Query 009410
Match_columns 535
No_of_seqs 214 out of 1864
Neff 9.7
Searched_HMMs 46136
Date Thu Mar 28 12:46:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009410.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009410hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02942 dihydropyrimidinase 100.0 3E-65 6.6E-70 529.9 52.3 479 52-530 4-485 (486)
2 KOG2584 Dihydroorotase and rel 100.0 4.9E-64 1.1E-68 471.6 32.5 480 52-531 13-501 (522)
3 PRK13404 dihydropyrimidinase; 100.0 1.6E-57 3.4E-62 470.1 50.8 448 52-504 3-462 (477)
4 TIGR02033 D-hydantoinase D-hyd 100.0 6.4E-57 1.4E-61 468.7 50.7 448 55-503 1-454 (454)
5 PRK08323 phenylhydantoinase; V 100.0 1.1E-56 2.4E-61 467.1 51.4 448 54-506 2-455 (459)
6 cd01314 D-HYD D-hydantoinases 100.0 2.6E-56 5.7E-61 462.4 50.2 442 55-498 1-447 (447)
7 PLN02795 allantoinase 100.0 1.6E-55 3.6E-60 456.5 53.1 447 45-503 36-504 (505)
8 COG0044 PyrC Dihydroorotase an 100.0 7.5E-56 1.6E-60 443.5 46.2 422 54-494 2-428 (430)
9 PRK06189 allantoinase; Provisi 100.0 2.1E-54 4.6E-59 446.1 49.7 440 51-505 1-449 (451)
10 PRK08044 allantoinase; Provisi 100.0 3.5E-54 7.6E-59 442.3 49.0 436 51-502 1-449 (449)
11 cd01315 L-HYD_ALN L-Hydantoina 100.0 1.7E-53 3.6E-58 441.4 51.2 438 54-502 1-447 (447)
12 TIGR03178 allantoinase allanto 100.0 1.3E-53 2.8E-58 440.0 49.2 433 54-501 1-442 (443)
13 PRK07627 dihydroorotase; Provi 100.0 2.2E-53 4.8E-58 432.3 42.5 415 54-488 2-424 (425)
14 PRK07369 dihydroorotase; Provi 100.0 1.7E-52 3.7E-57 424.4 41.5 408 53-480 2-418 (418)
15 PRK09059 dihydroorotase; Valid 100.0 4.7E-52 1E-56 423.1 42.1 417 51-487 1-428 (429)
16 PRK09236 dihydroorotase; Revie 100.0 3.7E-51 8E-56 421.1 48.8 432 53-503 2-442 (444)
17 PRK07575 dihydroorotase; Provi 100.0 5.9E-51 1.3E-55 418.0 46.8 427 51-502 1-435 (438)
18 PRK09060 dihydroorotase; Valid 100.0 1.2E-50 2.6E-55 416.0 47.7 429 52-505 4-440 (444)
19 PRK02382 dihydroorotase; Provi 100.0 7.6E-51 1.6E-55 418.7 45.7 427 53-503 2-435 (443)
20 PRK09357 pyrC dihydroorotase; 100.0 1E-49 2.2E-54 409.9 44.7 415 54-488 2-423 (423)
21 PRK08417 dihydroorotase; Provi 100.0 4.8E-50 1E-54 404.6 40.5 379 73-487 1-386 (386)
22 TIGR00857 pyrC_multi dihydroor 100.0 3.9E-48 8.5E-53 394.7 44.8 403 68-488 3-411 (411)
23 PRK01211 dihydroorotase; Provi 100.0 2.3E-48 5.1E-53 391.1 37.9 398 57-503 3-405 (409)
24 PRK04250 dihydroorotase; Provi 100.0 3.2E-46 7E-51 376.2 42.5 390 59-500 3-397 (398)
25 PRK00369 pyrC dihydroorotase; 100.0 1E-43 2.2E-48 355.6 39.7 372 70-504 13-390 (392)
26 cd01318 DHOase_IIb Dihydroorot 100.0 7.3E-43 1.6E-47 348.1 36.6 355 100-482 1-361 (361)
27 cd01317 DHOase_IIa Dihydroorot 100.0 3.4E-42 7.4E-47 347.2 35.9 367 93-478 2-374 (374)
28 cd01302 Cyclic_amidohydrolases 100.0 3E-41 6.5E-46 334.6 34.7 329 101-478 1-337 (337)
29 PRK09061 D-glutamate deacylase 100.0 1.1E-40 2.4E-45 346.1 38.6 395 52-505 18-508 (509)
30 PRK06687 chlorohydrolase; Vali 100.0 2.6E-40 5.7E-45 339.4 33.1 379 55-495 2-418 (419)
31 PRK15493 5-methylthioadenosine 100.0 3.2E-39 6.9E-44 331.4 33.9 379 54-495 2-418 (435)
32 cd01297 D-aminoacylase D-amino 100.0 1.4E-38 3E-43 325.3 34.5 356 54-494 1-411 (415)
33 cd01298 ATZ_TRZ_like TRZ/ATZ f 100.0 1.1E-38 2.4E-43 328.4 33.2 372 55-492 1-411 (411)
34 PRK07228 N-ethylammeline chlor 100.0 7E-38 1.5E-42 324.2 36.4 379 54-495 2-422 (445)
35 cd01316 CAD_DHOase The eukaryo 100.0 7E-37 1.5E-41 301.3 36.3 337 101-498 2-344 (344)
36 PRK09045 N-ethylammeline chlor 100.0 2.3E-37 5E-42 319.5 34.0 378 52-495 6-423 (443)
37 PRK08204 hypothetical protein; 100.0 4.8E-37 1E-41 318.5 33.8 368 53-495 2-425 (449)
38 PRK08203 hydroxydechloroatrazi 100.0 6.7E-37 1.4E-41 317.0 34.4 375 55-495 4-432 (451)
39 PRK06380 metal-dependent hydro 100.0 1.5E-36 3.2E-41 311.8 36.2 373 54-495 2-408 (418)
40 PRK07203 putative chlorohydrol 100.0 2.3E-36 5E-41 312.0 34.7 375 55-495 2-423 (442)
41 PRK15446 phosphonate metabolis 100.0 4.4E-36 9.5E-41 301.8 34.4 358 53-488 2-382 (383)
42 TIGR03314 Se_ssnA putative sel 100.0 5.9E-36 1.3E-40 307.7 33.8 375 55-495 1-422 (441)
43 PRK08393 N-ethylammeline chlor 100.0 1.7E-35 3.6E-40 303.7 34.8 373 54-495 2-408 (424)
44 PRK06151 N-ethylammeline chlor 100.0 1.4E-35 3.1E-40 308.8 33.0 372 54-495 2-446 (488)
45 PRK09228 guanine deaminase; Pr 100.0 1.8E-35 4E-40 303.1 32.5 361 69-488 30-432 (433)
46 PRK06038 N-ethylammeline chlor 100.0 6.6E-35 1.4E-39 299.5 35.2 374 54-495 3-409 (430)
47 PRK12393 amidohydrolase; Provi 100.0 1.4E-34 3E-39 299.0 36.2 379 53-495 2-437 (457)
48 COG1574 Predicted metal-depend 100.0 3.1E-35 6.7E-40 299.8 26.7 369 51-488 3-534 (535)
49 COG1228 HutI Imidazolonepropio 100.0 6.5E-35 1.4E-39 291.4 27.4 344 53-490 10-405 (406)
50 PRK12394 putative metallo-depe 100.0 6.8E-34 1.5E-38 287.4 35.1 347 52-490 2-378 (379)
51 TIGR02967 guan_deamin guanine 100.0 2.3E-34 5E-39 294.1 30.8 355 69-482 5-401 (401)
52 TIGR02318 phosphono_phnM phosp 100.0 5.1E-34 1.1E-38 285.8 32.2 353 56-486 1-376 (376)
53 cd01303 GDEase Guanine deamina 100.0 7.8E-34 1.7E-38 291.2 32.0 356 69-482 25-429 (429)
54 cd01293 Bact_CD Bacterial cyto 100.0 7.8E-34 1.7E-38 291.1 29.3 350 57-485 2-398 (398)
55 PRK09356 imidazolonepropionase 100.0 2.5E-33 5.4E-38 287.3 32.4 346 51-487 1-406 (406)
56 PRK13206 ureC urease subunit a 100.0 2.5E-33 5.5E-38 284.1 31.0 354 52-494 70-470 (573)
57 PRK13207 ureC urease subunit a 100.0 5.4E-33 1.2E-37 282.6 32.3 352 52-496 66-467 (568)
58 PRK13308 ureC urease subunit a 100.0 6E-33 1.3E-37 279.9 32.3 344 52-488 67-459 (569)
59 cd00375 Urease_alpha Urease al 100.0 9.9E-33 2.1E-37 278.3 32.3 351 52-495 64-466 (567)
60 PRK07213 chlorohydrolase; Prov 100.0 1.2E-32 2.6E-37 277.7 33.0 342 55-484 2-375 (375)
61 PRK13985 ureB urease subunit b 100.0 5.4E-33 1.2E-37 279.0 30.0 344 52-488 64-458 (568)
62 PRK13309 ureC urease subunit a 100.0 2.3E-32 5E-37 278.8 33.6 356 52-496 67-471 (572)
63 TIGR02022 hutF formiminoglutam 100.0 7.4E-33 1.6E-37 285.7 30.3 369 55-495 4-440 (455)
64 PRK09229 N-formimino-L-glutama 100.0 7.2E-33 1.6E-37 286.6 28.9 366 54-492 4-437 (456)
65 COG1001 AdeC Adenine deaminase 100.0 9.8E-33 2.1E-37 274.7 26.9 330 52-494 23-366 (584)
66 PRK08418 chlorohydrolase; Prov 100.0 7.1E-33 1.5E-37 281.5 25.8 368 55-485 2-407 (408)
67 TIGR01975 isoAsp_dipep isoaspa 100.0 1.5E-31 3.1E-36 267.4 34.6 356 55-493 2-384 (389)
68 TIGR01792 urease_alph urease, 100.0 3.3E-32 7.2E-37 277.3 28.3 348 52-495 65-465 (567)
69 cd01313 Met_dep_hydrolase_E Me 100.0 7.7E-32 1.7E-36 275.6 30.1 349 65-483 4-418 (418)
70 PRK10657 isoaspartyl dipeptida 100.0 9.6E-31 2.1E-35 266.5 35.6 355 54-494 2-384 (388)
71 COG0402 SsnA Cytosine deaminas 100.0 3.9E-31 8.5E-36 270.9 32.9 374 54-492 3-414 (421)
72 PRK07572 cytosine deaminase; V 100.0 1.6E-31 3.6E-36 274.1 30.1 360 53-489 2-404 (426)
73 PRK14085 imidazolonepropionase 100.0 5.2E-31 1.1E-35 266.9 33.1 315 54-449 2-365 (382)
74 PRK05985 cytosine deaminase; P 100.0 4.8E-31 1E-35 268.4 32.8 349 53-489 2-391 (391)
75 PRK09230 cytosine deaminase; P 100.0 8.6E-31 1.9E-35 267.5 33.1 360 53-488 4-407 (426)
76 PRK10027 cryptic adenine deami 100.0 1.3E-30 2.9E-35 270.7 34.6 328 52-492 29-370 (588)
77 TIGR01178 ade adenine deaminas 100.0 1.4E-30 3.1E-35 270.7 34.0 324 54-492 1-342 (552)
78 cd01299 Met_dep_hydrolase_A Me 100.0 2.5E-31 5.4E-36 266.5 22.5 301 93-452 1-339 (342)
79 TIGR01224 hutI imidazoloneprop 100.0 1.7E-30 3.7E-35 263.8 28.8 323 69-484 2-377 (377)
80 cd01312 Met_dep_hydrolase_D Me 100.0 5.6E-31 1.2E-35 264.9 24.2 343 78-483 1-381 (381)
81 PRK09237 dihydroorotase; Provi 100.0 5.7E-30 1.2E-34 259.5 31.6 351 55-492 1-374 (380)
82 cd01296 Imidazolone-5PH Imidaz 100.0 3.5E-30 7.5E-35 261.1 27.9 318 73-482 1-371 (371)
83 PLN02303 urease 100.0 9.9E-30 2.2E-34 264.6 31.6 355 52-494 333-734 (837)
84 PRK07583 cytosine deaminase-li 100.0 1.5E-29 3.3E-34 260.2 31.5 358 52-488 10-424 (438)
85 cd01308 Isoaspartyl-dipeptidas 100.0 1.9E-28 4.1E-33 249.4 36.1 359 55-494 2-383 (387)
86 cd01294 DHOase Dihydroorotase 100.0 1.8E-29 4E-34 250.8 27.2 318 104-470 3-331 (335)
87 PRK06846 putative deaminase; V 100.0 4.7E-28 1E-32 247.5 31.1 350 54-488 5-406 (410)
88 cd01309 Met_dep_hydrolase_C Me 100.0 5.4E-28 1.2E-32 242.0 30.0 316 77-486 1-359 (359)
89 TIGR00221 nagA N-acetylglucosa 100.0 3.5E-28 7.6E-33 242.3 25.5 354 51-483 1-380 (380)
90 KOG3968 Atrazine chlorohydrola 100.0 8.7E-29 1.9E-33 235.2 18.8 360 69-487 26-438 (439)
91 COG1820 NagA N-acetylglucosami 100.0 3E-28 6.6E-33 233.3 21.7 351 55-487 2-380 (380)
92 cd00854 NagA N-acetylglucosami 100.0 1.3E-27 2.9E-32 240.5 27.6 349 55-482 1-374 (374)
93 cd01304 FMDH_A Formylmethanofu 100.0 2.5E-26 5.4E-31 231.8 35.6 398 57-505 1-514 (541)
94 PRK11170 nagA N-acetylglucosam 100.0 2.7E-27 5.9E-32 236.7 27.9 352 55-487 2-381 (382)
95 cd01300 YtcJ_like YtcJ_like me 100.0 1.1E-26 2.4E-31 242.9 24.0 186 210-443 290-479 (479)
96 TIGR03121 one_C_dehyd_A formyl 100.0 2.3E-25 5E-30 226.0 32.6 396 55-505 2-516 (556)
97 cd01307 Met_dep_hydrolase_B Me 100.0 7.1E-26 1.5E-30 225.7 28.3 295 72-448 1-317 (338)
98 COG3964 Predicted amidohydrola 99.9 4.8E-26 1E-30 206.1 23.8 311 51-447 2-339 (386)
99 COG3454 Metal-dependent hydrol 99.9 1.4E-25 3.1E-30 205.5 26.5 344 56-486 2-377 (377)
100 TIGR00856 pyrC_dimer dihydroor 99.9 1.9E-25 4E-30 220.3 28.5 324 102-475 2-340 (341)
101 PRK05451 dihydroorotase; Provi 99.9 3.5E-25 7.5E-30 219.7 27.3 324 102-475 5-343 (345)
102 TIGR03583 EF_0837 probable ami 99.9 5.6E-24 1.2E-28 214.5 31.7 334 54-485 2-364 (365)
103 cd01295 AdeC Adenine deaminase 99.9 6.5E-24 1.4E-28 217.3 29.6 282 97-489 1-293 (422)
104 COG0804 UreC Urea amidohydrola 99.9 5.1E-23 1.1E-27 193.2 24.4 344 52-488 66-458 (568)
105 PLN02599 dihydroorotase 99.9 1.3E-21 2.8E-26 193.1 27.9 291 102-432 23-328 (364)
106 COG3653 N-acyl-D-aspartate/D-g 99.9 8.5E-21 1.9E-25 179.9 27.7 99 406-509 473-574 (579)
107 cd01306 PhnM PhnM is believed 99.9 5E-20 1.1E-24 178.8 26.7 274 104-482 1-325 (325)
108 PF13147 Amidohydro_4: Amidohy 99.9 1E-20 2.2E-25 185.9 22.0 299 97-442 1-304 (304)
109 PF01979 Amidohydro_1: Amidohy 99.8 7.5E-20 1.6E-24 182.9 18.6 289 102-445 1-333 (333)
110 COG1229 FwdA Formylmethanofura 99.8 2.5E-17 5.3E-22 155.5 21.7 408 51-499 1-521 (575)
111 PF07969 Amidohydro_3: Amidohy 99.8 5.4E-18 1.2E-22 174.1 18.9 250 133-443 138-404 (404)
112 KOG3892 N-acetyl-glucosamine-6 99.7 4E-17 8.8E-22 146.0 15.2 72 392-488 334-405 (407)
113 cd01305 archeal_chlorohydrolas 99.7 2.7E-16 5.9E-21 151.2 15.1 235 102-423 1-263 (263)
114 PF13594 Amidohydro_5: Amidohy 99.6 2.8E-15 6.1E-20 111.4 7.8 67 73-142 1-68 (68)
115 PRK06886 hypothetical protein; 99.5 1.5E-12 3.2E-17 127.2 23.4 241 130-427 74-328 (329)
116 cd01292 metallo-dependent_hydr 99.5 3.6E-13 7.9E-18 130.3 18.1 249 107-423 1-275 (275)
117 COG0418 PyrC Dihydroorotase [N 99.1 2.8E-08 6.1E-13 91.7 21.7 286 103-428 6-305 (344)
118 KOG2902 Dihydroorotase [Nucleo 99.0 8.1E-08 1.8E-12 85.4 19.7 286 103-428 6-302 (344)
119 TIGR01430 aden_deam adenosine 99.0 9.2E-08 2E-12 94.9 22.5 144 211-427 168-313 (324)
120 cd01310 TatD_DNAse TatD like p 99.0 5.2E-08 1.1E-12 93.1 19.8 243 107-425 1-251 (251)
121 cd01320 ADA Adenosine deaminas 98.9 2.2E-07 4.7E-12 92.4 22.5 144 212-427 170-314 (325)
122 TIGR00010 hydrolase, TatD fami 98.9 1.1E-07 2.4E-12 91.0 19.1 244 107-426 1-252 (252)
123 cd00530 PTE Phosphotriesterase 98.8 8.8E-07 1.9E-11 86.7 22.3 263 106-424 1-293 (293)
124 PRK09358 adenosine deaminase; 98.8 1.3E-06 2.9E-11 87.3 22.0 144 211-426 178-322 (340)
125 PRK10812 putative DNAse; Provi 98.7 2E-06 4.3E-11 82.1 20.7 249 107-427 3-257 (265)
126 PRK09875 putative hydrolase; P 98.7 4.9E-06 1.1E-10 80.0 22.2 260 106-425 7-292 (292)
127 COG0084 TatD Mg-dependent DNas 98.7 3.8E-06 8.3E-11 78.8 20.6 243 107-426 3-256 (256)
128 PRK10425 DNase TatD; Provision 98.5 5.4E-06 1.2E-10 78.8 15.9 244 107-426 1-258 (258)
129 PF01026 TatD_DNase: TatD rela 98.5 8.3E-06 1.8E-10 77.9 16.8 244 108-425 1-255 (255)
130 PRK11449 putative deoxyribonuc 98.5 3.7E-05 8E-10 73.2 21.0 248 104-426 2-258 (258)
131 PF02126 PTE: Phosphotriestera 98.1 4.4E-05 9.6E-10 74.1 13.4 268 106-424 7-307 (308)
132 COG1099 Predicted metal-depend 98.1 0.00041 8.9E-09 61.8 16.9 234 107-426 2-253 (254)
133 COG1735 Php Predicted metal-de 98.0 0.00054 1.2E-08 64.3 18.3 242 131-426 54-314 (316)
134 cd01321 ADGF Adenosine deamina 97.7 0.0085 1.8E-07 59.6 21.8 148 212-426 176-329 (345)
135 PTZ00124 adenosine deaminase; 97.7 0.0041 9E-08 62.0 18.5 140 215-426 206-349 (362)
136 PF12890 DHOase: Dihydro-orota 97.7 0.00011 2.3E-09 59.9 5.8 80 205-293 56-139 (142)
137 PF04909 Amidohydro_2: Amidohy 97.5 0.0071 1.5E-07 58.2 17.9 186 181-426 83-273 (273)
138 cd00443 ADA_AMPD Adenosine/AMP 97.4 0.027 5.9E-07 55.2 19.9 141 213-426 151-293 (305)
139 cd01311 PDC_hydrolase 2-pyrone 97.1 0.075 1.6E-06 51.0 19.8 123 106-237 1-132 (263)
140 PF00962 A_deaminase: Adenosin 97.1 0.0094 2E-07 59.4 13.8 142 213-426 178-320 (331)
141 PF00449 Urease_alpha: Urease 96.8 0.0034 7.3E-08 49.7 5.9 36 52-87 65-100 (121)
142 COG2159 Predicted metal-depend 96.8 0.16 3.6E-06 49.3 18.5 176 182-427 112-291 (293)
143 COG1816 Add Adenosine deaminas 96.7 0.021 4.5E-07 56.0 11.7 144 211-426 181-325 (345)
144 PF07908 D-aminoacyl_C: D-amin 96.3 0.0047 1E-07 41.7 3.1 30 474-504 19-48 (48)
145 TIGR01431 adm_rel adenosine de 95.9 0.96 2.1E-05 47.1 19.4 53 298-371 363-415 (479)
146 KOG1097 Adenine deaminase/aden 95.5 0.59 1.3E-05 46.4 15.0 106 213-370 225-331 (399)
147 COG3618 Predicted metal-depend 93.9 6.1 0.00013 37.5 21.0 25 214-238 123-147 (279)
148 PRK08392 hypothetical protein; 93.5 6.2 0.00013 36.4 18.4 32 108-143 1-32 (215)
149 PRK08609 hypothetical protein; 92.4 8.4 0.00018 41.3 17.6 37 103-143 324-367 (570)
150 COG4464 CapC Capsular polysacc 91.2 3.2 7E-05 37.4 10.6 39 107-145 1-40 (254)
151 COG1831 Predicted metal-depend 90.5 15 0.00032 34.6 14.5 139 213-427 143-283 (285)
152 PRK07945 hypothetical protein; 86.4 37 0.00079 33.8 18.2 40 100-143 89-129 (335)
153 PRK06361 hypothetical protein; 86.1 9.7 0.00021 35.0 11.0 95 287-426 116-210 (212)
154 KOG3020 TatD-related DNase [Re 85.6 36 0.00078 32.9 18.8 178 96-310 7-199 (296)
155 cd01319 AMPD AMP deaminase (AM 82.9 7.6 0.00016 40.5 9.3 91 298-427 363-453 (496)
156 TIGR01429 AMP_deaminase AMP de 82.6 14 0.0003 39.5 11.2 91 298-427 475-565 (611)
157 COG0826 Collagenase and relate 81.1 21 0.00045 35.6 11.4 113 184-309 15-139 (347)
158 PRK07328 histidinol-phosphatas 80.6 55 0.0012 31.3 17.9 34 107-143 3-36 (269)
159 PLN03055 AMP deaminase; Provis 80.2 9.8 0.00021 40.4 9.1 101 288-427 442-543 (602)
160 PRK09248 putative hydrolase; V 79.1 57 0.0012 30.7 17.2 34 107-143 4-37 (246)
161 PRK13352 thiamine biosynthesis 78.0 82 0.0018 31.8 16.2 33 128-162 80-112 (431)
162 PLN02768 AMP deaminase 72.8 15 0.00032 40.3 8.2 91 298-427 686-776 (835)
163 PTZ00310 AMP deaminase; Provis 71.2 13 0.00027 43.5 7.6 52 298-371 515-567 (1453)
164 PRK01060 endonuclease IV; Prov 70.8 72 0.0016 30.6 12.1 91 185-292 15-111 (281)
165 TIGR01496 DHPS dihydropteroate 70.4 62 0.0014 30.7 11.2 64 182-246 23-93 (257)
166 PRK12738 kbaY tagatose-bisphos 69.9 1.1E+02 0.0023 29.7 12.6 105 181-287 27-132 (286)
167 PRK12330 oxaloacetate decarbox 69.5 1.2E+02 0.0026 31.9 13.7 125 127-255 99-228 (499)
168 PRK07709 fructose-bisphosphate 68.5 1.2E+02 0.0025 29.4 12.6 65 185-253 158-227 (285)
169 PRK14042 pyruvate carboxylase 68.1 1.3E+02 0.0029 32.4 14.0 124 127-254 98-224 (596)
170 PRK12581 oxaloacetate decarbox 67.8 1.6E+02 0.0035 30.7 14.1 125 127-255 107-234 (468)
171 PRK12737 gatY tagatose-bisphos 67.7 1.2E+02 0.0026 29.3 12.4 105 181-287 27-132 (284)
172 PRK09195 gatY tagatose-bisphos 67.5 1.1E+02 0.0024 29.5 12.2 105 181-287 27-132 (284)
173 PRK12738 kbaY tagatose-bisphos 67.4 1.2E+02 0.0026 29.4 12.3 65 185-253 157-226 (286)
174 COG5016 Pyruvate/oxaloacetate 67.4 1.4E+02 0.003 30.2 12.6 124 127-255 100-227 (472)
175 TIGR00190 thiC thiamine biosyn 66.4 1.5E+02 0.0033 29.9 16.8 33 128-162 80-112 (423)
176 TIGR01858 tag_bisphos_ald clas 66.0 1.3E+02 0.0028 29.0 12.5 105 181-287 25-130 (282)
177 PRK06801 hypothetical protein; 65.5 1.3E+02 0.0029 29.0 12.4 104 181-286 27-131 (286)
178 PTZ00310 AMP deaminase; Provis 65.2 26 0.00057 41.1 8.5 101 288-427 1135-1236(1453)
179 PRK09195 gatY tagatose-bisphos 64.8 1.2E+02 0.0027 29.2 11.9 65 185-253 157-226 (284)
180 cd00947 TBP_aldolase_IIB Tagat 63.4 1.4E+02 0.0031 28.6 12.2 65 185-253 150-220 (276)
181 PRK14042 pyruvate carboxylase 62.9 2.3E+02 0.0049 30.7 18.6 130 121-255 22-170 (596)
182 PRK00912 ribonuclease P protei 62.1 23 0.0005 33.2 6.4 69 351-437 159-228 (237)
183 PRK12737 gatY tagatose-bisphos 60.2 1.7E+02 0.0036 28.3 12.2 65 185-253 157-226 (284)
184 COG0191 Fba Fructose/tagatose 59.1 1.7E+02 0.0037 28.2 11.4 107 181-288 27-134 (286)
185 TIGR01858 tag_bisphos_ald clas 58.6 1.8E+02 0.0039 28.1 11.9 65 185-253 155-224 (282)
186 smart00518 AP2Ec AP endonuclea 58.2 1.7E+02 0.0037 27.8 12.4 90 186-292 14-106 (273)
187 PRK08610 fructose-bisphosphate 58.0 1.8E+02 0.004 28.1 12.4 65 185-253 158-227 (286)
188 PRK07998 gatY putative fructos 58.0 1.8E+02 0.0038 28.1 11.6 104 181-286 27-131 (283)
189 PRK12331 oxaloacetate decarbox 56.9 2.5E+02 0.0054 29.2 14.2 124 128-255 99-225 (448)
190 PF03932 CutC: CutC family; I 54.7 1.7E+02 0.0037 26.6 10.5 82 194-278 83-166 (201)
191 cd00408 DHDPS-like Dihydrodipi 54.4 2E+02 0.0044 27.5 12.4 120 185-305 21-149 (281)
192 cd00950 DHDPS Dihydrodipicolin 54.3 1.9E+02 0.0042 27.7 11.7 120 185-305 24-152 (284)
193 PRK08185 hypothetical protein; 54.2 2.1E+02 0.0046 27.6 12.2 105 181-287 22-126 (283)
194 PRK12857 fructose-1,6-bisphosp 54.0 2.1E+02 0.0046 27.6 12.6 105 181-287 27-132 (284)
195 PRK14041 oxaloacetate decarbox 53.4 2.7E+02 0.0059 29.1 12.9 124 128-255 98-224 (467)
196 PRK07998 gatY putative fructos 53.0 1.8E+02 0.0039 28.1 10.7 66 185-254 155-224 (283)
197 COG1387 HIS2 Histidinol phosph 52.9 2E+02 0.0043 26.9 17.2 33 107-143 2-34 (237)
198 PRK06740 histidinol-phosphatas 51.6 2.6E+02 0.0055 27.8 15.6 19 351-369 276-294 (331)
199 cd00947 TBP_aldolase_IIB Tagat 51.3 2.3E+02 0.005 27.2 12.5 105 181-287 22-127 (276)
200 COG5016 Pyruvate/oxaloacetate 50.4 2.9E+02 0.0063 28.0 14.1 180 123-311 26-228 (472)
201 cd00952 CHBPH_aldolase Trans-o 50.3 2.6E+02 0.0055 27.4 12.5 118 186-305 33-161 (309)
202 PTZ00372 endonuclease 4-like p 49.9 3E+02 0.0066 28.2 13.7 121 153-293 115-241 (413)
203 PRK05835 fructose-bisphosphate 49.2 2.7E+02 0.0057 27.3 12.1 51 185-238 157-214 (307)
204 COG2089 SpsE Sialic acid synth 49.0 2.5E+02 0.0054 27.6 10.8 28 212-239 87-114 (347)
205 PRK07329 hypothetical protein; 48.4 2.4E+02 0.0052 26.5 12.9 20 351-370 200-220 (246)
206 PRK03170 dihydrodipicolinate s 47.7 2.7E+02 0.0058 26.9 12.4 119 186-305 26-153 (292)
207 PRK06806 fructose-bisphosphate 45.9 2.9E+02 0.0062 26.7 12.3 110 181-292 27-139 (281)
208 cd00950 DHDPS Dihydrodipicolin 45.7 2.8E+02 0.0061 26.6 12.0 113 120-235 16-133 (284)
209 PF15581 Imm35: Immunity prote 45.4 98 0.0021 23.6 5.9 49 404-485 43-91 (93)
210 PF04273 DUF442: Putative phos 44.9 1.7E+02 0.0036 23.7 8.0 47 190-239 51-97 (110)
211 PRK12857 fructose-1,6-bisphosp 44.6 3E+02 0.0065 26.6 12.1 65 185-253 157-226 (284)
212 cd00408 DHDPS-like Dihydrodipi 44.4 2.9E+02 0.0063 26.4 12.0 111 120-235 13-130 (281)
213 TIGR00167 cbbA ketose-bisphosp 44.0 3.1E+02 0.0067 26.6 12.4 105 181-287 27-135 (288)
214 PRK09282 pyruvate carboxylase 43.9 4.2E+02 0.0092 28.7 13.0 161 121-285 92-255 (592)
215 PF01116 F_bP_aldolase: Fructo 42.5 1.3E+02 0.0029 29.0 8.3 106 181-288 26-132 (287)
216 PF07172 GRP: Glycine rich pro 41.7 20 0.00043 28.2 2.0 7 5-11 1-7 (95)
217 PF01964 ThiC: ThiC family; I 41.4 4E+02 0.0086 27.1 11.6 144 129-290 80-262 (420)
218 PF00701 DHDPS: Dihydrodipicol 41.4 3.3E+02 0.0072 26.2 13.1 114 120-236 17-135 (289)
219 TIGR00167 cbbA ketose-bisphosp 41.3 3.4E+02 0.0074 26.3 11.5 65 185-253 160-230 (288)
220 PF02811 PHP: PHP domain; Int 41.1 23 0.00051 30.9 2.7 33 108-143 1-34 (175)
221 PRK10657 isoaspartyl dipeptida 40.2 3.6E+02 0.0077 27.2 11.6 86 257-366 161-250 (388)
222 PRK15446 phosphonate metabolis 39.5 1.2E+02 0.0026 30.8 7.8 43 211-257 210-253 (383)
223 TIGR00674 dapA dihydrodipicoli 39.1 3.6E+02 0.0078 25.9 12.2 121 185-306 22-151 (285)
224 TIGR00674 dapA dihydrodipicoli 39.0 3.6E+02 0.0078 25.9 12.0 110 120-235 14-131 (285)
225 TIGR00587 nfo apurinic endonuc 38.9 3.5E+02 0.0077 25.8 11.2 93 184-293 13-111 (274)
226 PRK06015 keto-hydroxyglutarate 38.5 2.3E+02 0.005 25.8 8.6 97 123-241 14-110 (201)
227 PRK07084 fructose-bisphosphate 38.3 4E+02 0.0087 26.2 12.0 105 181-287 33-143 (321)
228 PF01081 Aldolase: KDPG and KH 37.9 3.1E+02 0.0067 24.8 9.9 101 122-244 17-117 (196)
229 cd00959 DeoC 2-deoxyribose-5-p 37.3 3.2E+02 0.0069 24.8 10.7 101 121-233 13-121 (203)
230 PRK07084 fructose-bisphosphate 37.3 4.2E+02 0.009 26.1 11.3 51 185-237 166-226 (321)
231 PRK05835 fructose-bisphosphate 36.6 4.2E+02 0.0091 25.9 12.4 105 181-287 26-132 (307)
232 KOG2550 IMP dehydrogenase/GMP 36.6 4.1E+02 0.0088 27.1 10.3 26 209-234 185-210 (503)
233 PRK03170 dihydrodipicolinate s 35.9 4.1E+02 0.0088 25.6 11.9 110 120-235 17-134 (292)
234 cd00952 CHBPH_aldolase Trans-o 35.7 4.3E+02 0.0093 25.8 12.6 113 120-234 24-141 (309)
235 TIGR00683 nanA N-acetylneurami 35.6 4.2E+02 0.009 25.6 12.0 119 186-305 25-154 (290)
236 COG0329 DapA Dihydrodipicolina 35.2 4.3E+02 0.0094 25.7 12.3 122 184-305 26-156 (299)
237 TIGR01182 eda Entner-Doudoroff 35.2 2.8E+02 0.0061 25.3 8.7 97 123-241 18-114 (204)
238 PRK07315 fructose-bisphosphate 34.9 4.3E+02 0.0094 25.6 11.2 105 181-287 27-134 (293)
239 PRK05301 pyrroloquinoline quin 34.0 5E+02 0.011 26.1 11.5 42 269-310 140-185 (378)
240 cd00453 FTBP_aldolase_II Fruct 33.9 4.8E+02 0.01 25.9 11.0 70 217-287 74-156 (340)
241 PF01261 AP_endonuc_2: Xylose 33.4 1.5E+02 0.0032 26.5 6.9 103 190-317 2-135 (213)
242 PRK08610 fructose-bisphosphate 32.5 4.7E+02 0.01 25.3 12.1 106 181-287 27-135 (286)
243 TIGR02109 PQQ_syn_pqqE coenzym 32.3 5.2E+02 0.011 25.7 11.3 101 208-309 62-175 (358)
244 TIGR01235 pyruv_carbox pyruvat 32.0 8.2E+02 0.018 29.0 13.7 108 128-238 628-742 (1143)
245 TIGR01856 hisJ_fam histidinol 31.1 4.5E+02 0.0098 24.7 18.4 33 108-143 1-33 (253)
246 cd00019 AP2Ec AP endonuclease 31.0 4.7E+02 0.01 24.8 13.3 91 187-293 14-108 (279)
247 PRK09856 fructoselysine 3-epim 30.6 4.7E+02 0.01 24.7 13.7 118 185-315 16-150 (275)
248 PRK07535 methyltetrahydrofolat 30.5 4.8E+02 0.01 24.8 14.4 120 185-315 28-162 (261)
249 PF07287 DUF1446: Protein of u 30.2 3.7E+02 0.0079 27.1 9.3 111 214-366 57-167 (362)
250 TIGR01108 oadA oxaloacetate de 30.1 7.4E+02 0.016 26.8 13.5 156 127-286 93-251 (582)
251 cd00953 KDG_aldolase KDG (2-ke 29.5 5.1E+02 0.011 24.8 13.4 108 120-235 15-128 (279)
252 PF01791 DeoC: DeoC/LacD famil 29.2 4.7E+02 0.01 24.3 11.3 50 185-235 79-132 (236)
253 TIGR03586 PseI pseudaminic aci 29.2 5.5E+02 0.012 25.4 10.3 90 212-312 74-166 (327)
254 PLN02417 dihydrodipicolinate s 29.2 5.2E+02 0.011 24.8 12.9 111 120-234 17-131 (280)
255 TIGR03249 KdgD 5-dehydro-4-deo 28.9 5.4E+02 0.012 24.9 14.2 119 186-305 30-153 (296)
256 cd00951 KDGDH 5-dehydro-4-deox 28.8 5.4E+02 0.012 24.8 12.7 116 188-305 27-148 (289)
257 PRK14040 oxaloacetate decarbox 28.7 7.8E+02 0.017 26.7 13.9 123 128-254 100-225 (593)
258 cd00953 KDG_aldolase KDG (2-ke 28.6 5.3E+02 0.012 24.7 14.2 118 187-306 25-148 (279)
259 PRK09196 fructose-1,6-bisphosp 28.5 6.1E+02 0.013 25.3 12.6 105 181-287 27-140 (347)
260 PF14871 GHL6: Hypothetical gl 28.4 1.9E+02 0.0041 24.2 6.0 47 190-236 7-65 (132)
261 PF03102 NeuB: NeuB family; I 28.4 2.9E+02 0.0063 25.9 7.8 70 211-291 52-121 (241)
262 PLN02858 fructose-bisphosphate 28.3 5.5E+02 0.012 31.2 11.8 105 181-287 1123-1227(1378)
263 COG2108 Uncharacterized conser 28.3 5.9E+02 0.013 25.1 11.8 125 70-202 53-198 (353)
264 TIGR02318 phosphono_phnM phosp 28.3 2E+02 0.0043 29.1 7.3 39 213-255 207-246 (376)
265 TIGR03849 arch_ComA phosphosul 27.9 5.1E+02 0.011 24.3 10.6 93 196-315 24-121 (237)
266 COG4939 Major membrane immunog 27.9 1.8E+02 0.004 23.9 5.4 23 64-86 42-65 (147)
267 PRK14040 oxaloacetate decarbox 27.5 8.2E+02 0.018 26.5 20.1 129 121-255 23-171 (593)
268 PF10566 Glyco_hydro_97: Glyco 27.3 3.6E+02 0.0078 25.9 8.3 110 122-237 29-159 (273)
269 COG0329 DapA Dihydrodipicolina 27.2 5.9E+02 0.013 24.8 13.2 112 120-235 20-137 (299)
270 TIGR02313 HpaI-NOT-DapA 2,4-di 27.0 5.8E+02 0.013 24.7 12.2 112 120-234 16-133 (294)
271 cd08205 RuBisCO_IV_RLP Ribulos 27.0 5.6E+02 0.012 25.8 10.1 109 121-238 142-257 (367)
272 COG3142 CutC Uncharacterized p 26.7 5.2E+02 0.011 24.0 11.2 110 193-309 83-195 (241)
273 PF08057 Ery_res_leader2: Eryt 26.5 9.8 0.00021 17.6 -1.1 10 1-10 1-10 (14)
274 PF12690 BsuPI: Intracellular 26.3 49 0.0011 25.1 1.9 14 434-447 21-34 (82)
275 PF00701 DHDPS: Dihydrodipicol 26.1 5.9E+02 0.013 24.4 11.7 119 186-305 26-153 (289)
276 PRK15452 putative protease; Pr 26.0 3.9E+02 0.0085 27.8 9.0 50 185-235 13-66 (443)
277 PRK15447 putative protease; Pr 25.5 6.3E+02 0.014 24.6 12.2 50 184-235 16-68 (301)
278 COG0800 Eda 2-keto-3-deoxy-6-p 25.3 4.3E+02 0.0093 24.2 8.0 98 123-242 23-120 (211)
279 COG1060 ThiH Thiamine biosynth 25.2 7.2E+02 0.016 25.1 11.8 120 121-241 89-230 (370)
280 PRK07709 fructose-bisphosphate 25.2 6.3E+02 0.014 24.4 12.9 105 181-287 27-135 (285)
281 cd00951 KDGDH 5-dehydro-4-deox 25.1 6.2E+02 0.014 24.4 12.3 110 120-235 16-132 (289)
282 cd07937 DRE_TIM_PC_TC_5S Pyruv 25.0 6.1E+02 0.013 24.2 13.3 182 121-306 87-271 (275)
283 cd00954 NAL N-Acetylneuraminic 24.9 6.3E+02 0.014 24.3 12.7 113 120-234 16-134 (288)
284 PRK03620 5-dehydro-4-deoxygluc 24.8 6.5E+02 0.014 24.5 11.7 113 120-235 23-139 (303)
285 TIGR00284 dihydropteroate synt 24.4 8.6E+02 0.019 25.7 13.1 117 184-316 167-289 (499)
286 COG2131 ComEB Deoxycytidylate 23.9 1.5E+02 0.0033 25.9 4.6 21 69-89 29-49 (164)
287 TIGR03249 KdgD 5-dehydro-4-deo 23.8 6.7E+02 0.015 24.2 11.9 109 120-234 21-136 (296)
288 PF07071 DUF1341: Protein of u 23.6 5E+02 0.011 23.6 7.8 40 189-231 141-180 (218)
289 PRK08227 autoinducer 2 aldolas 23.4 6.6E+02 0.014 24.0 15.1 80 187-291 99-179 (264)
290 PRK03620 5-dehydro-4-deoxygluc 23.0 7.1E+02 0.015 24.2 14.3 116 188-304 34-154 (303)
291 PRK12999 pyruvate carboxylase; 22.8 1.3E+03 0.029 27.4 14.0 181 123-306 624-813 (1146)
292 PRK04147 N-acetylneuraminate l 22.7 7E+02 0.015 24.1 12.9 110 120-235 19-137 (293)
293 TIGR03581 EF_0839 conserved hy 22.7 5.8E+02 0.012 23.5 8.1 71 190-293 142-212 (236)
294 COG1242 Predicted Fe-S oxidore 22.3 7.1E+02 0.015 24.0 12.1 22 214-235 167-188 (312)
295 TIGR03326 rubisco_III ribulose 22.2 8.6E+02 0.019 25.0 11.1 112 122-239 157-275 (412)
296 TIGR01859 fruc_bis_ald_ fructo 22.2 7.1E+02 0.015 24.0 9.9 104 128-234 87-206 (282)
297 PRK04208 rbcL ribulose bisopho 22.0 9.3E+02 0.02 25.2 11.1 112 122-239 173-292 (468)
298 COG2355 Zn-dependent dipeptida 21.7 7.7E+02 0.017 24.2 10.5 63 352-425 244-308 (313)
299 COG3065 Slp Starvation-inducib 21.7 4.1E+02 0.0089 23.5 6.7 14 99-112 94-109 (191)
300 PRK04147 N-acetylneuraminate l 21.4 7.4E+02 0.016 23.9 12.1 118 187-305 29-156 (293)
301 smart00481 POLIIIAc DNA polyme 21.2 1E+02 0.0022 21.9 2.8 32 109-143 1-33 (67)
302 cd01733 LSm10 The eukaryotic S 21.1 2E+02 0.0044 21.5 4.4 32 52-83 42-75 (78)
303 COG1038 PycA Pyruvate carboxyl 21.1 2.4E+02 0.0053 31.3 6.3 129 214-374 16-148 (1149)
304 PF09890 DUF2117: Uncharacteri 20.9 1.3E+02 0.0028 27.5 3.8 60 53-112 102-164 (215)
305 TIGR03569 NeuB_NnaB N-acetylne 20.8 4.7E+02 0.01 25.9 8.0 87 212-309 73-161 (329)
306 PF04457 DUF504: Protein of un 20.8 2.2E+02 0.0048 19.8 4.1 20 462-487 35-55 (56)
307 PLN02858 fructose-bisphosphate 20.4 9E+02 0.019 29.5 11.6 69 185-254 1252-1326(1378)
308 PF11068 YlqD: YlqD protein; 20.3 85 0.0018 26.3 2.3 19 65-83 109-130 (131)
309 TIGR02313 HpaI-NOT-DapA 2,4-di 20.2 7.9E+02 0.017 23.7 14.9 112 194-305 32-153 (294)
310 COG2108 Uncharacterized conser 20.1 7.5E+02 0.016 24.4 8.8 92 194-289 76-170 (353)
311 PRK08195 4-hyroxy-2-oxovalerat 20.1 8.6E+02 0.019 24.1 14.0 102 131-238 94-199 (337)
312 PF06115 DUF956: Domain of unk 20.1 1.3E+02 0.0029 24.5 3.2 70 418-502 13-82 (118)
313 TIGR01521 FruBisAldo_II_B fruc 20.0 8.8E+02 0.019 24.2 12.4 105 181-287 25-138 (347)
No 1
>PLN02942 dihydropyrimidinase
Probab=100.00 E-value=3e-65 Score=529.91 Aligned_cols=479 Identities=85% Similarity=1.330 Sum_probs=418.4
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHH
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~ 131 (535)
+.+++|+|++|++++....++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+..+....+++.++.
T Consensus 4 ~~~lli~~~~v~~~~~~~~~~i~I~~g~I~~i~~~~~~~~~~~~iD~~g~~v~PG~ID~H~H~~~~~~~~~~~ed~~s~s 83 (486)
T PLN02942 4 STKILIKGGTVVNAHHQELADVYVEDGIIVAVAPNLKVPDDVRVIDATGKFVMPGGIDPHTHLAMPFMGTETIDDFFSGQ 83 (486)
T ss_pred CCcEEEECcEEEcCCCCeEeEEEEECCEEEEEcCCCCCCCCCeEEECCCCEEecCEeeeeeccCcccCCCcccchHHHHH
Confidence 56799999999997766778999999999999876433335789999999999999999999988744456788999999
Q ss_pred HHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCc
Q 009410 132 AAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (535)
++++.+||||+.||..+......+.++.......+..++++++.+......+...++..+.+..|+..+|+++.+.+...
T Consensus 84 ~aAl~gGvTTv~D~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~e~~~l~~~~gv~~~k~~~~~~~~~~ 163 (486)
T PLN02942 84 AAALAGGTTMHIDFVIPVNGNLLAGYEAYEKKAEKSCMDYGFHMAITKWDDTVSRDMETLVKEKGINSFKFFMAYKGSLM 163 (486)
T ss_pred HHHHcCCCeEEEeCCCCCCCCHHHHHHHHHHHHhhcCCCEEEEEEecCCcHhHHHHHHHHHHhCCCceEEEEEecCCCCC
Confidence 99999999999999766544456666666666556667777776554433333456666654568888999988777667
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
.+++.+.+.++.+++.|.++++|+++........+.+...|..++..|...+|..+|..++.+++.+++..+.++|+.|+
T Consensus 164 ~~~~~l~~~~~~a~~~~~~v~~HaE~~~~~~~~~~~~~~~G~~~~~~~~~~rP~~~E~~av~~~~~la~~~g~~~~i~H~ 243 (486)
T PLN02942 164 VTDELLLEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATARAIRLAKFVNTPLYVVHV 243 (486)
T ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHcCCCChhhhhccCCchHHHHHHHHHHHHHHHhCCCEEEEEC
Confidence 78999999999999999999999998877777777777789888888888899999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCC
Q 009410 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (535)
Q Consensus 292 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~ 371 (535)
++.+.++.++.+++.|+.|+++++++++.++++.+...++..+..++++||+|...+++.+++++++|+++++||||.|+
T Consensus 244 s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~~~~~~~~~~~~~~k~~PPlr~~~~~~~L~~~l~~G~i~~igTDh~p~ 323 (486)
T PLN02942 244 MSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTIASKYVMSPPIRPAGHGKALQAALSSGILQLVGTDHCPF 323 (486)
T ss_pred CCHHHHHHHHHHHHCCCcEEEEECchhheeCHHHhcCcccccCcceEECCCCCCHHHHHHHHHHhcCCceEEEECCCCCC
Confidence 99999899999999999999999999999999888665555678899999999999999999999999999999999999
Q ss_pred ChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCC
Q 009410 372 NSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS 448 (535)
Q Consensus 372 ~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~ 448 (535)
+...++.+.++|..+|. |++..++.+++.++..+.++++++++++|.|||++||+++++|+|++|++||||++|.++
T Consensus 324 ~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~i~~~~~l~~~t~~pA~~lgl~~~~G~l~~G~~ADlv~vd~~~ 403 (486)
T PLN02942 324 NSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTMVESGQISPTDYVRVTSTECAKIFNIYPRKGAILAGSDADIIILNPNS 403 (486)
T ss_pred ChHHhhcccCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCCCcCCCCcCCEEEEcCCc
Confidence 88877654457887876 888889888877777778999999999999999999997778999999999999999999
Q ss_pred ceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCCCcccccCchhhhHHHhhhccccc
Q 009410 449 SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNYLFHGLDKADAKYLSSLQAPV 528 (535)
Q Consensus 449 ~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (535)
.+.++...+.++..|+||+|..+.++|..||++|++||++|+++..++.|++++++.+.++|.+..++++.|++||+.|+
T Consensus 404 ~~~v~~~~~~s~~~~~py~g~~l~g~v~~tiv~G~~v~~~g~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (486)
T PLN02942 404 TFTISAKTHHSRIDTNVYEGRRGKGKVEVTISQGRVVWENGELKVVRGSGRYIEMPPFSYLFDGIQKADAAYLSSLRAPV 483 (486)
T ss_pred cEEEcHHHccccCCCCCccCcEeeeeEEEEEECCEEEEECCEEeccCCCceEecCCCcccccccccccccccCccccccc
Confidence 99999988899999999999999999999999999999999999888899999998876678888999999999999999
Q ss_pred cc
Q 009410 529 KR 530 (535)
Q Consensus 529 ~~ 530 (535)
++
T Consensus 484 ~~ 485 (486)
T PLN02942 484 KR 485 (486)
T ss_pred cc
Confidence 87
No 2
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=100.00 E-value=4.9e-64 Score=471.56 Aligned_cols=480 Identities=55% Similarity=0.902 Sum_probs=456.0
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHH
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~ 131 (535)
+..++|+|++|+..+.....||+++||.|.+|+++..++.+.++||++|++|+||.||.|+|+-.+++|....++|.++.
T Consensus 13 s~rllikgg~vvN~d~~~~aDV~vedGiI~~vg~~l~ipgg~~~ida~g~~ViPGgID~Hthlq~p~~G~ts~DdF~~GT 92 (522)
T KOG2584|consen 13 SNRLLIKGGRVVNDDQSFKADVYVEDGIIKEVGENLIIPGGVKVIDATGKMVIPGGIDPHTHLQMPFMGMTSVDDFFQGT 92 (522)
T ss_pred ccceeeeCCEEEccCCceeeeEEeccCEEEEecccEEcCCCceEEecCCcEEecCccCccceeccccCCccchhhhhccc
Confidence 56699999999998888899999999999999999988989999999999999999999999999999999999999999
Q ss_pred HHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCC
Q 009410 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (535)
+++++.|+|.++|+..|... ...++++.++..+. ....+|+++.+++.|..+..+++.-+.++.|+..|++|+.|.+.
T Consensus 93 kAAlaGGtTmiID~vlp~~~~slv~afe~wr~~Ad~k~cCDyglhv~It~W~~~v~eem~~l~~ekGvnsF~~fmayk~~ 172 (522)
T KOG2584|consen 93 KAALAGGTTMIIDFVLPDKGTSLVEAFEKWREWADPKVCCDYGLHVGITWWSPSVKEEMEILVKEKGVNSFKFFMAYKDL 172 (522)
T ss_pred HHHhcCCceEEEEEecCCCCchHHHHHHHHHhhcCCceeeeeeeeEeeeecCcchHHHHHHHhhhcCcceEEeeeeeccc
Confidence 99999999999999887774 78899999988874 68999999999999999999999988889999999999999999
Q ss_pred CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEE
Q 009410 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (535)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (535)
++++++++.+.+..+++.|....+|+++...+.+..+.+.++|++++++|..++|...|.+++.+++.++...+.|+.++
T Consensus 173 ~~v~d~~lye~l~~~~~lgala~vHAEngd~iae~q~~~l~~gitgPEgh~lSRPee~EaEA~~rai~ia~~~ncPlyvv 252 (522)
T KOG2584|consen 173 YMVRDSELYEALKVCAELGALAMVHAENGDAIAEGQQRLLELGITGPEGHELSRPEELEAEATNRAITIARQANCPLYVV 252 (522)
T ss_pred cccCHHHHHHHHHHHhhcchhheehhhcchhhhhhhhHHHHcCCcCcccccccCchhhhHHHHHHHHHHHHhcCCCcceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcc-cHHHHHHHHhcCCeEEEeCCC
Q 009410 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASG-HNKALQAALATGILQLVGTDH 368 (535)
Q Consensus 290 H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~-~~~~~~~~l~~Gv~~~lgtD~ 368 (535)
|..+..+.+.+.++++.|..|..+|+...+..+...++..+|..+..|.++||+|... ....++.+|..|..-..||||
T Consensus 253 hVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~~~w~~Aa~~v~sPPlr~d~~t~~~L~~lLa~g~L~~tgSdh 332 (522)
T KOG2584|consen 253 HVMSKSAADAIALARKKGRVVFGEPITASLGTDGSHYWSKDWDHAAAFVTSPPLRPDPTTPDGLMDLLAEGDLQLTGSDH 332 (522)
T ss_pred EEeehhHHHHHHHHHhcCceeecccchhhhcccchhhccCChhhcceeeeCCCCCCCCCCHHHHHHHHhcCccceeecCC
Confidence 9999998899999999999999999998998899999999999999999999999986 788999999999999999999
Q ss_pred CCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEc
Q 009410 369 CAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 445 (535)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld 445 (535)
++++...+.++.+.|..+|+ |++.+|++.|.+.+..+.|++.+.+...+.|+|++|++.+++|+|.+|.+|||||||
T Consensus 333 ctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~G~md~~~fVavtstnaAkifnlYprKGrIavGsDADiVIwd 412 (522)
T KOG2584|consen 333 CTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWD 412 (522)
T ss_pred CCCCHHHHhhccCccccCCCccccccccceeeeehhcccCccCcccEEEEecccchhheeccCcCceecccCCCcEEEEC
Confidence 99999999999999999998 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCCCc-ccccCchhhh--HHHhh
Q 009410 446 PNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFN-YLFHGLDKAD--AKYLS 522 (535)
Q Consensus 446 ~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~ 522 (535)
++...+|++........++.|+|+...+.+.-|+..||+||.+|.+....+.|+++.+++|. +++.+.++++ ..++.
T Consensus 413 p~at~tIS~~th~~~~d~NifEGm~~~G~plvtIsrGriv~eng~~~v~~g~G~fip~~~f~~~vy~~i~~r~~~~~~~~ 492 (522)
T KOG2584|consen 413 PNATKTISAKTHHSANDFNIFEGMTVHGVPLVTISRGRVVYENGNLVVTEGSGRFIPRSPFPDYVYKRIKARDKTAELRG 492 (522)
T ss_pred CCcceEeccccccccccceeecCcEecceeEEEEeCCeEEEecCcEEEecCCCceeeCCCCcHHHHHHHHhhhccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999 6999999998 57777
Q ss_pred hcccccccc
Q 009410 523 SLQAPVKRL 531 (535)
Q Consensus 523 ~~~~~~~~~ 531 (535)
.-|.|.+.+
T Consensus 493 v~r~~y~~~ 501 (522)
T KOG2584|consen 493 VPRGPYDGP 501 (522)
T ss_pred ccccccCCc
Confidence 777766543
No 3
>PRK13404 dihydropyrimidinase; Provisional
Probab=100.00 E-value=1.6e-57 Score=470.09 Aligned_cols=448 Identities=37% Similarity=0.622 Sum_probs=380.4
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeeccccccccccccc-CCCCchhhhHHH
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF-MGSETIDDFFSG 130 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~-~g~~~~~~~~~~ 130 (535)
.++++|+|++|+++.....++|+|+||+|++|++.. +.+.++||++|++|+|||||+|+|+.... .+....+++...
