535)
++++|++.|++.+....+..+++. |. +|++..+..++... ..+++-.+.+.+++.++.+..+. ..+|....+
T Consensus 124 L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~ 203 (354)
T PF05631_consen 124 LLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIV 203 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHH
Confidence 999999999999999888887664 32 23233344444444 33455566677777777776554 778888777
Q ss_pred HHHHHHHHh-hhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHH
Q 009409 278 LGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCL 356 (535)
Q Consensus 278 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 356 (535)
+.++..+.. ...+|+...........+. . ...++.+.+||+++.+.++..+.-...|.+.
T Consensus 204 ~l~~~~~~I~~~W~ENyg~~~~~~~~~~~---~----------------~~a~~~i~~d~ril~LG~~qslFE~smy~FV 264 (354)
T PF05631_consen 204 LLAVAAVLILKTWPENYGDTSSSSSLSGS---F----------------REAWRAILSDPRILLLGLIQSLFEGSMYLFV 264 (354)
T ss_pred HHHHHHHHHHhcccccCCCcccccchHHH---H----------------HHHHHHHHcCchhHHHHHHHHHHHHHHHHhe
Confidence 665554433 3444543322111000000 0 0124677889999999999999988888875
Q ss_pred H-hhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHH
Q 009409 357 S-WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 398 (535)
Q Consensus 357 ~-~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr 398 (535)
. |.|..-. +-...-.|++++.+.++.++|+.+..++..+
T Consensus 265 flWtPaL~~---~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 265 FLWTPALDP---DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred eeeeceecC---CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5 5555441 1123347889999999999988887765553
No 125
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.53 E-value=2.7e-13 Score=139.88 Aligned_cols=172 Identities=12% Similarity=0.097 Sum_probs=129.6
Q ss_pred HHHHhhhhhhHhhhhhhh-cccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHH-HH-hhh
Q 009409 124 VICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL-LP-LLA 200 (535)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~-~~-~~~ 200 (535)
+......+.+..++|.+. +++|++..+.++..+...++..++.+++|+++||+|||+.+.++.++..++... .. ..+
T Consensus 260 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 339 (490)
T PRK10642 260 IATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINS 339 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 334445555666777755 668999888888888888999999999999999999999988877654433322 11 123
Q ss_pred hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc-chhHHHHHHHHHH
Q 009409 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLG 279 (535)
Q Consensus 201 ~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~~~~~ 279 (535)
++...+++++++.|++.+...+....++.+.+|++.|++++|+.+....+++.++|.+.+++.+.. +|+..+++..+.+
T Consensus 340 ~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~ 419 (490)
T PRK10642 340 NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVA 419 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 445667788888888777666777888889999999999999866666777889999999988764 4787777777777
Q ss_pred HHHHHHhhhcccCCCC
Q 009409 280 IAWFSGFKILQEGETS 295 (535)
Q Consensus 280 ~~~~~~~~~~~~~~~~ 295 (535)
++.++..+++||+++.
T Consensus 420 ~i~~~~~~~~pes~~~ 435 (490)
T PRK10642 420 VIGLITGVTMKETANR 435 (490)
T ss_pred HHHHHHHHHhccccCC
Confidence 7666666777876654
No 126
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.53 E-value=2e-13 Score=136.91 Aligned_cols=159 Identities=16% Similarity=0.111 Sum_probs=127.8
Q ss_pred hhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 009409 131 VNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLS 209 (535)
Q Consensus 131 ~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 209 (535)
..+....|. +.+++|.+..+.+++.+...+...++.+++|+++||+|||+.+..+.+...+..... ...++.+.+++.
T Consensus 233 ~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ 311 (393)
T PRK15011 233 SLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM-LMAHSPAILLGL 311 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-HHHhhHHHHHHH
Confidence 334455665 456789999999999888888888899999999999999998887766554444333 345666677788
Q ss_pred HHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhc
Q 009409 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (535)
Q Consensus 210 ~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 289 (535)
+++.+++.+...+....+..|.+| ++|++++++++....+|..++|.++|.+.+..||+..|++.+++.++.++..++.
T Consensus 312 ~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 312 QLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 888888777777777788888887 5699999999999999999999999999999999999998888877777766666
Q ss_pred cc
Q 009409 290 QE 291 (535)
Q Consensus 290 ~~ 291 (535)
++
T Consensus 391 ~~ 392 (393)
T PRK15011 391 KD 392 (393)
T ss_pred cC
Confidence 53
No 127
>PRK10054 putative transporter; Provisional
Probab=99.50 E-value=1.2e-12 Score=131.05 Aligned_cols=176 Identities=13% Similarity=0.102 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHH
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 415 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 415 (535)
+.++.+.+..++...+.+....++|.|+++.+|++..+.|++.+...++.++++++.|+++||+|+|+ ...
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~---------~~~ 77 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKR---------YML 77 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch---------hHH
Confidence 45677778888888888999999999999889999999999999999999999999999999998752 222
Q ss_pred HHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009409 416 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 495 (535)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 495 (535)
++.+...+...+.... ++....++...+.+.+.+...+....+..+..++++|+++.|+.+...++|.+++|.++|.+.
T Consensus 78 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 78 LAITAFASGFIAIPLV-NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred HHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333322 222333333344454444445555566677788999999999999999999999999999988
Q ss_pred cccCcchHHHHHHHHHHHHHHHhhhhhc
Q 009409 496 DSTHSWSMSLFAPSIFFYLTGTIVWLAF 523 (535)
Q Consensus 496 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 523 (535)
+ . +|...|.+.+++.++..++..+..
T Consensus 157 ~-~-g~~~~f~~~~~~~~i~~i~~~~~~ 182 (395)
T PRK10054 157 M-Q-SINLPFWLAAICSAFPLVFIQIWV 182 (395)
T ss_pred H-h-ccCcHHHHHHHHHHHHHHHHHHHH
Confidence 6 4 488888877766665544444433
No 128
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.50 E-value=3.6e-13 Score=142.28 Aligned_cols=139 Identities=12% Similarity=0.034 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcc
Q 009409 153 LVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI 232 (535)
Q Consensus 153 ~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~ 232 (535)
+...+..++.+++.++.|+++||+|||++++++.++.+++.++++ +.++...+++++++.|++.+..++...++++|++
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~-~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLS-FGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 335566688899999999999999999999999999888887775 4444567778888889888888899999999999
Q ss_pred cccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhcccCC
Q 009409 233 PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGE 293 (535)
Q Consensus 233 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 293 (535)
|.+.|++++|+..+...+|.++||++++.+.+. +...+|++.+++.++..++.+++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999999988764 466788888877777666677777644
No 129
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.50 E-value=1.6e-13 Score=136.72 Aligned_cols=154 Identities=16% Similarity=0.117 Sum_probs=127.2
Q ss_pred hhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhh-hhhHHH
Q 009409 129 DKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-FMPGLV 207 (535)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 207 (535)
.........+.+.+++|.+..+.+++.+.+.++..++.++.|++.||+|||+.+.++.++.+++.++.....+ +...++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T TIGR00890 220 SGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFL 299 (377)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHH
Confidence 3333444555667889999999999999999999999999999999999999999988887777765543222 122344
Q ss_pred HHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHH
Q 009409 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (535)
Q Consensus 208 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~ 282 (535)
+..++.|++.+...+....++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..||++.|++.+++.++.
T Consensus 300 ~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 300 ATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 567788888888888888899999999999999999999999999999999999999999999999988776654
No 130
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.50 E-value=8.1e-14 Score=117.63 Aligned_cols=134 Identities=29% Similarity=0.508 Sum_probs=117.0
Q ss_pred HHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccc
Q 009409 155 QSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL 234 (535)
Q Consensus 155 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 234 (535)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.++.. ..++++.+.+.+++.|++.+...+....++.|.+|+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFA-LSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 4456778889999999999999999999999888887776664 456678889999999999999999999999999999
Q ss_pred cchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhc
Q 009409 235 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (535)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 289 (535)
++|++.+++.+....+|..++|.+++.+.+..+|++.|++.+++.++..+...++
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999888776655544444
No 131
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.50 E-value=7.4e-13 Score=133.23 Aligned_cols=161 Identities=20% Similarity=0.141 Sum_probs=131.6
Q ss_pred hhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 009409 131 VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSR 210 (535)
Q Consensus 131 ~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 210 (535)
.....++|.+.++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++.. ..++.+.+++..
T Consensus 233 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 309 (399)
T PRK05122 233 GTIATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLW-LAPSPWMALIGA 309 (399)
T ss_pred HHHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-HhccHHHHHHHH
Confidence 3444555555556665 3456777888899999999999999999999999988888777776654 455667778889
Q ss_pred HHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhcc
Q 009409 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQ 290 (535)
Q Consensus 211 ~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 290 (535)
++.|++.+...+.....+.+.+|+++|++++++++....+|..++|++.|++.+..||++.|++.+++.++..+....++
T Consensus 310 ~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 310 ALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999888888888889999999999999999999999999999999999999999999998888777766666665
Q ss_pred cCCC
Q 009409 291 EGET 294 (535)
Q Consensus 291 ~~~~ 294 (535)
++++
T Consensus 390 ~~~~ 393 (399)
T PRK05122 390 RRAP 393 (399)
T ss_pred cccc
Confidence 5443
No 132
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.48 E-value=2.8e-11 Score=117.15 Aligned_cols=336 Identities=14% Similarity=0.087 Sum_probs=221.9
Q ss_pred hhhhhcc-cCCCccchh-HHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhh
Q 009409 137 IIPMSHR-FGWNSSVAG-LVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVG 214 (535)
Q Consensus 137 ~~~~~~~-~g~s~~~~~-~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G 214 (535)
.|.+.+. .|++..|+. -+.-...-.+.+..++...+.|..|.|++++++.+...+...++ .+.++...+-+..++.|
T Consensus 27 ~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~ll-l~~~sv~~mq~~q~~yg 105 (412)
T PF01770_consen 27 TPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLL-LFGTSVLAMQLMQFFYG 105 (412)
T ss_pred hHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH-HHHCcHHHHHHHHHHHH
Confidence 4445554 788888774 45555556677788899999999999999999988866666555 57788899999999999
Q ss_pred hccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcc--ccchhHHHHHHHHHHHHHHHHhhhcccC
Q 009409 215 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE--NLGWESVFYIFGLLGIAWFSGFKILQEG 292 (535)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 292 (535)
++.+. ..+..+++-...++++-.++.+...++..+|..++.++|-.+.. ..+++...++......+.++..+++|.+
T Consensus 106 ~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 106 LATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99765 56778888888898999999999999999999999999988775 4457777777666666667777778776
Q ss_pred CCCCCCCCCcch----h---hhhhhhhhhhh--HHHhccCCC----------CCcHHHhhhcHHHHHHHHHHHHHhhhhH
Q 009409 293 ETSNGATLAPRS----N---YINMKKSLSAS--LEEMGESLK----------DVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (535)
Q Consensus 293 ~~~~~~~~~~~~----~---~~~~~~~~~~~--~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (535)
++.....+.... . ....++....+ .++..+..+ ...+++..++|.++.-.+-+.+..++++
T Consensus 185 ~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~ 264 (412)
T PF01770_consen 185 KRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYY 264 (412)
T ss_pred CcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHH
Confidence 543221111100 0 00000000000 000000000 1124556678988888888888899999
Q ss_pred HHHHhhHHHHHHH--hCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhc
Q 009409 354 TCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 431 (535)
Q Consensus 354 ~~~~~~p~~l~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (535)
.+.++......+. -+-....-|.+-+...+.+.++.+..|++..++.+. .........++.+.++++...
T Consensus 265 qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~lm~~- 336 (412)
T PF01770_consen 265 QVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLFLMSF- 336 (412)
T ss_pred HHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHHHHHH-
Confidence 9888888888654 133444557788888888888888889885444321 222223333333333333332
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhh
Q 009409 432 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAV 482 (535)
Q Consensus 432 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l 482 (535)
.++.+...++.++.+.............++.....|..|.++|+++++..+
T Consensus 337 t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~ 387 (412)
T PF01770_consen 337 TGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALV 387 (412)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHH
Confidence 344455555666666555555555555667778888889999888876544
No 133
>PRK03545 putative arabinose transporter; Provisional
Probab=99.47 E-value=1.1e-12 Score=131.57 Aligned_cols=152 Identities=18% Similarity=0.094 Sum_probs=122.3
Q ss_pred hhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhc
Q 009409 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (535)
Q Consensus 137 ~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~ 216 (535)
.|.+.++.|.+..+.+++.+...++..++.++.|++.||+|+|+.. .+..+..++..+.....++.+.++++.++.|++
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~ 307 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIA 307 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 3445666899999999999999999999999999999999988654 444444444433333456667778888999998
Q ss_pred cCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhcc
Q 009409 217 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQ 290 (535)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 290 (535)
.+...+.....+.+..| ++|++++|+++....+|..+||+++|.+.++.|++..|++.+++.++..+......
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 308 IMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 87777777788888766 78999999999999999999999999999999999999999888776655544443
No 134
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.46 E-value=2e-13 Score=138.27 Aligned_cols=147 Identities=12% Similarity=0.049 Sum_probs=124.3
Q ss_pred cccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCch
Q 009409 142 HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP 221 (535)
Q Consensus 142 ~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~ 221 (535)
.+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.+ +.++.+.+++.+++.|++.+...
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~-~~~~~~~~~~~~~l~g~~~~~~~ 333 (420)
T PRK09528 255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSG-FATGPLEVSILKLLHAFEVPFLL 333 (420)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHH
Confidence 34466777889999999999999999999999999999999998888888776664 56667788889999999988877
Q ss_pred hhHHHHhhhcccccchhhHHHH-HHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhc
Q 009409 222 SAATDLIARSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (535)
Q Consensus 222 ~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 289 (535)
+....++.+.+|++.++...+. ++....+|.+++|.++|++.+..||+..|++.+++.++..++....
T Consensus 334 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 334 VGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred HHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999998888887665 6777889999999999999999999999999888876655444443
No 135
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.46 E-value=7.6e-13 Score=135.80 Aligned_cols=174 Identities=15% Similarity=0.068 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHH
Q 009409 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (535)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (535)
+..+++..++.+........+.|. +.+++|+|..+.++..+...++..++.+++|+++||+|||+.+.....+..++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 344555555566666667777886 4567999999999999999999999999999999999999887765544433322
Q ss_pred HHH-hhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhh-HHHHHhhhHHHhcc--------
Q 009409 195 LLP-LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIE-------- 264 (535)
Q Consensus 195 ~~~-~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~-------- 264 (535)
+.. ...++...+.+.+++.|++.............|.+|++.+|++.|+.+...++ |.+++|.+.|++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~ 419 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPI 419 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccc
Confidence 221 12344455667888888654444434446677999999999999999999886 77999999999999
Q ss_pred ----ccchhHHHHHHHHHHHHHHHHhhhc
Q 009409 265 ----NLGWESVFYIFGLLGIAWFSGFKIL 289 (535)
Q Consensus 265 ----~~gw~~~f~~~~~~~~~~~~~~~~~ 289 (535)
..||+..|++.+++.++..+..+.+
T Consensus 420 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 420 FGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred ccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999877776655544443
No 136
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.46 E-value=1.1e-12 Score=130.87 Aligned_cols=164 Identities=16% Similarity=0.014 Sum_probs=139.4
Q ss_pred HHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhh
Q 009409 120 SLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (535)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 199 (535)
.+..++.......+....|.+.+++|.+..++|++.+...++..++.++++++.||+|+|+.+.++.++.++...+.+ .
T Consensus 211 l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~-~ 289 (382)
T TIGR00902 211 LAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIG-A 289 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHH-h
Confidence 344444555566666677777788999999999999999999999999999999999999999999999888887765 5
Q ss_pred hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHH-HhhhhHHHHHhhhHHHhccccchhHHHHHHHHH
Q 009409 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (535)
Q Consensus 200 ~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~ 278 (535)
.++.+.+++.+++.|+..+...+....++.+. |+++|++.+++++ ...++|.++||.++|++.++.|+ ..|++.+++
T Consensus 290 ~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~ 367 (382)
T TIGR00902 290 IEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAII 367 (382)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHH
Confidence 77778889999999999999999999999988 8889999999986 46789999999999999999997 667777777
Q ss_pred HHHHHHHh
Q 009409 279 GIAWFSGF 286 (535)
Q Consensus 279 ~~~~~~~~ 286 (535)
.++.++..
T Consensus 368 ~~~~~~~~ 375 (382)
T TIGR00902 368 AAAAFFLI 375 (382)
T ss_pred HHHHHHHH
Confidence 66554443
No 137
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.46 E-value=4.6e-13 Score=135.21 Aligned_cols=159 Identities=19% Similarity=0.167 Sum_probs=127.3
Q ss_pred hhhhhHhhhhhhhcccCCCcc----chhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhh
Q 009409 129 DKVNLSVAIIPMSHRFGWNSS----VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMP 204 (535)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~s~~----~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (535)
......+.++.+.++.+.+.. ..+.+.++..++..++.+++|++.||+|||+.+..+.++..++.+... ..++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 312 (408)
T PRK09874 234 ATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMS-FVQTPL 312 (408)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH-HhccHH
Confidence 334455556665555433333 245666677788888999999999999999999988887766665543 445667
Q ss_pred HHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHH
Q 009409 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (535)
Q Consensus 205 ~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~ 284 (535)
.+++.+++.|++.+...+...+.+.+..+++++++.++++.....+|..+||.++|.+.+..||++.|++.+++.++..+
T Consensus 313 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~ 392 (408)
T PRK09874 313 QLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAV 392 (408)
T ss_pred HHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Confidence 78889999999999999999999989899899999999999999999999999999999999999999999888776655
Q ss_pred Hhhh
Q 009409 285 GFKI 288 (535)
Q Consensus 285 ~~~~ 288 (535)
....
T Consensus 393 ~~~~ 396 (408)
T PRK09874 393 YSWN 396 (408)
T ss_pred HHHH
Confidence 5444
No 138
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.45 E-value=1.4e-12 Score=128.41 Aligned_cols=166 Identities=28% Similarity=0.359 Sum_probs=145.0
Q ss_pred HHHHHHhhhhhhHhhhhhhhccc-CCCccchhHHHHHHHHHHHhhhccchhhhcccCCch-hhHHHHHHHHHHHHHHHhh
Q 009409 122 AFVICNMDKVNLSVAIIPMSHRF-GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRK-VLQTGVLIWSLATALLPLL 199 (535)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~~~ 199 (535)
..+........+....|.+.++. |.+..+.++..+...++..++.++.+++.||+|||+ .+..+..+..++.+... .
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 261 (352)
T cd06174 183 AFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA-L 261 (352)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-H
Confidence 34445556666677777766654 999999999999999999999999999999999999 99999888888887765 5
Q ss_pred hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHH
Q 009409 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (535)
Q Consensus 200 ~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~ 279 (535)
.++.+.+++..++.|++.+...+....++.+..|+++|++.+++.+....+|..++|.+.+.+.+..+|++.|++.+++.
T Consensus 262 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~ 341 (352)
T cd06174 262 APSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALA 341 (352)
T ss_pred hccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHH
Confidence 55568888999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHhhh
Q 009409 280 IAWFSGFKI 288 (535)
Q Consensus 280 ~~~~~~~~~ 288 (535)
++..+....
T Consensus 342 ~i~~i~~~~ 350 (352)
T cd06174 342 LLAALLLLL 350 (352)
T ss_pred HHHHHHhee
Confidence 776655543
No 139
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.45 E-value=8.8e-13 Score=133.03 Aligned_cols=161 Identities=23% Similarity=0.085 Sum_probs=129.1
Q ss_pred hhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHH
Q 009409 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (535)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (535)
.....+..+.|.+.++.|.+..+.+++.+.+.++..++.++.|++.||+|||+.+..+.+...++.++.. ..++.+.+.
T Consensus 234 ~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 312 (406)
T PRK11551 234 IVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALA-AAPSFAGML 312 (406)
T ss_pred HHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hcCcHHHHH
Confidence 3344455567888888999999999999999999999999999999999999998887666555555443 344556677
Q ss_pred HHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc-chhHHHHHHHHHHHHHHHHh
Q 009409 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGF 286 (535)
Q Consensus 208 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~~~~~~~~~~~~ 286 (535)
+..++.|++.+...+...+++.+.+|+++|++.+|+.+....+|..+||.++|++.++. +|...+++.+...++..+..
T Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 313 LAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHH
Confidence 77888888888888888999999999999999999999999999999999999998875 46666666655555544444
Q ss_pred hhc
Q 009409 287 KIL 289 (535)
Q Consensus 287 ~~~ 289 (535)
+.+
T Consensus 393 ~~~ 395 (406)
T PRK11551 393 LLL 395 (406)
T ss_pred HHH
Confidence 444
No 140
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.44 E-value=2.6e-12 Score=128.05 Aligned_cols=155 Identities=15% Similarity=0.150 Sum_probs=126.1
Q ss_pred hHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 009409 133 LSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (535)
Q Consensus 133 ~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 211 (535)
.....|. +.+++|.+..+.+++.+...+...++.++.|++.||+|||+++.++.++..+..... ...++.+.+++.++
T Consensus 218 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 296 (375)
T TIGR00899 218 YIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGL-AADNSLWALLMLQL 296 (375)
T ss_pred HHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 3344455 457789999999999888877788889999999999999999888776655544443 24456677778888
Q ss_pred HhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhc
Q 009409 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (535)
Q Consensus 212 ~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 289 (535)
+.|++.+...+....++.|..| +++++++++++....+|..++|.++|.+.+..||+..|++.+++.++..+...++
T Consensus 297 ~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 297 LNAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 9999888888888888889887 5677999999999999999999999999999999999999888877766655544
No 141
>PRK12382 putative transporter; Provisional
Probab=99.43 E-value=4e-12 Score=127.54 Aligned_cols=157 Identities=20% Similarity=0.196 Sum_probs=129.1
Q ss_pred hhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 009409 129 DKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVL 208 (535)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 208 (535)
.......+.|.+.++.|.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++.. ..++.+.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 307 (392)
T PRK12382 231 GFAVIGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLW-LAPTAWVALA 307 (392)
T ss_pred HHhHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HcccHHHHHH
Confidence 3334455556655666654 356677778888889999999999999999999998888777776654 4566677788
Q ss_pred HHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhh
Q 009409 209 SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (535)
Q Consensus 209 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 288 (535)
+.++.|++.+...+...+.+.+.+++++|++++|+++....+|..++|.+++++.++.||++.|++.+++.++..+....
T Consensus 308 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 308 GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 89999999988888888888999999999999999999999999999999999999999999999998877666555443
No 142
>PRK03699 putative transporter; Provisional
Probab=99.43 E-value=1.9e-12 Score=129.89 Aligned_cols=171 Identities=13% Similarity=0.181 Sum_probs=134.5
Q ss_pred HHHHHHHHHhhhhhhHhhhhhhh-cccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHH
Q 009409 119 TSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (535)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (535)
+.+..++.......+..+.|.+. +++|++..+.+++.+.+.++..++.++.|+++||+++|+.+.....+..+...+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~ 289 (394)
T PRK03699 210 LAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFV 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Confidence 33444444445556667778765 66899999999999999999999999999999999999998887776655554442
Q ss_pred hhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHH
Q 009409 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (535)
Q Consensus 198 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 277 (535)
..++...+.+..++.|++.+...+...++..+..+ +++++..+.......+|..++|.+.|++.+..||+..+++.++
T Consensus 290 -~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~ 367 (394)
T PRK03699 290 -NTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANG 367 (394)
T ss_pred -HcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHH
Confidence 44555566677788898888788887777777666 5567888999999999999999999999999999999999888
Q ss_pred HHHHHHHHhhhccc
Q 009409 278 LGIAWFSGFKILQE 291 (535)
Q Consensus 278 ~~~~~~~~~~~~~~ 291 (535)
+.++..+....+++
T Consensus 368 ~~~~~~~~~~~~~~ 381 (394)
T PRK03699 368 LYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 87766555555444
No 143
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.42 E-value=7.4e-12 Score=125.44 Aligned_cols=166 Identities=14% Similarity=0.040 Sum_probs=127.3
Q ss_pred HHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhh
Q 009409 122 AFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG 201 (535)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 201 (535)
.+++..........+.|.+.+++|.+..+.+...+.+.++..++.++.|++.||+|||+.+.++..+..++..+.....+
T Consensus 213 ~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~ 292 (393)
T PRK09705 213 YFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL 292 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc
Confidence 33344455556666777777779999999999999999999999999999999999999998887776666554432333
Q ss_pred hhhHHHHHHHHhhhccCCchhhHHHHhhhccc-ccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc-hhHHHHHHHHHH
Q 009409 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLG 279 (535)
Q Consensus 202 ~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~ 279 (535)
+...+ ..++.|++.+...+.......+.++ ++++++.+|+.+....++..++|.+.|++.+..| |+..|++.++..
T Consensus 293 ~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~ 370 (393)
T PRK09705 293 QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCV 370 (393)
T ss_pred hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 32222 2346688888888877777777774 5789999999999999999999999999999876 788888877766
Q ss_pred HHHHHHhhhc
Q 009409 280 IAWFSGFKIL 289 (535)
Q Consensus 280 ~~~~~~~~~~ 289 (535)
++..+....+
T Consensus 371 ~~~~~~~~~~ 380 (393)
T PRK09705 371 VGLMIITLRF 380 (393)
T ss_pred HHHHHHHHHh
Confidence 6554444333
No 144
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.42 E-value=3.5e-12 Score=127.42 Aligned_cols=155 Identities=15% Similarity=0.145 Sum_probs=126.8
Q ss_pred hhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 009409 131 VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSR 210 (535)
Q Consensus 131 ~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 210 (535)
.....++|.+.++.|.+..+.+++.+...++..+++++.|++.||+|+|+++..+..+..++.+.. . .. .......
T Consensus 217 ~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~--~-~~-~~~~~~~ 292 (381)
T PRK03633 217 GSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM--L-SQ-AAMAPAL 292 (381)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH--h-hh-HHHHHHH
Confidence 344456787777889999999999999999999999999999999999999988877776665443 2 22 3344567
Q ss_pred HHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhc
Q 009409 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (535)
Q Consensus 211 ~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 289 (535)
++.|++.....|...+.+.|..|+++++...+......++|.++||.++|++.++.||++.|++.+.+.++..+..+..
T Consensus 293 ~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 293 FILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 7788877778899999999999888888888888889999999999999999999999999999888776655444433
No 145
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.42 E-value=2.9e-12 Score=128.48 Aligned_cols=168 Identities=14% Similarity=0.064 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHhhhhhhHhhhhhh-hcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchh--hHH------HHH
Q 009409 117 GTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKV--LQT------GVL 187 (535)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~--~~~------~~~ 187 (535)
....+..+........+....|.+ .+++|.+..+.+++.+...++..++.+++|+++||+|||+. ... +.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (399)
T TIGR00893 218 WGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGL 297 (399)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Confidence 334445555566666677777764 56689999999999999999999999999999999999961 111 111
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc
Q 009409 188 IWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (535)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (535)
+.++...... ..++....+...++.+++. ...+...+++.|.+|+++|++++++.+....+|..++|.+.+++.+..|
T Consensus 298 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 298 VLSLLMFATN-YVNIPYAALALVALGFFGL-GAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred HHHHHHHHhc-cchhHHHHHHHHHHHHhch-hhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC
Confidence 1111111111 1223233333334444444 4788999999999999999999999999999999999999999999988
Q ss_pred -hhHHHHHHHHHHHHHHHHh
Q 009409 268 -WESVFYIFGLLGIAWFSGF 286 (535)
Q Consensus 268 -w~~~f~~~~~~~~~~~~~~ 286 (535)
|++.|++.+++.++..+..
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 376 SFAGALMVVAALALIGALSY 395 (399)
T ss_pred chhHHHHHHHHHHHHHHHHH
Confidence 9999999888776655443
No 146
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.42 E-value=5.8e-13 Score=133.53 Aligned_cols=164 Identities=15% Similarity=0.125 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHhhhhhhHhhhhhhh-cccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH-H
Q 009409 117 GTTSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT-A 194 (535)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~-~ 194 (535)
....+..+.............|.+. +++|.+..+.++..+...++..++.++.|+++||+|||+.+..+..+..+.. .
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 301 (394)
T TIGR00883 222 LLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVP 301 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 3344444455555566666777755 7789999999999999999999999999999999999998876554443333 1
Q ss_pred HHHhh--hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHH-HHhhhhHHHHHhhhHHHhccccc-hhH
Q 009409 195 LLPLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFV-FGGLSFGSVAGLLLAPPIIENLG-WES 270 (535)
Q Consensus 195 ~~~~~--~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~g-w~~ 270 (535)
+.... .++.+.+++..++.|++.+...+...+++.|.+|+++|++++++. .....+|..++|.++|.+.++.| |++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~ 381 (394)
T TIGR00883 302 LLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYA 381 (394)
T ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchh
Confidence 21112 244556667788889888888899999999999999999999984 55667899999999999999888 888
Q ss_pred HHHHHHHHHH
Q 009409 271 VFYIFGLLGI 280 (535)
Q Consensus 271 ~f~~~~~~~~ 280 (535)
.++...+..+
T Consensus 382 ~~~~~~~~~l 391 (394)
T TIGR00883 382 IGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHH
Confidence 8777665443
No 147
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.41 E-value=1.6e-11 Score=123.90 Aligned_cols=176 Identities=13% Similarity=0.133 Sum_probs=125.1
Q ss_pred cHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHH-HHcCCCchhHHHHH
Q 009409 335 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL-IATGVETTMVRKIC 413 (535)
Q Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~~~~~~~ 413 (535)
.+.++.+....+...+.+|++..++|.|+++.+|++..+++.+.........++.+++|+++||+ |+| + .
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr--------r-~ 78 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR--------M-A 78 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH--------H-H
Confidence 35667777777888889999999999999988999999999999999999999999999999999 754 2 2
Q ss_pred HHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCc--chhHHHHHHHHhhhhhhhHHHHHH
Q 009409 414 QTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE--YASILLGITNTVGAVPGIVGVALT 491 (535)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~lg~~igp~i~ 491 (535)
..++.+...+...+............+...+..++.+...+.......+.+|++ +|.++.++.+...++|+.++|.+.
T Consensus 79 iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~ 158 (493)
T PRK15462 79 VMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC 158 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH
Confidence 233333333333222221111222333333344444544454455666767765 699999999999999999999999
Q ss_pred HHHhcccCcchHHHHHHHHHHHHHHHhhhh
Q 009409 492 GYLLDSTHSWSMSLFAPSIFFYLTGTIVWL 521 (535)
Q Consensus 492 G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 521 (535)
|++.+..| |...|.+.++..++ +++.+.
T Consensus 159 g~L~~~~G-w~~~F~iaaigm~l-~li~~~ 186 (493)
T PRK15462 159 GYAQEEYS-WAMGFGLAAVGMIA-GLVIFL 186 (493)
T ss_pred HHHHhhhC-hHHHHHHHHHHHHH-HHHHHH
Confidence 99999874 99999886654433 333333
No 148
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.41 E-value=3.7e-12 Score=129.44 Aligned_cols=172 Identities=14% Similarity=0.019 Sum_probs=117.7
Q ss_pred HHHHHHHHHHhhhhhhHhhhhhhh-cccCCCccchhHHHHHHHHHHHhhhccchhhhccc--CCchhh-HHHHHHHHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVL-QTGVLIWSLAT 193 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--g~r~~~-~~~~~~~~~~~ 193 (535)
.+.+..+........+..+.|.+. +++|++..+.++..+.+.++..++.+++|+++||+ ++|+.. ....+...+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~ 326 (434)
T PRK11663 247 LLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSV 326 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHH
Confidence 334444445555556666777755 67899999999999999999999999999999998 333332 22111111111
Q ss_pred HHHH-hhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHH
Q 009409 194 ALLP-LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (535)
Q Consensus 194 ~~~~-~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f 272 (535)
.... ....+...+.+..+..|++...........+.|.+|+++|++++|+.+....+|.+++|.+.|++.++.||+..|
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f 406 (434)
T PRK11663 327 GSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFF 406 (434)
T ss_pred HHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHH
Confidence 1111 112222333344455555433333334456788899899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhc
Q 009409 273 YIFGLLGIAWFSGFKIL 289 (535)
Q Consensus 273 ~~~~~~~~~~~~~~~~~ 289 (535)
++.+++.++..+.....
T Consensus 407 ~~~~~~~~~~~~~~~~~ 423 (434)
T PRK11663 407 VVISIAAGISALLLLPF 423 (434)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988877665544433
No 149
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.41 E-value=2e-12 Score=130.78 Aligned_cols=161 Identities=19% Similarity=0.119 Sum_probs=132.5
Q ss_pred hhHhhhhhhhcc-cCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 009409 132 NLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSR 210 (535)
Q Consensus 132 ~~~~~~~~~~~~-~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 210 (535)
.+....|.+.++ +|.+..+.+++.+...++..++.++.+++.||.++++.+..+.++.+++.++.. ..++.+.+.++.
T Consensus 241 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 319 (417)
T PRK10489 241 AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFG-LMPMWILAVLCL 319 (417)
T ss_pred hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHH-ccchHHHHHHHH
Confidence 345567776666 899999999999999999999999999999998888888888777777765553 556666777888
Q ss_pred HHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHH-HHHhhhc
Q 009409 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKIL 289 (535)
Q Consensus 211 ~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~-~~~~~~~ 289 (535)
++.|++.+...+...+++.+..|++.|++++|++.....+|..+||.+.|.+.+..|++..+++.+++.++. .+....+
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 899998887777788899999998999999999999999999999999999999999999998887766554 4444444
Q ss_pred ccCC
Q 009409 290 QEGE 293 (535)
Q Consensus 290 ~~~~ 293 (535)
++.+
T Consensus 400 ~~~~ 403 (417)
T PRK10489 400 GELR 403 (417)
T ss_pred cccc
Confidence 5444
No 150
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.41 E-value=1.4e-11 Score=126.08 Aligned_cols=169 Identities=10% Similarity=0.093 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHH--hCCChhhHHHHHhhHHHHHHHHHHHHHHHHHH-HHHcCCCchhHHHH
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTMVRKI 412 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~ 412 (535)
+.++.+.+..++..++++++..++|.|+++. +|++..+++.+.....++..++.+++|+++|| +|+| .
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~---------~ 80 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK---------K 80 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH---------H
Confidence 4566677778888899999999999999877 89999999999999999999999999999999 7864 3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCc---chhHHHHHHHHhhhhhhhHHHH
Q 009409 413 CQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE---YASILLGITNTVGAVPGIVGVA 489 (535)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~lg~~igp~ 489 (535)
.+..+.+..++...+.... ++.....++.++.+++.+...+.......+.++++ +|+++.++.+...++|..+||.
T Consensus 81 ~l~~~~~~~~~g~~~~~~~-~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~ 159 (475)
T TIGR00924 81 TMVLGGIVLMLGHFMLAMS-IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPL 159 (475)
T ss_pred HHHHHHHHHHHHHHHHHhc-ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHH
Confidence 3344444444444444332 23334445556677777666666666666666654 4888999999999999999999
Q ss_pred HHHHHhcccCcchHHHHHHHHHHHHH
Q 009409 490 LTGYLLDSTHSWSMSLFAPSIFFYLT 515 (535)
Q Consensus 490 i~G~l~~~~g~~~~~~~~~~~~~~~~ 515 (535)
++|++.+..| |...|.+.++..+++
T Consensus 160 l~g~l~~~~g-~~~~f~~~~~~~~~~ 184 (475)
T TIGR00924 160 LAGVIAENYG-YHVGFNLAAVGMVIG 184 (475)
T ss_pred HHHHHHHhcC-hHHHHHHHHHHHHHH
Confidence 9999999874 999998877544444
No 151
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.41 E-value=1.3e-12 Score=133.44 Aligned_cols=176 Identities=13% Similarity=0.033 Sum_probs=119.3
Q ss_pred HHHHHHHHHHhhhhhhHhhhhhhhc-ccCCCccchhHHHHHHHHHHHhhhccchhhhccc--CCchhhH-HHHHHHHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVLQ-TGVLIWSLAT 193 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--g~r~~~~-~~~~~~~~~~ 193 (535)
...+..++.+........++|.+.+ +.|++..+.+++.+.+.++..++.+++|+++||+ +||+... ....+..++.
T Consensus 257 ~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~ 336 (452)
T PRK11273 257 YIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIAT 336 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHH
Confidence 3344444444444556667888555 4799999999999999999999999999999999 5554332 2222223332
Q ss_pred HHHHhh-hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHH-HhhhHHHhccccchhHH
Q 009409 194 ALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA-GLLLAPPIIENLGWESV 271 (535)
Q Consensus 194 ~~~~~~-~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~gw~~~ 271 (535)
++.... .++.+..+++.++.|.+..........+..|.+|+++||+++|+.+....+|..+ +|.++|++.+..||+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~ 416 (452)
T PRK11273 337 IVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGG 416 (452)
T ss_pred HHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHH
Confidence 222111 2233344445555565433333334456779999999999999999888887654 79999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCC
Q 009409 272 FYIFGLLGIAWFSGFKILQEGE 293 (535)
Q Consensus 272 f~~~~~~~~~~~~~~~~~~~~~ 293 (535)
|++.++.+++.++....+...+
T Consensus 417 f~~~~~~~~~~~~~~~~~~~~~ 438 (452)
T PRK11273 417 FMVMIGGSILAVILLIVVMIGE 438 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhccc
Confidence 9998887776665555554433
No 152
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.41 E-value=2.3e-12 Score=133.63 Aligned_cols=149 Identities=16% Similarity=0.151 Sum_probs=117.1
Q ss_pred hhHhhhhhhh-cccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhh-hhhhhHHHHH
Q 009409 132 NLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-AGFMPGLVLS 209 (535)
Q Consensus 132 ~~~~~~~~~~-~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~ 209 (535)
.....+|.+. +++|.+..+.+++.+...++..++.+++|+++||+|||+++..+.++..+..++.... ..+.+.+.+.
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLL 372 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence 3456677766 5899999999999999999999999999999999999999888876655554433222 2333334444
Q ss_pred HHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHH
Q 009409 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGI 280 (535)
Q Consensus 210 ~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~ 280 (535)
.++.++......+...+++.+.+|+++|++.+++.+....+|..+||+++|.+.+.+||+..++..++...
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~ 443 (496)
T PRK03893 373 LFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLT 443 (496)
T ss_pred HHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHH
Confidence 55554444445566778889999999999999999999999999999999999999999988877665443
No 153
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=7.7e-12 Score=120.43 Aligned_cols=176 Identities=17% Similarity=0.140 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
++...+....+........+++.-|.+.+..|+|.+.++++.-.|.++..+|.++.|+++|| +.|+.+.....+.++..
T Consensus 212 ~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~ 290 (394)
T COG2814 212 GVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALAL 290 (394)
T ss_pred hHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHH
Confidence 44444444444444445556666788888999999999999999999999999999999999 99999999988888888
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHH
Q 009409 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (535)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 273 (535)
+.+.+..++.+..++.-++.|+............+++ ..++.+..+.+++....++|..+|..++|.+.+++|+....+
T Consensus 291 l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~ 369 (394)
T COG2814 291 LALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGW 369 (394)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHH
Confidence 8877777877777788888888888777777777777 445899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccc
Q 009409 274 IFGLLGIAWFSGFKILQE 291 (535)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~ 291 (535)
+.+++.++.++..+....
T Consensus 370 ~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 370 VGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999988777666554433
No 154
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.39 E-value=4.1e-12 Score=130.95 Aligned_cols=177 Identities=16% Similarity=0.102 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
++.+...++..+...........+.|.+.+++|.+..+.++......++..++.+++|+++||+|||+.+.++.++.+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 283 RRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 44555555555555555566667788888899999988899999999999999999999999999999999988777776
Q ss_pred HHHHHhh----hh------hhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHh
Q 009409 193 TALLPLL----AG------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (535)
Q Consensus 193 ~~~~~~~----~~------~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (535)
.++.... .+ +...+....++.+.......+....++.|.+|+++|++++++......+|.+++|.+.+.+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~ 442 (481)
T TIGR00879 363 LFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTM 442 (481)
T ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555411 11 2222333333333333334466677889999999999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhhc
Q 009409 263 IENLGWESVFYIFGLLGIAWFSGFKIL 289 (535)
Q Consensus 263 ~~~~gw~~~f~~~~~~~~~~~~~~~~~ 289 (535)
.++.+|++.|++.++++++..+...++
T Consensus 443 ~~~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 443 LESIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHhcCccceehhHHHHHHHHHHHHhee
Confidence 999999999999888877665555443
No 155
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.39 E-value=4.3e-12 Score=127.65 Aligned_cols=168 Identities=14% Similarity=0.122 Sum_probs=126.8
Q ss_pred HHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhH-HHHHHHHHHHHHHHh
Q 009409 120 SLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ-TGVLIWSLATALLPL 198 (535)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~~~~~ 198 (535)
.+..+...........+.|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+....
T Consensus 228 ~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~ 307 (402)
T TIGR00897 228 GMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYY 307 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 3444445555566677788888889999999999999999999999999999999999988764 333333333222211
Q ss_pred h----hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHH
Q 009409 199 L----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (535)
Q Consensus 199 ~----~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~ 274 (535)
. .++.+.+++..++.|++.+...+ ....+.+..| ++|++++|+.+....+|..++|.+++.+.+..||+..|++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~ 385 (402)
T TIGR00897 308 IPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWI 385 (402)
T ss_pred HHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Confidence 1 23455667788888888776544 3456666554 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc
Q 009409 275 FGLLGIAWFSGFKIL 289 (535)
Q Consensus 275 ~~~~~~~~~~~~~~~ 289 (535)
.+++.++..+...++
T Consensus 386 ~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 386 FAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHh
Confidence 988876655554443
No 156
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.38 E-value=1.1e-12 Score=133.86 Aligned_cols=162 Identities=18% Similarity=0.172 Sum_probs=127.7
Q ss_pred HHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhccc--CCchhhHHH--HHHHHHHHHHH
Q 009409 121 LAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVLQTG--VLIWSLATALL 196 (535)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--g~r~~~~~~--~~~~~~~~~~~ 196 (535)
+..++..+.......++|.+.+++|.+..+.+++.++..++..++++++|+++||. ++|+...++ .++.+++.++.
T Consensus 248 ~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~ 327 (455)
T TIGR00892 248 SGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLC 327 (455)
T ss_pred HHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555667777788999999999999999999999999999999984 334333332 23333333333
Q ss_pred HhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc-chhHHHHHH
Q 009409 197 PLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIF 275 (535)
Q Consensus 197 ~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~ 275 (535)
...++++.+++.+++.|++.+...+...+++.|.+|++++++.+|+++....+|.++||.++|.+.+.. +|++.|++.
T Consensus 328 -~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~ 406 (455)
T TIGR00892 328 -ALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYAS 406 (455)
T ss_pred -HHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHh
Confidence 345667788889999999999999999999999999999999999999999999999999999999877 599999998
Q ss_pred HHHHHHHH
Q 009409 276 GLLGIAWF 283 (535)
Q Consensus 276 ~~~~~~~~ 283 (535)
+++.++..
T Consensus 407 ~~~~li~~ 414 (455)
T TIGR00892 407 GSIVVSAG 414 (455)
T ss_pred hHHHHHHH
Confidence 88765543
No 157
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.38 E-value=2.3e-11 Score=120.00 Aligned_cols=166 Identities=19% Similarity=0.244 Sum_probs=129.0
Q ss_pred HHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHH
Q 009409 342 IYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSP 421 (535)
Q Consensus 342 ~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 421 (535)
.+..++...........+|.++.+++|.+..+.+++.+...++..++.++.|+++||+|+| .....+.+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~l~~~~~~~ 72 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR---------RVLIIGLLLF 72 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH---------HHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe---------eeEeehhhhh
Confidence 3455666666677778888677778999999999999999999999999999999999865 2444444444
Q ss_pred HHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcc
Q 009409 422 AVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSW 501 (535)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~ 501 (535)
++...+..+. .+.+..++..++.|++.+...+.....+.+..++++|++++|+.+....+|..++|.+++.+.+.. +|
T Consensus 73 ~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~ 150 (352)
T PF07690_consen 73 ALGSLLLAFA-SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GW 150 (352)
T ss_dssp HHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HH
T ss_pred hhHHHHhhhh-hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-cc
Confidence 4442222222 334466677778888888888888888888899999999999999999999999999999999776 48
Q ss_pred hHHHHHHHHHHHHHHHh
Q 009409 502 SMSLFAPSIFFYLTGTI 518 (535)
Q Consensus 502 ~~~~~~~~~~~~~~~~~ 518 (535)
...|++.+++.++..++
T Consensus 151 ~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 151 RWAFLISAILSLIAAIL 167 (352)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred ccccccccchhhhhhhh
Confidence 88888888777766554
No 158
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.38 E-value=4e-11 Score=120.40 Aligned_cols=173 Identities=13% Similarity=0.154 Sum_probs=130.9
Q ss_pred HHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHH
Q 009409 339 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 418 (535)
Q Consensus 339 ~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 418 (535)
+.+....++...+.+.+..++|.|+++.+|.+..+.|++.+...+...+.+++.|+++||+++| .....+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k---------~~l~~~~ 83 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK---------PMIVTGM 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch---------HHHHHHH
Confidence 4555777788888888999999999888999999999999999999999999999999999864 2333344
Q ss_pred HHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhccc
Q 009409 419 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 498 (535)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~ 498 (535)
....+....... .++.++.++..++.|++.+...+.....+.+..++++++++.|+.+...++|..+||.++|++. ..
T Consensus 84 ~~~~~~~~~~~~-~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~ 161 (400)
T PRK11646 84 LMRAAGFATMAI-AHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY 161 (400)
T ss_pred HHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh
Confidence 444444443333 2344455566666777766666666667777789999999999999999999999999999999 44
Q ss_pred CcchHHHHHHHHHHHHHHHhhhhhc
Q 009409 499 HSWSMSLFAPSIFFYLTGTIVWLAF 523 (535)
Q Consensus 499 g~~~~~~~~~~~~~~~~~~~~~~~~ 523 (535)
+|...|++.+++.++..++.....
T Consensus 162 -g~~~~f~~~~~~~~~~~i~~~~~~ 185 (400)
T PRK11646 162 -DFRLVCATGAVLFVLAAAFNAWLL 185 (400)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHhC
Confidence 488888877665555544443333
No 159
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.37 E-value=5.3e-11 Score=122.57 Aligned_cols=175 Identities=11% Similarity=0.092 Sum_probs=124.3
Q ss_pred HhhhcH-HHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHH-HHHcCCCchh
Q 009409 331 AIFRSK-AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTM 408 (535)
Q Consensus 331 ~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~ 408 (535)
+.+++| .++......++..+++|.+..++|.|+++.+|++..+++.+............+++|+++|| +|+|
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r------ 88 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK------ 88 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH------
Confidence 344665 58888888899999999999999999999999999998877776665555556789999999 4864
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcc--hhHHHHHHHHhhhhhhhH
Q 009409 409 VRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY--ASILLGITNTVGAVPGIV 486 (535)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~lg~~i 486 (535)
.....+.++..+...+.....+......++.++.+++.+...+.......+.+++++ ++.+.++.+...++|..+
T Consensus 89 ---~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~ 165 (500)
T PRK09584 89 ---RVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF 165 (500)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH
Confidence 233344444443333333322222334445556677766666666566666666543 456888999999999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHHHHHH
Q 009409 487 GVALTGYLLDSTHSWSMSLFAPSIFFYLT 515 (535)
Q Consensus 487 gp~i~G~l~~~~g~~~~~~~~~~~~~~~~ 515 (535)
+|.++|++.+..| |...|.+.++..+++
T Consensus 166 gp~i~g~l~~~~g-~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 166 SMLATPWLAAKYG-WSVAFALSVVGMLIT 193 (500)
T ss_pred HHHHHHHHHHhhC-HHHHHHHHHHHHHHH
Confidence 9999999999884 999998866544443
No 160
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.36 E-value=2.6e-12 Score=129.47 Aligned_cols=146 Identities=11% Similarity=0.111 Sum_probs=117.8
Q ss_pred hhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 009409 130 KVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVL 208 (535)
Q Consensus 130 ~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 208 (535)
........|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++.++.........++.+.+.+
T Consensus 254 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (405)
T TIGR00891 254 SHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGL 333 (405)
T ss_pred HhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHH
Confidence 3344445555 556789999999999999999999999999999999999999988877653333332223445455666
Q ss_pred HHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc-hhHHHHHH
Q 009409 209 SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIF 275 (535)
Q Consensus 209 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~ 275 (535)
..++.|++.+...+....++.|.+|+++|++++|+.+....+|..++|+++|++.++.| |+..+...
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 334 GLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 66777877777778888999999999999999999999999999999999999999988 88766653
No 161
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.36 E-value=3.4e-12 Score=132.25 Aligned_cols=175 Identities=12% Similarity=0.051 Sum_probs=116.1
Q ss_pred HHHHHHHHhhhhhhHhhhhhhhcccCCCccchhH------------HHHHHHHHHHhhhccchhhhcccCCchhhHHHHH
Q 009409 120 SLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGL------------VQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVL 187 (535)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~------------~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 187 (535)
....+...+..+......|.+.++.|.+..+.+. ...+..++..++.+++++++||+|||++++++..
T Consensus 294 ~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~ 373 (502)
T TIGR00887 294 AGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFF 373 (502)
T ss_pred HHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHH
Confidence 3334433334444455578877888887653321 1233445566688889999999999999988887
Q ss_pred HHHHHHHHHHhhhh---hhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcc
Q 009409 188 IWSLATALLPLLAG---FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (535)
Q Consensus 188 ~~~~~~~~~~~~~~---~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (535)
+.+++..+.+...+ ....+...-+...++.....+..+.+.+|.+|.+.|++++|+.+....+|.+++|.+.+++.+
T Consensus 374 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 453 (502)
T TIGR00887 374 ILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQ 453 (502)
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhc
Confidence 77766655543221 111122221222222233446677788999999999999999999999999999999999887
Q ss_pred c----------cchhHHHHHHHHHHHHHHHHhhhcccCCC
Q 009409 265 N----------LGWESVFYIFGLLGIAWFSGFKILQEGET 294 (535)
Q Consensus 265 ~----------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 294 (535)
. .++...|++.+++.++..+..+++||++.
T Consensus 454 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 454 HGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHHheEeccCCC
Confidence 3 34566788887777666555566666443
No 162
>PRK09952 shikimate transporter; Provisional
Probab=99.36 E-value=1e-11 Score=126.31 Aligned_cols=167 Identities=14% Similarity=0.102 Sum_probs=119.7
Q ss_pred HHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhh--h-
Q 009409 125 ICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL--A- 200 (535)
Q Consensus 125 ~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~- 200 (535)
...........+.|. +.+++|.+......+..+..+...++.+++|+++||+|||+++..+.++..++.+..... .
T Consensus 261 ~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 340 (438)
T PRK09952 261 CELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQ 340 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333444445555565 456788888766666666677778888999999999999999888866654443322111 1
Q ss_pred hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHh-hhhHHHHHhhhHHHhcccc--chhHHHHHHHH
Q 009409 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGG-LSFGSVAGLLLAPPIIENL--GWESVFYIFGL 277 (535)
Q Consensus 201 ~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~~~~--gw~~~f~~~~~ 277 (535)
++...+++..++.|++.+...+..++++.|.+|.+.|+...++.+.. ..+|+.++|.+.+++.+.. +|+..+.+.++
T Consensus 341 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~ 420 (438)
T PRK09952 341 SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLA 420 (438)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 23334445566677887777888899999999999999999986544 4589999999999998743 48888888877
Q ss_pred HHHHHHHHhhhccc
Q 009409 278 LGIAWFSGFKILQE 291 (535)
Q Consensus 278 ~~~~~~~~~~~~~~ 291 (535)
+.++..+..+.+++
T Consensus 421 ~~~i~~v~~~~~~~ 434 (438)
T PRK09952 421 GCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHHHccc
Confidence 77776666665544
No 163
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.35 E-value=6.7e-11 Score=121.19 Aligned_cols=168 Identities=11% Similarity=0.115 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHH-HHHcCCCchhHHHHHH
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTMVRKICQ 414 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~ 414 (535)
+.++.+....+...+++|+...+++.|+++.+|++..+++.+...+.....+..+++|+++|| +|+| ...
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r---------~~~ 84 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK---------RTI 84 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH---------HHH
Confidence 567777788888899999999999999999999999999888888887788888899999999 8865 333
Q ss_pred HHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCc--chhHHHHHHHHhhhhhhhHHHHHHH
Q 009409 415 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE--YASILLGITNTVGAVPGIVGVALTG 492 (535)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~lg~~igp~i~G 492 (535)
..+.++..+...............+++..+.+++.+...+.....+.+.+|++ +|+.+.++.+...++|..+||.++|
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g 164 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP 164 (489)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 34444433333333332222223335566677777777777777788878776 4578999999999999999999999
Q ss_pred HHhcccCcchHHHHHHHHHHH
Q 009409 493 YLLDSTHSWSMSLFAPSIFFY 513 (535)
Q Consensus 493 ~l~~~~g~~~~~~~~~~~~~~ 513 (535)
++.+..| |.+.|++.++...
T Consensus 165 ~l~~~~g-w~~~F~i~~i~~~ 184 (489)
T PRK10207 165 VIADKFG-YSVTYNLCGAGLI 184 (489)
T ss_pred HHHHhhC-hHHHHHHHHHHHH
Confidence 9999985 9999988655333
No 164
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.33 E-value=6.8e-11 Score=121.67 Aligned_cols=156 Identities=12% Similarity=0.099 Sum_probs=119.4
Q ss_pred hhhhhcccCCCccchhHHHH-HHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHH---HhhhhhhhHHHHHHHH
Q 009409 137 IIPMSHRFGWNSSVAGLVQS-SFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL---PLLAGFMPGLVLSRVL 212 (535)
Q Consensus 137 ~~~~~~~~g~s~~~~~~~~s-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~ 212 (535)
.|.+.+++|++..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.++..++. ....++...+.+..++
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l 325 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFF 325 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 34456779999999999974 6668999999999999999999988777665544443222 1112343344445566
Q ss_pred hhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhcccC
Q 009409 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEG 292 (535)
Q Consensus 213 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 292 (535)
..++.+...+...++..+..+++.+++.+++.+....+|..+++.++|++.+..||+..|.+.+++++..++....++++
T Consensus 326 ~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 326 ENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55555555566788888899988999999999999999999999999999999999999999888887776666665543
No 165
>PRK10504 putative transporter; Provisional
Probab=99.33 E-value=1.5e-10 Score=119.26 Aligned_cols=177 Identities=14% Similarity=0.141 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHH
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 415 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 415 (535)
+.+|.+.+..++.....+.+..++|.+.+ .+|.++.+.+++.+...++..++.++.|+++||+|+| + ...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-------~--~~~ 79 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR-------N--IFF 79 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-------H--HHH
Confidence 46777778888888888888999999996 4899999999999888899999999999999999875 2 222
Q ss_pred HHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009409 416 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 495 (535)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 495 (535)
.+.+..+++...... ..+....++..++.|++.+...+.......+..++++++++.|+.+...++|..++|.++|.+.
T Consensus 80 ~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 80 TAIVLFTLGSLFCAL-SGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred HHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 223333333333222 2344455666777888877777777777777788999999999999999999999999999999
Q ss_pred cccCcchHHHHHHHHHHHHHHHhhhhhcc
Q 009409 496 DSTHSWSMSLFAPSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 496 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (535)
+.. +|...|.+...+..+..++.....+
T Consensus 159 ~~~-gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 159 EYA-SWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred hhc-cHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 987 4998998876655555554444433
No 166
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.32 E-value=8.4e-12 Score=123.93 Aligned_cols=196 Identities=17% Similarity=0.068 Sum_probs=148.8
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCc
Q 009409 100 ASYWPPWKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR 179 (535)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r 179 (535)
..-++.+++...|+...+.+.+....+..+.+.+..+...+.++.|++..++-++.....+...+..+++..+.||+|||
T Consensus 256 ~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR 335 (485)
T KOG0569|consen 256 ISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR 335 (485)
T ss_pred CcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 33444455556667766676777777777777788888889999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhh---hhh--h---HHHHHHHHhhhccC-CchhhHHHHhhhcccccchhhHHHHHHHhhhh
Q 009409 180 KVLQTGVLIWSLATALLPLLA---GFM--P---GLVLSRVLVGIGEG-VSPSAATDLIARSIPLEERSRAVSFVFGGLSF 250 (535)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~---~~~--~---~l~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 250 (535)
+.++++..++.+..+++.... +.. | ..+++.++..++.+ +.-|..+-+.+|.+|++.|+.++++......+
T Consensus 336 pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~ 415 (485)
T KOG0569|consen 336 PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWL 415 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHH
Confidence 999999988887776654321 111 1 12334444333333 23578889999999999999999999999999
Q ss_pred HHHHHhhhHHHhccccchhHHHHHHHHHHH-HHHHHhhhcccCCCCC
Q 009409 251 GSVAGLLLAPPIIENLGWESVFYIFGLLGI-AWFSGFKILQEGETSN 296 (535)
Q Consensus 251 g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~-~~~~~~~~~~~~~~~~ 296 (535)
+..+-......+.+.+|- +.|++..+.++ ..+..+..+||++.+.
T Consensus 416 ~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 416 SNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 999999888888888776 56666666554 4456777788876544
No 167
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.32 E-value=1.1e-10 Score=115.85 Aligned_cols=171 Identities=15% Similarity=0.064 Sum_probs=125.8
Q ss_pred HHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 009409 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (535)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 419 (535)
.+.+..++...+.......+|.|..+ .+.+..+.+++.+...++.+++.++.|+++||+|+| .....+.+
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r---------~~~~~~~~ 72 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK---------KVMIGADL 72 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh---------HHHHHHHH
Confidence 34556667777777778888988865 699999999999999999999999999999999875 22222222
Q ss_pred HHHHHHHHhhhcC----CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009409 420 SPAVCMTLSSIDL----GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 495 (535)
Q Consensus 420 ~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 495 (535)
...+...+..... .+.+..++..++.|++.+...+.......+..++++|+++.|+.+....+|..++|.+++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 73 IRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222111111 134455566677788877777777778888889999999999999999999999999999999
Q ss_pred cccCcchHHHHHHHHHHHHHHHhhhh
Q 009409 496 DSTHSWSMSLFAPSIFFYLTGTIVWL 521 (535)
Q Consensus 496 ~~~g~~~~~~~~~~~~~~~~~~~~~~ 521 (535)
+.. +|...|.+.++..++..+..+.
T Consensus 153 ~~~-g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 153 ATL-GIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred HHh-hHHHHHHHHHHHHHHHHHHHHh
Confidence 887 4888887766655554444433
No 168
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.29 E-value=1.6e-11 Score=122.47 Aligned_cols=156 Identities=15% Similarity=0.127 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCC-chhhHH-HHHHHHHHH
Q 009409 117 GTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQT-GVLIWSLAT 193 (535)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~-r~~~~~-~~~~~~~~~ 193 (535)
..+.+..+........+....|. +.+++|.+..+.++..+.+.++..++.++.|++.||..+ |+.... .........
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~ 298 (379)
T TIGR00881 219 WYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVS 298 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHH
Confidence 34444445555555556666666 456689999999999999999999999999999998643 332222 111111111
Q ss_pred HHHHhh--hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHH
Q 009409 194 ALLPLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (535)
Q Consensus 194 ~~~~~~--~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 271 (535)
+..... ..+....+++.++.|+......+....++.|.+|+++|+++.|+.+....+|..++|.+.|.+.++.||++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 299 LLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGA 378 (379)
T ss_pred HHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccccc
Confidence 111111 233345566677778766666666778889999999999999999999999999999999999999999876
Q ss_pred H
Q 009409 272 F 272 (535)
Q Consensus 272 f 272 (535)
|
T Consensus 379 f 379 (379)
T TIGR00881 379 F 379 (379)
T ss_pred C
Confidence 4
No 169
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.29 E-value=3.4e-11 Score=114.72 Aligned_cols=175 Identities=22% Similarity=0.204 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHH
Q 009409 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (535)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (535)
...+++.|+..+.+.-.++..+|. +.+++|.+..+.|...+.+.+...+..+.+|+++||+|.+|+..+....++++..
T Consensus 220 ~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~ 299 (417)
T COG2223 220 TWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAA 299 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHH
Confidence 335677777777777788888888 7788999999999999999999999999999999999999999999888888887
Q ss_pred HHHhhh------hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc-
Q 009409 195 LLPLLA------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG- 267 (535)
Q Consensus 195 ~~~~~~------~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g- 267 (535)
+..... .+....++..+..+++.+.........+...++ ++-|.+.|+..+.+.+|+..-|...+...+..|
T Consensus 300 ~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~ 378 (417)
T COG2223 300 LLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS 378 (417)
T ss_pred HHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhccc
Confidence 776554 333333333333344444444456677777787 688999999999999999999999999998887
Q ss_pred hhHHHHHHHHHHHHHHHHhhhccc
Q 009409 268 WESVFYIFGLLGIAWFSGFKILQE 291 (535)
Q Consensus 268 w~~~f~~~~~~~~~~~~~~~~~~~ 291 (535)
+...|++...+.+++.+.......
T Consensus 379 ~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 379 YTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888877765555443
No 170
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.29 E-value=4.7e-11 Score=119.28 Aligned_cols=154 Identities=17% Similarity=0.099 Sum_probs=124.5
Q ss_pred HhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHH
Q 009409 127 NMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGL 206 (535)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l 206 (535)
......+....|.+.++.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+ ..++.+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~ 296 (382)
T PRK11128 218 QGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMG-STTALPWL 296 (382)
T ss_pred HHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-hhhhHHHH
Confidence 33344444555666678999999999999999999999999999999999999999999888877766654 56777888
Q ss_pred HHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHH-HhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHH
Q 009409 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (535)
Q Consensus 207 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~ 283 (535)
++..++.|++.+...+....++.+. +++++++.++... ....+|..+||.++|.+.+.+|+ ..|+..+++.++.+
T Consensus 297 ~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 297 IVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 8899999999998888888888886 5567788899886 55678889999999999999988 46666666655443
No 171
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.28 E-value=3.9e-10 Score=113.69 Aligned_cols=175 Identities=13% Similarity=0.056 Sum_probs=126.8
Q ss_pred HHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 009409 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (535)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 419 (535)
...+.+++...-...+....| .+++++|.+..+.|++.+...++..++.+..|++.||+|+| .....+.+
T Consensus 12 ~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r---------~~~~~~~~ 81 (412)
T TIGR02332 12 FLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR---------RWIAGIMV 81 (412)
T ss_pred HHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH---------HHHHHHHH
Confidence 334444444444445555566 66678999999999999999999999999999999999975 23334444
Q ss_pred HHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcc--
Q 009409 420 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS-- 497 (535)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~-- 497 (535)
+..+...+... .++...+++.-++.|++.+...+.....+.+.+++++|+++.|+.+....+|..+++.+++++.+.
T Consensus 82 ~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 160 (412)
T TIGR02332 82 LWGIASTATMF-ATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDG 160 (412)
T ss_pred HHHHHHHHHHH-hcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 44444443333 334555666677888888877766666677778889999999999999999999999999998752
Q ss_pred ---cCcchHHHHHHHHHHHHHHHhhhhhccC
Q 009409 498 ---THSWSMSLFAPSIFFYLTGTIVWLAFAS 525 (535)
Q Consensus 498 ---~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (535)
..+|+..|.+.++..++..++.++..++
T Consensus 161 ~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 161 LMALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred CCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 1259999998777666655555555443
No 172
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.28 E-value=6.4e-08 Score=96.94 Aligned_cols=273 Identities=11% Similarity=0.002 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCC-----CccchhHHHHHHHHHHHhh-hccchhhhcccCCchhhHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGW-----NSSVAGLVQSSFFWGYALS-QLPGGWLAKIFGGRKVLQTGVL 187 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----s~~~~~~~~s~~~~~~~~~-~~~~g~l~dr~g~r~~~~~~~~ 187 (535)
+-++.+.+.+|+..+..+..- .+.+.+.+ +...+.++.+...+...+. .++.+++++|++|++++-+...
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR----~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILR----DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 334344444544444444433 35555554 3467889998888877766 8999999999999999888777
Q ss_pred HHHHHHHHHHhh----hhh--------------------------hhHHHHHHHHhhhccCCchh-hHHHHhhhcccccc
Q 009409 188 IWSLATALLPLL----AGF--------------------------MPGLVLSRVLVGIGEGVSPS-AATDLIARSIPLEE 236 (535)
Q Consensus 188 ~~~~~~~~~~~~----~~~--------------------------~~~l~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~ 236 (535)
.+....+++++. .+. .|...+......+....... ..++++.|.++.+|
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 666665554433 011 12333444455555555555 78899999999999
Q ss_pred hhhHHHHHHHhhhhHHHHHhhhHHHhccc--------cchh----HHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcch
Q 009409 237 RSRAVSFVFGGLSFGSVAGLLLAPPIIEN--------LGWE----SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS 304 (535)
Q Consensus 237 r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~gw~----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (535)
-.+-.+++..+.++|.++++.+..++.+. ..|. ..+.+.++..++...+...+.+....++.... .+
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~ 241 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYN-PA 241 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccc-hh
Confidence 99999999999999999999998887631 1242 23344444444444444444332211111000 00
Q ss_pred hhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhh----HHHHHhh
Q 009409 305 NYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE----AAWVSIL 380 (535)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~----~g~~~~~ 380 (535)
+... ++..+..-...++.++++|.++.+.+...+++.....+....-..+.+.+- ++.+ .|.+...
T Consensus 242 ~~~~---------k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~ 311 (472)
T TIGR00769 242 LKEK---------KVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTW 311 (472)
T ss_pred hccc---------cCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
Confidence 0000 000000112346788999999988888888777766666555555655543 3322 2334445
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 009409 381 PPLASVLVTSIAAQFADNLIA 401 (535)
Q Consensus 381 ~~~~~~~~~~~~g~l~dr~~~ 401 (535)
.++..++..++.+++.+|+|-
T Consensus 312 ~gi~tl~~~l~~~~l~~~~Gw 332 (472)
T TIGR00769 312 TGVVSVTMMLLSGNVIRKYGW 332 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhhH
Confidence 555565666667888888874
No 173
>PRK15075 citrate-proton symporter; Provisional
Probab=99.27 E-value=3.2e-11 Score=122.59 Aligned_cols=150 Identities=15% Similarity=0.071 Sum_probs=107.0
Q ss_pred HHHHHHHHhhhhhhHhhhhhhhcc-cCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHH-HH
Q 009409 120 SLAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL-LP 197 (535)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~-~~ 197 (535)
++..+........+..+.|.+.++ +|++..+.++....+.++..++.+++|+++||+|||+++..+.++..+.... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 333444455555667778886554 8999999999988999999999999999999999999988765543322211 11
Q ss_pred h--hhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhh-hhHHHHHhhhHHHhccccchh
Q 009409 198 L--LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGL-SFGSVAGLLLAPPIIENLGWE 269 (535)
Q Consensus 198 ~--~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~g~~~~~~l~~~~gw~ 269 (535)
. ..+++..+.+..++.|++.+...+....++.|.+|++.|+..+++..... .+++.++|.+.+++.+..|++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 324 WLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 1 12232333344555566666666667788899999999999999965544 456788999999999988864
No 174
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.27 E-value=6.9e-10 Score=114.71 Aligned_cols=176 Identities=11% Similarity=0.062 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHH
Q 009409 338 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 417 (535)
Q Consensus 338 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 417 (535)
+..+.+..++...-...+...+|.+.. .+|.+..+.+++.+.+.++..++.+..|+++||+|+| .....+
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~-~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk---------~~l~~~ 77 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSM-TLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK---------RLLMLG 77 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHH
Confidence 344556666666666677888898875 6899999999999999999999999999999999865 333344
Q ss_pred HHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhcc-CCcchhHHHHHHHHhhhhhhhHHHHHHHHHhc
Q 009409 418 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVALTGYLLD 496 (535)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 496 (535)
.++..+...+... .++....+++-++.|++.+...+.....+.+.+ ++++|+++.|+......+|..+||.++|.+.+
T Consensus 78 ~~~~~~~~~~~~~-a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 78 GTLFGLASLAAAF-SPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4444443333333 344555666667788877766665555555555 67899999999999999999999999999999
Q ss_pred ccCcchHHHHHHHHHHHHHHHhhhhhccC
Q 009409 497 STHSWSMSLFAPSIFFYLTGTIVWLAFAS 525 (535)
Q Consensus 497 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (535)
.. +|++.|++...+.++..++.+...++
T Consensus 157 ~~-gwr~~f~i~~~~~~~~~~l~~~~l~~ 184 (495)
T PRK14995 157 HF-YWGSVFLINVPIVLVVMGLTARYVPR 184 (495)
T ss_pred cC-ChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 87 59999988776666555555444443
No 175
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.26 E-value=5.3e-10 Score=112.02 Aligned_cols=157 Identities=13% Similarity=0.097 Sum_probs=118.4
Q ss_pred HhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHH
Q 009409 348 GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL 427 (535)
Q Consensus 348 ~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (535)
.....+.....+|.+. +.+|.++.+.++..+...++..+++++.|++.||+|+| .....+.++.++...+
T Consensus 32 ~~~~~~~~~~~l~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr---------~~~~~~~~~~~~~~~~ 101 (394)
T PRK10213 32 LIIVEFLPVSLLTPMA-QDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR---------YVVILFAVLLTLSCLL 101 (394)
T ss_pred HHHHHHHHHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH---------HHHHHHHHHHHHHHHH
Confidence 3334445555677766 46899999999999999999999999999999999864 3333444444444333
Q ss_pred hhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHH
Q 009409 428 SSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFA 507 (535)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~ 507 (535)
... .++....++..++.|++.+...+.....+.+.+++++|+++.++.....++|..++|.+++.+.+.. +|+..|++
T Consensus 102 ~~~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~ 179 (394)
T PRK10213 102 VSF-ANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-GWRNVFNA 179 (394)
T ss_pred HHH-HChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CHHHHHHH
Confidence 333 2445555666677888877777777777778889999999999999999999999999999999988 49999988
Q ss_pred HHHHHHHHH
Q 009409 508 PSIFFYLTG 516 (535)
Q Consensus 508 ~~~~~~~~~ 516 (535)
.+++.++..
T Consensus 180 ~~~l~~~~~ 188 (394)
T PRK10213 180 AAVMGVLCI 188 (394)
T ss_pred HHHHHHHHH
Confidence 766554433
No 176
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.26 E-value=3e-10 Score=113.59 Aligned_cols=174 Identities=15% Similarity=0.050 Sum_probs=124.2
Q ss_pred HHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 009409 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (535)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 419 (535)
......++...........+|.+. +.+|.+..+.+++.+...++..++.++.|++.||+|+| .....+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r---------~~~~~~~~ 78 (385)
T TIGR00710 9 LLGCLSILGPLGIDMYLPAFPEIA-ADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR---------PVLLLGLF 78 (385)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh---------HHHHHHHH
Confidence 333344444445555556677665 56899999999999999999999999999999999865 22223333
Q ss_pred HHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccC
Q 009409 420 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH 499 (535)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 499 (535)
...+....... .++....++..++.|++.+...+.......+..++++|+++.|+.+....+|..++|.++|.+.+..
T Consensus 79 ~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~- 156 (385)
T TIGR00710 79 IFALSSLGLAL-SNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL- 156 (385)
T ss_pred HHHHHHHHHHH-HccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 33333333332 2334445555667777777666777777778788999999999999999999999999999999987
Q ss_pred cchHHHHHHHHHHHHHHHhhhhhccC
Q 009409 500 SWSMSLFAPSIFFYLTGTIVWLAFAS 525 (535)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (535)
+|...+.+.+++.++..++.+...++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (385)
T TIGR00710 157 SWHAIFAFLSLAGILLSALIFFILPE 182 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 48888887776665555555444443
No 177
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.26 E-value=1.3e-10 Score=111.97 Aligned_cols=160 Identities=11% Similarity=0.057 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhhhhhc---ccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 116 IGTTSLAFVICNMDKVNLSVAIIPMSH---RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
+.+..+..|+.......+..+.+.+.+ .+|++..+.++..+.+..++.++.++.+++.||+|+|+++.++..+..++
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~ 221 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 333444554444455566666676554 36999999999999999999999999999999999999988887776666
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHH
Q 009409 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (535)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f 272 (535)
.++.. ..+. ......-++.|++.+..+|...+...+..++ +.+.+.++. ....+|.+++|++.|.+.+..|.+..|
T Consensus 222 ~~l~~-~~~~-~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~ 297 (310)
T TIGR01272 222 SIGAA-LTHG-YVAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAF 297 (310)
T ss_pred HHHHH-HcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHH
Confidence 64443 3333 2233466688999999999999999888874 456667775 567799999999999999999999998
Q ss_pred HHHHHHH
Q 009409 273 YIFGLLG 279 (535)
Q Consensus 273 ~~~~~~~ 279 (535)
++..+..
T Consensus 298 ~v~~~~~ 304 (310)
T TIGR01272 298 ALPVPCY 304 (310)
T ss_pred HHHHHHH
Confidence 8654443
No 178
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.26 E-value=1.6e-10 Score=116.87 Aligned_cols=180 Identities=17% Similarity=0.128 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhh-hhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCc--hhhHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR--KVLQTGVLIW 189 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~~~~ 189 (535)
.+.+....+++++..-+.+++... ...-.+++|++..+...+.-+..+..++|.+++|++.||+|.| +++.++++++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 344445555665555455555444 4445568999999999999999999999999999999999999 8988888887
Q ss_pred HHHHHHHHhh--------hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHH
Q 009409 190 SLATALLPLL--------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPP 261 (535)
Q Consensus 190 ~~~~~~~~~~--------~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 261 (535)
.+..+.. .+ .++.+.+.+.-++.|++.|..++..-++.++..|+++.+..+|++....-..+.+||++.+.
T Consensus 360 ~~i~~~g-~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~ 438 (477)
T PF11700_consen 360 IIIPLYG-LFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGL 438 (477)
T ss_pred HHHHHHH-HHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555443 33 45557889999999999999999999999999999999999999999999999999999999
Q ss_pred hccccc-hhHHHHHHHHHHHHHHHHhhhcccCC
Q 009409 262 IIENLG-WESVFYIFGLLGIAWFSGFKILQEGE 293 (535)
Q Consensus 262 l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~~~ 293 (535)
+.+..| -|+.++...++.++.+++...++.++
T Consensus 439 i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 439 ITDATGSQRYGFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HHHHhCCchhHHHHHHHHHHHHHHHHhhccchh
Confidence 998876 89999988888777777776665544
No 179
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.26 E-value=1.4e-10 Score=117.91 Aligned_cols=146 Identities=13% Similarity=0.055 Sum_probs=108.9
Q ss_pred hhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhh-hhHHHHHH
Q 009409 132 NLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF-MPGLVLSR 210 (535)
Q Consensus 132 ~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~ 210 (535)
.+...+|.+.++.|.+..+.+.+.+...++..++.+++|++.||+|||+.+..+.++..+..++.....+. ...+.+..
T Consensus 249 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (426)
T PRK12307 249 PIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACL 328 (426)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 34556777777789999999999999999999999999999999999999988877765554443222222 12222222
Q ss_pred HHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHH
Q 009409 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (535)
Q Consensus 211 ~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 277 (535)
+..+++.....+....++.|.+|++.|++++|+......+|..++|.+.+++.+..|+....++...
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~ 395 (426)
T PRK12307 329 FGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVA 395 (426)
T ss_pred HHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 2233333334455667889999999999999999999999999999999999999887655444333
No 180
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.26 E-value=2.2e-08 Score=99.00 Aligned_cols=371 Identities=12% Similarity=0.031 Sum_probs=207.6
Q ss_pred HHHHHHHHHHHHHhhhhhhHhhhhhhhcccC-CCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHH---
Q 009409 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFG-WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS--- 190 (535)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~--- 190 (535)
....+.+.++++..+.-++..+.|.+..+.. -+.--.+...-.-.+..+++.+..|.+.||..|.++...+.+.--
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV 82 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence 3446677888888888888888888666652 233333334444445666788888999999999998776654321
Q ss_pred -HHHHHHHh-hh--h-----h--hhHHHHHHHHhhhccCCchh-hHHHHhhhcc------cccchhhHHHHHHHhhhhHH
Q 009409 191 -LATALLPL-LA--G-----F--MPGLVLSRVLVGIGEGVSPS-AATDLIARSI------PLEERSRAVSFVFGGLSFGS 252 (535)
Q Consensus 191 -~~~~~~~~-~~--~-----~--~~~l~~~~~~~G~~~~~~~~-~~~~~~~~~~------~~~~r~~~~~~~~~~~~~g~ 252 (535)
+++.+... +. . . ...+++.-.+.|........ ...+.=-||. +++.+.+..+...-.--+..
T Consensus 83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck 162 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK 162 (432)
T ss_pred HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence 11111111 11 1 1 11122222222221111111 1111112332 34566777888888888999
Q ss_pred HHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhc--------ccCCCCCCCCCCcchhhhh---hhhhhhhhHHHhc
Q 009409 253 VAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL--------QEGETSNGATLAPRSNYIN---MKKSLSASLEEMG 321 (535)
Q Consensus 253 ~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 321 (535)
+++|++.|.+.+..+.+...++.++..++.++.=.++ |+-..++..+..+..+... .++..........