T Consensus 3 ~~d~~i~~~~v~~~~~~~~~~i~I~dg~I~~i~~~~--~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~e~~~~~ 80 (477)
T PRK13404 3 AFDLVIRGGTVVTATDTFQADIGIRGGRIAALGEGL--GPGAREIDATGRLVLPGGVDSHCHIDQPSGDGIMMADDFYTG 80 (477)
T ss_pred CCcEEEECCEEEcCCCceEEEEEEECCEEEEecCCC--CCCCeEEECCCCEEecCEEEeEEcCCccccCCccccchHHHH
Confidence 467899999999977666789999999999998753 34578999999999999999999997641 124456888888
Q ss_pred HHHHHhCCcEEEeccccCCC-CChHHHHHHHHHHhc-ccccccceeeeeecCChhh-HHHHHHHHHHcCCCEEEEEeecC
Q 009410 131 QAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVV-SDEMEVMVKEKGINSFKFFMAYK 207 (535)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~ik~~~~~~ 207 (535)
.+.++.+||||++|+..... ....+.++....... ...++++++........+. .++++.+. +.|++.+|+|+++.
T Consensus 81 s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~~v~~l~-~~G~~~iKi~~~~~ 159 (477)
T PRK13404 81 TVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAVIDYAFHLIVADPTEEVLTEELPALI-AQGYTSFKVFMTYD 159 (477)
T ss_pred HHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcEEEEEEEEEecCCChhhHHHHHHHHH-HcCCCEEEEEecCC
Confidence 99999999999999864322 245666666655443 3567777776655443333 35677776 78999999997654
Q ss_pred CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 208 GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 208 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
+ ...+++.+.++++.|+++|.++.+|+++...+....+.+...|......|...+|..++...+.+.+.+++..+.++|
T Consensus 160 ~-~~~~~~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~~~~~~~G~~~~~~~~~~rp~~~E~~~v~~~~~la~~~g~~~h 238 (477)
T PRK13404 160 D-LKLDDRQILDVLAVARRHGAMVMVHAENHDMIAWLTKRLLAAGLTAPKYHAISRPMLAEREATHRAIALAELVDVPIL 238 (477)
T ss_pred C-CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHCCCcchhhccccCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 3 456889999999999999999999999988776666777888988888888899999999999999999999999999
Q ss_pred EEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCC
Q 009410 288 VVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTD 367 (535)
Q Consensus 288 ~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD 367 (535)
+.|.++....+.+..+++.|+.++++++||+++++.+.+..... .+..++++||+|...++.++++++.+|...+++||
T Consensus 239 i~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~~~~~~~-~g~~~k~~Pplr~~~d~~aL~~~l~~G~id~i~sD 317 (477)
T PRK13404 239 IVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAEDLDRPGM-EGAKYICSPPPRDKANQEAIWNGLADGTFEVFSSD 317 (477)
T ss_pred EEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCHHHhcCccc-cCCceEECCCCCChHHHHHHHHHHhCCCceEEecC
Confidence 99999999999999999999999999999999999987743211 25789999999999999999999999999999999
Q ss_pred CCCCChhhhh----cC-CCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCc
Q 009410 368 HCAFNSTQKA----FG-IDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDA 439 (535)
Q Consensus 368 ~~~~~~~~~~----~~-~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~A 439 (535)
|.|+...++. .+ ..+|+.+|. |+++.++.+++..+...+++++++++++|.|||++||+.+++|+|++|+.|
T Consensus 318 Hap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll~~~v~~~~ls~~~~~~~~t~~pA~~lgl~~~~G~i~~G~~A 397 (477)
T PRK13404 318 HAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLFSEGVVKGRISLNRFVALTSTNPAKLYGLYPRKGAIAIGADA 397 (477)
T ss_pred CCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCceecCCCcC
Confidence 9999755431 00 125777776 899999999988887878999999999999999999996678999999999
Q ss_pred cEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecC
Q 009410 440 DIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 504 (535)
Q Consensus 440 Dlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~ 504 (535)
|||++|.+..+.++.+++.+...|+||+|..+.++|..||++|++||++|+++..++.|+++++.
T Consensus 398 Dlvivd~~~~~~v~~~~~~~~~~~sp~~g~~~~g~v~~tiv~G~vv~~~g~~~~~~~~G~~~~~~ 462 (477)
T PRK13404 398 DIAIWDPDREVTITNADLHHAADYTPYEGMRVTGWPVTVLSRGRVVVEDGELVAERGSGQFLARS 462 (477)
T ss_pred CEEEEcCCccEEEchHHhcccCCCCcccceEEeeeEEEEEECCEEEEECCEEecCCCceeEecCC
Confidence 99999999999999999999999999999999999999999999999999999888789999873
No 4
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=100.00 E-value=6.4e-57 Score=468.73 Aligned_cols=448 Identities=54% Similarity=0.828 Sum_probs=375.8
Q ss_pred EEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHHH
Q 009410 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (535)
Q Consensus 55 ~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~ 134 (535)
++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+.....+..+++++....+++
T Consensus 1 ~li~n~~vv~~~~~~~~~V~I~dg~I~~Ig~~~~~~~~~~vIDa~G~~vlPGlID~H~H~~~~~~~~~~~e~~~~~s~~a 80 (454)
T TIGR02033 1 KLIRGGTVVNADDVFQADVLIEGGKIVAVGRNLSPPDAVEEIDATGKYVMPGGIDVHTHLEMPFGGTVTADDFFTGTKAA 80 (454)
T ss_pred CEEECcEEEcCCCceEEEEEEECCEEEEecCCCCCCCCCcEEECCCCEEecCEecceeccCcccCCCCCcchHHHHHHHH
Confidence 47999999998777789999999999999976433335689999999999999999999987643456788888888999
Q ss_pred HhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcC
Q 009410 135 LAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (535)
Q Consensus 135 l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 212 (535)
+++||||++||....+. ...+.++....... ....+++++........+..++......+.|+..+|+++++++.+..
T Consensus 81 ~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 160 (454)
T TIGR02033 81 AAGGTTTIIDFALPHKGESLTEALETWHEKAEGKSVIDYGFHMMITHWNDEVLEEHIPELVEEGITSFKVFMAYKNLLMV 160 (454)
T ss_pred HhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhccCceEEEEEEecccCCcHHHHHHHHHHHHhcCCcEEEEEeecCCCCCC
Confidence 99999999999755432 45566665554432 24555555544333334434442233336788999999888777788
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
+.+.+.++++.|++++.++.+|+++........+.+.+.|......|...+|...+...+.+++.++...+.+++++|++
T Consensus 161 ~~~~l~~~~~~a~~~~~~v~~H~E~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~~v~~~~~~~~~~~~~~~i~H~s 240 (454)
T TIGR02033 161 DDEELFEILKRAKELGALLQVHAENGDVIAELQARLLAQGKTGPEYHALSRPPESEAEAVARAIALAALANAPLYVVHVS 240 (454)
T ss_pred CHHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHHHHHcCCCChhHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 99999999999999999999999887777777777778899888889889999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCC
Q 009410 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (535)
Q Consensus 293 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~ 372 (535)
+...++.++.+++.|+.++++.+|+++.++.+.+...++. ...++++||+|...+++++++++++|+.+++||||.|++
T Consensus 241 ~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~~~~~~-~~~~~~~pPlr~~~~~~~l~~~l~~G~i~~igtDh~p~~ 319 (454)
T TIGR02033 241 TASAVDEIAEAREKGQPVYGETCPQYLLLDDTIYDKPGFE-GAKYVCSPPLREKEDQDALWSALSSGALQTVGSDHCPFN 319 (454)
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCchheeecHHHhcCcccc-cceeEECCCCCChhhHHHHHHHhhcCCeEEEECCCCCCC
Confidence 9887789999999999999999999999998877543333 356789999999999999999999999999999999988
Q ss_pred hhhh-hcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCC
Q 009410 373 STQK-AFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS 448 (535)
Q Consensus 373 ~~~~-~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~ 448 (535)
...+ ......|..+|+ |+++.++.+++.++..+.++++++++++|.|||++||+++++|+|++|++|||||+|.+.
T Consensus 320 ~~~k~~~~~~~~~~~~~G~~g~e~~l~~l~~~~v~~~~~~~~~~~~~~t~~pa~~~gl~~~~G~l~~G~~AD~~i~d~~~ 399 (454)
T TIGR02033 320 FAQKKAIGKDDFTKIPNGGPGVEERMTLLFDEGVATGRITLEKFVELTSTNPAKIFNMYPRKGTIAVGSDADIVIWDPNR 399 (454)
T ss_pred HHHhhhcccCCHhhCCCCCchHHhHHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHcCCCCCCCccccCCcCCEEEEcCCc
Confidence 6654 111235777776 889999999988888888999999999999999999997678999999999999999999
Q ss_pred ceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeec
Q 009410 449 SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM 503 (535)
Q Consensus 449 ~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~ 503 (535)
++.++.+++.+...|+||.|+.+.++|..||++|++||++|+++..++.|+++++
T Consensus 400 ~~~~~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~~~g~~~~~ 454 (454)
T TIGR02033 400 TTVISAETHHDNADYNPFEGFKVQGAVVSVLSRGRVVVEDGQFVGTAGSGRFIKR 454 (454)
T ss_pred CeeechHHhhccCCCCcccCeEEeeeEEEEEECCEEEEECCEEecCCCCcceecC
Confidence 9999998899999999999999999999999999999999999987778999863
No 5
>PRK08323 phenylhydantoinase; Validated
Probab=100.00 E-value=1.1e-56 Score=467.07 Aligned_cols=448 Identities=51% Similarity=0.815 Sum_probs=383.5
Q ss_pred cEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHH
Q 009410 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~ 133 (535)
+++|+|++|++++...+++|+|+||+|++|++. .+.++||++|++|+|||||+|+|+...+.+...+++++...+.
T Consensus 2 d~li~n~~v~~~~~~~~~~v~I~~g~I~~i~~~----~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~ 77 (459)
T PRK08323 2 STLIKNGTVVTADDTYKADVLIEDGKIAAIGAN----LGDEVIDATGKYVMPGGIDPHTHMEMPFGGTVSSDDFETGTRA 77 (459)
T ss_pred cEEEECCEEEcCCCceEEEEEEECCEEEEEecC----CCceEEECCCCEEeccEEeeeeccccccCCccccCcHHHHHHH
Confidence 589999999998777789999999999999875 2478999999999999999999997654344567888888889
Q ss_pred HHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCc
Q 009410 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (535)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (535)
++++||||++|+....+. ...+.++....... ....+++++........+..+++..+. +.|...+|+++.+++...
T Consensus 78 a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~~~~~~~ 156 (459)
T PRK08323 78 AACGGTTTIIDFALQPKGQSLREALEAWHGKAAGKAVIDYGFHMIITDWNEVVLDEMPELV-EEGITSFKLFMAYKGALM 156 (459)
T ss_pred HHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhccCceEEEEEEEEecCCcHHHHHHHHHHH-HcCCCEEEEEEecCCCCC
Confidence 999999999999655432 45566665554432 345666665544434455567777777 678899999988877778
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
.+.+.+.++++.|+++|.++.+|+++........+.+...|......|...+|...+..++.+++++++..+.++|+.|+
T Consensus 157 ~s~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~~~~~~i~H~ 236 (459)
T PRK08323 157 LDDDELLRALQRAAELGALPMVHAENGDAIAYLQAKLLAEGKTGPEYHALSRPPEVEGEATNRAIMLAELAGAPLYIVHV 236 (459)
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCChhhhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 89999999999999999999999988777776777777778888888888899999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCC
Q 009410 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (535)
Q Consensus 292 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~ 371 (535)
++.+..+.++.+++.|+.|+++.+|++++++.+.+...++..+..++++||+|...++.++++++++|+.+++||||.|+
T Consensus 237 s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~~~~~~~~g~~~k~~pPlr~~~~~~~l~~~l~~G~i~~i~sDh~p~ 316 (459)
T PRK08323 237 SCKEALEAIRRARARGQRVFGETCPQYLLLDESEYDGPDWFEGAKYVMSPPLRDKEHQDALWRGLQDGDLQVVATDHCPF 316 (459)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCccceeecHHHhcCCccccccceEECCCCCChHHHHHHHHHhhcCCeeEEECCCCCC
Confidence 99988899999999999999999999999998877654433457789999999999999999999999999999999998
Q ss_pred Chhhhhc-CCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCC
Q 009410 372 NSTQKAF-GIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPN 447 (535)
Q Consensus 372 ~~~~~~~-~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~ 447 (535)
+...++. +.++|+.+|. |+++.++.+++..+..+.++++++++++|.|||++||+.++.|+|++|+.|||||+|.+
T Consensus 317 ~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~t~~pA~~lgl~~~~G~l~~G~~ADlvi~d~~ 396 (459)
T PRK08323 317 CFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSEGVMTGRITLNRFVELTSTNPAKIFGLYPRKGTIAVGADADIVIWDPN 396 (459)
T ss_pred ChHHhcccccCCHhhCCCCcchHhhhHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHhCCCCCCcccCCCCcCCEEEEcCC
Confidence 8766542 3346777776 78999999997777777899999999999999999999767899999999999999999
Q ss_pred CceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCCC
Q 009410 448 SSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 506 (535)
Q Consensus 448 ~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~~ 506 (535)
.+|.++.+++.+...|+||+|..+.++|.+||++|++||++|+++..++.|++++++.+
T Consensus 397 ~~~~v~~~~~~s~~~~s~~~g~~~~g~v~~viv~G~~v~~~g~~~~~~~~G~~~~~~~~ 455 (459)
T PRK08323 397 ATKTISASTLHSNVDYNPYEGFEVTGWPVTTLSRGEVVVEDGEFRGKAGHGRFLKRKPF 455 (459)
T ss_pred cccccCHHHHhhcCCCCcccCcEEeeeEEEEEECCEEEEECCEEeccCCCceEeeCCCC
Confidence 99999999999999999999999999999999999999999999987778999998655
No 6
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=100.00 E-value=2.6e-56 Score=462.36 Aligned_cols=442 Identities=54% Similarity=0.861 Sum_probs=375.8
Q ss_pred EEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHHH
Q 009410 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (535)
Q Consensus 55 ~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~ 134 (535)
++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+...+....++++++...+.+
T Consensus 1 lli~~~~v~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~~~viD~~g~~vlPGlID~H~H~~~~~~~~~~~e~~~~~~~~a 80 (447)
T cd01314 1 LIIKNGTIVTADGSFKADILIEDGKIVAIGPNLEAPGGVEVIDATGKYVLPGGIDPHTHLELPFMGTVTADDFESGTRAA 80 (447)
T ss_pred CEEECCEEECCCCceeeeEEEECCEEEEeeCCCCCCCCceEEECCCCEEecCEEeccccccccccCccCcchHHHHHHHH
Confidence 47999999998777789999999999999976433334789999999999999999999987633345778888888999
Q ss_pred HhCCcEEEeccccCCC-CChHHHHHHHHHHh-cccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcC
Q 009410 135 LAGGTTMHIDFVIPIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (535)
Q Consensus 135 l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 212 (535)
+.+||||++||....+ ....+.++...... .....+++++........+..+++..+. +.|...+|+++.+++....
T Consensus 81 ~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~-~~g~~~ik~~~~~~~~~~~ 159 (447)
T cd01314 81 AAGGTTTIIDFAIPNKGQSLLEAVEKWRGKADGKSVIDYGFHMIITDWTDSVIEELPELV-KKGISSFKVFMAYKGLLMV 159 (447)
T ss_pred HhCCCcEEEeCCCCCCCCCHHHHHHHHHHHhcCCCcccEEEEEeecCCChHHHHHHHHHH-HcCCCEEEEEeccCCCCCC
Confidence 9999999999975433 34566666554443 2345566655544443445566777776 4788899999888777778
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
+.+.+.++++.|++.+.++++|+++........+.+...|....+.|...+|...+...+.+++.+++..+.++++.|++
T Consensus 160 s~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~~~~~H~s 239 (447)
T cd01314 160 DDEELLDVLKRAKELGALVMVHAENGDVIAELQKKLLAQGKTGPEYHALSRPPEVEAEATARAIRLAELAGAPLYIVHVS 239 (447)
T ss_pred CHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHcCCCChHHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 99999999999999999999999888777777777777798888888888999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCC
Q 009410 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (535)
Q Consensus 293 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~ 372 (535)
+....+.++.+++.|+.++++.+|+++.++.+.+.... ..+..++++||+|...++.++++++++|+.+.+||||.|++
T Consensus 240 ~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~~-~~g~~~~~~pplr~~~~~~~l~~~l~~G~i~~igsDh~~~~ 318 (447)
T cd01314 240 SKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKDW-FEGAKYVCSPPLRPKEDQEALWDGLSSGTLQTVGSDHCPFN 318 (447)
T ss_pred CHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhcccc-ccccceEECCCCCChHHHHHHHHHHhCCCeeEEECCCCCCC
Confidence 99988899999999999999999999999988764211 13467899999999999999999999999999999999998
Q ss_pred hhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCc
Q 009410 373 STQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSS 449 (535)
Q Consensus 373 ~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~ 449 (535)
...++....+|..+|+ |+++.++.++++++..+.++++++++++|.|||++||+.+++|+|++|++|||||+|.+..
T Consensus 319 ~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~~~~~~~~~~~~~~~t~~pA~~~gl~~~~G~l~~G~~AD~vi~d~~~~ 398 (447)
T cd01314 319 FAQKARGKDDFTKIPNGVPGVETRMPLLWSEGVAKGRITLEKFVELTSTNPAKIFGLYPRKGTIAVGSDADLVIWDPNAE 398 (447)
T ss_pred HHHhhcccCCHhhCCCCCchHhhhHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHhCCCCCCCccCCCCcCCEEEEeCCcC
Confidence 8777654457888876 8999999999888877789999999999999999999977899999999999999999999
Q ss_pred eeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCc
Q 009410 450 FEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSG 498 (535)
Q Consensus 450 ~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~ 498 (535)
+.++.+++.+...|+||.|..+.++|.+||++|++||++|+++..++.|
T Consensus 399 ~~~~~~~~~~~~~~~~~~g~~~~g~v~~t~v~G~~v~~~~~~~~~~~~g 447 (447)
T cd01314 399 KTISADTHHHNVDYNIFEGMKVKGWPVVTISRGKVVVEDGELVGEKGSG 447 (447)
T ss_pred EEecHHHhhccCCCCcccCeEEeeeEEEEEECCEEEEECCEEeccCCCC
Confidence 9999999999999999999999999999999999999999999876654
No 7
>PLN02795 allantoinase
Probab=100.00 E-value=1.6e-55 Score=456.52 Aligned_cols=447 Identities=23% Similarity=0.316 Sum_probs=367.0
Q ss_pred CcccccCcccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCC---CCceEEecCCCEEeecccccccccccccCCC
Q 009410 45 PQCGIQSSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHTHLAMEFMGS 121 (535)
Q Consensus 45 ~~~~~~~~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~---~~~~vID~~G~~vlPGlID~H~H~~~~~~g~ 121 (535)
.+|+..++.+++|+|++|++++....++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+... +.
T Consensus 36 ~~~~~~~~~~~vi~~~~vv~~~~~~~~~v~i~dG~I~~I~~~~~~~~~~~~~~~ida~G~~v~PG~ID~H~H~~~~--~~ 113 (505)
T PLN02795 36 DRCSLLPWPHFVLYSKRVVTPAGVIPGAVEVEGGRIVSVTKEEEAPKSQKKPHVLDYGNAVVMPGLIDVHVHLNEP--GR 113 (505)
T ss_pred cccccccccceEEECCEEEECCCeEEEEEEEECCEEEEecCccccccccCCCEEEECCCCEEecCEEecccCcCCC--Cc
Confidence 3444444579999999999987777899999999999999754321 256899999999999999999999765 55
Q ss_pred CchhhhHHHHHHHHhCCcEEEecccc-C-CCCChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCC
Q 009410 122 ETIDDFFSGQAAALAGGTTMHIDFVI-P-INGSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGIN 198 (535)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~-~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 198 (535)
..++++....++++.+||||++||.. . +.......++...+... ...++++++.+......+..+.+.++. +.|+.
T Consensus 114 ~~~e~~~~~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~l~~~~-~~G~~ 192 (505)
T PLN02795 114 TEWEGFPTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAKGKLYVDVGFWGGLVPENAHNASVLEELL-DAGAL 192 (505)
T ss_pred cchhHHHHHHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHHhccCceeeeeceecccCcchhHHHHHHHHH-HCCCc
Confidence 56788889999999999999999972 2 22245555555555443 356667666544333334455666665 67888
Q ss_pred EEEEEeecCCC---CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHH
Q 009410 199 SFKFFMAYKGS---FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (535)
Q Consensus 199 ~ik~~~~~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 275 (535)
++|+|+.+++. ...+.+.+.++++.++++|.++.+|+++........ ....+...+..|...+|..+|..++.++
T Consensus 193 g~k~f~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~--~~~~~~~~~~~~~~~rP~~aE~~ai~~~ 270 (505)
T PLN02795 193 GLKSFMCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVESDS--RLDADPRSYSTYLKSRPPSWEQEAIRQL 270 (505)
T ss_pred EEEEEecccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecCChhHhhhhh--hhhcCCcChhHhcccCCHHHHHHHHHHH
Confidence 89998765443 256889999999999999999999999876543221 1133444455566778999999999999
Q ss_pred HHHHHhc-------CCCEEEEEccCH-HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcc
Q 009410 276 IRLAEFV-------NTPLYVVHVMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASG 347 (535)
Q Consensus 276 ~~~~~~~-------~~~~~~~H~~~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 347 (535)
+.+++.. +.++|+.|.++. +..+.++.+++.|+.|++++++||++++.+.+.. .+..++++||+|...
T Consensus 271 ~~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev~ph~L~l~~~~~~~----~~~~~k~~PPLR~~~ 346 (505)
T PLN02795 271 LEVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVETCPHYLAFSAEEIPD----GDTRYKCAPPIRDAA 346 (505)
T ss_pred HHHHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEEeChhhhcccHHHccC----CCCceEEcCCCCChH
Confidence 9999999 999999999999 8899999999999999999999999999987743 357899999999999
Q ss_pred cHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHc
Q 009410 348 HNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIF 424 (535)
Q Consensus 348 ~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~l 424 (535)
+++++|++++.|...+++|||.|++...+......|+.+|. |++..++.++..++ +.+++++++++++|.|||++|
T Consensus 347 d~~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~~~~~~~~-~~~l~l~~~v~~~s~~pA~~~ 425 (505)
T PLN02795 347 NRELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPATWTAGR-AYGLTLEQLARWWSERPAKLA 425 (505)
T ss_pred HHHHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhCCCCceeHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998887654456887776 99999999997666 456999999999999999999
Q ss_pred CCCCCCccccCCCCccEEEEcCCCceeeecCC-ccccCC-CCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEee
Q 009410 425 NVYPRKGAILVGSDADIIIFNPNSSFEITARS-HHSRLD-TNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIE 502 (535)
Q Consensus 425 gl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~-~~~~~~-~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~ 502 (535)
|+ +++|+|++|+.|||||+|.+..|.++.+. +.+... |+||+|+.+.++|.+||++|++||++|+++. ++.|+++.
T Consensus 426 gl-~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~~s~~~~~sp~~G~~l~g~v~~tiv~G~~v~~~g~~~~-~~~G~~~~ 503 (505)
T PLN02795 426 GL-DSKGAIAPGKDADIVVWDPEAEFVLDESYPIYHKHKSLSPYLGTKLSGKVIATFVRGNLVFLEGKHAK-QACGSPIL 503 (505)
T ss_pred CC-CCCCccCCCCccCEEEEcCCcceEECcchhhhhcCCCcCCCCCeEEEeEEEEEEECCEEEEECCeEcC-CCCCeEec
Confidence 99 67899999999999999999999998774 677887 9999999999999999999999999999984 56788876
Q ss_pred c
Q 009410 503 M 503 (535)
Q Consensus 503 ~ 503 (535)
.
T Consensus 504 ~ 504 (505)
T PLN02795 504 A 504 (505)
T ss_pred C
Confidence 4
No 8
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=100.00 E-value=7.5e-56 Score=443.52 Aligned_cols=422 Identities=31% Similarity=0.495 Sum_probs=373.0
Q ss_pred cEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHH
Q 009410 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~ 133 (535)
+++|+|+++++++....++|+|+||+|++|+++.....+.++||++|++|+|||||.|+|+..+ |...++++.++.++
T Consensus 2 ~~lIk~~~iv~~~~~~~~di~i~~g~I~~Ig~~l~~~~~~~iiD~~g~~v~PG~ID~HVH~rep--g~~~ke~~~tgs~A 79 (430)
T COG0044 2 DLLIKNARVVDPGEDEVADILIKDGKIAAIGKNLEPTSGAEIIDAKGLLVLPGLVDLHVHFREP--GFEHKETFETGSRA 79 (430)
T ss_pred cEEEeccEEEcCCCceEecEEEECCEEEEeccCCCCCCCCcEEECCCCEEccCeeEEEEecCCC--CcchhhhHHHHHHH
Confidence 5899999999986678999999999999999875433678999999999999999999999999 89999999999999
Q ss_pred HHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCc
Q 009410 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (535)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (535)
++++||||++||....+. .....++....... ...+++.++.+.+.......+.+.. . . ..++|.|+++.. ..
T Consensus 80 Aa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~it~~~~~~~~~~~~-~-~--~~g~~~F~~~~~-~~ 154 (430)
T COG0044 80 AAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSVVDYAFYGGLTKGNLGKLELTER-G-V--EAGFKGFMDDST-GA 154 (430)
T ss_pred HHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccceeEEEEEEEEeccccchhhhhhh-h-h--ccceEEEecCCc-Cc
Confidence 999999999999765554 56666776666665 6888999999888776543322222 2 1 455677776543 55
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
.+.+.+++.++.+...|..+..|+++..... ......|......|...+|..++...+.+.+++++..+.++|++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~~---~~~~~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~g~~vhi~Hi 231 (430)
T COG0044 155 LDDDVLEEALEYAAELGALILVHAEDDDLIA---EGVMNEGLRAPELGLAGRPPIAEASAIARDLELARATGARVHICHI 231 (430)
T ss_pred CCHHHHHHHHHHHHhcCCeEEEecCChhHhh---hHHHhcCccchhhccCCCChHHHHHHHHHHHHHHHHhCCcEEEEEc
Confidence 7899999999999999999999999886554 3344568888888888999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCC
Q 009410 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (535)
Q Consensus 292 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~ 371 (535)
++.+..+.++.++..|.+|++++++||++++++.+.. .+..++++||+|...++.++++.+++|....++|||+|+
T Consensus 232 St~~sv~li~~ak~~g~~vt~EvtphHL~l~~~~~~~----~~~~~k~nPPLR~~~dr~aL~~~l~~G~ID~iasDHaPh 307 (430)
T COG0044 232 STKESVELIRAAKAEGIRVTAEVTPHHLLLDEEDIED----LGTLAKVNPPLRDEEDREALWEALKDGVIDVIASDHAPH 307 (430)
T ss_pred CCHHHHHHHHHHhhcCCceEEeecchheEccHhHhhc----cCcceEECCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCC
Confidence 9999999999999999999999999999999988865 458899999999999999999999999999999999999
Q ss_pred ChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCC
Q 009410 372 NSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS 448 (535)
Q Consensus 372 ~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~ 448 (535)
+..++.. +|..+|. |+|..+++++. +++.+.+|+.+.+++.|.|||++||+.. .|.|++|+.|||+|+|.+.
T Consensus 308 t~eeK~~---~f~~ap~G~~glE~~lpl~l~-lv~~g~lsl~~~v~~~S~nPA~ifgl~~-~g~i~~G~~ADl~lvD~~~ 382 (430)
T COG0044 308 TLEEKRL---PFEEAPSGIPGLETALPLLLT-LVKKGRLSLERLVELLSTNPARIFGLPP-KGAIEEGADADLVLVDPDE 382 (430)
T ss_pred CHHHhcc---chhhCCCCCccHHHHHHHHHH-HHHcCCcCHHHHHHHHhhCHHHHhCCCC-CCcccCCCccCEEEEcCCC
Confidence 9999864 5888887 99999999997 9999999999999999999999999954 7889999999999999999
Q ss_pred ceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeeccc
Q 009410 449 SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 494 (535)
Q Consensus 449 ~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~ 494 (535)
.|.++.+.+.++..|+||+|..+.+.|.+|+++|++||++++....
T Consensus 383 ~~~i~~~~~~sk~~~sPf~G~~~~g~v~~Ti~rG~~v~~~~~~~~~ 428 (430)
T COG0044 383 EWTIRAEELYSKAKNSPFEGFELKGRVVATILRGKVVYEDGEVIAK 428 (430)
T ss_pred CeEEchhhhccccCCCCcCCCEEeeeEEEEEECCEEEEECCcEecC
Confidence 9999999999999999999999999999999999999999986654
No 9
>PRK06189 allantoinase; Provisional
Probab=100.00 E-value=2.1e-54 Score=446.06 Aligned_cols=440 Identities=27% Similarity=0.393 Sum_probs=368.9
Q ss_pred CcccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHH
Q 009410 51 SSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~ 130 (535)
|+++++|+|++|+++++...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+... +....+++...
T Consensus 1 ~~~~~~i~~~~v~~~~~~~~~~v~i~~G~I~~i~~~~~-~~~~~~iD~~g~~vlPG~ID~H~H~~~~--~~~~~~~~~~~ 77 (451)
T PRK06189 1 MMYDLIIRGGKVVTPEGVYRADIGIKNGKIAEIAPEIS-SPAREIIDADGLYVFPGMIDVHVHFNEP--GRTHWEGFATG 77 (451)
T ss_pred CCccEEEECCEEEcCCCcEEEEEEEECCEEEEecCCCC-CCCCeEEECCCCEEecCEEEeeeccCCC--CCCCcccHHHH
Confidence 45789999999999887778999999999999987643 2357899999999999999999999876 55567888888
Q ss_pred HHHHHhCCcEEEeccccC--CCCChHHHHHHHHHHh-cccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecC
Q 009410 131 QAAALAGGTTMHIDFVIP--INGSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK 207 (535)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~ 207 (535)
.+.++++||||+++|... +.......+....+.. ....+++.++..... +..+++..+. +.|+..+|+|++..
T Consensus 78 ~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~l~~l~-~~Gv~~~k~f~~~~ 153 (451)
T PRK06189 78 SAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFALWGGLVP---GNLEHLRELA-EAGVIGFKAFMSNS 153 (451)
T ss_pred HHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCceEeEEEEecccc---cCHHHHHHHH-HcCCcEEEEEcccc
Confidence 999999999999999521 1112334444444433 345677777643332 2355666766 78999999987643
Q ss_pred C---CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCC
Q 009410 208 G---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT 284 (535)
Q Consensus 208 ~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (535)
+ ....+...+.++++.+.+.+..+.+|+++..........+...|..+...|...+|..++...+.+.+.++++.+.
T Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~P~~~E~~~v~~~l~la~~~g~ 233 (451)
T PRK06189 154 GTDEFRSSDDLTLYEGMKEIAALGKILALHAESDALTRHLTTQARQQGKTDVRDYLESRPVVAELEAVQRALLYAQETGC 233 (451)
T ss_pred CCCCcCcCCHHHHHHHHHHHHhcCCeEEEECCChHHHHHHHHHHHhcCCCChhHccccCCHHHHHHHHHHHHHHHHHhCC
Confidence 2 2345778899999999999999999999887666555566677877777788888999999999999999999999
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEE
Q 009410 285 PLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLV 364 (535)
Q Consensus 285 ~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~l 364 (535)
++|+.|.++...++.+..+++.|..+++++++|+++++++.+.. .+..++++||+|...++.++++++++|+.+++
T Consensus 234 ~~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~ph~L~l~~~~~~~----~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~i 309 (451)
T PRK06189 234 PLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLFTEEDFER----IGAVAKCAPPLRSRSQKEELWRGLLAGEIDMI 309 (451)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCcEEEEeCHHHhhcCHhHhhC----cCCceEEeCCCCChhhHHHHHHHHhCCCceEE
Confidence 99999999999999999999999999999999999999987753 24678999999999999999999999999999
Q ss_pred eCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccE
Q 009410 365 GTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADI 441 (535)
Q Consensus 365 gtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADl 441 (535)
+|||.|++...+.. ..|+..|. |+++.++.++...+..++++++++++++|.|||++||+ +++|+|++|++|||
T Consensus 310 ~sDh~p~~~~~K~~--~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~npA~~lgl-~~~G~l~~G~~ADl 386 (451)
T PRK06189 310 SSDHSPCPPELKEG--DDFFLVWGGISGGQSTLLVMLTEGYIERGIPLETIARLLATNPAKRFGL-PQKGRLEVGADADF 386 (451)
T ss_pred ECCCCCCCHHHcCc--CCcccCCCCceeHHHHHHHHHHHHHhcCCCCHHHHHHHHhhhHHHHhCC-CCCCcccCCCcCCE
Confidence 99999997765531 25777765 88999999998777777899999999999999999999 56899999999999
Q ss_pred EEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCC
Q 009410 442 IIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRP 505 (535)
Q Consensus 442 vvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~ 505 (535)
+|+|.+..+.++++++.+...|+||+|..+.++|.+|+++|++||++|+++. ...|++++++.
T Consensus 387 vi~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~tiv~G~~v~~~g~~~~-~~~G~~~~~~~ 449 (451)
T PRK06189 387 VLVDLDETYTLTKEDLFYRHKQSPYEGRTFPGRVVATYLRGQCVYQDGEVFP-PPRGQLLRPSV 449 (451)
T ss_pred EEEcCCCCEEECHHHhhhcCCCCCcCCcEEEeEEEEEEECCEEEEECCEEcc-CCCCcEecCCC
Confidence 9999999999998889989999999999999999999999999999999887 45899999754
No 10
>PRK08044 allantoinase; Provisional
Probab=100.00 E-value=3.5e-54 Score=442.31 Aligned_cols=436 Identities=28% Similarity=0.401 Sum_probs=370.5
Q ss_pred CcccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHH
Q 009410 51 SSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~ 130 (535)
|+++++|+|++|++.+....++|+|+||+|++|++... .+.++||++|++|+|||||.|+|+... +....+.+...
T Consensus 1 m~~~~~i~n~~vi~~~~~~~~~i~I~dg~I~~i~~~~~--~~~~~iD~~G~~v~Pg~iD~h~h~~~~--~~~~~e~~~~~ 76 (449)
T PRK08044 1 MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLG--DAKEVMDASGLVVSPGMVDAHTHISEP--GRSHWEGYETG 76 (449)
T ss_pred CCceEEEECcEEEcCCCCEEEEEEEECCEEEEecCCCC--CCCeEEECCCCEEcCCeeccccccCCC--CccccccHHHH
Confidence 34678999999998766667899999999999987542 357899999999999999999999876 55557889999
Q ss_pred HHHHHhCCcEEEecccc-CCC-CChHHHHHHHHHHh-cccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecC
Q 009410 131 QAAALAGGTTMHIDFVI-PIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK 207 (535)
Q Consensus 131 ~~~~l~~GvTtv~d~~~-~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~ 207 (535)
...+++.||||++||.. ..+ ....+.++...+.. ....+++.++.+.... ...++..+. +.|+.++|.|+.+.
T Consensus 77 ~~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~vd~~~~~~~~~~---~~~ei~~l~-~~gv~~fk~~~~~~ 152 (449)
T PRK08044 77 TRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSY---NLDRLHELD-EVGVVGFKCFVATC 152 (449)
T ss_pred HHHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCeeeEEEEeeeCCC---CHHHHHHHH-HcCceEEEEEeccc
Confidence 99999999999999962 212 24556666555544 3467777766655432 345666665 67999999997653
Q ss_pred CC-------CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHH
Q 009410 208 GS-------FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAE 280 (535)
Q Consensus 208 ~~-------~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (535)
+. ...+...+.+.++.+.+.|.++.+|+++........+.....|...+..|...+|..++...+.+.+.+++
T Consensus 153 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~ 232 (449)
T PRK08044 153 GDRGIDNDFRDVNDWQFYKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAK 232 (449)
T ss_pred CcccccCCccCcCHHHHHHHHHHHHhcCCEEEEecCCHHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHH
Confidence 21 23467788899999999999999999998876655555677788888888888999999999999999999
Q ss_pred hcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCC
Q 009410 281 FVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI 360 (535)
Q Consensus 281 ~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv 360 (535)
..+.++|+.|++.....+.+..+++.|..+++++++|+++++++.+.. .+..++++||+|...+++++|+++..|.
T Consensus 233 ~~g~~vhi~HiSt~~~~~~i~~ak~~G~~it~e~~~h~L~l~~~~~~~----~~~~~k~~PPlr~~~d~~aL~~~l~~G~ 308 (449)
T PRK08044 233 VAGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEE----IGTLAKCSPPIRDLENQKGMWEKLFNGE 308 (449)
T ss_pred HhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEcChhhhcccHHHhhC----CCCcEEEcCCCCChHHHHHHHHHHhCCC
Confidence 999999999999988889999999999999999999999999988754 2578899999999999999999999999
Q ss_pred eEEEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCC
Q 009410 361 LQLVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGS 437 (535)
Q Consensus 361 ~~~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk 437 (535)
+.+++|||.|++...+. .+|+.+|+ |++..++.++..+++.++++++++++++|.|||++||+ ++.|+|++|+
T Consensus 309 id~i~sDH~P~~~~~K~---~~~~~~~~g~~g~e~~l~~~~~~~v~~~~l~~~~~v~~~s~npA~~lgl-~~~G~i~~G~ 384 (449)
T PRK08044 309 IDCLVSDHSPCPPEMKA---GNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGL-QQKGRIAPGK 384 (449)
T ss_pred ceEEEcCCCCCChHHcc---CChhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCC-CCCCcCCCCC
Confidence 99999999998876654 36777776 89999999998888888899999999999999999999 4479999999
Q ss_pred CccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEee
Q 009410 438 DADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIE 502 (535)
Q Consensus 438 ~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~ 502 (535)
+|||+++|.+..|.++++++.++..|+||+|+.+.++|.+||++|++||++++.+..++.|++++
T Consensus 385 ~ADlvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~t~~~G~~v~~~~~~~~~~~~G~~~~ 449 (449)
T PRK08044 385 DADFVFIQPNSSYVLKNEDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFIL 449 (449)
T ss_pred ccCEEEECCCCcEEECHHHccccCCCCCCCCCEEeeeEEEEEECCEEEEECCccccCCCCcccCC
Confidence 99999999999999999999999999999999999999999999999999998766666888764
No 11
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=100.00 E-value=1.7e-53 Score=441.41 Aligned_cols=438 Identities=30% Similarity=0.424 Sum_probs=367.9
Q ss_pred cEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHH
Q 009410 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~ 133 (535)
|++|+|++|+++++...++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+... +....+++.+..++
T Consensus 1 dl~i~~~~v~~~~~~~~~~v~I~~g~I~~i~~~~~~~~~~~~iDa~G~~v~PG~ID~H~H~~~~--~~~~~e~~~~~s~a 78 (447)
T cd01315 1 DLVIKNGRVVTPDGVREADIAVKGGKIAAIGPDIANTEAEEVIDAGGLVVMPGLIDTHVHINEP--GRTEWEGFETGTKA 78 (447)
T ss_pred CEEEECCEEECCCCceEeEEEEECCEEEEEeCCCCCCCCCeEEECCCCEEeccEeeceeccCCC--CccccccHHHHHHH
Confidence 4799999999987777899999999999999865434568999999999999999999999865 45566778888999
Q ss_pred HHhCCcEEEeccccC--CCCChHHHHHHHHHHhcc-cccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCC-
Q 009410 134 ALAGGTTMHIDFVIP--INGSLTAGFEAYEKKAKN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS- 209 (535)
Q Consensus 134 ~l~~GvTtv~d~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~- 209 (535)
++++||||++||... +.......++...+.... ..++++++.+.... ..++++++. +.|+.++|+++...+.
T Consensus 79 al~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~ei~~l~-~~G~~giKv~~~~~~~~ 154 (447)
T cd01315 79 AAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWGGLVPG---NLDQLRPLD-EAGVVGFKCFLCPSGVD 154 (447)
T ss_pred HHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEEeecCC---CHHHHHHHH-HcCCcEEEEEecccCCC
Confidence 999999999999621 122345555555554433 56666665543322 345566665 6799999998765332
Q ss_pred --CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 210 --FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 210 --~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
...+.+.+.++++.+++.|+++.+|++...............|..++..+...+|...+...+.+++.++++.+.++|
T Consensus 155 ~~~~~~~~~l~~~~~~a~~~g~~v~vH~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~~~~~~~la~~~g~~ih 234 (447)
T cd01315 155 EFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAKGKRDYRDYLASRPVFTEVEAIQRILLLAKETGCRLH 234 (447)
T ss_pred CcccCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHhHhhcCCCChHHhhccCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 235789999999999999999999999988777777666667777777777788999999999999999999999999
Q ss_pred EEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCC
Q 009410 288 VVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTD 367 (535)
Q Consensus 288 ~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD 367 (535)
+.|.++....+.++.+++.|..+++++++|+++++.+.+.. .+..+++.||+|...++.+++++++.|.+.+++||
T Consensus 235 i~h~s~~~~~~~i~~~~~~g~~i~~e~~~h~l~~~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~~i~SD 310 (447)
T cd01315 235 IVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPD----GGTEFKCAPPIRDAANQEQLWEALENGDIDMVVSD 310 (447)
T ss_pred EEeCCCHHHHHHHHHHHHCCCceEEEeccccEEEcHHHccC----CCCceEECCCCCChHHHHHHHHHHhCCceeEEeCC
Confidence 99999999889999999999999999999999999887753 35788999999999999999999999999999999
Q ss_pred CCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEE
Q 009410 368 HCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIF 444 (535)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvl 444 (535)
+.|.....+..+..+|+.++. |++..+..++..+++..+++++++++++|.|||+++|+++++|+|++|+.|||||+
T Consensus 311 h~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~pa~~~g~~~~~G~l~~g~~Ad~~v~ 390 (447)
T cd01315 311 HSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVNKRGLSLEDIARLMCENPAKLFGLSHQKGRIAVGYDADFVVW 390 (447)
T ss_pred CCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCccccCCCCCCEEEE
Confidence 999887666533346766665 88888888887777788899999999999999999999767899999999999999
Q ss_pred cCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEee
Q 009410 445 NPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIE 502 (535)
Q Consensus 445 d~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~ 502 (535)
|.+..+.++.+++.+...|+||+|..+.++|.+||++|++||++|+++..+ .|++++
T Consensus 391 d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~ti~~G~~v~~~~~~~~~~-~G~~~~ 447 (447)
T cd01315 391 DPEEEFTVDAEDLYYKNKISPYVGRTLKGRVHATILRGTVVYQDGEVVGEP-LGQLLL 447 (447)
T ss_pred cCCCCEEEcHHHccccCCCCCccCeEEeeeEEEEEECCEEEEECCeEccCC-CceEeC
Confidence 999999998888888899999999999999999999999999999999766 888874
No 12
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=100.00 E-value=1.3e-53 Score=439.96 Aligned_cols=433 Identities=30% Similarity=0.455 Sum_probs=365.9
Q ss_pred cEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHH
Q 009410 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~ 133 (535)
+++|+|++|+++++...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+... +...++++.+..++
T Consensus 1 dl~i~~~~v~~~~~~~~~~v~i~dg~I~~i~~~~~-~~~~~~id~~g~~v~PG~ID~H~H~~~~--~~~~~~~~~~~~~~ 77 (443)
T TIGR03178 1 DLIIRGGRVILPNGEREADVGVKGGKIAAIGPDIL-GPAAKIIDAGGLVVFPGVVDTHVHINEP--GRTEWEGFETGTRA 77 (443)
T ss_pred CEEEECcEEECCCCceEEEEEEECCEEEEeeCCCC-CCCCeEEECCCCEEeccEeccccccCCC--CccccchHHHHHHH
Confidence 47899999999887778999999999999987532 3467899999999999999999999875 55567788888899
Q ss_pred HHhCCcEEEeccc-cCCC-CChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCC-
Q 009410 134 ALAGGTTMHIDFV-IPIN-GSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS- 209 (535)
Q Consensus 134 ~l~~GvTtv~d~~-~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~- 209 (535)
++++||||++||. +..+ ......++...+... ...++++++.+... +..+++..+. +.|+..+|+|+++.+.
T Consensus 78 ~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~i~~~~-~~G~~~ik~~~~~~~~~ 153 (443)
T TIGR03178 78 AAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFWGGLVP---YNLDDLRELD-EAGVVGFKAFLSPSGDD 153 (443)
T ss_pred HHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCceeEEEEeccCC---CCHHHHHHHH-HCCCcEEEEEecccCCC
Confidence 9999999999996 2212 234445555544443 34666766544332 3355666666 7899999999865432
Q ss_pred --CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 210 --FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 210 --~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
...+.+.+.++++.+++.|+++..|+++........+.+...|..++..+...+|..++...+.+++++++..+.++|
T Consensus 154 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~ae~~~~~~~~~la~~~g~~vh 233 (443)
T TIGR03178 154 EFPHVDDWQLYKGMRELARLGQLLLVHAENPAITSALGEEAPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVTGCRVH 233 (443)
T ss_pred CcccCCHHHHHHHHHHHHhcCCeEEEeccChHHHHHHHHHHHhcCCCChhHhcCcCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 356789999999999999999999999887777776777888988888888889999999999999999999999999
Q ss_pred EEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCC
Q 009410 288 VVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTD 367 (535)
Q Consensus 288 ~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD 367 (535)
+.|.++.+..+.++.+++.|+.++++.++|+++++.+.+.. .+..+++.||+|...++.+++++++.|...+++||
T Consensus 234 i~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~SD 309 (443)
T TIGR03178 234 VVHLSSAEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPD----GGTLAKCAPPIRDLANQEGLWEALLNGLIDCVVSD 309 (443)
T ss_pred EEeCCCHHHHHHHHHHHHCCCcEEEEECccceEecHHHhhC----cCcceEEcCCCCChHHHHHHHHHHHcCCccEEeCC
Confidence 99999998889999999999999999999999999887743 35678999999999999999999999999999999
Q ss_pred CCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEE
Q 009410 368 HCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIF 444 (535)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvl 444 (535)
|.|+....+. ...|+.+|. |++..++.++..++..++++++++++++|.|||+++|+ ++.|+|++|+.|||||+
T Consensus 310 h~p~~~~~K~--~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~pA~~~g~-~~~G~l~~G~~Ad~vi~ 386 (443)
T TIGR03178 310 HSPCTPDLKR--AGDFFKAWGGIAGLQSTLDVMFDEAVQKRGLPLEDIARLMATNPAKRFGL-AQKGRIAPGKDADFVFV 386 (443)
T ss_pred CCCCChHHcC--cCChhhCCCCeeEHHHhHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHcCC-CCCCccCCCCcCCEEEE
Confidence 9998866552 135776766 88999998887777788899999999999999999999 56799999999999999
Q ss_pred cCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEe
Q 009410 445 NPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYI 501 (535)
Q Consensus 445 d~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~ 501 (535)
|.+..+.+++..+.+...|+||+|..+.++|.+||++|++||++|+++..+ .|+++
T Consensus 387 d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~-~g~~~ 442 (443)
T TIGR03178 387 DPDESYTLTPDDLYYRHKVSPYVGRTIGGRVRATYLRGQCIYDDEQFIGAP-KGQLL 442 (443)
T ss_pred cCCCcEEEcHHHhhhcCCCCCcCCcEEeeEEEEEEECCEEEEECCeeccCC-CCccc
Confidence 998899999888889999999999999999999999999999999998755 67765
No 13
>PRK07627 dihydroorotase; Provisional
Probab=100.00 E-value=2.2e-53 Score=432.33 Aligned_cols=415 Identities=21% Similarity=0.272 Sum_probs=336.2
Q ss_pred cEEEEccEEEcCCCc--eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHH
Q 009410 54 KILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~--~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~ 131 (535)
+++|+|++|+++.+. ..++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+..+ +....+++.+..
T Consensus 2 ~~~i~~~~v~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~iDa~g~~vlPG~iD~H~H~~~~--g~~~~e~~~t~s 79 (425)
T PRK07627 2 KIHIKGGRLIDPAAGTDRQADLYVAAGKIAAIGQAPAGFNADKTIDASGLIVCPGLVDLSARLREP--GYEYKATLESEM 79 (425)
T ss_pred eEEEEeeEEECCCCCccceeEEEEECCEEEEecCCCcCCCCCeEEECCCCEEeccEEeccccccCC--CccccCcHHHHH
Confidence 589999999987653 5789999999999998754323467899999999999999999999776 666788889999
Q ss_pred HHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-ccccccceeeeee-cCChhhHHHHHHHHHHcCCCEEEEEeecCC
Q 009410 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAIT-KWDEVVSDEMEVMVKEKGINSFKFFMAYKG 208 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~ 208 (535)
++++++||||+++|...... .....++....... ....++..+.... ....+...++..+. +.|+.++|.+ +
T Consensus 80 ~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~l~-~~G~~~fk~~----~ 154 (425)
T PRK07627 80 AAAVAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQAHVYPLGALTVGLKGEVLTEMVELT-EAGCVGFSQA----N 154 (425)
T ss_pred HHHHhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCceeEEEeCeEEcCCCccCHHHHHHHH-hCCEEEEEcC----C
Confidence 99999999999998654332 23333333333222 2233333333332 22344566777776 6788888753 2
Q ss_pred CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEE
Q 009410 209 SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (535)
Q Consensus 209 ~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (535)
....+...+.++++.+++.|.++.+|+++...... .....|......+...+|..+|..++.+++.+++..+.++|+
T Consensus 155 ~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~~~~~---~~~~~g~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi 231 (425)
T PRK07627 155 VPVVDTQVLLRALQYASTFGFTVWLRPLDAFLGRG---GVAASGAVASRLGLSGVPVAAETIALHTIFELMRVTGARVHL 231 (425)
T ss_pred cccCCHHHHHHHHHHHHhcCCEEEEecCChhhhhC---CCcCCCHhHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEE
Confidence 23467888999999999999999999998744221 111122223334455689999999999999999999999999
Q ss_pred EEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCC
Q 009410 289 VHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (535)
Q Consensus 289 ~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~ 368 (535)
.|.++...++.++.+++.|++|++++++||++++.+.+.. .+..++++||+|...+++++++++++|...+++|||
T Consensus 232 ~HvSs~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~~~~----~~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~SDH 307 (425)
T PRK07627 232 ARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDVDIGY----FDSQFRLDPPLRSQRDREAIRAALADGTIDAICSDH 307 (425)
T ss_pred EeCCCHHHHHHHHHHHHCCCCeEEEeccchheEeHhHHhc----cCCceEEeCCCCCHHHHHHHHHHHhcCCCcEEEcCC
Confidence 9999999999999999999999999999999999887743 346899999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEc
Q 009410 369 CAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 445 (535)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld 445 (535)
+|+....+. .+|..+|. |++..+++++... ...+++++++++++|.|||+++|+ +.|+|++|+.||||++|
T Consensus 308 aP~~~~~k~---~~~~~~~~G~~g~e~~~pl~~~~~-~~~~i~~~~~l~~~t~~pA~~lg~--~~G~l~~G~~ADlvv~d 381 (425)
T PRK07627 308 TPVDDDEKL---LPFAEATPGATGLELLLPLTLKWA-DEAKVPLARALARITSAPARVLGL--PAGRLAEGAPADLCVFD 381 (425)
T ss_pred CCCCHHHcc---CCHhhCCCCceeHHHHHHHHHHHH-HhCCCCHHHHHHHHHHHHHHHhCC--CCCcccCCCcCCEEEEC
Confidence 999766654 37888886 8888888777544 456799999999999999999999 46999999999999999
Q ss_pred CCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC
Q 009410 446 PNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 446 ~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~ 488 (535)
.+..|.++++++.+...|+||+|..+.++|.+||++|++||++
T Consensus 382 ~~~~~~v~~~~~~s~~~~sp~~g~~~~g~v~~t~v~G~~v~~~ 424 (425)
T PRK07627 382 PDAHWRVEPRALKSQGKNTPFLGYELPGRVRATLVAGQVAFER 424 (425)
T ss_pred CCCcEEEChhhccccCCCCCCcCCEeeeEEEEEEECCEEEeec
Confidence 9999999999999999999999999999999999999999986
No 14
>PRK07369 dihydroorotase; Provisional
Probab=100.00 E-value=1.7e-52 Score=424.43 Aligned_cols=408 Identities=24% Similarity=0.350 Sum_probs=344.8
Q ss_pred ccEEEEccEEEcCCCc--eeeeEEEeCCEEEEeeCCCCC-CCCceEEecCCCEEeecccccccccccccCCCCchhhhHH
Q 009410 53 SKILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINV-GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~--~~~~I~I~~G~I~~Vg~~~~~-~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~ 129 (535)
.+++|+|++|+++.+. ..++|+|+||+|++|+++... +.+.++||++|++|+|||||+|+|+..+ +....+++.+
T Consensus 2 ~~~~i~n~~v~d~~~~~~~~~~v~I~dg~I~~i~~~~~~~~~~~~~iDa~G~~vlPG~ID~H~H~~~~--~~~~~e~~~s 79 (418)
T PRK07369 2 SNELLQQVRVLDPVSNTDRIADVLIEDGKIQAIEPHIDPIPPDTQIIDASGLILGPGLVDLYSHSGEP--GFEERETLAS 79 (418)
T ss_pred CCEEEeCeEEECCCCCcccceeEEEECCEEEEecCCcccCCCCCEEEECCCCEEecCEEecccccCCC--CcCCCccHHH
Confidence 4689999999986543 678999999999999876432 3467899999999999999999999877 6677889999
Q ss_pred HHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-ccccccceeeeeecCC-hhhHHHHHHHHHHcCCCEEEEEeec
Q 009410 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWD-EVVSDEMEVMVKEKGINSFKFFMAY 206 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (535)
..++++++||||++||.+..+. ...+.++...+... ...+++.++...+... ++...++..+. +.|+..+|.