T Consensus 163 llaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (432)
T PF06963_consen 163 LLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLW 242 (432)
T ss_pred HHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHH
Confidence 9999999999998899988888887776654332221 1111111110000000000 0000000000000
Q ss_pred c--CCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 009409 322 E--SLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (535)
Q Consensus 322 ~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 399 (535)
+ ......|+..++++.+....-. .+.++...++...+..|+... |+++...|..-....+.++.|.++..++.+|+
T Consensus 243 ~~~~~~~~~w~~Y~~q~vflas~al-alLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri 320 (432)
T PF06963_consen 243 NPLRTIIRGWRTYFRQPVFLASFAL-ALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI 320 (432)
T ss_pred HHHHHHhccHHHHHhCHHHHHHHHH-HHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 0112356677777755544433 333444566778888899765 99999999999999999999999999999999
Q ss_pred HHcCCCchhHHHHHHHHH--HHHHHHHHHHhhhcCCCc--HHH----HHHHHHHHHHHhhhhhhhhhhhhhccCCcchhH
Q 009409 400 IATGVETTMVRKICQTIA--FLSPAVCMTLSSIDLGLP--HWE----IVGILTAGLALSSFALSGLYCTHQDISPEYASI 471 (535)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 471 (535)
|..| .-...+. ......+...+ +..+++ ... +.+..+-=++.-++-.......++.+|+++||+
T Consensus 321 Glvr-------~G~~~l~~q~~~L~~~v~~~-~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~ 392 (432)
T PF06963_consen 321 GLVR-------AGLWSLWWQWVCLALCVVSF-WAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGA 392 (432)
T ss_pred cchh-------hHHHHHHHHHHHHHHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhH
Confidence 8542 1111111 11111111111 222222 111 112222223444455666667778899999999
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHHhc
Q 009409 472 LLGITNTVGAVPGIVGVALTGYLLD 496 (535)
Q Consensus 472 ~~g~~~~~~~lg~~igp~i~G~l~~ 496 (535)
..|+-+...++...+.-.+ +.+..
T Consensus 393 v~gvq~sl~~lf~ll~~~~-~ii~~ 416 (432)
T PF06963_consen 393 VSGVQNSLQSLFELLSFVL-TIIFP 416 (432)
T ss_pred HHHHHHHHHHHHHHHHHHH-HhccC
Confidence 9999999999887765544 44443
No 181
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.26 E-value=4.2e-10 Score=111.75 Aligned_cols=159 Identities=14% Similarity=0.147 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHH
Q 009409 337 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI 416 (535)
Q Consensus 337 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 416 (535)
.+|...+..++.....+....+.|.++++.+|++..+.+++.+...++..++.++.|+++||+|+| .....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~ 72 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR---------YTTTL 72 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch---------HHHHH
Confidence 355666777777777788889999878888999999999999999999999999999999999865 22333
Q ss_pred HHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhc
Q 009409 417 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD 496 (535)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 496 (535)
+.+...+...+......+....++..++.|++.+. .......+.+..++++|+++.++.....++|..+++.+++.+.+
T Consensus 73 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 73 SLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 33433433333333221334444555666666443 34455566677888999999999998888888888888877665
Q ss_pred c---------cCcchHHH
Q 009409 497 S---------THSWSMSL 505 (535)
Q Consensus 497 ~---------~g~~~~~~ 505 (535)
. ..+|...+
T Consensus 152 ~~~~~~~~~~~~~w~~~~ 169 (366)
T TIGR00886 152 SLIFGAGLPAHLAWGWAF 169 (366)
T ss_pred HHHhcccccccccccchh
Confidence 2 11477777
No 182
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.25 E-value=7.7e-10 Score=111.02 Aligned_cols=179 Identities=9% Similarity=0.054 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHH
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 415 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 415 (535)
|-+....+..+....+.......+|.+.+ .+|.+..+.++..+...++..++.++.|+++||+|+| ....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r---------~~l~ 72 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAA-DLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK---------PVAI 72 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh---------HHHH
Confidence 34444555566666666666778888775 5799999999999999999999999999999999865 2233
Q ss_pred HHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009409 416 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 495 (535)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 495 (535)
.+.+...+...+... .++....++..++.|.+.+.........+.+..++++|+++.|+.+....++..++|.+++.+.
T Consensus 73 ~~~~~~~i~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~ 151 (392)
T PRK10473 73 PGAALFIIASLLCSL-AETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM 151 (392)
T ss_pred HHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333332 2333444555566777766666666667777788999999999999999999999999999988
Q ss_pred cccCcchHHHHHHHHHHHHHHHhhhhhccCC
Q 009409 496 DSTHSWSMSLFAPSIFFYLTGTIVWLAFASS 526 (535)
Q Consensus 496 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (535)
+.. +|...+.+.+++.++..++.+...+++
T Consensus 152 ~~~-g~~~~~~~~~~~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 152 LKF-PWQSLFYTMAAMGILVLLLSLFILKET 181 (392)
T ss_pred hCc-ChHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 876 588888887766665555544444433
No 183
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.25 E-value=1.1e-10 Score=120.43 Aligned_cols=167 Identities=11% Similarity=-0.022 Sum_probs=122.6
Q ss_pred HHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhh-
Q 009409 123 FVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG- 201 (535)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~- 201 (535)
.+....+.+....+.|.+.++.|.+....++......+...++.+++++++||+|||++++.+.++.+++.+++.....
T Consensus 280 ~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~ 359 (479)
T PRK10077 280 VFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT 359 (479)
T ss_pred HHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc
Confidence 3334444555566778888899999888888888888889999999999999999999999999888887766543211
Q ss_pred hh--hHHHHHHHHhhhccCC-chhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHh------ccccchhHHH
Q 009409 202 FM--PGLVLSRVLVGIGEGV-SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI------IENLGWESVF 272 (535)
Q Consensus 202 ~~--~~l~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l------~~~~gw~~~f 272 (535)
+. .....+.++.+++.+. ..|....+++|.+|+++|++++|+......+|.++++.+.+.+ .+..+|++.|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~ 439 (479)
T PRK10077 360 QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSY 439 (479)
T ss_pred CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHH
Confidence 11 1222333444444333 3367789999999999999999999999999998886665544 4578899999
Q ss_pred HHHHHHHHHHHHHhhhc
Q 009409 273 YIFGLLGIAWFSGFKIL 289 (535)
Q Consensus 273 ~~~~~~~~~~~~~~~~~ 289 (535)
++.++++++..+..+++
T Consensus 440 ~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 440 WIYGCMGVLAALFMWKF 456 (479)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99887766655544433
No 184
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.25 E-value=4.7e-10 Score=112.11 Aligned_cols=177 Identities=14% Similarity=0.174 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHH
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 415 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 415 (535)
+.++.+.+..++.....+.....+|.+.+ ++|.+..+.+++.+...++..++.++.|++.||+|+| ....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r---------~~~~ 72 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAH-DVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK---------HILL 72 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHH-HcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH---------HHHH
Confidence 45667777778888888888888988764 6899999999999999999999999999999999864 2333
Q ss_pred HHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009409 416 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 495 (535)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 495 (535)
.+.+..++...+... .++....++..++.|++.+...+.......+..++++|+++.|+......+|..++|.+++.+.
T Consensus 73 ~~~~~~~~~~~l~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 73 FLVALCVIGNAMFTL-SSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred HHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 444444444444333 3345555666677777766655555555666678888999999999999999999999999999
Q ss_pred cccCcchHHHHHHHHHHHHHHHhhhhhcc
Q 009409 496 DSTHSWSMSLFAPSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 496 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (535)
+.. +|+..|.+.++..++..+..+...+
T Consensus 152 ~~~-gwr~~f~~~~~~~~~~~~~~~~~lp 179 (382)
T PRK10091 152 QEF-SWRYTFLLIAVFNIAVLASIYFWVP 179 (382)
T ss_pred hhc-cHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 887 4999998877755555444433333
No 185
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.25 E-value=1.5e-10 Score=113.06 Aligned_cols=180 Identities=12% Similarity=0.062 Sum_probs=132.7
Q ss_pred HhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHH
Q 009409 331 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR 410 (535)
Q Consensus 331 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 410 (535)
+++.++.+..+.+...+..++...+.+++=-++++ ++..+..-|...+....+.++.-++.+++.+|+|+-++
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v------ 438 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNV------ 438 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccce------
Confidence 45667777777777777777777788888777764 57777788888888889999999999999999986432
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhh-hhhhhHHHH
Q 009409 411 KICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVG-AVPGIVGVA 489 (535)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~lg~~igp~ 489 (535)
+.+++..-..-++.+.. ..++|..+..-++-|+..+.++.....++....||+.++++.|+..... ++|-.+|++
T Consensus 439 ---~~lgLa~~~~Rf~~~S~-L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gsl 514 (618)
T KOG3762|consen 439 ---MYLGLACNVGRFLYYSY-LQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSL 514 (618)
T ss_pred ---eeehhhHHHHHHHHHHH-hcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhh
Confidence 22333333333333333 4555655666688888899999999999999999999999999988554 889999999
Q ss_pred HHHHHhcccCcchHHHHHHHHHHHHHHHhhhhh
Q 009409 490 LTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 490 i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 522 (535)
++|.+.+.+| ....|.+.++.+++..++...+
T Consensus 515 IGG~~v~~fg-~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 515 IGGFVVERFG-ARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred hhhhhheeeh-hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999985 5666666555555444443333
No 186
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.25 E-value=9.1e-11 Score=120.00 Aligned_cols=158 Identities=20% Similarity=0.128 Sum_probs=136.0
Q ss_pred hhhhhHhhhhhhh-cccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHH
Q 009409 129 DKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (535)
Q Consensus 129 ~~~~~~~~~~~~~-~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (535)
....+...+|.+. +++|.+...+|++.+++.+|..++.++.+++.+|+++++++..+.++++++.+.++ +.++.+..+
T Consensus 233 ~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~la-l~~~~~~~~ 311 (524)
T PF05977_consen 233 FASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLA-LSPSFWLAL 311 (524)
T ss_pred hhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHh-cchHHHHHH
Confidence 3334445577754 56899999999999999999999999999999999999999999998888887775 666778888
Q ss_pred HHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhh
Q 009409 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFK 287 (535)
Q Consensus 208 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 287 (535)
+..++.|++.........+.+....|++.||++++++.+....+..+|.++.|.+.+.+|.+..+.+.++..++..++..
T Consensus 312 ~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 312 IALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999988888999999999999999999999999999999999999999999999999887776555444433
No 187
>PRK11043 putative transporter; Provisional
Probab=99.25 E-value=5.9e-10 Score=112.24 Aligned_cols=169 Identities=11% Similarity=0.005 Sum_probs=116.3
Q ss_pred HHHHHHHhhhhHHHHHhhHHH--HHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 009409 342 IYAHFCGSWGHYTCLSWLPTY--FSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (535)
Q Consensus 342 ~l~~~~~~~~~~~~~~~~p~~--l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 419 (535)
.+..+...........+.|.+ +.+.+|.++.+.+++.+...++..++.++.|+++||+++| ..+..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~~ 79 (401)
T PRK11043 9 VYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK---------PVLLAGLS 79 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc---------HHHHHHHH
Confidence 333333444445555555554 4567899999999999999999999999999999999875 22223333
Q ss_pred HHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccC
Q 009409 420 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH 499 (535)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 499 (535)
...+...+... .++.....+..++.|++.+...........+.+++++++.+.+..+....++..++|.++|++.+..
T Consensus 80 ~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~- 157 (401)
T PRK11043 80 LFALGSLGMLW-VESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF- 157 (401)
T ss_pred HHHHHHHHHHH-hcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 33333333222 2333444455566666655545544555667788888999999999999999999999999999988
Q ss_pred cchHHHHHHHHHHHHHHHhhhh
Q 009409 500 SWSMSLFAPSIFFYLTGTIVWL 521 (535)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~ 521 (535)
+|...|++.+++.++..++.+.
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 158 GWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred ChHHHHHHHHHHHHHHHHHHHH
Confidence 4888888777666555544443
No 188
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.24 E-value=4e-10 Score=116.56 Aligned_cols=174 Identities=13% Similarity=0.150 Sum_probs=129.7
Q ss_pred HHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 009409 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (535)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 419 (535)
.+.+..++...........+|.+.+ .+|.+..+.+++.+...++..++.++.|++.||+|+| .....+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~~ 75 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAG-DLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR---------RLFLISTF 75 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH---------HHHHHHHH
Confidence 3445555555555667777887775 6899999999999999999999999999999999864 23333333
Q ss_pred HHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccC
Q 009409 420 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH 499 (535)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 499 (535)
...+...+... .++....++..++.|++.+...+.....+.+.+++++|+++.|+.+....+|..++|.++|++.+..
T Consensus 76 ~~~~~~~~~~~-~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~- 153 (485)
T TIGR00711 76 AFTLGSLLCGV-APNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY- 153 (485)
T ss_pred HHHHHHHHHhC-cCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-
Confidence 33333333333 2345556666777888877777777778888889999999999999999999999999999999987
Q ss_pred cchHHHHHHHHHHHHHHHhhhhhccC
Q 009409 500 SWSMSLFAPSIFFYLTGTIVWLAFAS 525 (535)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (535)
+|...|++.+.+.++..++.+...++
T Consensus 154 ~w~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 154 HWRWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred CceehhhhhhHHHHHHHHHHHHHcCC
Confidence 48888887766555555544444443
No 189
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.24 E-value=2.9e-11 Score=123.29 Aligned_cols=149 Identities=16% Similarity=0.189 Sum_probs=114.8
Q ss_pred HHHHHHHHHhhhhhhHhhhhhhhcc-cCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHH
Q 009409 119 TSLAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (535)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (535)
+++..++............+.+.++ ++ +..+.+++.++..++..++.+++++++||+|+|+++..+.++.+++.++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~ 305 (437)
T TIGR00792 227 LCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFF 305 (437)
T ss_pred HHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444443 44 566778888888999999999999999999999999999888777776654
Q ss_pred hhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhccc-------ccchhhHHHHHHHhhhhHHHHHhhhHHHhccccch
Q 009409 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (535)
Q Consensus 198 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (535)
...++.+.+++..++.|++.+...+...++++|..+ ++.+|..+|+.+....+|..+++.+.|.+.+..||
T Consensus 306 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 306 FAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 433455667778888999999889999999988865 45679999999999999999999999999887666
No 190
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.24 E-value=1.3e-10 Score=118.19 Aligned_cols=163 Identities=15% Similarity=0.080 Sum_probs=105.5
Q ss_pred HhhhhhhHhhhhhh-hcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHh-h--hhh
Q 009409 127 NMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL-L--AGF 202 (535)
Q Consensus 127 ~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~--~~~ 202 (535)
......+..++|.+ .+++|.+..+.++..++..+...+++++.|+++||+|||+++.++.++.++....... . .++
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSS 335 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 44445566677774 4668999999999999888888899999999999999999887765544333321111 1 122
Q ss_pred hhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhh-HHHHHhhhHHHhccccc-hhHHHHHHHHHHH
Q 009409 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIENLG-WESVFYIFGLLGI 280 (535)
Q Consensus 203 ~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~ 280 (535)
....+..-.+.+++.+...+....+++|++|++.|++++|+.+....+ .....|.+.+.+ +..| |...+++.++..+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~ 414 (432)
T PRK10406 336 PYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAV 414 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHH
Confidence 222222222222333333455677889999999999999998876554 344577877755 4445 6556666666665
Q ss_pred HHHHHhhhcc
Q 009409 281 AWFSGFKILQ 290 (535)
Q Consensus 281 ~~~~~~~~~~ 290 (535)
+..+..++++
T Consensus 415 i~~~~~~~l~ 424 (432)
T PRK10406 415 VAFLVSLMLH 424 (432)
T ss_pred HHHHHHHHhh
Confidence 5555555443
No 191
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.23 E-value=6.6e-10 Score=109.82 Aligned_cols=163 Identities=13% Similarity=0.033 Sum_probs=117.7
Q ss_pred hhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhh
Q 009409 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 429 (535)
Q Consensus 350 ~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (535)
.....+...+|.+.+ ++|.+..+.|++.+...++..++.+..|+++||+|+| +. ...............
T Consensus 5 ~~~~~~~~~lp~i~~-~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr--------~~-~~~~~~~~~~~~~~~- 73 (368)
T TIGR00903 5 AIWVTFSPVLSLVAE-DIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR--------WF-LFGSLATFAAAAGRL- 73 (368)
T ss_pred HHHHHHHhhHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch--------HH-HHHHHHHHHHHHHHH-
Confidence 344556677777765 6899999999999999999999999999999999854 22 222222222221111
Q ss_pred hcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHH
Q 009409 430 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPS 509 (535)
Q Consensus 430 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~ 509 (535)
....+....++.-++.|++.+. .........+..|+++|++++++.+....+|..+++.+++.+.+.. +|+..|++.+
T Consensus 74 ~~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~ 151 (368)
T TIGR00903 74 LDPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIA 151 (368)
T ss_pred HHhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHH
Confidence 1113445566667777777664 3444445567789999999999999999999999999999999887 5999998877
Q ss_pred HHHHHHHHhhhhhccC
Q 009409 510 IFFYLTGTIVWLAFAS 525 (535)
Q Consensus 510 ~~~~~~~~~~~~~~~~ 525 (535)
++.++..++.+...++
T Consensus 152 ~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 152 AVAAAGIILVLAALPA 167 (368)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 7666666655555544
No 192
>TIGR00895 2A0115 benzoate transport.
Probab=99.23 E-value=6.7e-11 Score=118.80 Aligned_cols=142 Identities=20% Similarity=0.196 Sum_probs=114.6
Q ss_pred HHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhh
Q 009409 120 SLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (535)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 199 (535)
.+..+...........+.|.+.+++|.+..+.++..+...++..++.+++|++.||+|+|+..... .+.++...+....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ 334 (398)
T TIGR00895 256 WLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLL-LLGAVFAVLVGST 334 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH-HHHHHHHHHHHHH
Confidence 333444445555566677888889999999999999999999999999999999999999554444 3334443333333
Q ss_pred hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHh
Q 009409 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (535)
Q Consensus 200 ~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (535)
.++.+.+++..++.|++.+...+...+++.+.+|+++|++++|+......+|..+||.++|++
T Consensus 335 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 335 LFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 445567778889999999999999999999999999999999999999999999999999876
No 193
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.22 E-value=1.5e-10 Score=117.80 Aligned_cols=176 Identities=20% Similarity=0.194 Sum_probs=153.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccC--CchhhHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG--GRKVLQTGVLIWSL 191 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~~ 191 (535)
+.+..+.+...+..++..+....+|.+.++.|.+..+...+.++..+...++.++.|+++|+.. ++.+..+++++.++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 4556666777777888888888999999999999999999999999999999999999999988 45556666666666
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc-hhH
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WES 270 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~ 270 (535)
+.+.. ...++++.++..-.+.|++.|........++.|..+.++...+.|+.....+++.++||+++|.+.+..| |..
T Consensus 378 ~~~~~-p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 378 ARLFL-PFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeee
Confidence 66555 4677779999999999999999988888899999999999999999999999999999999999998877 999
Q ss_pred HHHHHHHHHHHHHHHhhhcc
Q 009409 271 VFYIFGLLGIAWFSGFKILQ 290 (535)
Q Consensus 271 ~f~~~~~~~~~~~~~~~~~~ 290 (535)
.|+..++..++....++..+
T Consensus 457 ~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ehhhcChHHHHHHHHHHHhH
Confidence 99999998887776666666
No 194
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.20 E-value=1.1e-10 Score=117.56 Aligned_cols=151 Identities=14% Similarity=0.150 Sum_probs=106.8
Q ss_pred hhhhhcccCCCccchhHHHHHHH-HHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHH---HhhhhhhhHHHHHHH-
Q 009409 137 IIPMSHRFGWNSSVAGLVQSSFF-WGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL---PLLAGFMPGLVLSRV- 211 (535)
Q Consensus 137 ~~~~~~~~g~s~~~~~~~~s~~~-~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~- 211 (535)
.+.+.+++|++..+++++.+... ++..++.+++|++.||+|+|+.+..+.++..+..+.. +...++.+.+++.-+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 34567779999999999987654 5688999999999999999998877766655544332 122234444444443
Q ss_pred ---HhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhh
Q 009409 212 ---LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (535)
Q Consensus 212 ---~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 288 (535)
..|++.+...+....++.+.+|.+ ..++.....++|..+++.++|.+.+..||+..|.+.++++++.++....
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSAT----QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 455555566666666777766644 4456666667888777789999999999999999988888776655544
Q ss_pred ccc
Q 009409 289 LQE 291 (535)
Q Consensus 289 ~~~ 291 (535)
.+.
T Consensus 389 ~~~ 391 (402)
T PRK11902 389 MRG 391 (402)
T ss_pred Hhh
Confidence 443
No 195
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.20 E-value=1.4e-10 Score=116.53 Aligned_cols=141 Identities=12% Similarity=0.056 Sum_probs=115.7
Q ss_pred cCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhh
Q 009409 144 FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSA 223 (535)
Q Consensus 144 ~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~ 223 (535)
.+.+....|++.++..+...++.+..|++.||+|+|+.+.++.++.++...+.. ..++.+.+++.+++.|++.......
T Consensus 249 ~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 249 PQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSS-FATTALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH-hcCChHHHHHHHHHHHHHHHHHHHH
Confidence 355667789999999999999999999999999999999999888888776654 4566677888899999987665555
Q ss_pred HHHHhhhcccccchhhHHHH-HHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHH
Q 009409 224 ATDLIARSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG 285 (535)
Q Consensus 224 ~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~ 285 (535)
...+..+..+++.++...+. ++....+|.+++++++|++.+..||+..|++.+++.++..+.
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 66677777777777776666 678899999999999999999999999999998887665444
No 196
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.20 E-value=7.3e-10 Score=110.98 Aligned_cols=163 Identities=16% Similarity=0.145 Sum_probs=117.8
Q ss_pred cHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHH
Q 009409 335 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 414 (535)
Q Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 414 (535)
+|.++.+.+..++..++........+.+. ..++.+..+.+++.+...+...++.++.|+++||+++|+. +
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~v---------l 71 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALL-KELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRV---------M 71 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchh---------h
Confidence 35566777777777776665666666665 4678899999999999999999999999999999998732 1
Q ss_pred HHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHH
Q 009409 415 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL 494 (535)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l 494 (535)
..+.++..+......... + . ++..++.|++.+...+.....+.+.+|+++|++++|+.+....+|..+||.++|.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~-~-~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 72 FIANGIKLLGCLLMLFGI-H-P--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-H-H--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222221111111111 1 1 34456678888888888888888889999999999999999999999999999999
Q ss_pred hcccCcchHHHHHHHHHHH
Q 009409 495 LDSTHSWSMSLFAPSIFFY 513 (535)
Q Consensus 495 ~~~~g~~~~~~~~~~~~~~ 513 (535)
.+.. +...+.+.+.+.+
T Consensus 148 ~~~~--~~~~~~i~~~~~~ 164 (393)
T PRK11195 148 ADPH--AEAALAVCALIYL 164 (393)
T ss_pred HHHH--HHHHHHHHHHHHH
Confidence 9863 5656655544333
No 197
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.19 E-value=7.1e-10 Score=106.43 Aligned_cols=393 Identities=11% Similarity=0.036 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcc----cCCchhhHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKVLQTGVLIW 189 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~g~r~~~~~~~~~~ 189 (535)
+.++.++...+...+++..=..+.+++.+++|++....+.+.-...+...+.+++.|..+|| +||||.++....+.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 44445555555666777777778888999999999999999999999999999999999996 89888877655443
Q ss_pred -HHHHHHHHhhhhhhh-----------------HHHHHHHHhhhccCCchhhHHHHhhhcccccchhh-HHHHHHHhhhh
Q 009409 190 -SLATALLPLLAGFMP-----------------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR-AVSFVFGGLSF 250 (535)
Q Consensus 190 -~~~~~~~~~~~~~~~-----------------~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~ 250 (535)
+++.+++. .+.++. .+++...+.=++.-.....+-+++.|....+++.+ +++.+.....+
T Consensus 112 i~~~l~Lig-~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av 190 (498)
T KOG0637|consen 112 IAVSLFLIG-YAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV 190 (498)
T ss_pred HHHHHhhhh-hHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh
Confidence 44444443 333322 23344444445666778888999999997777766 99999999999
Q ss_pred HHHHHhhhHHHhcccc--c---hhHHHHHHHHHHHHHHH-HhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCC
Q 009409 251 GSVAGLLLAPPIIENL--G---WESVFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESL 324 (535)
Q Consensus 251 g~~~g~~~~~~l~~~~--g---w~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (535)
|+.+|-.++++.--+. . -+.++..+...-...+. +.+...++... .....+++. ..+. .+.+.+.
T Consensus 191 GnvLGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~-l~~~~~~~~--s~~~------~~~~~~~ 261 (498)
T KOG0637|consen 191 GNVLGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSES-LWYPQEKPL--SPKG------TTARSKS 261 (498)
T ss_pred cceeeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccc-cccccccCC--CCCc------ccccccc
Confidence 9999988887443211 1 11222222222111111 11111111100 000000000 0000 0000000
Q ss_pred CCC-----cHHHh-hhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHH-HhCCChhh----------------HHHHHhhH
Q 009409 325 KDV-----PWKAI-FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE-ELSLNLTE----------------AAWVSILP 381 (535)
Q Consensus 325 ~~~-----~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~~----------------~g~~~~~~ 381 (535)
.+. .+..+ ...|..+.+.+...+...+.+.+.-|...++-+ .|+-++.. ..+-..+.
T Consensus 262 ~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~in 341 (498)
T KOG0637|consen 262 SKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLN 341 (498)
T ss_pred cCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHH
Confidence 000 01111 224678888888888888888888777777733 34432211 12334566
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhh-------c---CCCcHHHHHHHH-HHHHHHh
Q 009409 382 PLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI-------D---LGLPHWEIVGIL-TAGLALS 450 (535)
Q Consensus 382 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~~~~~~-~~g~~~~ 450 (535)
.+...+.+....++.+|+|.|++............++............ . .....+..+..+ ..+.-..
T Consensus 342 s~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a 421 (498)
T KOG0637|consen 342 SIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLA 421 (498)
T ss_pred HHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCccc
Confidence 6667777888889999998654433221111111111110000000000 0 000000010000 0110000
Q ss_pred hhhhhhhhhhhh-cc--CCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Q 009409 451 SFALSGLYCTHQ-DI--SPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT 517 (535)
Q Consensus 451 ~~~~~~~~~~~~-~~--~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~ 517 (535)
. .......... .. ....+|...|+.|..-.+..++.....|.+.+..|+-+..-+..++..++++.
T Consensus 422 ~-t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~~ 490 (498)
T KOG0637|consen 422 I-TFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIGG 490 (498)
T ss_pred c-ccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHHH
Confidence 0 0000000010 01 11224778888888888999998888899999887665555554444444433
No 198
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.19 E-value=2.9e-10 Score=112.82 Aligned_cols=169 Identities=18% Similarity=0.234 Sum_probs=133.1
Q ss_pred HHHHHHHHHhhhhhhHhhhhhhhcccC-CCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHH
Q 009409 119 TSLAFVICNMDKVNLSVAIIPMSHRFG-WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (535)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (535)
..+..++.+.....+..+.+.+.++.| .+....+.+.++..++-++.-...+++..|+|.|+++.++.+.+++=..+.+
T Consensus 212 Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 212 FLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 334445666777777888888888888 7888888888888888888889999999999999999999999888887776
Q ss_pred hhhhhhhHHHHH----HHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHh-hhhHHHHHhhhHHHhccccchhH--
Q 009409 198 LLAGFMPGLVLS----RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGG-LSFGSVAGLLLAPPIIENLGWES-- 270 (535)
Q Consensus 198 ~~~~~~~~l~~~----~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~~~~gw~~-- 270 (535)
..+++.+...+. ..+.|+..+..+.....++.+..|++.|+++++++.+. .++|.++|.+++|++.+++|-+.
T Consensus 292 ~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~ 371 (400)
T PF03825_consen 292 YFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMF 371 (400)
T ss_pred HhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhh
Confidence 554543443333 45699999999999999999999999999999998875 67999999999999999877543
Q ss_pred ----HHHHHHHHHHHHHHHhh
Q 009409 271 ----VFYIFGLLGIAWFSGFK 287 (535)
Q Consensus 271 ----~f~~~~~~~~~~~~~~~ 287 (535)
.+.+.+++.++..+.+.
T Consensus 372 ~~~~~~~v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 372 DWSAVFLVFAVMALVILVLFV 392 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444433333
No 199
>TIGR00898 2A0119 cation transport protein.
Probab=99.19 E-value=7.4e-11 Score=122.63 Aligned_cols=151 Identities=17% Similarity=-0.033 Sum_probs=114.2
Q ss_pred hhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHhhhcc
Q 009409 139 PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGE 217 (535)
Q Consensus 139 ~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~G~~~ 217 (535)
...++++.+. .+...+..+...++.++.+++.||+|||+.+.++.++.+++.++.....+. .+..++..++.+++.
T Consensus 348 ~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 424 (505)
T TIGR00898 348 LDLGNLGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGI 424 (505)
T ss_pred ccccccCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Confidence 3444455443 233344556667788899999999999999999988888777666543332 134455556667777
Q ss_pred CCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhcccCCC
Q 009409 218 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET 294 (535)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 294 (535)
+...+....+.+|.+|++.|++++|+.+....+|.+++|.+.+ + ...++...+++.+++.++..+..+++||++.
T Consensus 425 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 425 TSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred HHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 7778888999999999999999999999999999999999998 4 3456778888888887777777777776543
No 200
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.18 E-value=2.8e-10 Score=114.12 Aligned_cols=155 Identities=15% Similarity=0.047 Sum_probs=115.6
Q ss_pred hhhhHhhhhhhhcccCCCccchhHHHHHHHH-HHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhh-----hhhh
Q 009409 130 KVNLSVAIIPMSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-----AGFM 203 (535)
Q Consensus 130 ~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~ 203 (535)
........+.+.+|.|++.+++|++...... ...++.++.|++.||+|+|+.+..+.++.++..+..... ..+.
T Consensus 224 ~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (390)
T TIGR02718 224 AVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGI 303 (390)
T ss_pred HHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcH
Confidence 3333445566667789999999999888764 666778999999999999999988776553333222111 1222
Q ss_pred hHHHHHHHHhhhccCCchhhHHHHhhhcccc-cchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHH
Q 009409 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (535)
Q Consensus 204 ~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~ 282 (535)
..++....+.+++.+...+...+.+.+..++ +.+++.+++.+...++|..+||.++|++.+..||+..|++.+++.++.
T Consensus 304 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 304 AVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLA 383 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 2334445556666777777777787777765 789999999999999999999999999999999999999887766654
Q ss_pred HH
Q 009409 283 FS 284 (535)
Q Consensus 283 ~~ 284 (535)
.+
T Consensus 384 ~~ 385 (390)
T TIGR02718 384 IL 385 (390)
T ss_pred HH
Confidence 43
No 201
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.17 E-value=4.2e-10 Score=100.80 Aligned_cols=127 Identities=18% Similarity=0.113 Sum_probs=107.1
Q ss_pred hhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccC
Q 009409 139 PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG 218 (535)
Q Consensus 139 ~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~ 218 (535)
.+++.+|+|+...+.+.+..+....+..++.|.++||+|++.+.+.+..+..+..-.. ..-+.+.=++...+.|+..+
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~--l~Ft~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSG--LFFTFLSPYTSMTFLGLSYS 367 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhh--HHhhhccHHHHHHHHhhhHH
Confidence 3788999999999999999999999999999999999999999888776655544222 11222444577788999988
Q ss_pred CchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc
Q 009409 219 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (535)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (535)
......+..++...|+++.|++.|..+...++|-++.|+++|++.++-|
T Consensus 368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 8888889999999999999999999999999999999999999998654
No 202
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.17 E-value=2.2e-10 Score=117.71 Aligned_cols=178 Identities=16% Similarity=0.049 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhh-hcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhh--------HH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVL--------QT 184 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~--------~~ 184 (535)
+.+..+.+..+........+..++|.+ .+.+|.+..+.+++.++..++..++.++.|+++||+++|+.. ..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 340 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFN 340 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 334455566666666667777788875 566899999999999999999999999999999998755322 11
Q ss_pred HHHHH--HHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHh
Q 009409 185 GVLIW--SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (535)
Q Consensus 185 ~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (535)
+.... ++..+.......+....+++..+.+.+.+...+.......+..| +.+|.++++.+....+|+.++|.+.+++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~ 419 (465)
T TIGR00894 341 GIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNI 419 (465)
T ss_pred HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 11111 11111111112233334444555555555555555555567666 5899999999999999999999999998
Q ss_pred cccc---chhHHHHHHHHHHHHHHHHhhhcccC
Q 009409 263 IENL---GWESVFYIFGLLGIAWFSGFKILQEG 292 (535)
Q Consensus 263 ~~~~---gw~~~f~~~~~~~~~~~~~~~~~~~~ 292 (535)
.+.. +|+..|++.++..++..+........
T Consensus 420 ~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~ 452 (465)
T TIGR00894 420 LSQDSKNVWLIVFLIMAFVNILCVIFYLIFGSA 452 (465)
T ss_pred eCCCCchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 7643 48999999888777766665555443
No 203
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.17 E-value=2.1e-09 Score=107.93 Aligned_cols=174 Identities=8% Similarity=-0.063 Sum_probs=117.3
Q ss_pred HHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 009409 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (535)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 419 (535)
......++...........+|.+. +.+|.++.+.+++.+...++..++.++.|+++||+|+| .....+..
T Consensus 12 ~~~~~~~~~~~~~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr---------~~~~~~~~ 81 (394)
T PRK11652 12 MLVLLVAVGQMAQTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR---------PVILVGMS 81 (394)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh---------HHHHHHHH
Confidence 334444444444445555677766 46899999999999999999999999999999999865 22222333
Q ss_pred HHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccC
Q 009409 420 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH 499 (535)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 499 (535)
...+....... .++....++..++.|++.+...+.......+..++++++.+.+..+....++..++|.++|.+.+..|
T Consensus 82 ~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g 160 (394)
T PRK11652 82 IFILGTLVALF-AHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG 160 (394)
T ss_pred HHHHHHHHHHH-HccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 33333332222 23344445555666666555444444455555777889999999999999999999999999998774
Q ss_pred cchHHHHHHHHHHHHHHHhhhhhccC
Q 009409 500 SWSMSLFAPSIFFYLTGTIVWLAFAS 525 (535)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (535)
|...|.+.+++.++..++.....++
T Consensus 161 -~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 161 -WRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 8888888766555444444333333
No 204
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.16 E-value=6.4e-10 Score=113.23 Aligned_cols=179 Identities=11% Similarity=0.016 Sum_probs=117.5
Q ss_pred cHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHH
Q 009409 335 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 414 (535)
Q Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 414 (535)
++.++...+...+.......+....|. +++ .|+++.+.+++.+...++..++.++.|+++||+|+|+. .
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~---------~ 94 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPY-LVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVF---------L 94 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHH-HHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCcee---------h
Confidence 334444444444444333344555664 444 59999999999999999999999999999999986522 2
Q ss_pred HHHHHHHHHHHHHhhhcC---CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHH
Q 009409 415 TIAFLSPAVCMTLSSIDL---GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT 491 (535)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~ 491 (535)
..+.++.++...+..... .+.....+..++.|++.+...+.....+.+.+|+++|++++|+.+....+|+.++|.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~ 174 (438)
T TIGR00712 95 PAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLV 174 (438)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHH
Confidence 223333233322222111 12222334445566666655555666667778899999999999999999999999888
Q ss_pred HHHhcccCcchHHHHHHHHHHHHHHHhhhhhcc
Q 009409 492 GYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 492 G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (535)
+.+.+...+|+..|++.+++.++..++.++..+
T Consensus 175 ~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 175 LLGMAWFNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 876654346999998877766665555554443
No 205
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.16 E-value=4.4e-09 Score=105.74 Aligned_cols=171 Identities=12% Similarity=0.036 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHH
Q 009409 338 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 417 (535)
Q Consensus 338 ~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 417 (535)
++.+....+...+........+|.+ ++.+|.+..+.|++.+...++..++.+..|++.||+|+| .....+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r---------~~~~~g 74 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK---------AGILLG 74 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHH
Confidence 3444455555555554555677766 567899999999999999999999999999999999965 333444
Q ss_pred HHHHHHHHHHhhh--cCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009409 418 FLSPAVCMTLSSI--DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 495 (535)
Q Consensus 418 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 495 (535)
.++.++...+... ..++....++..++.|.+.+.........+.+..+++++++..++.+...++|..++|.+++.+.
T Consensus 75 ~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 75 LFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444333221 12233445556677788888777777777777778889999999999999999999999999886
Q ss_pred ccc-------------------------CcchHHHHHHHHHHHHHHHh
Q 009409 496 DST-------------------------HSWSMSLFAPSIFFYLTGTI 518 (535)
Q Consensus 496 ~~~-------------------------g~~~~~~~~~~~~~~~~~~~ 518 (535)
... .+|+.+|.+.+++.++..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 431 13777887776655544333
No 206
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.14 E-value=4.4e-09 Score=106.07 Aligned_cols=162 Identities=8% Similarity=0.016 Sum_probs=113.9
Q ss_pred hHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhc
Q 009409 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 431 (535)
Q Consensus 352 ~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (535)
...+...+|.+. +.+|.+..+.+...+...++..++.++.|+++||+|+| .....+.....+.......
T Consensus 29 ~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r---------~~l~~~~~~~~~~~~~~~~- 97 (406)
T PRK15402 29 NDMIQPGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRR---------PVMLAGVAFFILTCLAILL- 97 (406)
T ss_pred hhhHhcchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------HHHHHHHHHHHHHHHHHHH-
Confidence 334455566555 56899999999999999999999999999999999865 2223333333333333332
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHH
Q 009409 432 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 511 (535)
Q Consensus 432 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~ 511 (535)
.++....++..++.|.+.+...+.......+.+++++++++.++......++..++|.+++.+.+.. +|...|++.+++
T Consensus 98 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-~w~~~~~~~~~~ 176 (406)
T PRK15402 98 AQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL-PWRGMFVLFAAL 176 (406)
T ss_pred HccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHH
Confidence 2334444555566666666555555566667788889999999998888899999999999999976 588888887776
Q ss_pred HHHHHHhhhhhccC
Q 009409 512 FYLTGTIVWLAFAS 525 (535)
Q Consensus 512 ~~~~~~~~~~~~~~ 525 (535)
.++..+..+...++
T Consensus 177 ~~~~~~~~~~~~~~ 190 (406)
T PRK15402 177 AALSFFGLWRAMPE 190 (406)
T ss_pred HHHHHHHHHHhCCC
Confidence 66555544444443
No 207
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.14 E-value=2.8e-08 Score=98.14 Aligned_cols=316 Identities=16% Similarity=0.105 Sum_probs=190.9
Q ss_pred hhHH-HHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhh
Q 009409 151 AGLV-QSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (535)
Q Consensus 151 ~~~~-~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~ 229 (535)
.|.. .++.+..+.++.++.+.+.|+.|.|+.++++...+....+.. +-.|-+-+++...+.|+|.+..+.....+++
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gf--l~~N~y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGF--LFPNSYYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHH--HhcchHHHHHHHHHhhhhHHheecccceehh
Confidence 3443 778888999999999999999999999999999987777554 3344477899999999999999999999999
Q ss_pred hcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc--------chh-HH----------HHHHHHHHH---HHHHHhh
Q 009409 230 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--------GWE-SV----------FYIFGLLGI---AWFSGFK 287 (535)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--------gw~-~~----------f~~~~~~~~---~~~~~~~ 287 (535)
+...++.+.+..++..+....+.++|..+...+..+. +-+ +. ..+.+++.. +..+...
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~ 208 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFD 208 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhhee
Confidence 9999999999999999999999999977765554321 111 11 111111111 1111111
Q ss_pred hcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHH-
Q 009409 288 ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE- 366 (535)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~- 366 (535)
+.|.+......+.. + ....... ...-+++++|+...+....+..++...-.....|..+.-.
T Consensus 209 ~~p~~~~~~~~~~~-~-------~~~~~~l---------~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~ 271 (461)
T KOG3098|consen 209 FLPSKDVVNCKSSS-E-------TSFSELL---------KLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTR 271 (461)
T ss_pred ecCccchhhhhhhc-c-------ccHHHHH---------HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhh
Confidence 12211110000000 0 0000000 0123566778887777666665555555556666665422
Q ss_pred -hCCC-hhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhc-C-CC--------
Q 009409 367 -LSLN-LTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID-L-GL-------- 434 (535)
Q Consensus 367 -~g~s-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-------- 434 (535)
.+.+ ....++.....+++.++++...+.+.+|..+.+.++ .+.++..+-.....+.... + +.
T Consensus 272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~------~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~ 345 (461)
T KOG3098|consen 272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKP------TVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSP 345 (461)
T ss_pred hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCc------chhHHHHHHHHHHHHHhccccccCCCCCCccc
Confidence 2322 333455566677777888888888888876554332 2223333222222222211 1 11
Q ss_pred -------cHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHH
Q 009409 435 -------PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTG 492 (535)
Q Consensus 435 -------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G 492 (535)
.....+..++.|++-+............ ..|++|..+.++.-.-..++..++-....
T Consensus 346 ~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~-~~~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 346 PLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIAL-LYPDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred ccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 1133344456677666655555555555 44888898888888877777666554443
No 208
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.14 E-value=1.9e-09 Score=107.61 Aligned_cols=162 Identities=14% Similarity=0.080 Sum_probs=118.7
Q ss_pred hHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhc
Q 009409 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 431 (535)
Q Consensus 352 ~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (535)
.......+|.+.+ .+|.+..+.+++.+...++..++.++.|++.||+|+| .....+.+...+...+...
T Consensus 7 ~~~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~i~~~~~~~- 75 (377)
T PRK11102 7 IDMYLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK---------PVILGGTLVFALAAVACAL- 75 (377)
T ss_pred HHHHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh---------HHHHHHHHHHHHHHHHHHH-
Confidence 3455677888885 5799999999999999999999999999999999854 2233333333333333332
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHH
Q 009409 432 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 511 (535)
Q Consensus 432 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~ 511 (535)
.++.....+..++.|++.+...+.......+..++++|+++.|+.+....+|..++|.+++.+.+.. +|...|.+.+++
T Consensus 76 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 154 (377)
T PRK11102 76 AQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-SWHAIFWVLALA 154 (377)
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChHHHHHHHHHH
Confidence 2334445555666777777666666677777788899999999999999999999999999999987 488888877666
Q ss_pred HHHHHHhhhhhccC
Q 009409 512 FYLTGTIVWLAFAS 525 (535)
Q Consensus 512 ~~~~~~~~~~~~~~ 525 (535)
.++..++.....++
T Consensus 155 ~~~~~~~~~~~~~~ 168 (377)
T PRK11102 155 AILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHhCCc
Confidence 65555544444433
No 209
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.14 E-value=4.4e-09 Score=108.03 Aligned_cols=166 Identities=16% Similarity=0.208 Sum_probs=109.1
Q ss_pred HHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHH
Q 009409 345 HFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVC 424 (535)
Q Consensus 345 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (535)
.++.....+....++|.+. +.+|++..+.+++.+...++..++.++.|+++||+|+| .....+.+..++.
T Consensus 45 ~~~~~~~~~~~~~~~~~l~-~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r---------~~~~~~~~~~~~~ 114 (476)
T PLN00028 45 FFTCFVSTFAAAPLLPIIR-DNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR---------YGSAFLLMLTAPA 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------HHHHHHHHHHHHH
Confidence 3333444444555556554 67899999999998889999999999999999999865 2223333333333
Q ss_pred HHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhc----c---
Q 009409 425 MTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD----S--- 497 (535)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~----~--- 497 (535)
..+.... .+....++..++.|++.+... .....+.+.+++++||+++|+.+...++|..+++.+.+.+.. .
T Consensus 115 ~~~~~~~-~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 192 (476)
T PLN00028 115 VFCMSLV-SSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAP 192 (476)
T ss_pred HHHHHHh-cCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 3333332 233344444556666655432 334456666888999999999998888888888777665532 1
Q ss_pred -cCcchHHHHHHHHHHHHHHHhhhhh
Q 009409 498 -THSWSMSLFAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 498 -~g~~~~~~~~~~~~~~~~~~~~~~~ 522 (535)
..+|+..|++.+++.++..++.++.
T Consensus 193 ~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 193 SFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1158999998877666655555444
No 210
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.14 E-value=3.8e-09 Score=106.53 Aligned_cols=159 Identities=10% Similarity=0.070 Sum_probs=112.3
Q ss_pred HHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 009409 355 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL 434 (535)
Q Consensus 355 ~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (535)
...-+|.. .+.+|.+....+...+.+.++..++.++.|+++||+|+| ..+..+..+..+...+... .++
T Consensus 35 ~~p~l~~i-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr---------~~l~~~~~~~~~~~~~~~~-a~~ 103 (413)
T PRK15403 35 IQPGIINV-VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR---------PVLITGALIFTLACAATLF-TTS 103 (413)
T ss_pred hccCHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch---------HHHHHHHHHHHHHHHHHHH-cCC
Confidence 34444553 457899999999999999999999999999999999875 2233333333333333333 234
Q ss_pred cHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHH
Q 009409 435 PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL 514 (535)
Q Consensus 435 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~ 514 (535)
....+++-++.|++.+...........+.++++++++++++.+....+|..+||.+++.+.+.. +|...|++.+++.++
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~~~f~~~~~~~~i 182 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWKVLFAIIAVMGLI 182 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 4455566677777665444444444555678888999999999999999999999999999876 599999887776665
Q ss_pred HHHhhhhhccC
Q 009409 515 TGTIVWLAFAS 525 (535)
Q Consensus 515 ~~~~~~~~~~~ 525 (535)
..+..+...++
T Consensus 183 ~~~~~~~~lp~ 193 (413)
T PRK15403 183 AFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHhCCC
Confidence 55444443443
No 211
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.13 E-value=7.5e-10 Score=98.29 Aligned_cols=317 Identities=16% Similarity=0.116 Sum_probs=182.6
Q ss_pred hhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 009409 129 DKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVL 208 (535)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 208 (535)
+...-+|++-.+-+.+|+...++|.+.-..+-..+++..+.|.++||.|||+..+.-++.+.++++- -.++.+-.+++
T Consensus 52 gDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT--KhSpqYkVLmV 129 (454)
T KOG4332|consen 52 GDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT--KHSPQYKVLMV 129 (454)
T ss_pred hhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh--hcCCceEEEee
Confidence 3444566777788889999999999888888888899999999999999999887766666655532 35666788999
Q ss_pred HHHHhhhccCCchhhHHHH-hhhcccccchhhHHHHHH--------HhhhhHHHHHhhhHHHhcccc--chhHHHHHHHH
Q 009409 209 SRVLVGIGEGVSPSAATDL-IARSIPLEERSRAVSFVF--------GGLSFGSVAGLLLAPPIIENL--GWESVFYIFGL 277 (535)
Q Consensus 209 ~~~~~G~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~~~--------~~~~~g~~~g~~~~~~l~~~~--gw~~~f~~~~~ 277 (535)
+|.+-|+..+..+....++ +.|.. ++|+.-.-+.. .+..+-.+++.+.+..+.+.+ |--.+|-..+.
T Consensus 130 GR~LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAac 207 (454)
T KOG4332|consen 130 GRVLGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAAC 207 (454)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHH
Confidence 9999999998887777664 44443 33433322221 334445566666666666654 34445544333
Q ss_pred HHHH-HHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHH
Q 009409 278 LGIA-WFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCL 356 (535)
Q Consensus 278 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 356 (535)
+..+ ..++..-..|+......+ + ... +.. +...+.+..++++.++.-+..+.-...|.+.
T Consensus 208 fLaigmAvil~~W~ENygdps~~---k-dll---tqf------------~gaa~aiaSD~ki~LLG~iqsLFE~smytFV 268 (454)
T KOG4332|consen 208 FLAIGMAVILSSWSENYGDPSEN---K-DLL---TQF------------KGAARAIASDEKIALLGAIQSLFEGSMYTFV 268 (454)
T ss_pred HHHHHHHHHHhhhhhccCChhhh---H-HHH---HHh------------hHhHHHHhcchHHHHHHHHHHHHhhhhheee
Confidence 2222 222222222322211100 0 000 000 0012455667777666555555555555443
Q ss_pred -HhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhh----h-
Q 009409 357 -SWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS----I- 430 (535)
Q Consensus 357 -~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~- 430 (535)
.|.|..=-+..+ .--|.+++-+.++..+|+-+..++..|-..+ .-.... +.+++....+.+.. .
T Consensus 269 FLWTPaLspn~e~---iPhGfiFatFMlASmLGSSla~Rl~s~s~~~---ve~ymq----ivf~vs~a~l~Lpilt~~vs 338 (454)
T KOG4332|consen 269 FLWTPALSPNDEE---IPHGFIFATFMLASMLGSSLASRLLSRSSPK---VESYMQ----IVFLVSIAALLLPILTSSVS 338 (454)
T ss_pred eeecccCCCCccc---CCchhHHHHHHHHHHHhhHHHHHHHhcCCcc---cchHHH----HHHHHHHHHHHHHHHHhccC
Confidence 344432211112 2246778888888888888777776653221 111111 22222222222111 1
Q ss_pred -cCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHH
Q 009409 431 -DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNT 478 (535)
Q Consensus 431 -~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 478 (535)
...++...+++++++-...+.+++...-.-.+.+|++.|++.+.++..
T Consensus 339 P~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRv 387 (454)
T KOG4332|consen 339 PSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRV 387 (454)
T ss_pred CCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheec
Confidence 123444556666667777787788877777777888888877666544
No 212
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.12 E-value=7.9e-10 Score=105.60 Aligned_cols=177 Identities=18% Similarity=0.111 Sum_probs=141.9
Q ss_pred HHHHHHHHHHHHHhhhhhhHhh-hhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHH
Q 009409 115 LIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (535)
.+....++.++..=+.+.+... ...-..++|++..+..++.....+..++|++++|++.||+|.|+++.++.+++.+.+
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~ 332 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAA 332 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHH
Confidence 3334444444433333333333 333445999999999999999999999999999999999999999999999988888
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc-hhHHH
Q 009409 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVF 272 (535)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f 272 (535)
+... +......+.++-.+.|+..|+.+..+-++..+..|+++-++.+|+++...-.++.+||.+.+.+.+..| -|..+
T Consensus 333 ~~~~-~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~ 411 (438)
T COG2270 333 LYLI-FLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGV 411 (438)
T ss_pred HHHH-HccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHH
Confidence 6653 444446777888999999999999999999999999999999999999999999999999999987654 77777
Q ss_pred HHHHHHHHHHHHHhhhcccC
Q 009409 273 YIFGLLGIAWFSGFKILQEG 292 (535)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~ 292 (535)
....++.++.++....+|.+
T Consensus 412 ~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 412 LSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHhhHhhEEeecCC
Confidence 77777666666666666655
No 213
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=99.11 E-value=1.2e-08 Score=95.46 Aligned_cols=360 Identities=14% Similarity=0.097 Sum_probs=205.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhc-----ccCCchhhHH-HHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK-----IFGGRKVLQT-GVL 187 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~d-----r~g~r~~~~~-~~~ 187 (535)
+-+..+.+.+..++.-..... .+|.+.+.-|.|.++.+...-++ ..+ ..-++|.++.| |+||||..++ +..
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay-~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~q~ 107 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAY-WPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQY 107 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhh-hHH-HHHHHHHhhhHHHHHHhhccccceeeehHH
Confidence 455566677888888887777 99999998899988876443322 232 34678999999 9999886554 333
Q ss_pred HHHHHHHHHHhhhhh----------hhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhh
Q 009409 188 IWSLATALLPLLAGF----------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (535)
Q Consensus 188 ~~~~~~~~~~~~~~~----------~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 257 (535)
+.+..+.+++...+. ...+....++.-+..+.-..+...+.-.+.++++.|.+......+...|.++|..
T Consensus 108 llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ 187 (510)
T KOG3574|consen 108 LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNV 187 (510)
T ss_pred HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcc
Confidence 434444343332221 1223334466667777777777777778888899999988888888888888876
Q ss_pred hHHHhcc-------ccch---------hHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhc
Q 009409 258 LAPPIIE-------NLGW---------ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMG 321 (535)
Q Consensus 258 ~~~~l~~-------~~gw---------~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (535)
+.-.+.. ..+| ....++.+.+.++.-....+..++++... .++.....++.+
T Consensus 188 ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~----~~e~~~~i~~~y-------- 255 (510)
T KOG3574|consen 188 VFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESV----DEELELGIHESY-------- 255 (510)
T ss_pred eeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhh----hhhhhcCHHHHH--------
Confidence 6433322 0112 22333444444444434444433332221 111111111110
Q ss_pred cCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 009409 322 ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 401 (535)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~ 401 (535)
.-++++++-|.+..+..+....-.++.+-....+.-+.| .|++..+.+++..+. ++..++.+....|+..
T Consensus 256 -----k~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~----~plqI~l~~~~gk~ta 325 (510)
T KOG3574|consen 256 -----KLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPL----VPLQIALPLYIGKWTA 325 (510)
T ss_pred -----HHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeeh----hhHHHhhhhhheeecC
Confidence 123566777777777777777777777777888888875 599998887665443 3444444444444432
Q ss_pred c-CCCchhHHHHHHHHHHHH--HHHHHHHhhhcC-C-C---cH--HHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhH
Q 009409 402 T-GVETTMVRKICQTIAFLS--PAVCMTLSSIDL-G-L---PH--WEIVGILTAGLALSSFALSGLYCTHQDISPEYASI 471 (535)
Q Consensus 402 ~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~-~---~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 471 (535)
. +.-....|....-+.... .+.....-.+.. + . .. ..+....+.+.............-++..+|..-|+
T Consensus 326 ~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggT 405 (510)
T KOG3574|consen 326 GPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGT 405 (510)
T ss_pred CCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCcc
Confidence 1 111111111111111111 111111111111 0 0 11 11111223333333344445555666678999999
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHHhccc
Q 009409 472 LLGITNTVGAVPGIVGVALTGYLLDST 498 (535)
Q Consensus 472 ~~g~~~~~~~lg~~igp~i~G~l~~~~ 498 (535)
.+.+.|+..++|+-.-..+++.+.|..
T Consensus 406 ymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 406 YMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 999999999999999999999998854
No 214
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.10 E-value=1e-08 Score=102.61 Aligned_cols=149 Identities=11% Similarity=0.004 Sum_probs=101.4
Q ss_pred cHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHH
Q 009409 335 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 414 (535)
Q Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 414 (535)
+|.++...+..++.....+.+....+.+-++.+|++..+.+++.+++.++..++++..|++.||+|.| + ..
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R--------~-v~ 103 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR--------R-WT 103 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh--------H-HH
Confidence 35666666666666666666666666666557999999999999999999999999999999999975 2 22
Q ss_pred HHHHHHHHHHHHHhhhc----CCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHH
Q 009409 415 TIAFLSPAVCMTLSSID----LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL 490 (535)
Q Consensus 415 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i 490 (535)
.++.+..++........ .++....++..++.|++ +.........+..-+|+++||++.|+....+++|..+++.+
T Consensus 104 ~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l 182 (462)
T PRK15034 104 VFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLV 182 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHH
Confidence 23333333333333221 13334445555667776 44556666667777889999999999977777777766555
Q ss_pred HHH
Q 009409 491 TGY 493 (535)
Q Consensus 491 ~G~ 493 (535)
...
T Consensus 183 ~p~ 185 (462)
T PRK15034 183 APL 185 (462)
T ss_pred HHH
Confidence 543
No 215
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.09 E-value=1.8e-09 Score=106.76 Aligned_cols=141 Identities=14% Similarity=0.023 Sum_probs=108.8
Q ss_pred HHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhccc-CCchhhHHHHHHHHHHHHHHHhhhhhh
Q 009409 125 ICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSLATALLPLLAGFM 203 (535)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~ 203 (535)
+..........+.|.+.++.|.+..+.+++.+...++..+++++.|++.||+ +||+.+.++.++.+++.++..+..++
T Consensus 208 ~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 286 (355)
T TIGR00896 208 LQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMH- 286 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhh-
Confidence 3334444556677887778899999999999999999999999999999999 56666777777766666555433222
Q ss_pred hHHHHHHHHhhhccCCchhhHHHHhhhccc-ccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc
Q 009409 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (535)
Q Consensus 204 ~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 267 (535)
... ...++.|++.+...+...+.+.+..+ +++++..+++.+....+|.+++|.+.|++.++.|
T Consensus 287 ~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 287 GLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222 24567899999888887777765554 5667899999999999999999999999998765
No 216
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.09 E-value=1.6e-08 Score=92.31 Aligned_cols=164 Identities=16% Similarity=0.139 Sum_probs=124.7
Q ss_pred HHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhh-----
Q 009409 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA----- 200 (535)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----- 200 (535)
.....+.++.+-|.+++.+|+|++|.+.+.+...+|..+ .++.|.+.|++|++.++.++.+...++........
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~ 92 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIP 92 (250)
T ss_pred hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccC
Confidence 334667788889999999999999999999999999876 58899999999999999999998888887664432
Q ss_pred -hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHH-
Q 009409 201 -GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL- 278 (535)
Q Consensus 201 -~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~- 278 (535)
..++.+.+..++.|.+.+...........+.|| ++||++.|+.-...++++.+-..+...+.+.-.-+ .+.+.++.
T Consensus 93 ~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~-fll~la~~~ 170 (250)
T PF06813_consen 93 SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSS-FLLFLAVLP 170 (250)
T ss_pred ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHH-HHHHHHHHH
Confidence 235667777778888877777777777778898 68999999999999999998888877776653333 33444443
Q ss_pred HHHHHHHhhhcccC
Q 009409 279 GIAWFSGFKILQEG 292 (535)
Q Consensus 279 ~~~~~~~~~~~~~~ 292 (535)
.++.++...++++.
T Consensus 171 ~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 171 AVVCLVAMFFVRPV 184 (250)
T ss_pred HHHHHHHhhheecc
Confidence 33444444444433
No 217
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.08 E-value=5.5e-09 Score=119.46 Aligned_cols=172 Identities=12% Similarity=0.107 Sum_probs=115.1
Q ss_pred HhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHH----HHHHhCC-ChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCC
Q 009409 331 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTY----FSEELSL-NLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE 405 (535)
Q Consensus 331 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~----l~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 405 (535)
.+++++.++.+++..++..++.+.....++.+ +.+..+. +....++..+...+..++..++.|+++||+++|+.
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~- 84 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL- 84 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH-
Confidence 45677777777777666666544333222222 2111111 12456777788888999999999999999997621
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhh
Q 009409 406 TTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGI 485 (535)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ 485 (535)
.+............ .+......+.+.++++.++.|++.+.+.+.....+.+.+++++++.++|+.++...+|.+
T Consensus 85 ----~~~~~~~~~~~~~~--~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~ 158 (1140)
T PRK06814 85 ----AKILKFAEIGIAAL--AIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAIL 158 (1140)
T ss_pred ----HHHHHHHHHHHHHH--HHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHH
Confidence 00111111111111 111222244566677778888888888888888888889999999999999999999999
Q ss_pred HHHHHHHHHhcccCcchHHHHHHHH
Q 009409 486 VGVALTGYLLDSTHSWSMSLFAPSI 510 (535)
Q Consensus 486 igp~i~G~l~~~~g~~~~~~~~~~~ 510 (535)
+||.++|++.+.. +|...|...++
T Consensus 159 igp~l~g~l~~~~-~~~~~~~~~~~ 182 (1140)
T PRK06814 159 LGTIIGGLATISG-NFVILVALLMG 182 (1140)
T ss_pred HHHHHHHHHHhcc-ccHHHHHHHHH
Confidence 9999999999987 48777744333
No 218
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.07 E-value=8.5e-08 Score=100.59 Aligned_cols=152 Identities=19% Similarity=0.234 Sum_probs=122.8
Q ss_pred hhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcc-cCCchhhHHHHHHHHHHHHHHHhhhh-------hhhHHHH
Q 009409 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLATALLPLLAG-------FMPGLVL 208 (535)
Q Consensus 137 ~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~ 208 (535)
...+.+.+|.+.+.+..+...+....-+.++++|+++|+ +|+++.+.++.++..++.++++..+. .....++
T Consensus 11 vlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~ 90 (654)
T TIGR00926 11 VLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLL 90 (654)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHH
Confidence 344556689999999889888888888999999999996 79999999999998888877653221 1123567
Q ss_pred HHHHhhhccCCchhhHHHHhhhccccc---chhhHHHHHHHhhhhHHHHHhhhHHHhcccc-------chhHHHHHHHHH
Q 009409 209 SRVLVGIGEGVSPSAATDLIARSIPLE---ERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-------GWESVFYIFGLL 278 (535)
Q Consensus 209 ~~~~~G~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------gw~~~f~~~~~~ 278 (535)
+..+.++|.|++-|...+...|.++++ +|-..+.++..+.++|+.+++++.+++.+.. +|...|.+.+++
T Consensus 91 gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~ 170 (654)
T TIGR00926 91 GLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAIL 170 (654)
T ss_pred HHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHH
Confidence 788889999999999999999999754 3677888899999999999999999887443 699999999888
Q ss_pred HHHHHHHhhh
Q 009409 279 GIAWFSGFKI 288 (535)
Q Consensus 279 ~~~~~~~~~~ 288 (535)
.++.++++..
T Consensus 171 m~ia~lvf~~ 180 (654)
T TIGR00926 171 MILALIVFMA 180 (654)
T ss_pred HHHHHHHHHH
Confidence 7776655544
No 219
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.06 E-value=9.8e-10 Score=103.56 Aligned_cols=153 Identities=16% Similarity=0.145 Sum_probs=127.4
Q ss_pred hCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHH
Q 009409 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAG 446 (535)
Q Consensus 367 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 446 (535)
.+-..++.|++++...+..++.+++.|.+.||+|.| ..+.+++..+.....++.+. ++.+..+++-.+-|
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~---------ipm~~Gl~vmf~sTilFafg-~sy~~l~vAR~LQg 170 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYK---------IPMVAGLFVMFLSTILFAFG-NSYPMLFVARSLQG 170 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccc---------cHHHHHHHHHHHHHHHHHHc-chhHHHHHHHHHhh
Confidence 355678899999999999999999999999999865 55566666666666666553 34456677788899
Q ss_pred HHHhhhhhhhhhhhhhccCCcc-hhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhccC
Q 009409 447 LALSSFALSGLYCTHQDISPEY-ASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAS 525 (535)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (535)
++.++........+++.++.|. |++++|+.-....+|..+||+++|.++|..| +...|.++++++++...+.++..+.
T Consensus 171 vgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 171 VGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred hhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCc
Confidence 9999988899999999888766 6999999999999999999999999999985 8999999999888888888887766
Q ss_pred CCCCC
Q 009409 526 SKPQN 530 (535)
Q Consensus 526 ~~~~~ 530 (535)
++.++
T Consensus 250 ~~~~~ 254 (464)
T KOG3764|consen 250 TEMDP 254 (464)
T ss_pred cccCc
Confidence 55544
No 220
>PRK10133 L-fucose transporter; Provisional
Probab=99.06 E-value=2.6e-08 Score=101.13 Aligned_cols=149 Identities=11% Similarity=0.065 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHH
Q 009409 337 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI 416 (535)
Q Consensus 337 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 416 (535)
.+..+.+..+...+.........|.+ ++.+|.++.+.|++.+...++..++.++.|++.||+|+| ..+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r---------~~l~~ 96 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK---------AGIIT 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHH
Confidence 34455566666666777777888887 678999999999999999999999999999999999965 33334
Q ss_pred HHHHHHHHHHHh--hhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHH
Q 009409 417 AFLSPAVCMTLS--SIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL 494 (535)
Q Consensus 417 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l 494 (535)
+.++.++...+. ....++....++..++.|++.+.........+.+..++++++...++.+....+|..++|.+++.+
T Consensus 97 g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 97 GLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444443332 122334455566677888888877777777666544445555679999999999999999998866
Q ss_pred h
Q 009409 495 L 495 (535)
Q Consensus 495 ~ 495 (535)
.
T Consensus 177 ~ 177 (438)
T PRK10133 177 I 177 (438)
T ss_pred H
Confidence 5
No 221
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.05 E-value=1e-09 Score=107.07 Aligned_cols=158 Identities=15% Similarity=0.107 Sum_probs=131.0
Q ss_pred hHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 009409 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVL 212 (535)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 212 (535)
+..+...+.++-+.+...+|.+.++..+.-++.-.+..++.+|+|.|+.++++.+++++=..+.+ ++++.+.+.+.+.+
T Consensus 243 f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~-~~~~~~~i~~~klL 321 (412)
T PF01306_consen 243 FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSG-FATNPWVISLIKLL 321 (412)
T ss_dssp HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-T--SHHHHHHHHHH
T ss_pred HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHh-hhcchHHHHHHHHH
Confidence 44455555555666777899999999999999999999999999999999999999887776664 67777899999999
Q ss_pred hhhccCCchhhHHHHhhhcccccchhhHHHHH-HHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhccc
Q 009409 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFV-FGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (535)
Q Consensus 213 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 291 (535)
.|+-.+........++++.+|++-.++...+. +...++|.++.+.++|.+.|+.|.+.+|++++.+.++..++..+..+
T Consensus 322 H~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 322 HALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 99999999999999999999988888888885 67888999999999999999999999999999887766555444433
No 222
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.04 E-value=3.4e-09 Score=107.57 Aligned_cols=152 Identities=20% Similarity=0.175 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhhhhhcc-cCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHH
Q 009409 116 IGTTSLAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (535)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (535)
+..+.+..++............+.+.++ +|.+ ...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.+
T Consensus 227 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~ 305 (428)
T PF13347_consen 227 FRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFL 305 (428)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHH
Confidence 3345555556666666666666665555 4544 6778888899999999999999999999999999999999999888
Q ss_pred HHHhhh-hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccc-------cchhhHHHHHHHhhhhHHHHHhhhHHHhcccc
Q 009409 195 LLPLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-------EERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (535)
Q Consensus 195 ~~~~~~-~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 266 (535)
+..+.. ++.+.+++..++.|++.+...+...++++|..+. ++.|..+|.++....+|..+++.+.+.+.+..
T Consensus 306 ~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~ 385 (428)
T PF13347_consen 306 LLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV 385 (428)
T ss_pred HHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 876554 5778999999999999999999999999998863 34588999999999999999999999887654
Q ss_pred ch
Q 009409 267 GW 268 (535)
Q Consensus 267 gw 268 (535)
|+
T Consensus 386 Gy 387 (428)
T PF13347_consen 386 GY 387 (428)
T ss_pred Cc
Confidence 43
No 223
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.03 E-value=1.9e-07 Score=90.77 Aligned_cols=324 Identities=15% Similarity=0.098 Sum_probs=179.6
Q ss_pred hHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhc
Q 009409 152 GLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 231 (535)
Q Consensus 152 ~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~ 231 (535)
+.+.-+-.+...+..+.+.++.+|+..+.-..+..++.+++.++.+ ++++.+.-+++-.+.+++.|........+.. .
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va-~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~ 139 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVA-FSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-F 139 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhhee-eccchhHHHHHHHHHhhhhhhhHHHHHHHHH-h
Confidence 4455566677778888888999998766555566666677776664 6677788888999999999988888777754 5
Q ss_pred ccccchhhHHHHHHHhhhhHHHHHhhhHHHhcc-ccchhHHHHHHHHHHHHHHHHhh-hcccCCCCCCCCCCcchhhhhh
Q 009409 232 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWESVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINM 309 (535)
Q Consensus 232 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 309 (535)
+++ ...+-+.++.+.++++|+..--.+.+ ..+.|..+.+...+.++..+.++ .++.+++.......+.+... .
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~-~ 214 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEA-E 214 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCcc-c
Confidence 553 35788888888899999887766665 23457788887777655544433 44433322211111110000 0
Q ss_pred hhhhhhhHHH-hccCCCCCcHHHhh-hcHHHHHHHHHHHHHhhhhHHHHH-hhHHHHH-HHhCCChhhHHHHHhhHHHHH
Q 009409 310 KKSLSASLEE-MGESLKDVPWKAIF-RSKAVWAMIYAHFCGSWGHYTCLS-WLPTYFS-EELSLNLTEAAWVSILPPLAS 385 (535)
Q Consensus 310 ~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~-~~p~~l~-~~~g~s~~~~g~~~~~~~~~~ 385 (535)
++....+.++ ..+...+..+++-+ +-+.+...++-.++.++..|.++. ..|...- ....-...+..++...+.++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~GV 294 (402)
T PF02487_consen 215 DDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQLGV 294 (402)
T ss_pred ccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHHHH
Confidence 0000000000 00111112222222 223333355555555555555533 3333321 111112333445555566665
Q ss_pred HHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHH--hhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhc
Q 009409 386 VLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL--SSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQD 463 (535)
Q Consensus 386 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 463 (535)
.+++--...+ |+ | +.++..+.-.+-.+.+++ .....++.+..++.++..|+..|..+......+.++
T Consensus 295 FISRSS~~~~--ri--r-------~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~ 363 (402)
T PF02487_consen 295 FISRSSLPFF--RI--R-------RLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEE 363 (402)
T ss_pred hhhhcceeee--eh--h-------hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence 5554432221 11 1 111111111111111111 111123344455566777888888888888888888
Q ss_pred cCCcchhHHHHHHHHhhhhhhhHHHHHHHH
Q 009409 464 ISPEYASILLGITNTVGAVPGIVGVALTGY 493 (535)
Q Consensus 464 ~~~~~~g~~~g~~~~~~~lg~~igp~i~G~ 493 (535)
.++++|-.++|.......+|..++..++-.
T Consensus 364 ~~~~~REFslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 364 VPPEDREFSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred CCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999999888888777766543
No 224
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.02 E-value=1.1e-08 Score=117.40 Aligned_cols=158 Identities=15% Similarity=0.126 Sum_probs=111.9
Q ss_pred HhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCCh--hhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchh
Q 009409 331 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNL--TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM 408 (535)
Q Consensus 331 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 408 (535)
..++++.++.+.+..++..+........+..++...++.+. ...+++.++..++.+++.++.|+++||+|+|
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk------ 77 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKN------ 77 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHH------
Confidence 45677778777777777766665555555555555556543 3467778888899999999999999999975
Q ss_pred HHHHHHHHHHHHHHH--HHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhH
Q 009409 409 VRKICQTIAFLSPAV--CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIV 486 (535)
Q Consensus 409 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i 486 (535)
..+..+.++.++ .+........+...+++..++.|++.+...+....++.+.+++++|++++|+.+....+|.++
T Consensus 78 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~l 154 (1146)
T PRK08633 78 ---RVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILA 154 (1146)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHH
Confidence 222222221111 111111112334555666677888888777777778888899999999999999999999999
Q ss_pred HHHHHHHHhcc
Q 009409 487 GVALTGYLLDS 497 (535)
Q Consensus 487 gp~i~G~l~~~ 497 (535)
||.++|++.+.
T Consensus 155 g~~l~~~l~~~ 165 (1146)
T PRK08633 155 GTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHh
Confidence 99999999876
No 225
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.00 E-value=4.1e-10 Score=108.43 Aligned_cols=178 Identities=11% Similarity=0.105 Sum_probs=135.3
Q ss_pred HHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHH
Q 009409 339 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 418 (535)
Q Consensus 339 ~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 418 (535)
..+.+...+...-.|.+-..++- .++.+|.++...|++...+.+...++++++|++.||++|++ ++.++.
T Consensus 36 ~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~---------v~~vG~ 105 (493)
T KOG1330|consen 36 VILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKR---------VIAVGI 105 (493)
T ss_pred HHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcce---------EEeeHH
Confidence 33444444444444444443332 34578999999999999999999999999999999998653 334444
Q ss_pred HHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhccc
Q 009409 419 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 498 (535)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~ 498 (535)
.+-.+..+...+. ...+...+.-.+.|++-+.+.+.....+.+.++.++|++++++++.....|..+|-..++++.+..
T Consensus 106 ~iW~~Av~~~~fs-~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~ 184 (493)
T KOG1330|consen 106 FIWTLAVFASGFS-NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT 184 (493)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc
Confidence 4444444333332 233444556678899999999999999999999999999999999999999999999999999998
Q ss_pred CcchHHHHHHHHHHHHHHHhhhhhccCCC
Q 009409 499 HSWSMSLFAPSIFFYLTGTIVWLAFASSK 527 (535)
Q Consensus 499 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (535)
+.|+++|...+++.++.+++++++.+...
T Consensus 185 ~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 185 FWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred cceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 88999999999988888888887766544
No 226
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.99 E-value=2e-09 Score=100.21 Aligned_cols=132 Identities=12% Similarity=0.058 Sum_probs=100.9
Q ss_pred HHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchh
Q 009409 159 FWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 238 (535)
Q Consensus 159 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~ 238 (535)
.+.-.-|.++.+++.||+|||+++..+.++++++.++.. .+.+-..+.+..|..-++.++.+.+.+.|..|++|..-|+
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~-~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLT-TCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHH-HhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 344557889999999999999999999999999887764 3333234444444555555666778899999999999999
Q ss_pred hHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhcccCC
Q 009409 239 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGE 293 (535)
Q Consensus 239 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 293 (535)
...|....+.-+|+++.|+++ +....+-..+..+.+.+.++..+..+++|-+.
T Consensus 470 tgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 999999999999999999999 33334445566666777777777777777544
No 227
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.99 E-value=3.5e-08 Score=97.20 Aligned_cols=133 Identities=10% Similarity=-0.005 Sum_probs=102.4
Q ss_pred HHHhhHHHHHHHhCCChhh-HHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCC
Q 009409 355 CLSWLPTYFSEELSLNLTE-AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG 433 (535)
Q Consensus 355 ~~~~~p~~l~~~~g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (535)
...+...++.+.+|++..+ .|.+...+..+..+..+.+|+++||+|.| ..+.++.+...+...+..+. .
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K---------~vL~l~~l~Wsl~t~L~~fa-~ 113 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK---------PVLVLQALSFVCVWLLLLLG-T 113 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHHHHHHHHHHHHHHHH-H
Confidence 3444455666789999999 99999999999999999999999999865 23333444333333333332 2
Q ss_pred CcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccC
Q 009409 434 LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH 499 (535)
Q Consensus 434 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 499 (535)
+...+.+.-+++|++.+... ....++..-+|+++|++++|+.+....+|.++++++++.+. .+|
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~g 177 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLG 177 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 34455666788899988877 77788888899999999999999999999999999999944 443
No 228
>PRK09848 glucuronide transporter; Provisional
Probab=98.94 E-value=4.8e-09 Score=107.20 Aligned_cols=151 Identities=14% Similarity=0.092 Sum_probs=111.4
Q ss_pred HHHHHHHHHHhhhhhhHhhhhhh-hcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (535)
...+..++............|.+ .+.+|.+....++......++..++.++++++.||+|+|+++.++.++..++.++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~ 311 (448)
T PRK09848 232 MLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLF 311 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 33444444444444455556654 44567666555554555567778899999999999999999999988877776665
Q ss_pred Hhhh-hhhhHHHHHHHHhhhccCCchhhHHHHhhhccccc-------chhhHHHHHHHhhhhHHHHHhhhHHHhccccch
Q 009409 197 PLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE-------ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (535)
Q Consensus 197 ~~~~-~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (535)
.... ++++.+++..++.|+|.+...+...++.+|..+.+ ++|..+|..+....+|..+|+.+.+.+.+..|+
T Consensus 312 ~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 312 FWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4322 34566667788899999999999999999988754 358999999999999999999999988765554
No 229
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.91 E-value=7.9e-09 Score=109.13 Aligned_cols=152 Identities=13% Similarity=0.151 Sum_probs=111.4
Q ss_pred HHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcC---------
Q 009409 362 YFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL--------- 432 (535)
Q Consensus 362 ~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 432 (535)
-++++++++..+.|++.+...++.+++.++.+++.||.++++. +.++.++.++..++.....
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~---------i~~g~ll~~lg~ll~alphf~~~~y~~~ 128 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIV---------IGIGCAIMGLGSFLLSLPHFLSGRYSYS 128 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceE---------EEecHHHHHHHHHHHhChHHhcCCcccc
Confidence 4456799999999999999999999999999999999987633 2223333333332222210
Q ss_pred ----------------------------------------C-CcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhH
Q 009409 433 ----------------------------------------G-LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASI 471 (535)
Q Consensus 433 ----------------------------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 471 (535)
. ....++++-++.|++.+...+....++.+.+++++|+.
T Consensus 129 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~ 208 (633)
T TIGR00805 129 TTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPL 208 (633)
T ss_pred ccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHH
Confidence 0 12234567788888888888888888888899999999
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHHhcccC---------------------cchHHHHHHHHHHHHHHHhhhhh
Q 009409 472 LLGITNTVGAVPGIVGVALTGYLLDSTH---------------------SWSMSLFAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 472 ~~g~~~~~~~lg~~igp~i~G~l~~~~g---------------------~~~~~~~~~~~~~~~~~~~~~~~ 522 (535)
+.|+.+....+|..+|+.++|++.+.+. .|...|++.+++.++.++.++.+
T Consensus 209 ~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 209 YIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999886542 25566777776666655544433
No 230
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.90 E-value=2.9e-08 Score=91.77 Aligned_cols=373 Identities=13% Similarity=0.066 Sum_probs=219.5
Q ss_pred cccCCCccchh-HHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCc
Q 009409 142 HRFGWNSSVAG-LVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 220 (535)
Q Consensus 142 ~~~g~s~~~~~-~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~ 220 (535)
.+.|++..+.. -+.-...-.+.+.-++.=.+.|....|++++.-.+.....-.++ .+.++.+.+=+.-++.|...+ .
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~l-v~g~sV~~mQvlE~FyG~~tA-a 111 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIML-VFGPSVKAMQVLEFFYGPATA-A 111 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHH-HhcCCchheeeehhhcChHHH-H
Confidence 44566655543 12222222344444555568899888998887655544444333 467777777788888888754 4
Q ss_pred hhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc--cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 009409 221 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--LGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 298 (535)
Q Consensus 221 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (535)
..+.++++-...+|+++.++.|...+..-.|-..|..++-.+... .++...=++......+......++|..++....
T Consensus 112 EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f 191 (433)
T KOG3810|consen 112 EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYF 191 (433)
T ss_pred HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhh
Confidence 456778888888999999999999999999999999888887753 344444444444445556666777776633221
Q ss_pred CCCcchhhh-hhhhhhh-hhHHH-hccC--CCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHh-CCChh
Q 009409 299 TLAPRSNYI-NMKKSLS-ASLEE-MGES--LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL-SLNLT 372 (535)
Q Consensus 299 ~~~~~~~~~-~~~~~~~-~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~ 372 (535)
...+++... +.++... .+..+ .+.. .-...+....+||.+..-.+-..+..++++.+.++.....++.- +-...