T Consensus 80 ~~~aa~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~ei~~l~-~~Gv~~f~~---- 154 (418)
T PRK07369 80 LAAAAAAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPPVQLHFWGALTLGGQGKQLTELAELA-AAGVVGFTD---- 154 (418)
T ss_pred HHHHHHhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCceeEEEEEEEeeCCCCccHhhHHHHH-HCCCEEEEC----
Confidence 9999999999999999754333 45566665555543 4577888887775442 34566777765 678877762
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCE
Q 009410 207 KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (535)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (535)
+....+...+.++++.+.+.|.++.+|+++....... +...|......+...+|..+|..++.+++.+++..+.++
T Consensus 155 -~~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l~~~~---~~~~g~~~~~~~~~~~p~~aE~~av~r~~~la~~~~~~~ 230 (418)
T PRK07369 155 -GQPLENLALLRRLLEYLKPLGKPVALWPCDRSLAGNG---VMREGLLALRLGLPGDPASAETTALAALLELVAAIGTPV 230 (418)
T ss_pred -CCcCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhcC---cccCChhHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcE
Confidence 1223467789999999999999999999988754322 233344445556667899999999999999999999999
Q ss_pred EEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeC
Q 009410 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (535)
Q Consensus 287 ~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgt 366 (535)
|+.|.++.+.++.++.+++.|+.|++++++||++++.+.+.. .+..++++||+|...+++++|+++++|...+++|
T Consensus 231 hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~phhL~l~~~~~~~----~~~~~kv~PPLR~~~d~~aL~~~l~~G~Id~i~S 306 (418)
T PRK07369 231 HLMRISTARSVELIAQAKARGLPITASTTWMHLLLDTEALAS----YDPNLRLDPPLGNPSDRQALIEGVRTGVIDAIAI 306 (418)
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCeEEEecHHHHhccHHHHhc----cCCCcEECCCCCCHHHHHHHHHHHhcCCCCEEEc
Confidence 999999999999999999999999999999999999987743 2467899999999999999999999999999999
Q ss_pred CCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEE
Q 009410 367 DHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIII 443 (535)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvv 443 (535)
||+|++...+.. +|+.+|+ |++..++.+++.+++.++++++++++++|.|||++||+. .|+|++|++|||++
T Consensus 307 DHaP~~~~~K~~---~~~~~~~G~~G~e~~l~~~~~~~v~~~~i~l~~~v~~~s~nPA~~lgl~--~G~i~~G~~ADlvi 381 (418)
T PRK07369 307 DHAPYTYEEKTV---AFAEAPPGAIGLELALPLLWQNLVETGELSALQLWQALSTNPARCLGQE--PPSLAPGQPAELIL 381 (418)
T ss_pred CCCCCCHHHccC---CHhHCCCCceeHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCC--cCcccCCCcCCEEE
Confidence 999999887753 6888876 999999999988888889999999999999999999994 49999999999999
Q ss_pred EcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEE
Q 009410 444 FNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIA 480 (535)
Q Consensus 444 ld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~ 480 (535)
+|.+..|.++.+++.+...|+||+|+.+.++|.+||+
T Consensus 382 ~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~t~~ 418 (418)
T PRK07369 382 FDPQKTWTVSAQTLHSLSRNTPWLGQTLKGRVLQTWV 418 (418)
T ss_pred EcCCCCEEECcccccCCCCCCCCCCCEeeeEEEEEEC
Confidence 9999999999999999999999999999999999985
No 15
>PRK09059 dihydroorotase; Validated
Probab=100.00 E-value=4.7e-52 Score=423.13 Aligned_cols=417 Identities=22% Similarity=0.325 Sum_probs=343.3
Q ss_pred CcccEEEEccEEEcCCCc--eeeeEEEeCCEEEEeeCCCC---CCCCceEEecCCCEEeecccccccccccccCCCCchh
Q 009410 51 SSSKILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNIN---VGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETID 125 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~~--~~~~I~I~~G~I~~Vg~~~~---~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~ 125 (535)
|+.+++|+|++|+++++. .+++|+|+||+|++|++... .+.+.++||++|++|+|||||+|+|+... +....+
T Consensus 1 ~~~~~~i~n~~v~~~~~~~~~~~~v~I~~G~I~~i~~~~~~~~~~~~~~viDa~G~~v~PG~ID~HvH~~~~--~~~~~e 78 (429)
T PRK09059 1 MMRPILLANARIIDPSRGLDEIGTVLIEDGVIVAAGKGAGNQGAPEGAEIVDCAGKAVAPGLVDARVFVGEP--GAEHRE 78 (429)
T ss_pred CCcCEEEEeeEEECCCCCcccceEEEEECCEEEEecCccccccCCCCCeEEECCCCEEeccEEecccccCCC--Cchhhh
Confidence 456799999999997764 47899999999999987532 23457899999999999999999999765 555678
Q ss_pred hhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcc-cccccceeeeeecC-ChhhHHHHHHHHHHcCCCEEEE
Q 009410 126 DFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITKW-DEVVSDEMEVMVKEKGINSFKF 202 (535)
Q Consensus 126 ~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ik~ 202 (535)
.+....+.++++||||+++|....+. ...+.++........ ..+++.++...... ..+...++..+. +.|+..++.
T Consensus 79 ~~~~~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~-~~Gv~~f~~ 157 (429)
T PRK09059 79 TIASASRAAAAGGVTSIIMMPDTDPVIDDVALVEFVKRTARDTAIVNIHPAAAITKGLAGEEMTEFGLLR-AAGAVAFTD 157 (429)
T ss_pred hHHHHHHHHHhCCcEEEEeccCCCCCCCCHHHHHHHHHHhcccCcccEEEEeEEecCCCCcchHHHHHHH-hcCcEEEec
Confidence 88888899999999999999754332 344556655555543 46788777766553 344566666665 667766652
Q ss_pred EeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhc
Q 009410 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV 282 (535)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (535)
.+....+...+.++++.+++.|.++.+|+++........ ...|..+...+...+|..+|..++.+++.+++..
T Consensus 158 ----~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~---~~~~~~~~~~~~~~rP~~aE~~av~r~~~la~~~ 230 (429)
T PRK09059 158 ----GRRSVANTQVMRRALTYARDFDAVIVHETRDPDLGGNGV---MNEGLFASWLGLSGIPREAEVIPLERDLRLAALT 230 (429)
T ss_pred ----CCcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhcCCC---cCCcHHHHHcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 122234667788999999999999999999876533111 1111112233445689999999999999999999
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeE
Q 009410 283 NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQ 362 (535)
Q Consensus 283 ~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~ 362 (535)
+.++|+.|.++....+.++.+++.|++|++++++||++++.+.+.. .+..++++||+|...++.++++.+.+|...
T Consensus 231 ~~~~hi~hvs~~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~----~~~~~kvnPPLR~~~d~~~L~~~l~~g~id 306 (429)
T PRK09059 231 RGRYHAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLNENDIGE----YRTFFKLSPPLRTEDDRVAMVEAVASGTID 306 (429)
T ss_pred CCcEEEEecCCHHHHHHHHHHHHCCCCEEEeecHHHHhccHHHHhc----cCCccEEcCCCCCHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999999999999999999999887743 346889999999999999999999999999
Q ss_pred EEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCc
Q 009410 363 LVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDA 439 (535)
Q Consensus 363 ~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~A 439 (535)
+++|||.|++...+.. +|+.+|+ |++..++.++ .++..++++++++++++|.|||++||+ + .|+|++|++|
T Consensus 307 ~i~sDh~p~~~~~K~~---~~~~~~~G~~gle~~l~~~~-~~v~~~~l~l~~~~~~~s~nPA~~~gl-~-~G~l~~G~~A 380 (429)
T PRK09059 307 IIVSSHDPQDVDTKRL---PFSEAAAGAIGLETLLAAAL-RLYHNGEVPLLRLIEALSTRPAEIFGL-P-AGTLKPGAPA 380 (429)
T ss_pred EEEeCCCCCCHHHCcC---ChhhCCCCcccHHHHHHHHH-HHHHcCCCCHHHHHHHHhHHHHHHhCC-C-cCcccCCCcC
Confidence 9999999999887653 6887876 9999999888 467778899999999999999999999 3 5999999999
Q ss_pred cEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEE
Q 009410 440 DIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 487 (535)
Q Consensus 440 Dlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~ 487 (535)
|||++|.+..|.++++++.++..|+||+|+.+.++|.+||++|++||+
T Consensus 381 Dlvl~d~~~~~~v~~~~~~s~~~~sPf~G~~l~G~v~~ti~~G~~v~~ 428 (429)
T PRK09059 381 DIIVIDLDEPWVVDPEDLKSRSKNTPFEEARFQGRVVRTIVAGKTVYE 428 (429)
T ss_pred CEEEECCCCCEEECcccCccCCCCCCCCCCEEeeEEEEEEECCEEEee
Confidence 999999999999999999999999999999999999999999999985
No 16
>PRK09236 dihydroorotase; Reviewed
Probab=100.00 E-value=3.7e-51 Score=421.09 Aligned_cols=432 Identities=25% Similarity=0.357 Sum_probs=348.9
Q ss_pred ccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHH
Q 009410 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~ 132 (535)
.+++|+|++|++++....++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+ +....+.+.+..+
T Consensus 2 ~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~ID~HvH~~~~--~~~~~e~~~~~~~ 79 (444)
T PRK09236 2 KRILIKNARIVNEGKIFEGDVLIENGRIAKIASSISAKSADTVIDAAGRYLLPGMIDDQVHFREP--GLTHKGDIASESR 79 (444)
T ss_pred ccEEEECCEEEcCCCceEeEEEEECCEEEEecCCCCCCCCCeEEECCCCEECCCEEEcccccccC--cccccccHHHHHH
Confidence 45899999999976666789999999999998764333457899999999999999999998765 4455677888889
Q ss_pred HHHhCCcEEEeccccCCCC-ChHHHHHHHHHHh-cccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecC-CC
Q 009410 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK-GS 209 (535)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~-~~ 209 (535)
.++++||||++||....+. ...+.+....... ....++++++.+... +..+++..+. +.|+.++|+|.... +.
T Consensus 80 aa~~~GvTtv~d~p~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~e~~~l~-~~g~~g~k~~~~~~~~~ 155 (444)
T PRK09236 80 AAVAGGITSFMEMPNTNPPTTTLEALEAKYQIAAQRSLANYSFYFGATN---DNLDEIKRLD-PKRVCGVKVFMGASTGN 155 (444)
T ss_pred HHHhCCcEEEEeCCCCCCCcCcHHHHHHHHHHhccCeEEEEEEEeccCc---ccHHHHHHHH-HccCcEEEEEeccCCCC
Confidence 9999999999999754322 3344444434433 345677777664432 2355666665 56889999987532 22
Q ss_pred C-cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHc-CCC-CcccccccCChhhHHHHHHHHHHHHHhcCCCE
Q 009410 210 F-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIEL-GIT-GPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (535)
Q Consensus 210 ~-~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (535)
. ..+.+.++++++ ..+.++.+|+++..........+... |.. ....|...+|..++..++.+++++++..+.++
T Consensus 156 ~~~~~~~~~~~~~~---~~~~~v~~H~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~rp~~ae~~av~~~~~la~~~~~~~ 232 (444)
T PRK09236 156 MLVDNPETLERIFR---DAPTLIATHCEDTPTIKANLAKYKEKYGDDIPAEMHPLIRSAEACYKSSSLAVSLAKKHGTRL 232 (444)
T ss_pred cccCcHHHHHHHHH---hcCCEEEEecCCHHHHHHHHHHHHHhcCCCCChhhccccCCHHHHHHHHHHHHHHHHHHCCCE
Confidence 2 234556666654 44899999998876655444444333 532 44566667899999999999999999999999
Q ss_pred EEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeC
Q 009410 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (535)
Q Consensus 287 ~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgt 366 (535)
|+.|.++..+.+.+...+..|..++++.++|+++++++.+.. .+..++++||+|...++.++++++++|+++.+||
T Consensus 233 hi~h~st~~~~~~i~~~~~~g~~vt~e~~~H~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~igt 308 (444)
T PRK09236 233 HVLHISTAKELSLFENGPLAEKRITAEVCVHHLWFDDSDYAR----LGNLIKCNPAIKTASDREALRQALADDRIDVIAT 308 (444)
T ss_pred EEEeCCCHHHHHHHHHHHHCCCCEEEEEchhhhhcCHHHHhc----cCceEEECCCCCCHHHHHHHHHHHhCCCCcEEEC
Confidence 999999999888888888889999999999999999887753 3578999999999999999999999999999999
Q ss_pred CCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEE
Q 009410 367 DHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIII 443 (535)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvv 443 (535)
||.|.....+.. +|..+|. +++..++.+++ .+..++++++++++++|.|||++||+ ++.|+|++|+.|||||
T Consensus 309 Dh~p~~~~~k~~---~~~~~~~G~~~~e~~l~~l~~-~v~~~~~~~~~~~~~~t~~pA~~lgl-~~~G~l~~G~~ADlvi 383 (444)
T PRK09236 309 DHAPHTWEEKQG---PYFQAPSGLPLVQHALPALLE-LVHEGKLSLEKVVEKTSHAPAILFDI-KERGFIREGYWADLVL 383 (444)
T ss_pred CCCCCCHHHhcC---CcccCCCCcccHHHHHHHHHH-HHHhcCCCHHHHHHHHHHhHHHhcCC-CCCCccccCCcCCEEE
Confidence 999987666543 6777776 77888888884 56667799999999999999999999 4579999999999999
Q ss_pred EcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeec
Q 009410 444 FNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM 503 (535)
Q Consensus 444 ld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~ 503 (535)
+|.+.++.++.+++.+...|+||+|..+.++|.+||++|++||++|+++... .|+++++
T Consensus 384 ~d~~~~~~~~~~~~~s~~~~sp~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~-~G~~~~~ 442 (444)
T PRK09236 384 VDLNSPWTVTKENILYKCGWSPFEGRTFRSRVATTFVNGQLVYHNGQLVESC-RGQRLEF 442 (444)
T ss_pred EcCCCCEEEchHHhcccCCCCCCCCCEEeeeEEEEEECCEEEEECCEEccCc-CceEeec
Confidence 9999999999999999999999999999999999999999999999999766 8999984
No 17
>PRK07575 dihydroorotase; Provisional
Probab=100.00 E-value=5.9e-51 Score=418.02 Aligned_cols=427 Identities=26% Similarity=0.390 Sum_probs=339.9
Q ss_pred CcccEEEEccEEEcCCC-ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHH
Q 009410 51 SSSKILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~-~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~ 129 (535)
|+++++|+|++|+++++ ...++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+... +...+++++.
T Consensus 1 ~~~~~~i~~~~i~~~~~~~~~~~I~I~dg~I~~ig~~~~~~~~~~vid~~g~~v~PG~ID~H~H~~~~--~~~~~e~~~~ 78 (438)
T PRK07575 1 MMMSLLIRNARILLPSGELLLGDVLVEDGKIVAIAPEISATAVDTVIDAEGLTLLPGVIDPQVHFREP--GLEHKEDLFT 78 (438)
T ss_pred CcceEEEECCEEECCCCCEEeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEcccEEEeeeccCCC--CCcCcchHHH
Confidence 35678999999998765 46789999999999999754323236899999999999999999998765 5668889999
Q ss_pred HHHHHHhCCcEEEeccccCCCC-ChHHHHHH-HHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecC
Q 009410 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEA-YEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK 207 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~ 207 (535)
..+.++++||||++||....+. ...+.+.. .........++++++.+... +...++.. ..+..++|.|....
T Consensus 79 ~~~aa~~gGvTt~~dmp~~~p~~~~~~~~~~~~~~a~~~~~v~~~~~~~~~~---~~l~~l~~---~~~~~g~~~f~~~~ 152 (438)
T PRK07575 79 ASRACAKGGVTSFLEMPNTKPLTTTQAALDDKLARAAEKCVVNYGFFIGATP---DNLPELLT---ANPTCGIKIFMGSS 152 (438)
T ss_pred HHHHHHhCCEEEEEECCCCCCCCCcHHHHHHHHHHhccCcEEEEEEEccccc---cCHHHHHH---hhCCeEEEEEEeeC
Confidence 9999999999999999653322 23333433 33333456778877755542 22333332 23677888876322
Q ss_pred -CCC-cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCC
Q 009410 208 -GSF-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285 (535)
Q Consensus 208 -~~~-~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (535)
+.. ..+...+++++. ..+.++..|+++........ ....|...+..|...+|..+|...+.+.+++++..+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~---~~~~~v~~h~e~~~l~~~~~--~~~~g~~~~~~~~~~~p~~aE~~av~~~~~la~~~g~~ 227 (438)
T PRK07575 153 HGPLLVDEEAALERIFA---EGTRLIAVHAEDQARIRARR--AEFAGISDPADHSQIQDEEAALLATRLALKLSKKYQRR 227 (438)
T ss_pred CCCcccCcHHHHHHHHH---hCCCEEEEeCcChHHHHhhh--HhhccCcCcccccccCcHHHHHHHHHHHHHHHHHHCCC
Confidence 111 123444455433 56889999999876433222 22345556666777789999999999999999999999
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEe
Q 009410 286 LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVG 365 (535)
Q Consensus 286 ~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lg 365 (535)
+|+.|+++.+..+.+...+ +..++++++++|++++++.+.. .+..++++||+|...++.++++++++|++++++
T Consensus 228 lhi~HiSt~~~v~~i~~~k--~~~vt~ev~phhL~l~~~~~~~----~~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~ 301 (438)
T PRK07575 228 LHILHLSTAIEAELLRQDK--PSWVTAEVTPQHLLLNTDAYER----IGTLAQMNPPLRSPEDNEALWQALRDGVIDFIA 301 (438)
T ss_pred EEEEECCCHHHHHHHHHhc--CCCEEEEEchhhheeCHHHHhC----CCceEEEeCCCCCHHHHHHHHHHHhCCCCCEEe
Confidence 9999999988877777554 4789999999999999988753 347899999999999999999999999999999
Q ss_pred CCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEE
Q 009410 366 TDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADII 442 (535)
Q Consensus 366 tD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlv 442 (535)
|||.|++...+.. +|+..|. |+++.++++++.. ..+++|++++++++|.|||++||+ ++.|+|++|++||||
T Consensus 302 sDh~p~~~~~k~~---~~~~~~~G~~g~e~~l~~l~~~~-~~~~lsl~~~~~~~s~npAk~lgl-~~~G~L~~G~~ADlv 376 (438)
T PRK07575 302 TDHAPHTLEEKAQ---PYPNSPSGMPGVETSLPLMLTAA-MRGKCTVAQVVRWMSTAVARAYGI-PNKGRIAPGYDADLV 376 (438)
T ss_pred cCCCCCCHHHccC---CcccCCCCcccHHHHHHHHHHHH-hcCCCCHHHHHHHHhhhHHHHcCC-CCCCccCCCCcCCEE
Confidence 9999998777653 6777765 8899999999664 566799999999999999999999 456999999999999
Q ss_pred EEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEee
Q 009410 443 IFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIE 502 (535)
Q Consensus 443 vld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~ 502 (535)
|+|.+.++.++.+++.+...|+||+|..+.++|..||++|++||++|+++. ++.|++++
T Consensus 377 i~D~~~~~~v~~~~~~s~~~~sp~~g~~~~G~v~~tiv~G~~v~~~g~~~~-~~~G~~~~ 435 (438)
T PRK07575 377 LVDLNTYRPVRREELLTKCGWSPFEGWNLTGWPVTTIVGGQIVFDRGQVNT-EVRGQALT 435 (438)
T ss_pred EEcCCCCEEEchHHccccCCCCCCCCCEEeeEEEEEEECCEEEEECCEEcc-CCCceEee
Confidence 999999999999999999999999999999999999999999999999986 55899887
No 18
>PRK09060 dihydroorotase; Validated
Probab=100.00 E-value=1.2e-50 Score=415.99 Aligned_cols=429 Identities=27% Similarity=0.367 Sum_probs=347.0
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHH
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~ 131 (535)
.++++|+|++|++++....++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+... +....+.+.+..
T Consensus 4 ~~d~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~-~~~~~~iD~~G~~v~PG~ID~HvH~~~~--~~~~~e~~~t~~ 80 (444)
T PRK09060 4 TFDLILKGGTVVNPDGEGRADIGIRDGRIAAIGDLSG-ASAGEVIDCRGLHVLPGVIDSQVHFREP--GLEHKEDLETGS 80 (444)
T ss_pred cCcEEEECCEEECCCCCeeeEEEEECCEEEEecCCCC-CCCceEEECCCCEEccCEEeccccccCC--CCCccchHHHHH
Confidence 4678999999999877777999999999999986543 2346899999999999999999998766 566778899999
Q ss_pred HHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecC--
Q 009410 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK-- 207 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~-- 207 (535)
++++++||||+++|...... ...+.+....+... ...++++++......+. .++.++....|+.++|.|+++.
T Consensus 81 ~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~~---~~l~el~~~~gv~g~k~fm~~~~~ 157 (444)
T PRK09060 81 RAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMHCDFAFYVGGTRDNA---DELAELERLPGCAGIKVFMGSSTG 157 (444)
T ss_pred HHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccceeeEEEEeccCCCCH---HHHHHHHhhcCceEEEEEeccCCC
Confidence 99999999999999643322 44555555444443 36777777765443332 3444444345888899887542
Q ss_pred CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 208 GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 208 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
.....+...+.+++.. .+..+.+|+++....... ..+...| .+..|...+|..++...+.+++.+++..+.++|
T Consensus 158 ~~~~~d~~~l~~~~~~---~~~~v~~H~E~~~l~~~~-~~~~~~g--~~~~~~~~~p~~aE~~av~~~~~la~~~~~~lh 231 (444)
T PRK09060 158 DLLVEDDEGLRRILRN---GRRRAAFHSEDEYRLRER-KGLRVEG--DPSSHPVWRDEEAALLATRRLVRLARETGRRIH 231 (444)
T ss_pred CcccCCHHHHHHHHHh---CCCeEEEECCCHHHHHHH-HHHHhcC--CcccccccCCHHHHHHHHHHHHHHHHHHCCCEE
Confidence 1223456667777654 488999999988765543 4444556 555666778999999999999999999999999
Q ss_pred EEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCccc-ccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeC
Q 009410 288 VVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSW-LWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (535)
Q Consensus 288 ~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgt 366 (535)
+.|.++.+.++.++..++ .+++++++|+++++.+. +.. .+..+++.||+|...++.++++++++|+..+++|
T Consensus 232 i~h~st~~~v~~i~~~~~---~vt~ev~ph~l~l~~~~~~~~----~~~~~k~~PPlr~~~~~~~l~~al~~G~id~i~s 304 (444)
T PRK09060 232 VLHVSTAEEIDFLADHKD---VATVEVTPHHLTLAAPECYER----LGTLAQMNPPIRDARHRDGLWRGVRQGVVDVLGS 304 (444)
T ss_pred EEeCCCHHHHHHHHHhCC---CeEEEeChHHhccCchhhccc----CCceEEEeCCCCCHHHHHHHHHHHhCCCccEEec
Confidence 999999877666654443 48999999999998876 432 3468899999999999999999999999999999
Q ss_pred CCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEE
Q 009410 367 DHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIII 443 (535)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvv 443 (535)
||.|+....+.. +|..+|. |++..+++++. .+..+.++++++++++|.|||++||+ +++|+|++|+.|||||
T Consensus 305 Dh~p~~~~~k~~---~~~~~~~G~~g~e~~~~l~~~-~v~~g~l~~~~~~~~~s~~pa~~~gl-~~~G~l~~G~~ADlvl 379 (444)
T PRK09060 305 DHAPHTLEEKAK---PYPASPSGMTGVQTLVPIMLD-HVNAGRLSLERFVDLTSAGPARIFGI-AGKGRIAVGYDADFTI 379 (444)
T ss_pred CCCCCCHHHhcC---CcccCCCCcccHHHHHHHHHH-HHHcCCCCHHHHHHHHhHhHHHHhCC-CCCCcccCCCcCCEEE
Confidence 999998777643 6777765 88888888884 57777899999999999999999999 5679999999999999
Q ss_pred EcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCC
Q 009410 444 FNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRP 505 (535)
Q Consensus 444 ld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~ 505 (535)
+|.+..+.++.+++.++..|+||+|..+.++|.+||++|++||++|+++. ...|+++++..
T Consensus 380 ~d~~~~~~v~~~~~~s~~~~sp~~g~~l~g~~~~tiv~G~~v~~~g~~~~-~~~G~~~~~~~ 440 (444)
T PRK09060 380 VDLKRRETITNEWIASRCGWTPYDGKEVTGWPVGTIVRGQRVMWDGELVG-PPTGEPVRFLE 440 (444)
T ss_pred EcCCCCEEEChHHhcccCCCCCCCCCEEeeeEEEEEECCEEEEECCEEcc-CCCccCccccc
Confidence 99999999999999999999999999999999999999999999999997 45899988654
No 19
>PRK02382 dihydroorotase; Provisional
Probab=100.00 E-value=7.6e-51 Score=418.67 Aligned_cols=427 Identities=28% Similarity=0.441 Sum_probs=348.0
Q ss_pred ccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHH
Q 009410 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~ 132 (535)
.+++|+|++|++......++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+... +....+.+....+
T Consensus 2 ~dl~i~n~~v~~~~~~~~~~v~I~dg~I~~i~~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~--g~~~~e~~~~~~~ 79 (443)
T PRK02382 2 RDALLKDGRVYYNNSLQPRDVRIDGGKITAVGKDLDGSSSEEVIDARGMLLLPGGIDVHVHFREP--GYTHKETWYTGSR 79 (443)
T ss_pred ceEEEECCEEEeCCCceEEEEEEECCEEEEecCCCCCCCCCeEEECCCCEEcCCEeeeeeeccCC--CCCchhhHHHHHH
Confidence 57999999999866667899999999999998654333457899999999999999999998766 5556678888899
Q ss_pred HHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEE-EEEeecC-C
Q 009410 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSF-KFFMAYK-G 208 (535)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i-k~~~~~~-~ 208 (535)
+++++||||++++....+. ...+.++....... ...++++++.... +..+++..+. +.|+..+ |++..+. +
T Consensus 80 aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~~~~~----~~~~~l~~l~-~~gv~~~gkv~~~~~~~ 154 (443)
T PRK02382 80 SAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSIVDFGINGGVT----GNWDPLESLW-ERGVFALGEIFMADSTG 154 (443)
T ss_pred HHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCceEEEEEEeeec----cchhhHHHHH-hcCccceeEEEEEecCC
Confidence 9999999999999654333 34444554444433 3455665553322 1234566666 4577777 7776542 3
Q ss_pred CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEE
Q 009410 209 SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (535)
Q Consensus 209 ~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (535)
....+.+.+.++++.+++.|+++.+|+++......... ...|...+..|...+|..+|..++.+++.+++..+.++|+
T Consensus 155 ~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~--~~~g~~~~~~~~~~~p~~~E~~av~~~~~la~~~g~~~hi 232 (443)
T PRK02382 155 GMGIDEELFEEALAEAARLGVLATVHAEDEDLFDELAK--LLKGDADADAWSAYRPAAAEAAAVERALEVASETGARIHI 232 (443)
T ss_pred CcccCHHHHHHHHHHHHhcCCeEEEecCCHHHHHHhhH--hhcCCCCHhhCCCcCCHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 34567889999999999999999999998765432221 1235555666667789999999999999999999999999
Q ss_pred EEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCC
Q 009410 289 VHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (535)
Q Consensus 289 ~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~ 368 (535)
.|.++...++.+..+ . |++++++|+++++++.+.. .+..++++||+|...++.++++.+++|...+++|||
T Consensus 233 ~h~ss~~~~~~i~~~---~--vt~ev~ph~L~l~~~~~~~----~~~~~k~~PPlr~~~d~~aL~~~l~~g~i~~i~sDh 303 (443)
T PRK02382 233 AHISTPEGVDAARRE---G--ITCEVTPHHLFLSRRDWER----LGTFGKMNPPLRSEKRREALWERLNDGTIDVVASDH 303 (443)
T ss_pred EECCCHHHHHHHHHC---C--cEEEEchhhhhcCHHHHhc----cCceEEEcCCCCChHHHHHHHHHHhCCCCCEEEcCC
Confidence 999998876666543 2 8999999999999887743 236778999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEc
Q 009410 369 CAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 445 (535)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld 445 (535)
.|++...+.. +|+.+|+ |++..++.++ ..+..++++++++++++|.|||++||+ ++.|+|++|+.|||+++|
T Consensus 304 ~P~~~~~K~~---~~~~~~~G~~g~e~~~~~~~-~~~~~~~~~l~~~~~~~t~~pA~~~g~-~~~G~l~~G~~AD~vi~d 378 (443)
T PRK02382 304 APHTREEKDA---DIWDAPSGVPGVETMLPLLL-AAVRKNRLPLERVRDVTAANPARIFGL-DGKGRIAEGYDADLVLVD 378 (443)
T ss_pred CCCCHHHhcC---ChhhCCCCcccHHHHHHHHH-HHHHcCCCCHHHHHHHHhHHHHHHcCC-CCCCccCCCCcCCEEEEc
Confidence 9998877754 6888876 8899999988 577788899999999999999999999 478999999999999999
Q ss_pred CCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeec
Q 009410 446 PNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM 503 (535)
Q Consensus 446 ~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~ 503 (535)
.+..+.++.+.+.+...|+||+|.... .|.+||++|++||++|+++...+.|+++++
T Consensus 379 ~~~~~~~~~~~~~s~~~~sp~~g~~~~-~v~~tiv~G~~v~~~~~~~~~~~~G~~~~~ 435 (443)
T PRK02382 379 PDAAREIRGDDLHSKAGWTPFEGMEGV-FPELTMVRGTVVWDGDDINAKRGRGEFLRG 435 (443)
T ss_pred CCCcEEEcHHHhcccCCCCCcCCCEec-eEEEEEECCEEEEECCEEecCCCCceEeCC
Confidence 999999999999999999999998766 899999999999999999987778999987
No 20
>PRK09357 pyrC dihydroorotase; Validated
Probab=100.00 E-value=1e-49 Score=409.93 Aligned_cols=415 Identities=27% Similarity=0.416 Sum_probs=334.7
Q ss_pred cEEEEccEEEcCCC-ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHH
Q 009410 54 KILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (535)
Q Consensus 54 ~~vi~n~~vi~~~~-~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~ 132 (535)
+++|+|++|+++++ ..+++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+... +....+.+....+
T Consensus 2 ~~~i~~~~v~~~~~~~~~~~I~I~dg~I~~i~~~~~-~~~~~~iD~~g~~v~PG~ID~H~H~~~~--~~~~~e~~~~~~~ 78 (423)
T PRK09357 2 MILIKNGRVIDPKGLDEVADVLIDDGKIAAIGENIE-AEGAEVIDATGLVVAPGLVDLHVHLREP--GQEDKETIETGSR 78 (423)
T ss_pred cEEEEeEEEECCCCCcceeeEEEECCEEEEeeCCCC-CCCCeEEECCCCEEeCCEEecccccCCC--CccccccHHHHHH
Confidence 48999999998753 468999999999999986522 3357899999999999999999998765 5567788888899
Q ss_pred HHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcc-cccccceeeeeecC-ChhhHHHHHHHHHHcCCCEEEEEeecCCC
Q 009410 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITKW-DEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (535)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (535)
.++++||||++|+....+. .....++...+.... ...++..+...... ..+..+++..+. ..|+..++ .++.
T Consensus 79 ~a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~~~~----~~~~ 153 (423)
T PRK09357 79 AAAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGAITKGLAGEELTEFGALK-EAGVVAFS----DDGI 153 (423)
T ss_pred HHHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEEeCCCCccHHHHHHHH-hCCcEEEE----CCCc
Confidence 9999999999999743332 445555555554433 34555554433221 223345555554 44554433 2344
Q ss_pred CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEE
Q 009410 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (535)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (535)
...+.+.++++++.|+++|.++++|+++....... +...|......+...+|...+...+.+.+.+++..+.++|+.
T Consensus 154 ~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~~~~~---~~~~g~~~~~~~~~~~p~~~E~~~i~~~~~la~~~g~~~hi~ 230 (423)
T PRK09357 154 PVQDARLMRRALEYAKALDLLIAQHCEDPSLTEGG---VMNEGEVSARLGLPGIPAVAEEVMIARDVLLAEATGARVHIC 230 (423)
T ss_pred ccCCHHHHHHHHHHHHhcCCEEEEeCCCHHHhhcc---cccCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEE
Confidence 55688999999999999999999999876543321 222233333344456788999999999999999999999999
Q ss_pred EccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCC
Q 009410 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (535)
Q Consensus 290 H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~ 369 (535)
|++..+..+.++.+++.|+.+++++++++++++.+.+.. .+..+++.||+|...++.++++++++|+.+++||||.
T Consensus 231 H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~~~----~~~~~k~~Pplr~~~~~~~l~~~l~~G~~~~i~sDh~ 306 (423)
T PRK09357 231 HVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLT----YDPNYKVNPPLRTEEDREALIEGLKDGTIDAIATDHA 306 (423)
T ss_pred eCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHHhC----cCCceEECCCCCCHHHHHHHHHHHHcCCCeEEecCCC
Confidence 999999989999999999999999999999999987643 2467899999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcC
Q 009410 370 AFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNP 446 (535)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~ 446 (535)
|.+...+.. +|..+|. |++..++.++..++..++++++++++++|.|||+++|+++ |+|++|++|||+|+|.
T Consensus 307 p~~~~~k~~---~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~A~~~g~~~--G~i~~G~~AD~~i~d~ 381 (423)
T PRK09357 307 PHAREEKEC---EFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLEKMTINPARILGLPA--GPLAEGEPADLVIFDP 381 (423)
T ss_pred CCChHHccC---CHhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCC--CccCCCCcCCEEEEcC
Confidence 988776643 5766665 8899999988777777789999999999999999999954 9999999999999999
Q ss_pred CCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC
Q 009410 447 NSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 447 ~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~ 488 (535)
+.++.++++++.+...|+||+|..+.++|..||++|++||++
T Consensus 382 ~~~~~v~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~~ 423 (423)
T PRK09357 382 EAEWTVDGEDFASKGKNTPFIGMKLKGKVVYTIVDGKIVYQD 423 (423)
T ss_pred CCCEEEchhhcccCCCCCCCcCCEEeeEEEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999975
No 21
>PRK08417 dihydroorotase; Provisional
Probab=100.00 E-value=4.8e-50 Score=404.57 Aligned_cols=379 Identities=21% Similarity=0.318 Sum_probs=314.8
Q ss_pred EEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC-
Q 009410 73 VYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING- 151 (535)
Q Consensus 73 I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~- 151 (535)
|+|+||||++|+++. .+.++||++|++|+|||||+|+|+..+ +.. .+++.+..++++++||||++||.+..+.
T Consensus 1 i~I~dG~I~~i~~~~---~~~~viDa~g~~vlPG~ID~HvH~~~~--~~~-~e~~~t~s~aA~aGGvTtv~dmpnt~P~~ 74 (386)
T PRK08417 1 IRIKDGKITEIGSDL---KGEEILDAKGKTLLPALVDLNVSLKND--SLS-SKNLKSLENECLKGGVGSIVLYPDSTPAI 74 (386)
T ss_pred CEEECCEEEEecCCC---CCCeEEECCCCEEccCeeEEeeeeCCC--CcC-hhhHHHHHHHHHcCCcEEEEeCCCCCCCC
Confidence 689999999998764 357899999999999999999999765 433 5889999999999999999999753332
Q ss_pred ChHHHHHHHHHHhcc---cccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcC
Q 009410 152 SLTAGFEAYEKKAKN---SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLG 228 (535)
Q Consensus 152 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g 228 (535)
...+.++...+.... ..+++ .... ...+...++..+. +.|+..+|.+. ..+.+.+.++++.+++.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~i~~l~-~~Gv~~~k~~~------~~~~~~l~~~~~~a~~~g 143 (386)
T PRK08417 75 DNEIALELINSAQRELPMQIFPS---IRAL-DEDGKLSNIATLL-KKGAKALELSS------DLDANLLKVIAQYAKMLD 143 (386)
T ss_pred CCHHHHHHHHHHhhccCCcEEEE---EEEE-CCCccHHHHHHHH-HCCCEEEECCC------CCCHHHHHHHHHHHHHcC
Confidence 233444443333222 12222 2233 2334467777776 77998887631 358899999999999999
Q ss_pred CeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCC
Q 009410 229 ALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQ 308 (535)
Q Consensus 229 ~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~ 308 (535)
.++..|+++...... .+...|......+...+|..+|..++.+++++++..+.++|+.|.++.+.++.++.+++.|+
T Consensus 144 ~~V~~HaEd~~~~~~---~~~~~g~~~~~~~~~~rp~~aE~~~v~~~~~la~~~~~~lhi~hvS~~~~~~~i~~ak~~g~ 220 (386)
T PRK08417 144 VPIFCRCEDSSFDDS---GVMNDGELSFELGLPGIPSIAETKEVAKMKELAKFYKNKVLFDTLALPRSLELLDKFKSEGE 220 (386)
T ss_pred CEEEEeCCCHHHhhH---HHHhcChhhHHhCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCC
Confidence 999999998765443 23445655666667779999999999999999999999999999999999999999999999
Q ss_pred cEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcc
Q 009410 309 RVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN 388 (535)
Q Consensus 309 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~ 388 (535)
+|++++++||++++.+++.. .+..+|++||+|...+++++|+.+.+|...+++|||.|++...+.. +|+.+|.
T Consensus 221 ~vt~ev~ph~L~l~~~~~~~----~~~~~k~~PPlR~~~d~~~L~~~l~~g~Id~i~SDHaP~~~~~K~~---~~~~a~~ 293 (386)
T PRK08417 221 KLLKEVSIHHLILDDSACEN----FNTAAKLNPPLRSKEDRLALLEALKEGKIDFLTSLHSAKSNSKKDL---AFDEAAF 293 (386)
T ss_pred CEEEEechHHHeeCHHHhcC----cCcccEECCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccC---CHhHCCC
Confidence 99999999999999987742 3467899999999999999999999999999999999998777653 6777776
Q ss_pred ---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCC
Q 009410 389 ---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNV 465 (535)
Q Consensus 389 ---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p 465 (535)
|++..+++++..++..++++++++++++|.|||++||+. + |+|++|+.|||+++|.+..+.++. .|+|
T Consensus 294 G~~g~e~~~~~~~~~~v~~~~~~~~~~~~~~t~~pA~~lgl~-~-G~l~~G~~ADlvi~d~~~~~~~~~-------~~~p 364 (386)
T PRK08417 294 GIDSICEYFSLCYTYLVKEGIITWSELSRFTSYNPAQFLGLN-S-GEIEVGKEADLVLFDPNESTIIDD-------NFSL 364 (386)
T ss_pred CchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCCC-C-CccCCCCcCCEEEEcCCCCeEeCC-------CCCC
Confidence 899999999988888888999999999999999999994 4 999999999999999998888863 5899
Q ss_pred CCCeeEeeEEEEEEECCEEEEE
Q 009410 466 YEGRRVKGKVEVTIAGGRVVWE 487 (535)
Q Consensus 466 ~~~~~~~~~v~~v~~~Gr~V~~ 487 (535)
|+|..+.++|..||++|++||+
T Consensus 365 ~~g~~~~g~v~~tiv~G~~v~~ 386 (386)
T PRK08417 365 YSGDELYGKIEAVIIKGKLYLE 386 (386)
T ss_pred ccCCEEeccEEEEEECCEEEeC
Confidence 9999999999999999999974
No 22
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=100.00 E-value=3.9e-48 Score=394.70 Aligned_cols=403 Identities=28% Similarity=0.405 Sum_probs=332.4
Q ss_pred ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEecccc
Q 009410 68 QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVI 147 (535)
Q Consensus 68 ~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~ 147 (535)
+..++|+|+||||++|++.. .+.+.++||++|++|+|||||+|+|+... +....+++....+.++++||||++++..
T Consensus 3 ~~~~~v~I~~g~I~~i~~~~-~~~~~~~ida~g~~v~PG~ID~H~H~~~~--~~~~~~~~~~~~~~~~~~GvTtv~~~~~ 79 (411)
T TIGR00857 3 ETEVDILVEGGRIKKIGKLR-IPPDAEVIDAKGLLVLPGFIDLHVHLRDP--GEEYKEDIESGSKAAAHGGFTTVADMPN 79 (411)
T ss_pred eEEEEEEEECCEEEEeeccC-CCCCCeEEECCCCEEecCEEEcccCCCCC--CCccHhHHHHHHHHHHhCCeEEEEEecC
Confidence 35689999999999997522 23456899999999999999999999754 4456788888899999999999999865
Q ss_pred CCCC-ChHHHHHHHHHHhc-ccccccceeeeeecCCh-hhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHH
Q 009410 148 PING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDE-VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRC 224 (535)
Q Consensus 148 ~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a 224 (535)
..+. ...+.++...+... ...+++.++.+...... +..+++.++. ..|+.+ ++|..+ +.+..+...+.++++.+
T Consensus 80 t~p~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~-~~Gv~g-~~f~~~-~~~~~~~~~l~~~~~~a 156 (411)
T TIGR00857 80 TKPPIDTPETLEWKLQRLKKVSLVDVHLYGGVTQGNQGKELTEAYELK-EAGAVG-RMFTDD-GSEVQDILSMRRALEYA 156 (411)
T ss_pred CCCCCCcHHHHHHHHHHhccCCcccEEEEEEEecCCccccHHHHHHHH-HCCcEE-EEEEeC-CcccCCHHHHHHHHHHH
Confidence 3332 45556665555543 35677877777665432 2355666665 567777 223322 22346889999999999
Q ss_pred HhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHH
Q 009410 225 KSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKAR 304 (535)
Q Consensus 225 ~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 304 (535)
+++|+++.+|+++....... +...|...+..|...+|..+|..++.+++.+++..+.++|+.|+++.+.++.+..++
T Consensus 157 ~~~g~~v~iH~E~~~l~~~~---~~~~g~~~~~~~~~~~p~~aE~~ai~~~~~la~~~~~~~~i~Hvs~~~~l~~i~~a~ 233 (411)
T TIGR00857 157 AIAGVPIALHAEDPDLIYGG---VMHEGPSAAQLGLPARPPEAEEVAVARLLELAKHAGCPVHICHISTKESLELIVKAK 233 (411)
T ss_pred HHcCCEEEEecCCHHHHhhh---hhcCCcccHhhCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHH
Confidence 99999999999987654433 344566667778888999999999999999999999999999999999999999999
Q ss_pred HcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcc
Q 009410 305 KAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFR 384 (535)
Q Consensus 305 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~ 384 (535)
+.|+.|++++++|+++++.+.+.. .+..++++||+|...++.++++++++|...+++|||.|+....+.. +|.
T Consensus 234 ~~g~~v~~ev~ph~L~~~~~~~~~----~~~~~k~~Pplr~~~~~~~L~~~l~~g~i~~i~sDh~p~~~~~k~~---~~~ 306 (411)
T TIGR00857 234 SQGIKITAEVTPHHLLLSEEDVAR----LDGNGKVNPPLREKEDRLALIEGLKDGIIDIIATDHAPHTLEEKTK---EFA 306 (411)
T ss_pred HcCCcEEEeechhhheecHHHHhC----CCccEEEcCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCChHHccC---CHh
Confidence 999999999999999999987753 3478999999999999999999999999999999999988766543 576
Q ss_pred cCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccC
Q 009410 385 KIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRL 461 (535)
Q Consensus 385 ~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~ 461 (535)
.+|. |++..++.++. .+..++++++++++++|.|||+++|+++ .|+|++|+.|||+++|.+..+.++.+++.+..
T Consensus 307 ~~~~G~~g~e~~~~~~~~-~~~~~~~~~~~~~~~~t~~pa~~~g~~~-~G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~ 384 (411)
T TIGR00857 307 AAPPGIPGLETALPLLLQ-LLVKGLISLKDLIRMLSINPARIFGLPD-KGTLEEGNPADITVFDLKKEWTINAETFYSKA 384 (411)
T ss_pred hCCCCceeHHHHHHHHHH-HHHhCCCCHHHHHHHHhHHHHHHhCCCC-CCccCCCCcCCEEEEcCCCCEEEchHHCccCC
Confidence 6766 88888888884 4445579999999999999999999954 49999999999999999999999999999999
Q ss_pred CCCCCCCeeEeeEEEEEEECCEEEEEC
Q 009410 462 DTNVYEGRRVKGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 462 ~~~p~~~~~~~~~v~~v~~~Gr~V~~~ 488 (535)
.|+||+|..+.++|.+|+++|++||+|
T Consensus 385 ~~sp~~g~~~~g~v~~tiv~G~~v~~~ 411 (411)
T TIGR00857 385 KNTPFEGMSLKGKPIATILRGKVVYED 411 (411)
T ss_pred CCCCcCCCEEEeEEEEEEECCEEEecC
Confidence 999999999999999999999999975
No 23
>PRK01211 dihydroorotase; Provisional
Probab=100.00 E-value=2.3e-48 Score=391.12 Aligned_cols=398 Identities=21% Similarity=0.300 Sum_probs=319.2
Q ss_pred EEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHHHHh
Q 009410 57 IKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALA 136 (535)
Q Consensus 57 i~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~ 136 (535)
|.| +++..+....++|+|+||+|++|+++.. +.++||++| +|+|||||+|+|+..+ |....+++.+..+++++
T Consensus 3 ~~~-~~~~~~~~~~~di~I~dGkI~~i~~~~~---~~~~ida~g-~vlPG~ID~HvH~r~p--g~~~ked~~s~s~AAaa 75 (409)
T PRK01211 3 ICG-NFYYKGKFDYLEIEVEDGKIKSIKKDAG---NIGKKELKG-AILPAATDIHVHFRTP--GETEKEDFSTGTLSAIF 75 (409)
T ss_pred eec-eeEEcCcEEEEEEEEECCEEEEecCCCC---CceEEEecc-EEcCCeEEeeeccCCC--CCcccCcHHHHHHHHHc
Confidence 455 4444445667899999999999987542 468999999 9999999999999988 78889999999999999
Q ss_pred CCcEEEeccccCCCC-ChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCH
Q 009410 137 GGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMIND 214 (535)
Q Consensus 137 ~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~ 214 (535)
+||||++||....+. ...+.++...+... ...++++++......+. + +. +.|+.++|+|+.+... ....
T Consensus 76 GGvTtv~dmPnt~P~~~~~e~~~~~~~~a~~~s~vd~~~~~~~~~~~~----~---~~-~~g~~~~k~f~~~~~~-~~~~ 146 (409)
T PRK01211 76 GGTTFIMDMPNNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSMETGNNA----L---IL-DERSIGLKVYMGGTTN-TNGT 146 (409)
T ss_pred CCcEEEEECCCCCCCCChHHHHHHHHHHhccCceeeEEEEeccCCchh----h---HH-hccCcEEEEEcCCCcC-CCcc
Confidence 999999999754322 45566665555553 45788888776532221 1 22 4588899998653210 0000
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCH
Q 009410 215 ELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM 294 (535)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 294 (535)
......++.+.+.|.++.+|+++......... ..+ ....|...+|..+|..++.+++.++.. ++|+.|.++.
T Consensus 147 ~~~~~~l~~~~~~g~~v~~H~E~~~l~~~~~~---~~~--~~~~~~~~rP~~aE~~ai~~~~~la~~---~~hi~HvSt~ 218 (409)
T PRK01211 147 DIEGGEIKKINEANIPVFFHAELSECLRKHQF---ESK--NLRDHDLARPIECEIKAVKYVKNLDLK---TKIIAHVSSI 218 (409)
T ss_pred ccCHHHHHHHHccCCEEEEeccChHHhhhhhh---Ccc--hHhhCCCCCCHHHHHHHHHHHHHHhCC---CcEEEEecCh
Confidence 11223446666889999999998765443211 111 223455668999999999999999876 5899999998
Q ss_pred HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChh
Q 009410 295 DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNST 374 (535)
Q Consensus 295 ~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~ 374 (535)
+.. .+|++++++||++++.+.. .+..++++||+|...+++++|+.+.+|...+++|||+|+...
T Consensus 219 ~~~----------~~vt~Ev~phhL~l~~~~~------~~~~~kvnPPLRs~~d~~aL~~~l~dG~ID~i~SDHaP~~~~ 282 (409)
T PRK01211 219 DVI----------GRFLREVTPHHLLLNDDMP------LGSYGKVNPPLRDRWTQERLLEEYISGRFDILSSDHAPHTEE 282 (409)
T ss_pred hhc----------CceEEEecHHHHccccccc------cCCceeEcCCCCCHHHHHHHHHHHhCCCCCEEeCCCCCCChh
Confidence 753 2799999999999998751 347899999999999999999999999999999999999877
Q ss_pred hhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCcee
Q 009410 375 QKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFE 451 (535)
Q Consensus 375 ~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~ 451 (535)
++ .+|+.+|+ |+++.+++++ .++.++++|++++++..|.|||++||+ + .|+|++|++|||||+|.+..|.
T Consensus 283 eK----~~~~~a~~G~~gle~~lpl~~-~~v~~~~isl~~~v~~~s~nPAki~gl-~-kG~l~~G~~ADlvi~D~~~~~~ 355 (409)
T PRK01211 283 DK----QEFEYAKSGIIGVETRVPLFL-ALVKKKILPLDVLYKTAIERPASLFGI-K-KGKIEEGYDADFMAFDFTNIKK 355 (409)
T ss_pred Hh----CCHhhCCCCCCcHHHHHHHHH-HHHHcCCCCHHHHHHHHHHHHHHHhCC-C-CCcccCCCcCCEEEEcCCCeEE
Confidence 65 26777776 9999999998 578888899999999999999999999 3 6999999999999999999999
Q ss_pred eecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeec
Q 009410 452 ITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM 503 (535)
Q Consensus 452 i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~ 503 (535)
++.+.+.+...|+||+|..+. +|..||++|++||++|+++..+ .|+++++
T Consensus 356 v~~~~~~s~~~~spf~G~~~~-~v~~tiv~G~~v~~~~~~~~~~-~G~~~~~ 405 (409)
T PRK01211 356 INDKRLHSKCPVSPFNGFDAI-FPSHVIMRGEVVIDNYELISER-TGKFVPK 405 (409)
T ss_pred EChHHhhccCCCCCCCCCEec-cEEEEEECCEEEEECCEEcccc-CceEecc
Confidence 999999999999999999987 9999999999999999998766 8999986
No 24
>PRK04250 dihydroorotase; Provisional
Probab=100.00 E-value=3.2e-46 Score=376.21 Aligned_cols=390 Identities=25% Similarity=0.344 Sum_probs=307.3
Q ss_pred ccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHHHHhCC
Q 009410 59 GGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGG 138 (535)
Q Consensus 59 n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~G 138 (535)
+++|++.....+++|+|+||+|++|++. . ..+.++||++|++|+|||||+|+|+... +....+++.+..++++++|
T Consensus 3 ~~~v~~~~~~~~~~i~i~~G~I~~i~~~-~-~~~~~~iD~~g~~v~PG~ID~HvH~~~~--~~~~~e~~~~~~~aa~~gG 78 (398)
T PRK04250 3 EGKFLLKGRIVEGGIGIENGRISKISLR-D-LKGKEVIKVKGGIILPGLIDVHVHLRDF--EESYKETIESGTKAALHGG 78 (398)
T ss_pred eEEEEECCcEEEEEEEEECCEEEEeeCC-C-CCCCeEEECCCCEEccCEEeccccccCC--CCCcHHHHHHHHHHHHhCC
Confidence 5678877766789999999999999741 1 1356899999999999999999999654 4567788899999999999
Q ss_pred cEEEeccccCCCC-ChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHH
Q 009410 139 TTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDEL 216 (535)
Q Consensus 139 vTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~ 216 (535)
|||++||.+..+. ...+.++...+... ...++++++. ....+ ..++..+. . ..+|.|+.+... ....+.
T Consensus 79 vTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~---~~~l~~l~-~---~~~k~f~~~~~~-~~~~~~ 149 (398)
T PRK04250 79 ITLVFDMPNTKPPIMDEKTYEKRMRIAEKKSYADYALNF-LIAGN---CEKAEEIK-A---DFYKIFMGASTG-GIFSEN 149 (398)
T ss_pred eEEEEECCCCCCCCCcHHHHHHHHHHhCcCceeeEEEEE-ecCCC---HHHHHHHH-h---hheEEEEecCCC-chhHHH
Confidence 9999999654332 45555655555543 4678888776 43322 23344432 1 246777654221 112222
Q ss_pred HHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHH
Q 009410 217 LIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDA 296 (535)
Q Consensus 217 l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 296 (535)
+... .+ +.+..+.+|+++..... + ...+|..+|..++.+++.+++..+.++|+.|.++.+.
T Consensus 150 ~~~~--~~-~~~~~v~~H~E~~~~~~---------~-------~~~~p~~aE~~av~r~~~la~~~~~~lhi~HvSt~~~ 210 (398)
T PRK04250 150 FEVD--YA-CAPGIVSVHAEDPELIR---------E-------FPERPPEAEVVAIERALEAGKKLKKPLHICHISTKDG 210 (398)
T ss_pred HHHH--HH-hcCCeEEEEecChhhhh---------c-------ccCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHH
Confidence 3222 22 23557999999876432 1 1247999999999999999999999999999999877
Q ss_pred HHHHHHHHHcCCc-EEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhh
Q 009410 297 MEEIAKARKAGQR-VIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQ 375 (535)
Q Consensus 297 ~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~ 375 (535)
.+.+ ++.|+. |++++++||++++.+.+ . .+..++++||+|...+++++|+.+.. ..+++|||.|++...
T Consensus 211 ~~~i---~~~g~~~vt~Ev~ph~L~l~~~~~-~----~~~~~k~~PPLR~~~d~~aL~~~l~~--Id~i~sDHaP~~~~~ 280 (398)
T PRK04250 211 LKLI---LKSNLPWVSFEVTPHHLFLTRKDY-E----RNPLLKVYPPLRSEEDRKALWENFSK--IPIIASDHAPHTLED 280 (398)
T ss_pred HHHH---HHcCCCcEEEEeCHHHhccCHHHH-C----CCCceEEcCCCCCHHHHHHHHHhhcc--CCEEEcCCcccCHHH
Confidence 6655 446887 99999999999999877 2 35789999999999999999999964 799999999998777
Q ss_pred hhcCCCCcccCcc--hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeee
Q 009410 376 KAFGIDDFRKIPN--GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEIT 453 (535)
Q Consensus 376 ~~~~~~~~~~~~~--g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~ 453 (535)
+... .++ |++..+++++ .++.++++|++++++++|.|||++||+ ++.| |++|++|||+|+|.+..+.++
T Consensus 281 k~~~------~~G~~g~e~~lpl~~-~~v~~~~lsl~~~v~~~t~npAk~lgl-~~~G-L~~G~~ADlvi~D~~~~~~v~ 351 (398)
T PRK04250 281 KEAG------AAGIPGLETEVPLLL-DAANKGMISLFDIVEKMHDNPARIFGI-KNYG-IEEGNYANFAVFDMKKEWTIK 351 (398)
T ss_pred hhcC------CCCcchHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHhCC-CCcC-ccCCCcCCEEEEcCCCcEEEC
Confidence 6421 123 8999999998 467788899999999999999999999 4579 999999999999999999999
Q ss_pred cCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceE
Q 009410 454 ARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKY 500 (535)
Q Consensus 454 ~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~ 500 (535)
.+++.+...|+||+|..+.++|.+||++|++||++|+++..+ .|++
T Consensus 352 ~~~~~s~~~~sp~~g~~l~g~v~~tiv~G~~v~~~g~~~~~~-~G~~ 397 (398)
T PRK04250 352 AEELYTKAGWTPYEGFKLKGKVIMTILRGEVVMEDDEIIGKP-RGVR 397 (398)
T ss_pred hhhccccCCCCCCCCCEEeeEEEEEEECCEEEEECCEEcCCC-CCeE
Confidence 999999999999999999999999999999999999998754 6765
No 25
>PRK00369 pyrC dihydroorotase; Provisional
Probab=100.00 E-value=1e-43 Score=355.61 Aligned_cols=372 Identities=21% Similarity=0.242 Sum_probs=294.6
Q ss_pred eeeEEEeCCEEEEeeCCCCCCCCceEEec-CCCEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccC
Q 009410 70 IADVYVEDGIVVAVQPNINVGDDVKVLDA-TGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIP 148 (535)
Q Consensus 70 ~~~I~I~~G~I~~Vg~~~~~~~~~~vID~-~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~ 148 (535)
+..|.|++|+|..|++.. +.++++||+ +|++|+|||||+|+|+..+ |....+++.++.++++++||||++||...