T Consensus 192 ~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~v 271 (433)
T KOG3810|consen 192 HRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANV 271 (433)
T ss_pred hcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhh
Confidence 111111100 0000000 00000 0000 00112345678888888888888899999999998888886542 11122
Q ss_pred hHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhh
Q 009409 373 EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSF 452 (535)
Q Consensus 373 ~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 452 (535)
.-|..-++..+.++++.++.|++.-++.+. +...+.++.+.-+.++++.. ...+.++..++.++........
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w~r~-------g~~ll~~~s~~~agllf~m~-~t~~Iw~~Ya~yvlfr~~y~l~ 343 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINWNRW-------GDLLLAVGSAVQAGLLFIMA-QTQHIWVCYAGYVLFRVIYQLT 343 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeeccchh-------hHHHHHHHHHHhhhhhhhhh-cccceehhhhhHHHHHhhHhhh
Confidence 234455666677777777777775544322 33444444333333333333 3445666677777776666666
Q ss_pred hhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccC----------cchHHHHHHHHHHHHHHHhhhhh
Q 009409 453 ALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH----------SWSMSLFAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 453 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g----------~~~~~~~~~~~~~~~~~~~~~~~ 522 (535)
.......++.+...|.-|..+|++.++.-+-.. ++.-.+.|..| -|..-|.+.+.+.++...+.+..
T Consensus 344 itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQs---ilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 344 ITIATFQIARNLSSELFGLVFGINTFVALILQS---ILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred hhHHHHHHHHhhhhhhheeeeehHHHHHHHHHH---hheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 666666677778889999999998886654333 33333444211 24445666666666665655544
Q ss_pred ccCCC
Q 009409 523 FASSK 527 (535)
Q Consensus 523 ~~~~~ 527 (535)
.++.+
T Consensus 421 ~~~~~ 425 (433)
T KOG3810|consen 421 CRRNK 425 (433)
T ss_pred hhcCC
Confidence 44433
No 231
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.90 E-value=8.5e-08 Score=96.71 Aligned_cols=182 Identities=14% Similarity=0.086 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHH----HHHcCCCchhHHHH
Q 009409 337 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN----LIATGVETTMVRKI 412 (535)
Q Consensus 337 ~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~~~~~~~~~~~~~~ 412 (535)
++..+....+...+++.....+++.|++ .+|.+....++++....+.+++..++.|+++|| +|+| +.
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR--------rp 75 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR--------RP 75 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh--------HH
Confidence 3344455555666666667788888885 689999999999999999999999999999995 7765 23
Q ss_pred HHHHHHHHHHHHHHHhhhcCC------------Cc----HHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcch--hHHHH
Q 009409 413 CQTIAFLSPAVCMTLSSIDLG------------LP----HWEIVGILTAGLALSSFALSGLYCTHQDISPEYA--SILLG 474 (535)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~------------~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--g~~~g 474 (535)
.+..+.+...+.+.+.....+ .. ...++++.+..++......+....+.+..|+++| +.+.+
T Consensus 76 ~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 76 FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence 333333333333333322111 00 1222333344445555666667777787887755 68999
Q ss_pred HHHHhhhhhhhHHHHHHHHH--hccc------------CcchHHHHHHHHHHHHHHHhhhhhccCCC
Q 009409 475 ITNTVGAVPGIVGVALTGYL--LDST------------HSWSMSLFAPSIFFYLTGTIVWLAFASSK 527 (535)
Q Consensus 475 ~~~~~~~lg~~igp~i~G~l--~~~~------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (535)
+.+...++|..+|+.++|+. .+.+ .++...|++.++++++..++..+..++..
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 99999999999999999875 2221 15677888877777777666666665543
No 232
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.90 E-value=6.2e-08 Score=95.84 Aligned_cols=166 Identities=10% Similarity=-0.007 Sum_probs=105.7
Q ss_pred HHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcC
Q 009409 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL 432 (535)
Q Consensus 353 ~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (535)
..+...+|.++++ .|++..+.|++... .+...+ .++.|+++||++.|+..+ |+..+..+.+..++.........
T Consensus 5 ~~~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Gr---r~~~l~~~~~~~~~~~~~l~~~~ 78 (356)
T TIGR00901 5 GLVGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGR---RRSWLVLTQVLLLSLLLILSFLV 78 (356)
T ss_pred hhHHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCc---cHHHHHHHHHHHHHHHHHHHcCC
Confidence 3456678888864 69999999988644 444444 889999999984321110 23222333333333322222221
Q ss_pred C-CcH-HHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCc-------chH
Q 009409 433 G-LPH-WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS-------WSM 503 (535)
Q Consensus 433 ~-~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~-------~~~ 503 (535)
+ ... ......++.+.+.+...+.....+.+..++++|+.+.|+......+|.++++.+++.+.+..|. |..
T Consensus 79 ~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~ 158 (356)
T TIGR00901 79 PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGY 158 (356)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHH
Confidence 1 222 2222333445555555566666777878999999999999999999999999999999988742 888
Q ss_pred HHHHHHHHHHHHHHhhhhhcc
Q 009409 504 SLFAPSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~ 524 (535)
.|.+.+++.++..+..++..+
T Consensus 159 ~f~i~ai~~l~~~~~~~~~~~ 179 (356)
T TIGR00901 159 IFFWTALLILPGLLVTLFLAK 179 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 898877765554444333333
No 233
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.90 E-value=3.1e-11 Score=123.53 Aligned_cols=182 Identities=21% Similarity=0.123 Sum_probs=118.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
+++.+..+.+..+....+......+.+.+.++.+.+.. -+......+...++.+++..+.||+|||++++.+..+.++
T Consensus 251 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~ 328 (451)
T PF00083_consen 251 RKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAI 328 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccc
Confidence 34444444444444445555566667788888888777 2222233345556777888999999999999999888777
Q ss_pred HHHHHH---hh-hhh----hhHHHHHHHHhhhc-cCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHh
Q 009409 192 ATALLP---LL-AGF----MPGLVLSRVLVGIG-EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (535)
Q Consensus 192 ~~~~~~---~~-~~~----~~~l~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (535)
+.+.++ .. .++ -...+++-.+..++ ..+..+..+.+.+|.+|.+.|++..++......++.++++.+...+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~ 408 (451)
T PF00083_consen 329 CSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYL 408 (451)
T ss_pred cccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 766553 11 111 01112222222222 2234466678889999999999999999999999999999998888
Q ss_pred ccccchhHHHHHHHHHH-HHHHHHhhhcccCCCC
Q 009409 263 IENLGWESVFYIFGLLG-IAWFSGFKILQEGETS 295 (535)
Q Consensus 263 ~~~~gw~~~f~~~~~~~-~~~~~~~~~~~~~~~~ 295 (535)
.+..+-...|++.+++. +...+..+++||++..
T Consensus 409 ~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 409 FNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGK 442 (451)
T ss_pred cccccccccchhhHHHHHHHHhheeEEEeeCCCC
Confidence 87776333455544444 4445666777877654
No 234
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.90 E-value=5.5e-09 Score=107.36 Aligned_cols=153 Identities=13% Similarity=0.014 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHH
Q 009409 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (535)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (535)
+..+.+..++............+.+.+...-+....+++.++..++..++.+++++++||+|+|+.+.++..+..++.+.
T Consensus 233 ~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~ 312 (473)
T PRK10429 233 LSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGV 312 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 33344444444555555666666666655445666777777777888999999999999999999999888776655544
Q ss_pred HHh----hhhhhhHHHHHHHHhhhccCCchhhHHHHhhhccc-------ccchhhHHHHHHHhhhhHHHHHhhhHHHhcc
Q 009409 196 LPL----LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (535)
Q Consensus 196 ~~~----~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (535)
... ..++.+.+++..++.|++.+...+...++++|..+ .+..|..+|......-+|..+++.+.|++.+
T Consensus 313 ~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 313 LLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred HHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 13445566777788899999999999999999865 3345668999999999999999999999886
Q ss_pred ccch
Q 009409 265 NLGW 268 (535)
Q Consensus 265 ~~gw 268 (535)
..|+
T Consensus 393 ~~Gy 396 (473)
T PRK10429 393 LIGY 396 (473)
T ss_pred HcCC
Confidence 5554
No 235
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.89 E-value=2.7e-08 Score=83.56 Aligned_cols=134 Identities=12% Similarity=0.137 Sum_probs=93.7
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhh
Q 009409 378 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGL 457 (535)
Q Consensus 378 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 457 (535)
.....++..++.++.+++.||+++| ...........+....... .++.....+..++.+++.+...+...
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 73 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRK---------PVLLVGLFIFVLSTAMFAL-SSNITVLIIARFLQGFGAAFALVAGA 73 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchh---------HHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhHH
Confidence 4556778889999999999999865 2222333333333322222 23344455556677777776666666
Q ss_pred hhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhh
Q 009409 458 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 458 ~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 522 (535)
....+..++++|+++.++.+....+|..++|.+.|.+.+.. ++...+.+.+++.++..+..+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 74 ALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHHHhhc
Confidence 77778788999999999999999999999999999999876 47777777666555554444443
No 236
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.88 E-value=8e-08 Score=90.07 Aligned_cols=166 Identities=15% Similarity=0.049 Sum_probs=132.0
Q ss_pred HHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhccc-CCchhhHHHHHHHHHHHHHHHhhh
Q 009409 122 AFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSLATALLPLLA 200 (535)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~ 200 (535)
.+-++.+..+..-.++|.+..|.|+|..+.|++.+...+......+....+.+|. ++|+..+...+++.++.+.+.+..
T Consensus 216 fmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P 295 (395)
T COG2807 216 FMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAP 295 (395)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 3334556667778889999999999999999999999999999999999999965 567777777677667766665444
Q ss_pred hhhhHHHHHHHHhhhccCCchhhHHHHhhhccc-ccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc-chhHHHHHHHHH
Q 009409 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLL 278 (535)
Q Consensus 201 ~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~~~~ 278 (535)
.+ ..+...++.|+|.+..++....++.+..+ +++.++..+..+..+.+=..+||.+.|++.|.. +|+..++..+..
T Consensus 296 ~~--~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~ 373 (395)
T COG2807 296 GQ--LPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALA 373 (395)
T ss_pred hh--HHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHH
Confidence 33 22222599999999999999999988874 567788888888888888999999999999875 599999888877
Q ss_pred HHHHHHHhhhc
Q 009409 279 GIAWFSGFKIL 289 (535)
Q Consensus 279 ~~~~~~~~~~~ 289 (535)
.+++.+.-+..
T Consensus 374 ~i~m~i~Gl~a 384 (395)
T COG2807 374 TLLMLIFGLRA 384 (395)
T ss_pred HHHHHHHHhhc
Confidence 77666554443
No 237
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.85 E-value=7.6e-08 Score=94.34 Aligned_cols=179 Identities=13% Similarity=0.094 Sum_probs=135.2
Q ss_pred cHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhC----CChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHH
Q 009409 335 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELS----LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR 410 (535)
Q Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g----~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 410 (535)
.|.++.+...-+.--+++|++...+..|+...++ ++.+++.-++..+....=+..+++||++||+-.+ |
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~-------~ 92 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGT-------R 92 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcch-------h
Confidence 4677788888899999999999999999988888 9988887777766666667788899999998654 3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcC-CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcc--hhHHHHHHHHhhhhhhhHH
Q 009409 411 KICQTIAFLSPAVCMTLSSIDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY--ASILLGITNTVGAVPGIVG 487 (535)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~lg~~ig 487 (535)
..+.++.++..+.-+++.... ......++++.+++++.+.+=+.....+.+..++++ |-.++++..+..++|+.++
T Consensus 93 -~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~ 171 (498)
T COG3104 93 -RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIA 171 (498)
T ss_pred -HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHH
Confidence 334444555555555444432 345567777778888888888877777777766533 6778888999999999999
Q ss_pred HHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhh
Q 009409 488 VALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 488 p~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 522 (535)
|.+.+++.+.+| |...|...++-..++.+..++.
T Consensus 172 p~i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 172 PIITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred HHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999985 9999988776555544443333
No 238
>PRK09669 putative symporter YagG; Provisional
Probab=98.84 E-value=2.3e-08 Score=101.99 Aligned_cols=141 Identities=10% Similarity=0.054 Sum_probs=101.4
Q ss_pred hhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhh-hhhhhHH
Q 009409 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-AGFMPGL 206 (535)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~l 206 (535)
......+...+.+.++.--+....+.+.....++..++.+++++++||+|+|+.+..+.++.+++.+..... .++.+.+
T Consensus 243 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (444)
T PRK09669 243 TAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLI 322 (444)
T ss_pred HHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHH
Confidence 333333333344434332233444556666677778888999999999999999998877665444333222 3556667
Q ss_pred HHHHHHhhhccCCchhhHHHHhhhcccc-------cchhhHHHHHHHhhhhHHHHHhhhHHHhccccch
Q 009409 207 VLSRVLVGIGEGVSPSAATDLIARSIPL-------EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (535)
Q Consensus 207 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (535)
++..++.|++.+...+...++++|..+. +..|..++..+....+|..+|+.++|.+.+..|+
T Consensus 323 ~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 323 FALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8888899999999999999999998852 2346678889999999999999999998876665
No 239
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.84 E-value=1.1e-08 Score=102.89 Aligned_cols=179 Identities=14% Similarity=0.032 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhc-ccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCc---------hhhH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR---------KVLQ 183 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r---------~~~~ 183 (535)
..+..+.+..+........+..+.|.+.+ -+|++..+.|++.++..+...+..+++|.++||.-+| ..-.
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 34556677777888888889999999555 5899999999999999999999999999999987552 2333
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCc-hhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHh
Q 009409 184 TGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS-PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (535)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (535)
++....+++.+++++.........+.-+..+.+..+. .+....-..|.. ++.-+..+|+.+....++.+++|.+.+.+
T Consensus 338 i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~ 416 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGII 416 (466)
T ss_pred HHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeE
Confidence 4445555555555444422221222222222222222 233333333334 48889999999999999999999999999
Q ss_pred ccc---cchhHHHHHHHHHHHHHHHHhhhcccCC
Q 009409 263 IEN---LGWESVFYIFGLLGIAWFSGFKILQEGE 293 (535)
Q Consensus 263 ~~~---~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 293 (535)
.+. ..||++|++.+++.++..+++.++-..+
T Consensus 417 ~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e 450 (466)
T KOG2532|consen 417 VTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGE 450 (466)
T ss_pred eCCCCHHHHHHHHHHHHHHHHHhchheeEeecCc
Confidence 842 4799999999998888776666664333
No 240
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.83 E-value=2.1e-08 Score=94.17 Aligned_cols=143 Identities=12% Similarity=0.131 Sum_probs=101.7
Q ss_pred hHHHHHhhHHHHHHHhC----CChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHH
Q 009409 352 HYTCLSWLPTYFSEELS----LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL 427 (535)
Q Consensus 352 ~~~~~~~~p~~l~~~~g----~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (535)
.|.+.++....++...| -+...+|++-+.++++..+.++..|.++||+||| ..+.++.+..++...+
T Consensus 44 L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRk---------pvll~c~~~va~s~ll 114 (451)
T KOG2615|consen 44 LYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRK---------PVLLACLIGVALSYLL 114 (451)
T ss_pred hhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCch---------HHHHHHHHHHHHHHHH
Confidence 34444555444544333 3556789999999999999999999999999964 5555666655655555
Q ss_pred hhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhc---ccCcchHH
Q 009409 428 SSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD---STHSWSMS 504 (535)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~---~~g~~~~~ 504 (535)
.... .+....++.-++.|++-+. ......++.+.+++++|+.+++.+++..++|.++||.++|++.+ ..|+|..+
T Consensus 115 ~~~S-~~F~afv~aR~l~Gi~kgn-l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~a 192 (451)
T KOG2615|consen 115 WALS-RNFAAFVLARFLGGIFKGN-LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFA 192 (451)
T ss_pred HHHH-HHHHHHHHHHHhhhhccCc-hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchH
Confidence 4442 2222223335666666554 44556677788899999999999999999999999999999998 56666554
Q ss_pred H
Q 009409 505 L 505 (535)
Q Consensus 505 ~ 505 (535)
+
T Consensus 193 l 193 (451)
T KOG2615|consen 193 L 193 (451)
T ss_pred H
Confidence 4
No 241
>PTZ00207 hypothetical protein; Provisional
Probab=98.79 E-value=7.3e-07 Score=92.04 Aligned_cols=162 Identities=10% Similarity=-0.002 Sum_probs=103.1
Q ss_pred hhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHh
Q 009409 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS 428 (535)
Q Consensus 349 ~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (535)
....|.+..+.|. +++.+|++..+.+.+...... ...+.++.|++.||+|+| ....++.+...+..++.
T Consensus 40 ~g~~y~fsv~s~~-L~~~lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~G~R---------~vllig~ll~~iG~ll~ 108 (591)
T PTZ00207 40 TSFMYAFNLISGA-MQARYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYLGPR---------PIFVLSMTVFCLGTLLF 108 (591)
T ss_pred HHHHHHHHHHHHH-HHHHhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHH
Confidence 3344566666665 456789999999988765333 335666789999999864 34444444444444444
Q ss_pred hhcC-----CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchH
Q 009409 429 SIDL-----GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM 503 (535)
Q Consensus 429 ~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~ 503 (535)
.... .+.+.+.+..++.|++.+...+.......+.+ |++||.+.|+......+|+++.+.+...+... ++..
T Consensus 109 ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~ 185 (591)
T PTZ00207 109 ALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSA 185 (591)
T ss_pred HHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHH
Confidence 3321 23333445556667666655565555555545 68899999999999999998655555444432 4666
Q ss_pred HHHHHHHHHHHHHHhhhhhcc
Q 009409 504 SLFAPSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~ 524 (535)
.|++.+++.++..++.+.+.+
T Consensus 186 ~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 186 YFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHHHHHHHhhee
Confidence 677766666666555555544
No 242
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.79 E-value=1.5e-07 Score=90.48 Aligned_cols=161 Identities=34% Similarity=0.496 Sum_probs=127.5
Q ss_pred HHHHHHHhhhhhhHhhhhhhhcccCCCc--cchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHh
Q 009409 121 LAFVICNMDKVNLSVAIIPMSHRFGWNS--SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (535)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (535)
...+....+........+.+..+++.+. ...++..+.+.++..++.++.|.+.||+|||+.+..+.....++.++...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 88 (338)
T COG0477 9 LAALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLAL 88 (338)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHh
Confidence 3344444666777778888888887766 58899999999999999999999999999998888887654455444433
Q ss_pred hhh-hhhHHHHHHHHhhhccCCchhhHHHHhhhcccc-cchhhHHHHHHH-hhhhHHHHHhhhHHHhccc--cchhHHHH
Q 009409 199 LAG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFG-GLSFGSVAGLLLAPPIIEN--LGWESVFY 273 (535)
Q Consensus 199 ~~~-~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~--~gw~~~f~ 273 (535)
... +.+.+++.|++.|++.+...+...+++.+++++ ++|+...+.... ...+|..++|.+++.+... .+||+.|+
T Consensus 89 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (338)
T COG0477 89 APNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFL 168 (338)
T ss_pred CccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 333 478899999999999999999999999999987 678999999888 5888999999888777654 67999777
Q ss_pred HHHHHHHH
Q 009409 274 IFGLLGIA 281 (535)
Q Consensus 274 ~~~~~~~~ 281 (535)
+.......
T Consensus 169 ~~~~~~~~ 176 (338)
T COG0477 169 LAALLGLL 176 (338)
T ss_pred HHHHHHHH
Confidence 76655543
No 243
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.76 E-value=1.8e-08 Score=96.95 Aligned_cols=183 Identities=13% Similarity=0.046 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhH--------HHHHH-HHHHHhhhccchhhhcccCCchhhHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGL--------VQSSF-FWGYALSQLPGGWLAKIFGGRKVLQT 184 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~--------~~s~~-~~~~~~~~~~~g~l~dr~g~r~~~~~ 184 (535)
+.++..+..+|+.....+..+.....+.+..|+.+.+... ...+. ..++..+-.+...++|+.|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5566667778877777777777788888888876555443 11111 22333466778899999999999999
Q ss_pred HHHHHHHHHHHHHhhhhh----hhHHHHHHHHhhh-ccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhH
Q 009409 185 GVLIWSLATALLPLLAGF----MPGLVLSRVLVGI-GEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (535)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 259 (535)
+.+++++..+.++ ...+ ...++++..+..+ +.-+.......+-+|.+|.+-|+..-|+..+.+-+|+++|....
T Consensus 384 GF~~~~i~~~~~~-~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F 462 (538)
T KOG0252|consen 384 GFFIMTIFFFVIA-GPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGF 462 (538)
T ss_pred hHHHHHHHHHHHc-CCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHh
Confidence 9999998887765 3333 1223333323222 22233445566778999999999999999999999999999999
Q ss_pred HHhcc-----ccchhHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 009409 260 PPIIE-----NLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 297 (535)
Q Consensus 260 ~~l~~-----~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (535)
.++.+ ..|.|++|++.+.+.++..+..+++||++.+..
T Consensus 463 ~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~l 505 (538)
T KOG0252|consen 463 LYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSL 505 (538)
T ss_pred hHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCH
Confidence 99998 789999999999999999999999997665443
No 244
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.73 E-value=1.3e-06 Score=83.37 Aligned_cols=159 Identities=14% Similarity=0.064 Sum_probs=117.5
Q ss_pred HHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhh--
Q 009409 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI-- 430 (535)
Q Consensus 353 ~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 430 (535)
...+..+-..+++.++++..+++++...+..+..++.+..+++.+|+|.| ..+.+++.+.++.+.++..
T Consensus 29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk---------~gi~lgL~l~avg~~lF~pAa 99 (422)
T COG0738 29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK---------AGIVLGLLLYAVGAALFWPAA 99 (422)
T ss_pred hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH---------HHHHHHHHHHHHHHHHHhhhh
Confidence 33444455566689999999999999999999999999999999999965 3444555555555555432
Q ss_pred cCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcc-------------
Q 009409 431 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS------------- 497 (535)
Q Consensus 431 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~------------- 497 (535)
...+....++++++.+.+.+........++...-+++..+.-+.+...+..+|++++|.+++.+..+
T Consensus 100 ~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~ 179 (422)
T COG0738 100 SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILA 179 (422)
T ss_pred hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHH
Confidence 2233344455667788888888888888888878888889999999999999999999999999883
Q ss_pred -----cCcchHHHHHHHHHHHHHHHhhh
Q 009409 498 -----THSWSMSLFAPSIFFYLTGTIVW 520 (535)
Q Consensus 498 -----~g~~~~~~~~~~~~~~~~~~~~~ 520 (535)
..++...+...+..+++..+...
T Consensus 180 ~~~~~~~~v~~pYl~~~~~lvll~v~~~ 207 (422)
T COG0738 180 IKGADASSVQFPYLILAGLLVLLAVLIL 207 (422)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 23456666666554444444333
No 245
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.71 E-value=1.2e-07 Score=93.84 Aligned_cols=154 Identities=16% Similarity=0.141 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhhhh-hcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHH
Q 009409 114 KLIGTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (535)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (535)
+-+...++.+++.....++.+.....+ ..-+|.+.....+.......+..++.+++.++.+|+|+|+++..+.++..++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVG 315 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHH
Confidence 444445556666666777777666664 3446777777778888888888888999999999999999999999999999
Q ss_pred HHHHHhhh-hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccc-------cchhhHHHHHHHhhhhHHHHHhhhHHHhcc
Q 009409 193 TALLPLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-------EERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (535)
Q Consensus 193 ~~~~~~~~-~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (535)
.++..+.. ++...+++..++.++|.+...+..+++++|..+- +.-|...+......-+|.+++..+.|++.+
T Consensus 316 ~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 316 YLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred HHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88875544 4567788888999999999999999999987642 334778888888888999999988888876
Q ss_pred ccc
Q 009409 265 NLG 267 (535)
Q Consensus 265 ~~g 267 (535)
..|
T Consensus 396 ~~G 398 (467)
T COG2211 396 AIG 398 (467)
T ss_pred HcC
Confidence 544
No 246
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.70 E-value=3.3e-05 Score=78.08 Aligned_cols=277 Identities=11% Similarity=0.013 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHH-HHHhhhccchhhhcccCCchhhHHHHHHHH
Q 009409 113 YKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (535)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (535)
++-++.+.+.+|+..+..+..-..=.. +.... .+..+..+-....+ ...++..+..++++++++.+++-+....+.
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~--gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~ 100 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTILRDLKDTLVVTAQ--GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFL 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 344445555555555554444333222 11111 55666666665555 344567788999999999998887766655
Q ss_pred HHHHHHHhhh--------hh----------------------hhHHHHHHHHhhhccCCchh-hHHHHhhhcccccchhh
Q 009409 191 LATALLPLLA--------GF----------------------MPGLVLSRVLVGIGEGVSPS-AATDLIARSIPLEERSR 239 (535)
Q Consensus 191 ~~~~~~~~~~--------~~----------------------~~~l~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~r~~ 239 (535)
....+.+++- ++ .|...+...+.-+-.+...+ .-+.+..|.++.+|..+
T Consensus 101 ~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKR 180 (491)
T PF03219_consen 101 GFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKR 180 (491)
T ss_pred HHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 5554444320 00 01222333333333334333 46888999999999999
Q ss_pred HHHHHHHhhhhHHHHHhhhHHHhcc---------ccchhHHHHHHH----HHHHHHHHHhhhcccCCCCCCCCCCcchhh
Q 009409 240 AVSFVFGGLSFGSVAGLLLAPPIIE---------NLGWESVFYIFG----LLGIAWFSGFKILQEGETSNGATLAPRSNY 306 (535)
Q Consensus 240 ~~~~~~~~~~~g~~~g~~~~~~l~~---------~~gw~~~f~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (535)
..+++..+.++|.++++.+..++.+ ...|...+.... +.+++.......+.+....++... +..+.
T Consensus 181 fYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~-~~~~~ 259 (491)
T PF03219_consen 181 FYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFY-PSAKK 259 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccc-hhhhc
Confidence 9999999999999999999988877 123554333222 222222333333332211111110 00000
Q ss_pred hhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhH---HHHHhhHHH
Q 009409 307 INMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEA---AWVSILPPL 383 (535)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~---g~~~~~~~~ 383 (535)
..++ ..+..-...++.++++|.+..+.+...+++.....+....-..+++.+.-+.... |-.....++
T Consensus 260 ~kk~---------k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGi 330 (491)
T PF03219_consen 260 KKKK---------KPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGI 330 (491)
T ss_pred cccc---------CCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH
Confidence 0000 0000112346788899999998888888888777776666666665543332222 334455566
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 009409 384 ASVLVTSIAAQFADNLIA 401 (535)
Q Consensus 384 ~~~~~~~~~g~l~dr~~~ 401 (535)
..++..++++.+.+|+|-
T Consensus 331 vtii~~~l~~~iir~~GW 348 (491)
T PF03219_consen 331 VTIIMMFLSSNIIRRFGW 348 (491)
T ss_pred HHHHHHHHHHHHHHHhhH
Confidence 666666777888888774
No 247
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.69 E-value=4.2e-08 Score=96.23 Aligned_cols=167 Identities=17% Similarity=0.110 Sum_probs=141.6
Q ss_pred HHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhh
Q 009409 122 AFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG 201 (535)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 201 (535)
..++.+.+...+..++-...+|.|-.....|........+-++.-++.+++.+|+|+-+++..++.+.++=.+..+ ..+
T Consensus 379 ~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S-~L~ 457 (618)
T KOG3762|consen 379 VAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYS-YLQ 457 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHH-Hhc
Confidence 3334445555555666667888998888889888888888888889999999999999999999999888777765 567
Q ss_pred hhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHh-hhhHHHHHhhhHHHhccccchhHHHHHHHHHHH
Q 009409 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGG-LSFGSVAGLLLAPPIIENLGWESVFYIFGLLGI 280 (535)
Q Consensus 202 ~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~ 280 (535)
|.|+.+-.-+++|+..+.++....+|+++..||+-|+.+.++.... .++|-.+|.++||.+.+.+|-|..|++.++.++
T Consensus 458 n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl 537 (618)
T KOG3762|consen 458 NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACL 537 (618)
T ss_pred CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHH
Confidence 7799999999999999999999999999999999999999997764 569999999999999999999999999998887
Q ss_pred HHHHHhhhc
Q 009409 281 AWFSGFKIL 289 (535)
Q Consensus 281 ~~~~~~~~~ 289 (535)
+.++....+
T Consensus 538 ~~l~~~~~i 546 (618)
T KOG3762|consen 538 VTLALFISI 546 (618)
T ss_pred HHHHHHHHh
Confidence 766555443
No 248
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.68 E-value=0.00017 Score=70.87 Aligned_cols=276 Identities=12% Similarity=-0.008 Sum_probs=156.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccC---CCccchhHHHHHHHH-HHHhhhccchhhhcccCCchhhHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFG---WNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQTGVL 187 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~~ 187 (535)
.++-++.+.+.+++..+..+..- .+.+.+. ..+..+.++-+...+ +..+..++.+++.+++.+.+++-+.+.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~ 100 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLR----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILG 100 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 34444444444444444433333 3444443 356667788888877 666888999999999999999887777
Q ss_pred HHHHHHHHHHhhhh--------h-----------h------------hHHHHHHHHhhhccCCchh-hHHHHhhhccccc
Q 009409 188 IWSLATALLPLLAG--------F-----------M------------PGLVLSRVLVGIGEGVSPS-AATDLIARSIPLE 235 (535)
Q Consensus 188 ~~~~~~~~~~~~~~--------~-----------~------------~~l~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~ 235 (535)
.+....+++++.-. + . |...+...+.-+-.+.... .-+....|....+
T Consensus 101 ~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ 180 (509)
T COG3202 101 FFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIE 180 (509)
T ss_pred HHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 66666655544321 0 0 2222222222232233333 4567778888889
Q ss_pred chhhHHHHHHHhhhhHHHHHhhhHHHhcccc-c---------hhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchh
Q 009409 236 ERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-G---------WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSN 305 (535)
Q Consensus 236 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g---------w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (535)
|..+-+++++.+.+++..++..+..++.++. . .+..+.+.++.+++++....++.+.-..++....+..+
T Consensus 181 eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~ 260 (509)
T COG3202 181 EAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKK 260 (509)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhc
Confidence 9999999999999999999999998887632 1 34445555555555555555443322211110000000
Q ss_pred hhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHH---HHHhhHH
Q 009409 306 YINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAA---WVSILPP 382 (535)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g---~~~~~~~ 382 (535)
..+.++ .+..-...++.+.++|.++.+.+...+++.+...+-...-.-.++.+-.+.+... .+....+
T Consensus 261 kk~~~k---------~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tg 331 (509)
T COG3202 261 KKKKKK---------LKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTG 331 (509)
T ss_pred cccccc---------ccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHH
Confidence 000000 0000112457788899999888888888877776655444444444433333332 2333444
Q ss_pred HH-HHHHHHHHHHHHHHHH
Q 009409 383 LA-SVLVTSIAAQFADNLI 400 (535)
Q Consensus 383 ~~-~~~~~~~~g~l~dr~~ 400 (535)
+. .++...+++.+.+|.|
T Consensus 332 vv~~v~~~~~~s~~ir~~G 350 (509)
T COG3202 332 VVSLVVFLFPGSNLIRRVG 350 (509)
T ss_pred HHHHHHHHhhhHHHHHHhh
Confidence 44 3445566777777765
No 249
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.65 E-value=7.2e-08 Score=98.60 Aligned_cols=151 Identities=14% Similarity=0.101 Sum_probs=119.3
Q ss_pred hcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhh---------hhhhHHHHHHH
Q 009409 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA---------GFMPGLVLSRV 211 (535)
Q Consensus 141 ~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~~~ 211 (535)
.+.+|.++.+.|.+.+...++..++....+++.+|++.|+++.++.++.+++.+...... ++.+.++...+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 357899999999999999999999999999999999999999999988877764432111 22234556667
Q ss_pred HhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccc-----hhHHHHHHHHHHH---HHH
Q 009409 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-----WESVFYIFGLLGI---AWF 283 (535)
Q Consensus 212 ~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-----w~~~f~~~~~~~~---~~~ 283 (535)
+.+++.+........++++..|++.+|+..++..+..++|..+++.+++.+.+..| ++..+....+..+ +.+
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l 439 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPL 439 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHH
Confidence 88888888888889999999999999999999999999999999999999998877 6555554444332 333
Q ss_pred HHhhhccc
Q 009409 284 SGFKILQE 291 (535)
Q Consensus 284 ~~~~~~~~ 291 (535)
....++|+
T Consensus 440 ~~~~llP~ 447 (468)
T TIGR00788 440 PLLHLLPR 447 (468)
T ss_pred HHHHhCCC
Confidence 33345564
No 250
>PRK11462 putative transporter; Provisional
Probab=98.59 E-value=2.3e-06 Score=87.44 Aligned_cols=155 Identities=8% Similarity=-0.002 Sum_probs=100.9
Q ss_pred HHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHH
Q 009409 341 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS 420 (535)
Q Consensus 341 ~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 420 (535)
..+..+........+..++..|+.+..|+++..+|.+..+.-+.-.+.-++.|+++||...|.-+ .|.++. .+.+.
T Consensus 14 Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr---~rp~il-~g~i~ 89 (460)
T PRK11462 14 YGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGK---FRPWVL-FGALP 89 (460)
T ss_pred hccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCC---cchhHh-HHHHH
Confidence 33444455566667778899999999999999999999999999999999999999986543211 133333 33222
Q ss_pred HHHHHHHhhhcCCC-----cHHHHHHHHHHHHHHhhhhhhhhhhhhhc-cCCcchhHHHHHHHHhhhhhhhHHHHHHHHH
Q 009409 421 PAVCMTLSSIDLGL-----PHWEIVGILTAGLALSSFALSGLYCTHQD-ISPEYASILLGITNTVGAVPGIVGVALTGYL 494 (535)
Q Consensus 421 ~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l 494 (535)
.++.+.+....++. ..+..+..+++..+......+......+. -++++|++..+.......+|..+++.+...+
T Consensus 90 ~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~pl 169 (460)
T PRK11462 90 FGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPL 169 (460)
T ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333322222221 12333333444555555555544444443 3478899999999999999988888887666
Q ss_pred hcccC
Q 009409 495 LDSTH 499 (535)
Q Consensus 495 ~~~~g 499 (535)
.+..|
T Consensus 170 v~~~g 174 (460)
T PRK11462 170 VNLIG 174 (460)
T ss_pred HHHhC
Confidence 65443
No 251
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.58 E-value=8.5e-06 Score=79.98 Aligned_cols=374 Identities=10% Similarity=0.006 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHhhhhhhHhhhhhhhcc--cCCCccchhHHHHHHHHHHHhhhccchhhhc-----ccCCchhhHHH-HHH
Q 009409 117 GTTSLAFVICNMDKVNLSVAIIPMSHR--FGWNSSVAGLVQSSFFWGYALSQLPGGWLAK-----IFGGRKVLQTG-VLI 188 (535)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~d-----r~g~r~~~~~~-~~~ 188 (535)
.++.+.|++++.-.......+|.+.++ -+.|.++.+... +....+. .-++|.++.| |+||||..++= ..+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fS-la~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l 80 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFS-LASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYL 80 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeee-eeechhH-HHHhhhhhhhhhcccccCCcchhhhHHHHH
Confidence 356677888887776666678888888 788888876432 2222222 3456666666 79999876643 233
Q ss_pred HHHHHHHHHhhhh------------------h-----hhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHH
Q 009409 189 WSLATALLPLLAG------------------F-----MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF 245 (535)
Q Consensus 189 ~~~~~~~~~~~~~------------------~-----~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 245 (535)
.++..+..+...+ . ...+....++.=+..+.-..+.....-.+..+++++.+..-..
T Consensus 81 ~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqt 160 (544)
T PF13000_consen 81 SGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQT 160 (544)
T ss_pred HHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHH
Confidence 3333333222110 0 0012233333334444444555555555667788888888888
Q ss_pred HhhhhHHHHHhhhHHHhccc----------------cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCC-CCCcchhhhh
Q 009409 246 GGLSFGSVAGLLLAPPIIEN----------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGA-TLAPRSNYIN 308 (535)
Q Consensus 246 ~~~~~g~~~g~~~~~~l~~~----------------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 308 (535)
.+.++|..++-.+.-.+-+. ..-.....+.|.+.++..+...+++++++.... ...+..+..+
T Consensus 161 vG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~ 240 (544)
T PF13000_consen 161 VGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSD 240 (544)
T ss_pred hHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCcccccccccc
Confidence 88888888776665444320 111222333444444444444455444332111 1100000000
Q ss_pred ---hhhh-hhhhHH---HhccCCCC---CcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHH
Q 009409 309 ---MKKS-LSASLE---EMGESLKD---VPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS 378 (535)
Q Consensus 309 ---~~~~-~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~ 378 (535)
++.. ..++.+ +.+...-+ ..+.+++|-|.+..+.+..+..-.++.+.-.....-+.| .|++.++.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~ 319 (544)
T PF13000_consen 241 GKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLV 319 (544)
T ss_pred ccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHH
Confidence 0000 000000 00000000 123456777888888888888877777766667777765 599988877554
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCCc-------------hh-----------HHHHHHHHHH-HHHHHH-HHH-hhhc
Q 009409 379 ILPPLASVLVTSIAAQFADNLIATGVET-------------TM-----------VRKICQTIAF-LSPAVC-MTL-SSID 431 (535)
Q Consensus 379 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~-------------~~-----------~~~~~~~~~~-~~~~~~-~~~-~~~~ 431 (535)
. ..++..++.|+++.|+.+.+.-. .+ .+.++..... +++++. ... ..+.
T Consensus 320 l----i~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP 395 (544)
T PF13000_consen 320 L----IDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFP 395 (544)
T ss_pred H----HhhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCC
Confidence 3 34555566666666664322100 00 1111111110 111111 111 1111
Q ss_pred -CC-CcHHHHHHH----HHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcc
Q 009409 432 -LG-LPHWEIVGI----LTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 497 (535)
Q Consensus 432 -~~-~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~ 497 (535)
.+ .+.+.++.. ++..+............-++..+|..-|+.+.+.|++.|+|+-.-..+.=++.|.
T Consensus 396 ~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 396 SDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 11 112222111 1122222223333444445667899999999999999999998887777677663
No 252
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.57 E-value=3.4e-05 Score=79.72 Aligned_cols=155 Identities=19% Similarity=0.121 Sum_probs=121.4
Q ss_pred hHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcc-cCCchhhHHHHHHHHHHHHHHHhhhhh---------
Q 009409 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLATALLPLLAGF--------- 202 (535)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~--------- 202 (535)
..+.+..+..++|.+...+.-..+.+.-.....++.+++++|- +||-+++.++.++..++..+..+.+.-
T Consensus 57 ~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK 136 (571)
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence 3566777888899888888888888888888899999999997 589999999888877775544332211
Q ss_pred ---------------hhHHHHHHHHhhhccCCchhhHHHHhhhccc---cc-c--hhhHHHHHHHhhhhHHHHHhhhHHH
Q 009409 203 ---------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIP---LE-E--RSRAVSFVFGGLSFGSVAGLLLAPP 261 (535)
Q Consensus 203 ---------------~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~---~~-~--r~~~~~~~~~~~~~g~~~g~~~~~~ 261 (535)
...++...-+..+|.|+.-|...+.-+|-++ ++ + +..-+.++....++|..++..+..+
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vy 216 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVY 216 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHh
Confidence 1245666677788999999999999999887 32 2 2367888899999999999999999
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhh
Q 009409 262 IIENLGWESVFYIFGLLGIAWFSGFK 287 (535)
Q Consensus 262 l~~~~gw~~~f~~~~~~~~~~~~~~~ 287 (535)
+-++.||.+.|.+..+..++.+++++
T Consensus 217 iq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 217 IQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred hhhcccceeeccHHHHHHHHHHHHHH
Confidence 98899999999998887665554443
No 253
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.56 E-value=5.5e-06 Score=85.18 Aligned_cols=179 Identities=14% Similarity=0.160 Sum_probs=115.6
Q ss_pred hhcHHHHHHHHHHHHHhhhhHHH----HHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchh
Q 009409 333 FRSKAVWAMIYAHFCGSWGHYTC----LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM 408 (535)
Q Consensus 333 ~~~~~~~~~~l~~~~~~~~~~~~----~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 408 (535)
+++++++..+....+.....+.. ...++ ++...+|-+ ....++.....++..++.++.|+++|.+|||
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~-~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr------ 108 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILP-YINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRR------ 108 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHH-HHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcch------
Confidence 35566665544444333332222 23344 444456765 4556777888899999999999999999965
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHH
Q 009409 409 VRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGV 488 (535)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp 488 (535)
...+.+.++..+..+.... .++....+.+..+.|++.+... .....+.+..|.+.|....++.....-....++|
T Consensus 109 ---~~~i~g~~l~vvG~Iv~at-A~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~ 183 (599)
T PF06609_consen 109 ---YFFIIGSLLGVVGSIVCAT-AQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISP 183 (599)
T ss_pred ---HHHHHHHHHHHhHHHHhhc-CCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccH
Confidence 5555555555555554443 3455566777888887755443 3344466778888898888777665555555777
Q ss_pred HHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhccC
Q 009409 489 ALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAS 525 (535)
Q Consensus 489 ~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (535)
.++..+... ++|++.|++.++...+..++.+++++.
T Consensus 184 ~ia~~~~~~-~~WRw~~~~~~i~~~i~~vl~~~fY~P 219 (599)
T PF06609_consen 184 LIAQLFAAH-SGWRWIFYIFIIWSGIALVLIFFFYFP 219 (599)
T ss_pred HHHHHhccC-CCcchHHHHHHHHHHHHHHHHHHHhCC
Confidence 777766655 479999998888766666665555543
No 254
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.55 E-value=1.9e-06 Score=82.96 Aligned_cols=150 Identities=19% Similarity=0.163 Sum_probs=122.6
Q ss_pred hhcccCCCccchhHHHHHHHHHHHhhhccchhhhc-ccCCchhhHHHHHHHHHHHHHHH--hhhhhhhHHHHHHHHhhhc
Q 009409 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK-IFGGRKVLQTGVLIWSLATALLP--LLAGFMPGLVLSRVLVGIG 216 (535)
Q Consensus 140 ~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~d-r~g~r~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~G~~ 216 (535)
=-+-||++..+..-+.+....+..++-...|++.. |.+++++-.+++.+..++..+.. ....+.+.+...-++.|++
T Consensus 235 gg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g 314 (403)
T PF03209_consen 235 GGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLG 314 (403)
T ss_pred hhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHh
Confidence 34558999999999999999999999999998887 67888888788777666554432 2334567888999999999
Q ss_pred cCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccc----------cchhHHHHHHHHHHHHHHHHh
Q 009409 217 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN----------LGWESVFYIFGLLGIAWFSGF 286 (535)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~----------~gw~~~f~~~~~~~~~~~~~~ 286 (535)
.|.+.....+.+.+...+++.|..+|.+.....++..++..++|.+.|. .+|..+|.+.++..++.+++.
T Consensus 315 ~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 315 NGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred hhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987652 357788888887776665554
Q ss_pred hhc
Q 009409 287 KIL 289 (535)
Q Consensus 287 ~~~ 289 (535)
..+
T Consensus 395 ~~l 397 (403)
T PF03209_consen 395 GRL 397 (403)
T ss_pred HHh
Confidence 433
No 255
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.51 E-value=1.2e-06 Score=90.91 Aligned_cols=183 Identities=19% Similarity=0.108 Sum_probs=127.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHH
Q 009409 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (535)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (535)
+++.++.+.+..|.+..+.+.+..+.+.+.+..|.+... .+...+..+...++..++..+.||+|||+.++.+...+.+
T Consensus 293 ~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~ 371 (513)
T KOG0254|consen 293 RKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSI 371 (513)
T ss_pred HHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHH
Confidence 456666777778778877888888899999998887554 5555566666677778889999999999999999999988
Q ss_pred HHHHHHhhhhh------------hhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhH
Q 009409 192 ATALLPLLAGF------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (535)
Q Consensus 192 ~~~~~~~~~~~------------~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 259 (535)
+.++++..... +..+....+.......+..+..+.+.+|.+|.+-|+++.++......+...+-....
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~ 451 (513)
T KOG0254|consen 372 CLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFF 451 (513)
T ss_pred HHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 88776543211 112222233333333444567778899999999999999998888887777665555
Q ss_pred HHhccccchhHHHHHHHHHHHHHH--HHhhhcccCCCC
Q 009409 260 PPIIENLGWESVFYIFGLLGIAWF--SGFKILQEGETS 295 (535)
Q Consensus 260 ~~l~~~~gw~~~f~~~~~~~~~~~--~~~~~~~~~~~~ 295 (535)
..+.+..++...|...+..+.+.. ...+++||++..
T Consensus 452 ~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~ 489 (513)
T KOG0254|consen 452 PFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGL 489 (513)
T ss_pred HHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCC
Confidence 555554444556666555554443 355666665543
No 256
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.41 E-value=6.4e-06 Score=69.52 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=97.9
Q ss_pred CCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhH
Q 009409 145 GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAA 224 (535)
Q Consensus 145 g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~ 224 (535)
+++...--.-.++.+....+..++.+.+.+++|.|+.++++.+.+.+-... .+-++.+.++..-++.|++.+..++..
T Consensus 33 ~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~--~~~~~~~~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 33 SISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS--FFYPNSYTLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred cccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHhhhhHHhhHhh
Confidence 344444455667777788888999999999999999999999988765544 344556889999999999999999999
Q ss_pred HHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhc
Q 009409 225 TDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII 263 (535)
Q Consensus 225 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 263 (535)
..++.+..+++++++..+++......+.++|.++...+.
T Consensus 111 g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 111 GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988876554
No 257
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.33 E-value=1.1e-05 Score=81.81 Aligned_cols=150 Identities=11% Similarity=0.043 Sum_probs=116.8
Q ss_pred HHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHH
Q 009409 365 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILT 444 (535)
Q Consensus 365 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (535)
+..++...+.+.+.+++.++.+++.+.++.+.||+..+ +.+...++......++ ... ..+.+..++.-++
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls--------~~l~~~~~~w~~~~~~-~~~-~~s~~~~ialr~l 143 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLS--------KGLSVSGILWGLFGFL-TAA-VHSFPGLIALRFL 143 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChH--------HHHHHHHHHHHHHHHH-HHH-HhhhHHHHHHHHH
Confidence 55677788889999999999999999999999999632 2222222222222212 111 3445566777889
Q ss_pred HHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhc------ccCcchHHHHHHHHHHHHHHHh
Q 009409 445 AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD------STHSWSMSLFAPSIFFYLTGTI 518 (535)
Q Consensus 445 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~------~~g~~~~~~~~~~~~~~~~~~~ 518 (535)
.|++-+...|....++..-+.+++++..+|+.++...+|.++|+.++..+.+ .. +|.+.|++.+++.++.+++
T Consensus 144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~-gW~~~FiI~G~i~~~~gi~ 222 (495)
T KOG2533|consen 144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA-GWRWLFIIEGVITLVLGIV 222 (495)
T ss_pred HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC-CceeehhHHHHHHHHHHhe
Confidence 9999999999999999998999999999999999999999999999988643 23 5999999999988888888
Q ss_pred hhhhccC
Q 009409 519 VWLAFAS 525 (535)
Q Consensus 519 ~~~~~~~ 525 (535)
+++..+.
T Consensus 223 ~f~~lp~ 229 (495)
T KOG2533|consen 223 VFFFLPD 229 (495)
T ss_pred EEEEecC
Confidence 7777654
No 258
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.31 E-value=1.6e-06 Score=63.60 Aligned_cols=72 Identities=21% Similarity=0.158 Sum_probs=63.6
Q ss_pred HHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (535)
.+...+|+.+.....+.|++|.+.++.|+|..++|.+.++..+...++++++|.++||+++++..+....++
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 345567777788888999999999999999999999999999999999999999999999999888765543
No 259
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.30 E-value=1.5e-06 Score=64.08 Aligned_cols=76 Identities=24% Similarity=0.322 Sum_probs=68.0
Q ss_pred HHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhh
Q 009409 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF 202 (535)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 202 (535)
.++++..+++.+|.+.+|.++|.++.|++.+..++||.+|.+...++.++..+++.+..+.+...+..+.++ ..++
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma-~~~~ 79 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMA-LTHS 79 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH-HHhc
Confidence 457889999999999999999999999999999999999999999999998889999999888877777765 4444
No 260
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.25 E-value=5.9e-05 Score=79.52 Aligned_cols=166 Identities=13% Similarity=0.077 Sum_probs=111.2
Q ss_pred hhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhh
Q 009409 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI 430 (535)
Q Consensus 351 ~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (535)
++|++...+..|+.+.+|++...+..+...+....-+..+++|+++|++-.+ + ..+.++.++..++..+...
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~-------~-~tIl~~~ii~~lG~~llai 73 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGK-------F-KTILYLSIVYVVGHALLSF 73 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------H-HHHHHHHHHHHHHHHHHHh
Confidence 4577778888898888999999888888777777778888999999998654 2 2233333333333333222
Q ss_pred cC-CC------cHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCc---chhHHHHHHHHhhhhhhhHHHHHHHHHhccc--
Q 009409 431 DL-GL------PHWEIVGILTAGLALSSFALSGLYCTHQDISPE---YASILLGITNTVGAVPGIVGVALTGYLLDST-- 498 (535)
Q Consensus 431 ~~-~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~-- 498 (535)
.. .. ....++++.+..++.+.+-+.......+.++++ .+-..+.++....++|+.+++.+.+++.+..
T Consensus 74 ~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~ 153 (654)
T TIGR00926 74 GAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC 153 (654)
T ss_pred ccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 11 10 122445566666677766666666666666543 4677888899999999999999999997543
Q ss_pred -C---cchHHHHHHHHHHHHHHHhhhhhcc
Q 009409 499 -H---SWSMSLFAPSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 499 -g---~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (535)
| +|..+|.+.+++.+++.++.....+
T Consensus 154 fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k 183 (654)
T TIGR00926 154 FGCQDCYPLAFGVPAILMILALIVFMAGSK 183 (654)
T ss_pred cccCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2 4778888877766655554444333
No 261
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.16 E-value=0.00098 Score=63.57 Aligned_cols=153 Identities=13% Similarity=0.100 Sum_probs=98.1
Q ss_pred HHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHH
Q 009409 365 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILT 444 (535)
Q Consensus 365 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (535)
+.+|++..+++.++....+.+.+...+.|.++||+|+| +.++..+.+-...++ . -..++...++++-++
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk--------~~cl~~cily~~scl-~--k~~~~~~~L~~GRvl 130 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK--------KACLLFCILYSLSCL-T--KHSSNYPVLLLGRVL 130 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch--------HHHHHHHHHHHHHHH-H--HhccccHHHHHHHHH
Confidence 46899999999999999999999999999999999975 333333333333332 2 223456667777788
Q ss_pred HHHHHhhhhhhhhhhhh-----hccCCcchhHHHHHHHHh-hhhhhhHHHHHHHHHhcccCc-chHHHHHHHHHHHHHHH
Q 009409 445 AGLALSSFALSGLYCTH-----QDISPEYASILLGITNTV-GAVPGIVGVALTGYLLDSTHS-WSMSLFAPSIFFYLTGT 517 (535)
Q Consensus 445 ~g~~~~~~~~~~~~~~~-----~~~~~~~~g~~~g~~~~~-~~lg~~igp~i~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 517 (535)
.|++........-.+.. +.+|++..+...+.+... ..+-.+....++-.+.+..+. ...+|....++++++.+
T Consensus 131 gGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~ 210 (354)
T PF05631_consen 131 GGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAV 210 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHH
Confidence 88777766555444332 235556666666666533 334445555566666665542 46677777776666666
Q ss_pred hhhhhccCCCC
Q 009409 518 IVWLAFASSKP 528 (535)
Q Consensus 518 ~~~~~~~~~~~ 528 (535)
++...+++...
T Consensus 211 ~I~~~W~ENyg 221 (354)
T PF05631_consen 211 LILKTWPENYG 221 (354)
T ss_pred HHHhcccccCC
Confidence 66555555433
No 262
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.10 E-value=3.7e-05 Score=80.31 Aligned_cols=140 Identities=16% Similarity=0.048 Sum_probs=108.3
Q ss_pred HHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHH
Q 009409 365 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILT 444 (535)
Q Consensus 365 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (535)
+....+.....+..++..++..+|.++.|.++||+||| .....+.++..++.+...+ ..+.....+.-++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk---------~~~~~~~~~~~i~~~~~a~-a~~~~~~~~~Rfl 180 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRK---------PVLLVSLLLFIIFGILTAF-APNYWMFLIFRFL 180 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccH---------HHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHH
Confidence 34566777888888999999999999999999999854 4445555555554444443 3455566667788
Q ss_pred HHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Q 009409 445 AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTI 518 (535)
Q Consensus 445 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 518 (535)
.|++.+...........+.+++++|+.+..+ ......++.+++..++++.. +|+..+++..+...+..++
T Consensus 181 ~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 181 SGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred HHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH
Confidence 8888888888888888888999999999999 88888899999999999988 5888888766655554444
No 263
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.10 E-value=0.0008 Score=67.71 Aligned_cols=58 Identities=12% Similarity=0.086 Sum_probs=45.8
Q ss_pred CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHH
Q 009409 433 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL 490 (535)
Q Consensus 433 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i 490 (535)
.+.++.++.++++|+..|...........+.+++++|..+..+++..-.+|-.+|..+
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556667778888988888877777777777888888888888888888887777765
No 264
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.08 E-value=0.0003 Score=64.51 Aligned_cols=139 Identities=15% Similarity=0.145 Sum_probs=88.6
Q ss_pred HHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHH
Q 009409 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT 426 (535)
Q Consensus 347 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (535)
......|.+..|-|. +++.+|++..+...+.....++..+ +++.|.+.|+++.+ ....++.....+...
T Consensus 13 ~~~Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~---------~~l~iG~~~~~~GY~ 81 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPW---------VVLLIGAVLGFVGYG 81 (250)
T ss_pred HhcCcccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchH---------HHHHHHHHHHHHHHH
Confidence 334445666666665 4568999999999998888888876 48899999999854 333444444444333
Q ss_pred Hhhh--cC---CCcHHHHHHHHHHH-HHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcc
Q 009409 427 LSSI--DL---GLPHWEIVGILTAG-LALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 497 (535)
Q Consensus 427 ~~~~--~~---~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~ 497 (535)
.... .. ..+.|......+++ .+...+.........+++| ++||++.|+.-....+++.+-..+...+.+.
T Consensus 82 ~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 82 LLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 2222 11 12344443333222 3323333344444455564 7899999999999999988888887777765
No 265
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.03 E-value=0.00023 Score=68.94 Aligned_cols=358 Identities=15% Similarity=0.041 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHHHHHHHHHh----hhccchhhhcccCCchhhHHHHHHHH
Q 009409 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYAL----SQLPGGWLAKIFGGRKVLQTGVLIWS 190 (535)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~----~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (535)
.....++..+-..+.++.+..+.+++.+++-.+.. .......+.+...+ ....-..+.-|..+|-.+........
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il 97 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAIL 97 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444445557777788888887776644433 33333333333333 33333444444222211111111111
Q ss_pred -HHHHHHHhh------hhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhh---HH
Q 009409 191 -LATALLPLL------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL---AP 260 (535)
Q Consensus 191 -~~~~~~~~~------~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~---~~ 260 (535)
+..+..... ...+...++.-.+.+++.+..........++ +|++.-...++ +.++++++..++ .-
T Consensus 98 ~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~----G~a~aG~l~Sl~~i~tk 172 (406)
T KOG1479|consen 98 FIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMS----GQALAGTLTSLLRILTK 172 (406)
T ss_pred HHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHh----cchhHhHHHHHHHHHHH
Confidence 111111110 1224556677778888888887777777665 55443332222 333333332222 22
Q ss_pred Hhccc--cchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhhhhhhhhhHHHhccCCCCCcHHHhhhcHHH
Q 009409 261 PIIEN--LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAV 338 (535)
Q Consensus 261 ~l~~~--~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (535)
...+. .+--..|.+..++.+++++....+++.+-.+.-.+++.+...+..+. +.+.+. ..+..+.+.++++++-.-
T Consensus 173 a~~~~~~~sA~~yF~~s~~~~llC~i~y~~l~~lpf~~yy~~~~~~~~~~l~~~-~~~~~~-~~~~~~~~~~~i~~k~~~ 250 (406)
T KOG1479|consen 173 AAFSDSRTSALIYFITSTVILLLCFVLYLVLPKLPFVRYYREKAGSIGSKLAAE-GIESDS-SLSNEDDSLWDIFKKIKD 250 (406)
T ss_pred HhcCCCCceeehhHHHHHHHHHHHHHHHHHhhcchHHHHHhhhccccccccccc-cccccc-ccccccchHHHHHHHHHH
Confidence 22221 22333334444444455555554443321111000000000000000 000000 000001133444433221
Q ss_pred HHHHHHHHHHhhhhHHHHHhhHHHHHHHhCC---ChhhHHHHHhh-HHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHH
Q 009409 339 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSL---NLTEAAWVSIL-PPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 414 (535)
Q Consensus 339 ~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~---s~~~~g~~~~~-~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 414 (535)
.. +.....+......+|-+..+..+- +.....+.... +.+...+|.+...++-++- +| ....
T Consensus 251 ~~-----~~i~lvy~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r--------~l~i 316 (406)
T KOG1479|consen 251 LA-----FNIFLVYFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPD-PR--------KLTI 316 (406)
T ss_pred Hh-----hchheeeeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCC-Cc--------eehH
Confidence 11 111222233344667776554322 23334444555 6777777766555544331 11 1111
Q ss_pred HHHHHHHHHHHHH------hhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHH
Q 009409 415 TIAFLSPAVCMTL------SSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGV 488 (535)
Q Consensus 415 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp 488 (535)
....=...+-+.. ......+..|.+....++|+..|-.......+..+.++++++-.+-.++...-..|-. ..
T Consensus 317 ~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~-~G 395 (406)
T KOG1479|consen 317 PVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLA-LG 395 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHH-Hh
Confidence 1111111111111 1222456677777788888888877777777777777777665555555544444444 44
Q ss_pred HHHHHHh
Q 009409 489 ALTGYLL 495 (535)
Q Consensus 489 ~i~G~l~ 495 (535)
.+.+++.
T Consensus 396 ~~~s~l~ 402 (406)
T KOG1479|consen 396 SLLSWVF 402 (406)
T ss_pred hHHHHHH
Confidence 4444443
No 266
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.94 E-value=6.4e-05 Score=74.72 Aligned_cols=110 Identities=21% Similarity=0.266 Sum_probs=87.9
Q ss_pred hhhHHHHHHHHHHHHHHHhh--hhhh------hHHHHHHHHhhhccCCchhhHHHHhhhccccc---chhhHHHHHHHhh
Q 009409 180 KVLQTGVLIWSLATALLPLL--AGFM------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLE---ERSRAVSFVFGGL 248 (535)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~--~~~~------~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~ 248 (535)
|+++++.+++.++.+++... .... ..++++.++.++|.|+.-|...++.+|.++++ +|...+.+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 46677778888888774322 2222 46888899999999999999999999999765 4677888899999
Q ss_pred hhHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhc
Q 009409 249 SFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (535)
Q Consensus 249 ~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 289 (535)
++|..+++.+.+++.++.||.+.|.+.++..++.++.++.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999988877666555443
No 267
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.94 E-value=7.6e-05 Score=54.75 Aligned_cols=61 Identities=20% Similarity=0.224 Sum_probs=54.5
Q ss_pred HHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Q 009409 341 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (535)
Q Consensus 341 ~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~ 402 (535)
+-..+++...+...+..++|.|+++ .|+|+.+.|.+.++..+..+++.++.|+++||.+++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 4456677777888899999999985 799999999999999999999999999999999875
No 268
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.80 E-value=0.00018 Score=71.80 Aligned_cols=182 Identities=12% Similarity=0.098 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHH-HhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHH
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSE-ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 414 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 414 (535)
|.++...+..++..........-.=.|+++ ..+-+.+..|++.+...++..+++++.|++..|.+.- +.-+
T Consensus 34 rsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~--------k~Pl 105 (488)
T KOG2325|consen 34 RSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV--------KKPL 105 (488)
T ss_pred HhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc--------ccCH
Confidence 344555556666555555444444456653 2577788899999999999999999999999987642 1122
Q ss_pred HHHHHHHHHHHHHh---hhcCC-CcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHH
Q 009409 415 TIAFLSPAVCMTLS---SIDLG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL 490 (535)
Q Consensus 415 ~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i 490 (535)
+.+.+++.++-+++ ....+ ..++++++-++.|++.+.. ...-.+++....+++|.++++..+...-+|.++||.+
T Consensus 106 i~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~ 184 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTI 184 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHH
Confidence 23333333332222 22233 4455566667777775543 3444556665667788888888777677777777765
Q ss_pred HHHHh----c--------ccCcchHHHHHHHHHHHHHHHhhhhhccCC
Q 009409 491 TGYLL----D--------STHSWSMSLFAPSIFFYLTGTIVWLAFASS 526 (535)
Q Consensus 491 ~G~l~----~--------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (535)
...+. + .++.|+.+-++++.+.++..++++..+++.
T Consensus 185 q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 185 QLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred HHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 43222 1 123467777777777777777777766543
No 269
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.74 E-value=0.00019 Score=65.81 Aligned_cols=324 Identities=15% Similarity=0.106 Sum_probs=154.5
Q ss_pred hHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhc
Q 009409 152 GLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 231 (535)
Q Consensus 152 ~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~ 231 (535)
|.+.-+-.+...+..+.+....||+.-..-..+..++-+.+.++. .++++.++-+.+-.+..++.|.......++.+.
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lV-afs~s~~~sL~GV~~aSissGlGEiTFL~lss~- 142 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLV-AFSNSVPMSLLGVVFASISSGLGEITFLALSSR- 142 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEE-EeccchhHHHhhhhhhhhcCCcceeehhhhhcc-
Confidence 444444555666667777778888644333333444545555555 467777888888888888887776665555433
Q ss_pred ccccchhhHHHHHHHhhhhHHHHHhhhHHHhcc--ccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhh
Q 009409 232 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE--NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINM 309 (535)
Q Consensus 232 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (535)
++ ....+.+..+.+.++.+|..--.++.+ .++-|.+.++...+.++....++++.+.++.......+...+...
T Consensus 143 Y~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~~~~ 218 (409)
T KOG3880|consen 143 YP----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTEIIP 218 (409)
T ss_pred CC----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccceecc
Confidence 33 245566777777777777776666666 356788888887776655555444433333222111111111110
Q ss_pred hhhhhhhHHHhc-cCCCCCcHHH-hhhcHHHHHHHHHHHHHhhhhHHHHH-hhHHHHHH-HhCCChhh---HHHHHhhHH
Q 009409 310 KKSLSASLEEMG-ESLKDVPWKA-IFRSKAVWAMIYAHFCGSWGHYTCLS-WLPTYFSE-ELSLNLTE---AAWVSILPP 382 (535)
Q Consensus 310 ~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~-~~p~~l~~-~~g~s~~~---~g~~~~~~~ 382 (535)
++....+..+.+ ........++ +.+-+.++..++-.+..++..|.++. ..++.+-+ ..|++... .-++-....
T Consensus 219 ~~~~~~~a~e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvlYQ 298 (409)
T KOG3880|consen 219 SQYLPFEAAEEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVLYQ 298 (409)
T ss_pred CCCCcccccccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhheeee
Confidence 100000000101 0011112222 22223333455555555555555443 22222210 12333222 223334443
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHH-HHHHHHHHHHhhhhhhhhhhhh
Q 009409 383 LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEI-VGILTAGLALSSFALSGLYCTH 461 (535)
Q Consensus 383 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~ 461 (535)
++-.+.+--. +-.... ..+.+...-++-....++-.........+++ +..+.=|+..+..+.....-+.
T Consensus 299 lGVFiSRSS~---------~~~~~p-~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~ 368 (409)
T KOG3880|consen 299 LGVFISRSSI---------NLFTMP-YLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIH 368 (409)
T ss_pred eeEEEEeccc---------eEEech-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHh
Confidence 3332221111 000000 0111111111111111111111122233333 3334445555555556666677
Q ss_pred hccCCcchhHHHHHHHHhhhhhhhHHHHHH
Q 009409 462 QDISPEYASILLGITNTVGAVPGIVGVALT 491 (535)
Q Consensus 462 ~~~~~~~~g~~~g~~~~~~~lg~~igp~i~ 491 (535)
++.+|++|-.+++.......+|..++..++
T Consensus 369 ~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 369 KETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred hcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 779999999999998887777666655544
No 270
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.71 E-value=0.00085 Score=65.69 Aligned_cols=113 Identities=17% Similarity=0.085 Sum_probs=79.5
Q ss_pred CccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHH--HHHHHHHHHh--hhhhhhHHHHHHHHhhhccCCchh
Q 009409 147 NSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLI--WSLATALLPL--LAGFMPGLVLSRVLVGIGEGVSPS 222 (535)
Q Consensus 147 s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~--~~~~~~~~~~--~~~~~~~l~~~~~~~G~~~~~~~~ 222 (535)
...+..+...+|.+|-.+++--...+ |+ |++.+.+.+- ..+..++.+. +.++.+.+++..+..|+.+|..+.
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 35667777777777766654432222 33 4444444332 2222212111 235667888899999999999999
Q ss_pred hHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhc
Q 009409 223 AATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII 263 (535)
Q Consensus 223 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 263 (535)
.....+.+-.++++|..++|....+-++|..++.+++-.+-
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998876553
No 271
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.70 E-value=0.00093 Score=67.46 Aligned_cols=133 Identities=14% Similarity=0.150 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 009409 382 PLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTH 461 (535)
Q Consensus 382 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 461 (535)
++..++.....|.++||+|+| ...........+......+. .+|.++ ..-...+.+........+.+
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk---------~~L~~~~~~~~l~~~~~~~~---~~~~~~-~~~l~g~~~~~~s~~~a~va 138 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRK---------VVLLLPLFGTILPALCLLFQ---GYWFFL-LLGLSGGFSAIFSVGFAYVA 138 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhh---------hhHHHHHHHHHHhHHHHHHH---HHHHhh-hcccccchhhhhhhhhhhee
Confidence 677788889999999999976 22222222222211111111 133332 22222233344455566677
Q ss_pred hccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhhccCCCC
Q 009409 462 QDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKP 528 (535)
Q Consensus 462 ~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (535)
+....+.|....|+.+.....+..++|.+++.+.+.. ++...|.+.++..++..+....+.++...
T Consensus 139 dis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 139 DISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred eccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhccccccC
Confidence 7788899999999999999999999999999999987 58888888888777777666666665443
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.68 E-value=0.0014 Score=66.42 Aligned_cols=160 Identities=18% Similarity=0.174 Sum_probs=97.7
Q ss_pred hHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCC---Cc
Q 009409 359 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG---LP 435 (535)
Q Consensus 359 ~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 435 (535)
...|+++.+|+++.+...+.....+.- ...++.|.++|-+--.+.+ ||..+.++.++..+.......... +.
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~r----r~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYR----RKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCc----chHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 344677889999999887766665543 4578899999998533332 444445555544333332222122 22
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhc--cCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHH
Q 009409 436 HWEIVGILTAGLALSSFALSGLYCTHQD--ISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFY 513 (535)
Q Consensus 436 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~ 513 (535)
....+.+++..++........-....+. -.|+.+|...+.......+|++++..+.|.+.+.. ++...|.+.+++..
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQGVFLISAALPL 165 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeEEehHHHHHHH
Confidence 2333333444444443333333333332 23444899999999999999999999999999987 47777777666555
Q ss_pred HHHHhhhhhcc
Q 009409 514 LTGTIVWLAFA 524 (535)
Q Consensus 514 ~~~~~~~~~~~ 524 (535)
+..+..+....
T Consensus 166 l~~~~~~~~~~ 176 (433)
T PF03092_consen 166 LMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHhhh
Confidence 55444444444
No 273
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.62 E-value=0.0015 Score=63.70 Aligned_cols=128 Identities=16% Similarity=0.072 Sum_probs=81.3
Q ss_pred HHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcC-----CC
Q 009409 360 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL-----GL 434 (535)
Q Consensus 360 p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 434 (535)
..|.+..|| +...+-+...++.+..++..+.+.|+.||+|-| ....++...-++...+-.... +.
T Consensus 68 ~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR---------~a~llgt~ln~iGa~Ir~iss~p~v~~~ 137 (480)
T KOG2563|consen 68 NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR---------TALLLGTVLNGIGAWIRLISSLPFVPPL 137 (480)
T ss_pred HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchH---------HHHHHHHHHHHHHHHHhhhccCcccccc
Confidence 335666677 667777888899999999999999999999854 333333333333333222211 11
Q ss_pred cH--HHHHHHHHHHHHHhhhhhhhhhhhh-hccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhccc
Q 009409 435 PH--WEIVGILTAGLALSSFALSGLYCTH-QDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 498 (535)
Q Consensus 435 ~~--~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~ 498 (535)
.+ ....+..+.+.+... ......-++ .-+++++|+++..+..+...+|.++|.++...+..+.
T Consensus 138 f~~~l~~~Gq~iaa~Aq~F-im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 138 FRRPLTHTGQSIAAAAQPF-ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred chhhhhHHhHHHHHHhhhH-hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 12 233444444433322 222222233 3389999999999999999999999988888777654
No 274
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.53 E-value=0.005 Score=55.86 Aligned_cols=98 Identities=17% Similarity=0.187 Sum_probs=53.2
Q ss_pred cchhhHHHHHHHhhhhHHHHHhhhHHHh---c--cccchhHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcchhhhhh
Q 009409 235 EERSRAVSFVFGGLSFGSVAGLLLAPPI---I--ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINM 309 (535)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l---~--~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (535)
++|+....+...+.++|.++.....-.- . -.-.|++++-+.+++.++-++.+..+-.+-+..... +++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~--~k~~k--- 76 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK--EKQEK--- 76 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc--ccccc---
Confidence 4556666666667777777664432111 1 123599999999988877666666653321111111 00000
Q ss_pred hhhhhhhHHHhccCCCCCcHHHhhhcHHHHHHHHHHH
Q 009409 310 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (535)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (535)
+..+..++...++.+|++..|...+.+.
T Consensus 77 ---------~~~~~~~~~s~~~~LK~K~tw~w~~~Yg 104 (267)
T PF07672_consen 77 ---------ENSTLSKKPSYKSILKEKETWKWILIYG 104 (267)
T ss_pred ---------ccccccccchHHHHHccchHHHHHHHHH
Confidence 0001112345688999999887665544
No 275
>PRK03612 spermidine synthase; Provisional
Probab=97.27 E-value=0.029 Score=57.97 Aligned_cols=156 Identities=17% Similarity=0.025 Sum_probs=82.0
Q ss_pred HHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHH
Q 009409 344 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV 423 (535)
Q Consensus 344 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (535)
..++..++....-....-.+.-.+|-+....+.+.+.+.++..+|+.+++++.++..++ ....-..++.+....
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~------~~~~e~~i~l~~~~~ 95 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG------FVAVELLLALLGGLS 95 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH------HHHHHHHHHHHHHHH
Confidence 34444444455555555556556788888889888988888889888888776432211 011111111111111
Q ss_pred HHHHhhh-cC-CCc-HHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhc-ccC
Q 009409 424 CMTLSSI-DL-GLP-HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD-STH 499 (535)
Q Consensus 424 ~~~~~~~-~~-~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~-~~g 499 (535)
..++... .. ... ...+...+..++..+...|.... +......++.+...|-......+|+++|+++.|++.- ..|
T Consensus 96 ~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~-~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG 174 (521)
T PRK03612 96 ALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMR-ILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLG 174 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcc
Confidence 1111111 00 000 11112223334444443333322 2222233346778888999999999999999997775 565
Q ss_pred cchHHHH
Q 009409 500 SWSMSLF 506 (535)
Q Consensus 500 ~~~~~~~ 506 (535)
.....+.
T Consensus 175 ~~~t~~~ 181 (521)
T PRK03612 175 LIRTAAL 181 (521)
T ss_pred hHHHHHH
Confidence 4444333
No 276
>PRK03612 spermidine synthase; Provisional
Probab=97.14 E-value=0.01 Score=61.22 Aligned_cols=156 Identities=16% Similarity=0.135 Sum_probs=90.6
Q ss_pred HHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHH-HHHHHH-HHHHHHHh
Q 009409 122 AFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT-GVLIWS-LATALLPL 198 (535)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~-~~~~~~-~~~~~~~~ 198 (535)
..|++++....+-..... +..-+|-+..+.+.+.+++.++..+|..+++++.++.-++...+- +..+.+ ++..+...
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~ 101 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYA 101 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444333 444578889999999999999999999998887643222221111 111111 11111111
Q ss_pred hh----hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhcc-ccchhHHHH
Q 009409 199 LA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWESVFY 273 (535)
Q Consensus 199 ~~----~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw~~~f~ 273 (535)
.. .....++...++.++..|...|....+..+... ++-+...|..+....+|+++|.++.+++.- .+|-....+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~ 180 (521)
T PRK03612 102 AFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAA 180 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 11 111122344456677777777776666554322 345778889999999999999999887653 566544444
Q ss_pred HHHHH
Q 009409 274 IFGLL 278 (535)
Q Consensus 274 ~~~~~ 278 (535)
+.+.+
T Consensus 181 ~~a~l 185 (521)
T PRK03612 181 LTGSL 185 (521)
T ss_pred HHHHH
Confidence 44443
No 277
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.13 E-value=0.078 Score=49.78 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=52.8
Q ss_pred HHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcc
Q 009409 159 FWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI 232 (535)
Q Consensus 159 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~ 232 (535)
++..+...++.+.+..++|-|+++.++...+...... -.-+.+..++-.....|++.+..+...-+++++.-
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~--Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA--NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh--hcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 3344455566668999999999999987776543322 23344678888899999999999988888877654
No 278
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.00 E-value=0.14 Score=51.23 Aligned_cols=184 Identities=10% Similarity=0.156 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHH
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 415 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 415 (535)
+..+.+.+..++..++.-...+..|.++.+.+.-+..-.+.+-..-.+..++.+...|.+.||..|.+.-. .-....-
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~--~~l~~Qn 79 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIR--TSLVVQN 79 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHH--HHHHHHH
Confidence 34567778888999998899999999999887767666666666677777888888899999876543211 1111222
Q ss_pred HHHHHHHHHHHHhhhcCCC---cHHHHHHHHHHHHHHhhhh---hhhhhh------hhh--ccCCcchhHHHHHHHHhhh
Q 009409 416 IAFLSPAVCMTLSSIDLGL---PHWEIVGILTAGLALSSFA---LSGLYC------THQ--DISPEYASILLGITNTVGA 481 (535)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~---~~~~~~------~~~--~~~~~~~g~~~g~~~~~~~ 481 (535)
....+.+..+......... ..+....++......+... ...... +.. .-+++.....++.+.-+-.
T Consensus 80 ~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL 159 (432)
T PF06963_consen 80 LSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDL 159 (432)
T ss_pred HHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHH
Confidence 2233333333322222211 0122222222211222111 111111 111 1245666777777777888
Q ss_pred hhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhhh
Q 009409 482 VPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA 522 (535)
Q Consensus 482 lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 522 (535)
+...++|.+.|.+.+..+ ......+.++.-++...+-++.
T Consensus 160 ~ckllaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 160 FCKLLAPLFVGLLMTFAS-PVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHHHHHHHHHHHHhhccC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999774 6555555555555555554443
No 279
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.90 E-value=0.084 Score=44.68 Aligned_cols=109 Identities=9% Similarity=-0.083 Sum_probs=77.0
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHHHHHHHHHhhhhhhh
Q 009409 377 VSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSG 456 (535)
Q Consensus 377 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 456 (535)
-.++.+....+..++.+.+.+++|.| +.+.++.+.-.+...... ..+.+..+.+..+.|++.+..+...
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K---------~sm~lg~~~y~~y~~~~~--~~~~~~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPK---------WSMILGSLGYAIYIASFF--YPNSYTLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhH---------HHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHhhhhHHhhHhh
Confidence 34555666777778888899999864 444444443333222222 2345566677778899988888888
Q ss_pred hhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhc
Q 009409 457 LYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD 496 (535)
Q Consensus 457 ~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 496 (535)
..++.+...++.+++..|+...+...+.++|..+.-.+..
T Consensus 111 g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 111 GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888888999999999999999888888877655544
No 280
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.76 E-value=0.00074 Score=60.41 Aligned_cols=154 Identities=11% Similarity=0.150 Sum_probs=82.7
Q ss_pred CcHHHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 009409 327 VPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (535)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 406 (535)
.+|..-+++-.++...+.+.+.-.....-..++|.|..+.+++.....+++-++.++.....+.+..-+- +++++
T Consensus 192 m~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eip--wngkr--- 266 (412)
T KOG4830|consen 192 MHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIP--WNGKR--- 266 (412)
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCC--cCcce---
Confidence 3455666777777888888888877777888999988887788777777777777776665544432111 01110
Q ss_pred hhHHHHHHHHHHHHHHHHHH-HhhhcCCCcHHHHHHHHHHHHHHhhhhhhhhhhhhhc--cCCcchhHHHHHHHHhhhhh
Q 009409 407 TMVRKICQTIAFLSPAVCMT-LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQD--ISPEYASILLGITNTVGAVP 483 (535)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~g~~~g~~~~~~~lg 483 (535)
.|.....+.++...+.. +.....+........-+++|++.+............. ...+..+...|.+++.--+.