T Consensus 13 ~~~~~~~~~~~~~i~~~~--~~~~~~id~~~G~~vlPG~ID~HvH~r~p--g~~~~ed~~sgs~AAa~GGvTtv~~mPnt 88 (392)
T PRK00369 13 KEIKEICINFDRRIKEIK--SRCKPDLDLPQGTLILPGAIDLHVHLRGL--KLSYKEDVASGTSEAAYGGVTLVADMPNT 88 (392)
T ss_pred CceEEEeeeeeeeEeecc--CCCCceeecCCCCEEeCCEEEcccccCCC--CCcccccHHHHHHHHHhCCcEEEEECCCC
Confidence 578889999999998763 447889999 6999999999999999987 78889999999999999999999999754
Q ss_pred CCC-ChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh
Q 009410 149 ING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS 226 (535)
Q Consensus 149 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~ 226 (535)
.+. ...+.++...+... ...++++++.+.... .+++ . ..|..++|.|.+. ....+ +++.+.+
T Consensus 89 ~P~~~~~~~l~~~~~~a~~~~~vd~~~~~~~~~~----~~el---~-~~~~~g~k~f~~~----~~~~~----~~~~~~~ 152 (392)
T PRK00369 89 IPPLNTPEAITEKLAELEYYSRVDYFVYSGVTKD----PEKV---D-KLPIAGYKIFPED----LEREE----TFRVLLK 152 (392)
T ss_pred CCCCChHHHHHHHHHHhCcCCeEEEEEEeeccCC----HHHH---H-HhhCceEEEECCC----CchHH----HHHHHHH
Confidence 332 45566666555553 467888887755321 1222 2 4477788887421 12233 3344445
Q ss_pred cCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHc
Q 009410 227 LGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKA 306 (535)
Q Consensus 227 ~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 306 (535)
++.++.+|+++....... +...+|..+|..++.++..+ .++|+.|.++.+. ++.+++.
T Consensus 153 ~~~~v~~HaE~~~l~~~~--------------~~~~rp~~aE~~ai~~~~~~-----~~lhi~HvSt~~~---v~~ak~~ 210 (392)
T PRK00369 153 SRKLKILHPEVPLALKSN--------------RKLRRNCWYEIAALYYVKDY-----QNVHITHASNPRT---VRLAKEL 210 (392)
T ss_pred hCCEEEEeCCCHHHhhcc--------------hhcccCHHHHHHHHHHHHHh-----CCEEEEECCCHHH---HHHHHHC
Confidence 558999999987653311 11236666777766666655 7899999999875 4556667
Q ss_pred CCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccC
Q 009410 307 GQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKI 386 (535)
Q Consensus 307 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~ 386 (535)
| ++++++|||++++.+. +..++++||+|...+++++|+.+++ ..+++|||+|+....+.. +|..+
T Consensus 211 g--vt~Ev~pHhL~l~~~~--------~~~~k~~PPLR~~~dr~aL~~~l~~--id~i~SDHaP~~~~~K~~---~f~~~ 275 (392)
T PRK00369 211 G--FTVDITPHHLLVNGEK--------DCLTKVNPPIRDINERLWLLQALSE--VDAIASDHAPHSSFEKLQ---PYEVC 275 (392)
T ss_pred C--CeEEechhHheeccCC--------CCceEEeCCCCCHHHHHHHHHHHHh--CCEEEeCCCCCCHHHccC---CHhhC
Confidence 6 7789999999998751 3568999999999999999999998 789999999998877643 68888
Q ss_pred cc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCC
Q 009410 387 PN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDT 463 (535)
Q Consensus 387 ~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~ 463 (535)
|+ |++..+++++. ++..++++++++++++|.|||++||+. .|.|++|+.|||+++|.+ .|.+ +...++..|
T Consensus 276 ~~Gi~GlE~~lpll~~-~v~~~~lsl~~~v~~~s~nPA~ilgl~--~g~i~~G~~ADlvi~d~~-~~~~--~~~~sk~~~ 349 (392)
T PRK00369 276 PPGIAALSFTPPFIYT-LVSKGILSIDRAVELISTNPARILGIP--YGEIKEGYRANFTVIQFE-DWRY--STKYSKVIE 349 (392)
T ss_pred CCCCeeHHHHHHHHHH-HHHcCCCCHHHHHHHHHHHHHHHhCCC--CCccCCCCccCEEEEeCC-ceeE--ccccccCCC
Confidence 77 89999999885 667788999999999999999999994 388999999999999987 5665 567889999
Q ss_pred CCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecC
Q 009410 464 NVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 504 (535)
Q Consensus 464 ~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~ 504 (535)
+||+|..+.++|.+||++|++||++++++...+.|++=+++
T Consensus 350 sp~~G~~l~G~v~~ti~~G~~v~~~~~~~~~~g~G~~~~~~ 390 (392)
T PRK00369 350 TPLDGFELKASVYATIVQGKLAYLEGEVFPVKGINPFGERK 390 (392)
T ss_pred CCCCCCEeeeEEEEEEECCEEEEECCeEecCCCCCCCCccc
Confidence 99999999999999999999999999999888888775554
No 26
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=100.00 E-value=7.3e-43 Score=348.08 Aligned_cols=355 Identities=30% Similarity=0.407 Sum_probs=292.5
Q ss_pred CCEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHh-cccccccceeeee
Q 009410 100 GKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAI 177 (535)
Q Consensus 100 G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (535)
|++|+||+||+|+|+..+ |....+++.+..++++++||||++||....+. ...+.++...... ....++++++...
T Consensus 1 G~~vlPG~iD~HvH~r~p--g~~~~ed~~s~t~aA~~GGvTtv~~mPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~~ 78 (361)
T cd01318 1 GLLILPGVIDIHVHFREP--GLTYKEDFVSGSRAAAAGGVTTVMDMPNTKPPTTTAEALYEKLRLAAAKSVVDYGLYFGV 78 (361)
T ss_pred CCEEecCeeEeeecCCCC--CCCccCcHHHHHHHHHcCCCEEEEECCCCCCCCCcHHHHHHHHHHhccCceeEEEEEEee
Confidence 789999999999999887 77789999999999999999999999754332 4555665555554 3457888887765
Q ss_pred ecCChhhHHHHHHHHHHcCCCEEEEEeecCC-CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009410 178 TKWDEVVSDEMEVMVKEKGINSFKFFMAYKG-SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP 256 (535)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~-~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (535)
... +++.++. +.|..++|.|..+.. ....+...+.++++.+. .++.+|+++..............+
T Consensus 79 ~~~-----~~l~~~~-~~~~~g~k~f~~~~~~~~~~~~~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~---- 145 (361)
T cd01318 79 TGS-----EDLEELD-KAPPAGYKIFMGDSTGDLLDDEETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGES---- 145 (361)
T ss_pred cCh-----hhHHHHH-HhhCcEEEEEEecCCCCcCCCHHHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhcc----
Confidence 432 3444544 557888998875422 22357888888888774 789999999876554444333222
Q ss_pred ccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccce
Q 009410 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336 (535)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (535)
.|...+|..+|..++.+.+.+++..+.++|+.|.++.+.++.+..++ .+|++++++++++++.+.+.. .+..
T Consensus 146 -~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~Hvs~~~~~~~i~~~k---~~vt~ev~ph~L~l~~~~~~~----~~~~ 217 (361)
T cd01318 146 -AHPRIRDAEAAAVATARALKLARRHGARLHICHVSTPEELKLIKKAK---PGVTVEVTPHHLFLDVEDYDR----LGTL 217 (361)
T ss_pred -CCCCcCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHhC---CCeEEEeCHHHhhcCHHHHhc----CCCe
Confidence 55667899999999999999999999999999999998766666554 689999999999999887752 3468
Q ss_pred eEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHH
Q 009410 337 YVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYV 413 (535)
Q Consensus 337 ~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal 413 (535)
++++||+|...+++++++++++|.+.+++|||.|.....+.. +|+.+|. |++..++.++ .++..+++++++++
T Consensus 218 ~k~~PPlr~~~d~~aL~~~l~~G~id~i~SDh~P~~~~~k~~---~~~~a~~G~~g~e~~l~~~~-~~v~~~~l~l~~a~ 293 (361)
T cd01318 218 GKVNPPLRSREDRKALLQALADGRIDVIASDHAPHTLEEKRK---GYPAAPSGIPGVETALPLML-TLVNKGILSLSRVV 293 (361)
T ss_pred EEEeCCCCCHHHHHHHHHHHhCCCCCEEeeCCCCCCHHHccC---ChhhCCCCCccHHHHHHHHH-HHHHcCCCCHHHHH
Confidence 999999999999999999999999999999999998776643 5777776 7788777777 46677789999999
Q ss_pred HHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECC
Q 009410 414 RLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGG 482 (535)
Q Consensus 414 ~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~G 482 (535)
+++|.|||+++|+. ++|+|++|+.|||+|+|.+..|.++.+++.+...|+||+|+.+.++|.+||++|
T Consensus 294 ~~~t~nPA~~lgl~-~~G~i~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~tp~~G~~l~G~v~~t~~~G 361 (361)
T cd01318 294 RLTSHNPARIFGIK-NKGRIAEGYDADLTVVDLKEERTIRAEEFHSKAGWTPFEGFEVTGFPVMTIVRG 361 (361)
T ss_pred HHHhHHHHHHhCCC-CCCccCCCCcCCEEEEeCCCCEEECHHHccccCCCCCCCCCEEeeEEEEEEeCc
Confidence 99999999999994 479999999999999999999999999999999999999999999999999998
No 27
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=100.00 E-value=3.4e-42 Score=347.25 Aligned_cols=367 Identities=27% Similarity=0.384 Sum_probs=302.6
Q ss_pred ceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcc-cccc
Q 009410 93 VKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMD 170 (535)
Q Consensus 93 ~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~ 170 (535)
.++||++|++|+||+||+|+|+... +....+++.+..++++.+||||++||....+. .....++........ ...+
T Consensus 2 ~~~iD~~g~~vlPG~iD~HvH~~~~--~~~~~e~~~s~s~aA~~GGvTtii~~p~~~p~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
T cd01317 2 AEVIDAEGKILAPGLVDLHVHLREP--GFEYKETLESGAKAAAAGGFTTVVCMPNTNPVIDNPAVVELLKNRAKDVGIVR 79 (374)
T ss_pred CeEEECCCCEEecCEEeeccccCCC--CccccchHHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHHHHhccCCcee
Confidence 5789999999999999999999877 55567889999999999999999999754332 455556655555433 4556
Q ss_pred cceeeeeecCCh-hhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHH
Q 009410 171 YGFHMAITKWDE-VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMI 249 (535)
Q Consensus 171 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~ 249 (535)
+.++.+...... +..+++..+. ..|+..+|.+ +....+...+.++++.+++.|.++.+|+++...... .+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~i~~l~-~~G~~~~k~~----~~~~~~~~~l~~~~~~~~~~g~~v~~H~E~~~~~~~---~~~ 151 (374)
T cd01317 80 VLPIGALTKGLKGEELTEIGELL-EAGAVGFSDD----GKPIQDAELLRRALEYAAMLDLPIIVHPEDPSLAGG---GVM 151 (374)
T ss_pred EEEEEEEeeCCCcccHHHHHHHH-HCCcEEEEcC----CcCCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhc---cCc
Confidence 666666554332 2366777766 6788888843 223467889999999999999999999987765432 122
Q ss_pred HcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCc
Q 009410 250 ELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHS 329 (535)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~ 329 (535)
..|......+...+|..++...+.+++++++..+.++++.|+++.+.++.+..+++.|+.+++++++|+++++++.+..
T Consensus 152 ~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~i~i~h~ss~~~l~~i~~~~~~G~~~~~e~~~h~L~ld~~~~~~- 230 (374)
T cd01317 152 NEGKVASRLGLPGIPPEAETIMVARDLELAEATGARVHFQHLSTARSLELIRKAKAKGLPVTAEVTPHHLLLDDEALES- 230 (374)
T ss_pred cCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCCEEEEecHHHHhcCHHHHhc-
Confidence 3344444455566888888889999999999999999999999998888999899999999999999999999988743
Q ss_pred CccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCC
Q 009410 330 DFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQ 406 (535)
Q Consensus 330 ~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ 406 (535)
.+..+++.||+|...++.++++++++|+.+++||||.|.+...++. +|+.++. |+++.+..+++.+++.+.
T Consensus 231 ---~~~~~k~~Pplr~~~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~---~~~~~~~Gi~g~e~~l~~~~~~~~~~~~ 304 (374)
T cd01317 231 ---YDTNAKVNPPLRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDL---PFAEAPPGIIGLETALPLLWTLLVKGGL 304 (374)
T ss_pred ---cCCceEEcCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccC---CHhhCCCcHhHHHHHHHHHHHHHHHcCC
Confidence 3567899999999999999999999999999999999988776643 5766665 889999999988888888
Q ss_pred CCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEE
Q 009410 407 ISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVT 478 (535)
Q Consensus 407 ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v 478 (535)
++++++++++|.|||+++|+. .|+|++|++|||+++|.+.++.++.+++.+...|+||+|+.+.++|.+|
T Consensus 305 ~~~~~~~~~~t~npA~~lgl~--~G~l~~G~~ADlvi~d~~~~~~~~~~~~~s~~~~sp~~G~~l~g~~~~t 374 (374)
T cd01317 305 LTLPDLIRALSTNPAKILGLP--PGRLEVGAPADLVLFDPDAEWIVDEETFRSKSKNTPFDGQKLKGRVLAT 374 (374)
T ss_pred CCHHHHHHHHHHHHHHHhCCC--CCcccCCCcCCEEEECCCCCEEEChhhccccCCCCCCCCCEEeEEEEEC
Confidence 999999999999999999994 3999999999999999999999999999999999999999999998764
No 28
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=100.00 E-value=3e-41 Score=334.64 Aligned_cols=329 Identities=35% Similarity=0.482 Sum_probs=276.3
Q ss_pred CEEeecccccccccccccCCCC-chhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHh-cccccccceeeee
Q 009410 101 KFVMPGGIDPHTHLAMEFMGSE-TIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAI 177 (535)
Q Consensus 101 ~~vlPGlID~H~H~~~~~~g~~-~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (535)
++|+||+||+|+|+..+ +.. ..+++.++.++++++||||++||....+. ...+.++...+.. ....++++++...
T Consensus 1 ~~vlPG~iD~HvH~r~p--g~~~~~e~~~t~t~aA~~GG~Ttv~~mpn~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~ 78 (337)
T cd01302 1 LLVLPGFIDIHVHLRDP--GGTTYKEDFESGSRAAAAGGVTTVIDMPNTGPPPIDLPAIELKIKLAEESSYVDFSFHAGI 78 (337)
T ss_pred CEecCCeeEeeeccCCC--CCCCchhHHHHHHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHhCcCcEeeEEEEEec
Confidence 57999999999999887 555 78999999999999999999999754332 3445555544444 3467888887766
Q ss_pred ecCChhhHHHHHHHHHHcCCCEEEEEeecCCCC--cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009410 178 TKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF--MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (535)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (535)
... +...++.++. +.|+.++|+|+.+.... ..+.+.+.++++.+.+.|.++.+|++
T Consensus 79 ~~~--~~~~el~~l~-~~Gv~g~K~f~~~~~~~~~~~~~~~l~~~~~~~~~~g~~v~~H~E------------------- 136 (337)
T cd01302 79 GPG--DVTDELKKLF-DAGINSLKVFMNYYFGELFDVDDGTLMRTFLEIASRGGPVMVHAE------------------- 136 (337)
T ss_pred cCc--cCHHHHHHHH-HcCCcEEEEEEeccCCCccccCHHHHHHHHHHHHhcCCeEEEeHH-------------------
Confidence 543 2456677766 68999999998654322 56889999999999999999999997
Q ss_pred cccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccc
Q 009410 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA 335 (535)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (535)
+.+.+++..+.++|+.|.++.+.++.++.+++.|++|+++++||+++++++.+.. .+.
T Consensus 137 ------------------r~~~la~~~g~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~----~~~ 194 (337)
T cd01302 137 ------------------RAAQLAEEAGANVHIAHVSSGEALELIKFAKNKGVKVTCEVCPHHLFLDESMLRL----NGA 194 (337)
T ss_pred ------------------HHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcChhhheeCHHHhhC----CCc
Confidence 2345566778999999999999999999999999999999999999999887742 347
Q ss_pred eeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHH
Q 009410 336 KYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDY 412 (535)
Q Consensus 336 ~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~ea 412 (535)
.++++||+|...+++++++++++|...+++|||.|+....+..+ .+|+.+|+ |++..++.++..+++ .+++++++
T Consensus 195 ~~k~~Pplr~~~~~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~-~~~~~a~~G~~g~e~~l~~~~~~~~~-~~i~~~~~ 272 (337)
T cd01302 195 WGKVNPPLRSKEDREALWEGVKNGKIDTIASDHAPHSKEEKESG-KDIWKAPPGFPGLETRLPILLTEGVK-RGLSLETL 272 (337)
T ss_pred eEEEeCCCCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHhccC-CCcccCCCCcccHHHHHHHHHHHHHh-cCCCHHHH
Confidence 88999999999999999999999999999999999987766432 35777776 889999988877665 46999999
Q ss_pred HHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEE
Q 009410 413 VRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVT 478 (535)
Q Consensus 413 l~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v 478 (535)
++++|.|||+++|+. +.|+|++|+.|||+|+|.+..|.++++++.++..|+||+|+.+.++|.+|
T Consensus 273 ~~~~s~~pA~~~gl~-~~g~i~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~t 337 (337)
T cd01302 273 VEILSENPARIFGLY-PKGTIAVGYDADLVIVDPKKEWKVTAEEIESKADWTPFEGMEVTGKPVST 337 (337)
T ss_pred HHHHHHHHHHHcCCC-CCCccccCCcCCEEEEeCCCcEEEcHHHhcccCCCCCcCCcEEEEEEEEC
Confidence 999999999999995 46999999999999999999999999999999999999999999998765
No 29
>PRK09061 D-glutamate deacylase; Validated
Probab=100.00 E-value=1.1e-40 Score=346.12 Aligned_cols=395 Identities=19% Similarity=0.215 Sum_probs=288.2
Q ss_pred cccEEEEccEEEcCCCc--eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHH
Q 009410 52 SSKILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~--~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~ 129 (535)
.++++|+|++|+|+++. ..++|+|+||+|++|++.. +.+.++||++|++|+|||||+|+|.... +
T Consensus 18 ~~~~li~~~~vid~~~~~~~~~~v~I~~G~I~~ig~~~--~~~~~viD~~g~~v~PG~ID~H~H~~~~--~--------- 84 (509)
T PRK09061 18 PYDLVIRNGRVVDPETGLDAVRDVGIKGGKIAAVGTAA--IEGDRTIDATGLVVAPGFIDLHAHGQSV--A--------- 84 (509)
T ss_pred cCCEEEECcEEEeCCCCeeccceEEEECCEEEEecCCC--CCCCeEEeCCCCEEecCeEeeeeCCCCC--c---------
Confidence 46799999999997764 4579999999999999753 2357899999999999999999997643 2
Q ss_pred HHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeee-------------------------------
Q 009410 130 GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT------------------------------- 178 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 178 (535)
....++..||||++++.. ........++...+.+ ..++++++.+..
T Consensus 85 ~~~~~~~~GvTtvv~~~~-~~~p~~~~~~~~~~~~--~~vn~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (509)
T PRK09061 85 AYRMQAFDGVTTALELEA-GVLPVARWYAEQAGEG--RPLNYGASVGWTPARIAVLTGPQAEGTIADFGKALGDPRWQER 161 (509)
T ss_pred cchhhccCCceeEEeecc-CCCCHHHHHHHHHhcC--CcceeehhcCcHHHHHHHhCCcccccccccccccccccccccC
Confidence 145668899999999831 1122333333332222 123443333221
Q ss_pred cCChhhHHHHHHHHH---HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009410 179 KWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (535)
Q Consensus 179 ~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (535)
..+.+...++..+.+ +.|+.+++.+..|. +..+.+.+.++++.|+++|.++..|+++....
T Consensus 162 ~~t~~el~~m~~ll~~al~~Ga~gis~~~~y~--p~~~~~eL~~l~~~A~~~g~~v~~H~e~~~~~-------------- 225 (509)
T PRK09061 162 AATPAELAEILELLEQGLDEGALGIGIGAGYA--PGTGHKEYLELARLAARAGVPTYTHVRYLSNV-------------- 225 (509)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEecCCccC--CCCCHHHHHHHHHHHHHcCCEEEEEecCcccC--------------
Confidence 011344555666553 57999998755443 34589999999999999999999999765321
Q ss_pred cccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccC------HHHHHHHHHHHHcCCcEEeccccce--------Eee
Q 009410 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------MDAMEEIAKARKAGQRVIGEPVVSG--------LVL 321 (535)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~------~~~~~~~~~~~~~g~~v~~~~~~~~--------~~~ 321 (535)
....+...+.+++++++..+.++++.|++. ...++.++.+++.|+.|+++.+||+ +.+
T Consensus 226 --------~~~~e~~av~~~i~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~Ar~~Gi~Vt~e~~P~~~~~t~~~~~~l 297 (509)
T PRK09061 226 --------DPRSSVDAYQELIAAAAETGAHMHICHVNSTSLRDIDRCLALVEKAQAQGLDVTTEAYPYGAGSTVVGAAFF 297 (509)
T ss_pred --------CchhHHHHHHHHHHHHHHhCCCEEEEeeccCCcccHHHHHHHHHHHHHcCCcEEEEecCcchhhhhhccccc
Confidence 012345678999999999999999999998 7777889999999999999999999 666
Q ss_pred CcccccCcCcccccee---EE---cCCCCC-------------------------cccHHHHHHHHhcCCeEEEeCCCCC
Q 009410 322 DDSWLWHSDFVTAAKY---VM---SPPIRA-------------------------SGHNKALQAALATGILQLVGTDHCA 370 (535)
Q Consensus 322 ~~~~~~~~~~~~~~~~---~~---~p~~r~-------------------------~~~~~~~~~~l~~Gv~~~lgtD~~~ 370 (535)
++++....+ ..+ ++ .||+|. ..+.+.++..++.+.. +++||+.|
T Consensus 298 ~~~~~~~~~----~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~p~~-~i~sD~~p 372 (509)
T PRK09061 298 DPGWLERMG----LGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSVLFPGA-AIASDAMP 372 (509)
T ss_pred CHHHHHHhC----CCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHhCCCCc-eEecCCcc
Confidence 554443211 222 44 677766 4457788999998876 99999988
Q ss_pred CChhhhhcCCCCcccCcc---hHH------HHHHHHHHHHHhc-CCCCHHHHHHHHhHHHHHHcC-----CCCCCccccC
Q 009410 371 FNSTQKAFGIDDFRKIPN---GIE------ERMHLVWDTMVES-GQISVTDYVRLTSTECARIFN-----VYPRKGAILV 435 (535)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~---g~~------~~l~~~~~~~~~~-~~ls~~eal~~~T~~~A~~lg-----l~~~~GsI~~ 435 (535)
+....+. ..|.+.|. +.+ ..++..++.+++. ..+|++++++++|.+||++|| ++ +.|+|++
T Consensus 373 ~~~~~~~---~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~v~~~~~isl~~ai~~~T~~pA~~lg~~~~~l~-~~G~i~~ 448 (509)
T PRK09061 373 WTWSDGT---VYEGDAWPLPEDAVSHPRSAGTFARFLREYVRERKALSLLEAIRKCTLMPAQILEDSVPAMR-RKGRLQA 448 (509)
T ss_pred ccccccc---cccccccccccCCCCCchhhcchHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhcccccccc-CCEeeCC
Confidence 7766543 25555554 334 4566777666665 359999999999999999999 74 4799999
Q ss_pred CCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCC
Q 009410 436 GSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRP 505 (535)
Q Consensus 436 Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~ 505 (535)
|+.|||||+|++..... ..+.++ +.|+.| |++||++|++||++|+++....+|++|+++.
T Consensus 449 G~~ADlvv~D~~~~~~~--~~~~~~--~~~~~g------i~~v~v~G~~v~~~g~~~~~~~~G~~lr~~~ 508 (509)
T PRK09061 449 GADADIVVFDPETITDR--ATFEDP--NRPSEG------VRHVLVNGVPVVSNGELVRDARPGRPVRRPV 508 (509)
T ss_pred CCCcCEEEEchhhcccc--cccccc--CCCCCC------ceEEEECCEEEEECCEecCCCCCCeEecCCC
Confidence 99999999998753222 122222 455553 8899999999999999987778999998763
No 30
>PRK06687 chlorohydrolase; Validated
Probab=100.00 E-value=2.6e-40 Score=339.42 Aligned_cols=379 Identities=18% Similarity=0.226 Sum_probs=252.5
Q ss_pred EEEEccEEEcCCCc----eeeeEEEeCCEEEEeeCCCCC--CCCceEEecCCCEEeecccccccccccccCC--------
Q 009410 55 ILIKGGTVVNAHHQ----QIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-------- 120 (535)
Q Consensus 55 ~vi~n~~vi~~~~~----~~~~I~I~~G~I~~Vg~~~~~--~~~~~vID~~G~~vlPGlID~H~H~~~~~~g-------- 120 (535)
.+|+|++|++++.. ++++|+|+||+|++|++.... +...++||+.|++|+|||||+|+|+++....
T Consensus 2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~~~~~~~viD~~g~~v~PGlIn~H~H~~~~~~rg~~~~~~~ 81 (419)
T PRK06687 2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAFLEQAEQIIDYQGAWIMPGLVNCHTHSAMTGLRGIRDDSNL 81 (419)
T ss_pred cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCcccccccccCeEEeCCCCEEccceeeeccCCCccccccccCCCCH
Confidence 57999999997752 578999999999999985432 2357899999999999999999999887321
Q ss_pred -------------CCchhhhHH----HHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChh
Q 009410 121 -------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEV 183 (535)
Q Consensus 121 -------------~~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (535)
..+++..+. +..+++++||||++|+...........++...+.+.+..+...++........+
T Consensus 82 ~~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~~~~~~~~~~ 161 (419)
T PRK06687 82 HEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNPNGVDIQQIYQVVKTSKMRCYFSPTLFSSETETTAE 161 (419)
T ss_pred HHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhhccccccHHHHHHHHHHhCCceEeccccccCCcccHHH
Confidence 012222222 233458999999999864322234555666666655543322221111111222
Q ss_pred hHHHHHHHHHH---cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChh-hHHHHHHHHHHcCCCCcccc
Q 009410 184 VSDEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 184 ~~~~~~~~~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~-~~~~~~~~~~~~g~~~~~~~ 259 (535)
..++..++.++ .+...+++++.++..+.++++.++++++.|+++|+++.+|+.+.. ......+ ..|...
T Consensus 162 ~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e~~~e~~~~~~---~~g~~~---- 234 (419)
T PRK06687 162 TISRTRSIIDEILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGIILK---RYGKRP---- 234 (419)
T ss_pred HHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HHCcCH----
Confidence 33334444322 234558888888888899999999999999999999999996543 2222222 122110
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (535)
+ +.+.-....+.++.+.|+...++ ++++++++.|+.++.||.++ +..+...
T Consensus 235 ------------~-~~l~~~g~l~~~~~~~H~~~~~~-~~~~~la~~g~~v~~~P~sn-------------~~l~~g~-- 285 (419)
T PRK06687 235 ------------L-AFLEELGYLDHPSVFAHGVELNE-REIERLASSQVAIAHNPISN-------------LKLASGI-- 285 (419)
T ss_pred ------------H-HHHHHcCCCCCCeEEEEEecCCH-HHHHHHHHcCCeEEECcHHh-------------hhhccCC--
Confidence 1 11222233456788999998887 88999999999999988752 2222221
Q ss_pred cCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh--cCCCCHHHHHHHHh
Q 009410 340 SPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE--SGQISVTDYVRLTS 417 (535)
Q Consensus 340 ~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~--~~~ls~~eal~~~T 417 (535)
.++++++++|+++++|||+...+.... .|. +++....++++.. ...+++.++|+++|
T Consensus 286 ----------~p~~~~~~~Gv~v~lGtD~~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~aT 344 (419)
T PRK06687 286 ----------APIIQLQKAGVAVGIATDSVASNNNLD-----MFE------EGRTAALLQKMKSGDASQFPIETALKVLT 344 (419)
T ss_pred ----------CcHHHHHHCCCeEEEeCCCCCCCCChh-----HHH------HHHHHHHHhccccCCCccCCHHHHHHHHh
Confidence 228899999999999999744322211 111 2233333322211 12489999999999
Q ss_pred HHHHHHcCCCCCCccccCCCCccEEEEcCCC-ceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccC
Q 009410 418 TECARIFNVYPRKGAILVGSDADIIIFNPNS-SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 418 ~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~-~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
.+||+++|+++++|+|++||.|||+++|.+. +...+ ..++.....|.+. ..+|..||++||+|+++|+++..+
T Consensus 345 ~~gA~~lg~~~~~G~l~~G~~ADlv~~d~~~~~~~~p---~~~~~~~lv~~~~--~~~v~~v~v~G~~v~~~g~~~~~d 418 (419)
T PRK06687 345 IEGAKALGMENQIGSLEVGKQADFLVIQPQGKIHLQP---QENMLSHLVYAVK--SSDVDDVYIAGEQVVKQGQVLTVE 418 (419)
T ss_pred HHHHHHcCCCCCCcccCCCccCCEEEECCCCCCCcCC---ccCHHHHhheeCC--CCCccEEEECCEEEEECCeEecCC
Confidence 9999999998789999999999999999763 32222 1222223344432 358999999999999999998764
No 31
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=100.00 E-value=3.2e-39 Score=331.36 Aligned_cols=379 Identities=20% Similarity=0.248 Sum_probs=251.9
Q ss_pred cEEEEccEEEcCCC----ceeeeEEEeCCEEEEeeCCCC--CCCCceEEecCCCEEeecccccccccccccC-C------
Q 009410 54 KILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNIN--VGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G------ 120 (535)
Q Consensus 54 ~~vi~n~~vi~~~~----~~~~~I~I~~G~I~~Vg~~~~--~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g------ 120 (535)
+++|+|++|++++. .++++|+|+||+|++||+... .+++.++||++|++|+|||||+|+|+++.+. |
T Consensus 2 ~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~~~~~~~viD~~g~~i~PGlVn~H~H~~~~~~rg~~~~~~ 81 (435)
T PRK15493 2 KTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFASDFEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRGIGDDML 81 (435)
T ss_pred eEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCccccccCCCCeEEeCCCCEEccceeecccCccchhhhccCCCCC
Confidence 47999999998764 258899999999999998532 2335789999999999999999999976521 1
Q ss_pred --------------CCchhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceee-eeecCC
Q 009410 121 --------------SETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-AITKWD 181 (535)
Q Consensus 121 --------------~~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 181 (535)
..+++..+ .+..+++++||||+.|+............+...+.+.+..+....+. ......
T Consensus 82 l~~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~~~~~ 161 (435)
T PRK15493 82 LQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGTKEDE 161 (435)
T ss_pred HHHHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEccccccccCHHHHHHHHHHcCCcEEEeeeecCCCCCccH
Confidence 01122221 12345689999999998643322233445555566656433322211 111111
Q ss_pred hhhHHHHHHHHHH-cC-CCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCCCCccc
Q 009410 182 EVVSDEMEVMVKE-KG-INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGITGPEG 258 (535)
Q Consensus 182 ~~~~~~~~~~~~~-~g-~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~~~~~~ 258 (535)
.+..++...+.+. .+ .+.++..+.++..+.++++.++++.+.|+++|+++++|+.+. .......+ ..|...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~t~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~---~~g~~~--- 235 (435)
T PRK15493 162 KKAIEEAEKYVKRYYNESGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDIEA---QYGKRP--- 235 (435)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEeCCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HhCCCH---
Confidence 2223333333322 12 355788888888888999999999999999999999999544 32222221 122211
Q ss_pred ccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeE
Q 009410 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (535)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (535)
++ .+.-....+.++.+.|+...++ ++++++++.|+.++.||..+ +..+..+
T Consensus 236 -------------~~-~l~~~Gll~~~~~~~H~~~l~~-~d~~~la~~g~~v~~~P~sn-------------~~l~~g~- 286 (435)
T PRK15493 236 -------------VE-YAASCGLFKRPTVIAHGVVLND-NERAFLAEHDVRVAHNPNSN-------------LKLGSGI- 286 (435)
T ss_pred -------------HH-HHHHcCCCCCCcEEEEeecCCH-HHHHHHHHcCCeEEEChHHH-------------HHHhcCc-
Confidence 11 1222234466788999999887 88999999999999998752 2122221
Q ss_pred EcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh--cCCCCHHHHHHHH
Q 009410 339 MSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE--SGQISVTDYVRLT 416 (535)
Q Consensus 339 ~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~--~~~ls~~eal~~~ 416 (535)
.++++++++|+++++|||+...+...+ .|. ++++....++... ...++++++++++
T Consensus 287 -----------~p~~~~~~~Gv~v~lGtD~~~~~~~~d-----~~~------~~~~a~~~~~~~~~~~~~~~~~~~l~~a 344 (435)
T PRK15493 287 -----------ANVKAMLEAGIKVGIATDSVASNNNLD-----MFE------EMRIATLLQKGIHQDATALPVETALTLA 344 (435)
T ss_pred -----------ccHHHHHHCCCeEEEccCccccCCCcC-----HHH------HHHHHHHHHhhccCCCCcCCHHHHHHHH
Confidence 238899999999999999754322211 122 3444444443332 2469999999999
Q ss_pred hHHHHHHcCCCCCCccccCCCCccEEEEcCCC-ceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccC
Q 009410 417 STECARIFNVYPRKGAILVGSDADIIIFNPNS-SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 417 T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~-~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
|.+||+++|++ +.|+|++||.||||++|.+. +...+..++.+. ..|.+. ..+|..||++|++|+++|+++..+
T Consensus 345 T~~gA~~lg~~-~~G~l~~G~~ADlvv~d~~~~~~~~p~~d~~~~---lv~~~~--~~~V~~v~V~G~~v~~~g~~~~~d 418 (435)
T PRK15493 345 TKGAAEVIGMK-QTGSLEVGKCADFITIDPSNKPHLQPADEVLSH---LVYAAS--GKDISDVIINGKRVVWNGECKTLD 418 (435)
T ss_pred hHHHHHHcCCC-CCCccCCCCcCCEEEEcCCCCCCcCCccChHHh---EEEeCC--CCCccEEEECCEEEEECCeECCCC
Confidence 99999999995 58999999999999999743 323333333322 233221 247999999999999999999876
No 32
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=100.00 E-value=1.4e-38 Score=325.26 Aligned_cols=356 Identities=22% Similarity=0.254 Sum_probs=256.5
Q ss_pred cEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHH
Q 009410 54 KILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (535)
Q Consensus 54 ~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~ 131 (535)
+++|+|++|+++.+ ...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+... ... ....
T Consensus 1 d~~i~n~~v~~~~~~~~~~~~i~I~~g~I~~i~~~~~-~~~~~~iD~~G~~v~PG~iD~H~H~~~~--~~~-----~~~~ 72 (415)
T cd01297 1 DLVIRNGTVVDGTGAPPFTADVGIRDGRIAAIGPILS-TSAREVIDAAGLVVAPGFIDVHTHYDGQ--VFW-----DPDL 72 (415)
T ss_pred CEEEECCEEECCCCCccccceEEEECCEEEEEecCCC-CCCCeEEECCCCEEccCEeeeeecCCcc--ccc-----Ccch
Confidence 47899999999865 367899999999999987543 2357899999999999999999999765 211 1226
Q ss_pred HHHHhCCcEEEeccccC---CCCCh------H-----------------HHHHHHHHHh-cc-cccccc---eeeeee--
Q 009410 132 AAALAGGTTMHIDFVIP---INGSL------T-----------------AGFEAYEKKA-KN-SCMDYG---FHMAIT-- 178 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~~~---~~~~~------~-----------------~~~~~~~~~~-~~-~~~~~~---~~~~~~-- 178 (535)
+.++.+||||++++... ..... . +.++.+.+.. .. ..+++. ++....
T Consensus 73 ~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~~ 152 (415)
T cd01297 73 RPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWGWATFAEYLDALEARPPAVNVAALVGHAALRRA 152 (415)
T ss_pred hhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCCCCCHHHHHHHHHhcCCCcCeeeccCcHHHHHH
Confidence 67899999999987431 11100 0 2223333333 22 355655 443332
Q ss_pred -------cCChhhHHHHHHHHH---HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHH
Q 009410 179 -------KWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRM 248 (535)
Q Consensus 179 -------~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~ 248 (535)
..+.+..+++..+.+ +.|+.++|.+..|......+.+.+.++++.|+++|.++.+|+++..
T Consensus 153 ~~g~~~~~~~~~~~~~~~~l~~~al~~Ga~g~~~~~~y~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~--------- 223 (415)
T cd01297 153 VMGLDAREATEEELAKMRELLREALEAGALGISTGLAYAPRLYAGTAELVALARVAARYGGVYQTHVRYEG--------- 223 (415)
T ss_pred HhCcCCCCCCHHHHHHHHHHHHHHHHCCCeEEEcccccCCcccCCHHHHHHHHHHHHHcCCEEEEEECccc---------
Confidence 123345566666642 4799999987766422356899999999999999999999998653
Q ss_pred HHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHH---------HHHHHHHHHcCCcEEeccccceE
Q 009410 249 IELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDA---------MEEIAKARKAGQRVIGEPVVSGL 319 (535)
Q Consensus 249 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~---------~~~~~~~~~~g~~v~~~~~~~~~ 319 (535)
..+...+.+++++++..+.++++.|+++... .+.++.+++.|++|+++++|+++
T Consensus 224 -----------------~~e~~av~~~~~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~i~~a~~~G~~v~~e~~p~~~ 286 (415)
T cd01297 224 -----------------DSILEALDELLRLGRETGRPVHISHLKSAGAPNWGKIDRLLALIEAARAEGLQVTADVYPYGA 286 (415)
T ss_pred -----------------ccHHHHHHHHHHHHHHhCCCEEEEEEecCCCcccchHHHHHHHHHHHHHhCCcEEEEeCCCCC
Confidence 1234668888999999999999999998877 78888899999999999888655
Q ss_pred eeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHH
Q 009410 320 VLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWD 399 (535)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~ 399 (535)
.+ ...++.+++. ..++++||+.+.+.. +...+ + .+..++.
T Consensus 287 ~~---------------------------~~~~~~l~~~-~~~~i~SDh~~~~~~--------~~~~~-~---~~~~~l~ 326 (415)
T cd01297 287 GS---------------------------EDDVRRIMAH-PVVMGGSDGGALGKP--------HPRSY-G---DFTRVLG 326 (415)
T ss_pred Cc---------------------------HHHHHHHHcC-CCceeeeCCCcCCCC--------Ccchh-C---CHHHHHH
Confidence 32 1346667766 899999999885310 11011 1 1444554
Q ss_pred HHHhcC-CCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEE
Q 009410 400 TMVESG-QISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVT 478 (535)
Q Consensus 400 ~~~~~~-~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v 478 (535)
..+... .++++++++++|.|||++||+. ++|+|++|+.|||||+|.+.....+. +.++... ...|.+|
T Consensus 327 ~~~~~~~~~~~~~~~~~~t~~pA~~~gl~-~~G~l~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~--~~~v~~v 395 (415)
T cd01297 327 HYVRERKLLSLEEAVRKMTGLPARVFGLA-DRGRIAPGYRADIVVFDPDTLADRAT--------FTRPNQP--AEGIEAV 395 (415)
T ss_pred HHhcccCCCCHHHHHHHHHHHHHHHhCCC-CCceeCCCCCCCEEEEcccccccccc--------hhhhccC--CCCceEE
Confidence 444333 4999999999999999999995 56999999999999999886544432 1122111 2369999
Q ss_pred EECCEEEEECCeeccc
Q 009410 479 IAGGRVVWENDELNVV 494 (535)
Q Consensus 479 ~~~Gr~V~~~~~~~~~ 494 (535)
|++|++||++++++..
T Consensus 396 iv~G~~v~~~~~~~~~ 411 (415)
T cd01297 396 LVNGVPVVRDGAFTGA 411 (415)
T ss_pred EECCEEEEECCEECCC
Confidence 9999999999998863
No 33
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=100.00 E-value=1.1e-38 Score=328.39 Aligned_cols=372 Identities=26% Similarity=0.348 Sum_probs=245.0
Q ss_pred EEEEccEEEcCC---CceeeeEEEeCCEEEEeeCCCCCC--CCceEEecCCCEEeecccccccccccccC-CC-------
Q 009410 55 ILIKGGTVVNAH---HQQIADVYVEDGIVVAVQPNINVG--DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS------- 121 (535)
Q Consensus 55 ~vi~n~~vi~~~---~~~~~~I~I~~G~I~~Vg~~~~~~--~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~------- 121 (535)
++|+|++|++++ ..++++|+|+||||++|++..+.+ .+.++||++|++|+|||||+|+|+..... +.
T Consensus 1 ~~i~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~~~~~~~ 80 (411)
T cd01298 1 ILIRNGTIVTTDPRRVLEDGDVLVEDGRIVAVGPALPLPAYPADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADDLPLM 80 (411)
T ss_pred CeEEeeEEEEeCCcceeecceEEEECCEEEEecCccccccCCcCeEEeCCCCEEccCccccccchhhHHhhcccCCCCHH
Confidence 479999999975 346899999999999999865432 46889999999999999999999875311 11
Q ss_pred -------------CchhhhHH----HHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeee---cCC
Q 009410 122 -------------ETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT---KWD 181 (535)
Q Consensus 122 -------------~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 181 (535)
.++++++. .+..++++||||++|+..... ....+.....+.+....+....... ...
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~---~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~ 157 (411)
T cd01298 81 EWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMYFFYP---DAVAEAAEELGIRAVLGRGIMDLGTEDVEET 157 (411)
T ss_pred HHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECccccch---HHHHHHHHHhCCeEEEEcceecCCCcccccH
Confidence 12233332 334467899999999865432 2333334344444333222211110 011
Q ss_pred hhhHHHHHHHHHH---cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChh-hHHHHHHHHHHcCCCCcc
Q 009410 182 EVVSDEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELGITGPE 257 (535)
Q Consensus 182 ~~~~~~~~~~~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~-~~~~~~~~~~~~g~~~~~ 257 (535)
.+..++..++.++ .|.+.+|+++..++....+++.+.++++.|+++|+++.+|+.+.. ......+ ..|...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~---~~~~~~-- 232 (411)
T cd01298 158 EEALAEAERLIREWHGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETEDEVEESLE---KYGKRP-- 232 (411)
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEeCCCCccCCHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHH---HhCCCH--
Confidence 2233344443322 247788988887766678899999999999999999999985442 2222221 112111
Q ss_pred cccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcccccee
Q 009410 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (535)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (535)
+..+.+ ....+.++.+.|+....+ +.++++++.|+.++.||..+. ..+..
T Consensus 233 --------------~~~~~~-~~~~~~~~~i~H~~~l~~-~~~~~l~~~gi~~~~~p~~~~-------------~~~~~- 282 (411)
T cd01298 233 --------------VEYLEE-LGLLGPDVVLAHCVWLTD-EEIELLAETGTGVAHNPASNM-------------KLASG- 282 (411)
T ss_pred --------------HHHHHH-cCCCCCCeEEEEecCCCH-HHHHHHHHcCCeEEEChHHhh-------------hhhhC-
Confidence 111111 122356778899988877 889999999998888876421 11111
Q ss_pred EEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh--cCCCCHHHHHHH
Q 009410 338 VMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE--SGQISVTDYVRL 415 (535)
Q Consensus 338 ~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~--~~~ls~~eal~~ 415 (535)
. .++++++++|+++++|||+.......+ +|. +..+......... ..+++++++|++
T Consensus 283 --~---------~~~~~~~~~Gv~~~~GsD~~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~~~~~al~~ 340 (411)
T cd01298 283 --I---------APVPEMLEAGVNVGLGTDGAASNNNLD-----MFE------EMRLAALLQKLAHGDPTALPAEEALEM 340 (411)
T ss_pred --C---------CCHHHHHHCCCcEEEeCCCCccCCCcC-----HHH------HHHHHHHHhccccCCCCcCCHHHHHHH
Confidence 1 228899999999999999754321111 111 2222222211111 125999999999
Q ss_pred HhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeec
Q 009410 416 TSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELN 492 (535)
Q Consensus 416 ~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~ 492 (535)
+|.|||+++|++ ++|+|++||.|||||+|.+.++.++.+++.+...+... ..+|..||++|++||++|+++
T Consensus 341 ~T~~~A~~lg~~-~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~G~~v~~~~~~~ 411 (411)
T cd01298 341 ATIGGAKALGLD-EIGSLEVGKKADLILIDLDGPHLLPVHDPISHLVYSAN-----GGDVDTVIVNGRVVMEDGELL 411 (411)
T ss_pred HHhhHHHHhCCc-cCCCcCCCccCCEEEEeCCCCccCCccchhhHheEecC-----CCCeeEEEECCEEEEECCEeC
Confidence 999999999997 78999999999999999988777665555444323222 358999999999999999874
No 34
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=7e-38 Score=324.21 Aligned_cols=379 Identities=22% Similarity=0.294 Sum_probs=243.3
Q ss_pred cEEEEccEEEcCCC---ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-CCC-------
Q 009410 54 KILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GSE------- 122 (535)
Q Consensus 54 ~~vi~n~~vi~~~~---~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~~------- 122 (535)
+++|+|++|+++++ .++++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+...+. +..
T Consensus 2 ~~~i~~~~vi~~~~~~~~~~g~V~I~dg~I~~vg~~~~~~~~~~vID~~G~~vlPGlId~H~H~~~~~~~g~~~~~~~~~ 81 (445)
T PRK07228 2 TILIKNAGIVTMNAKREIVDGDVLIEDDRIAAVGDRLDLEDYDDHIDATGKVVIPGLIQGHIHLCQTLFRGIADDLELLD 81 (445)
T ss_pred eEEEEccEEEecCCCcEecccEEEEECCEEEEecCCcccCcCCeEEeCCCCEEecCEEecccCCccccceeccCCCCHHH
Confidence 48999999999774 4689999999999999986543336889999999999999999999986521 110
Q ss_pred -------------chhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccc-----cceee--eee
Q 009410 123 -------------TIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMD-----YGFHM--AIT 178 (535)
Q Consensus 123 -------------~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--~~~ 178 (535)
++++.. .....++.+||||++|+..... ....++.....+.+.... ++... ...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~~~~~--~~~~~~a~~~~g~r~~~~~~~~~~~~~~p~~~~ 159 (445)
T PRK07228 82 WLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDMESVHH--TDSAFEAAGESGIRAVLGKVMMDYGDDVPEGLQ 159 (445)
T ss_pred HHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEccccccC--hHHHHHHHHHcCCeEEEecceecCCcCCCcccc
Confidence 111111 2233457999999999864321 234445555444442221 11110 000
Q ss_pred cCChhhHHHHHHHHHH-cCCC--EEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009410 179 KWDEVVSDEMEVMVKE-KGIN--SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (535)
Q Consensus 179 ~~~~~~~~~~~~~~~~-~g~~--~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (535)
....+..++...+++. .|.. .+...+.+.....++++.++++++.|+++|+++++|+.+.......... ..|...
T Consensus 160 ~~~~~~l~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~--~~g~~~ 237 (445)
T PRK07228 160 EDTEASLAESVRLLEKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVEE--ETGMRN 237 (445)
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH--HhCCCH
Confidence 1112233344444422 2332 3333334445556789999999999999999999999544322111111 123211
Q ss_pred cccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccc
Q 009410 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA 335 (535)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (535)
+. .+.-....+.++.+.|+...+. +.++++++.|+.++.||..+. ..+.
T Consensus 238 ----------------~~-~l~~~g~~~~~~~l~H~~~~~~-~~~~~~~~~g~~v~~~P~~~~-------------~~~~ 286 (445)
T PRK07228 238 ----------------IH-YLDEVGLTGEDLILAHCVWLDE-EEREILAETGTHVTHCPSSNL-------------KLAS 286 (445)
T ss_pred ----------------HH-HHHHCCCCCCCcEEEEEecCCH-HHHHHHHHcCCeEEEChHHhh-------------hccc
Confidence 11 1111223456889999998776 788999999999998886421 1111
Q ss_pred eeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh--cCCCCHHHHH
Q 009410 336 KYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE--SGQISVTDYV 413 (535)
Q Consensus 336 ~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~--~~~ls~~eal 413 (535)
. ..+++++++.|+++++|||+.+...... +|. +..+...+++... ...++++++|
T Consensus 287 ~------------~~p~~~~~~~Gv~v~lGtD~~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~s~~~al 343 (445)
T PRK07228 287 G------------IAPVPDLLERGINVALGADGAPCNNTLD-----PFT------EMRQAALIQKVDRLGPTAMPARTVF 343 (445)
T ss_pred c------------cCcHHHHHHCCCeEEEcCCCCccCCCcc-----HHH------HHHHHHHHhhhccCCCcccCHHHHH
Confidence 1 1338999999999999999765432211 222 2233322322211 1358999999
Q ss_pred HHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecC--CccccCCCCCCCCeeEeeEEEEEEECCEEEEECCee
Q 009410 414 RLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITAR--SHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDEL 491 (535)
Q Consensus 414 ~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~--~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~ 491 (535)
+++|.|||+++|+++++|+|++||.|||||+|.+.+...+.+ ++.....+... ..+|..||++|++||++|++
T Consensus 344 ~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~p~~~~~~~~~~~~~~~-----~~~v~~v~v~G~~v~~~g~~ 418 (445)
T PRK07228 344 EMATLGGAKAAGFEDEIGSLEEGKKADLAILDLDGLHATPSHGVDVLSHLVYAAH-----GSDVETTMVDGKIVMEDGEL 418 (445)
T ss_pred HHHHHHHHHHhCCCCCccccCCCCccCEEEEcCCCcccCCCcccCHHHHhheeCC-----CCCeeEEEECCEEEEECCeE
Confidence 999999999999988899999999999999998876544432 21111111111 35799999999999999999
Q ss_pred cccC
Q 009410 492 NVVP 495 (535)
Q Consensus 492 ~~~~ 495 (535)
+..+
T Consensus 419 ~~~d 422 (445)
T PRK07228 419 TTID 422 (445)
T ss_pred ccCC
Confidence 8765
No 35
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=100.00 E-value=7e-37 Score=301.33 Aligned_cols=337 Identities=25% Similarity=0.345 Sum_probs=265.0
Q ss_pred CEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-ccccccceeeeee
Q 009410 101 KFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAIT 178 (535)
Q Consensus 101 ~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 178 (535)
.+|+|||||.|+|+..+ |....+++.+..++++++||||++||....+. ...+.++...+... ...++++++.+..
T Consensus 2 ~~vlPG~ID~HvH~r~p--g~~~~ed~~sgs~AAa~GGvTtv~dmPnt~P~~~~~~~~~~~~~~a~~~s~vd~~~~~~~~ 79 (344)
T cd01316 2 TIRLPGLIDVHVHLREP--GATHKEDFASGTKAALAGGFTMVRAMPNTNPSIVDVASLKLVQSLAQAKARCDYAFSIGAT 79 (344)
T ss_pred eEEeCCeEEeeeccCCC--CcCCcChHHHHHHHHHhCCCeEEEECCCCCCCCCCHHHHHHHHHHhccCcEEeEEEEeeec
Confidence 47999999999999988 77789999999999999999999999754332 45566666555554 4688898887665
Q ss_pred cCChhhHHHHHHHHHHcCCCEEEEEeecCCCC-cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009410 179 KWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (535)
Q Consensus 179 ~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~-~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (535)
..+.+ ++.++. . ...++|+|..+.... ..+..........+...+.++..|++..
T Consensus 80 ~~~~~---~~~~l~-~-~~~g~k~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~e~~------------------- 135 (344)
T cd01316 80 STNAA---TVGELA-S-EAVGLKFYLNETFSTLILDKITAWASHFNAWPSTKPIVTHAKSQ------------------- 135 (344)
T ss_pred CCCHH---HHHHHH-h-ccCeEEEEECCCCCCCccchHHHHHHHHHhcccCCCeEEehhhH-------------------
Confidence 54432 233333 2 256788876432111 1122222222333444466777776532
Q ss_pred cccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcccccee
Q 009410 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (535)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (535)
.+.+++.+++..+.++|+.|.++.+.++.++.+++.|++|++++++||++++.+.+.. ..+
T Consensus 136 -------------~~~~~l~la~~~g~~lhi~HiSt~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~------~~~ 196 (344)
T cd01316 136 -------------TLAAVLLLASLHNRSIHICHVSSKEEINLIRLAKARGLKVTCEVSPHHLFLSQDDLPR------GQY 196 (344)
T ss_pred -------------HHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEechHHeeccHHHhhc------CCc
Confidence 2445678888899999999999999999999999999999999999999999987743 468
Q ss_pred EEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHH
Q 009410 338 VMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVR 414 (535)
Q Consensus 338 ~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~ 414 (535)
+++||+|...+++++|+++. ...+++|||+|+....+.. + .+|+ |++..+++++. ++.++++++.++++
T Consensus 197 k~~PPLR~~~dr~aL~~~l~--~id~i~SDHaP~~~~~K~~---~--~a~~G~~g~e~~lpl~~~-~v~~~~i~l~~l~~ 268 (344)
T cd01316 197 EVRPFLPTREDQEALWENLD--YIDCFATDHAPHTLAEKTG---N--KPPPGFPGVETSLPLLLT-AVHEGRLTIEDIVD 268 (344)
T ss_pred eeCCCCcCHHHHHHHHHHHh--cCCEEEcCCCCCCHHHhcC---C--CCCCCcccHHHHHHHHHH-HHHcCCCCHHHHHH
Confidence 99999999999999999996 4789999999998776532 2 4444 99999999995 78888899999999
Q ss_pred HHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeeccc
Q 009410 415 LTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 494 (535)
Q Consensus 415 ~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~ 494 (535)
..+.|||++||+.. + .+||||+|.+..|.++++.+.+...|+||+|+.+.++|.+||++|++||++|+++..
T Consensus 269 ~~s~nPAk~~gl~~-------~-~~~lvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~ti~rG~~v~~~g~~~~~ 340 (344)
T cd01316 269 RLHTNPKRIFNLPP-------Q-SDTYVEVDLDEEWTIPKNPLQSKKGWTPFEGKKVKGKVQRVVLRGETAFIDGEIVAP 340 (344)
T ss_pred HHHHhHHHHhCCCC-------C-CCCEEEEeCCCcEEEChhhccccCCCCCCCCCEEeeEEEEEEECCEEEEECCEEccC
Confidence 99999999999843 2 347999999999999999999999999999999999999999999999999998876
Q ss_pred CCCc
Q 009410 495 PGSG 498 (535)
Q Consensus 495 ~~~~ 498 (535)
.+.|
T Consensus 341 ~~~G 344 (344)
T cd01316 341 PGFG 344 (344)
T ss_pred CCCC
Confidence 5443
No 36
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=2.3e-37 Score=319.50 Aligned_cols=378 Identities=19% Similarity=0.214 Sum_probs=247.5
Q ss_pred cccEEEEccEEEcCCC----ceeeeEEEeCCEEEEeeCCCCC---CCCceEEecCCCEEeecccccccccccccC-CC--
Q 009410 52 SSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS-- 121 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~----~~~~~I~I~~G~I~~Vg~~~~~---~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~-- 121 (535)
..+++|+|+.|++++. .++++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|++.... |.