T Consensus 267 ---lKayYsaGgiiwifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS 343 (412)
T KOG4830|consen 267 ---LKAYYSAGGIIWIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLS 343 (412)
T ss_pred ---eeeeeecccHHHHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhc
Confidence 11111222222222222 2222233333444444556666555444433333322 23345566667777666665
Q ss_pred hhHHH
Q 009409 484 GIVGV 488 (535)
Q Consensus 484 ~~igp 488 (535)
..++-
T Consensus 344 ~GiA~ 348 (412)
T KOG4830|consen 344 NGIAY 348 (412)
T ss_pred ccHHH
Confidence 55443
No 281
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.63 E-value=0.023 Score=57.26 Aligned_cols=108 Identities=17% Similarity=0.003 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHHhhhccchhhhcccCCc--hhhHHHHH--HHHHHHHHHHhhh---------hhhhHHHHHHHHhhhccC
Q 009409 152 GLVQSSFFWGYALSQLPGGWLAKIFGGR--KVLQTGVL--IWSLATALLPLLA---------GFMPGLVLSRVLVGIGEG 218 (535)
Q Consensus 152 ~~~~s~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~~--~~~~~~~~~~~~~---------~~~~~l~~~~~~~G~~~~ 218 (535)
-....++.++-.+|..+..+.. .-++| ++++.+.+ ++.-.. +++... ++-+..++..++.|+..|
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf-~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLF-LLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHH-HHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 4566788888888887654431 11222 33332221 221222 222111 233567778999999999
Q ss_pred CchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHH
Q 009409 219 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPP 261 (535)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 261 (535)
-.......+..+..+++||..+-.+...+..+|..+|..++-.
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888888888888877543
No 282
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.61 E-value=0.15 Score=48.34 Aligned_cols=150 Identities=16% Similarity=0.115 Sum_probs=88.7
Q ss_pred hhhHHHHHhhHHHHHHHhCCCh--hhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHH
Q 009409 350 WGHYTCLSWLPTYFSEELSLNL--TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL 427 (535)
Q Consensus 350 ~~~~~~~~~~p~~l~~~~g~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (535)
..........+.+..+ ++.+. ...++......+...++.++.|++.||.|+| +.. ............+
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-------~~~--~~~~~~~~~~~~~ 85 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR-------KVL--IIGLLLFLLGTLL 85 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch-------HHH--HHHHHHHHHHHHH
Confidence 3334444566666653 34444 4678888888888888889999999998654 111 2222111111111
Q ss_pred hhhcCC-CcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCC-cchhHHHHHHHH-hhhhhhhHHHHHHHHHhcc-cCcchH
Q 009409 428 SSIDLG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISP-EYASILLGITNT-VGAVPGIVGVALTGYLLDS-THSWSM 503 (535)
Q Consensus 428 ~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~-~~~lg~~igp~i~G~l~~~-~g~~~~ 503 (535)
...... .....++..+..|++.+...+.......+..++ +.++...+.... ...+|..++|.+++.+... ...|..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T COG0477 86 LALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRA 165 (338)
T ss_pred HHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 111111 233333444445666665666666666666665 578888888888 5788889999888877765 113555
Q ss_pred HHHHHH
Q 009409 504 SLFAPS 509 (535)
Q Consensus 504 ~~~~~~ 509 (535)
.+....
T Consensus 166 ~~~~~~ 171 (338)
T COG0477 166 AFLLAA 171 (338)
T ss_pred HHHHHH
Confidence 444433
No 283
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.30 E-value=0.038 Score=54.94 Aligned_cols=86 Identities=8% Similarity=0.060 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhccCCc---chhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHH
Q 009409 436 HWEIVGILTAGLALSSFALSGLYCTHQDISPE---YASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF 512 (535)
Q Consensus 436 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~ 512 (535)
...++++.+++++.+.+=+.......+.++++ ++.+.+..+....++|..+++.+.+++-+.. +|...|.+.++..
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~ 112 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGM 112 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhhhhhHHHHHH
Confidence 45677788889999988888888888877654 5777888899999999999999999999988 4999999888766
Q ss_pred HHHHHhhhhh
Q 009409 513 YLTGTIVWLA 522 (535)
Q Consensus 513 ~~~~~~~~~~ 522 (535)
+++.+..+.-
T Consensus 113 ~~~~~~f~~~ 122 (372)
T PF00854_consen 113 LLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHhC
Confidence 6555544443
No 284
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.27 E-value=0.065 Score=53.71 Aligned_cols=145 Identities=17% Similarity=0.186 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHhhhhhhHhhhhh-h--hcccCCCccch-hHHHHHHHHHHHhhhccchhhhc---ccCCchhhHHHHHHH
Q 009409 117 GTTSLAFVICNMDKVNLSVAIIP-M--SHRFGWNSSVA-GLVQSSFFWGYALSQLPGGWLAK---IFGGRKVLQTGVLIW 189 (535)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~g~s~~~~-~~~~s~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~ 189 (535)
+++...++..++..+.+....|. + ....+.+.... ++..-...++..++.++.+.+.+ ++|+++++.++..+.
T Consensus 243 l~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~ 322 (461)
T KOG3098|consen 243 LLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIH 322 (461)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHH
Confidence 34445555566666666666665 2 22333332222 22222333444455566666665 488999999988887
Q ss_pred HHHHHHHHhhhh-----------------hhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHH
Q 009409 190 SLATALLPLLAG-----------------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS 252 (535)
Q Consensus 190 ~~~~~~~~~~~~-----------------~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 252 (535)
.++.++.....+ ++...+++-++.|++.+........++.+.+| ++|..+.++...-..++.
T Consensus 323 ~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s 401 (461)
T KOG3098|consen 323 LIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVAS 401 (461)
T ss_pred HHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHH
Confidence 777665532211 24467888899999999999999999999994 888999999888888887
Q ss_pred HHHhhhHHHh
Q 009409 253 VAGLLLAPPI 262 (535)
Q Consensus 253 ~~g~~~~~~l 262 (535)
.++-......
T Consensus 402 ~v~~f~~~~~ 411 (461)
T KOG3098|consen 402 CVAFFFSPYL 411 (461)
T ss_pred HHHhhhhhhh
Confidence 7766555433
No 285
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.22 E-value=0.015 Score=61.01 Aligned_cols=164 Identities=10% Similarity=0.163 Sum_probs=112.4
Q ss_pred HHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhc--
Q 009409 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID-- 431 (535)
Q Consensus 354 ~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 431 (535)
+.....-+-++++++++..+.|++....-++..+......+...|..+.++ +..+.+++++..++..+.
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~---------Ig~G~~~m~lgsll~alPHf 184 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRW---------IGIGLVLMGLGSLLFALPHF 184 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccce---------eeechhHHHHHHHHHhChHH
Confidence 444444455677899999999999999999999888888888777543221 122222222221111110
Q ss_pred ------------------C---------------------------C-C-cH--HHHHHHHHHHHHHhhhhhhhhhhhhh
Q 009409 432 ------------------L---------------------------G-L-PH--WEIVGILTAGLALSSFALSGLYCTHQ 462 (535)
Q Consensus 432 ------------------~---------------------------~-~-~~--~~~~~~~~~g~~~~~~~~~~~~~~~~ 462 (535)
. . + .. +++++.++.|++...+.+....++-+
T Consensus 185 ~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDD 264 (735)
T KOG3626|consen 185 FSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDD 264 (735)
T ss_pred hcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccc
Confidence 0 0 0 02 33445677888888888888888988
Q ss_pred ccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhccc------------------CcchHHHHHHHHHHHHHHHhhhhhcc
Q 009409 463 DISPEYASILLGITNTVGAVPGIVGVALTGYLLDST------------------HSWSMSLFAPSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 463 ~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~------------------g~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (535)
.+.+++.....|+++++.-+|-++|-++++.+...+ |-|...|++.+.+.++.++.++++.+
T Consensus 265 nvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk 344 (735)
T KOG3626|consen 265 NVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPK 344 (735)
T ss_pred cccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 899999999999999999999999988888776532 34677788888877777776666654
Q ss_pred CC
Q 009409 525 SS 526 (535)
Q Consensus 525 ~~ 526 (535)
+.
T Consensus 345 ~l 346 (735)
T KOG3626|consen 345 EL 346 (735)
T ss_pred cC
Confidence 43
No 286
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.15 E-value=0.41 Score=48.63 Aligned_cols=37 Identities=14% Similarity=0.021 Sum_probs=32.8
Q ss_pred hhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009409 459 CTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 495 (535)
Q Consensus 459 ~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 495 (535)
.+.+...+++..+-.++....+++|..+++.+..++.
T Consensus 153 fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 153 FANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556678899999999999999999999999998887
No 287
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.03 E-value=0.001 Score=68.92 Aligned_cols=166 Identities=14% Similarity=0.196 Sum_probs=2.3
Q ss_pred hhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhh
Q 009409 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI 430 (535)
Q Consensus 351 ~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (535)
...++..-.-+-++++++++..++|++.+..-++.++..++..++.+|..+. ++ +..+.++.++..++..+
T Consensus 17 ~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp--------rw-ig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 17 MVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRP--------RW-IGIGALLMGLGSLLFAL 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc--------ce-eeecHHHHHHHHHHHhc
Confidence 3344444444456678999999999999999999999999999988875432 12 22233333332222211
Q ss_pred cC---C----------------------------------------------CcHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 009409 431 DL---G----------------------------------------------LPHWEIVGILTAGLALSSFALSGLYCTH 461 (535)
Q Consensus 431 ~~---~----------------------------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 461 (535)
+. + ...+.+++.++.|++....++...+++-
T Consensus 88 Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiD 167 (539)
T PF03137_consen 88 PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYID 167 (539)
T ss_dssp ----------------------------------------------------------------SSS-------------
T ss_pred cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeec
Confidence 00 0 0112334556677777777888888898
Q ss_pred hccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcc---------------------cCcchHHHHHHHHHHHHHHHhhh
Q 009409 462 QDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS---------------------THSWSMSLFAPSIFFYLTGTIVW 520 (535)
Q Consensus 462 ~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~---------------------~g~~~~~~~~~~~~~~~~~~~~~ 520 (535)
+++++++.+...|++.++..+|-++|-.++|..... .|-|...|++.+++.++.++.++
T Consensus 168 Dnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~ 247 (539)
T PF03137_consen 168 DNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLF 247 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888888877642 13477777777777777666666
Q ss_pred hhccC
Q 009409 521 LAFAS 525 (535)
Q Consensus 521 ~~~~~ 525 (535)
.+.|+
T Consensus 248 ~FPk~ 252 (539)
T PF03137_consen 248 FFPKK 252 (539)
T ss_dssp -----
T ss_pred cCCcc
Confidence 65543
No 288
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.91 E-value=0.59 Score=46.23 Aligned_cols=156 Identities=12% Similarity=-0.046 Sum_probs=96.7
Q ss_pred HHHhhHHHHHHH-hCCChhhHHHHHhhHHH-HHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcC
Q 009409 355 CLSWLPTYFSEE-LSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL 432 (535)
Q Consensus 355 ~~~~~p~~l~~~-~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (535)
...++..|+.+. .|++..+...-..+.+. ..++.-+....+.|.++-| ..+++..+...+...++.+ .
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk---------pviil~~~~~i~t~~lll~-~ 91 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK---------PVIILQALSYIITWLLLLF-G 91 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHHHHH-H
Confidence 346777888776 79988887543333322 3344555677889988654 3333333333333333332 2
Q ss_pred CCcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHhccc-CcchHHHHHHHHH
Q 009409 433 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST-HSWSMSLFAPSIF 511 (535)
Q Consensus 433 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~-g~~~~~~~~~~~~ 511 (535)
.+...+-+.-++.|.+.+. -.....++...+++++.-++.+.......+|..++..++-.+.... .+|....++..+.
T Consensus 92 ~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~ 170 (412)
T PF01770_consen 92 TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLAS 170 (412)
T ss_pred CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 4445555666777777664 4555566777789999999999999999999898888887777632 3566665555444
Q ss_pred HHHHHHhhhh
Q 009409 512 FYLTGTIVWL 521 (535)
Q Consensus 512 ~~~~~~~~~~ 521 (535)
..++.++.++
T Consensus 171 ~~~a~~~~~f 180 (412)
T PF01770_consen 171 VSLALLIALF 180 (412)
T ss_pred HHHHHHHHHH
Confidence 4444444333
No 289
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.70 E-value=0.11 Score=38.57 Aligned_cols=51 Identities=18% Similarity=0.326 Sum_probs=42.9
Q ss_pred hhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 009409 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (535)
Q Consensus 349 ~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~ 400 (535)
..+-+.+...+|...+ +.++|..+.|++.+..+++..+|.+...++.++..
T Consensus 5 GigRFayTplLP~M~~-~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~ 55 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQA-DGGLSLSQAGWLASANYLGYLVGALLASRLPRHSR 55 (85)
T ss_pred hhHHHHHHhHhHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3455677788998775 56999999999999999999999999998887643
No 290
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.17 E-value=0.073 Score=52.45 Aligned_cols=153 Identities=16% Similarity=0.118 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHH
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 415 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 415 (535)
+.........+...+++..=..++|.|+++ .|.+....+.++....+.+.+.+++.|..+||...|.-+ ||..+.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GR----RRPfI~ 106 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGR----RRPFIL 106 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceeccccccccccccccccc----ccchHH
Confidence 344444555555666666667899999974 699999999999999999999999999999986544222 223333
Q ss_pred HHHHHHHHHHHHhhhcC-------CC--c--HHHHHHHHHHH-----HHHhhhhhhhhhhhhhccCCcchhH-HHHHHHH
Q 009409 416 IAFLSPAVCMTLSSIDL-------GL--P--HWEIVGILTAG-----LALSSFALSGLYCTHQDISPEYASI-LLGITNT 478 (535)
Q Consensus 416 ~~~~~~~~~~~~~~~~~-------~~--~--~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~ 478 (535)
.+....++.+.+..... ++ . ....+..+++| ++......+.-....+...++++.+ +++.+..
T Consensus 107 ~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~ 186 (498)
T KOG0637|consen 107 AGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSF 186 (498)
T ss_pred HhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHH
Confidence 33333333333322211 11 1 11122222333 3333344455556666666666555 8888888
Q ss_pred hhhhhhhHHHHHHHH
Q 009409 479 VGAVPGIVGVALTGY 493 (535)
Q Consensus 479 ~~~lg~~igp~i~G~ 493 (535)
...+|+.+|=.++++
T Consensus 187 f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 187 FMAVGNVLGYALGSY 201 (498)
T ss_pred HHHhcceeeeecccc
Confidence 888888887666553
No 291
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.88 E-value=0.019 Score=55.22 Aligned_cols=107 Identities=22% Similarity=0.198 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHhhhccchhhhcc-cCCchhhHHHHH--HHHHHHHHHHh----------hhhhhhHHHHHHHHhhhccCC
Q 009409 153 LVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVL--IWSLATALLPL----------LAGFMPGLVLSRVLVGIGEGV 219 (535)
Q Consensus 153 ~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~--~~~~~~~~~~~----------~~~~~~~l~~~~~~~G~~~~~ 219 (535)
....+|.++-.+|..+.++.--+ -.+|++...+.. ++ +..++++. .-++-+..++..++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~f-iPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLF-IPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHH-HHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 35667888888888887764211 134444433221 11 22222221 112335677788999999999
Q ss_pred chhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHH
Q 009409 220 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (535)
Q Consensus 220 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 260 (535)
.......+..+..++++|..+-.+......+|-.+|..++-
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp --HHHH-----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888888888888888777653
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.64 E-value=0.021 Score=54.95 Aligned_cols=58 Identities=16% Similarity=0.227 Sum_probs=3.1
Q ss_pred CcHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHH
Q 009409 434 LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT 491 (535)
Q Consensus 434 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~ 491 (535)
+.++.++.++++|+..|........+..+.++++++..+..+++..-.+|-.+|..+.
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --------------------HHHH----------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566677888888877777777777888888888887777777777777766543
No 293
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.60 E-value=0.95 Score=43.80 Aligned_cols=145 Identities=11% Similarity=-0.006 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHH-----HHHHcCCCchhHH
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFAD-----NLIATGVETTMVR 410 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-----r~~~~~~~~~~~~ 410 (535)
+++..++..+.+....+.... .+|..++ .-|.|-++.+......+= .--.++...++| |+|+||.
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~-ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~Grrks------ 100 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQ-AKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKS------ 100 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhc-CCCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccc------
Confidence 566677777777777755545 9999997 447777766654333221 122455667777 8888743
Q ss_pred HHHHHHHHHHHHHHHHHhhhcC------C-CcHHHH--HHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhh
Q 009409 411 KICQTIAFLSPAVCMTLSSIDL------G-LPHWEI--VGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGA 481 (535)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 481 (535)
++.-.-+++...+..+..... + .+...+ ..++++-+..+..-....-+......+++.|-+........+
T Consensus 101 -Wvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~ 179 (510)
T KOG3574|consen 101 -WVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQT 179 (510)
T ss_pred -eeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHh
Confidence 333333333333333322111 1 111111 122333333344444445556666788887777766666666
Q ss_pred hhhhHHHHHH
Q 009409 482 VPGIVGVALT 491 (535)
Q Consensus 482 lg~~igp~i~ 491 (535)
.|.+++..+.
T Consensus 180 ~GyfL~~~if 189 (510)
T KOG3574|consen 180 AGYFLGNVVF 189 (510)
T ss_pred hhHHhhccee
Confidence 6666665544
No 294
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.75 E-value=0.27 Score=44.88 Aligned_cols=153 Identities=12% Similarity=0.098 Sum_probs=78.7
Q ss_pred HHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHH
Q 009409 362 YFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVG 441 (535)
Q Consensus 362 ~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (535)
|+-+.||+...++|.++........+.+.+.|-++||.|+|+.- ....+..+..++. -..+....+.++
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKrac------vtycitYiLsCiT-----KhSpqYkVLmVG 130 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC------VTYCITYILSCIT-----KHSPQYKVLMVG 130 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccce------eeehHHHHHHHHh-----hcCCceEEEeeh
Confidence 44567899999999887777677778888899999999987421 1111222211111 111222334555
Q ss_pred HHHHHHHHhhhhhhhhhhhh-hcc-----CCcchhHHHHHHH-HhhhhhhhHHHHHHHHHhcccC-cchHHHHHHHHHHH
Q 009409 442 ILTAGLALSSFALSGLYCTH-QDI-----SPEYASILLGITN-TVGAVPGIVGVALTGYLLDSTH-SWSMSLFAPSIFFY 513 (535)
Q Consensus 442 ~~~~g~~~~~~~~~~~~~~~-~~~-----~~~~~g~~~g~~~-~~~~lg~~igp~i~G~l~~~~g-~~~~~~~~~~~~~~ 513 (535)
-.+.|+.........-.+.. ++. +.+-.....+-.. ....+-+++....+-.+.|.++ +.-.+|-..++++.
T Consensus 131 R~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLa 210 (454)
T KOG4332|consen 131 RVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLA 210 (454)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHH
Confidence 66666665554444433332 222 2222222233222 2234445556666666777653 13345555444444
Q ss_pred HHHHhhhhhccC
Q 009409 514 LTGTIVWLAFAS 525 (535)
Q Consensus 514 ~~~~~~~~~~~~ 525 (535)
++..+.+--+.+
T Consensus 211 igmAvil~~W~E 222 (454)
T KOG4332|consen 211 IGMAVILSSWSE 222 (454)
T ss_pred HHHHHHHhhhhh
Confidence 444444433333
No 295
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=92.57 E-value=3.8 Score=42.94 Aligned_cols=173 Identities=14% Similarity=0.075 Sum_probs=102.5
Q ss_pred HHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 009409 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (535)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 419 (535)
..+..-.+...+++++..-+-.|+.+.++.+...+.-..............++++++|-+-.| -..+.++.+
T Consensus 41 ~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gr--------y~tI~~~s~ 112 (571)
T KOG1237|consen 41 FILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGR--------YFTINIGSL 112 (571)
T ss_pred HHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHH--------HHHHHHHHH
Confidence 344445556666677777788888888898887777666666666777778889999988654 222222222
Q ss_pred HHHHHHHHh-----hh--cC------------CCcH-----HHHHHHHHHHHHHhhhhhhhhhhhhhccC---C-cc--h
Q 009409 420 SPAVCMTLS-----SI--DL------------GLPH-----WEIVGILTAGLALSSFALSGLYCTHQDIS---P-EY--A 469 (535)
Q Consensus 420 ~~~~~~~~~-----~~--~~------------~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~-~~--~ 469 (535)
+..+++.+. .. .. ..+. .+..++.+..++.++.-+.....-++.++ + +. .
T Consensus 113 i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~ 192 (571)
T KOG1237|consen 113 ISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGI 192 (571)
T ss_pred HHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCc
Confidence 222211110 00 00 0001 12223333444455555555555555555 2 22 3
Q ss_pred hHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhhhh
Q 009409 470 SILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL 521 (535)
Q Consensus 470 g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 521 (535)
..-+.......++|..++-.+.-++-+.. +|...|.+..++.+++.++.+.
T Consensus 193 ~~fFnW~yf~~~~g~l~a~t~~vyiq~~~-~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 193 PSFFNWFYFSQNGGALLAQTVLVYIQDNV-GWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhhcc-cceeeccHHHHHHHHHHHHHHc
Confidence 36777788888899998888888887765 5888888877765555444443
No 296
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=92.44 E-value=0.5 Score=45.42 Aligned_cols=165 Identities=12% Similarity=-0.002 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHhhhhhhHhhhhhhhcccCC-CccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHH------H
Q 009409 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGW-NSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLI------W 189 (535)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~------~ 189 (535)
+.+.+++++...+.-++......++.+++- |..........-.....+..++.|-..|+..|+|++...+.+ .
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence 356677888887777788777777777663 233333333333444556677888889999999988766542 2
Q ss_pred HHHHHHHHhhhh-----hhhHHHHHHHHhhhccCCc--hhhHHH--Hhhhcc----cccchhhH---HHHHHHhhhhHHH
Q 009409 190 SLATALLPLLAG-----FMPGLVLSRVLVGIGEGVS--PSAATD--LIARSI----PLEERSRA---VSFVFGGLSFGSV 253 (535)
Q Consensus 190 ~~~~~~~~~~~~-----~~~~l~~~~~~~G~~~~~~--~~~~~~--~~~~~~----~~~~r~~~---~~~~~~~~~~g~~ 253 (535)
+.+.++..+..+ +++.+..+..+.-...+.. ...+.+ +--||. ..+.+... .+.....-.....
T Consensus 110 agglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~ 189 (503)
T KOG2601|consen 110 AGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNL 189 (503)
T ss_pred HHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhc
Confidence 222223323333 3344444433332221111 111111 112333 22333333 3666667777889
Q ss_pred HHhhhHHHhccccchhHHHHHHHHHHHH
Q 009409 254 AGLLLAPPIIENLGWESVFYIFGLLGIA 281 (535)
Q Consensus 254 ~g~~~~~~l~~~~gw~~~f~~~~~~~~~ 281 (535)
+.|++.|.+.+..+-|..-.+.++..++
T Consensus 190 Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 190 LAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhcccceeechhhhhhhhHHHHHH
Confidence 9999999999888888766665555444
No 297
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=90.66 E-value=14 Score=36.53 Aligned_cols=65 Identities=6% Similarity=-0.096 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~ 402 (535)
-.++...+........+..+.+..+.|-...-+.+. +-.......+.+.+...+...+.-+...|
T Consensus 18 ~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~ 82 (406)
T KOG1479|consen 18 LVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTR 82 (406)
T ss_pred cHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555566666777777777776655444444 33344444555555555555555555443
No 298
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=89.47 E-value=4.5 Score=37.20 Aligned_cols=107 Identities=13% Similarity=0.119 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHhhhccchhhhcc-cCCchhhHH----HHHHHHHHHHHHHhhh-h---hhhHHHHHHHHhhhccCCchh
Q 009409 152 GLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQT----GVLIWSLATALLPLLA-G---FMPGLVLSRVLVGIGEGVSPS 222 (535)
Q Consensus 152 ~~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~----~~~~~~~~~~~~~~~~-~---~~~~l~~~~~~~G~~~~~~~~ 222 (535)
....-++..+..+|....|+.... +.||+.+.. +.+++.+..++..... + ....+++.-|+.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344456666777888888888875 455554442 2333333332221111 1 245577777888877644444
Q ss_pred hHHHHhhhc--ccccchhhHHHHHHHhhhhHHHHHhhh
Q 009409 223 AATDLIARS--IPLEERSRAVSFVFGGLSFGSVAGLLL 258 (535)
Q Consensus 223 ~~~~~~~~~--~~~~~r~~~~~~~~~~~~~g~~~g~~~ 258 (535)
+...+-.|. .+|++-|...|+....+.+...+.-++
T Consensus 224 ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii 261 (267)
T PF07672_consen 224 VILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDII 261 (267)
T ss_pred HHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHH
Confidence 433322222 234445555555444444444443333
No 299
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=89.31 E-value=0.86 Score=45.82 Aligned_cols=67 Identities=10% Similarity=-0.007 Sum_probs=50.6
Q ss_pred hHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhH
Q 009409 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (535)
Q Consensus 204 ~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 270 (535)
..+++.-++..+.....+.+..+.-+.+.+|.-=|+.|.+.+...++|+---..+.-++.+.+.++.
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~~ 472 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVAT 472 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhccccc
Confidence 3455556666677677778888888888999999999999999999988766666666666655553
No 300
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=88.40 E-value=2.3 Score=39.98 Aligned_cols=135 Identities=19% Similarity=0.132 Sum_probs=82.5
Q ss_pred HHHHHhhhhhhHhhhhh-h----hcccCCC-ccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHH-----HHHHHH
Q 009409 123 FVICNMDKVNLSVAIIP-M----SHRFGWN-SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTG-----VLIWSL 191 (535)
Q Consensus 123 ~~~~~~~~~~~~~~~~~-~----~~~~g~s-~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~-----~~~~~~ 191 (535)
.+..++..+.++..+.. + .+.+..+ ..|.-|....|.+|-.+.. .-..-+--+.+...+ .+++.+
T Consensus 256 L~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvlYQlGVFiSR----SS~~~~~~p~l~~LailQ~vNl~ff~ 331 (409)
T KOG3880|consen 256 LALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVLYQLGVFISR----SSINLFTMPYLWLLAILQFVNLLFFL 331 (409)
T ss_pred HHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhheeeeeeEEEEe----ccceEEechHHHHHHHHHHHHHHHHH
Confidence 34444444444443222 1 2334444 3457777777776533221 111112222222222 223333
Q ss_pred HHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHh
Q 009409 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (535)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (535)
..... .+.++++..++..+.-|+-+|..+....--+.+-.++++|-.+|+....+-++|..++.+++-.+
T Consensus 332 ~~a~~-~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 332 LQAWY-WFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHH-HhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 33333 35677788888899999999988888888888878889999999999999999988887776444
No 301
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=84.12 E-value=61 Score=34.27 Aligned_cols=34 Identities=21% Similarity=0.183 Sum_probs=21.7
Q ss_pred CCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 009409 368 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 401 (535)
Q Consensus 368 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~ 401 (535)
.-++...++++..++++..+--++.+....|+.+
T Consensus 321 tg~~~~g~~~l~~~gLG~~~Plll~~~~~~~~lp 354 (571)
T PRK00293 321 SGDLLLGGLTLYLLALGMGLPLILITTFGNKLLP 354 (571)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3455666677777888776666666666655543
No 302
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=83.27 E-value=26 Score=34.23 Aligned_cols=68 Identities=13% Similarity=0.149 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC
Q 009409 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (535)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (535)
+....+..++++..++--...+-...|+.+-.|-+....+..-..-+....+...+.|...|+..+.|
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~K 94 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVK 94 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHH
Confidence 33445566777777777777777788887655545544444444455556666777788888887654
No 303
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=82.52 E-value=8.2 Score=38.14 Aligned_cols=41 Identities=15% Similarity=0.139 Sum_probs=23.5
Q ss_pred hhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCc
Q 009409 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR 179 (535)
Q Consensus 137 ~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r 179 (535)
...+-+.+|++...+|+- +...|..+--++...+..|-|--
T Consensus 447 a~~iGeT~gIp~eIMGLT--iLAAGTSIPDlitSvIVARKGlG 487 (588)
T KOG1307|consen 447 ANIIGETLGIPDEIMGLT--ILAAGTSIPDLITSVIVARKGLG 487 (588)
T ss_pred HHHcccccCCCHHHhhhh--hhhcCCchHHhhHhhhhcccccc
Confidence 444666777777766643 33334445555666666665543
No 304
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=80.27 E-value=39 Score=30.23 Aligned_cols=42 Identities=14% Similarity=0.249 Sum_probs=25.6
Q ss_pred cchhhHHHHHHHhhhhHHHHHhhhHHHhccccchhHHHHHHHH
Q 009409 235 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (535)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 277 (535)
+++.+.-........++..+|..+++.+.+..+.. ..++.++
T Consensus 158 ~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~ 199 (209)
T PF06912_consen 158 KDRALRRALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPAL 199 (209)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHH
Confidence 33334455566666677777777777777777754 3444333
No 305
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=78.98 E-value=65 Score=31.24 Aligned_cols=148 Identities=18% Similarity=0.183 Sum_probs=84.8
Q ss_pred hHhhhhhhhcc-cCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhH----HHHHHHHHHHH-HHHhhh----hh
Q 009409 133 LSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ----TGVLIWSLATA-LLPLLA----GF 202 (535)
Q Consensus 133 ~~~~~~~~~~~-~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~----~~~~~~~~~~~-~~~~~~----~~ 202 (535)
+-.++..+... .|-+..|.+.+.+.|...+.+|+...-++.|.--.-+.+. .+++. +++.. +...++ ++
T Consensus 26 yElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllglig-g~Sa~~ly~~FA~~~~~~ 104 (508)
T COG4262 26 YELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIG-GVSAAALYLLFALESAPS 104 (508)
T ss_pred HHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhc-cchHHHHHHHHHhccchH
Confidence 33334444444 4667888999999999999999999888887533322221 11111 11111 111122 23
Q ss_pred hhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhc-cccchhHHHHHHHHHHHH
Q 009409 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII-ENLGWESVFYIFGLLGIA 281 (535)
Q Consensus 203 ~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~gw~~~f~~~~~~~~~ 281 (535)
-+.+++.-++.|.-.|.-.|..+.++..-. .+.....+.....-.+|...+.++-.++. ...|---.-...+++.++
T Consensus 105 ~~Vly~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~ 182 (508)
T COG4262 105 RLVLYALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLA 182 (508)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHH
Confidence 456788888999999999999888877622 22233333344446777777777766554 334432223334444444
Q ss_pred HH
Q 009409 282 WF 283 (535)
Q Consensus 282 ~~ 283 (535)
..
T Consensus 183 aA 184 (508)
T COG4262 183 AA 184 (508)
T ss_pred HH
Confidence 33
No 306
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=77.71 E-value=1.1e+02 Score=33.33 Aligned_cols=33 Identities=9% Similarity=0.099 Sum_probs=18.5
Q ss_pred hhhhHHHHHhhhHHHhccccchhHHHHHHHHHH
Q 009409 247 GLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (535)
Q Consensus 247 ~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~ 279 (535)
+..++.++..+++.++...++|...+++.++++
T Consensus 109 ~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 109 VMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 334455555555555544567777776666553
No 307
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.31 E-value=11 Score=29.09 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=28.5
Q ss_pred CcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCc
Q 009409 466 PEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS 500 (535)
Q Consensus 466 ~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~ 500 (535)
+..++.+.++--..-.+++++.....||+.|++-+
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45577788888888888899889999999998743
No 308
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=74.55 E-value=12 Score=40.91 Aligned_cols=50 Identities=12% Similarity=0.112 Sum_probs=30.3
Q ss_pred hHhhhhhhhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHH
Q 009409 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT 184 (535)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 184 (535)
+..+...+-..+|++...+|+.+.+. +..+.-++....+-|-|.-.+-+.
T Consensus 952 lV~~at~IG~vlGIse~VmGlTfLA~--GTSIPDlisSvivArkG~gdMAVa 1001 (1096)
T TIGR00927 952 MVWWAHQVGETIGISEEIMGLTILAA--GTSIPDLITSVIVARKGLGDMAVS 1001 (1096)
T ss_pred HHHHHHHhhhhcCCChhhhhhhhhhh--hcccHHHHHHHHHHHccCCcceee
Confidence 33345556777888888776554433 555666666666666665554433
No 309
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=72.70 E-value=83 Score=32.84 Aligned_cols=32 Identities=13% Similarity=0.239 Sum_probs=18.8
Q ss_pred eeccCcCCCCccccccccccccccccCCCCcc
Q 009409 13 VFAHNTSSGRLVFAKRNSSKRQKFHLYPSEGC 44 (535)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (535)
...++.+.|+.+...+...+..+..-..++++
T Consensus 17 ~~~~~~slGevL~Gdr~~~S~y~i~f~~~~~c 48 (521)
T PF02990_consen 17 IEHKSESLGEVLRGDRIQNSPYEIKFLQNVTC 48 (521)
T ss_pred cccccCCHHHHhccCceecCceEEEEecCcch
Confidence 44566777888876666665554444444333
No 310
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.68 E-value=20 Score=27.67 Aligned_cols=18 Identities=17% Similarity=0.276 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 009409 383 LASVLVTSIAAQFADNLI 400 (535)
Q Consensus 383 ~~~~~~~~~~g~l~dr~~ 400 (535)
+.+++.....||+.||+-
T Consensus 53 IsGilVGa~iG~llD~~a 70 (116)
T COG5336 53 ISGILVGAGIGWLLDKFA 70 (116)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 445555667889999973
No 311
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=70.29 E-value=1e+02 Score=29.47 Aligned_cols=28 Identities=18% Similarity=0.286 Sum_probs=12.4
Q ss_pred HHHHHHHhhhccCCch-hhHHHHhhhccc
Q 009409 206 LVLSRVLVGIGEGVSP-SAATDLIARSIP 233 (535)
Q Consensus 206 l~~~~~~~G~~~~~~~-~~~~~~~~~~~~ 233 (535)
-.+.-.+.+++.|.+. ....-++.+.+.
T Consensus 263 ~~~~~~~~a~aaG~~lyv~~~ell~~~~~ 291 (317)
T PF02535_consen 263 DIVSGILLAFAAGTFLYVAFVELLPEEFH 291 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455666555433 222234444443
No 312
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=68.71 E-value=99 Score=28.62 Aligned_cols=25 Identities=8% Similarity=-0.233 Sum_probs=14.2
Q ss_pred HHHHHHHhhhhHHHHHhhHHHHHHH
Q 009409 342 IYAHFCGSWGHYTCLSWLPTYFSEE 366 (535)
Q Consensus 342 ~l~~~~~~~~~~~~~~~~p~~l~~~ 366 (535)
.+...+.....|+.+..=..|++++
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhC
Confidence 3344444555666666666677654
No 313
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=66.58 E-value=51 Score=28.22 Aligned_cols=61 Identities=11% Similarity=0.071 Sum_probs=41.1
Q ss_pred cccccchhhHHHHHHHhhhhHHHHHhhhHHHhcccc------chhHHHHHHHHHHHHHHHHhhhccc
Q 009409 231 SIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------GWESVFYIFGLLGIAWFSGFKILQE 291 (535)
Q Consensus 231 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------gw~~~f~~~~~~~~~~~~~~~~~~~ 291 (535)
.++.+++.+..+.+.++.-.+...--++=+.+.... .+...+|+.++++.+.++..-.+++
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V~~ 80 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSVSK 80 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccccH
Confidence 355566667777777766666666666655554332 5888899999988887777655544
No 314
>PRK10263 DNA translocase FtsK; Provisional
Probab=64.53 E-value=93 Score=35.91 Aligned_cols=19 Identities=32% Similarity=0.419 Sum_probs=13.6
Q ss_pred hhhhhHHHHHHHHHhcccC
Q 009409 481 AVPGIVGVALTGYLLDSTH 499 (535)
Q Consensus 481 ~lg~~igp~i~G~l~~~~g 499 (535)
..|+++|..+...+...+|
T Consensus 141 ~gGGIIG~lLs~lL~~LfG 159 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLH 159 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 3577888877777777665
No 315
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=63.78 E-value=1.7e+02 Score=29.40 Aligned_cols=25 Identities=20% Similarity=0.085 Sum_probs=13.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcC
Q 009409 379 ILPPLASVLVTSIAAQFADNLIATG 403 (535)
Q Consensus 379 ~~~~~~~~~~~~~~g~l~dr~~~~~ 403 (535)
......+..+..+...+.++.-.++
T Consensus 243 ~~NT~la~a~g~l~~~~~~~~~~gk 267 (404)
T TIGR03644 243 FANTNAAAAGGAIAALLLTKLLFGK 267 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3334444455555666667664443
No 316
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=63.30 E-value=66 Score=31.34 Aligned_cols=96 Identities=17% Similarity=0.039 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHHhhhccchhhhcccCCch--hhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhh
Q 009409 152 GLVQSSFFWGYALSQLPGGWLAKIFGGRK--VLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (535)
Q Consensus 152 ~~~~s~~~~~~~~~~~~~g~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~ 229 (535)
|..-++..+..+++.+..|.+--.+.|.. .+.++.+.- .+.+....-++++|..+++..+.+.-.....+.+...++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~-agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQ-AGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHh-hhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 45556666777788888898876666552 233333332 333333345677788888888887777777888888888
Q ss_pred hcccccchhhHHHHHHHhh
Q 009409 230 RSIPLEERSRAVSFVFGGL 248 (535)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~ 248 (535)
...+.+.-|..+|+.....
T Consensus 353 ~nL~~e~~gLvFGiNTFvA 371 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFVA 371 (433)
T ss_pred HhhhhhhheeeeehHHHHH
Confidence 8888888899998877543
No 317
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=58.47 E-value=8.6 Score=30.79 Aligned_cols=19 Identities=11% Similarity=-0.069 Sum_probs=7.9
Q ss_pred HHHHHHhhhhhccCCCCCC
Q 009409 512 FYLTGTIVWLAFASSKPQN 530 (535)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~ 530 (535)
+.+++++.|+++|++|+++
T Consensus 78 Ig~Illi~y~irR~~Kk~~ 96 (122)
T PF01102_consen 78 IGIILLISYCIRRLRKKSS 96 (122)
T ss_dssp HHHHHHHHHHHHHHS----
T ss_pred HHHHHHHHHHHHHHhccCC
Confidence 3344455556666665543
No 318
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=58.25 E-value=1.9e+02 Score=28.27 Aligned_cols=56 Identities=14% Similarity=-0.005 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhccCCcchhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009409 438 EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 495 (535)
Q Consensus 438 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 495 (535)
+......+|...+.=.+..+.+..+ ..+......+.....-++|...+.++..++.
T Consensus 108 ly~lt~vIG~LVG~EiPL~mrml~~--r~a~~k~~~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 108 LYALTAVIGVLVGAEIPLLMRMLQR--RQAKAKDLGSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHH--HHHHHHhhhhhhhhhHhhhhhhHHHHHHHHH
Confidence 3344455665555544544444443 1122233333344446777777776665554
No 319
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=53.89 E-value=55 Score=31.81 Aligned_cols=16 Identities=31% Similarity=0.191 Sum_probs=11.5
Q ss_pred hcccCCchhhHHHHHH
Q 009409 173 AKIFGGRKVLQTGVLI 188 (535)
Q Consensus 173 ~dr~g~r~~~~~~~~~ 188 (535)
.||+...|++.+..-+
T Consensus 208 ~e~ft~sKllav~~si 223 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVSI 223 (416)
T ss_pred cchhhHHHHHHHHHhh
Confidence 8999888877655443
No 320
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=53.26 E-value=55 Score=30.98 Aligned_cols=13 Identities=15% Similarity=0.151 Sum_probs=4.9
Q ss_pred cHHHHHHHHHHHH
Q 009409 435 PHWEIVGILTAGL 447 (535)
Q Consensus 435 ~~~~~~~~~~~g~ 447 (535)
++...+.+++.++
T Consensus 23 ~~l~~~~~~~~~F 35 (284)
T PF12805_consen 23 PWLLILVLALLTF 35 (284)
T ss_pred cHHHHHHHHHHHH
Confidence 3333333333333
No 321
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=51.12 E-value=2.7e+02 Score=27.93 Aligned_cols=26 Identities=8% Similarity=-0.087 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCC
Q 009409 379 ILPPLASVLVTSIAAQFADNLIATGV 404 (535)
Q Consensus 379 ~~~~~~~~~~~~~~g~l~dr~~~~~~ 404 (535)
......+..+..+...+.|++..+|.
T Consensus 229 ~~nT~lA~a~g~l~~~~~~~~~~gk~ 254 (403)
T TIGR00836 229 AVNTNLAAAAGGLTWLLIDWLKHGKP 254 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 33334445555556677777654433
No 322
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=49.38 E-value=2.7e+02 Score=27.39 Aligned_cols=35 Identities=23% Similarity=0.463 Sum_probs=22.9
Q ss_pred hcccccchhhHHHHHHH-hhhhHHHHHhhhHHHhccccchh
Q 009409 230 RSIPLEERSRAVSFVFG-GLSFGSVAGLLLAPPIIENLGWE 269 (535)
Q Consensus 230 ~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~ 269 (535)
|+.| .+|...+|.... ..+.|+++||.++. .+||-
T Consensus 48 DYvP-~~~~vlfghhf~sIAGaGPI~GPi~aa----~~Gwl 83 (376)
T PF02554_consen 48 DYVP-TNKWVLFGHHFASIAGAGPIVGPILAA----QFGWL 83 (376)
T ss_pred CCCC-CchHHhhHHHHHHHhccccchHHHHHH----Hhcch
Confidence 4455 566777777544 45577777777763 56876
No 323
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=49.37 E-value=76 Score=30.02 Aligned_cols=34 Identities=26% Similarity=0.215 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcc
Q 009409 184 TGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 217 (535)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~ 217 (535)
.+.+++++++++..+..++.+.+.+..++.+++.
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~ 37 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFFF 37 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 3444444555555555555455555555555543
No 324
>PRK10263 DNA translocase FtsK; Provisional
Probab=48.65 E-value=45 Score=38.30 Aligned_cols=19 Identities=32% Similarity=0.305 Sum_probs=9.6
Q ss_pred hHHHHHhhhHHHhccccch
Q 009409 250 FGSVAGLLLAPPIIENLGW 268 (535)
Q Consensus 250 ~g~~~g~~~~~~l~~~~gw 268 (535)
.|+++|.+++.++...+|.
T Consensus 142 gGGIIG~lLs~lL~~LfG~ 160 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHS 160 (1355)
T ss_pred ccchHHHHHHHHHHHHHhH
Confidence 3555555555555444443
No 325
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=48.01 E-value=37 Score=31.35 Aligned_cols=131 Identities=12% Similarity=0.121 Sum_probs=75.1
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHHhhhhhhHhhhhh-hhcccCCCccchhHHHHHHHHHHHhhhccch-hhhcccC
Q 009409 100 ASYWPPWKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGG-WLAKIFG 177 (535)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g-~l~dr~g 177 (535)
.-.|.-|. ++..+.-+.+.+.+.-+-.++-..+++. +.+++++..+...++-.+.++....-+.+-. +--.+..
T Consensus 191 Rm~W~~WF----~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkr 266 (412)
T KOG4830|consen 191 RMHWTSWF----GHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKR 266 (412)
T ss_pred cccchhhh----hhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcce
Confidence 34455554 2344455566666666666666666666 6677888777777766655554443322211 1112333
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhhhhh-HHHHHHHHhhhccCCchhhHHHHhhhcccc
Q 009409 178 GRKVLQTGVLIWSLATALLPLLAGFMP-GLVLSRVLVGIGEGVSPSAATDLIARSIPL 234 (535)
Q Consensus 178 ~r~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 234 (535)
.|..+..|.+++..+...+.+....+. -.++...+.|++.+........+.++...+
T Consensus 267 lKayYsaGgiiwifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~ 324 (412)
T KOG4830|consen 267 LKAYYSAGGIIWIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINK 324 (412)
T ss_pred eeeeeecccHHHHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 455566666666655544434444332 244556778999888877777777766653
No 326
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=47.91 E-value=25 Score=31.56 Aligned_cols=95 Identities=22% Similarity=0.222 Sum_probs=57.8
Q ss_pred ccchhhhcccCCch--------hhHHHHHHHHHHHHHHHh-hh-hhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccc
Q 009409 167 LPGGWLAKIFGGRK--------VLQTGVLIWSLATALLPL-LA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE 236 (535)
Q Consensus 167 ~~~g~l~dr~g~r~--------~~~~~~~~~~~~~~~~~~-~~-~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 236 (535)
+=.+.+.||||-+- +++++.++-++..-+++- ++ -++..-.....-.|+|.+.....+..-+.+.+| +.
T Consensus 125 p~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P-~~ 203 (241)
T PF11299_consen 125 PNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAYP-EM 203 (241)
T ss_pred cceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHCc-ch
Confidence 34567889998542 445554443333222211 11 111223455566799999998888888888887 66
Q ss_pred hhhHHHHHHHhhhhHHHHHhhhHHHh
Q 009409 237 RSRAVSFVFGGLSFGSVAGLLLAPPI 262 (535)
Q Consensus 237 r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (535)
.....++..+.+.+..+.|-.+.-++
T Consensus 204 a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 204 ADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777777777777766666555443
No 327
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=47.50 E-value=3.1e+02 Score=27.51 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=21.5
Q ss_pred cchhhHHHHHHHhhhhHHHHHhhhHHHhccccch
Q 009409 235 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (535)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 268 (535)
.||.+...+.....-++..+-|+++-+.-...||
T Consensus 107 aeR~~~~~~ii~~~l~~~~vy~~~~~w~w~~~Gw 140 (399)
T PF00909_consen 107 AERIKFSAYIIFGFLWGGLVYPPLAHWVWGENGW 140 (399)
T ss_dssp CCCCHHHHHHHHHHHCCCCTHHHHHHHHHCHCHH
T ss_pred eceeeehHHHHHHHHHhhhhccccceEEEecchh
Confidence 4566777777666667777777766555443333
No 328
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=45.63 E-value=3.1e+02 Score=27.07 Aligned_cols=231 Identities=13% Similarity=0.002 Sum_probs=0.0
Q ss_pred cccccccccccccccCCCCcccccccccchhhhccccccccccccccccCccCCCCCCCCCCCCCCCCCCCcccCCCCCC
Q 009409 24 VFAKRNSSKRQKFHLYPSEGCSRLRVSCSIKEKENVKEETDKFDEVLTGLRVDEPGSVSGFDSESGQVRGTEEVGRASYW 103 (535)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (535)
+++++.++.+......++.+....+...++....+.++.....++.+++.+..........+..+......++......+
T Consensus 144 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (385)
T PF03547_consen 144 LLESRSEKEDKSEEEPSSAESIDSEQEDSDEMSLDGSSPSSTEEEIDEDGSPSSTPSQSSASAPSSVSTSPSPSNSTGAE 223 (385)
T ss_pred hhcccccccccccccccccccccccccCCccccCCcccccccccccccCCcccccccccccccchhhccCCcccccchhh
Q ss_pred CCCCCCchh------HHHHHHHHHHHHHHHhhhhhhHhhhh----hhhcccCCCccchhHHHHHHHHHHHhhhccchhhh
Q 009409 104 PPWKNIPQR------YKLIGTTSLAFVICNMDKVNLSVAII----PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLA 173 (535)
Q Consensus 104 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~ 173 (535)
....+..++ ++.+.--.+...+.++......+..| ....+.=-.........+++.+|..+..-....-.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~nP~~~a~~lgli~~~~~~~~~~~~~~~i~~~~~~lg~~~~pl~l~~lG~~l~~~~~~~~~ 303 (385)
T PF03547_consen 224 QKSSNSTRKKLKKSILKLFKNPPLIAIILGLIIGLIPPLRPLFFPSFITDSLSYLGAAAVPLALFVLGASLARGPRKSAL 303 (385)
T ss_pred hhhhhhHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcccchHhHHHHHHHHHHhhhHHHHHHHHHHHHhcCCcccch
Q ss_pred cccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHH
Q 009409 174 KIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSV 253 (535)
Q Consensus 174 dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 253 (535)
+..-.....+.=+++.=+..+.......--....-.-.++ .+...+....++++.+. .+...+.+.......++..
T Consensus 304 ~~~~~~~~~~~rlii~P~i~~~~~~~~~l~~~~~~~~~~~---~~~P~a~~~~~~a~~~~-~~~~~~s~~~~~~~~~~~~ 379 (385)
T PF03547_consen 304 GWKPSIIAVLVRLIILPLIGIGIVFLLGLDGDMARVLILQ---AAMPTAINSFVIASLYG-LDEEEASSIVFWSTLLSIP 379 (385)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHh---ccCCchHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHH
Q ss_pred HHhhh
Q 009409 254 AGLLL 258 (535)
Q Consensus 254 ~g~~~ 258 (535)
.-|+.
T Consensus 380 ~~~~~ 384 (385)
T PF03547_consen 380 TLPLW 384 (385)
T ss_pred HHHHH
No 329
>PTZ00101 rhomboid-1 protease; Provisional
Probab=45.38 E-value=2.5e+02 Score=26.51 Aligned_cols=35 Identities=17% Similarity=0.088 Sum_probs=20.0
Q ss_pred HHHHHhhhccchhhhcc-cCCchhhHHHHHHHHHHH
Q 009409 159 FWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 159 ~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~ 193 (535)
.+..+......|...+| +|+++..++=.+....+.
T Consensus 118 Ll~Nm~~l~~~G~~lE~~~G~~r~~ilYl~sGi~G~ 153 (278)
T PTZ00101 118 TFFNVFFQLRMGFTLEKNYGIVKIIILYFLTGIYGN 153 (278)
T ss_pred HHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHH
Confidence 34445566666776665 798887754433333333
No 330
>COG0701 Predicted permeases [General function prediction only]
Probab=44.94 E-value=2.9e+02 Score=26.57 Aligned_cols=27 Identities=15% Similarity=0.074 Sum_probs=15.1
Q ss_pred HHHHHhhHHHHHHH-hCCChhhHHHHHh
Q 009409 353 YTCLSWLPTYFSEE-LSLNLTEAAWVSI 379 (535)
Q Consensus 353 ~~~~~~~p~~l~~~-~g~s~~~~g~~~~ 379 (535)
..+..|.|...... .|.+...+-.+..
T Consensus 210 ~~i~~~vp~~~l~~~~G~~~~~s~~~a~ 237 (317)
T COG0701 210 GAIQVYLPQDILLSYLGSNGIFSVLLAV 237 (317)
T ss_pred HHHHhccCHHHHHHHhcCCchHHHHHHH
Confidence 45567777776555 5665444433333
No 331
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=44.60 E-value=24 Score=32.67 Aligned_cols=39 Identities=5% Similarity=0.144 Sum_probs=19.2
Q ss_pred HhcccCcchHHHHHHHHHHHHHHHhhhhhccCCCCCCCCC
Q 009409 494 LLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFST 533 (535)
Q Consensus 494 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (535)
....+.+|..+-+++.++.++ .++++.+..|||+++|..
T Consensus 254 A~aaF~Pcgiaalvllil~vv-liiLYiWlyrrRK~swkh 292 (295)
T TIGR01478 254 ATSTFLPYGIAALVLIILTVV-LIILYIWLYRRRKKSWKH 292 (295)
T ss_pred HHHhhcccHHHHHHHHHHHHH-HHHHHHHHHHhhcccccc
Confidence 333344566665554443333 334444444555566654
No 332
>PTZ00370 STEVOR; Provisional
Probab=43.07 E-value=1.1e+02 Score=28.58 Aligned_cols=41 Identities=5% Similarity=0.133 Sum_probs=20.1
Q ss_pred HHHHhcccCcchHHHHHHHHHHHHHHHhhhhhccCCCCCCCC
Q 009409 491 TGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFS 532 (535)
Q Consensus 491 ~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (535)
++.....+.+|..+-+++.++.++. ++++.+..|||+++|.
T Consensus 247 AtaAsaaF~Pygiaalvllil~vvl-iilYiwlyrrRK~swk 287 (296)
T PTZ00370 247 ASAASSAFYPYGIAALVLLILAVVL-IILYIWLYRRRKNSWK 287 (296)
T ss_pred HHHHHHhhcccHHHHHHHHHHHHHH-HHHHHHHHHhhcchhH
Confidence 3444444556666665555444333 3334444444555553
No 333
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=42.35 E-value=2.2e+02 Score=25.04 Aligned_cols=29 Identities=21% Similarity=0.044 Sum_probs=14.2
Q ss_pred hhhHHHhccccchhHHHHHHHHHHHHHHH
Q 009409 256 LLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (535)
Q Consensus 256 ~~~~~~l~~~~gw~~~f~~~~~~~~~~~~ 284 (535)
.++++.......-.|..-..|++.+...+
T Consensus 43 Sl~~~~~l~~ip~~wiLGlLGliPI~lGi 71 (191)
T PF03596_consen 43 SLLGAFGLLFIPPEWILGLLGLIPIYLGI 71 (191)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 44444444444555554555555544443
No 334
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=41.17 E-value=73 Score=23.16 Aligned_cols=32 Identities=22% Similarity=0.226 Sum_probs=17.7
Q ss_pred hHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhh
Q 009409 485 IVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV 519 (535)
Q Consensus 485 ~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 519 (535)
.+.+.+.|++.+.. ...+++.++.++++.+++
T Consensus 21 ~iisfi~Gy~~q~~---~~~~~~~~~g~~~~~lv~ 52 (76)
T PF06645_consen 21 AIISFIVGYITQSF---SYTFYIYGAGVVLTLLVV 52 (76)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhe
Confidence 44567788888854 444554444444444433
No 335
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=40.14 E-value=4.4e+02 Score=27.27 Aligned_cols=50 Identities=16% Similarity=0.309 Sum_probs=33.7
Q ss_pred CCcchhHHHHHHHHhhhhhhhHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Q 009409 465 SPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 515 (535)
Q Consensus 465 ~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~~~~~~~~~~~~ 515 (535)
+|+.+..-+|-.+...++-..+...+++.+.+..| |.....+.-++.++.
T Consensus 313 ~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~G-W~~~AlitPiv~lit 362 (491)
T PF03219_consen 313 DPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFG-WRTAALITPIVILIT 362 (491)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHhHHHHHHH
Confidence 45666777787777777777777788889998885 665555543433333
No 336
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.82 E-value=6.9e+02 Score=29.11 Aligned_cols=48 Identities=8% Similarity=0.086 Sum_probs=25.9
Q ss_pred hhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHH
Q 009409 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 398 (535)
Q Consensus 351 ~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr 398 (535)
..|++.+|...++...-..++.+.-..+.....++....-...+.-|-
T Consensus 904 ~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~ 951 (1228)
T KOG0055|consen 904 FVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDI 951 (1228)
T ss_pred HHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHH
Confidence 345666777777766545566655444444444444444444455444
No 337
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=37.56 E-value=58 Score=22.73 Aligned_cols=24 Identities=17% Similarity=0.261 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCC
Q 009409 505 LFAPSIFFYLTGTIVWLAFASSKP 528 (535)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~ 528 (535)
++++++|+++.+++++.++.|.+.
T Consensus 5 ~iLi~ICVaii~lIlY~iYnr~~~ 28 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIYNRKKT 28 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc
Confidence 345566677777888877765544
No 338
>PHA03049 IMV membrane protein; Provisional
Probab=37.07 E-value=65 Score=22.38 Aligned_cols=23 Identities=17% Similarity=0.254 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHhhhhhccCCCC
Q 009409 506 FAPSIFFYLTGTIVWLAFASSKP 528 (535)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~ 528 (535)
+++.+|+++.+++++-++.|++.
T Consensus 6 ~l~iICVaIi~lIvYgiYnkk~~ 28 (68)
T PHA03049 6 ILVIICVVIIGLIVYGIYNKKTT 28 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhcccc
Confidence 34456677777888877765543
No 339
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=36.10 E-value=49 Score=21.51 Aligned_cols=13 Identities=38% Similarity=0.475 Sum_probs=5.7
Q ss_pred hhhhHHHHHHHHH
Q 009409 482 VPGIVGVALTGYL 494 (535)
Q Consensus 482 lg~~igp~i~G~l 494 (535)
+|+.+|..+.+.+
T Consensus 6 iGa~vGg~l~~~l 18 (48)
T PF04226_consen 6 IGAFVGGWLFGLL 18 (48)
T ss_pred HHHHHHHHHHHHh
Confidence 3444444444433
No 340
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=32.54 E-value=3.5e+02 Score=23.88 Aligned_cols=31 Identities=32% Similarity=0.420 Sum_probs=23.5
Q ss_pred ccchhhHHHHHHHhhhhHHHHHhhhHHHhcc
Q 009409 234 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (535)
Q Consensus 234 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 264 (535)
.++.+++.++...+..+|.++|.++..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4556788888888888888888888777654
No 341
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=31.70 E-value=3.2e+02 Score=23.07 Aligned_cols=27 Identities=19% Similarity=0.108 Sum_probs=20.7
Q ss_pred hhhccCCcchhHHHHHHHHhhhhhhhH
Q 009409 460 THQDISPEYASILLGITNTVGAVPGIV 486 (535)
Q Consensus 460 ~~~~~~~~~~g~~~g~~~~~~~lg~~i 486 (535)
+...-++++.|+..|+-.+-.+++-+.
T Consensus 119 lSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 119 LSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred cccccCCCCCCCcccHHHHHHhHHHHH
Confidence 344578888999999988888876554
No 342
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=31.50 E-value=2e+02 Score=31.34 Aligned_cols=21 Identities=5% Similarity=-0.186 Sum_probs=11.3
Q ss_pred cCCCcHHHHHHHHHHHHHHhh
Q 009409 431 DLGLPHWEIVGILTAGLALSS 451 (535)
Q Consensus 431 ~~~~~~~~~~~~~~~g~~~~~ 451 (535)
..+.+++...++++.+++++.
T Consensus 77 l~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 77 LFPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HhcchHHHHHHHHHHHHHHHH
Confidence 345566666555555554443
No 343
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=31.50 E-value=51 Score=27.67 Aligned_cols=47 Identities=17% Similarity=0.198 Sum_probs=30.7
Q ss_pred HHHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHH
Q 009409 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA 254 (535)
Q Consensus 205 ~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 254 (535)
.+++...+.|+| .....+.+++..+++++-|..+|+-..--+++-+.
T Consensus 99 ~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 99 VLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 344444444443 23455667777788888999999988877776554
No 344
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=30.29 E-value=21 Score=29.19 Aligned_cols=19 Identities=16% Similarity=0.158 Sum_probs=10.0
Q ss_pred hHHHHHHHHHHHHHHHHhh
Q 009409 269 ESVFYIFGLLGIAWFSGFK 287 (535)
Q Consensus 269 ~~~f~~~~~~~~~~~~~~~ 287 (535)
||+++++.++.++++++++
T Consensus 1 RW~l~~iii~~i~l~~~~~ 19 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLF 19 (130)
T ss_pred CeeeHHHHHHHHHHHHHHH
Confidence 5666666555544444333
No 345
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=30.10 E-value=2.5e+02 Score=30.59 Aligned_cols=22 Identities=18% Similarity=0.297 Sum_probs=11.8
Q ss_pred hcCCCcHHHHHHHHHHHHHHhh
Q 009409 430 IDLGLPHWEIVGILTAGLALSS 451 (535)
Q Consensus 430 ~~~~~~~~~~~~~~~~g~~~~~ 451 (535)
+..+.+++...++++.++++.+
T Consensus 76 ll~~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 76 LLFGKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred HHhcCcHHHHHHHHHHHHHHHH
Confidence 3355566666665555544443
No 346
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=29.92 E-value=95 Score=24.15 Aligned_cols=48 Identities=19% Similarity=0.227 Sum_probs=39.9
Q ss_pred cchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHH
Q 009409 149 SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (535)
Q Consensus 149 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (535)
...|=+.++|.-.+++.++++++..|+..+-+.=.++..+..++..++
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 456778899999999999999999999999888888877766665443
No 347
>PRK01766 multidrug efflux protein; Reviewed
Probab=29.91 E-value=6e+02 Score=25.73 Aligned_cols=10 Identities=20% Similarity=0.268 Sum_probs=5.0
Q ss_pred chhhhcccCC
Q 009409 169 GGWLAKIFGG 178 (535)
Q Consensus 169 ~g~l~dr~g~ 178 (535)
...+++.+|+
T Consensus 72 ~~~vs~~~g~ 81 (456)
T PRK01766 72 TPIVAQLNGA 81 (456)
T ss_pred HHHHHHHhcC
Confidence 3445555554
No 348
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=29.58 E-value=4.6e+02 Score=24.32 Aligned_cols=13 Identities=15% Similarity=0.360 Sum_probs=6.6
Q ss_pred cchhHHHHHHHHH
Q 009409 266 LGWESVFYIFGLL 278 (535)
Q Consensus 266 ~gw~~~f~~~~~~ 278 (535)
..-++..++.+++
T Consensus 127 ipr~~T~~~~t~L 139 (294)
T KOG2881|consen 127 IPRKYTYYLATAL 139 (294)
T ss_pred chHHHHHHHHHHH
Confidence 3445556555443
No 349
>PTZ00370 STEVOR; Provisional
Probab=29.20 E-value=56 Score=30.40 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=20.2
Q ss_pred HHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhccc
Q 009409 254 AGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (535)
Q Consensus 254 ~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 291 (535)
.|+..+.......+|-..-++..+++++++++..++.+
T Consensus 243 agtAAtaAsaaF~Pygiaalvllil~vvliilYiwlyr 280 (296)
T PTZ00370 243 AGTAASAASSAFYPYGIAALVLLILAVVLIILYIWLYR 280 (296)
T ss_pred cchHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433333445665666666666666666655544
No 350
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.10 E-value=1.9e+02 Score=29.89 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=19.6
Q ss_pred HhC-CChhhHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 009409 366 ELS-LNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (535)
Q Consensus 366 ~~g-~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 399 (535)
.+| +++..-|-+++...+.-++.++++|+.+.|+
T Consensus 352 ~lGflSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 352 CLGFLSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred HhccCCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 344 3666666565555555555566666666555
No 351
>COG3619 Predicted membrane protein [Function unknown]
Probab=29.05 E-value=4.4e+02 Score=23.93 Aligned_cols=26 Identities=15% Similarity=-0.184 Sum_probs=14.9
Q ss_pred HHHhhhhhhhHHHHHHHHHhcccCcc
Q 009409 476 TNTVGAVPGIVGVALTGYLLDSTHSW 501 (535)
Q Consensus 476 ~~~~~~lg~~igp~i~G~l~~~~g~~ 501 (535)
....--++.+.|...++.+...+|.+
T Consensus 173 ~~~~~il~f~~GAi~g~ll~~~~g~~ 198 (226)
T COG3619 173 IYLSLILSFIVGAICGALLTLFFGLK 198 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33344455566666666666666544
No 352
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=27.82 E-value=6.5e+02 Score=25.63 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=38.0
Q ss_pred HHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHH
Q 009409 344 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ 394 (535)
Q Consensus 344 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~ 394 (535)
..+-..+..|+-....|...-...|++.++...+.+.--+.+-++.++-..
T Consensus 21 lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~ 71 (451)
T COG2233 21 LGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLL 71 (451)
T ss_pred HHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444455666778888888889999999998888877777777776554
No 353
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.88 E-value=1.5e+02 Score=29.65 Aligned_cols=32 Identities=28% Similarity=0.481 Sum_probs=20.0
Q ss_pred hhHHHHHHHHHHHhhhccchhhh----cccCCchhh
Q 009409 151 AGLVQSSFFWGYALSQLPGGWLA----KIFGGRKVL 182 (535)
Q Consensus 151 ~~~~~s~~~~~~~~~~~~~g~l~----dr~g~r~~~ 182 (535)
=|-+.+...+.+++.+++.|+.+ .|.|-|+++
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~Wi 360 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSGSFYARLGGRRWI 360 (593)
T ss_pred chHHHHHHHHHHHhcccccccccceeeehhccHHHH
Confidence 35566666677777777766655 466655543
No 354
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=26.25 E-value=1.2e+02 Score=26.01 Aligned_cols=16 Identities=6% Similarity=0.270 Sum_probs=9.7
Q ss_pred CCCCCCCCCCCchhHH
Q 009409 99 RASYWPPWKNIPQRYK 114 (535)
Q Consensus 99 ~~~~~~~~~~~~~~~~ 114 (535)
+..+|..+.+++++++
T Consensus 23 ~~L~W~~ffkLRk~rr 38 (173)
T PF08566_consen 23 PQLTWNEFFKLRKSRR 38 (173)
T ss_pred CCCCHHHHHHHHHHhh
Confidence 3677887765554443
No 355
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=26.24 E-value=7.3e+02 Score=25.51 Aligned_cols=12 Identities=17% Similarity=-0.283 Sum_probs=8.4
Q ss_pred hhhhHHHHHHHH
Q 009409 201 GFMPGLVLSRVL 212 (535)
Q Consensus 201 ~~~~~l~~~~~~ 212 (535)
-.||.+++.|++
T Consensus 179 ~syWLFY~vrIl 190 (505)
T PF06638_consen 179 FSYWLFYGVRIL 190 (505)
T ss_pred HHHHHHhhheee
Confidence 345888887766
No 356
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=25.74 E-value=2.9e+02 Score=27.96 Aligned_cols=24 Identities=4% Similarity=-0.119 Sum_probs=14.2
Q ss_pred chhhHHHHhhhcccccchhhHHHH
Q 009409 220 SPSAATDLIARSIPLEERSRAVSF 243 (535)
Q Consensus 220 ~~~~~~~~~~~~~~~~~r~~~~~~ 243 (535)
+......|+.......+|+..++.
T Consensus 362 ~i~Li~~Y~~~vl~~~k~~~~~~~ 385 (430)
T PF06123_consen 362 CIGLISLYLSSVLKSWKRGLIFAG 385 (430)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHH
Confidence 334555666667766666655543
No 357
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=25.56 E-value=5.5e+02 Score=23.85 Aligned_cols=21 Identities=14% Similarity=0.083 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcc
Q 009409 504 SLFAPSIFFYLTGTIVWLAFA 524 (535)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~ 524 (535)
..-..++.+.+....++.+.+
T Consensus 116 ~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 116 WLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred HHHHHHHHHHHHHHHheeeec
Confidence 333344444444444444443
No 358
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=25.50 E-value=1.8e+02 Score=19.28 Aligned_cols=37 Identities=16% Similarity=0.064 Sum_probs=21.7
Q ss_pred HHHHHHHhhhccchhhhcc-cCCchhhHHHHHHHHHHH
Q 009409 157 SFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLAT 193 (535)
Q Consensus 157 ~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~ 193 (535)
...+..++.....|+..|+ ++.++...+..++.++..
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~~ 45 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIAA 45 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 3344445555666777775 677666666555544444
No 359
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=25.48 E-value=1.8e+02 Score=28.54 Aligned_cols=39 Identities=18% Similarity=0.171 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHH
Q 009409 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLV 154 (535)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 154 (535)
++.+....+...+..-.+--.+....+++++|.+-+|++
T Consensus 292 ~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~Figli 330 (441)
T KOG1397|consen 292 IIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLI 330 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheee
Confidence 333333444444443334444566778888888776654
No 360
>PRK02237 hypothetical protein; Provisional
Probab=25.15 E-value=1.4e+02 Score=23.25 Aligned_cols=47 Identities=17% Similarity=0.119 Sum_probs=39.2
Q ss_pred chhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHH
Q 009409 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (535)
Q Consensus 150 ~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (535)
..|=+.++|.-.+++.++++++..|+..+-+.=.++..+..++..+.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 47788899999999999999999999998888888877766666443
No 361
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=24.69 E-value=6.8e+02 Score=24.61 Aligned_cols=12 Identities=17% Similarity=-0.006 Sum_probs=8.9
Q ss_pred hhhHHHHHHHHh
Q 009409 202 FMPGLVLSRVLV 213 (535)
Q Consensus 202 ~~~~l~~~~~~~ 213 (535)
.+|.+++.|++.
T Consensus 204 ayWLFYiVri~~ 215 (531)
T KOG3814|consen 204 AYWLFYIVRILD 215 (531)
T ss_pred HHHHHHhhhhhc
Confidence 458888888776
No 362
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=24.53 E-value=3.5e+02 Score=29.50 Aligned_cols=49 Identities=22% Similarity=0.097 Sum_probs=31.4
Q ss_pred chhhhccc----CCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcc
Q 009409 169 GGWLAKIF----GGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 217 (535)
Q Consensus 169 ~g~l~dr~----g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~ 217 (535)
++-+.|.= ||.+-++++.++++++++...+..++.+.+....++.+++.
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~ 95 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGF 95 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 34455543 55677788888888888777666666555555555555553
No 363
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=24.51 E-value=7.2e+02 Score=24.87 Aligned_cols=41 Identities=20% Similarity=0.225 Sum_probs=28.8
Q ss_pred HHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHH
Q 009409 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA 393 (535)
Q Consensus 353 ~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g 393 (535)
++-....|..+.+..|+++.+...+.....+++.++.++-.
T Consensus 9 ~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~ 49 (406)
T TIGR03173 9 YAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQT 49 (406)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455667777777799988777777777777777776654
No 364
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=24.37 E-value=2.3e+02 Score=30.89 Aligned_cols=48 Identities=19% Similarity=0.132 Sum_probs=30.2
Q ss_pred hhhhcc----cCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcc
Q 009409 170 GWLAKI----FGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 217 (535)
Q Consensus 170 g~l~dr----~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~ 217 (535)
+-++|. -||.+-++++.++++++++...+..++.+.+....++.+++.
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 445554 355666777778878777777666666556655555555543
No 365
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=23.80 E-value=5.2e+02 Score=22.97 Aligned_cols=52 Identities=15% Similarity=0.078 Sum_probs=26.1
Q ss_pred hhcccccchhhHHHHHHHhhhhHHHHHhhhHHHhccccchh-HHHHHHHHHHH
Q 009409 229 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE-SVFYIFGLLGI 280 (535)
Q Consensus 229 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~-~~f~~~~~~~~ 280 (535)
.+-.++++|-+..-.......+-..+..+.|.++.+.+|-. ..|-+.|.+.+
T Consensus 28 t~~~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL 80 (203)
T PF01914_consen 28 TKGMSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIIL 80 (203)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 33445455544444444444444555556666677666643 24444444433
No 366
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=22.76 E-value=6.4e+02 Score=24.79 Aligned_cols=39 Identities=15% Similarity=0.163 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhhhhhhHhhhhhhhcccCCCccchhHHHH
Q 009409 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQS 156 (535)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~s 156 (535)
.+........+..-.....+....+++|.++.-.|.+..
T Consensus 225 vLl~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa 263 (368)
T COG0387 225 VLLIATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIA 263 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 333444445555556666777888999999877776544
No 367
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=22.69 E-value=6.6e+02 Score=23.77 Aligned_cols=62 Identities=16% Similarity=0.201 Sum_probs=28.9
Q ss_pred HHhhhcHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHhCCChhhHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 009409 330 KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (535)
Q Consensus 330 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 399 (535)
+++.|+|+.+..................|.| . +-...++++-+.+..+.+++.+.+ .+-||+
T Consensus 63 ~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv----n--~g~~leaSLGY~InPL~~VllG~l--flkErl 124 (293)
T COG2962 63 KQLLKQPKTLLMLALTALLIGLNWWLFIWAV----N--NGHVLEASLGYFINPLVNVLLGRL--FLKERL 124 (293)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHhheec----C--CCchhHHHhHHHHHHHHHHHHHHH--HHHhhc
Confidence 5677788766655544444333333333333 1 222334444444444444432222 355555
No 368
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=22.64 E-value=5.8e+02 Score=25.56 Aligned_cols=101 Identities=12% Similarity=0.080 Sum_probs=54.8
Q ss_pred hhh-hhcccCCCccchhHHHHHHHHHHHhhhccchhhhcccCCchhhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhh
Q 009409 137 IIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGI 215 (535)
Q Consensus 137 ~~~-~~~~~g~s~~~~~~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~ 215 (535)
.|. +.+..|++.++...+.+...+...++.++-.+-.-++|.|..+..+.....+...........+...+..-++.|+
T Consensus 15 ~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gi 94 (406)
T TIGR03173 15 VPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGL 94 (406)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 444 3345699988888888888888888888765333356777666655443222222221112233444444444444
Q ss_pred ccCCchhhHHHHhhhcccccchh
Q 009409 216 GEGVSPSAATDLIARSIPLEERS 238 (535)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~r~ 238 (535)
..-... .....+.+.+|+.-.|
T Consensus 95 i~illg-~~~~~l~~~iPp~v~G 116 (406)
T TIGR03173 95 FVILLA-PFFSKLVRFFPPVVTG 116 (406)
T ss_pred HHHHHH-HHHHHHHHHCCcHHHH
Confidence 332222 2344566777754433
No 369
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=22.60 E-value=1.3e+02 Score=17.72 Aligned_cols=20 Identities=15% Similarity=0.331 Sum_probs=13.6
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 009409 379 ILPPLASVLVTSIAAQFADN 398 (535)
Q Consensus 379 ~~~~~~~~~~~~~~g~l~dr 398 (535)
+.+.+.+++.+++.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 45666777777777777654
No 370
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.11 E-value=1.4e+02 Score=29.92 Aligned_cols=23 Identities=17% Similarity=0.122 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Q 009409 381 PPLASVLVTSIAAQFADNLIATG 403 (535)
Q Consensus 381 ~~~~~~~~~~~~g~l~dr~~~~~ 403 (535)
..+.+.+.+..+|.+-.|.|.|+
T Consensus 336 YAlTs~i~GY~~gs~Y~r~gG~~ 358 (593)
T KOG1277|consen 336 YALTSPINGYVSGSFYARLGGRR 358 (593)
T ss_pred HHhcccccccccceeeehhccHH
Confidence 33444445555555666777653
No 371
>PRK11715 inner membrane protein; Provisional
Probab=21.99 E-value=3.7e+02 Score=27.22 Aligned_cols=23 Identities=4% Similarity=-0.169 Sum_probs=14.2
Q ss_pred hhhHHHHhhhcccccchhhHHHH
Q 009409 221 PSAATDLIARSIPLEERSRAVSF 243 (535)
Q Consensus 221 ~~~~~~~~~~~~~~~~r~~~~~~ 243 (535)
......|+.......+||..++.
T Consensus 369 v~li~~Y~~~vl~~~k~g~~~~~ 391 (436)
T PRK11715 369 VLLIGFYLSAVLRSWKRGLLFAA 391 (436)
T ss_pred HHHHHHHHHHHHhcchHHHHHHH
Confidence 34455666666776777766654
No 372
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=20.95 E-value=4.5e+02 Score=27.49 Aligned_cols=36 Identities=31% Similarity=0.467 Sum_probs=17.7
Q ss_pred CccchhHHHHHHHHHHHhhhccchh----hhcccCCchhh
Q 009409 147 NSSVAGLVQSSFFWGYALSQLPGGW----LAKIFGGRKVL 182 (535)
Q Consensus 147 s~~~~~~~~s~~~~~~~~~~~~~g~----l~dr~g~r~~~ 182 (535)
++..-|.+.+...+.+++++.++|+ +...+|.|+..
T Consensus 291 ~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~ 330 (521)
T PF02990_consen 291 SPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGKKWK 330 (521)
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCcee
Confidence 3333344444444455555555554 44556665444
No 373
>PF12676 DUF3796: Protein of unknown function (DUF3796); InterPro: IPR024257 This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.
Probab=20.70 E-value=4.5e+02 Score=21.06 Aligned_cols=26 Identities=8% Similarity=-0.107 Sum_probs=10.9
Q ss_pred CcchhHHHHHHHHhhhhhhhHHHHHH
Q 009409 466 PEYASILLGITNTVGAVPGIVGVALT 491 (535)
Q Consensus 466 ~~~~g~~~g~~~~~~~lg~~igp~i~ 491 (535)
.++...+......+.-+...+...+.
T Consensus 52 ~~n~~kAa~~af~v~l~~~~ii~l~~ 77 (118)
T PF12676_consen 52 YENVRKAASRAFFVALILLFIILLIS 77 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444433333333333
No 374
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=20.69 E-value=7.2e+02 Score=23.48 Aligned_cols=56 Identities=13% Similarity=0.084 Sum_probs=32.9
Q ss_pred HHHHHHHhhhccCCchhhHHHHhhhcccccchhhHHHHHHHhhhhHHHHHhhhHHHh
Q 009409 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (535)
Q Consensus 206 l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 262 (535)
.-..|.+.|+-.-.+ ..+++++.-.||++++--..--...+.+++-++-|++|-.+
T Consensus 22 ~~~lr~~~g~~~vlf-~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFVLF-LPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHHHH-hccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788887765333 45678888888855443333333444455555556655444
No 375
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=20.55 E-value=2.9e+02 Score=18.77 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=22.6
Q ss_pred hHHHHHhhhHHHhccccchhHHHHHHHHHHHHHHHHhhhcccC
Q 009409 250 FGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEG 292 (535)
Q Consensus 250 ~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 292 (535)
+|.++|-+.+......+++....++..+.+++...+...++++
T Consensus 13 l~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 13 LGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3444444444333345667766666666666555555444443
No 376
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=20.43 E-value=3.7e+02 Score=27.25 Aligned_cols=6 Identities=33% Similarity=0.678 Sum_probs=2.6
Q ss_pred CCCCCC
Q 009409 101 SYWPPW 106 (535)
Q Consensus 101 ~~~~~~ 106 (535)
..|+..
T Consensus 387 ~~wP~~ 392 (588)
T KOG1307|consen 387 FDWPET 392 (588)
T ss_pred CCCccc
Confidence 345443
No 377
>PHA02902 putative IMV membrane protein; Provisional
Probab=20.42 E-value=1.7e+02 Score=20.25 Aligned_cols=25 Identities=8% Similarity=0.219 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHhhhhhccCCCC
Q 009409 504 SLFAPSIFFYLTGTIVWLAFASSKP 528 (535)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (535)
.|.+.+++.++.+++++..++|.|.
T Consensus 5 tfvi~~v~v~Ivclliya~YrR~kc 29 (70)
T PHA02902 5 TFVILAVIVIIFCLLIYAAYKRYKC 29 (70)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4566677777777777877776643
No 378
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=20.28 E-value=6e+02 Score=22.33 Aligned_cols=35 Identities=17% Similarity=0.042 Sum_probs=28.9
Q ss_pred CCChhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Q 009409 368 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (535)
Q Consensus 368 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~ 402 (535)
.-|+.+..+++..++++..+.....+....+.+++
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 45778888899999999998888888888887654
Done!