T Consensus 6 ~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~g~~~ 85 (443)
T PRK09045 6 PVDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARYAAAETVELPDHVLIPGLINAHTHAAMSLLRGLAD 85 (443)
T ss_pred cccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCcccccccCCcceEEeCCCCEEecCEeccccChhhHhhhhccC
Confidence 3589999999999763 2688999999999999986432 235789999999999999999999986521 11
Q ss_pred -------------------CchhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee-
Q 009410 122 -------------------ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI- 177 (535)
Q Consensus 122 -------------------~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 177 (535)
.+++..+ .....++++||||++|+... .....+...+.+.+..+........
T Consensus 86 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~~~----~~~~~~~~~~~G~R~~~~~~~~~~~~ 161 (443)
T PRK09045 86 DLPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMYFF----PEAAAEAAHQAGMRAQIGMPVLDFPT 161 (443)
T ss_pred CCCHHHHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecccc----HHHHHHHHHHcCCeEEEecccccCCC
Confidence 0111111 23345689999999997421 1223444444444433322211100
Q ss_pred --ecCChhhHHHHHHHHH-HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCC
Q 009410 178 --TKWDEVVSDEMEVMVK-EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGI 253 (535)
Q Consensus 178 --~~~~~~~~~~~~~~~~-~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~ 253 (535)
....++..+....+.+ ..+.+.+++.+.+++...++++.++++++.|+++|+++.+|+... ...... +...|.
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~---~~~~g~ 238 (443)
T PRK09045 162 AWASDADEYLAKGLELHDQWRHHPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLHETAQEIADS---LKQHGQ 238 (443)
T ss_pred ccccCHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCEEEeecCcHHHHHHH---HHHhCC
Confidence 0111222232223322 245677888888887788899999999999999999999998532 222222 222232
Q ss_pred CCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccc
Q 009410 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVT 333 (535)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 333 (535)
. .+.++.+ ....+.++.+.|+...+. ++++++++.|+.++.||..+ +..
T Consensus 239 ~----------------~~~~l~~-~g~l~~r~~~~H~~~l~~-~~~~~la~~g~~i~~~P~~~-------------~~~ 287 (443)
T PRK09045 239 R----------------PLARLAR-LGLLGPRLIAVHMTQLTD-AEIALLAETGCSVVHCPESN-------------LKL 287 (443)
T ss_pred C----------------HHHHHHH-cCCCCCCeEEEEecCCCH-HHHHHHHHcCCeEEECHHHH-------------hhh
Confidence 1 1222222 234456788899998877 88999999999999888642 111
Q ss_pred cceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh--cCCCCHHH
Q 009410 334 AAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE--SGQISVTD 411 (535)
Q Consensus 334 ~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~--~~~ls~~e 411 (535)
+.. ..++++++++|+++++|||+.+.....+ +|. ++.+.....+... ..++++++
T Consensus 288 ~~~------------~~~~~~l~~~Gv~v~lGtD~~~~~~~~~-----~~~------~~~~a~~~~~~~~~~~~~~~~~~ 344 (443)
T PRK09045 288 ASG------------FCPVAKLLQAGVNVALGTDGAASNNDLD-----LFG------EMRTAALLAKAVAGDATALPAHT 344 (443)
T ss_pred ccC------------CCcHHHHHHCCCeEEEecCCCCCCCCcc-----HHH------HHHHHHHHHhhccCCCCcCCHHH
Confidence 111 1238899999999999999754322211 121 2333333322221 34599999
Q ss_pred HHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCee
Q 009410 412 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDEL 491 (535)
Q Consensus 412 al~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~ 491 (535)
+|+++|.|||+++|+++++|+|++||.|||||+|.+++...+.. +.....++... ..+|..||++|++||++|++
T Consensus 345 al~~~T~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~p~~---~~~~~lv~~~~--~~~v~~v~v~G~~v~~~g~~ 419 (443)
T PRK09045 345 ALRMATLNGARALGLDDEIGSLEPGKQADLVAVDLSGLETQPVY---DPVSQLVYAAG--REQVSHVWVAGKQLLDDREL 419 (443)
T ss_pred HHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEeCCCCCcCCcc---ChHhHhhEeCC--CCCccEEEECCEEEEECCcC
Confidence 99999999999999988899999999999999998865332211 11111222211 35899999999999999999
Q ss_pred cccC
Q 009410 492 NVVP 495 (535)
Q Consensus 492 ~~~~ 495 (535)
++.+
T Consensus 420 ~~~d 423 (443)
T PRK09045 420 TTLD 423 (443)
T ss_pred CCCC
Confidence 9876
No 37
>PRK08204 hypothetical protein; Provisional
Probab=100.00 E-value=4.8e-37 Score=318.55 Aligned_cols=368 Identities=21% Similarity=0.295 Sum_probs=237.7
Q ss_pred ccEEEEccEEEcCCC----ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-C-------
Q 009410 53 SKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G------- 120 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~----~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g------- 120 (535)
.+++|+|++|++.++ ..+++|+|+||+|++|++..+.+ +.++||++|++|+|||||+|+|+.+... +
T Consensus 2 ~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~~~-~~~viD~~g~~v~PGlId~H~H~~~~~~~~~~~~~~~ 80 (449)
T PRK08204 2 KRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIEAP-DAEVVDARGMIVMPGLVDTHRHTWQSVLRGIGADWTL 80 (449)
T ss_pred CcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCCCC-CCeEEeCCCCEEecCEEeeeeccchhhhccccCCCcH
Confidence 357899999997553 36889999999999999865433 5789999999999999999999864311 0
Q ss_pred -------------CCchhhhH----HHHHHHHhCCcEEEeccccCCC--CChHHHHHHHHHHhcccccccceeeeeecC-
Q 009410 121 -------------SETIDDFF----SGQAAALAGGTTMHIDFVIPIN--GSLTAGFEAYEKKAKNSCMDYGFHMAITKW- 180 (535)
Q Consensus 121 -------------~~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 180 (535)
..++++.. .....++++||||++|+..... ......++.....+.+..+..+.......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~G~r~~~~~~~~~~~~~~~ 160 (449)
T PRK08204 81 QTYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSHINNSPEHADAAIRGLAEAGIRAVFAHGSPGPSPYWP 160 (449)
T ss_pred HHHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecccccCChhHHHHHHHHHHHcCCeEEEEccccCCCCCCC
Confidence 01111111 2334678999999999754332 123344455555444432222111110100
Q ss_pred ---ChhhHHHHHHHHH--HcCCC-EEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhh--HHHHHHHHHHcC
Q 009410 181 ---DEVVSDEMEVMVK--EKGIN-SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA--VFEGQKRMIELG 252 (535)
Q Consensus 181 ---~~~~~~~~~~~~~--~~g~~-~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~--~~~~~~~~~~~g 252 (535)
..+..+++..+.+ ..+.+ .+.......+....+++.+.++++.|+++|+++.+|+.+... ....++.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~l~~-- 238 (449)
T PRK08204 161 FDSVPHPREDIRRVKKRYFSSDDGLLTLGLAIRGPEFSSWEVARADFRLARELGLPISMHQGFGPWGATPRGVEQLHD-- 238 (449)
T ss_pred cchhhhhHHHHHHHHHhhccCCCCceEEEEecCCcccCCHHHHHHHHHHHHHcCCcEEEEEcCCCcccCCCHHHHHHH--
Confidence 1122223333222 12222 344444445556678899999999999999999999953311 0011111111
Q ss_pred CCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcc
Q 009410 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332 (535)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 332 (535)
....+.++.+.|+...+. ++++++++.|+.++.||.... .
T Consensus 239 --------------------------~g~~~~~~~i~H~~~~~~-~~~~~la~~g~~v~~~P~~~~-------------~ 278 (449)
T PRK08204 239 --------------------------AGLLGPDLNLVHGNDLSD-DELKLLADSGGSFSVTPEIEM-------------M 278 (449)
T ss_pred --------------------------CCCCCCCeEEEecCCCCH-HHHHHHHHcCCCEEEChHHHh-------------h
Confidence 123356778999999887 889999999999999886421 1
Q ss_pred ccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHH----------
Q 009410 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMV---------- 402 (535)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~---------- 402 (535)
.+..+ .++++++++|+++++|||+.+..... +|. ++.+....++..
T Consensus 279 ~g~~~------------~~~~~~~~~Gv~v~lGtD~~~~~~~~------~~~------~~~~a~~~~~~~~~~~~~~~~~ 334 (449)
T PRK08204 279 MGHGY------------PVTGRLLAHGVRPSLGVDVVTSTGGD------MFT------QMRFALQAERARDNAVHLREGG 334 (449)
T ss_pred hcCCC------------CcHHHHHhcCCceeeccccCCCCCcC------HHH------HHHHHHHHHHhhcccccccccc
Confidence 11111 22889999999999999965432211 122 222222221111
Q ss_pred ---hcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCee---EeeEEE
Q 009410 403 ---ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRR---VKGKVE 476 (535)
Q Consensus 403 ---~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~---~~~~v~ 476 (535)
...++++.++|+++|.|+|+++|+++++|+|++||.|||||+|.+++...+-. .|+.... ...+|.
T Consensus 335 ~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~ADlvvld~~~~~~~p~~--------dp~~~lv~~~~~~~v~ 406 (449)
T PRK08204 335 MPPPRLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQADLVLIDATDLNLAPVH--------DPVGAVVQSAHPGNVD 406 (449)
T ss_pred cCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCccccCCc--------ChhhhheeccCCCCce
Confidence 13569999999999999999999988899999999999999998866433311 1222221 135899
Q ss_pred EEEECCEEEEECCeecccC
Q 009410 477 VTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 477 ~v~~~Gr~V~~~~~~~~~~ 495 (535)
.||++|++|+++|+++..+
T Consensus 407 ~v~v~G~~v~~~~~~~~~d 425 (449)
T PRK08204 407 SVMVAGRAVKRNGKLLGVD 425 (449)
T ss_pred EEEECCEEEEECCEeccCC
Confidence 9999999999999999875
No 38
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=100.00 E-value=6.7e-37 Score=317.02 Aligned_cols=375 Identities=18% Similarity=0.205 Sum_probs=249.0
Q ss_pred EEEEccEEEcCCC----ceeeeEEEeCCEEEEeeCCCCCC-CCceEEecCCCEEeecccccccccccccC-CC-------
Q 009410 55 ILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS------- 121 (535)
Q Consensus 55 ~vi~n~~vi~~~~----~~~~~I~I~~G~I~~Vg~~~~~~-~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~------- 121 (535)
+++.|+.|+++++ ..+++|+|+||+|++|++....+ ++.++||++|++|+|||||+|+|++.... +.
T Consensus 4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~~~vID~~g~~v~PGlVn~H~H~~~~~~~g~~~~~~~~ 83 (451)
T PRK08203 4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALPQPADEVFDARGHVVTPGLVNTHHHFYQTLTRALPAAQDAE 83 (451)
T ss_pred EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCCCCCCeEEeCCCCEEecceEeccccccchhcccccccCCCc
Confidence 4555578998775 35789999999999999975533 35789999999999999999999987521 11
Q ss_pred --------------CchhhhH----HHHHHHHhCCcEEEeccccCCCC----ChHHHHHHHHHHhcccccccceee----
Q 009410 122 --------------ETIDDFF----SGQAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAKNSCMDYGFHM---- 175 (535)
Q Consensus 122 --------------~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---- 175 (535)
.++++.+ .....++++||||++|+...... .....++...+.+.+..+......
T Consensus 84 ~~~~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~~ 163 (451)
T PRK08203 84 LFPWLTTLYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGMRFHATRGSMSLGES 163 (451)
T ss_pred HHHHHHHHhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccccchHHHHHHHHHHcCCeEEEecceeecCCc
Confidence 0112221 23345688999999998532111 245566677777666443322110
Q ss_pred --eeec-----CChhhHHHHHHHHHHc----CCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHH
Q 009410 176 --AITK-----WDEVVSDEMEVMVKEK----GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFE 243 (535)
Q Consensus 176 --~~~~-----~~~~~~~~~~~~~~~~----g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~ 243 (535)
.... ...+..+..++..+.. ..+.+++.+..++....+++.++++++.|+++|+++++|+... .....
T Consensus 164 ~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~ 243 (451)
T PRK08203 164 DGGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRLGVRLHTHLAETLDEEAF 243 (451)
T ss_pred cCCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHH
Confidence 0000 1122334444444221 1256787777777778899999999999999999999998433 22222
Q ss_pred HHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCc
Q 009410 244 GQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (535)
Q Consensus 244 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~ 323 (535)
.. ...|... ++.+ ......+.++.+.|+...+. ++++++++.|+.++.||....
T Consensus 244 ~~---~~~g~~~----------------~~~l-~~~g~l~~~~~~~H~~~l~~-~~~~~la~~g~~v~~~P~~~~----- 297 (451)
T PRK08203 244 CL---ERFGMRP----------------VDYL-EDLGWLGPDVWLAHCVHLDD-AEIARLARTGTGVAHCPCSNM----- 297 (451)
T ss_pred HH---HHhCCCH----------------HHHH-HHcCCCCCCeEEEEEeCCCH-HHHHHHHhcCCeEEECcHHhh-----
Confidence 22 1123221 2222 12233456788999998887 889999999999998886421
Q ss_pred ccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh
Q 009410 324 SWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE 403 (535)
Q Consensus 324 ~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~ 403 (535)
..+... .++++++++|+++++|||+...+.... +|. ++.+......+..
T Consensus 298 --------~l~~~~------------~~~~~~~~~Gv~v~lGtD~~~~~~~~~-----~~~------~~~~~~~~~~~~~ 346 (451)
T PRK08203 298 --------RLASGI------------APVRELRAAGVPVGLGVDGSASNDGSN-----LIG------EARQALLLQRLRY 346 (451)
T ss_pred --------hhccCC------------CCHHHHHHCCCeEEEecCCCccCCCcC-----HHH------HHHHHHHHhhccc
Confidence 111111 228899999999999999754321111 122 2333333322221
Q ss_pred -cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeE--eeEEEEEEE
Q 009410 404 -SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV--KGKVEVTIA 480 (535)
Q Consensus 404 -~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~--~~~v~~v~~ 480 (535)
...+++.++|+++|.|||+++|++ ++|+|++||.|||||+|.+.+...+ .++|+.+..+ ..+|..||+
T Consensus 347 ~~~~i~~~~~l~~~T~~~A~~lg~~-~~G~l~~G~~ADlvv~d~~~~~~~~--------~~~p~~~l~~~~~~~v~~v~v 417 (451)
T PRK08203 347 GPDAMTAREALEWATLGGARVLGRD-DIGSLAPGKLADLALFDLDELRFAG--------AHDPVAALVLCGPPRADRVMV 417 (451)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCC-CCCCcCCCCccCEEEEcCCccccCC--------ccChHHHHHccCCCCccEEEE
Confidence 235999999999999999999996 7899999999999999988763321 2456654433 258999999
Q ss_pred CCEEEEECCeecccC
Q 009410 481 GGRVVWENDELNVVP 495 (535)
Q Consensus 481 ~Gr~V~~~~~~~~~~ 495 (535)
+|++||++|+++..+
T Consensus 418 ~G~~v~~~~~~~~~d 432 (451)
T PRK08203 418 GGRWVVRDGQLTTLD 432 (451)
T ss_pred CCEEEEECCcccCCC
Confidence 999999999988765
No 39
>PRK06380 metal-dependent hydrolase; Provisional
Probab=100.00 E-value=1.5e-36 Score=311.80 Aligned_cols=373 Identities=21% Similarity=0.285 Sum_probs=243.8
Q ss_pred cEEEEccEEEcCCC---ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-C---------
Q 009410 54 KILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G--------- 120 (535)
Q Consensus 54 ~~vi~n~~vi~~~~---~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g--------- 120 (535)
+++|+|++|++++. ..+++|+|+||+|++||+... .+.++||++|++|+|||||+|+|+++... +
T Consensus 2 ~~li~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~--~~~~viD~~g~~v~PG~Vd~H~Hl~~~~~rg~~~~~~l~~ 79 (418)
T PRK06380 2 SILIKNAWIVTQNEKREILQGNVYIEGNKIVYVGDVNE--EADYIIDATGKVVMPGLINTHAHVGMTASKGLFDDVDLEE 79 (418)
T ss_pred eEEEEeeEEEECCCCceeeeeeEEEECCEEEEecCCCC--CCCEEEECCCCEEccCEEeeccCCCccccCCcccCCCHHH
Confidence 47999999998753 357899999999999998543 34689999999999999999999986621 1
Q ss_pred ----------CCchhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee-ecCChhhH
Q 009410 121 ----------SETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEVVS 185 (535)
Q Consensus 121 ----------~~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 185 (535)
..++++++ ....+++++||||++|+... .....+...+.+.+..+.+...... ........
T Consensus 80 ~~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~~~----~~~~~~a~~~~G~r~~~~~~~~~~~~~~~~~~~~ 155 (418)
T PRK06380 80 FLMKTFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLYYS----EDIIAKAAEELGIRAFLSWAVLDEEITTQKGDPL 155 (418)
T ss_pred HHHHHHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEccccC----hHHHHHHHHHhCCeEEEecccccCCcccccchHH
Confidence 11222222 23345689999999998532 2233444455555544433222110 00111122
Q ss_pred HHHHHHHHH-cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCC
Q 009410 186 DEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRP 264 (535)
Q Consensus 186 ~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (535)
+....+.+. .....++..+.+++...++++.++++++.|+++|+++++|+.+... +......+.|...
T Consensus 156 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~--~~~~~~~~~g~~~--------- 224 (418)
T PRK06380 156 NNAENFIREHRNEELVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSETRK--EVYDHVKRTGERP--------- 224 (418)
T ss_pred HHHHHHHHHhcCCCCeEEEEECCCCccCCHHHHHHHHHHHHHcCCCEEEEeCCcHH--HHHHHHHHhCCCH---------
Confidence 222333321 2234466666777778889999999999999999999999965421 2222233334321
Q ss_pred hhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCC
Q 009410 265 PLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIR 344 (535)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 344 (535)
+. .+......+.++.+.|+...+. ++++++++.|+.++.||... +..+.. ..
T Consensus 225 -------ie-~~~~~g~l~~~~~~~H~~~l~~-~d~~~la~~g~~v~~~P~sn-------------~~l~~~--g~---- 276 (418)
T PRK06380 225 -------VE-HLEKIGFLNSKLIAAHCVWATY-HEIKLLSKNGVKVSWNSVSN-------------FKLGTG--GS---- 276 (418)
T ss_pred -------HH-HHHHCCCCCCCeEEEEeecCCH-HHHHHHHHcCCEEEECHHHH-------------HhhccC--CC----
Confidence 11 1222234466788999998876 88999999999999988752 111110 01
Q ss_pred CcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh--cCCCCHHHHHHHHhHHHHH
Q 009410 345 ASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE--SGQISVTDYVRLTSTECAR 422 (535)
Q Consensus 345 ~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~--~~~ls~~eal~~~T~~~A~ 422 (535)
.++++++++|+++++|||+.......+ .|. ++++.....+... ...++++++|+++|.++|+
T Consensus 277 -----~p~~~~~~~Gv~v~lGTD~~~~~~~~d-----~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~ 340 (418)
T PRK06380 277 -----PPIPEMLDNGINVTIGTDSNGSNNSLD-----MFE------AMKFSALSVKNERWDASIIKAQEILDFATINAAK 340 (418)
T ss_pred -----CcHHHHHHCCCeEEEcCCCCcCCCCcC-----HHH------HHHHHHHHhhhccCCCCcCCHHHHHHHHHHHHHH
Confidence 238999999999999999643221111 111 2233222222111 1238999999999999999
Q ss_pred HcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeE---eeEEEEEEECCEEEEECCeecccC
Q 009410 423 IFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV---KGKVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 423 ~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~---~~~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
++|+ +.|+|++||+||||++|.+.+...+.. . ..|+.+... ..+|..||++|++|+++|+++..+
T Consensus 341 ~lg~--~~G~l~~G~~ADlvv~d~~~~~~~p~~-~-----~~~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d 408 (418)
T PRK06380 341 ALEL--NAGSIEVGKLADLVILDARAPNMIPTR-K-----NNIVSNIVYSLNPLNVDHVIVNGKILKENGRLNGFN 408 (418)
T ss_pred HhCC--CCCccCCCccCCEEEEeCCCCccCCCC-c-----cChHHheeecCCCCceeEEEECCEEEEECCeECccC
Confidence 9999 479999999999999998866544311 0 123332222 248999999999999999999876
No 40
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=100.00 E-value=2.3e-36 Score=311.96 Aligned_cols=375 Identities=20% Similarity=0.247 Sum_probs=243.5
Q ss_pred EEEEccEEEcCCC---c-eeeeEEEeCCEEEEeeCCCCC---CCCceEEecCCCEEeecccccccccccccC-CC-----
Q 009410 55 ILIKGGTVVNAHH---Q-QIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS----- 121 (535)
Q Consensus 55 ~vi~n~~vi~~~~---~-~~~~I~I~~G~I~~Vg~~~~~---~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~----- 121 (535)
++|+|++|+++++ . ++++|+|+||+|++|++.... .++.++||++|++|+|||||+|+|+.+.+. |.
T Consensus 2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~~~~~viD~~g~lv~PGfID~H~H~~~~~~rg~~~~~~ 81 (442)
T PRK07203 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKYPDAEFIDAKGKLIMPGLINSHNHIYSGLARGMMANIP 81 (442)
T ss_pred EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhccccCCCeEEeCCCCEEecceeeccccchhhhhcccccccC
Confidence 6899999998543 2 478999999999999964221 235689999999999999999999875421 11
Q ss_pred -------------------CchhhhHH----HHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccccccceee
Q 009410 122 -------------------ETIDDFFS----GQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHM 175 (535)
Q Consensus 122 -------------------~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 175 (535)
.++++++. +...++++||||++|+...... .....++...+.+-+..+.+....
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~d 161 (442)
T PRK07203 82 PPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYIGGSLFTIADAAKKVGLRAMLCYETSD 161 (442)
T ss_pred CCCCHHHHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccccccchHHHHHHHHHHhCCeEEEeccccc
Confidence 11222221 2245689999999998532211 122333444444444333222211
Q ss_pred ee-ecCChhhHHHHHHHHHH-cC--CCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC-hhhHHHHHHHHHH
Q 009410 176 AI-TKWDEVVSDEMEVMVKE-KG--INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GDAVFEGQKRMIE 250 (535)
Q Consensus 176 ~~-~~~~~~~~~~~~~~~~~-~g--~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~-~~~~~~~~~~~~~ 250 (535)
.. .....+..++..++.+. .+ ...+...+.+++.+.++++.++++.+.|+++|+++++|..+ ........+ .
T Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~~e~~~~~~---~ 238 (442)
T PRK07203 162 RDGEKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRGYHIHVAEGIYDVSDSHK---K 238 (442)
T ss_pred CCcchhHHHHHHHHHHHHHHhcCCCCCceEEEEccCCCcCcCHHHHHHHHHHHHHcCCcEEEEecCChHHHHHHHH---H
Confidence 10 00011122222232221 12 23566777778888899999999999999999999999954 333332222 2
Q ss_pred cCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcC
Q 009410 251 LGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (535)
Q Consensus 251 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (535)
.|... ++ .++.....+.++.+.|+...+. ++++.+++.|+.|+.||.+ |
T Consensus 239 ~g~~~----------------v~-~l~~~Gll~~~~~~~H~~~~~~-~d~~~la~~g~~v~~~P~s-------------n 287 (442)
T PRK07203 239 YGKDI----------------VE-RLADFGLLGEKTLAAHCIYLSD-EEIDLLKETDTFVVHNPES-------------N 287 (442)
T ss_pred cCCCH----------------HH-HHHhCCCCCCCcEEEEeecCCH-HHHHHHHhcCCeEEECchh-------------h
Confidence 23221 12 2222334567888999999887 8899999999999999975 2
Q ss_pred ccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh-cCCCCH
Q 009410 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE-SGQISV 409 (535)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~-~~~ls~ 409 (535)
+..+... .++++++++|+++++|||+...+ .|. ++++...+++... ....+.
T Consensus 288 ~~l~~g~------------~p~~~~~~~Gv~v~lGtD~~~~d---------~~~------~~~~a~~~~~~~~~~~~~~~ 340 (442)
T PRK07203 288 MGNAVGY------------NPVLEMIKNGILLGLGTDGYTSD---------MFE------SYKVANFKHKHAGGDPNVGW 340 (442)
T ss_pred hhcccCC------------CCHHHHHHCCCeEEEcCCCCCcc---------HHH------HHHHHHHHhccccCCCCCCH
Confidence 2222222 22889999999999999964321 122 3344443433211 112347
Q ss_pred HHHHHHHhHHHHHHcC--CCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEE
Q 009410 410 TDYVRLTSTECARIFN--VYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 487 (535)
Q Consensus 410 ~eal~~~T~~~A~~lg--l~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~ 487 (535)
+++++++|.+||+++| ++++.|+|++||+||||++|.+.+..++..++.+ ...|.+. ..+|+.||++||+|++
T Consensus 341 ~~~~~~aT~~gA~~lg~~~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~---~~v~~~~--~~~v~~v~v~G~~v~~ 415 (442)
T PRK07203 341 PESPAMLFENNNKIAERYFGAKFGILEEGAKADLIIVDYNPPTPLNEDNING---HILFGMN--GGSVDTTIVNGKVVME 415 (442)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccCEEEEcCCCCeecCcccccc---ceEeecC--CCceEEEEECCEEEEE
Confidence 8999999999999999 4567899999999999999988765543222211 2222221 3589999999999999
Q ss_pred CCeecccC
Q 009410 488 NDELNVVP 495 (535)
Q Consensus 488 ~~~~~~~~ 495 (535)
+|+++..+
T Consensus 416 ~g~~~~~d 423 (442)
T PRK07203 416 DRKFLNFD 423 (442)
T ss_pred CCcccccC
Confidence 99998876
No 41
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=100.00 E-value=4.4e-36 Score=301.80 Aligned_cols=358 Identities=19% Similarity=0.210 Sum_probs=246.6
Q ss_pred ccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccc-c---ccCCC--Cchhh
Q 009410 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLA-M---EFMGS--ETIDD 126 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~-~---~~~g~--~~~~~ 126 (535)
++++|+|++|++.+....++|+|+||+|++|++... ...++||++|++|+|||||+|+|.. . +..+. ...+.
T Consensus 2 ~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~--~~~~~iDa~g~~v~PG~ID~H~h~~~~~~~p~~~~~~~~~~~ 79 (383)
T PRK15446 2 MEMILSNARLVLPDEVVDGSLLIEDGRIAAIDPGAS--ALPGAIDAEGDYLLPGLVDLHTDNLEKHLAPRPGVDWPADAA 79 (383)
T ss_pred ccEEEECcEEEcCCCceeeeEEEECCEEEEecCCCC--CCCceEeCCCCEEEeCeEEcccCCcccccCCCCCCccchHHH
Confidence 469999999998776668999999999999998543 2457899999999999999999544 2 21111 22277
Q ss_pred hHHHHHHHHhCCcEEEeccccCC--C------CChH-HHHHHHH--HHhcccccccceeeeeecCChhhHHHHHHHHHHc
Q 009410 127 FFSGQAAALAGGTTMHIDFVIPI--N------GSLT-AGFEAYE--KKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEK 195 (535)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~--~------~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (535)
+....++++++||||++|+.... . .... ...+... ...++..+++++|......+.+..+++..+. +.
T Consensus 80 ~~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD~~~h~~~~~~~~~~~~~l~~~~-~~ 158 (383)
T PRK15446 80 LAAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARARGLLRADHRLHLRCELTNPDALELFEALL-AH 158 (383)
T ss_pred HHHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhcCchhccceeEEEEEecCcchHHHHHHHh-cC
Confidence 88889999999999999974222 1 1122 1223333 2235678899999999877777788888887 77
Q ss_pred CCCEEEEEeecC-CC-CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHH
Q 009410 196 GINSFKFFMAYK-GS-FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (535)
Q Consensus 196 g~~~ik~~~~~~-~~-~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 273 (535)
|...+|.|++.. +. .....+.+.+.. +.+.| ..|++.......... .|...+.+.+.
T Consensus 159 g~~~~k~fm~~~p~~~~~~~~~~~~~~~--~~~~g---~~~~e~~~~~~~~~~----------------~~~~~~~e~i~ 217 (383)
T PRK15446 159 PRVDLVSLMDHTPGQRQFRDLEKYREYY--AGKYG---LSDEEFDAFVEERIA----------------LSARYAPPNRR 217 (383)
T ss_pred CCcCEEEEeCCCCccccccCHHHHHHHH--HhhcC---CCHHHHHHHHHHHHH----------------hHhhcCHHHHH
Confidence 999999998754 32 223445555555 34666 567776544332211 24455568899
Q ss_pred HHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEE-cC-CCCC--cccH
Q 009410 274 RAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM-SP-PIRA--SGHN 349 (535)
Q Consensus 274 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p-~~r~--~~~~ 349 (535)
++++.++..|.++ ..|..... +.++.+++.|+.++-.+. +.+.... -...+..... .| +.|. ....
T Consensus 218 ~~v~~A~~~g~~v-~sH~~~~~--~~i~~a~~~Gv~~~e~~~------~~e~~~~-~~~~g~~v~~~~p~~~r~~~~~~~ 287 (383)
T PRK15446 218 AIAALARARGIPL-ASHDDDTP--EHVAEAHALGVAIAEFPT------TLEAARA-ARALGMSVLMGAPNVVRGGSHSGN 287 (383)
T ss_pred HHHHHHHHCCCce-eecCCCCH--HHHHHHHHcCCceeeCCC------cHHHHHH-HHHCCCEEEeCCcccccCCcccch
Confidence 9999999999997 77884222 557778888887763211 1111100 0001111111 12 2333 3456
Q ss_pred HHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCC
Q 009410 350 KALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPR 429 (535)
Q Consensus 350 ~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~ 429 (535)
..+++++++|+++++|||+.|... +...+ .+....+++++++++++|.|||+++|+++
T Consensus 288 ~~~~~~~~~Gv~~~lgSD~~p~~~--------------------~~~~~-~~~~~~gls~~~al~~~T~npA~~lgl~~- 345 (383)
T PRK15446 288 VSALDLAAAGLLDILSSDYYPASL--------------------LDAAF-RLADDGGLDLPQAVALVTANPARAAGLDD- 345 (383)
T ss_pred HhHHHHHHCCCcEEEEcCCChhhH--------------------HHHHH-HHHHhcCCCHHHHHHHHhHHHHHHcCCCC-
Confidence 788999999999999999865311 11112 22335679999999999999999999954
Q ss_pred CccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC
Q 009410 430 KGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 430 ~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~ 488 (535)
.|+|++|+.|||+|+|.++. ...+..||++|++||+.
T Consensus 346 ~G~I~~G~~ADlvv~d~~~~----------------------~~~v~~v~~~G~~v~~~ 382 (383)
T PRK15446 346 RGEIAPGKRADLVRVRRAGG----------------------LPVVRAVWRGGRRVFLA 382 (383)
T ss_pred CcCcCCCCcCCEEEEcCCCC----------------------CcchheEEECCEEEEeC
Confidence 49999999999999997621 13688999999999875
No 42
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=100.00 E-value=5.9e-36 Score=307.72 Aligned_cols=375 Identities=22% Similarity=0.266 Sum_probs=249.7
Q ss_pred EEEEccEEEcCCC----ceeeeEEEeCCEEEEeeCCCCC---CCCceEEecCCCEEeecccccccccccccC-CC-----
Q 009410 55 ILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS----- 121 (535)
Q Consensus 55 ~vi~n~~vi~~~~----~~~~~I~I~~G~I~~Vg~~~~~---~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~----- 121 (535)
++|+|++|++++. .++++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+.+... |.
T Consensus 1 ~li~~~~i~t~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~~~id~~g~~v~PG~vd~H~H~~~~~~rg~~~d~~ 80 (441)
T TIGR03314 1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKYPEATFIDAKGKLIMPGFINTHNHFYSTFARGMMADIP 80 (441)
T ss_pred CEEECCEEEecCCCCceEeccEEEEECCEEEEEcCchhhcccCCCCeEEeCCCCEEecCeeecccchhhhhhccccccCC
Confidence 3789999997543 2578999999999999975321 135689999999999999999999976521 10
Q ss_pred -------------------CchhhhHH----HHHHHHhCCcEEEeccccCCC---CChHHHHHHHHHHhcccccccceee
Q 009410 122 -------------------ETIDDFFS----GQAAALAGGTTMHIDFVIPIN---GSLTAGFEAYEKKAKNSCMDYGFHM 175 (535)
Q Consensus 122 -------------------~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (535)
.++++.+. +..+++++||||++|+..... .......+...+.+-+..+.+.+..
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~ 160 (441)
T TIGR03314 81 PPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHASPNAITGSLSTIRKAADEAGLRTMLCYETSD 160 (441)
T ss_pred CCCCHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccccccccchHHHHHHHHHHhCCeEEEeeeeec
Confidence 11122221 223458999999999854322 1233445556666655544433322
Q ss_pred eee-cCChhhHHHHHHHHH-HcC--CCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC-hhhHHHHHHHHHH
Q 009410 176 AIT-KWDEVVSDEMEVMVK-EKG--INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GDAVFEGQKRMIE 250 (535)
Q Consensus 176 ~~~-~~~~~~~~~~~~~~~-~~g--~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~-~~~~~~~~~~~~~ 250 (535)
... ....+..++..++.+ ..+ ...++..+.++..+.++++.++++.+.|+++++++++|+.+ ..+.....+ .
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~i~~H~~E~~~e~~~~~~---~ 237 (441)
T TIGR03314 161 RDGGKEMQEGVEENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIYDVEDSHH---K 237 (441)
T ss_pred CCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHH---H
Confidence 110 111122222222221 122 23577777888888899999999999999999999999954 333332222 2
Q ss_pred cCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcC
Q 009410 251 LGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (535)
Q Consensus 251 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (535)
.|... ++.+ +-....+.++.+.|+...+. ++++.+++.|+.|+.||.+ |
T Consensus 238 ~g~~~----------------~~~l-~~~G~l~~~~~~~H~~~~~~-~d~~~la~~g~~v~~cP~s-------------n 286 (441)
T TIGR03314 238 YGKDI----------------VERL-ADFGLLGSKTLAAHCIYLSD-REIELLNETDTFVVHNPES-------------N 286 (441)
T ss_pred cCCCH----------------HHHH-HHCCCCCCCeEEEEEecCCH-HHHHHHHHcCCcEEECHHH-------------H
Confidence 23211 2222 22335577889999999887 8999999999999999975 3
Q ss_pred ccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhc-CCCCH
Q 009410 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVES-GQISV 409 (535)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~-~~ls~ 409 (535)
+..+.+. +| +.+++++|+++++|||+...+ .|. ++++...+++.... ....+
T Consensus 287 ~~l~~G~---~p---------~~~~~~~Gv~v~LGtD~~~~d---------~~~------em~~a~~~~~~~~~~~~~~~ 339 (441)
T TIGR03314 287 MGNAVGY---NP---------VLRMFKNGILLGLGTDGYTSD---------MFE------SLKFANFKHKDAGGDLNAAW 339 (441)
T ss_pred hhhccCC---CC---------HHHHHHCCCEEEEcCCCCCcC---------HHH------HHHHHHHHhccccCCCCccH
Confidence 3333322 22 888999999999999975321 222 44555444433221 11235
Q ss_pred HHHHHHHhHHHHHHcC--CCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEE
Q 009410 410 TDYVRLTSTECARIFN--VYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 487 (535)
Q Consensus 410 ~eal~~~T~~~A~~lg--l~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~ 487 (535)
.++++++|.++|+++| +..+.|+|++||+|||+++|.+.++.++.+++.+. ++.+.. .++|..||++|++|++
T Consensus 340 ~~~~~~aT~~ga~al~~~l~~~~G~Le~G~~ADlvv~d~~~~~~~~~~~~~~~----lv~~~~-~~~V~~v~V~G~~v~~ 414 (441)
T TIGR03314 340 PESPAMLFENNNEIAERNFGAKFGRLEPGAKADLIIVDYNAPTPLTADNINGH----ILFGMN-GGSVDSTMVNGKVVME 414 (441)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccEEEEcCCCCeeechhhcccc----ceecCC-CCeeEEEEECCEEEEE
Confidence 7899999999999996 44578999999999999999988877664443332 222221 4699999999999999
Q ss_pred CCeecccC
Q 009410 488 NDELNVVP 495 (535)
Q Consensus 488 ~~~~~~~~ 495 (535)
+++++..+
T Consensus 415 ~~~~~~~d 422 (441)
T TIGR03314 415 DREFLHFD 422 (441)
T ss_pred CCcccccC
Confidence 99998876
No 43
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.7e-35 Score=303.66 Aligned_cols=373 Identities=22% Similarity=0.281 Sum_probs=243.2
Q ss_pred cEEEEccEEEcCCCc--eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-C----------
Q 009410 54 KILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G---------- 120 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~--~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g---------- 120 (535)
+++|+|++|++++.. .+++|+|+||+|++|+++...+ +.++||+.|++|+|||||+|+|+++... |
T Consensus 2 ~~~i~~~~i~~~~~~~~~~~~i~i~~g~I~~v~~~~~~~-~~~~id~~~~~v~Pg~vd~H~H~~~~~~rg~~~~~~l~~~ 80 (424)
T PRK08393 2 SILIKNGYVIYGENLKVIRADVLIEGNKIVEVKRNINKP-ADTVIDASGSVVSPGFINAHTHSPMVLLRGLADDVPLMEW 80 (424)
T ss_pred eEEEECcEEEeCCCCceecceEEEECCEEEEecCCCCCC-CCeEEeCCCCEEccCeeeeccCcchHhhhhccCCCCHHHH
Confidence 489999999998763 5789999999999999864433 4679999999999999999999876411 0
Q ss_pred ----------CCchhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee-ecCChhhH
Q 009410 121 ----------SETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEVVS 185 (535)
Q Consensus 121 ----------~~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 185 (535)
..++++++ .....++++||||+.|+... ....++.....+.+....++..... .....+..
T Consensus 81 l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~----~~~~~~a~~~~G~r~~~~~~~~~~~~~~~~~~~l 156 (424)
T PRK08393 81 LQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMYFH----MEEVAKATLEVGLRGYLSYGMVDLGDEEKREKEI 156 (424)
T ss_pred HHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEeccccC----HHHHHHHHHHhCCeEEEeceEecCCCccchHHHH
Confidence 01222322 23345689999999998532 2344444445554544433221100 00111112
Q ss_pred HHHHHHHH---HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC-hhhHHHHHHHHHHcCCCCcccccc
Q 009410 186 DEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 186 ~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
++..+..+ ..+...+...+.++....++++.++++++.|+++|+++.+|+.. ........+ ..|...
T Consensus 157 ~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~---~~g~~~------ 227 (424)
T PRK08393 157 KETEKLMEFIEKLNSPRVHFVFGPHAPYTCSLALLKWVREKAREWNKLITIHLSETMDEIKQIRE---KYGKSP------ 227 (424)
T ss_pred HHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HhCcCH------
Confidence 22222221 12333455555666667789999999999999999999999943 333222222 122211
Q ss_pred cCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcC
Q 009410 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 341 (535)
+ +.+......+.++.+.|+...+. ++++++++.|+.+++||..+ +..+...
T Consensus 228 ----------~-~~l~~~G~l~~~~~~~H~~~l~~-~~l~~la~~g~~v~~~P~sn-------------~~lg~g~---- 278 (424)
T PRK08393 228 ----------V-VLLDEIGFLNEDVIAAHGVWLSS-RDIRILASAGVTVAHNPASN-------------MKLGSGV---- 278 (424)
T ss_pred ----------H-HHHHHcCCCCCCcEEEEeecCCH-HHHHHHHhcCCEEEECHHHH-------------HhhccCC----
Confidence 1 11222234466778899988776 88999999999999998642 1111111
Q ss_pred CCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh--cCCCCHHHHHHHHhHH
Q 009410 342 PIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE--SGQISVTDYVRLTSTE 419 (535)
Q Consensus 342 ~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~--~~~ls~~eal~~~T~~ 419 (535)
.++.+++++|+++++|||+.......+ ++. ++.+....++... ...++++++++++|.|
T Consensus 279 --------~~~~~~~~~Gv~v~lGtD~~~~~~~~d-----~~~------~~~~a~~~~~~~~~~~~~~~~~~al~~aT~~ 339 (424)
T PRK08393 279 --------MPLRKLLNAGVNVALGTDGAASNNNLD-----MLR------EMKLAALLHKVHNLDPTIADAETVFRMATQN 339 (424)
T ss_pred --------CCHHHHHHCCCcEEEecCCCccCCchh-----HHH------HHHHHHHHHhhccCCCCcCCHHHHHHHHHHH
Confidence 238899999999999999654222111 111 2233323322221 1236789999999999
Q ss_pred HHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccC
Q 009410 420 CARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 420 ~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
||+++|++ .|+|++||+||||++|.+.+...+..++.+...+.++ .++|..||++|++||++|+++..+
T Consensus 340 ~A~~lg~~--~G~l~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~v~G~~v~~~g~~~~~d 408 (424)
T PRK08393 340 GAKALGLK--AGVIKEGYLADIAVIDFNRPHLRPINNPISHLVYSAN-----GNDVETTIVDGKIVMLDGEVLTLD 408 (424)
T ss_pred HHHHhCCC--CCccCCCCccCEEEEeCCCCCcCCCCChHHHeeeeCC-----CCCeeEEEECCEEEEECCeECCCC
Confidence 99999994 5999999999999999987766654444443333332 358999999999999999987754
No 44
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.4e-35 Score=308.81 Aligned_cols=372 Identities=19% Similarity=0.173 Sum_probs=237.0
Q ss_pred cEEEEccEEEcCCC-----ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccc-----cC----
Q 009410 54 KILIKGGTVVNAHH-----QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME-----FM---- 119 (535)
Q Consensus 54 ~~vi~n~~vi~~~~-----~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~-----~~---- 119 (535)
.++|+|+.|++.++ .++++|+|+||+|++|++.... .+.++||++|++|+|||||+|+|+... ..
T Consensus 2 ~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~~-~~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~~~~~~~~ 80 (488)
T PRK06151 2 RTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFDG-EVDRVIDAGNALVGPGFIDLDALSDLDTTILGLDNGPG 80 (488)
T ss_pred eEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCCC-CCCeEEeCCCCEEecCEEeeecccchhhhhcccccchh
Confidence 47899999976543 2578999999999999985432 246899999999999999999996421 00
Q ss_pred ---C--------------CCchhhhH----HHHHHHHhCCcEEEeccccCCC---C----ChHHHHHHHHHHhccccccc
Q 009410 120 ---G--------------SETIDDFF----SGQAAALAGGTTMHIDFVIPIN---G----SLTAGFEAYEKKAKNSCMDY 171 (535)
Q Consensus 120 ---g--------------~~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~---~----~~~~~~~~~~~~~~~~~~~~ 171 (535)
+ ..++++.+ ..+.+++++||||++|+..... . .....++.....+.+..+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~ 160 (488)
T PRK06151 81 WAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRLGLRVYLGP 160 (488)
T ss_pred HHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHcCCeEEecc
Confidence 0 01222222 2345578999999998743211 1 13344445555554432221
Q ss_pred ceeee-----e-----e-cC---ChhhHHHHHHHHH---HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEE
Q 009410 172 GFHMA-----I-----T-KW---DEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (535)
Q Consensus 172 ~~~~~-----~-----~-~~---~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (535)
.+... . . .. ..+...+...+.+ ..|.+.+|....++....++++.+.++++.|+++|+++.+|
T Consensus 161 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~v~~H 240 (488)
T PRK06151 161 AYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRTAAAARELGCPVRLH 240 (488)
T ss_pred hhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceEEEEcCCCCCCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 11100 0 0 00 0111222222221 34667888887777777789999999999999999999999
Q ss_pred cC-ChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHH--------HHHHHHHH
Q 009410 235 AE-NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAM--------EEIAKARK 305 (535)
Q Consensus 235 ~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~--------~~~~~~~~ 305 (535)
+. +........+ ..|... ++.+.+ ....+.++.+.|+...+.. ++++++++
T Consensus 241 ~~e~~~~~~~~~~---~~g~~~----------------~~~~~~-~g~l~~r~~l~H~~~l~~~~~~~~~~~~~~~~la~ 300 (488)
T PRK06151 241 CAQGVLEVETVRR---LHGTTP----------------LEWLAD-VGLLGPRLLIPHATYISGSPRLNYSGGDDLALLAE 300 (488)
T ss_pred ECCchHHHHHHHH---HcCCCH----------------HHHHHH-cCCCCCCcEEEEEEEcCCccccccCCHHHHHHHHh
Confidence 94 4433222221 122211 111111 2233567788898876531 67888999
Q ss_pred cCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCccc
Q 009410 306 AGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRK 385 (535)
Q Consensus 306 ~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~ 385 (535)
.|+.+++||... ...+.. ..++.+++++|+++++|||+.+.+ +|.
T Consensus 301 ~g~~v~~~P~~~-------------~~~g~~------------~~p~~~l~~~Gv~v~lGtD~~~~~---------~~~- 345 (488)
T PRK06151 301 HGVSIVHCPLVS-------------ARHGSA------------LNSFDRYREAGINLALGTDTFPPD---------MVM- 345 (488)
T ss_pred cCCEEEECchhh-------------hhhccc------------cccHHHHHHCCCcEEEECCCCCcc---------HHH-
Confidence 999999887531 111111 133889999999999999964321 122
Q ss_pred CcchHHHHHHHHHHHHHh--cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCC
Q 009410 386 IPNGIEERMHLVWDTMVE--SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDT 463 (535)
Q Consensus 386 ~~~g~~~~l~~~~~~~~~--~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~ 463 (535)
.+.......++.. ...++++++|+++|.|||+++|+++ +|+|++||.|||||+|.+.+...+. +
T Consensus 346 -----~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~-~G~I~~G~~ADlvvld~~~~~~~~~--------~ 411 (488)
T PRK06151 346 -----NMRVGLILGRVVEGDLDAASAADLFDAATLGGARALGRDD-LGRLAPGAKADIVVFDLDGLHMGPV--------F 411 (488)
T ss_pred -----HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhCCCC-CcccCCCCcCCEEEEeCCccccCCc--------c
Confidence 1222222222322 1248999999999999999999965 8999999999999999775432221 1
Q ss_pred CCCCCeeE---eeEEEEEEECCEEEEECCeecccC
Q 009410 464 NVYEGRRV---KGKVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 464 ~p~~~~~~---~~~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
.|+.+... ..+|+.||++|++||++|+++..+
T Consensus 412 d~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d 446 (488)
T PRK06151 412 DPIRTLVTGGSGRDVRAVFVDGRVVMEDGRLPGVD 446 (488)
T ss_pred CHHHHHHhhCCCCCccEEEECCEEEEECCeecCCC
Confidence 12222111 247999999999999999999876
No 45
>PRK09228 guanine deaminase; Provisional
Probab=100.00 E-value=1.8e-35 Score=303.05 Aligned_cols=361 Identities=19% Similarity=0.168 Sum_probs=228.0
Q ss_pred eeeeEEEeCCEEEEeeCCCCC----CCCceEEecCCCEEeecccccccccccccC-CC--------------------Cc
Q 009410 69 QIADVYVEDGIVVAVQPNINV----GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--------------------ET 123 (535)
Q Consensus 69 ~~~~I~I~~G~I~~Vg~~~~~----~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~--------------------~~ 123 (535)
++++|+|+||+|++||+.... +.+.++||++|++|+|||||+|+|+++... +. .+
T Consensus 30 ~~g~I~I~~g~I~~Vg~~~~~~~~~~~~~~viD~~g~lv~PGlVn~H~H~~~~~~~g~~~~~l~~wl~~~~~~~e~~~~~ 109 (433)
T PRK09228 30 EDGLLLVEDGRIVAAGPYAELRAQLPADAEVTDYRGKLILPGFIDTHIHYPQTDMIASYGEQLLDWLNTYTFPEERRFAD 109 (433)
T ss_pred CCeEEEEECCEEEEEcChHHhhhhcCCCCeEEeCCCCEEecceecccccccchhhccCCchHHHHHHHhhhhHHHHHhCC
Confidence 488999999999999985332 223689999999999999999999876521 10 01
Q ss_pred hhhhHH----HHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeee-ee----cCChhhHHHHHHHHHH
Q 009410 124 IDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA-IT----KWDEVVSDEMEVMVKE 194 (535)
Q Consensus 124 ~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~ 194 (535)
++..+. +..+++++||||+.|+............+...+.+.+..+..++... .. ....+..+...++.++
T Consensus 110 ~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 189 (433)
T PRK09228 110 PAYAREVAEFFLDELLRNGTTTALVFGTVHPQSVDALFEAAEARNMRMIAGKVLMDRNAPDGLRDTAESGYDDSKALIER 189 (433)
T ss_pred HHHHHHHHHHHHHHHHhCCceEEEeccccCHHHHHHHHHHHHHcCCeEEeeeeeecCCCCcccccCHHHHHHHHHHHHHH
Confidence 111111 23446899999999875432222333444444444444333322211 00 1111222222233222
Q ss_pred -cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc-CCeEEEEcC-ChhhHHHHHHHHHHcCCCCcccccccCChhhHHHH
Q 009410 195 -KGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAE-NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (535)
Q Consensus 195 -~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (535)
.+...+++.+.++..+.++++.++++.+.|+++ ++++++|.. +........+ ..|.. + .
T Consensus 190 ~~~~~~~~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~~i~~Hl~E~~~e~~~~~~---~~g~~---------~------~ 251 (433)
T PRK09228 190 WHGKGRLLYAITPRFAPTSTPEQLEAAGALAREHPDVWIQTHLSENLDEIAWVKE---LFPEA---------R------D 251 (433)
T ss_pred HhCCCCceEEEECCcCCcCCHHHHHHHHHHHHHCCCCceEEeecCChhHHHHHHH---HcCCC---------C------C
Confidence 233346666677777788999999999999998 999999994 4433322221 11211 0 0
Q ss_pred HHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHH
Q 009410 272 TTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (535)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~ 351 (535)
..+.++-....+.++.+.|+...++ ++++++++.|+.++.||..+ +..+... .+
T Consensus 252 ~~~~l~~~G~l~~~~~~~H~~~l~~-~~~~~la~~g~~v~~~P~sn-------------~~lg~g~------------~~ 305 (433)
T PRK09228 252 YLDVYERYGLLGPRAVFAHCIHLED-RERRRLAETGAAIAFCPTSN-------------LFLGSGL------------FD 305 (433)
T ss_pred HHHHHHHcCCCCCCeEEEeccCCCH-HHHHHHHHcCCeEEECCccH-------------HhhcCCC------------cC
Confidence 1111222234467889999999887 88999999999999998752 1111111 23
Q ss_pred HHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCc
Q 009410 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKG 431 (535)
Q Consensus 352 ~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~G 431 (535)
+.+++++|+++++|||....+.. + +|. ++++....+++ ...+++++++|+++|.+||+++|+++++|
T Consensus 306 ~~~~~~~Gv~v~lGtD~~~~~~~-d-----~~~------~~~~~~~~~~~-~~~~~~~~~~l~~aT~~~A~~lg~~~~~G 372 (433)
T PRK09228 306 LKRADAAGVRVGLGTDVGGGTSF-S-----MLQ------TMNEAYKVQQL-QGYRLSPFQAFYLATLGGARALGLDDRIG 372 (433)
T ss_pred HHHHHHCCCeEEEecCCCCCCCC-C-----HHH------HHHHHHHHhhc-ccCCCCHHHHHHHHhHHHHHHhCCCCCCc
Confidence 88899999999999996432111 1 111 22333333222 23458999999999999999999987899
Q ss_pred cccCCCCccEEEEcCCCceeeec-----CCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC
Q 009410 432 AILVGSDADIIIFNPNSSFEITA-----RSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 432 sI~~Gk~ADlvvld~~~~~~i~~-----~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~ 488 (535)
+|++||+||||++|.++.+...+ ..+.++.....|.+. .++|+.|||+|++|+++
T Consensus 373 ~l~~Gk~ADlvv~d~~~~~~~~~~~~~~~~~~d~~~~lv~~~~--~~~V~~v~VdG~~v~~~ 432 (433)
T PRK09228 373 NLAPGKEADFVVLDPAATPLLALRTARAESLEELLFALMTLGD--DRAVAETYVAGRPVYRR 432 (433)
T ss_pred ccCCCCCCCEEEEcCCCCccccchhcccCCHHHHHHHHhhcCC--ccceeEEEECCEEeccC
Confidence 99999999999999876433221 011222233344433 46899999999999875
No 46
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=6.6e-35 Score=299.51 Aligned_cols=374 Identities=23% Similarity=0.324 Sum_probs=241.5
Q ss_pred cEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-C----------
Q 009410 54 KILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G---------- 120 (535)
Q Consensus 54 ~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g---------- 120 (535)
+++|+|++|+++++ ..+++|+|+||+|++|++.... .+.++||+.|++|+|||||+|+|+.+... +
T Consensus 3 ~~~~~~~~i~~~~~~~~~~~~v~v~~g~I~~i~~~~~~-~~~~~id~~g~~v~PG~vd~H~H~~~~~~~g~~~~~~~~~~ 81 (430)
T PRK06038 3 DIIIKNAYVLTMDAGDLKKGSVVIEDGTITEVSESTPG-DADTVIDAKGSVVMPGLVNTHTHAAMTLFRGYADDLPLAEW 81 (430)
T ss_pred CEEEEccEEEECCCCeeeccEEEEECCEEEEecCCCCC-CCCEEEeCCCCEEecCeeecccCcchhhhhhccCCCCHHHH
Confidence 58999999997653 3578999999999999986432 34689999999999999999999986521 1
Q ss_pred ----------CCchhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee-ecCChhhH
Q 009410 121 ----------SETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEVVS 185 (535)
Q Consensus 121 ----------~~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 185 (535)
..++++.+ .....++++||||++|+... .....+...+.+.+....++..... .....+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~----~~~~~~a~~~~GiR~~~~~~~~d~~~~~~~~~~l 157 (430)
T PRK06038 82 LNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMYFY----MDEVAKAVEESGLRAALSYGMIDLGDDEKGEAEL 157 (430)
T ss_pred HHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEccccC----HHHHHHHHHHhCCeEEEEchhccCCCccchHHHH
Confidence 01122221 22345688999999998531 2233444444444433222211100 00111222
Q ss_pred HHHHHHHHH-c--CCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009410 186 DEMEVMVKE-K--GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 186 ~~~~~~~~~-~--g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
++...+++. . ....++..+.++....++++.++++++.|+++|+++.+|+.+.......... ..|...
T Consensus 158 ~~~~~~i~~~~~~~~g~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~--~~G~~~------- 228 (430)
T PRK06038 158 KEGKRFVKEWHGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLETEAELNQMKE--QYGMCS------- 228 (430)
T ss_pred HHHHHHHHHhcCCCCCceEEEEeCCcCccCCHHHHHHHHHHHHHcCCcEEEEcCCCHHHHHHHHH--HhCCCH-------
Confidence 223333322 1 1235666667777778899999999999999999999999665432222211 122211
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCC
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPP 342 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 342 (535)
++. ++-....+.++.+.|+...++ ++++++++.|+.++.||..+ +..+...
T Consensus 229 ---------i~~-l~~~g~l~~r~~~~H~~~l~~-~~~~~la~~g~~v~~~P~~n-------------~~~~~~~----- 279 (430)
T PRK06038 229 ---------VNY-LDDIGFLGPDVLAAHCVWLSD-GDIEILRERGVNVSHNPVSN-------------MKLASGI----- 279 (430)
T ss_pred ---------HHH-HHHcCCCCCCeEEEEEecCCH-HHHHHHHhcCCEEEEChHHh-------------hhhccCC-----
Confidence 111 122233467788899998887 78999999999999988642 1111111
Q ss_pred CCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHH--hcCCCCHHHHHHHHhHHH
Q 009410 343 IRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMV--ESGQISVTDYVRLTSTEC 420 (535)
Q Consensus 343 ~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~--~~~~ls~~eal~~~T~~~ 420 (535)
.++++++++|+++++|||+.......+ +|. ++.+........ ...+++++++|+++|.||
T Consensus 280 -------~p~~~~~~~Gv~v~lGtD~~~~~~~~d-----~~~------~~~~a~~~~~~~~~~~~~~~~~~al~~aT~~g 341 (430)
T PRK06038 280 -------APVPKLLERGVNVSLGTDGCASNNNLD-----MFE------EMKTAALLHKVNTMDPTALPARQVLEMATVNG 341 (430)
T ss_pred -------CCHHHHHHCCCeEEEeCCCCccCCCcC-----HHH------HHHHHHHHhhhccCCCCcCCHHHHHHHHhHHH
Confidence 238999999999999999643221111 122 222222222221 134689999999999999
Q ss_pred HHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccC
Q 009410 421 ARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 421 A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
|+++|++ .|+|++||.||||++|.+.+...+..++. ...+|.+. ..+|+.||++|+++|++|+++..+
T Consensus 342 A~~lg~~--~G~l~~G~~ADlvvld~~~~~~~p~~~~~---~~~v~~~~--~~~v~~v~v~G~~v~~~g~~~~~d 409 (430)
T PRK06038 342 AKALGIN--TGMLKEGYLADIIIVDMNKPHLTPVRDVP---SHLVYSAS--GSDVDTTIVDGRILMEDYKVLCMD 409 (430)
T ss_pred HHHhCCC--CCccCCCcccCEEEEeCCCCccCCCCChH---HheeEeCC--CCceeEEEECCEEEEECCeECCCC
Confidence 9999994 59999999999999998865433321111 11222221 247999999999999999998876
No 47
>PRK12393 amidohydrolase; Provisional
Probab=100.00 E-value=1.4e-34 Score=298.98 Aligned_cols=379 Identities=20% Similarity=0.221 Sum_probs=243.0
Q ss_pred ccEEEEccE-EEcCCC----cee-eeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-CC----
Q 009410 53 SKILIKGGT-VVNAHH----QQI-ADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS---- 121 (535)
Q Consensus 53 ~~~vi~n~~-vi~~~~----~~~-~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~---- 121 (535)
.+++|+|++ |++.+. ..+ ++|+|+||+|++|++. ...++.++||++|++|+|||||+|+|+++.+. |.
T Consensus 2 ~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~~-~~~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~rg~~~~~ 80 (457)
T PRK12393 2 PSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGAL-TPLPGERVIDATDCVVYPGWVNTHHHLFQSLLKGVPAGI 80 (457)
T ss_pred CcEEEECCeEEEecCCCccccccCceEEEECCEEEEEecc-CCCCCCeEEeCCCCEEecCEeecccCccccccccccccc
Confidence 468999996 677553 234 4899999999999983 32346899999999999999999999997631 11
Q ss_pred ------------------CchhhhH----HHHHHHHhCCcEEEeccccC---CC--CChHHHHHHHHHHhccccccccee
Q 009410 122 ------------------ETIDDFF----SGQAAALAGGTTMHIDFVIP---IN--GSLTAGFEAYEKKAKNSCMDYGFH 174 (535)
Q Consensus 122 ------------------~~~~~~~----~~~~~~l~~GvTtv~d~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~ 174 (535)
.+++..+ .+..+++++||||++|+... .. ......++...+.+.+..+.++..
T Consensus 81 ~~~~~~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~ 160 (457)
T PRK12393 81 NQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFVLCRGGA 160 (457)
T ss_pred CCchHHHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhcccccccchHHHHHHHHHHcCCeEEEEcccc
Confidence 1111211 23345689999999998522 11 123445566666666644332221
Q ss_pred e-------eeec-C----ChhhHHHHHHHHHH-cC-C--CEEEEEeecCCC-CcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 175 M-------AITK-W----DEVVSDEMEVMVKE-KG-I--NSFKFFMAYKGS-FMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 175 ~-------~~~~-~----~~~~~~~~~~~~~~-~g-~--~~ik~~~~~~~~-~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
. .... . ..+..+....+.+. .+ . ..+++.+.++.. ..++++.++++++.|+++|+++.+|+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~g~~~~~H~~e 240 (457)
T PRK12393 161 TQTRGDHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLRRVVVAPTTPTFSLPPELLREVARAARGMGLRLHSHLSE 240 (457)
T ss_pred ccccccCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCceEEEEcCCCCCCCcCHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 1 0000 0 11223333333321 11 1 124555555555 6788999999999999999999999954
Q ss_pred h-hhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEecccc
Q 009410 238 G-DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (535)
Q Consensus 238 ~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~ 316 (535)
. ..+.... ...|... ++.+ +-....+.++.+.|+...++ ++++++++.|+.++.||..
T Consensus 241 ~~~~~~~~~---~~~g~~~----------------~~~l-~~~g~l~~~~~~~H~~~l~~-~d~~~la~~g~~v~~~P~s 299 (457)
T PRK12393 241 TVDYVDFCR---EKYGMTP----------------VQFV-AEHDWLGPDVWFAHLVKLDA-EEIALLAQTGTGIAHCPQS 299 (457)
T ss_pred CHHHHHHHH---HHhCCCH----------------HHHH-HHcCCCCCCeEEEEEecCCH-HHHHHHHHcCCeEEECchh
Confidence 3 2222222 1222211 1111 22233466788999999887 8999999999999999865
Q ss_pred ceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHH
Q 009410 317 SGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHL 396 (535)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~ 396 (535)
+ +..+... .++++++++|+++++|||+...+...+ +|. ++.+..
T Consensus 300 n-------------~~lg~g~------------~~~~~~~~~Gv~v~lGtD~~~~~~~~d-----~~~------~~~~a~ 343 (457)
T PRK12393 300 N-------------GRLGSGI------------APALAMEAAGVPVSLGVDGAASNESAD-----MLS------EAHAAW 343 (457)
T ss_pred h-------------hhhcccC------------CCHHHHHHCCCeEEEecCCcccCCCcc-----HHH------HHHHHH
Confidence 2 2222211 228899999999999999754321111 222 222222
Q ss_pred HHHHHH-hcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEE
Q 009410 397 VWDTMV-ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKV 475 (535)
Q Consensus 397 ~~~~~~-~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v 475 (535)
..+... ....++++++++++|.+||+++|++ ++|+|++||.|||+|+|.+.+...+..++. ++++.... ..+|
T Consensus 344 ~~~~~~~~~~~~~~~~~l~~~T~~~A~~l~~~-~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~----~~~~~~~~-~~~v 417 (457)
T PRK12393 344 LLHRAEGGADATTVEDVVHWGTAGGARVLGLD-AIGTLAVGQAADLAIYDLDDPRFFGLHDPA----IAPVACGG-PAPV 417 (457)
T ss_pred HHhhhcCCCCCCCHHHHHHHHhHHHHHHhCCC-CCCCcCCCCcCCEEEEeCCCcccCCCCCch----hhhhccCC-CCCe
Confidence 222110 1234899999999999999999995 489999999999999999877655432211 22333211 4689
Q ss_pred EEEEECCEEEEECCeecccC
Q 009410 476 EVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 476 ~~v~~~Gr~V~~~~~~~~~~ 495 (535)
..||++|++||++|+++..+
T Consensus 418 ~~v~v~G~~v~~~~~~~~~d 437 (457)
T PRK12393 418 KALLVNGRPVVENGAIPGLD 437 (457)
T ss_pred eEEEECCEEEEECCccCCCC
Confidence 99999999999999988765
No 48
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=100.00 E-value=3.1e-35 Score=299.75 Aligned_cols=369 Identities=20% Similarity=0.258 Sum_probs=242.2
Q ss_pred CcccEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCC----CCCceEEecCCCEEeecccccccccccccC-----
Q 009410 51 SSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV----GDDVKVLDATGKFVMPGGIDPHTHLAMEFM----- 119 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~----~~~~~vID~~G~~vlPGlID~H~H~~~~~~----- 119 (535)
|..+++|+||+|+|++. .....|.|+||||++||++... .+.+++||++|++|+|||||+|.|+...-.
T Consensus 3 ~~adlil~nG~i~T~~~~~p~aeAvaI~dGrI~avG~~~~~~~~~~~~t~viDL~Gk~v~PGfvDaH~Hl~~~G~~~~~~ 82 (535)
T COG1574 3 MAADLILHNGRIYTMDEARPTAEAVAIKDGRIVAVGSDAELKALAGPATEVIDLKGKFVLPGFVDAHLHLISGGLSLLEL 82 (535)
T ss_pred cccceeEECCEEEeccCCCcceeEEEEcCCEEEEEcChHHHHhhcCCCceEEeCCCCEeccccchhhHHHHHhhhhhhcc
Confidence 46889999999999886 3678999999999999987432 246899999999999999999999866400
Q ss_pred -------------------------------------------------------------------------------C
Q 009410 120 -------------------------------------------------------------------------------G 120 (535)
Q Consensus 120 -------------------------------------------------------------------------------g 120 (535)
|
T Consensus 83 ~~~~~~~~~~~~~~i~~~a~~~~~~~w~~~vG~g~~~~~~~~~~~t~~~lD~~~~~~Pv~l~r~~~H~a~~Ns~aL~~~G 162 (535)
T COG1574 83 NLDGVRSLDDLLAALRRQAARTPPGQWVVVVGWGWDEQFWEERLPTLAELDAAAPDHPVLLIRLDGHVAVANSAALRLAG 162 (535)
T ss_pred cccccCCHHHHHHHHHHHHHhCCCCCceEEEEcChhhhccccCCCcHHHhhccCCCCCEEEEeccChHHHHhHHHHHHcC
Confidence 0
Q ss_pred CC--------------------------------------chhhhH----H-HHHHHHhCCcEEEeccccCCCCChHHHH
Q 009410 121 SE--------------------------------------TIDDFF----S-GQAAALAGGTTMHIDFVIPINGSLTAGF 157 (535)
Q Consensus 121 ~~--------------------------------------~~~~~~----~-~~~~~l~~GvTtv~d~~~~~~~~~~~~~ 157 (535)
.. .++... . +.+.+.+.|||++.|+.. . ......+
T Consensus 163 i~~~t~~p~gg~~~~d~~g~ptG~L~e~a~~~~~~~~~~~~~~~~~~~~~~~a~~~l~s~GiT~v~d~~~-~-~~~~~~~ 240 (535)
T COG1574 163 ITRDTPDPPGGIIGRDADGEPTGLLLENAQALVARLAPPPSPAEELEAAAARAARELNSLGITGVHDMAG-Y-QGYYADY 240 (535)
T ss_pred CCCCCCCCCCCcccccCCCCCCeeehHhhHHHHHHhcCCCCchHHHHHHHHHHHHHHHhcCCeEEEcccc-c-ccchhHH
Confidence 00 000100 1 333566899999999975 2 2223333
Q ss_pred HHHHHHhcc--cccccceeeeeecCChhhHHHHHHHHHH------cCCCEEEEEeec----------------C---CCC
Q 009410 158 EAYEKKAKN--SCMDYGFHMAITKWDEVVSDEMEVMVKE------KGINSFKFFMAY----------------K---GSF 210 (535)
Q Consensus 158 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~ik~~~~~----------------~---~~~ 210 (535)
......... ..+.+.......... ++....... .....+|+|.+. + |..
T Consensus 241 ~~~r~~~~~~~l~~rv~~~l~~~~~~----~~~~~~~~~~~~~~~~~~g~~K~f~Dgslg~rtA~l~~~y~d~~~~~G~~ 316 (535)
T COG1574 241 EAYRALAAGGELPVRVALLLFTEDLK----EERLDLLRQTGAKGLLQGGGVKLFADGSLGERTALLAAPYADGPGPSGEL 316 (535)
T ss_pred HHHHHHHhcCcceEEEEeeccccchh----hHHHhhcccCCccceeecCceEEEEeCCCCcchhhccCcccCCCCCCCCc
Confidence 333333322 222222221111111 111111111 223345666652 1 455
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEE
Q 009410 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (535)
Q Consensus 211 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 290 (535)
..+++.+.++++.|.++|+++.+|+.++.+++..++.++..... ....+.+..+.|
T Consensus 317 l~~~e~l~~~v~~a~~~gl~v~vHAiGD~Av~~~LdafE~~~~~------------------------~~~~~~r~rieH 372 (535)
T COG1574 317 LLTEEELEELVRAADERGLPVAVHAIGDGAVDAALDAFEKARKK------------------------NGLKGLRHRIEH 372 (535)
T ss_pred ccCHHHHHHHHHHHHHCCCcEEEEEechHHHHHHHHHHHHHhhh------------------------cCCccCCceeee
Confidence 77899999999999999999999999999888888765443221 112356678999
Q ss_pred ccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCC
Q 009410 291 VMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (535)
Q Consensus 291 ~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~ 370 (535)
+...+. ++++++++.|+ +++.+|+++..+.+.+.+ .+.. ...... .+++.++++|++++.|||.+.
T Consensus 373 ~~~v~~-~~i~R~~~Lgv--~~svQP~f~~~~~~~~~~-rlG~-~r~~~~---------~p~~~ll~~G~~la~gSD~Pv 438 (535)
T COG1574 373 AELVSP-DQIERFAKLGV--IASVQPNFLFSDGEWYVD-RLGE-ERASRS---------YPFRSLLKAGVPLAGGSDAPV 438 (535)
T ss_pred eeecCH-hHHHHHHhcCc--eEeeccccccccchHHHH-hhhh-hhhhcc---------CcHHHHHHCCCeEeccCCCCC
Confidence 998887 89999998875 455555555433222221 1111 111111 238999999999999999643
Q ss_pred CChhhhhcCCCCcccCcchHHHHHHHHHHH-HH--hcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCC
Q 009410 371 FNSTQKAFGIDDFRKIPNGIEERMHLVWDT-MV--ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPN 447 (535)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~-~~--~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~ 447 (535)
... +||. |++..+...-.. .. .+..||++|||++.|.++|++.|.++++|+|++||.|||+|+|.
T Consensus 439 -~~~------dP~~----~i~~AVtr~~~~g~~~~~~~~L~~~eAL~~yT~~~A~a~~~e~~~G~Le~G~~AD~~Vld~- 506 (535)
T COG1574 439 -EPY------DPWL----GIYAAVTRKTPGGRVLGPEERLTREEALRAYTEGGAYASGAEGEKGSLEPGKLADFAVLDR- 506 (535)
T ss_pred -CCC------ChHH----HHHHHHcCCCCCCCCCccccccCHHHHHHHHhhhhHHhhhccccccccccCceeeEEEecC-
Confidence 222 2443 333322211000 00 01159999999999999999999999999999999999999995
Q ss_pred CceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC
Q 009410 448 SSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 448 ~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~ 488 (535)
+++.++++.+.. -+|+.|+++|++||+.
T Consensus 507 d~f~~~~~~i~~-------------~~v~~T~~~Gk~VY~~ 534 (535)
T COG1574 507 DPFTVDPDSIKD-------------TKVVLTIVAGKVVYRA 534 (535)
T ss_pred CcccCChHHhcc-------------ceEEEEEEcCeEeecC
Confidence 466776655554 3899999999999975
No 49
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.5e-35 Score=291.43 Aligned_cols=344 Identities=21% Similarity=0.238 Sum_probs=209.6
Q ss_pred ccEEEEccEEEcC-CCceeeeEEEeCCEEEEeeCC-CCCCCCceEEecCCCEEeecccccccccccccCCCCchhh----
Q 009410 53 SKILIKGGTVVNA-HHQQIADVYVEDGIVVAVQPN-INVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDD---- 126 (535)
Q Consensus 53 ~~~vi~n~~vi~~-~~~~~~~I~I~~G~I~~Vg~~-~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~---- 126 (535)
..+++.+++.+++ ...+++.|+|+||||++|++. ...+++.++||++|++|+|||||+|+|+... +....+.
T Consensus 10 ~~~~~~~~~~~~~~~~i~~~~v~i~~GkI~~vg~~~~~~~~~~~viD~~G~~V~PGLID~HtHl~~~--~~~~~~~~~~~ 87 (406)
T COG1228 10 AMLATLAGRGLPGLGIIEDGAVLIEDGKIVAVGPEEIDIPAGAEVIDAKGKTVTPGLIDAHTHLGFG--GSRGGEFELRE 87 (406)
T ss_pred hhheeeccccCCCcceeecceEEEECCEEEEecCcccCCCCCCeEEeCCCCEEccceeecccccccc--CCccchhhhcc
Confidence 4578888888884 344679999999999999988 5667789999999999999999999999885 1110000
Q ss_pred ---------------------------------hHHHHHHHHhCCcEEEeccccCCCC-----ChHHHHHHHHHHhcccc
Q 009410 127 ---------------------------------FFSGQAAALAGGTTMHIDFVIPING-----SLTAGFEAYEKKAKNSC 168 (535)
Q Consensus 127 ---------------------------------~~~~~~~~l~~GvTtv~d~~~~~~~-----~~~~~~~~~~~~~~~~~ 168 (535)
....+..++.+|+|+.-........ ...+.........+...
T Consensus 88 ~~~~~~~i~~~~~gi~~~~~~~~~a~~~g~~~~~~~~l~~~~~~g~~~~e~~~~~g~~~~~e~~~~~~~~~~~~~~~~~~ 167 (406)
T COG1228 88 AGASYTEILAAGGGILPLDRGFTTARDGGLKATALPRLKRAGSAGVTTGERKSGYGLDLETEGGHLRAAAGLKESRPVAV 167 (406)
T ss_pred cCccHHHHHHhcCChhhhHHHHHHHhhcchHHHHHHHHHHHHHcCCcccceeeeecccccccccccchhhhccccccccc
Confidence 0011222355666665433221111 01111111110000000
Q ss_pred cccce-eeeeecC---C-hhhHHHHHHHHHHcCCCEEEEEee-cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHH
Q 009410 169 MDYGF-HMAITKW---D-EVVSDEMEVMVKEKGINSFKFFMA-YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVF 242 (535)
Q Consensus 169 ~~~~~-~~~~~~~---~-~~~~~~~~~~~~~~g~~~ik~~~~-~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~ 242 (535)
...+. ..+.... . ....+.+..+++.....++.-+.+ .......++++++++++.|++.|+++.+|++....
T Consensus 168 ~~t~~~~~~~~~~~~~~r~~~~~g~~~~i~~~a~~~l~~~~d~~~~~~~fs~~e~~~~l~~a~~~g~~v~~HA~~~~g-- 245 (406)
T COG1228 168 GSTPLAAHGVPEERKATREAYVAGARLLIKIVATGGLASFVDAFCEGGQFSPEEIRAVLAAALKAGIPVKAHAHGADG-- 245 (406)
T ss_pred cCccccccCCcccccchHHHHHHHHHHHHHHHHhccccchhhccccccccCHHHHHHHHHHHHHCCCceEEEecccch--
Confidence 00000 0001111 1 112222222121111111222222 22334568999999999999999999999987653
Q ss_pred HHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHH--cCCcEEeccccceEe
Q 009410 243 EGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARK--AGQRVIGEPVVSGLV 320 (535)
Q Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~--~g~~v~~~~~~~~~~ 320 (535)
.+...+.|.. .+.|....+. +....+++ .|.+ +++..+...+
T Consensus 246 --~~~A~~~g~~--------------------------------s~~H~~~ld~-~~~~~~a~~~~g~~-~~~l~p~~~~ 289 (406)
T COG1228 246 --IKLAIRLGAK--------------------------------SAEHGTLLDH-ETAALLAEKGAGTP-VPVLLPRTKF 289 (406)
T ss_pred --HHHHHHhCcc--------------------------------eehhhhhcCH-hHHHHHhhccCCCc-cccccchhhh
Confidence 3333333332 3556666665 77888888 6654 1222211000
Q ss_pred eCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHH
Q 009410 321 LDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDT 400 (535)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 400 (535)
. . .......++.+++.|++++++||+.+.+... .+.+.+..
T Consensus 290 ~-----------l-----------~e~~~~~~~~l~~~GV~vai~TD~~~~~~~~-----------------~l~~~m~l 330 (406)
T COG1228 290 E-----------L-----------RELDYKPARKLIDAGVKVAIGTDHNPGTSHG-----------------SLALEMAL 330 (406)
T ss_pred h-----------h-----------hcccchhHHHHHHCCCEEEEEcCCCCCchhh-----------------HHHHHHHH
Confidence 0 0 0011244889999999999999987765311 22333333
Q ss_pred HHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEE
Q 009410 401 MVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIA 480 (535)
Q Consensus 401 ~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~ 480 (535)
+++.+ ||++|||+++|.|||++||+++++|+||+||+|||||||+||+.++. |... ..+|.+||+
T Consensus 331 ~~~~g-mtp~EaL~a~T~naA~alG~~~~~Gsle~Gk~ADlvv~~~dp~~~i~------------y~~~--~~~v~~v~k 395 (406)
T COG1228 331 AVRLG-MTPEEALKAATINAAKALGLADKVGSLEPGKDADLVVWDGDPLADIP------------YFLG--LNKVEAVIK 395 (406)
T ss_pred HHHcC-CCHHHHHHHHHHHHHHHcCCccccccccCCCccCEEEEcCCChhhcc------------cccc--CCceEEEEE
Confidence 44455 99999999999999999999999999999999999999999875542 2111 358999999
Q ss_pred CCEEEEECCe
Q 009410 481 GGRVVWENDE 490 (535)
Q Consensus 481 ~Gr~V~~~~~ 490 (535)
+|+++++.+.
T Consensus 396 ~G~~~~~~~~ 405 (406)
T COG1228 396 DGKVVYERGS 405 (406)
T ss_pred CCEEeecCCC
Confidence 9999998764
No 50
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=100.00 E-value=6.8e-34 Score=287.40 Aligned_cols=347 Identities=16% Similarity=0.224 Sum_probs=224.6
Q ss_pred cccEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHH
Q 009410 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~ 129 (535)
+.+++|+|++|+++.. ...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+... +.. ....
T Consensus 2 ~~~~li~~~~i~~~~~~~~~~~~i~i~~g~I~~i~~~~~-~~~~~viD~~g~~v~PGliD~H~H~~~~--g~~---~~~~ 75 (379)
T PRK12394 2 KNDILITNGHIIDPARNINEINNLRIINDIIVDADKYPV-ASETRIIHADGCIVTPGLIDYHAHVFYD--GTE---GGVR 75 (379)
T ss_pred CccEEEECcEEECCCCCcccccEEEEECCEEEEEcCCCC-CCCCeEEECCCCEEECCEEEeeecCCCC--Ccc---cccC
Confidence 4578999999998763 356799999999999987432 2356899999999999999999998654 211 1122
Q ss_pred HHHHHHhCCcEEEeccccCCCCChHHHHHHH---HHHhcccccccceeeeeec--C--Ch-h--hHHHHHHHHHH--cCC
Q 009410 130 GQAAALAGGTTMHIDFVIPINGSLTAGFEAY---EKKAKNSCMDYGFHMAITK--W--DE-V--VSDEMEVMVKE--KGI 197 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~--~~-~--~~~~~~~~~~~--~g~ 197 (535)
....++++||||++|+............+.. .+.+.+.++.++++..... . .. + ..++..++.++ .+.
T Consensus 76 ~~~~~l~~G~Ttv~d~g~~~~~~~~~~~~~~~a~~~~gira~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (379)
T PRK12394 76 PDMYMPPNGVTTVVDAGSAGTANFDAFYRTVICASKVRIKAFLTVSPPGQTWSGYQENYDPDNIDENKIHALFRQYRNVL 155 (379)
T ss_pred HHHHHHhCCccEEEECCCCCcccHHHHHHHHhhhhcceeeeEEeeecccccccCcccccChhHCCHHHHHHHHHHCcCcE
Confidence 2355789999999999654332222222221 2222334444444432211 0 01 1 13455555533 456
Q ss_pred CEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHH
Q 009410 198 NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR 277 (535)
Q Consensus 198 ~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (535)
.++|++.........+++.+++.++.|+++|+++.+|+.+..... .+ .+
T Consensus 156 ~g~ki~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~--~~----------------------------~~- 204 (379)
T PRK12394 156 QGLKLRVQTEDIAEYGLKPLTETLRIANDLRCPVAVHSTHPVLPM--KE----------------------------LV- 204 (379)
T ss_pred EEEEEEEecccccccchHHHHHHHHHHHHcCCCEEEEeCCCCccH--HH----------------------------HH-
Confidence 677776543322356799999999999999999999996542110 00 01
Q ss_pred HHHhcCCCEEEEEccC----------HHHHHHHHHHHHcCCcEE-eccccceEeeCcccccCcCccccceeEEcCCCCCc
Q 009410 278 LAEFVNTPLYVVHVMS----------MDAMEEIAKARKAGQRVI-GEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS 346 (535)
Q Consensus 278 ~~~~~~~~~~~~H~~~----------~~~~~~~~~~~~~g~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 346 (535)
...+......|+.. ....+.+..+++.|+.+. .++ +..
T Consensus 205 --~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g-----------------------------~s~ 253 (379)
T PRK12394 205 --SLLRRGDIIAHAFHGKGSTILTEEGAVLAEVRQARERGVIFDAANG-----------------------------RSH 253 (379)
T ss_pred --HhcCCCCEEEecCCCCCCCcCCCCCCChHHHHHHHhCCeEEEecCC-----------------------------ccc
Confidence 11111223455533 111356677788886542 221 111
Q ss_pred ccHHHHHHHHhcCC-eEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcC
Q 009410 347 GHNKALQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 425 (535)
Q Consensus 347 ~~~~~~~~~l~~Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg 425 (535)
.+...+++++++|+ ++++|||+.+.+.... ++ ..+..+++++. ..+++++++++++|.|||+++|
T Consensus 254 ~~~~~~~~~l~~G~~~~~lgTD~~~~~~~~~-----~~--------~~l~~~~~~~~-~~~~~~~~~~~~at~~~a~~~g 319 (379)
T PRK12394 254 FDMNVARRAIANGFLPDIISSDLSTITKLAW-----PV--------YSLPWVLSKYL-ALGMALEDVINACTHTPAVLMG 319 (379)
T ss_pred cchHHHHHHHHCCCCceEEECCCCCCCcccC-----cc--------chHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHhC
Confidence 12355778999995 8999999887642211 11 13445555555 4569999999999999999999
Q ss_pred CCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEee----EEEEEEECCEEEEECCe
Q 009410 426 VYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKG----KVEVTIAGGRVVWENDE 490 (535)
Q Consensus 426 l~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~----~v~~v~~~Gr~V~~~~~ 490 (535)
++++.|+|++|+.|||+++|.+.++... ++ +.|..+.+ +|..||++|++||++..
T Consensus 320 ~~~~~G~i~~G~~ADl~~~~~~~~~~~~-~d---------~~g~~~~~~~~~~v~~t~v~G~~v~~~~~ 378 (379)
T PRK12394 320 MAAEIGTLAPGAFADIAIFKLKNRHVEF-AD---------IHGETLTGTHVLVPQMTIKSGEILYRQID 378 (379)
T ss_pred CCCCCCccCCCCccCEEEEecCcCccee-cc---------CCCCEEEeeeecceEEEEECCEEEEecCC
Confidence 9657899999999999999988765432 21 34544455 79999999999998643
No 51
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=100.00 E-value=2.3e-34 Score=294.10 Aligned_cols=355 Identities=20% Similarity=0.194 Sum_probs=225.5
Q ss_pred eeeeEEEeCCEEEEeeCCCCC----CCCceEEecCCCEEeecccccccccccccC-CC--------------------Cc
Q 009410 69 QIADVYVEDGIVVAVQPNINV----GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--------------------ET 123 (535)
Q Consensus 69 ~~~~I~I~~G~I~~Vg~~~~~----~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~--------------------~~ 123 (535)
++++|+|+||+|++||+.... +.+.++||++|++|+|||||+|+|+..... |. .+
T Consensus 5 ~~~~V~V~~g~I~~Vg~~~~~~~~~~~~~~viD~~g~~v~PGlId~H~Hl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (401)
T TIGR02967 5 EDGLLVVENGRIVAVGDYAELKETLPAGVEIDDYRGHLIMPGFIDTHIHYPQTEMIASYGEQLLEWLEKYTFPTEARFAD 84 (401)
T ss_pred eceEEEEECCEEEEecCcchhhhccCCCCeEEeCCCCEEecceeecccCchhhhhcccCCchHHHHHhhCcCccccccCC
Confidence 468999999999999985332 335789999999999999999999865311 10 01
Q ss_pred hhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceee---ee--ecCChhhHHHHHHHHHH
Q 009410 124 IDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM---AI--TKWDEVVSDEMEVMVKE 194 (535)
Q Consensus 124 ~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~ 194 (535)
++... .....++++||||++|+............+...+.+.+......... +. .....+..+...+++++
T Consensus 85 ~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~ 164 (401)
T TIGR02967 85 PDHAEEVAEFFLDELLRNGTTTALVFATVHPESVDALFEAALKRGMRMIAGKVLMDRNAPDYLRDTAESSYDESKALIER 164 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEeccccCHHHHHHHHHHHHHCCCeEEEeeeeecCCCCcccccCHHHHHHHHHHHHHH
Confidence 11111 22356789999999998643322233445555555554333222111 00 01112233344444422
Q ss_pred -cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc-CCeEEEEcC-ChhhHHHHHHHHHHcCCCCcccccccCChhhHHHH
Q 009410 195 -KGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAE-NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (535)
Q Consensus 195 -~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (535)
.+...+++.+.++....++++.++++++.|+++ |+++++|+. +........+. .|.. + .
T Consensus 165 ~~~~g~i~~~~~~~~~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~~---~~~~---------~------~ 226 (401)
T TIGR02967 165 WHGKGRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKEL---FPEA---------K------D 226 (401)
T ss_pred HhCcCCceEEEECCcCCcCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHHH---cCCC---------C------c
Confidence 344457777777777888999999999999999 999999985 44333333221 1211 0 0
Q ss_pred HHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHH
Q 009410 272 TTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (535)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~ 351 (535)
..+.++-....+.++.+.|+...++ ++++++++.|+.++.||... +..+... .+
T Consensus 227 ~~~~l~~~g~lg~~~~~~H~~~~~~-~~~~~l~~~g~~v~~~P~~~-------------~~~~~g~------------~~ 280 (401)
T TIGR02967 227 YLDVYDHYGLLGRRSVFAHCIHLSD-EECQRLAETGAAIAHCPTSN-------------LFLGSGL------------FN 280 (401)
T ss_pred HHHHHHHCCCCCCCeEEEecccCCH-HHHHHHHHcCCeEEEChHHH-------------HHhccCC------------CC
Confidence 1111222233466788999998887 88999999999999998752 1111111 22
Q ss_pred HHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCc
Q 009410 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKG 431 (535)
Q Consensus 352 ~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~G 431 (535)
+++++++|+++++|||+...... . +|. +++......++. ..++++.++|+++|.|||+++|+++++|
T Consensus 281 ~~~~~~~Gv~v~lGtD~~~~~~~-~-----~~~------~~~~~~~~~~~~-~~~~~~~~~l~~aT~~~A~~lg~~~~~G 347 (401)
T TIGR02967 281 LKKALEHGVRVGLGTDVGGGTSF-S-----MLQ------TLREAYKVSQLQ-GARLSPFEAFYLATLGGARALDLDDRIG 347 (401)
T ss_pred HHHHHHCCCeEEEecCCCCCCCc-C-----HHH------HHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHHhCCcCCcc
Confidence 78899999999999996432111 1 111 222222222222 3469999999999999999999977899
Q ss_pred cccCCCCccEEEEcCCCceeee----c-CCccccCCCCCCCCeeEeeEEEEEEECC
Q 009410 432 AILVGSDADIIIFNPNSSFEIT----A-RSHHSRLDTNVYEGRRVKGKVEVTIAGG 482 (535)
Q Consensus 432 sI~~Gk~ADlvvld~~~~~~i~----~-~~~~~~~~~~p~~~~~~~~~v~~v~~~G 482 (535)
+|++||.||||++|.+.+...+ . ....++.....|.+. ..+|+.|||+|
T Consensus 348 ~i~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~v~~v~v~G 401 (401)
T TIGR02967 348 NFEPGKEADFVVLDPAATPLLALRFEGADTLEDKLFKLMYLGD--DRNVAETYVAG 401 (401)
T ss_pred ccCCCCccCEEEEcCCCCcccccccccccchhhHHHHheeecC--ccceeEEEeCC
Confidence 9999999999999987653221 0 011233334455443 45899999998
No 52
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=100.00 E-value=5.1e-34 Score=285.83 Aligned_cols=353 Identities=18% Similarity=0.191 Sum_probs=240.0
Q ss_pred EEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeeccccccccccccc----CCCCc--hhhhHH
Q 009410 56 LIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF----MGSET--IDDFFS 129 (535)
Q Consensus 56 vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~----~g~~~--~~~~~~ 129 (535)
+|+|++|+++++...++|.|+||+|++|++... ...++||++|++|+|||||+|+|..... .+... .+.+..
T Consensus 1 ~i~~~~vv~~~~~~~~~i~i~dg~I~~i~~~~~--~~~~~iD~~G~~v~PGlID~H~h~~e~~~~prp~~~~~~~~~~~~ 78 (376)
T TIGR02318 1 VLSNARLVLEDEVVEGSVVIEDGAIADIGEGPV--ALAEAIDGEGDLLLPGLIDLHTDNLERHMSPRPGVDWPIDAAIVE 78 (376)
T ss_pred CEeCeEEECCCceEeeeEEEECCEEEEecCCCC--CCCceEeCCCCEEeccEEEcccCccccCcCCCCCCCcchHHHHHH
Confidence 489999998777666799999999999997432 2466899999999999999999987720 03211 266778
Q ss_pred HHHHHHhCCcEEEeccccCC----C-C---ChHHHHHHHHHHhcc--cccccceeeeeecCChhhHHHHHHHHHHcCCCE
Q 009410 130 GQAAALAGGTTMHIDFVIPI----N-G---SLTAGFEAYEKKAKN--SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~----~-~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 199 (535)
..++++++||||++|+.... . . .....++.......+ ..+++++|.+......+..+++..+. +.|...
T Consensus 79 ~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~h~~~e~~~~~~~~~l~~~~-~~g~~~ 157 (376)
T TIGR02318 79 HDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDRGLLRADHRLHLRCELPNEEVLPELEELI-DDPRVD 157 (376)
T ss_pred HHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhcCchhhhceeEEEEEecCccHHHHHHHHh-cCCCcC
Confidence 88899999999999995322 1 1 222233222333333 77899999988766666788888887 789999
Q ss_pred EEEEeecCCC--CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHH
Q 009410 200 FKFFMAYKGS--FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR 277 (535)
Q Consensus 200 ik~~~~~~~~--~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (535)
+|.|++..+. +..+.+.+.+.+.. +.| ..|++.......... ..+.. ..+.+.++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g---~~~~e~~~~~~~~~~---~~~~~-------------~~e~i~~~v~ 216 (376)
T TIGR02318 158 LISLMDHTPGQRQFRDLEKYREYYRG--KRG---LSDDEFDEIVEERIA---RRAEY-------------GLANRSEIAA 216 (376)
T ss_pred EEEEeCCCCCcccccCHHHHHHHHHh--hcC---CCHHHHHHHHHHHHH---HHhhc-------------cHHHHHHHHH
Confidence 9999875432 24566666666654 555 667776544332221 11110 1477889999
Q ss_pred HHHhcCCCEEEEEcc-CHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccce-eEEcC-CCCCccc--HHHH
Q 009410 278 LAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK-YVMSP-PIRASGH--NKAL 352 (535)
Q Consensus 278 ~~~~~~~~~~~~H~~-~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p-~~r~~~~--~~~~ 352 (535)
+++..+.++ ..|.. .. +.+..+++.|+.++-.+ ++.+.... -...|.. .+..| +.|.... ..++
T Consensus 217 ~A~~~G~~v-~sH~~~~~---e~i~~a~~~Gv~~~E~~------~t~e~a~~-~~~~G~~v~~~~p~~~r~~~~~~~~~l 285 (376)
T TIGR02318 217 LARARGIPL-ASHDDDTP---EHVAEAHDLGVTISEFP------TTLEAAKE-ARSLGMQILMGAPNIVRGGSHSGNLSA 285 (376)
T ss_pred HHHHCCCeE-EEecCCCH---HHHHHHHHCCCChhccC------CCHHHHHH-HHHcCCeEEECCccccccccccchHHH
Confidence 999999997 77884 43 45677777787433211 11111110 0011222 22223 3343332 6789
Q ss_pred HHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCcc
Q 009410 353 QAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGA 432 (535)
Q Consensus 353 ~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~Gs 432 (535)
+++++.|+.++++||+.|.. .+...+.......++++.++++++|.|||+++|++ ++|+
T Consensus 286 ~~~~~~G~~~~l~SD~~p~~--------------------~l~~~~~~~~~~~gl~~~~al~~~T~npA~~lgl~-~~G~ 344 (376)
T TIGR02318 286 RELAHEGLLDVLASDYVPAS--------------------LLLAAFQLADDVEGIPLPQAVKMVTKNPARAVGLS-DRGS 344 (376)
T ss_pred HHHHHCCCcEEEEcCCCcHH--------------------HHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHcCCC-CCCc
Confidence 99999999999999986631 11222222233447999999999999999999995 6799
Q ss_pred ccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEE
Q 009410 433 ILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVW 486 (535)
Q Consensus 433 I~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~ 486 (535)
|++|++|||+++|.+.. ...+..||++|++||
T Consensus 345 I~~G~~ADlvvvd~~~~----------------------~~~v~~v~~~G~~v~ 376 (376)
T TIGR02318 345 IAPGKRADLVRVHRVDG----------------------VPRIRAVWRAGRRVY 376 (376)
T ss_pred CCCCCcccEEEEcCCCC----------------------CccceEEEECCEEeC
Confidence 99999999999996311 137889999999986
No 53
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=100.00 E-value=7.8e-34 Score=291.25 Aligned_cols=356 Identities=17% Similarity=0.143 Sum_probs=226.3
Q ss_pred eeeeEEEeCCEEEEeeCCCC----CCCCceEEecCCCEEeeccccccccccccc-CCC-C--------------------
Q 009410 69 QIADVYVEDGIVVAVQPNIN----VGDDVKVLDATGKFVMPGGIDPHTHLAMEF-MGS-E-------------------- 122 (535)
Q Consensus 69 ~~~~I~I~~G~I~~Vg~~~~----~~~~~~vID~~G~~vlPGlID~H~H~~~~~-~g~-~-------------------- 122 (535)
++++|+|+||+|++||+... .+++.++||++|++|+|||||+|+|++... .|. .
T Consensus 25 ~~g~V~v~~g~I~~vG~~~~~~~~~~~~~~viD~~g~~v~PGlVn~H~Hl~~~~~rg~~~~~~l~~wl~~~~~~~e~~~~ 104 (429)
T cd01303 25 EDGLIVVVDGNIIAAGAAETLKRAAKPGARVIDSPNQFILPGFIDTHIHAPQYANIGSGLGEPLLDWLETYTFPEEAKFA 104 (429)
T ss_pred CCeEEEEECCEEEEeCchhhhhhhcCCCceEEcCCCCEEecceeeeeecccccccccccCCCcHHHHHHhhhhHHHHhcC
Confidence 57899999999999998532 234578999999999999999999997642 111 0
Q ss_pred chhhh----HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee-e----cCChhhHHHHHHHHH
Q 009410 123 TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-T----KWDEVVSDEMEVMVK 193 (535)
Q Consensus 123 ~~~~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~ 193 (535)
+.+.. ......++++||||++|+...........+++..+.+.+..+........ + ....+..+....+.+
T Consensus 105 ~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 184 (429)
T cd01303 105 DPAYAREVYGRFLDELLRNGTTTACYFATIHPESTEALFEEAAKRGQRAIAGKVCMDRNAPEYYRDTAESSYRDTKRLIE 184 (429)
T ss_pred CHHHHHHHHHHHHHHHHhCCceEEEeecccChhHHHHHHHHHHHhCCeEEEeeeeecCCCCcccccCHHHHHHHHHHHHH
Confidence 01111 12234568999999998864332234455566666666644432221100 1 001112222222222
Q ss_pred H-cC-CCEEEEEeecCCCCcCCHHHHHHHHHHHHhcC-CeEEEEcCC-hhhHHHHHHHHHHcCCCCcccccccCChhhHH
Q 009410 194 E-KG-INSFKFFMAYKGSFMINDELLIEGFKRCKSLG-ALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (535)
Q Consensus 194 ~-~g-~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g-~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 269 (535)
. .+ ...+...+.++....++++.++++.+.|+++| +++++|+.+ ..+.....+ ..|-. ..
T Consensus 185 ~~~~~~~~v~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~e~~~~~~---~~g~~-------~~------ 248 (429)
T cd01303 185 RWHGKSGRVKPAITPRFAPSCSEELLAALGKLAKEHPDLHIQTHISENLDEIAWVKE---LFPGA-------RD------ 248 (429)
T ss_pred HHhCcCCceEEEEecCcCCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHHHHHHHHH---HcCCC-------CC------
Confidence 1 22 14466666777778889999999999999999 999999954 332222211 11100 00
Q ss_pred HHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccH
Q 009410 270 EATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHN 349 (535)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ 349 (535)
..+.++-....+.++.+.|+...++ ++++++++.|+.++.||..+. ..+...
T Consensus 249 --p~~~l~~~G~l~~~~~l~H~~~l~~-~~~~~l~~~g~~v~~~P~sn~-------------~l~~g~------------ 300 (429)
T cd01303 249 --YLDVYDKYGLLTEKTVLAHCVHLSE-EEFNLLKERGASVAHCPTSNL-------------FLGSGL------------ 300 (429)
T ss_pred --HHHHHHHCCCCCCCcEEEeCCCCCH-HHHHHHHHcCCEEEECccchh-------------hhccCC------------
Confidence 1112222233456788999999887 889999999999999987521 111111
Q ss_pred HHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh-----cCCCCHHHHHHHHhHHHHHHc
Q 009410 350 KALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE-----SGQISVTDYVRLTSTECARIF 424 (535)
Q Consensus 350 ~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~-----~~~ls~~eal~~~T~~~A~~l 424 (535)
..+++++++|+++++|||+...+.. ++|. ++.+....++... ..+++++++|+++|.+||+++
T Consensus 301 ~~~~~~~~~Gv~v~lGtD~~~~~~~------d~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~gA~~l 368 (429)
T cd01303 301 FDVRKLLDAGIKVGLGTDVGGGTSF------SMLD------TLRQAYKVSRLLGYELGGHAKLSPAEAFYLATLGGAEAL 368 (429)
T ss_pred CCHHHHHHCCCeEEEeccCCCCCCc------cHHH------HHHHHHHHHHhhccccCCcCCCCHHHHHHHHhhHHHHHc
Confidence 2388999999999999997532211 1222 2232222222221 235899999999999999999
Q ss_pred CCCCCCccccCCCCccEEEEcCCCceee-ec----CCccccCCCCCCCCeeEeeEEEEEEECC
Q 009410 425 NVYPRKGAILVGSDADIIIFNPNSSFEI-TA----RSHHSRLDTNVYEGRRVKGKVEVTIAGG 482 (535)
Q Consensus 425 gl~~~~GsI~~Gk~ADlvvld~~~~~~i-~~----~~~~~~~~~~p~~~~~~~~~v~~v~~~G 482 (535)
|+++++|+|++||+||||++|.+++... +. ..+.++.....|.+. ..+|+.|||+|
T Consensus 369 g~~~~~Gsle~Gk~ADlvvld~~~~~~~~p~~~~~~~~~d~~~~lV~~~~--~~~V~~v~V~G 429 (429)
T cd01303 369 GLDDKIGNFEVGKEFDAVVIDPSATPLLADRMFRVESLEEALFKFLYLGD--DRNIREVYVAG 429 (429)
T ss_pred CCCCCCcCcCCCCccCEEEEcCCCccccccccccccchhhHHHHHeeeCC--CCCeeEEEeCC
Confidence 9988899999999999999998876433 21 011234444555543 45899999998
No 54
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=100.00 E-value=7.8e-34 Score=291.14 Aligned_cols=350 Identities=20% Similarity=0.196 Sum_probs=213.2
Q ss_pred EEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-CC--------------
Q 009410 57 IKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS-------------- 121 (535)
Q Consensus 57 i~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~-------------- 121 (535)
|+|++|+|+. ..+++|+|+||+|++|++....+++.++||++|++|+|||||+|+|+...+. +.
T Consensus 2 ~~~~~~~~~~-~~~~~v~I~~g~I~~Vg~~~~~~~~~~vID~~g~~v~PGlId~H~H~~~~~~~~~~~~~~~~~~~~~~~ 80 (398)
T cd01293 2 LRNARLADGG-TALVDIAIEDGRIAAIGPALAVPPDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNNSGGTLLEAII 80 (398)
T ss_pred eeeeEEeCCC-ceEEEEEEECCEEEEEecCCCCCCCCceEeCCCCEEccCEeeeeeccCcccccCCCCCCCccccHHHHH
Confidence 7899999974 5789999999999999987654557899999999999999999999976311 11
Q ss_pred --------Cchhhh----HHHHHHHHhCCcEEEeccccCCCC---ChHHHH-HHHHHHhcccccccceeeeee-cCChhh
Q 009410 122 --------ETIDDF----FSGQAAALAGGTTMHIDFVIPING---SLTAGF-EAYEKKAKNSCMDYGFHMAIT-KWDEVV 184 (535)
Q Consensus 122 --------~~~~~~----~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 184 (535)
.++++. ...+..++++||||++++...... ...... +.......+............ ....+.
T Consensus 81 ~~~~~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (398)
T cd01293 81 AWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQIVAFPQHGLLSTPGG 160 (398)
T ss_pred HHHHHHhccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhccceEEEEeccCccccCCCCH
Confidence 111121 223456789999999876543221 111122 211111111111100000000 011334
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhh-HHHHHHHHHHcCCCCcccccccC
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA-VFEGQKRMIELGITGPEGHALSR 263 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~ 263 (535)
.+.+++.. +.+.+.++.+ .+......+++.++++++.|+++|+++.+|+..... ...
T Consensus 161 ~~~v~~~~-~~g~~~~~~~-~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~-------------------- 218 (398)
T cd01293 161 EELMREAL-KMGADVVGGI-PPAEIDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGSR-------------------- 218 (398)
T ss_pred HHHHHHHH-HhCCCEEeCC-CCCcCCccHHHHHHHHHHHHHHhCCCCEEEeCCCCCcchh--------------------
Confidence 45555555 4455544322 222234567899999999999999999999854321 100
Q ss_pred ChhhHHHHHHHHHHHHHhcC--CCEEEEEccCHHH------HHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccc
Q 009410 264 PPLLEGEATTRAIRLAEFVN--TPLYVVHVMSMDA------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA 335 (535)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~--~~~~~~H~~~~~~------~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (535)
.+.+.++.....+ .++.+.|+..... .+.++++++.|+.+++||.....+..... .+..
T Consensus 219 -------~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~s~~~l~~~~~----~~~~-- 285 (398)
T cd01293 219 -------TLEELAEEAERRGMQGRVTCSHATALGSLPEAEVSRLADLLAEAGISVVSLPPINLYLQGRED----TTPK-- 285 (398)
T ss_pred -------HHHHHHHHHHHhCCCCCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEEeCCCcchhhccccc----CCCC--
Confidence 1112222233333 3577899876531 25689999999999999876432211100 0000
Q ss_pred eeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCC--CChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCC----CH
Q 009410 336 KYVMSPPIRASGHNKALQAALATGILQLVGTDHCA--FNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQI----SV 409 (535)
Q Consensus 336 ~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~--~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~l----s~ 409 (535)
.....++++++++|+++++|||+.. +..... .++|. .+... ....++ +.
T Consensus 286 ----------~~~~~~~~~~~~~Gv~v~lGTD~~~~~~~~~~~---~~~~~--------~~~~~----~~~~~~~~~~~~ 340 (398)
T cd01293 286 ----------RRGVTPVKELRAAGVNVALGSDNVRDPWYPFGS---GDMLE--------VANLA----AHIAQLGTPEDL 340 (398)
T ss_pred ----------CCCCCcHHHHHHCCCeEEECCCCCCCCCcCCCC---CCHHH--------HHHHH----HHHHcCCChhhH
Confidence 0112348999999999999999742 111000 00011 11111 111234 34
Q ss_pred HHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEE
Q 009410 410 TDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVV 485 (535)
Q Consensus 410 ~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V 485 (535)
+++|+++|.|+|+++|+ +.|+|++||.||||++|.|++.++.. ...++..||++|+++
T Consensus 341 ~~al~~aT~~~A~~lg~--~~G~l~~Gk~ADlv~~d~~~~~~~~~----------------~~~~~~~v~~~G~~~ 398 (398)
T cd01293 341 ALALDLITGNAARALGL--EDYGIKVGCPADLVLLDAEDVAEAVA----------------RQPPRRVVIRKGRVV 398 (398)
T ss_pred HHHHHhcChhhhhhcCC--cCcccccCCcceEEEECCCCHHHHHh----------------cCCCccEEEECCEEC
Confidence 78999999999999999 57999999999999999987654421 014789999999975
No 55
>PRK09356 imidazolonepropionase; Validated
Probab=100.00 E-value=2.5e-33 Score=287.28 Aligned_cols=346 Identities=20% Similarity=0.187 Sum_probs=215.9
Q ss_pred CcccEEEEccEEEcCCC--------ceeeeEEEeCCEEEEeeCCCCCC--CCceEEecCCCEEeecccccccccccccC-
Q 009410 51 SSSKILIKGGTVVNAHH--------QQIADVYVEDGIVVAVQPNINVG--DDVKVLDATGKFVMPGGIDPHTHLAMEFM- 119 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~--------~~~~~I~I~~G~I~~Vg~~~~~~--~~~~vID~~G~~vlPGlID~H~H~~~~~~- 119 (535)
|+++++|+|++|++++. .++++|+|+||||++|++..+.+ .+.++||+.|++|||||||+|+|+.....
T Consensus 1 ~~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~ 80 (406)
T PRK09356 1 MMADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPAAYAAEVIDAGGKLVTPGLIDCHTHLVFGGNR 80 (406)
T ss_pred CCceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCccccccccCceEEECCCCEEeeceEecCCCcccCCCc
Confidence 35779999999998753 24789999999999999865433 23689999999999999999999975411
Q ss_pred C---------C---------------------Cchhhh----HHHHHHHHhCCcEEEeccccCCCC--ChHHHHHHHHHH
Q 009410 120 G---------S---------------------ETIDDF----FSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKK 163 (535)
Q Consensus 120 g---------~---------------------~~~~~~----~~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~ 163 (535)
+ . .+++++ ...+..++++||||+.++...... .....++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T PRK09356 81 ANEFELRLQGVSYEEIAAQGGGILSTVRATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYGLDLETELKMLRVARRL 160 (406)
T ss_pred HHHHHHHHCCCcHHHHHHhcCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCHHHHHHHHHHHHHH
Confidence 0 0 011111 122345689999999976422111 112223333333
Q ss_pred hcccccccce-ee---eeec---CC-hhhHHH----HHHH-HHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCe
Q 009410 164 AKNSCMDYGF-HM---AITK---WD-EVVSDE----MEVM-VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGAL 230 (535)
Q Consensus 164 ~~~~~~~~~~-~~---~~~~---~~-~~~~~~----~~~~-~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 230 (535)
+.+..+.+.. .. .... .. .+..+. +.+. ....++..++.+.. ....+.+.++++++.|+++|++
T Consensus 161 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~l~~~~~~A~~~g~~ 237 (406)
T PRK09356 161 GEEHPVDVVTTFLGAHAVPPEYKGRPDAYIDLVCEEMLPAVAEEGLADAVDVFCE---TGAFSVEQSERVLEAAKALGLP 237 (406)
T ss_pred hhhCCCceEeeeeecccCCccccCCHHHHHHHHHHHHhHHHHhcCCcceEEEEec---CCCCCHHHHHHHHHHHHHCCCC
Confidence 3222111110 00 0000 01 111111 1111 11234556655432 2346799999999999999999
Q ss_pred EEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcE
Q 009410 231 AMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRV 310 (535)
Q Consensus 231 v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v 310 (535)
+.+|+....... ..+.. ...+ ...+.|+...++ ++++++++.|+.+
T Consensus 238 v~~H~~~~~~~~-~~~~~-------------------------------~~~~-~~~~~H~~~~~~-~~~~~la~~g~~~ 283 (406)
T PRK09356 238 VKIHAEQLSNLG-GAELA-------------------------------AEYG-ALSADHLEYLDE-AGIAAMAEAGTVA 283 (406)
T ss_pred EEEEEecccCCC-HHHHH-------------------------------HHcC-CcEehHhhcCCH-HHHHHHHHhCCEE
Confidence 999995421100 01110 1112 124668777766 7899999999999
Q ss_pred EeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchH
Q 009410 311 IGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGI 390 (535)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~ 390 (535)
+.||..... .+.. ...++++++++|+++++|||+.+... ++.
T Consensus 284 ~~~P~~~~~-------------l~~~-----------~~~~~~~l~~~Gi~v~lgtD~~~~~~--------~~~------ 325 (406)
T PRK09356 284 VLLPGAFYF-------------LRET-----------QYPPARLLRDAGVPVALATDFNPGSS--------PTE------ 325 (406)
T ss_pred EECccchhh-------------cCcc-----------cCchHHHHHHCCCeEEEeCCCCCCCC--------hhH------
Confidence 888874211 1000 01237888999999999999744111 111
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCee
Q 009410 391 EERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRR 470 (535)
Q Consensus 391 ~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~ 470 (535)
.+...+.......+++++++|+++|.|||+++|+++++|+|++||.|||||+|.+++..+ ++..
T Consensus 326 --~~~~~~~~~~~~~~l~~~~~l~~~T~~~A~~~g~~~~~G~i~~G~~AD~vvld~~~~~~~------------~~~~-- 389 (406)
T PRK09356 326 --SLLLAMNMACTLFRLTPEEALAAVTINAARALGRQDTHGSLEVGKKADLVIWDAPSPAEL------------PYHF-- 389 (406)
T ss_pred --HHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEECCCchhhh------------hhhh--
Confidence 122222222234579999999999999999999988899999999999999998765322 1111
Q ss_pred EeeEEEEEEECCEEEEE
Q 009410 471 VKGKVEVTIAGGRVVWE 487 (535)
Q Consensus 471 ~~~~v~~v~~~Gr~V~~ 487 (535)
...+|..||++|++||+
T Consensus 390 ~~~~v~~v~v~G~~vy~ 406 (406)
T PRK09356 390 GVNPVETVVKNGEVVVD 406 (406)
T ss_pred CCCCccEEEECCEEeeC
Confidence 13589999999999984
No 56
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=2.5e-33 Score=284.05 Aligned_cols=354 Identities=16% Similarity=0.203 Sum_probs=225.7
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCC------------CCCceEEecCCCEEeecccccccccccccC
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~------------~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 119 (535)
..+++|+|++|+|..+...++|.|+||+|++|++.... ..++++||++|++|+|||||+|+|+..+
T Consensus 70 ~~DlVI~Na~IiD~~gi~~adI~IkDGrIvaIG~~~~p~~~~gv~~~~~ig~~tevIDaeG~iV~PG~ID~HVH~~~P-- 147 (573)
T PRK13206 70 APDTVITGAVILDHWGIVKADVGIRDGRIVAIGKAGNPDIMDGVHPDLVIGPSTEIIAGNGRILTAGAIDCHVHFICP-- 147 (573)
T ss_pred CCCEEEECeEEECCCCeEEEEEEEECCEEEEEeCCCCccccccccccccCCCCCEEEECCCCEEEeCEEeeeeccCCc--
Confidence 56899999999997777778999999999999974211 1347899999999999999999998755
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCC----C----ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPIN----G----SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (535)
+. .++++++||||+++++..+. . .....++.+.+.....+++++++... +....+++.++
T Consensus 148 g~---------~~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~l~~~~~aa~~~pvn~g~~g~g---~~~~~~~L~el 215 (573)
T PRK13206 148 QI---------VDEALAAGITTLIGGGTGPAEGSKATTVTPGAWHLARMLEALDGWPVNVALLGKG---NTVSAEALWEQ 215 (573)
T ss_pred hH---------HHHHHcCCeEEEEcCCCCccccCcccccccchhHHHHHHHHhhcCceeEEEecCc---CcCCHHHHHHH
Confidence 21 37889999999999732221 1 11112333344444466777776532 11223567777
Q ss_pred HHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHH
Q 009410 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (535)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (535)
. +.|+.++|++.+| ..+++.+.++++.|++++.++.+|+++..+..
T Consensus 216 ~-~aGA~GfKi~~d~----g~t~~~i~~aL~~A~~~gv~V~iHadtlne~g----------------------------- 261 (573)
T PRK13206 216 L-RGGAGGFKLHEDW----GSTPAAIDACLRVADAAGVQVALHSDTLNEAG----------------------------- 261 (573)
T ss_pred H-HCCCcEEeecCcc----CCCHHHHHHHHHHHHHhCCEEEEECCCccccc-----------------------------
Confidence 6 7899999997544 37899999999999999999999998765321
Q ss_pred HHHHHHHHHhcCCCEEEEEccCHHHH---HHHHHHHHcCC-cEEecccc-c-------eE-------eeCcccccCcCcc
Q 009410 272 TTRAIRLAEFVNTPLYVVHVMSMDAM---EEIAKARKAGQ-RVIGEPVV-S-------GL-------VLDDSWLWHSDFV 332 (535)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~H~~~~~~~---~~~~~~~~~g~-~v~~~~~~-~-------~~-------~~~~~~~~~~~~~ 332 (535)
+.+. .++...|..+|+.|....... +.++.....++ +-+.+|+. + ++ +++++..++.-|.
T Consensus 262 ~~E~-t~aa~~gr~iH~~H~egaggghapd~~~~~~~~n~lp~stnpt~p~~~nt~~e~~~m~m~~h~l~~~~~~d~~fa 340 (573)
T PRK13206 262 FVED-TLAAIAGRSIHAYHTEGAGGGHAPDIITVASHPNVLPSSTNPTRPHTVNTLDEHLDMLMVCHHLNPAVPEDLAFA 340 (573)
T ss_pred hhhH-HHHHhcCCeEEEEeccCCCcCcccHHHHhcCCCCCcCCCCCCCCCCcccchhhhhCeEEeeccCCCCCcchhhhh
Confidence 1111 234456888999998764321 33333332231 11222221 1 10 1122211111111
Q ss_pred ccceeEEcCCCCCcccH-HHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHH------HhcC
Q 009410 333 TAAKYVMSPPIRASGHN-KALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTM------VESG 405 (535)
Q Consensus 333 ~~~~~~~~p~~r~~~~~-~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~------~~~~ 405 (535)
..|...++ .+-..+++.|+..+++||++......... .++|. +. ..+..+- ....
T Consensus 341 ---------~srir~~ti~ae~~l~d~G~~~~~~SDs~~~~~~~e~~-~~~~q----~a----~~~~~rr~~l~g~~~~~ 402 (573)
T PRK13206 341 ---------ESRIRPSTIAAEDVLHDMGAISMIGSDSQAMGRIGEVV-LRTWQ----TA----HVMKRRRGALPGDGRAD 402 (573)
T ss_pred ---------hhhccceeeccCchHhhCCcEEeccCCccccccccchh-hhHHH----HH----HHHHhccCCCCCCCccc
Confidence 01111111 12234788999999999976422111000 00111 11 1111000 0134
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEE
Q 009410 406 QISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVV 485 (535)
Q Consensus 406 ~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V 485 (535)
.++..++|++.|.|||+++|+++.+|+|++||.||||+||.+.+ ..++..||++|+++
T Consensus 403 ~~~v~~al~~yT~nPA~alG~~~~~GsLe~Gk~ADlVvld~d~f----------------------~~~~~~ti~~G~iv 460 (573)
T PRK13206 403 NNRARRYVAKYTICPAVAHGIDHEIGSVEVGKLADLVLWEPAFF----------------------GVRPHAVLKGGAIA 460 (573)
T ss_pred chhHHHHHHHHHHHHHHHhCCCcCCcccCCCCcCCEEEECcccc----------------------CCCccEEEECCEEE
Confidence 58999999999999999999988899999999999999996532 12678999999999
Q ss_pred EEC-Ceeccc
Q 009410 486 WEN-DELNVV 494 (535)
Q Consensus 486 ~~~-~~~~~~ 494 (535)
|.. |.....
T Consensus 461 ~~~~gd~nas 470 (573)
T PRK13206 461 WAAMGDANAS 470 (573)
T ss_pred EecCCChhhc
Confidence 987 555444
No 57
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=5.4e-33 Score=282.56 Aligned_cols=352 Identities=19% Similarity=0.208 Sum_probs=224.8
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCC----------CCCceEEecCCCEEeecccccccccccccCCC
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV----------GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS 121 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~----------~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~ 121 (535)
.++++|+|++|+++.+...++|+|+||||++|++.... ..+.++||++|++|+|||||+|+|+..+ +.
T Consensus 66 ~mDlVI~Na~Vvd~~gi~~adI~I~dGrI~~IG~~~~p~~~~~v~~~~~~~~eVIDa~G~iV~PG~ID~HvH~~~P--~~ 143 (568)
T PRK13207 66 AVDTVITNALILDHWGIVKADIGIKDGRIVAIGKAGNPDIQDGVDIIIGPGTEVIAGEGLIVTAGGIDTHIHFICP--QQ 143 (568)
T ss_pred cCCEEEECeEEECCCCeEEEEEEEECCEEEEEeCCCCccccccccccCCCCCeEEECCCCEEEeCeEECccCCccc--cH
Confidence 57899999999998666789999999999999974211 1367899999999999999999998654 21
Q ss_pred CchhhhHHHHHHHHhCCcEEEeccccCCC----C----ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHH
Q 009410 122 ETIDDFFSGQAAALAGGTTMHIDFVIPIN----G----SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (535)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (535)
.++++++||||++++...+. . .....++...+......++++++... ..+..+++.++.
T Consensus 144 ---------~~aALagGVTTVi~mg~gP~~gt~~~t~tpG~~~l~~~l~~a~~~pin~g~~g~g---~~~~~~~L~e~i- 210 (568)
T PRK13207 144 ---------IEEALASGVTTMIGGGTGPATGTNATTCTPGPWHIHRMLQAADAFPMNIGFLGKG---NASLPEALEEQI- 210 (568)
T ss_pred ---------HHHHHcCCCCEEEcCCcCCccCCcccccccchHHHHHHHHHhhcCCceEEEEcCC---CcccHHHHHHHH-
Confidence 47789999999999843221 1 11223444333333345566555421 223456777776
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHH
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 273 (535)
+.|+.++|++.++ ..+++.+.++++.|++++.++.+|+...........
T Consensus 211 ~aGA~gfKi~~d~----g~t~~~l~~aL~~A~~~gv~V~iHa~tlne~G~~e~--------------------------- 259 (568)
T PRK13207 211 EAGAIGLKLHEDW----GATPAAIDNCLSVADEYDVQVAIHTDTLNESGFVED--------------------------- 259 (568)
T ss_pred HcCCCEEeecCCC----CCCHHHHHHHHHHHHHhCCEEEEeCCCcccchHHHH---------------------------
Confidence 7899999998654 248899999999999999999999976543211111
Q ss_pred HHHHHHHhcCCCEEEEEccC---HHHHHHHHHHHHcCCcEE-ecccc-c-------eE-------eeCcccccCcCcccc
Q 009410 274 RAIRLAEFVNTPLYVVHVMS---MDAMEEIAKARKAGQRVI-GEPVV-S-------GL-------VLDDSWLWHSDFVTA 334 (535)
Q Consensus 274 ~~~~~~~~~~~~~~~~H~~~---~~~~~~~~~~~~~g~~v~-~~~~~-~-------~~-------~~~~~~~~~~~~~~~ 334 (535)
.+....+..+|..|... ....+.++.+...|+-.. .+|+. + ++ +++++..++.-|.
T Consensus 260 ---t~~a~~g~~iH~~H~egaggghapdii~~~~~~~v~p~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~d~~~a-- 334 (568)
T PRK13207 260 ---TIAAFKGRTIHTFHTEGAGGGHAPDIIKVAGEPNVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPSIPEDVAFA-- 334 (568)
T ss_pred ---HHHhcCCCEEEEEeecCCCcCCchHHHHHhhcCCCccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhh--
Confidence 12233466778888652 222367777777764322 22321 1 11 1222211111111
Q ss_pred ceeEEcCCCCCcccHHH-HHHHHhcCCeEEEeCCCCCCCh-hhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCC-----
Q 009410 335 AKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNS-TQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQI----- 407 (535)
Q Consensus 335 ~~~~~~p~~r~~~~~~~-~~~~l~~Gv~~~lgtD~~~~~~-~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~l----- 407 (535)
..|...++.+ -.-+++.|+..+++||+..... ... ++. +.+...... ...+.+
T Consensus 335 -------~srir~~t~~ae~~l~d~Ga~~~~~SD~p~~~~~~~~-----~~r----~~q~A~~r~----~~~G~~~~d~~ 394 (568)
T PRK13207 335 -------ESRIRRETIAAEDILHDLGAISMISSDSQAMGRVGEV-----IIR----TWQTAHKMK----VQRGPLPGDSG 394 (568)
T ss_pred -------hhhccceeecccchhhhCCCEEEecCCcccccccccc-----hhH----HHHHHHHHH----HccCCCCcccc
Confidence 0111111111 2237888999999999754311 010 111 112211111 111222
Q ss_pred --CHHHH---HHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECC
Q 009410 408 --SVTDY---VRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGG 482 (535)
Q Consensus 408 --s~~ea---l~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~G 482 (535)
+.+.+ |+++|.|||+++|+++.+|+|++||.||||||+.+.+ ..++..||++|
T Consensus 395 ~~~n~ri~~~l~~~T~npA~alG~~~~vGsIe~Gk~ADlVvld~d~f----------------------~~~~~~ti~~G 452 (568)
T PRK13207 395 RNDNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWKPAFF----------------------GVKPELVLKGG 452 (568)
T ss_pred cCccchHHHHHHHHhHHHHHHcCCCcCccccCCCCcCCEEEECchhc----------------------CCCceEEEECC
Confidence 22233 9999999999999988899999999999999996532 13678999999
Q ss_pred EEEEEC-CeecccCC
Q 009410 483 RVVWEN-DELNVVPG 496 (535)
Q Consensus 483 r~V~~~-~~~~~~~~ 496 (535)
+++|.. |.+.....
T Consensus 453 ~iv~~~~gd~~as~p 467 (568)
T PRK13207 453 MIAWAPMGDPNASIP 467 (568)
T ss_pred EEEEecCCCccccCC
Confidence 999998 87777653
No 58
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=6e-33 Score=279.91 Aligned_cols=344 Identities=18% Similarity=0.189 Sum_probs=222.0
Q ss_pred cccEEEEccEEEcCC-CceeeeEEEeCCEEEEeeCCCCC------------CCCceEEecCCCEEeeccccccccccccc
Q 009410 52 SSKILIKGGTVVNAH-HQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEF 118 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~-~~~~~~I~I~~G~I~~Vg~~~~~------------~~~~~vID~~G~~vlPGlID~H~H~~~~~ 118 (535)
..+++|+|++|+|+. +...++|.|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..+
T Consensus 67 ~~DlVItNa~IIDp~~Gi~kaDIgIkDGrIaaIG~~~npd~~~gv~p~~~~g~~teVIDaeG~IVtPG~ID~HVH~~~P- 145 (569)
T PRK13308 67 ALDFVLCNVTVIDPVLGIVKGDIGIRDGRIVGIGKAGNPDIMDGVDPRLVVGPGTDVRPAEGLIATPGAIDVHVHFDSA- 145 (569)
T ss_pred cCCEEEECeEEEcCCCCeEEeEEEEECCEEEEecCCCCccccccccccccCCCCCeEEECCCCEEEeCEEEeeeCCCCc-
Confidence 578999999999864 45688999999999999975311 1357899999999999999999998754
Q ss_pred CCCCchhhhHHHHHHHHhCCcEEEeccccCC----CCChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHH
Q 009410 119 MGSETIDDFFSGQAAALAGGTTMHIDFVIPI----NGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (535)
Q Consensus 119 ~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (535)
+. .++++++||||++++...+ .......++.+.+......++++++.... .....++.++. +
T Consensus 146 -g~---------~~aALagGVTTVi~gg~gPt~p~~t~g~~~i~~~l~aa~~~pvN~g~~gkG~---~s~~aeL~eli-~ 211 (569)
T PRK13308 146 -QL---------VDHALASGITTMLGGGLGPTVGIDSGGPFNTGRMLQAAEAWPVNFGFLGRGN---SSKPAALIEQV-E 211 (569)
T ss_pred -cH---------HHHHHcCCCcEEecCCcCCCCCCCCCCHHHHHHHHHHHhcCCccEEEEcCCc---ccCHHHHHHHH-H
Confidence 21 3778999999999863221 11344455555555445567777765322 12356777776 7
Q ss_pred cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHH
Q 009410 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTR 274 (535)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 274 (535)
.|+.++|++.++ ..+++.+.++++.|+++++++.+|+...++.....
T Consensus 212 aGA~GfKi~ed~----g~t~~~i~~aL~~A~~~dv~VaiHadtlne~g~~E----------------------------- 258 (569)
T PRK13308 212 AGACGLKIHEDW----GAMPAAIDTCLEVADEYDFQVQLHTDTLNESGFVE----------------------------- 258 (569)
T ss_pred CCCCEEeecCCC----CCCHHHHHHHHHHHHhcCCEEEEeCCCcCcchHHH-----------------------------
Confidence 899999987554 34889999999999999999999997754321111
Q ss_pred HHHHHHhcCCCEEEEEccCHH---HHHHHHHHHHcCC-cEEecccc-c-------eE-------eeCcccccCcCccccc
Q 009410 275 AIRLAEFVNTPLYVVHVMSMD---AMEEIAKARKAGQ-RVIGEPVV-S-------GL-------VLDDSWLWHSDFVTAA 335 (535)
Q Consensus 275 ~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~~~g~-~v~~~~~~-~-------~~-------~~~~~~~~~~~~~~~~ 335 (535)
. .++...|..+|+.|..... ..+.++.....++ +-+.+|+. + ++ +++++..++.-|.
T Consensus 259 ~-t~~a~~gr~iH~~H~egaggghapd~l~~~~~~n~lp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~afa--- 334 (569)
T PRK13308 259 D-TLAAIGGRTIHMYHTEGAGGGHAPDIIRVVGEPHCLPSSTNPTNPYTVNTFDEHLDMTMVCHHLNPDVPEDVAFA--- 334 (569)
T ss_pred H-HHHHhcCCeEEEEeccCCccCchhHHHHHhCCCCccCCCCCCCCCCccCchhhhcCeEEEecCCCCCCcchhhhh---
Confidence 1 2233447889999987643 2233443333332 11222221 1 11 1222221111111
Q ss_pred eeEEcCCCCCcccHHHHH-HHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh-cCCCCHHH--
Q 009410 336 KYVMSPPIRASGHNKALQ-AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE-SGQISVTD-- 411 (535)
Q Consensus 336 ~~~~~p~~r~~~~~~~~~-~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~-~~~ls~~e-- 411 (535)
..|...++.+.. -+++.|+...++||+..-..-.. .+. +.-....++.. .+.|+.++
T Consensus 335 ------~srir~~ti~ae~~l~d~g~~s~~~sds~~mgr~~e------------~i~-r~~q~a~~~~~~~g~l~~~~~~ 395 (569)
T PRK13308 335 ------ESRIRAQTIAAEDVLHDIGAISMLGSDSQGMGRIAE------------VIA-RTWQLASKMKDQRGPLPEDRGT 395 (569)
T ss_pred ------hhhccceeeccCchhhcCCcEEEEecchHHHhHHHH------------HHH-HHHHHHHHHhhcCCCCCccccc
Confidence 111111111112 26778999999999754322110 001 11111112222 45577765
Q ss_pred ---------HHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECC
Q 009410 412 ---------YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGG 482 (535)
Q Consensus 412 ---------al~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~G 482 (535)
.|+++|.|||+++|+++++|+|++||.||||+|+.+.+ ..++..||++|
T Consensus 396 ~~dn~rv~r~L~~~T~npA~alGi~~~vGsLe~Gk~ADLVv~d~d~f----------------------gv~p~~ti~~G 453 (569)
T PRK13308 396 FADNARIKRYIAKYTINPAITFGIDDHIGSLEPGKLADIVLWRPAFF----------------------GIKPELVIKGG 453 (569)
T ss_pred CCchhhhhHHHHHHhHHHHHHcCCCCCceeeCCCCcCCEEEECCccc----------------------CCCeeEEEECC
Confidence 79999999999999988899999999999999996532 12678999999
Q ss_pred EEEEEC
Q 009410 483 RVVWEN 488 (535)
Q Consensus 483 r~V~~~ 488 (535)
+++|..
T Consensus 454 ~iv~~~ 459 (569)
T PRK13308 454 FPAWAA 459 (569)
T ss_pred EEEEec
Confidence 999875
No 59
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=100.00 E-value=9.9e-33 Score=278.26 Aligned_cols=351 Identities=17% Similarity=0.181 Sum_probs=226.9
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCC------------CCCceEEecCCCEEeecccccccccccccC
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~------------~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 119 (535)
..+++|+|++|++..+...++|.|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..+
T Consensus 64 ~~DlVI~Na~IiD~~gi~~adI~IkdGrIvaIG~agnp~~~~~v~~~~~~g~~teVIDaeG~iV~PG~ID~HvH~~~P-- 141 (567)
T cd00375 64 VLDLVITNALIIDYTGIYKADIGIKDGRIVAIGKAGNPDIMDGVTPNMIVGPSTEVIAGEGKIVTAGGIDTHVHFICP-- 141 (567)
T ss_pred cCCEEEECeEEECCCCcEEEEEEEECCEEEEEecCCCccccccccccccCCCCCeEEECCCCEEeeceEECccCCCCc--
Confidence 56899999999997766789999999999999875311 1357899999999999999999998654
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCC-------CC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPI-------NG-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (535)
+. ..+++++||||+++++..+ .. .....++...+......++++++... ..+..+++.++
T Consensus 142 ~~---------~~aAlagGVTTvI~~G~gP~~gtnatp~t~g~~~l~~ml~aa~~~pin~g~~gkg---~~~~l~eL~e~ 209 (567)
T cd00375 142 QQ---------IEEALASGITTMIGGGTGPAAGTKATTCTPGPWNIKRMLQAADGLPVNIGFLGKG---NGSSPDALAEQ 209 (567)
T ss_pred cH---------HHHHHcCCCcEEEcCCcCcccccCCCCCCCCHHHHHHHHHHhhcCCceEEEEecC---ccccHHHHHHH
Confidence 21 4678999999999963221 11 23455555555555556777766432 22345667777
Q ss_pred HHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHH
Q 009410 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (535)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (535)
. +.|+.++|++.+| ..++..+.++++.|.+++.++.+|+.+..+..
T Consensus 210 ~-~aGA~GfK~~eD~----g~t~~~i~~aL~~A~~~dv~VaiHadtlne~g----------------------------- 255 (567)
T cd00375 210 I-EAGACGLKLHEDW----GATPAAIDTCLSVADEYDVQVAIHTDTLNESG----------------------------- 255 (567)
T ss_pred H-HcCCEEEEecCCC----CCCHHHHHHHHHHHHhhCCEEEEECCCCCcch-----------------------------
Confidence 6 7899999987554 25899999999999999999999997754321
Q ss_pred HHHHHHHHHhcCCCEEEEEccCHHHH---HHHHHHHHcCC-cEEecccc-c-------eE-------eeCcccccCcCcc
Q 009410 272 TTRAIRLAEFVNTPLYVVHVMSMDAM---EEIAKARKAGQ-RVIGEPVV-S-------GL-------VLDDSWLWHSDFV 332 (535)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~H~~~~~~~---~~~~~~~~~g~-~v~~~~~~-~-------~~-------~~~~~~~~~~~~~ 332 (535)
..+. .++...|..+|..|....... +.++.....++ +-+.+|+. + ++ +++++..++.-|.
T Consensus 256 ~~E~-t~aa~~gr~iH~~H~egaggghapdi~~~~~~~nvlp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~~fa 334 (567)
T cd00375 256 FVED-TIAAIKGRTIHTYHTEGAGGGHAPDIIKVAGHPNVLPSSTNPTRPFTVNTLDEHLDMLMVCHHLDPNIPEDVAFA 334 (567)
T ss_pred HHHH-HHHHhcCCeEEEEecCCCCcccchHHHHhcCCCCcccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhh
Confidence 1111 234566888999998764322 33333222221 11222221 1 11 1222211111111
Q ss_pred ccceeEEcCCCCCcccHHHHH-HHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCC-----
Q 009410 333 TAAKYVMSPPIRASGHNKALQ-AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQ----- 406 (535)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~~~-~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~----- 406 (535)
..|...++.+.. -+++.|+...++||+..-..-... . ...+.. ..++....|
T Consensus 335 ---------~srir~~ti~ae~~l~d~G~~s~~~sDs~~mgr~ge~-----~-------~r~~q~-a~k~~~~~g~~~~~ 392 (567)
T cd00375 335 ---------ESRIRAETIAAEDVLHDLGAISIMSSDSQAMGRVGEV-----I-------LRTWQT-AHKMKAQRGPLPED 392 (567)
T ss_pred ---------hhhccchhhccchhhhccCcEEEEccchhhcCcccee-----e-------echHHH-HHHHHHhcCCCCcc
Confidence 111111222222 366779999999997532211100 0 111111 112222222
Q ss_pred ---CCHHHH---HHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEE
Q 009410 407 ---ISVTDY---VRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIA 480 (535)
Q Consensus 407 ---ls~~ea---l~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~ 480 (535)
.+...+ |++.|.|||+++|+++++|+|++||.||||||+.+.+ ..++.+||+
T Consensus 393 ~~~~~n~r~~~~L~~~Tin~A~alG~~~~vGSLe~GK~ADlVv~d~~~f----------------------~~~p~~vi~ 450 (567)
T cd00375 393 SGDADNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWEPAFF----------------------GVKPEMVLK 450 (567)
T ss_pred cccCchHHHHHHHHHhhHHHHHHcCcccCceeeCCCCccCEEEEcCccc----------------------CCCeeEEEE
Confidence 455445 9999999999999999999999999999999997633 136789999
Q ss_pred CCEEEEEC-CeecccC
Q 009410 481 GGRVVWEN-DELNVVP 495 (535)
Q Consensus 481 ~Gr~V~~~-~~~~~~~ 495 (535)
+|+++|.. |.+....
T Consensus 451 ~G~iv~~~~gd~nasi 466 (567)
T cd00375 451 GGFIAYAQMGDPNASI 466 (567)
T ss_pred CCEEEEecCCCccccC
Confidence 99999998 7766654
No 60
>PRK07213 chlorohydrolase; Provisional
Probab=100.00 E-value=1.2e-32 Score=277.74 Aligned_cols=342 Identities=20% Similarity=0.272 Sum_probs=215.0
Q ss_pred EEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-C-----------
Q 009410 55 ILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G----------- 120 (535)
Q Consensus 55 ~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g----------- 120 (535)
++|+|++|+++.. ..+++|+|+||+|++|++.. ++.++||++|++| |||||+|+|+..... +
T Consensus 2 ~li~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~---~~~~~id~~g~~v-PGlvd~H~H~~~~~~rg~~~~~~l~~~~ 77 (375)
T PRK07213 2 LVYLNGNFLYGEDFEPKKGNLVIEDGIIKGFTNEV---HEGNVIDAKGLVI-PPLINAHTHIGDSSIKDIGIGKSLDELV 77 (375)
T ss_pred EEEEeeEEEeCCCCceeeeEEEEECCEEEEeccCC---CCCeEEeCCCCEe-cceeeeccccCchhhhcCCCCCCHHHHc
Confidence 6899999999765 36788999999999999752 3568999999999 999999999986421 0
Q ss_pred ------------CCchhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee-ecCChh
Q 009410 121 ------------SETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEV 183 (535)
Q Consensus 121 ------------~~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 183 (535)
..++++.+ ..+..++++||||++|+.... ...++...+..........+.... ....++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~~----~~~~~~~~~a~~~~~~r~~~~~~~~~~~~~~ 153 (375)
T PRK07213 78 KPPNGLKHKFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFREGG----IKGINLLKKASSDLPIKPIILGRPTEADENE 153 (375)
T ss_pred cCCCcchHHHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhhcC----hhHHHHHHHHHHcCCCceEEecCCCcccchh
Confidence 01112222 234456899999999974221 111222222111111111100000 011122
Q ss_pred hHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCCCCccccccc
Q 009410 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
..+.++...+. .+++ ..++...++.+.++++++.|+++|+++.+|+.+. ....... ...|..
T Consensus 154 ~~~~~~~~~~~--~~g~----~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~---~~~G~~-------- 216 (375)
T PRK07213 154 LKKEIREILKN--SDGI----GLSGANEYSDEELKFICKECKREKKIFSIHAAEHKGSVEYSL---EKYGMT-------- 216 (375)
T ss_pred hHHHHHHHHHh--cccc----cccccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhHHHHHH---HHcCCC--------
Confidence 33334433321 2222 2334456789999999999999999999999543 2222222 122321
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCC
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPP 342 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 342 (535)
.+..+.+.+- ..+ .+.|+...++ ++++++++.|+.++.||..+. ..+..+
T Consensus 217 --------~v~~~~~~G~--~~~-~i~H~~~~~~-~~i~~la~~g~~v~~~P~sn~-------------~l~~g~----- 266 (375)
T PRK07213 217 --------EIERLINLGF--KPD-FIVHATHPSN-DDLELLKENNIPVVVCPRANA-------------SFNVGL----- 266 (375)
T ss_pred --------hHHHHHhcCC--CCC-EEEECCCCCH-HHHHHHHHcCCcEEECCcchh-------------hhccCC-----
Confidence 1233333221 122 4799998887 889999999999999998632 121211
Q ss_pred CCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHH
Q 009410 343 IRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECAR 422 (535)
Q Consensus 343 ~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~ 422 (535)
.++++++++|+++++|||+.+.+.. ++ |. .+. .+....++++.++|+++|.|+|+
T Consensus 267 -------~~v~~l~~~Gv~v~lGTD~~~~~~~-~~-----~~--------e~~----~~~~~~~~~~~~~l~~aT~~gA~ 321 (375)
T PRK07213 267 -------PPLNEMLEKGILLGIGTDNFMANSP-SI-----FR--------EME----FIYKLYHIEPKEILKMATINGAK 321 (375)
T ss_pred -------ccHHHHHHCCCEEEEeeCCCCCchH-hH-----HH--------HHH----HHHHHhCcCHHHHHHHHHHHHHH
Confidence 2389999999999999997543211 11 11 121 12223469999999999999999
Q ss_pred HcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEE
Q 009410 423 IFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRV 484 (535)
Q Consensus 423 ~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~ 484 (535)
++|++ +.|+|++||.||||++|.+.+.. ..++.....+.+. ..+|..|||+||.
T Consensus 322 ~lg~~-~~G~l~~G~~ADlvv~d~~~~~p-----~~dp~~~lV~~~~--~~~v~~v~v~G~~ 375 (375)
T PRK07213 322 ILGLI-NVGLIEEGFKADFTFIKPTNIKF-----SKNPYASIITRCE--SGDIVNKILKGKL 375 (375)
T ss_pred HhCCC-CcCCcCCCCcccEEEEcCccccc-----cCCchHHHhhhcc--CCCceEEEECCcC
Confidence 99995 59999999999999999754321 1233333444432 3589999999984
No 61
>PRK13985 ureB urease subunit beta; Provisional
Probab=100.00 E-value=5.4e-33 Score=279.00 Aligned_cols=344 Identities=17% Similarity=0.211 Sum_probs=219.8
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCC------------CCCceEEecCCCEEeecccccccccccccC
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~------------~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 119 (535)
..+++|+|++|++..+...++|.|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..+
T Consensus 64 ~~DlVI~Na~IiD~~gi~kaDI~IkdGrIaaIG~~gn~~~~~~v~~~~~ig~~tevIDa~G~iV~PG~ID~HvH~~~P-- 141 (568)
T PRK13985 64 ELDLIITNALIIDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISP-- 141 (568)
T ss_pred cCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEECCCCEEEeCEEEeeCCCCCc--
Confidence 56899999999997666788999999999999975321 1357999999999999999999998654
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCC-----C---CChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPI-----N---GSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (535)
+. ...++++||||+++++..+ . ......++...+......++++++... ..+..+++.++
T Consensus 142 ~~---------~~~AlagGVTTvI~~G~gP~~~T~p~~~tpg~~~i~~ml~~a~~~pvn~gf~gkG---~~~~l~eL~el 209 (568)
T PRK13985 142 QQ---------IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLGKG---NSSNDASLADQ 209 (568)
T ss_pred cH---------HHHHhcCceEEEEccCcCCCCCCCCcCCCCcHHHHHHHHHHhhccCccEEEecCC---ccCCHHHHHHH
Confidence 21 2458999999999852211 1 012323444444444455677766422 11335667777
Q ss_pred HHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHH
Q 009410 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (535)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (535)
. +.|+.++|++.++ ..++..+.++++.|.+++.++.+|+.+.......
T Consensus 210 ~-~aGA~GfK~~ed~----g~t~~~I~~aL~vA~~~dv~V~iHtdtlne~g~~--------------------------- 257 (568)
T PRK13985 210 I-EAGAIGFKIHEDW----GTTPSAINHALDVADKYDVQVAIHTDTLNEAGCV--------------------------- 257 (568)
T ss_pred H-HcCCEEEEECCcc----CCCHHHHHHHHHHHHHcCCEEEEeCCCCCCchhh---------------------------
Confidence 6 7899999976443 3688999999999999999999999776532111
Q ss_pred HHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCc----EEecccc-ceE--------------eeCcccccCcCcc
Q 009410 272 TTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQR----VIGEPVV-SGL--------------VLDDSWLWHSDFV 332 (535)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~----v~~~~~~-~~~--------------~~~~~~~~~~~~~ 332 (535)
+. .++...|..+|+.|.........-+.++-.+.+ -+.+|+. +.. +++++..++.-|.
T Consensus 258 --E~-t~aa~~gr~iH~~H~egaggghapdi~~~~~~~nvlp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~ed~afa 334 (568)
T PRK13985 258 --ED-TMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQFA 334 (568)
T ss_pred --HH-HHHHhcCCeEEEEeccCCCccchhhHHHHcCCCCcccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhh
Confidence 11 234456788899998764322222233322311 1222221 110 1122211111111
Q ss_pred ccceeEEcCCCCCcccHHHHH-HHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh-c------
Q 009410 333 TAAKYVMSPPIRASGHNKALQ-AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE-S------ 404 (535)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~~~-~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~-~------ 404 (535)
..|...+..+.. -+++.|+...++||+..-..-.. .+. ++-....++.. .
T Consensus 335 ---------~srir~~tiaaed~l~d~G~~s~~~SDs~~mgr~ge------------~~~-r~~q~a~k~~~~~g~l~~~ 392 (568)
T PRK13985 335 ---------DSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGE------------VIT-RTWQTADKNKKEFGRLKEE 392 (568)
T ss_pred ---------hhhccccccccCchhhhCCcEEEEeccchhhCcccc------------eee-ehHHHHHHHHHhcCCCCCc
Confidence 111111111222 26778999999999753221110 000 11111112221 2
Q ss_pred ----CCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEE
Q 009410 405 ----GQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIA 480 (535)
Q Consensus 405 ----~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~ 480 (535)
..++.++||++.|.|||+++|+++++|+|++||.||||||+.+++ ..+++.||+
T Consensus 393 ~~~~dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~ADlVv~d~d~f----------------------~~~pe~vi~ 450 (568)
T PRK13985 393 KGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFF----------------------GVKPNMIIK 450 (568)
T ss_pred cccccccCHHHHHHHHhHHHHHHcCcccCceeECCCCccCEEEEcCccC----------------------CCChheEEE
Confidence 336677999999999999999999999999999999999997644 136789999
Q ss_pred CCEEEEEC
Q 009410 481 GGRVVWEN 488 (535)
Q Consensus 481 ~Gr~V~~~ 488 (535)
+|+++|..
T Consensus 451 ~G~iv~~~ 458 (568)
T PRK13985 451 GGFIALSQ 458 (568)
T ss_pred CCEEEEcc
Confidence 99999997
No 62
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=2.3e-32 Score=278.77 Aligned_cols=356 Identities=17% Similarity=0.182 Sum_probs=228.4
Q ss_pred cccEEEEccEEEcCC-CceeeeEEEeCCEEEEeeCCCCC------------CCCceEEecCCCEEeeccccccccccccc
Q 009410 52 SSKILIKGGTVVNAH-HQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEF 118 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~-~~~~~~I~I~~G~I~~Vg~~~~~------------~~~~~vID~~G~~vlPGlID~H~H~~~~~ 118 (535)
..+++|+|++|+|+. +...++|.|+||||++|++.... ..+.++||++|++|+|||||+|+|+..+
T Consensus 67 ~~DlVI~Ng~ViD~~~gi~kaDI~IkdGrI~aIG~~~~p~~~~~v~~~~~~g~~tevIDa~G~iVtPG~ID~HvH~~~P- 145 (572)
T PRK13309 67 VLDLVITNVTIVDARLGVIKADVGIRDGKIVGIGKSGNPSTMDGVTQGMVVGVSTDAISGEHLILTAAGIDTHIHLISP- 145 (572)
T ss_pred cCCEEEECeEEEcCCCCEEEEEEEEECCEEEEecCCCccccccccccccccCCCceEEECCCCEEEeCEEEeecccCCc-
Confidence 568999999999964 45788999999999999974321 1247899999999999999999998765
Q ss_pred CCCCchhhhHHHHHHHHhCCcEEEeccccCC-------C-CChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHH
Q 009410 119 MGSETIDDFFSGQAAALAGGTTMHIDFVIPI-------N-GSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEV 190 (535)
Q Consensus 119 ~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (535)
+. ..+++.+||||+++++..+ . ......++...+......++++++... .. ....++.+
T Consensus 146 -~~---------~~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~~a~~~pvn~g~~gkg--~~-~~~~~l~e 212 (572)
T PRK13309 146 -QQ---------AYHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLRSIEGLPVNVGILGKG--NS-YGRGPLLE 212 (572)
T ss_pred -ch---------HHHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHhccCCcCEEEEcCC--CC-CCHHHHHH
Confidence 21 3578999999999753111 1 123445555555555556777666422 11 22355666
Q ss_pred HHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHH
Q 009410 191 MVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGE 270 (535)
Q Consensus 191 ~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 270 (535)
+. +.|+.++|++.++ ..+++.+.++++.|++++.++.+|+.+..+..
T Consensus 213 l~-~aGa~gfk~~~d~----g~t~~~L~~aLe~A~~~gv~VaiH~d~lnE~g---------------------------- 259 (572)
T PRK13309 213 QA-IAGVAGYKVHEDW----GATAAALRHALRVADEVDIQVAVHTDSLNECG---------------------------- 259 (572)
T ss_pred HH-hcCcEEEEecCcC----CcCHHHHHHHHHHHHhcCCEEEEeCCccccch----------------------------
Confidence 66 7899999987554 24889999999999999999999986654321
Q ss_pred HHHHHHHHHHhcCCCEEEEEccCHH---HHHHHHHHHHcCC-cEEecccc-c-------eE-------eeCcccccCcCc
Q 009410 271 ATTRAIRLAEFVNTPLYVVHVMSMD---AMEEIAKARKAGQ-RVIGEPVV-S-------GL-------VLDDSWLWHSDF 331 (535)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~~~g~-~v~~~~~~-~-------~~-------~~~~~~~~~~~~ 331 (535)
..+.. +++..+.++|..|..... .-+.++.....++ +-+.+|+. + ++ +++++..++..|
T Consensus 260 -~vE~~-~aa~~grpih~~H~~Gaggghapd~~~~~~~~~~~~~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~D~~~ 337 (572)
T PRK13309 260 -YVEDT-IDAFEGRTIHTFHTEGAGGGHAPDIIKVASQTNVLPSSTNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVAF 337 (572)
T ss_pred -hHHHH-HHHhCCCceeeeeccCcccCCchhHHHhcCCCCcccCCCCCCCCCcccchHhhhchhhhhccCCCCCCCChhH
Confidence 11111 344556777887775532 2123332222221 11222221 1 11 223332222222
Q ss_pred cccceeEEcCCCCCc-ccHHHHHHHHhcCCeEEEeCCCCCCCh-hhhhcCCCCcccCcchHHHHHHHHHH--H----HHh
Q 009410 332 VTAAKYVMSPPIRAS-GHNKALQAALATGILQLVGTDHCAFNS-TQKAFGIDDFRKIPNGIEERMHLVWD--T----MVE 403 (535)
Q Consensus 332 ~~~~~~~~~p~~r~~-~~~~~~~~~l~~Gv~~~lgtD~~~~~~-~~~~~~~~~~~~~~~g~~~~l~~~~~--~----~~~ 403 (535)
.. .|.. ....+.+.++++|+.++++||++.... .. +++. +++........ . ...
T Consensus 338 a~---------srig~e~~~a~~~l~daGa~~~~gSD~pv~gr~~~-----~p~~----~iq~Av~rk~~~g~l~~~~~~ 399 (572)
T PRK13309 338 AE---------SRVRPETIAAENVLHDMGVISMFSSDSQAMGRVGE-----NWLR----AIQTADAMKAARGKLPEDAAG 399 (572)
T ss_pred HH---------HhhCchhhcchhHHHhCCCEEEEcCCCCcccCCcc-----cHHH----HHHHHHHHHhccCCCCccCCC
Confidence 11 0111 112557789999999999999653211 00 0111 22222111000 0 001
Q ss_pred cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCE
Q 009410 404 SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGR 483 (535)
Q Consensus 404 ~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr 483 (535)
...++..++|++.|.|||+++|+++++|+|++||.|||||||.+.+ ..++.+||++|+
T Consensus 400 ~~~~~v~~aL~~yT~n~A~a~g~e~~~GsLe~Gk~ADlvvld~d~f----------------------~~~~~~vi~~G~ 457 (572)
T PRK13309 400 NDNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMADLVLWEPRFF----------------------GAKPKMVIKGGM 457 (572)
T ss_pred cccccHHHHHHHHhHHHHHHcCcccCccccCCCCcCCEEEEchhhc----------------------CCCccEEEECCE
Confidence 3347788999999999999999999999999999999999997633 136789999999
Q ss_pred EEEEC-CeecccCC
Q 009410 484 VVWEN-DELNVVPG 496 (535)
Q Consensus 484 ~V~~~-~~~~~~~~ 496 (535)
+||.. |.+.....
T Consensus 458 iv~~~~gd~~as~p 471 (572)
T PRK13309 458 INWAAMGDPNASLP 471 (572)
T ss_pred EEEecCCCccccCC
Confidence 99998 87777643
No 63
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=100.00 E-value=7.4e-33 Score=285.66 Aligned_cols=369 Identities=16% Similarity=0.102 Sum_probs=228.9
Q ss_pred EEEEccEEEcCCCceeeeEEEe-CCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-CC-----------
Q 009410 55 ILIKGGTVVNAHHQQIADVYVE-DGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS----------- 121 (535)
Q Consensus 55 ~vi~n~~vi~~~~~~~~~I~I~-~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~----------- 121 (535)
+.++|+++-++ ..++++|+|+ ||+|++||+....+++ .+..|++|+|||||+|+|+++.+. |.
T Consensus 4 ~~~~~~~~~~~-~~~~~~i~I~~~g~I~~vg~~~~~~~~---~~~~g~lvlPGfVn~H~H~~~~~~rg~~~~~~~~~~~l 79 (455)
T TIGR02022 4 YWAERALLPDG-WAEGVRIAVAADGRILAIETGVPAAPG---AERLSGPLLPGLANLHSHAFQRAMAGLAEVAGSGGDSF 79 (455)
T ss_pred hhHHhccCCCc-cccCceEEEecCCEEEEecCCCCcccc---cccCCCEEccCCcccCcchhhHhhcCCcccccCCCCCH
Confidence 45667766322 2357899999 9999999986543222 234689999999999999977511 10
Q ss_pred -------------CchhhhH----HHHHHHHhCCcEEEeccccCCCC-----------ChHHHHHHHHHHhcccccccce
Q 009410 122 -------------ETIDDFF----SGQAAALAGGTTMHIDFVIPING-----------SLTAGFEAYEKKAKNSCMDYGF 173 (535)
Q Consensus 122 -------------~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 173 (535)
.++++++ ....+++++||||+.|+...... .....++...+.+.+..+...+
T Consensus 80 ~~w~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~G~R~~~~~~~ 159 (455)
T TIGR02022 80 WTWRELMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFHYLHHAPDGTPYADPAEMAERIAAAAADAGIGLTLLPVF 159 (455)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeeeeecccCCCccccchhhhHHHHHHHHHHhCCeEEeeeee
Confidence 1122222 22344688999999997432110 1234555566655553332111
Q ss_pred ee-----eeecC---------ChhhHHHHHHHHHH-cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcC-C
Q 009410 174 HM-----AITKW---------DEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-N 237 (535)
Q Consensus 174 ~~-----~~~~~---------~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~-~ 237 (535)
+. +.... .++..+....+.+. .+...+.+.+.+++...++++.++++.+ ++++|+++++|+. +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~-a~~~g~~v~~H~~e~ 238 (455)
T TIGR02022 160 YAHSGFGGAAPNPGQRRFIHDVERFARLVEVLRRELAAQPAAVLGLAPHSLRAVTPEQLAAVLQ-ASDRQAPVHIHVAEQ 238 (455)
T ss_pred eecCCCCCCCCcccchhhccCHHHHHHHHHHHHHHhccCCceEEEEecCCCCcCCHHHHHHHHH-HHhCCCceEEEECCC
Confidence 11 00100 01122222222211 1223455555666777889999999999 7899999999994 3
Q ss_pred hhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccc
Q 009410 238 GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVS 317 (535)
Q Consensus 238 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~ 317 (535)
..+..... ...|... ++.+.+ ....+.++.+.|+...++ ++++.+++.|+.++.||..+
T Consensus 239 ~~e~~~~~---~~~G~~~----------------v~~l~~-~g~l~~~~~~~H~~~l~~-~d~~~la~~g~~v~~~P~sn 297 (455)
T TIGR02022 239 QKEVDDCL---AWSGRRP----------------VEWLLD-HGPVDARWCLVHATHLTD-EETALLARSGAVAGLCPTTE 297 (455)
T ss_pred hHHHHHHH---HHhCCCH----------------HHHHHH-cCCCCCCEEEEEeecCCH-HHHHHHHHcCCeEEEChhhh
Confidence 33322222 2223221 111222 224567888999998887 88999999999999999852
Q ss_pred eEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHH
Q 009410 318 GLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLV 397 (535)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~ 397 (535)
+..+..+ .++++++++|+++++|||+.... + .|. ++.+...
T Consensus 298 -------------~~lg~g~------------~pi~~l~~~Gv~v~lGTD~~~~~-d-------~~~------~m~~a~~ 338 (455)
T TIGR02022 298 -------------ANLGDGI------------FPAVDFVAAGGRFGIGSDSHVVI-D-------VAE------ELRQLEY 338 (455)
T ss_pred -------------ccccCCC------------CCHHHHHHCCCeEEEECCCCCCC-C-------HHH------HHHHHHH
Confidence 2222221 22899999999999999964321 1 122 2333333
Q ss_pred HHHHHh---------cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeec--CCccccCCCCCC
Q 009410 398 WDTMVE---------SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITA--RSHHSRLDTNVY 466 (535)
Q Consensus 398 ~~~~~~---------~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~--~~~~~~~~~~p~ 466 (535)
.++... ...++.+++|+++|.|+|+++|+ + .|+|++||+|||||+|.+.+...+. +++ .....|
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~-~-~GsLe~Gk~ADlvvld~~~~~~~~~~~~~~---~~~lv~ 413 (455)
T TIGR02022 339 GQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGL-A-TGGLRAGARADFLTLDGDHPYLAGALGDSL---LDRWLF 413 (455)
T ss_pred HHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCC-C-CCccCCCCCcCEEEEeCCCcccCCCCchhH---HHHHhh
Confidence 333221 12467889999999999999999 3 8999999999999999875543321 111 112233
Q ss_pred CCeeEeeEEEEEEECCEEEEECCeecccC
Q 009410 467 EGRRVKGKVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 467 ~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
.+. ..+|..||++|++|+++|+++..+
T Consensus 414 ~~~--~~~V~~v~V~G~~v~~~g~~~~~~ 440 (455)
T TIGR02022 414 AGG--GAAVRDVWVGGRWVVRDGRHALRE 440 (455)
T ss_pred cCC--CCCccEEEECCEEEEECCccccHH
Confidence 322 358999999999999999997543
No 64
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=100.00 E-value=7.2e-33 Score=286.60 Aligned_cols=366 Identities=14% Similarity=0.079 Sum_probs=227.1
Q ss_pred cEEEEccEEEcCCCceeeeEEEeC-CEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-CC----------
Q 009410 54 KILIKGGTVVNAHHQQIADVYVED-GIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS---------- 121 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~~~~~I~I~~-G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~---------- 121 (535)
.++++++.+.++ ..++++|+|+| |+|++||+... ++ .++..|++|+|||||+|+|+++.+. |.
T Consensus 4 ~~~~~~~~~~~~-~~~~~~v~i~~~grI~~vg~~~~-~~---~~~~~g~~vlPGlVn~H~H~~~~~~rg~~~~~~~~~~~ 78 (456)
T PRK09229 4 TLFAERALLPDG-WARNVRLTVDADGRIAAVEPGAA-PA---GAERLAGPVLPGMPNLHSHAFQRAMAGLTEVRGPPQDS 78 (456)
T ss_pred hHHHHHhhCCCc-cccCcEEEEecCCeEEEecCCCC-Cc---cccccCcEEccCcccccccHhhHhhcCcccccCCCCCC
Confidence 455666666333 23678999999 99999998543 22 2456899999999999999875411 10
Q ss_pred --------------CchhhhH----HHHHHHHhCCcEEEeccccCCCC-----------ChHHHHHHHHHHhcccccccc
Q 009410 122 --------------ETIDDFF----SGQAAALAGGTTMHIDFVIPING-----------SLTAGFEAYEKKAKNSCMDYG 172 (535)
Q Consensus 122 --------------~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 172 (535)
.++++.+ .....++.+||||+.|+...... .....++...+.+-+..+...
T Consensus 79 l~~w~~~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~GiR~~~~~~ 158 (456)
T PRK09229 79 FWSWRELMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFHYLHHDPDGTPYADPAEMALRIVAAARAAGIGLTLLPV 158 (456)
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeeeeeccCCCCCccCChHHHHHHHHHHHHHcCCEEEecee
Confidence 0111111 12344688999999987532110 123445555555544322211
Q ss_pred eee--e---eec---------CChhhHHHHHHHHHH-cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 173 FHM--A---ITK---------WDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 173 ~~~--~---~~~---------~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
.+. + ... ...+..+..+.+.+. .+...+.+.+.+++...++++.++++++.| ++|+++.+|+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~~A-~~g~~i~~H~~e 237 (456)
T PRK09229 159 LYAHSGFGGQPPNPGQRRFINDPDGFLRLLEALRRALAALPGARLGLAPHSLRAVTPDQLAAVLALA-APDGPVHIHIAE 237 (456)
T ss_pred eeecCCCCCCCCchhhcccccCHHHHHHHHHHHHHhhcCCCceEEEEeCCCCCCCCHHHHHHHHHHh-cCCCceEEEeCC
Confidence 111 0 000 001122222233221 223456666677777788999999999999 999999999943
Q ss_pred -hhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEecccc
Q 009410 238 -GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (535)
Q Consensus 238 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~ 316 (535)
..+.....+ ..|... ++. +.-....+.++.+.|+...++ ++++++++.|+.++.||..
T Consensus 238 ~~~e~~~~~~---~~g~~~----------------~~~-l~~~g~l~~~~~l~H~~~l~~-~d~~~la~~g~~v~~~P~s 296 (456)
T PRK09229 238 QTKEVDDCLA---WSGARP----------------VEW-LLDHAPVDARWCLVHATHLTD-AETARLARSGAVAGLCPTT 296 (456)
T ss_pred CHHHHHHHHH---HcCCCH----------------HHH-HHHcCCCCCCeEEEeeccCCH-HHHHHHHHcCCeEEECchh
Confidence 333322222 223211 111 111234467888999999887 8899999999999999874
Q ss_pred ceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHH
Q 009410 317 SGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHL 396 (535)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~ 396 (535)
++..+... .++++++++|+++++|||+... .+ +|. ++++..
T Consensus 297 -------------n~~lg~g~------------~p~~~l~~~Gv~v~lGtD~~~~-~d-------~~~------~~~~~~ 337 (456)
T PRK09229 297 -------------EANLGDGI------------FPAVDYLAAGGRFGIGSDSHVS-ID-------LVE------ELRLLE 337 (456)
T ss_pred -------------hhhhcCCC------------CCHHHHHHCCCeEEEecCCCCC-CC-------HHH------HHHHHH
Confidence 22222221 2289999999999999996432 11 122 223322
Q ss_pred HHHHHHh---------cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeee--cCCccccCCCCC
Q 009410 397 VWDTMVE---------SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEIT--ARSHHSRLDTNV 465 (535)
Q Consensus 397 ~~~~~~~---------~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~--~~~~~~~~~~~p 465 (535)
..++... ...++..++|+++|.|+|+++|+ ..|+|++||+|||||+|.+.+...+ .+++.. ...
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~--~~GsLe~Gk~ADlvvld~~~~~~~~~~~~~~~~---~lv 412 (456)
T PRK09229 338 YGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGR--AIGGLAVGARADLVVLDLDHPALAGREGDALLD---RWV 412 (456)
T ss_pred HHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCC--CcCCcCCCCccCEEEEeCCCccccCCChhhHHH---HHh
Confidence 2222221 13568899999999999999998 5899999999999999987643221 112211 122
Q ss_pred CCCeeEeeEEEEEEECCEEEEECCeec
Q 009410 466 YEGRRVKGKVEVTIAGGRVVWENDELN 492 (535)
Q Consensus 466 ~~~~~~~~~v~~v~~~Gr~V~~~~~~~ 492 (535)
|.+. ..+|..||++||+||++|+++
T Consensus 413 ~~~~--~~~V~~v~V~G~~v~~~g~~~ 437 (456)
T PRK09229 413 FAGG--DAAVRDVWVAGRWVVRDGRHR 437 (456)
T ss_pred hcCC--CCCeeEEEECCEEEEECCccC
Confidence 2221 358999999999999999854
No 65
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=100.00 E-value=9.8e-33 Score=274.74 Aligned_cols=330 Identities=21% Similarity=0.285 Sum_probs=240.2
Q ss_pred cccEEEEccEEEcCCC--ceeeeEEEeCCEEEEe-eCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhH
Q 009410 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAV-QPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~V-g~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~ 128 (535)
.++++++|++++|.-+ +..++|+|.+|+|+.| ++.. .++.++||+.|+||.|||||.|.|+..+ ..++..|
T Consensus 23 ~adlv~~ng~ivdv~~gei~~~dIaI~~grI~~v~~~~~--~e~~~~iDa~g~yivPGfID~H~HIESS---m~tP~~F- 96 (584)
T COG1001 23 KADLVLKNGRIVDVVTGEIYKGDIAIAGGRIVGVIGEYR--AEATEVIDAAGRYIVPGFIDAHLHIESS---MLTPSEF- 96 (584)
T ss_pred CCCEEEECCEEEEeeeccEEeeeEEEECCEEEEeecCcC--cccceeecCCCCEeccceeecceecccc---ccCHHHH-
Confidence 6899999999999765 3588999999999995 4433 4578999999999999999999999886 5678777
Q ss_pred HHHHHHHhCCcEEEe-ccccCCCCChHHHHHHHHHHhcccccccceeeee----ecCC----hhhHHHHHHHHHHcCCCE
Q 009410 129 SGQAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI----TKWD----EVVSDEMEVMVKEKGINS 199 (535)
Q Consensus 129 ~~~~~~l~~GvTtv~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~g~~~ 199 (535)
++..+.+|+||++ |.+...+....+.++.+.......++++.++.+. +..+ .-..+.++++.++..+-+
T Consensus 97 --A~~Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~~pl~~~~~~pScVPat~~Et~Ga~l~a~~i~e~~~~p~Vig 174 (584)
T COG1001 97 --ARAVLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKETPLKVYVMLPSCVPATPFETSGAELTAEDIKELLEHPEVIG 174 (584)
T ss_pred --HHHhhccCceEEeeCcHHHHhhccHHHHHHHHHHHhhCCeEEEEecccCccCCccccCCceecHHHHHHHhhCCCccc
Confidence 7788999999997 6666666677888888888877766666554422 1111 113566777777778888
Q ss_pred EEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHH
Q 009410 200 FKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (535)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (535)
+..++++++... .++.+...+++++++|+++..|++... ...+..+...|+.
T Consensus 175 l~E~Mn~pgVi~-~D~~~l~kl~a~~~~~k~VdGHapgl~--g~~Ln~Y~aaGi~------------------------- 226 (584)
T COG1001 175 LGEMMNFPGVIE-GDPDMLAKLEAARKAGKPVDGHAPGLS--GKELNAYIAAGIS------------------------- 226 (584)
T ss_pred hhhhcCCchhcc-CCHHHHHHHHHHHHcCCeecccCCCCC--hHHHHHHHhcCCC-------------------------
Confidence 888888887666 456677788899999999999998765 3344555555554
Q ss_pred HhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHH-Hhc
Q 009410 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAA-LAT 358 (535)
Q Consensus 280 ~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~-l~~ 358 (535)
..|.....+ +.+++++ .|+.+...- |+..+ +...+..+ -+.
T Consensus 227 --------tDHE~~t~E-Ea~~klr-~Gm~i~iRe-------------------GS~a~---------dl~~l~~~i~e~ 268 (584)
T COG1001 227 --------TDHESTTAE-EALEKLR-LGMKIMIRE-------------------GSAAK---------DLAALLPAITEL 268 (584)
T ss_pred --------cCcccCCHH-HHHHHHh-CCcEEEEEc-------------------Cchhh---------hHHHHHHHHhhc
Confidence 245544443 6677664 677765431 11111 11223333 333
Q ss_pred C-CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCC
Q 009410 359 G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGS 437 (535)
Q Consensus 359 G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk 437 (535)
| -+++++||......... +.++..+++.+++++ +++.+|++|+|+|||+.+|+++ +|.|+||+
T Consensus 269 ~~~~~~lcTDD~~p~dl~~--------------eGhld~~vR~Ai~~G-v~p~~a~qmAtiN~A~~~gl~~-~G~iAPG~ 332 (584)
T COG1001 269 GSRRVMLCTDDRHPDDLLE--------------EGHLDRLVRRAIEEG-VDPLDAYQMATINPAEHYGLDD-LGLIAPGR 332 (584)
T ss_pred CCceEEEECCCCChhHhhh--------------cCCHHHHHHHHHHcC-CCHHHHHHHHhcCHHHHcCCcc-cccccCCc
Confidence 4 46999999754332111 346777777777665 9999999999999999999954 99999999
Q ss_pred CccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeeccc
Q 009410 438 DADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 494 (535)
Q Consensus 438 ~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~ 494 (535)
.||||+++.- . .-+|..|+++|++|.++|+.+..
T Consensus 333 ~ADlvi~~DL-~----------------------~~~v~~V~~~G~~v~~~g~~l~~ 366 (584)
T COG1001 333 RADLVILEDL-R----------------------NFKVTSVLIKGRVVAEDGKALIK 366 (584)
T ss_pred cccEEEEccc-c----------------------cCceeEEEECCEEEecCCceecc
Confidence 9999999821 1 12799999999999999985444
No 66
>PRK08418 chlorohydrolase; Provisional
Probab=100.00 E-value=7.1e-33 Score=281.52 Aligned_cols=368 Identities=15% Similarity=0.081 Sum_probs=222.6
Q ss_pred EEEEccEEEcCCC----ceeeeEEEeCCEEEEeeCCCCC---CCCceEEecCCCEEeecccccccccccccC-CCC----
Q 009410 55 ILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GSE---- 122 (535)
Q Consensus 55 ~vi~n~~vi~~~~----~~~~~I~I~~G~I~~Vg~~~~~---~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~~---- 122 (535)
.+|+|++|++++. .++++|+|+ |+|++|++.... .++.++||++|++|+|||||+|+|+.+... +..
T Consensus 2 ~~i~~~~v~t~~~~~~~~~~~~v~v~-~~I~~ig~~~~~~~~~~~~~vid~~g~~v~PG~Vn~H~H~~~~~~rg~~~~~~ 80 (408)
T PRK08418 2 KIIGASYIFTCDENFEILEDGAVVFD-DKILEIGDYENLKKKYPNAKIQFFKNSVLLPAFINPHTHLEFSANKTTLDYGD 80 (408)
T ss_pred EEEEccEEEecCCCCceeeccEEEEC-CEEEEecCHHHHHhhCCCCcEEecCCcEEccCccccccchhhhhhccccCCCc
Confidence 5789999998763 268899999 999999974221 224569999999999999999999975521 110
Q ss_pred ---------------chhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChh
Q 009410 123 ---------------TIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEV 183 (535)
Q Consensus 123 ---------------~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (535)
.++..+ ....+++++||||+.|+.... ...+...+.+.+..+.............+
T Consensus 81 ~~~wl~~~~~~~~~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~~~~-----~~~~a~~~~GiR~~~~~~~~~~~~~~~~~ 155 (408)
T PRK08418 81 FIPWLGSVINHREDLLEKCKGALIQQAINEMLKSGVGTIGAISSFG-----IDLEICAKSPLRVVFFNEILGSNASAVDE 155 (408)
T ss_pred hHHHHHHHhhhhhhcCHHHHHHHHHHHHHHHHhcCceEEEEeecch-----hhHHHHHhcCCeEEEEeeeeCCCccchhh
Confidence 011111 123456899999999885321 12344445554433211111100000011
Q ss_pred hHHHHHHHHHH---cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC-hhhHHHHHHHHHHcCCC-C-cc
Q 009410 184 VSDEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GDAVFEGQKRMIELGIT-G-PE 257 (535)
Q Consensus 184 ~~~~~~~~~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~-~~~~~~~~~~~~~~g~~-~-~~ 257 (535)
..+.+....+. ...+.++..+.+++...++++.++++.+.|+++|+++++|+.. ..+.....+. .|.. . ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~aph~~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~E~~~~~~~---~G~~~~~~~ 232 (408)
T PRK08418 156 LYQDFLARFEESKKFKSKKFIPAIAIHSPYSVHPILAKKALQLAKKENLLVSTHFLESKAEREWLEES---KGWFKKFFE 232 (408)
T ss_pred hHHHHHHHHHhhhcccCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCHHHHHHHHhc---cCchhhhhh
Confidence 11111111111 1234577777888888999999999999999999999999954 4333322221 1210 0 00
Q ss_pred cccccCChhhHHHHHHHHHHHHHhc-CCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccce
Q 009410 258 GHALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336 (535)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (535)
.+....++ ..+.++..... +.++.+.|+...++ ++++++++.|+.|+.||.+ ++..+..
T Consensus 233 ~~~~~~~~------~~~pv~~l~~~g~~~~~~~H~~~~~~-~di~~la~~g~~v~~cP~s-------------n~~lg~g 292 (408)
T PRK08418 233 KFLKEPKP------LYTPKEFLELFKGLRTLFTHCVYASE-EELEKIKSKNASITHCPFS-------------NRLLSNK 292 (408)
T ss_pred hhcccccc------cCCHHHHHHHhCCCCeEEEecccCCH-HHHHHHHHcCCcEEECHhH-------------HHHhcCC
Confidence 00000000 00111222222 45788999999887 8999999999999999875 2223332
Q ss_pred eEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 009410 337 YVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLT 416 (535)
Q Consensus 337 ~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~ 416 (535)
. .++++++++|+++++|||+...+.... .|. ++++....++.. ....+++++|+++
T Consensus 293 ~------------~p~~~~~~~Gi~v~lGtD~~~~~~~~~-----~~~------em~~~~~~~~~~-~~~~~~~~~l~~a 348 (408)
T PRK08418 293 A------------LDLEKAKKAGINYSIATDGLSSNISLS-----LLD------ELRAALLTHANM-PLLELAKILLLSA 348 (408)
T ss_pred C------------ccHHHHHhCCCeEEEeCCCCCCCCCcC-----HHH------HHHHHHHHhccC-CccccHHHHHHHH
Confidence 2 228899999999999999654332221 122 223222221100 1113468999999
Q ss_pred hHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEE
Q 009410 417 STECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVV 485 (535)
Q Consensus 417 T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V 485 (535)
|.|+|+++|++ .|+|++||.||||++|.+.+. .+. .+.|+.......+|+.||++|++|
T Consensus 349 T~~gA~alg~~--~G~l~~G~~ADlv~~d~~~~~-~~~-------~~~~~~~~~~~~~v~~v~v~G~~v 407 (408)
T PRK08418 349 TRYGAKALGLN--NGEIKEGKDADLSVFELPEEC-TKK-------EQLPLQFILHAKEVKKLFIGGKEV 407 (408)
T ss_pred HHHHHHHhCCC--CccccCCCccCEEEEeCCCCC-CCh-------hHhHHHHHhccCccceEEECCEEc
Confidence 99999999994 699999999999999976321 110 111222111134899999999987
No 67
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=100.00 E-value=1.5e-31 Score=267.38 Aligned_cols=356 Identities=17% Similarity=0.203 Sum_probs=218.9
Q ss_pred EEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCC---CCce-EEecCCCEEeeccccccccccccc-CCCCchhhhHH
Q 009410 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG---DDVK-VLDATGKFVMPGGIDPHTHLAMEF-MGSETIDDFFS 129 (535)
Q Consensus 55 ~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~---~~~~-vID~~G~~vlPGlID~H~H~~~~~-~g~~~~~~~~~ 129 (535)
++|+|++|++++.....+|+|+||||++|+++.+.+ .+.+ ++|++|++|+|||||+|+|+.... .+.......+.
T Consensus 2 ~li~n~~v~~~~~~~~~dvlI~~gkI~~Ig~~~~~~~~~~~~~~i~d~~G~~v~PGlID~HvH~~~gg~~~~~~~~~~e~ 81 (389)
T TIGR01975 2 TLLKGAEVYAPEYIGKKDILIANDKIIAIADEIPSTKDFVPNCVVVGLEGMIAVPGFIDQHVHIIGGGGEGGPTTRTPEL 81 (389)
T ss_pred EEEECcEEEcCCcCcceeEEEECCEEEEEcCCccccccCCCCeEEECCCCCEEccCEeehhhccccccccCCCccCCHHH
Confidence 689999999987667789999999999999875432 1234 556699999999999999987641 11110111223
Q ss_pred HHHHHHhCCcEEEeccccCCCC-----ChHHHHHHHHHHhccccccccee-eeeecCChhhHHHHHHHHHHcCCCEEE-E
Q 009410 130 GQAAALAGGTTMHIDFVIPING-----SLTAGFEAYEKKAKNSCMDYGFH-MAITKWDEVVSDEMEVMVKEKGINSFK-F 202 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~ik-~ 202 (535)
.+..++++||||++|+.+.... ...+..+.....+-+.+...+.+ .+....++.....+.. -....++| +
T Consensus 82 ~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~Gir~~~~~g~~~~p~~t~t~~~~~d~~~---~d~iiG~~~i 158 (389)
T TIGR01975 82 TLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEGISCYMLTGAYHVPSRTITGSVESDLLL---IDKVIGVGEI 158 (389)
T ss_pred HHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhCCEEEEEcccccCCCcccccchhhheee---ehhhcccceE
Confidence 5777899999999998654322 23344555555554433222221 1222223323333322 12344553 6
Q ss_pred EeecCCCCcCCHHHHHHHHHHHHhcC----Ce--EEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHH
Q 009410 203 FMAYKGSFMINDELLIEGFKRCKSLG----AL--AMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAI 276 (535)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g----~~--v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 276 (535)
.++.+.....+.+.+.++.+.++..| ++ +++|..+.... ++.++
T Consensus 159 a~sd~r~~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~~~~------------------------------l~~l~ 208 (389)
T TIGR01975 159 AISDHRSAQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGDSKRA------------------------------LQPIY 208 (389)
T ss_pred EEccCcCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCchhh------------------------------HHHHH
Confidence 66777667789999999999999998 88 99998654322 22222
Q ss_pred HHHHhcCCCEEEE---EccCH-HHH-HHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHH
Q 009410 277 RLAEFVNTPLYVV---HVMSM-DAM-EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (535)
Q Consensus 277 ~~~~~~~~~~~~~---H~~~~-~~~-~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~ 351 (535)
+..+..+.+++.. |.... .-. +.++.++ +|..+-.+......++.. ........
T Consensus 209 ~~~~~~di~~~~f~pth~~r~~~l~~~~i~~~~-~gg~iDv~~~~~~~~l~~--------------------~~~~~~~~ 267 (389)
T TIGR01975 209 ELVENTDVPITQFLPTHINRNVPLFEAGLEFAK-KGGTIDLTSSIDPQFRKE--------------------GEVAPAEG 267 (389)
T ss_pred HHHHhcCCChhheecCccCCCHHHHHHHHHHHH-hCCcEEEeCCCCccchhc--------------------cccChHHH
Confidence 2233334333332 33221 112 3444444 454443331110000000 00011246
Q ss_pred HHHHHhcCCe---EEEeCCCCCCChhhhhcCCCCcccCcc-hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 352 LQAALATGIL---QLVGTDHCAFNSTQKAFGIDDFRKIPN-GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 352 ~~~~l~~Gv~---~~lgtD~~~~~~~~~~~~~~~~~~~~~-g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
++.++++|++ ++++||........... ..+..... +.. .+...++.++..++++++++|+++|.|||++||++
T Consensus 268 ~~~~~~~Gv~~~~i~isSD~~gs~p~~~~~--g~~~~~g~g~~~-sl~~~~~~lv~~g~ls~~eal~~~T~npA~~Lgl~ 344 (389)
T TIGR01975 268 IKKALEAGVPLEKVTFSSDGNGSQPFFDEN--GELTGLGVGSFE-TLFEEVREAVKDGDVPLEKALRVITSNVAGVLNLT 344 (389)
T ss_pred HHHHHHcCCCcceEEEEeCCCCCCCccccc--cccccCCcCcHH-HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhCCC
Confidence 8899999997 49999975321110000 00000011 222 23344446666777999999999999999999996
Q ss_pred CCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecc
Q 009410 428 PRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNV 493 (535)
Q Consensus 428 ~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~ 493 (535)
++|+|++|+.|||+++|.+ ..+..||.+|++++++|++..
T Consensus 345 -~~G~I~~G~~ADlvild~~-------------------------~~i~~v~~~G~~v~~~g~~~~ 384 (389)
T TIGR01975 345 -GKGEISPGNDADLVVLDPD-------------------------LRIHSVIARGKLMVKDGKACV 384 (389)
T ss_pred -CCCeECCCCcCCEEEEcCC-------------------------CCEEEEEECCEEEEECCEEEe
Confidence 7899999999999999965 167899999999999999885
No 68
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=100.00 E-value=3.3e-32 Score=277.32 Aligned_cols=348 Identities=17% Similarity=0.167 Sum_probs=209.7
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCC----------CCCceEEecCCCEEeecccccccccccccCCC
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV----------GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS 121 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~----------~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~ 121 (535)
.++++|+|++|+|..+...++|+|+||||++|++.... ..+.++||++|++|+|||||+|+|+..+ +
T Consensus 65 ~MDlVIkNg~VID~~gi~kaDI~IkDGrIaaIG~~~~p~~~~~v~~~~~~~tEVIDa~GkIV~PGlIDtHvH~~~P--~- 141 (567)
T TIGR01792 65 VLDLVITNALILDWTGIYKADIGIKNGRIVGIGKAGNPDTMDGVDMIVGASTEAISGEGKIVTAGGIDTHVHYISP--Q- 141 (567)
T ss_pred cCcEEEECeEEECCCCeEEEEEEEECCEEEEEcCCCcccccccccccCCCCCeEEECCCCEEEECeEEeecCCCCc--c-
Confidence 56899999999997666789999999999999975321 1357899999999999999999998544 1
Q ss_pred CchhhhHHHHHHHHhCCcEEEeccccCC-C----C---ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHH
Q 009410 122 ETIDDFFSGQAAALAGGTTMHIDFVIPI-N----G---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (535)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~-~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (535)
..+.++.+||||+++++... . . ...-......+......++++++... ..+..+.+.++.
T Consensus 142 --------~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~aa~~~~in~g~~g~g---~~~~~~~L~e~i- 209 (567)
T TIGR01792 142 --------QVQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQAADGLPINFGFTGKG---SGSGPAALIEQI- 209 (567)
T ss_pred --------HHHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHHhccCCccEEEEeCC---ccchHHHHHHHH-
Confidence 15778999999999964311 0 0 11111222222333345555554311 122345566666
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhh---HHHHHHHHHHcCCCCcccccccCChhhHHH
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA---VFEGQKRMIELGITGPEGHALSRPPLLEGE 270 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 270 (535)
+.|+.++|.+.. +..+++.+.++++.|++++.++++|+++..+ +....+ +.|
T Consensus 210 ~aGa~gfK~h~~----y~~s~e~L~~al~~A~e~gv~V~iH~ET~~E~g~ve~t~~---a~g------------------ 264 (567)
T TIGR01792 210 EAGACGLKVHED----WGATPAAIDNALSVADEYDVQVAVHTDTLNESGFVEDTIA---AFK------------------ 264 (567)
T ss_pred HcCCcEEEeCCC----CCCCHHHHHHHHHHHHHcCCEEEEeCCCcccchHHHHHHH---HHC------------------
Confidence 578888887543 4579999999999999999999999977665 322222 122
Q ss_pred HHHHHHHHHHhcCCCEEEEEccC---HHHHHHHHHHHHcCC-cEEecccc-c-------eE-------eeCcccccCcCc
Q 009410 271 ATTRAIRLAEFVNTPLYVVHVMS---MDAMEEIAKARKAGQ-RVIGEPVV-S-------GL-------VLDDSWLWHSDF 331 (535)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~H~~~---~~~~~~~~~~~~~g~-~v~~~~~~-~-------~~-------~~~~~~~~~~~~ 331 (535)
+.+++..|... ....+.++.....++ +-+.+|+. + ++ +++++..++.-|
T Consensus 265 ------------~rpIh~~H~~G~g~ghapdi~~~~~~~~~~~~st~pt~p~~~~~~~e~~~m~~~~h~l~~~~~~d~~~ 332 (567)
T TIGR01792 265 ------------GRTIHTYHTEGAGGGHAPDIIVVVGYNNILPSSTNPTLPYTVNTIDEHLDMLMVCHHLNPKIPEDVAF 332 (567)
T ss_pred ------------CCcchhHhhcCCCCCcHHHHHHHcCCCCcccCCCCCCCCCccCchhhhcCeEEEeccCCCCCcccchh
Confidence 23334333322 222233333332231 11122221 1 10 122222111111
Q ss_pred cccceeEEcCCCCCcccHHH-HHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCC--
Q 009410 332 VTAAKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQIS-- 408 (535)
Q Consensus 332 ~~~~~~~~~p~~r~~~~~~~-~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls-- 408 (535)
. ..|...++.+ -.-+++.|+...++||+.+...-.. .+...+.... ++....|.-
T Consensus 333 a---------~~r~r~~t~~ae~~l~d~G~~~~~~sDs~~mgr~~~------------~~~r~~q~a~-k~~~~~g~~~~ 390 (567)
T TIGR01792 333 A---------ESRIRKETIAAEDVLQDMGAISMISSDSQAMGRIGE------------VVTRCWQTAD-KMKKQRGPLPG 390 (567)
T ss_pred h---------hhhccceeccccchhhhCCcEEEecCCchhhCcccc------------eeechHHHHH-HHHHhcCCCcc
Confidence 1 1111111111 2236778999999999753211110 0001111111 222222221
Q ss_pred ------HHHH---HHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEE
Q 009410 409 ------VTDY---VRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTI 479 (535)
Q Consensus 409 ------~~ea---l~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~ 479 (535)
.+.+ |++.|.|||+++|+++++|+|++||.||||||+.+.+ ..++..||
T Consensus 391 ~~~~~~~~rl~r~L~~yT~n~A~a~g~~~~~GsLe~Gk~ADlVv~~~d~f----------------------~~~p~~v~ 448 (567)
T TIGR01792 391 DSPGNDNNRVKRYVAKYTINPAITHGISDYIGSIEVGKLADLVLWEPAFF----------------------GVKPDMVL 448 (567)
T ss_pred cccCChhhhHHHHHHHHhHHHHHHcCcccCceeeCCCCccCEEEEcCccc----------------------CCChheEE
Confidence 1222 9999999999999999999999999999999997633 12578999
Q ss_pred ECCEEEEEC-CeecccC
Q 009410 480 AGGRVVWEN-DELNVVP 495 (535)
Q Consensus 480 ~~Gr~V~~~-~~~~~~~ 495 (535)
++|+++|.. |++....
T Consensus 449 ~~G~i~~~~~Gd~~as~ 465 (567)
T TIGR01792 449 KGGLIAWAIMGDPNASI 465 (567)
T ss_pred ECCEEEEEeCCCccccC
Confidence 999999987 7666654
No 69
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=7.7e-32 Score=275.57 Aligned_cols=349 Identities=17% Similarity=0.105 Sum_probs=218.2
Q ss_pred CCCc-eeeeE-EEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-CC--------------------
Q 009410 65 AHHQ-QIADV-YVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS-------------------- 121 (535)
Q Consensus 65 ~~~~-~~~~I-~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~-------------------- 121 (535)
+++. ++++| +|+||+|++||+... .++||++|++|+|||||+|+|+++... |.
T Consensus 4 ~~~~~~~~~i~~v~~g~I~~Vg~~~~----~~~iD~~g~lv~PGfVn~H~Hl~~~~~rg~~~~~~~~~~~l~~w~~~~~~ 79 (418)
T cd01313 4 PEGWERNVRIEVDADGRIAAVNPDTA----TEAVALLGGALLPGMPNLHSHAFQRAMAGLTEYRGSAADSFWTWRELMYR 79 (418)
T ss_pred CCceecCeEEEEeCCCeEEEecCCCC----CcccccCCCeeccCccccCccHHHHHhcccccccCCCCCChhhHHHHHHH
Confidence 3443 47899 999999999998542 356999999999999999999988521 11
Q ss_pred ----CchhhhH----HHHHHHHhCCcEEEeccccCCCC-----------ChHHHHHHHHHHhcccccccceeee-----e
Q 009410 122 ----ETIDDFF----SGQAAALAGGTTMHIDFVIPING-----------SLTAGFEAYEKKAKNSCMDYGFHMA-----I 177 (535)
Q Consensus 122 ----~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 177 (535)
.++++++ ....+++++||||++|+...... .....++...+.+.+..+...++.. .
T Consensus 80 ~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~~~~~~~~~~ 159 (418)
T cd01313 80 FAARLTPEQIEAIARQLYIEMLLAGITAVGEFHYVHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYARAGFGGP 159 (418)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhCCCEEEEeeeeccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeEEeccCCCCC
Confidence 0112221 22334588999999997532110 1133445555555443332111110 0
Q ss_pred ecC---------ChhhHHHHHHHHH-HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC-hhhHHHHHH
Q 009410 178 TKW---------DEVVSDEMEVMVK-EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GDAVFEGQK 246 (535)
Q Consensus 178 ~~~---------~~~~~~~~~~~~~-~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~-~~~~~~~~~ 246 (535)
... ..+..+.+.++.+ ......+...+.+++...++++.++++.+.|++ |+++++|+.+ ........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~~a~~-g~~i~~H~~e~~~e~~~~~- 237 (418)
T cd01313 160 APNPGQRRFINGYEDFLGLLEKALRAVKEHAAARIGVAPHSLRAVPAEQLAALAALASE-KAPVHIHLAEQPKEVDDCL- 237 (418)
T ss_pred CCchhhhhhcccHHHHHHHHHHHhhhhccCCceEEEEccCCCCCCCHHHHHHHHHHHhc-CCceEEEeCCCHHHHHHHH-
Confidence 000 0112222222211 112234555566666677899999999999999 9999999943 32222111
Q ss_pred HHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccc
Q 009410 247 RMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWL 326 (535)
Q Consensus 247 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~ 326 (535)
...|... ++.+.+ ....+.++.+.|+...+. ++++++++.|+.++.||...
T Consensus 238 --~~~g~~~----------------i~~l~~-~g~l~~~~~~~H~~~l~~-~~~~~la~~g~~v~~~P~sn--------- 288 (418)
T cd01313 238 --AAHGRRP----------------VELLLD-HGHLDARWCLVHATHLTD-NETLLLGRSGAVVGLCPTTE--------- 288 (418)
T ss_pred --HHcCCCH----------------HHHHHH-cCCCCCCEEEEeCCCCCH-HHHHHHHHcCCEEEECCCch---------
Confidence 1223211 111212 234567889999999887 88999999999999998752
Q ss_pred cCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh---
Q 009410 327 WHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE--- 403 (535)
Q Consensus 327 ~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~--- 403 (535)
+..+... .++++++++|+++++|||..... + +|. +++.....++...
T Consensus 289 ----~~lg~g~------------~p~~~l~~~Gv~v~lGtD~~~~~-d-------~~~------~~~~~~~~~~~~~~~~ 338 (418)
T cd01313 289 ----ANLGDGI------------FPAAALLAAGGRIGIGSDSNARI-D-------LLE------ELRQLEYSQRLRDRAR 338 (418)
T ss_pred ----hhccCCC------------CCHHHHHHCCCcEEEecCCCCCc-C-------HHH------HHHHHHHHHHHHhccc
Confidence 2222211 22889999999999999954321 1 121 2233222322221
Q ss_pred -----cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEE
Q 009410 404 -----SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVT 478 (535)
Q Consensus 404 -----~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v 478 (535)
..++++.++|+++|.|+|+++|++ .|+|++||+||||++|.+.++..+.. ..++.....|.+. ..+|+.|
T Consensus 339 ~~~~~~~~~~~~~~l~~~T~~gA~alg~~--~Gsle~Gk~ADlvvld~~~~~~~p~~-~~~~~~~lv~~~~--~~~V~~v 413 (418)
T cd01313 339 NVLATAGGSSARALLDAALAGGAQALGLA--TGALEAGARADLLSLDLDHPSLAGAL-PDTLLDAWVFAAG--DREVRDV 413 (418)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHhCCC--CCeECCCCccCEEEEcCCCccccCCC-chhHHHHHeecCC--CCceeEE
Confidence 236999999999999999999994 89999999999999998877655421 0112223344433 3589999
Q ss_pred EECCE
Q 009410 479 IAGGR 483 (535)
Q Consensus 479 ~~~Gr 483 (535)
||+|+
T Consensus 414 ~V~G~ 418 (418)
T cd01313 414 VVGGR 418 (418)
T ss_pred EeCCC
Confidence 99996
No 70
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=100.00 E-value=9.6e-31 Score=266.55 Aligned_cols=355 Identities=18% Similarity=0.208 Sum_probs=210.3
Q ss_pred cEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCC---CCceEEecCCCEEeecccccccccccccCC-CCchhhhHH
Q 009410 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHTHLAMEFMG-SETIDDFFS 129 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~---~~~~vID~~G~~vlPGlID~H~H~~~~~~g-~~~~~~~~~ 129 (535)
.++|+|++|++++...+++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+...... .........
T Consensus 2 ~~~i~~~~v~~~~~~~~~~i~i~~g~I~~v~~~~~~~~~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~~~~~~t~~~ 81 (388)
T PRK10657 2 FTLLKNAHVYAPEDLGKKDILIAGGKIIAIADNINIPDIVPDIEVIDASGKILVPGFIDQHVHIIGGGGEGGFSTRTPEV 81 (388)
T ss_pred eEEEEccEEECCCCCcceEEEEECCEEEEecCCccccccCCCCeEEECCCCEEcccceeeeeCcccCCCCcccccCCHHH
Confidence 4789999999987666789999999999998754321 346899999999999999999998742100 011123345
Q ss_pred HHHHHHhCCcEEEeccccCCCC-ChHHHHHHHH----HHhcccccccceee-eeecCChhhHHHHHHHHHHcCCCEEEEE
Q 009410 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYE----KKAKNSCMDYGFHM-AITKWDEVVSDEMEVMVKEKGINSFKFF 203 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~ik~~ 203 (535)
...+++++||||++|+.+.... .....+.... ..+-+.+...+++. ......+...+++....+..|.. ++.
T Consensus 82 ~~~~~~~~GvTTvvd~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g--~~~ 159 (388)
T PRK10657 82 QLSDLTEAGITTVVGLLGTDGITRSMESLLAKARALEEEGISAYMYTGSYHVPVRTITGSIRKDIVLIDKVIGVG--EIA 159 (388)
T ss_pred HHHHHHhCCceEEECCCCCCCCCCCHHHHHHHHHHHHhhCCEEEEEecCCCCCchhhhcchhhceehhhhhhCcc--eee
Confidence 6788899999999998743221 1122222222 22222221111111 00001111111111110011211 343
Q ss_pred eecCCCCcCCHHHHHHHHHHHHhcCC------eEEEEcCC-hhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHH
Q 009410 204 MAYKGSFMINDELLIEGFKRCKSLGA------LAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAI 276 (535)
Q Consensus 204 ~~~~~~~~~~~~~l~~~~~~a~~~g~------~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 276 (535)
...+.....+.+.+.++.+.++..+. ++++|+.. ........+.+.+.|+..
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~~~~~~l~~v~~~l~~~Gv~~--------------------- 218 (388)
T PRK10657 160 ISDHRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMGDGKKGLQPLFELLENTDIPI--------------------- 218 (388)
T ss_pred eccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCchHHHHHHHHHHHhcCCCc---------------------
Confidence 34444455688999988888876554 79999863 322222112223344321
Q ss_pred HHHHhcCCCEEEEEccCHH-HHHHHHHHHHcCCcEEec-cccceEeeCcccccCcCccccceeEEcCCCCCc---ccHHH
Q 009410 277 RLAEFVNTPLYVVHVMSMD-AMEEIAKARKAGQRVIGE-PVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS---GHNKA 351 (535)
Q Consensus 277 ~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~---~~~~~ 351 (535)
..+...|+.... ..+....+.+.|..+... ..+ +.+.. .....
T Consensus 219 -------~~~~~~H~~~~~~~~~~~~~~~~~G~~~~v~~~~~-------------------------~~~~~~~~~~~~~ 266 (388)
T PRK10657 219 -------SQFLPTHVNRNEPLFEQALEFAKKGGVIDLTTSDP-------------------------DFLGEGEVAPAEA 266 (388)
T ss_pred -------ceeeCcccCCCHHHHHHHHHHHHcCCeEEEecCCC-------------------------cccccCccCHHHH
Confidence 124456655411 112333344466555322 221 11111 12366
Q ss_pred HHHHHhcCC---eEEEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcC
Q 009410 352 LQAALATGI---LQLVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 425 (535)
Q Consensus 352 ~~~~l~~Gv---~~~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg 425 (535)
+++++++|+ +++++||+.......... +-+ .+. +... +...+..++...++|++++++++|.|||+++|
T Consensus 267 l~~~~~~G~~~d~v~l~tD~~~~~~~~~~~--g~~--~~~g~~~~~~-l~~~~~~~~~~~gis~~~~l~~aT~npA~~lg 341 (388)
T PRK10657 267 LKRALEAGVPLSRVTLSSDGNGSLPKFDED--GNL--VGLGVGSVES-LLEEVRELVKDEGLPLEDALKPLTSNVARFLK 341 (388)
T ss_pred HHHHHHcCCChhheEEECCCCCCCceeccC--CCE--eccCcCchhh-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhC
Confidence 899999998 789999974332110000 000 111 2222 23333355556679999999999999999999
Q ss_pred CCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeeccc
Q 009410 426 VYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 494 (535)
Q Consensus 426 l~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~ 494 (535)
+++ +|+|++|+.|||+++| ++ ..|..||++|++|+++|+++.+
T Consensus 342 ~~~-~G~l~~G~~AD~vv~~-~~------------------------~~~~~~~~~G~~v~~~~~~~~~ 384 (388)
T PRK10657 342 LNG-KGEILPGKDADLLVLD-DD------------------------LRIEQVIAKGKLMVKDGKALVK 384 (388)
T ss_pred CCC-CCccCCCCccCEEEEC-CC------------------------CCEEEEEECCEEEEECCEEecc
Confidence 965 8999999999999998 32 2689999999999999998763
No 71
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=100.00 E-value=3.9e-31 Score=270.88 Aligned_cols=374 Identities=22% Similarity=0.305 Sum_probs=249.2
Q ss_pred cEEEEccEEEcCCCc---eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-C---------
Q 009410 54 KILIKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G--------- 120 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~---~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g--------- 120 (535)
.++++|..++..++. +.+++.|+||+|+.|++....+.+.++||++|++|+|||||+|+|+.+... +
T Consensus 3 ~~~i~~~~~~~~d~~~~~~~~~~~i~~g~I~~ig~~~~~~~~~~~iD~~~~lv~Pgfvn~H~H~~~t~~~g~~~~~~l~~ 82 (421)
T COG0402 3 MLLIRGDLLLTNDPEGRIEDGDLVIEDGKIVAIGANAEGPPDEEVIDAKGKLVLPGFVNAHTHLDQTLLRGLADDLPLLE 82 (421)
T ss_pred ceeeeCcEEeecCcccceeeeeEEEcCCEEEEeCCcCCCCCCceeecCCCCEeccCccccccchHHHHHhhhhcccchHH
Confidence 467888888875443 469999999999999997654456899999999999999999999887621 0
Q ss_pred ------------CCchhhhHH----HHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceee-----eeec
Q 009410 121 ------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-----AITK 179 (535)
Q Consensus 121 ------------~~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 179 (535)
..++++.+. ....++++|+|+++.............++...+.+.+......+.. ....
T Consensus 83 wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~p~~~~~ 162 (421)
T COG0402 83 WLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHVDVVAESADAAFEAALEVGLRAVLGPVLQDVAFPDPGAE 162 (421)
T ss_pred HHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCccccccccchhhhhHHHHHHHHHHhCCeeEeeeccccCCCCccccc
Confidence 112223222 3345689999997654333222345566666666655433322222 1111
Q ss_pred CChhhHHHHHHHH-HHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEc-CChhhHHHHHHHHHHcCCCCcc
Q 009410 180 WDEVVSDEMEVMV-KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPE 257 (535)
Q Consensus 180 ~~~~~~~~~~~~~-~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~ 257 (535)
..++ .++..+.. +..+...+.+...++....++++.++.+.+.++++|+++++|+ ++...+....+ ..|...
T Consensus 163 ~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~~---~~g~~~-- 236 (421)
T COG0402 163 TDEE-LEETEELLREAHGLGRDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIHLAETLDEVERVLE---PYGARP-- 236 (421)
T ss_pred chHH-HHHHHHHHHHHhcCCCeeEEEecCCCCCCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHHh---hcCCCH--
Confidence 1111 12222222 2345556667777888889999999999999999999999999 55554444433 122211
Q ss_pred cccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcccccee
Q 009410 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (535)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (535)
+. .+......+.++.+.|+.+... ++++.+++.|+.+++||.+ |+.++++.
T Consensus 237 --------------~~-~~~~~g~l~~~~~~~H~~~~~~-~e~~~l~~~g~~v~~cP~s-------------N~~L~sG~ 287 (421)
T COG0402 237 --------------VE-RLDLLGLLGSHTLLAHCVHLSE-EELELLAESGASVVHCPRS-------------NLKLGSGI 287 (421)
T ss_pred --------------HH-HHHHcCCCCCCeEEEEeccCCH-HHHHHHhhCCCeEEECcch-------------hccccCCC
Confidence 11 1122333456788999998887 7888888999999999986 44444442
Q ss_pred EEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHH--HHHHH
Q 009410 338 VMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVT--DYVRL 415 (535)
Q Consensus 338 ~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~--eal~~ 415 (535)
.+++++++.|+++++|||+..++.... +|. ++....++++.......+.. ++|++
T Consensus 288 ------------~p~~~~~~~gv~v~~gTD~~~~~~~~d-----~l~------~~~~a~~l~~~~~~~~~~~~~~~~l~~ 344 (421)
T COG0402 288 ------------APVRRLLERGVNVALGTDGAASNNVLD-----MLR------EMRTADLLQKLAGGLLAAQLPGEALDM 344 (421)
T ss_pred ------------CCHHHHHHcCCCEEEecCCccccChHH-----HHH------HHHHHHHHHHhhcCCCcccchHHHHHH
Confidence 228899999999999999877665332 233 44555555444331111111 38999
Q ss_pred HhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeec
Q 009410 416 TSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELN 492 (535)
Q Consensus 416 ~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~ 492 (535)
+|.|+|++||+ ++.|+|++||.|||||+|.+.+...... +.+ ...+... ...|..||++|+.++.+++..
T Consensus 345 aT~~gA~alg~-~~~G~le~G~~ADlvvld~~~~~~~~~~-~~~---~~v~~~~--~~~v~~v~~~g~~v~~~~~~~ 414 (421)
T COG0402 345 ATLGGAKALGL-DDIGSLEVGKKADLVVLDASAPHLAPLR-PVS---RLVFAAG--GKDVDRVLVDGRLVMEDGRLL 414 (421)
T ss_pred HHhhHHHHcCC-cccCCcccccccCEEEEcCCCCcccccc-HHH---HHHHhcC--CCceeEEEECCEEEEEcceeh
Confidence 99999999998 7899999999999999999876443322 111 1112211 238999999999999999887
No 72
>PRK07572 cytosine deaminase; Validated
Probab=100.00 E-value=1.6e-31 Score=274.08 Aligned_cols=360 Identities=18% Similarity=0.219 Sum_probs=211.5
Q ss_pred ccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-CC----------
Q 009410 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS---------- 121 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~---------- 121 (535)
++++|+|++|+++. ...+|+|+||+|++|++..+. .+.++||++|++|+|||||+|+|+...+. +.
T Consensus 2 ~~~~i~~~~i~~~~--~~~~i~i~~g~I~~v~~~~~~-~~~~~id~~g~~~~PG~id~h~h~~~~~~~~~~~~~~~g~l~ 78 (426)
T PRK07572 2 FDLIVRNANLPDGR--TGIDIGIAGGRIAAVEPGLQA-EAAEEIDAAGRLVSPPFVDPHFHMDATLSYGLPRVNASGTLL 78 (426)
T ss_pred CcEEEECeEECCCC--eeEEEEEECCEEEEecCCCCC-CcCceEeCCCCEEcccceehhhCcchhhccCCCCCCCCCCHH
Confidence 35789999999865 367899999999999986432 34689999999999999999999976421 11
Q ss_pred ------------CchhhhH----HHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccccccc-eeeeeecCC
Q 009410 122 ------------ETIDDFF----SGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYG-FHMAITKWD 181 (535)
Q Consensus 122 ------------~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 181 (535)
.+++++. ..+..++++|||+++|+...... ......+.....++....... +........
T Consensus 79 e~l~~~~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~g~~~~ 158 (426)
T PRK07572 79 EGIALWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVAPYLDLQLVAFPQDGVLRS 158 (426)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCcccHHHHHHHHHHHhhccceEEEEeccChhhccC
Confidence 1233332 34456789999999997432111 122222211111111111010 000001111
Q ss_pred hhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEc-CChhhHHHHHHHHHHcCCCCccccc
Q 009410 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
.+..+.+++.. +.|++.+............+.+.++.+++.|+++|+++.+|+ +.........+.+
T Consensus 159 ~~~~~~~~~~l-~~g~d~iGg~p~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~------------ 225 (426)
T PRK07572 159 PGAVDNLERAL-DMGVDVVGGIPHFERTMADGAESVRLLCEIAAERGLRVDMHCDESDDPLSRHIETL------------ 225 (426)
T ss_pred ccHHHHHHHHH-HcCCCEEeCCCCCccccchHHHHHHHHHHHHHHcCCCeEEEECCCCChhHHHHHHH------------
Confidence 22345566666 467777642211111111224899999999999999999999 4443332222111
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH------HHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcccc
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD------AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~------~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 334 (535)
..+..+. ...+ ++.+.|+.... ..+.++.+++.|+.+++||............
T Consensus 226 -----------~~~~~~~-G~~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~~P~~n~~l~~~~~~-------- 284 (426)
T PRK07572 226 -----------AAETQRL-GLQG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIANPLINITLQGRHDT-------- 284 (426)
T ss_pred -----------HHHHHHh-CCCC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEECchhhhhhcCCCCC--------
Confidence 0111111 1112 57789996532 2367899999999999998653211111000
Q ss_pred ceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCC----HH
Q 009410 335 AKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQIS----VT 410 (535)
Q Consensus 335 ~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls----~~ 410 (535)
.|. ......+++++++|+++++|||+...... ++.. ..-++. +... ....+++ +.
T Consensus 285 -----~~~---~~g~~~v~~l~~~GV~v~lGtD~~~~~~~-------~~~~-~~~~e~-~~~~----~~~~~~~~~~~l~ 343 (426)
T PRK07572 285 -----YPK---RRGMTRVPELMAAGINVAFGHDCVMDPWY-------SLGS-GDMLEV-AHMG----LHVAQMTGQDAMR 343 (426)
T ss_pred -----CCC---CCCCcCHHHHHHCCCcEEEecCCCCCCCC-------CCCC-CCHHHH-HHHH----HHHHcCCCHHHHH
Confidence 000 01123489999999999999996421100 0000 000111 1111 1122344 34
Q ss_pred HHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcC-CCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECC
Q 009410 411 DYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNP-NSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEND 489 (535)
Q Consensus 411 eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~-~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~ 489 (535)
++|+++|.|||++||+++ .| |++||.||||++|. ++...+ ....++..||++|++|++..
T Consensus 344 ~~l~~aT~~~A~~lgl~~-~g-i~~G~~ADlvl~d~~~p~e~i-----------------~~~~~~~~V~~~G~~v~~~~ 404 (426)
T PRK07572 344 ACFDAVTVNPARIMGLEG-YG-LEPGCNADLVLLQARDPIEAI-----------------RLRAARLAVIRRGKVIARTP 404 (426)
T ss_pred HHHHHhhcchHHhhCCCC-cC-CCCCCcCCEEEEeCCCHHHHH-----------------HhcCCceEEEECCEEEeccC
Confidence 666799999999999965 67 99999999999994 543322 22357899999999998873
No 73
>PRK14085 imidazolonepropionase; Provisional
Probab=100.00 E-value=5.2e-31 Score=266.90 Aligned_cols=315 Identities=20% Similarity=0.183 Sum_probs=202.5
Q ss_pred cEEEEc-cEEEcCCC---------ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-C--
Q 009410 54 KILIKG-GTVVNAHH---------QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G-- 120 (535)
Q Consensus 54 ~~vi~n-~~vi~~~~---------~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g-- 120 (535)
+++|+| +.|++++. .++++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..... +
T Consensus 2 ~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~~~iD~~g~~v~PGlId~H~Hl~~~~~r~~~ 81 (382)
T PRK14085 2 STLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADAPAADERVDAGGRAVLPGFVDSHSHLVFAGDRSAE 81 (382)
T ss_pred cEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccCCCCCeEEeCCCCEEecCeEecCcCccccCChhHH
Confidence 578999 59998752 2578999999999999986544556789999999999999999999965310 0
Q ss_pred -----------------------CCchhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHh--ccccccc
Q 009410 121 -----------------------SETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA--KNSCMDY 171 (535)
Q Consensus 121 -----------------------~~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 171 (535)
..+.++.+ ..+..++++|+||++|+..... .....++.....+ .......
T Consensus 82 ~~~~~~~~~~~~~~i~~~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T PRK14085 82 FAARMAGEPYSAGGIRTTVAATRAASDEELRANVRRLVAEALRQGTTTVETKTGYGL-TVEDEARSARIAAEFTDEVTFL 160 (382)
T ss_pred HHhhhcCCCccCCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcCCC-CHHHHHHHHHHHHHhhhcceee
Confidence 01222222 2345678999999999753321 2223333222111 0000001
Q ss_pred ceeeeeec--CC-hhhHHH----HHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHH
Q 009410 172 GFHMAITK--WD-EVVSDE----MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (535)
Q Consensus 172 ~~~~~~~~--~~-~~~~~~----~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~ 244 (535)
+.+..... .+ .+.... +.... ....+.+|++.+. ...+.+.++++++.|++.|+++.+|+.+... ...
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~idi~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~-~~~ 235 (382)
T PRK14085 161 GAHVVPPEYAGDADEYVDLVCGPMLDAV-APHARWIDVFCER---GAFDEDQSRRVLTAGRAAGLGLRVHGNQLGP-GPG 235 (382)
T ss_pred ccccCCcccCCCHHHHHHHHHHHHHHHH-HHhCCeEEEEecC---CCCCHHHHHHHHHHHHHcCCCeEEEeCcccC-ChH
Confidence 10110011 11 111111 22333 3457788887653 2457899999999999999999999864211 011
Q ss_pred HHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcc
Q 009410 245 QKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDS 324 (535)
Q Consensus 245 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 324 (535)
++.+.+.|. . .+.|+...+. ++++++++.|+.++.+|..+
T Consensus 236 v~~~~~~g~-------------------------------~-~i~H~~~l~~-~~~~~la~~gv~~~~~P~~~------- 275 (382)
T PRK14085 236 VRLAVELGA-------------------------------A-SVDHCTYLTD-ADVDALAGSGTVATLLPGAE------- 275 (382)
T ss_pred HHHHHHcCC-------------------------------C-cHHHhCCCCH-HHHHHHHHcCCEEEECcHHH-------
Confidence 222222222 1 3567777776 88999999998887776531
Q ss_pred cccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhc
Q 009410 325 WLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVES 404 (535)
Q Consensus 325 ~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~ 404 (535)
+..+.. ..++++++++|+++++|||+.+..... ..+...+...+..
T Consensus 276 ------~~~~~~------------~~~~~~l~~aGv~v~lgsD~~~~~~~~----------------~~~~~~~~~~~~~ 321 (382)
T PRK14085 276 ------FSTRQP------------YPDARRLLDAGVTVALASDCNPGSSYT----------------SSMPFCVALAVRQ 321 (382)
T ss_pred ------HhcCCC------------CchHHHHHHCCCcEEEEeCCCCCCChH----------------HHHHHHHHHHHHh
Confidence 111111 134899999999999999975432211 1122222223445
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCc
Q 009410 405 GQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSS 449 (535)
Q Consensus 405 ~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~ 449 (535)
.+++++++|+++|.|||+++|++ +.|+|++||.|||||+|.+..
T Consensus 322 ~~l~~~~al~~aT~~~A~~lg~~-~~G~l~~G~~ADlvv~d~~~~ 365 (382)
T PRK14085 322 MGMTPAEAVWAATAGGARALRRD-DVGVLAVGARADLHVLDAPSH 365 (382)
T ss_pred cCCCHHHHHHHHHHHHHHHcCCC-CCCCcCCCCCCCEEEEcCCCC
Confidence 67999999999999999999996 589999999999999998653
No 74
>PRK05985 cytosine deaminase; Provisional
Probab=100.00 E-value=4.8e-31 Score=268.40 Aligned_cols=349 Identities=16% Similarity=0.135 Sum_probs=210.1
Q ss_pred ccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCc---------
Q 009410 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSET--------- 123 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~--------- 123 (535)
.+++|+|++|+++. ..+|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+.....+...
T Consensus 2 ~~~~i~~~~i~~~~---~~~v~i~~g~i~~i~~~~~~~~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~~~~~~~~~~~~~ 78 (391)
T PRK05985 2 TDLLFRNVRPAGGA---AVDILIRDGRIAAIGPALAAPPGAEVEDGGGALALPGLVDGHIHLDKTFWGDPWYPNEPGPSL 78 (391)
T ss_pred CCEEEECcEECCCC---eeEEEEECCEEEEecCCCCCCCCCcEEECCCCEEecceEeeEEccCccccCCccccCCCCCCH
Confidence 45899999999975 569999999999999875444467899999999999999999999654111100
Q ss_pred --------------hhhh----HHHHHHHHhCCcEEEeccccCCCC----ChHHHHHHHHHHhcccccccceeeeee-cC
Q 009410 124 --------------IDDF----FSGQAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAKNSCMDYGFHMAIT-KW 180 (535)
Q Consensus 124 --------------~~~~----~~~~~~~l~~GvTtv~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 180 (535)
..++ ......++++|+|+++|+...... .....++...........++..+.... ..
T Consensus 79 ~~~i~~~~~~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~~ 158 (391)
T PRK05985 79 RERIANERRRRAASGHPAAERALALARAAAAAGTTAMRSHVDVDPDAGLRHLEAVLAARETLRGLIDIQIVAFPQSGVLS 158 (391)
T ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCcccchHHHHHHHHHHhhCcccEEEEeccCccccC
Confidence 0011 123456789999999988543221 222222222221111111111111101 11
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
.....+.+++.. +.|.+.+.. ..+......+++.+.++++.|+++|+++.+|+.......
T Consensus 159 ~~~~~~ll~~~l-~~g~~~~gg-~~p~~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~~d~~------------------ 218 (391)
T PRK05985 159 RPGTAELLDAAL-RAGADVVGG-LDPAGIDGDPEGQLDIVFGLAERHGVGIDIHLHEPGELG------------------ 218 (391)
T ss_pred CcCHHHHHHHHH-HcCCCEEeC-CCCCCcCCCHHHHHHHHHHHHHHhCCCcEEeeCCCCCcc------------------
Confidence 111234455555 556654322 233334556789999999999999999999984432110
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCC--CEEEEEccCHH------HHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcc
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNT--PLYVVHVMSMD------AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~H~~~~~------~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 332 (535)
...+.+.++.....+. ++.+.|+.... ..+.++++++.|+.++.++..
T Consensus 219 --------~~~~~~~~e~~~~~g~~~~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~~~~---------------- 274 (391)
T PRK05985 219 --------AFQLERIAARTRALGMQGRVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTNAPG---------------- 274 (391)
T ss_pred --------HHHHHHHHHHHHHhCCCCCEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEeCCC----------------
Confidence 0112222333333342 47788886431 125688899999988765321
Q ss_pred ccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHH-HHHHHHHHHHhcCCCCHHH
Q 009410 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEE-RMHLVWDTMVESGQISVTD 411 (535)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~-~l~~~~~~~~~~~~ls~~e 411 (535)
+..+ .++++++++|+++++|||+...+.. ||... ..++. .+...... . ...-++.+
T Consensus 275 -~~~~------------~~~~~l~~~Gv~v~lGtD~~~~~~~-------p~~~~-~~~~~~~~~~~~~~-~-~~~~~~~~ 331 (391)
T PRK05985 275 -SVPV------------PPVAALRAAGVTVFGGNDGIRDTWW-------PYGNG-DMLERAMLIGYRSG-F-RTDDELAA 331 (391)
T ss_pred -CCCC------------CCHHHHHHCCCeEEEecCCCCCCCc-------CCCCC-cHHHHHHHHHHHHc-c-CChHHHHH
Confidence 0111 2389999999999999996432111 11110 00111 11111110 0 11124579
Q ss_pred HHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECC
Q 009410 412 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEND 489 (535)
Q Consensus 412 al~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~ 489 (535)
+|+++|.|||+++|+++ ++|++||.||||++|.+++.... .. ...+..||++|++||++|
T Consensus 332 al~~~T~~~A~~lg~~~--~~l~~G~~ADlvvld~~~~~~~~------------~~----~~~~~~v~~~G~~v~~~~ 391 (391)
T PRK05985 332 ALDCVTHGGARALGLED--YGLAVGARADFVLVDAETVAEAV------------VA----VPVRRLVVRGGRIVARDG 391 (391)
T ss_pred HHHHHcchhHHHhCCcc--cCCCCCCcCCEEEECCCCHHHHH------------hh----CCcceEEEECCEEEecCC
Confidence 99999999999999954 45999999999999987653221 11 124677999999999986
No 75
>PRK09230 cytosine deaminase; Provisional
Probab=100.00 E-value=8.6e-31 Score=267.50 Aligned_cols=360 Identities=19% Similarity=0.214 Sum_probs=214.0
Q ss_pred ccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCC-CCceEEecCCCEEeecccccccccccccC-CC---------
Q 009410 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--------- 121 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~-~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~--------- 121 (535)
..++|+|++|+++.. ..+|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+...+. +.
T Consensus 4 ~~~li~~~~~~~~~~--~~~i~i~~g~I~~i~~~~~~~~~~~~~id~~g~~v~PGlid~H~H~~~~~~~~~~~~~~~~~l 81 (426)
T PRK09230 4 ALMTIKNARLPGKEG--LWQITIEDGKISAIEPQSEASLEAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGEPNWNQSGTL 81 (426)
T ss_pred ceEEEECcEEcCCCe--eEEEEEECCEEEEecCCCCCCCCCCceEeCCCCEeccceeEEEEccccceecCCCccCCCCCH
Confidence 568999999988543 469999999999999864322 35789999999999999999999986521 11
Q ss_pred -------------CchhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHH----HHHhcccccccceeeeee-c
Q 009410 122 -------------ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAY----EKKAKNSCMDYGFHMAIT-K 179 (535)
Q Consensus 122 -------------~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~ 179 (535)
.++++++ ..+..++++|||+++++..+... ....++.. .+.....-+.+....... .
T Consensus 82 ~~~i~~~~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~-~~~~~~a~~~~~~~~~~~~~~~i~a~~~~~~~ 160 (426)
T PRK09230 82 FEGIERWAERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDP-TLTALKAMLEVKEEVAPWVDLQIVAFPQEGIL 160 (426)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCc-chhHHHHHHHHHHHhhCcceEEEEeccCcccc
Confidence 1112221 23445688999999988654322 11222222 111111111111111000 0
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEEeecCCCCc--CCHHHHHHHHHHHHhcCCeEEEEcCChhhH-HHHHHHHHHcCCCCc
Q 009410 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM--INDELLIEGFKRCKSLGALAMVHAENGDAV-FEGQKRMIELGITGP 256 (535)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~--~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~-~~~~~~~~~~g~~~~ 256 (535)
...+..+.++... +.+.+.+.. .++.... .+.+.+..+++.|+++|+++.+|+...... ....
T Consensus 161 ~~~~~~~~l~~a~-~~~~~~vg~--~p~~~~~~~~~~e~l~~~~~~A~~~g~~~~~H~~E~~~~~~~~~----------- 226 (426)
T PRK09230 161 SYPNGEALLEEAL-RLGADVVGA--IPHFEFTREYGVESLHKAFALAQKYDRLIDVHCDEIDDEQSRFV----------- 226 (426)
T ss_pred CCccHHHHHHHHH-HcCCCEEeC--CCCccccchhHHHHHHHHHHHHHHhCCCcEEEECCCCCcchHHH-----------
Confidence 0112223344433 344443322 1222222 257899999999999999999999543211 1001
Q ss_pred ccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH------HHHHHHHHHHcCCcEEeccccceEeeCcccccCcC
Q 009410 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD------AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (535)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~------~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (535)
....+.++... .+.++.+.|+.... ..++++++++.|+.|+.||..+..+...
T Consensus 227 -------------~~~~~~~~~~g-l~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~cP~sn~~l~~~------- 285 (426)
T PRK09230 227 -------------ETVAALAHREG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGR------- 285 (426)
T ss_pred -------------HHHHHHHHHhC-CCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhcCC-------
Confidence 11111122122 35678999998872 3378999999999999999864322110
Q ss_pred ccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcc-hHHHHHHHHHHHHHhcCCC-C
Q 009410 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN-GIEERMHLVWDTMVESGQI-S 408 (535)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~-g~~~~l~~~~~~~~~~~~l-s 408 (535)
....|. + ....++++++++|+++++|||+... +|..... .+...+.... ........ +
T Consensus 286 ------~~~~p~-~--~g~~pi~~l~~aGv~V~lGTD~~~d----------~~~~~~~~d~~~~~~~~~-~~~~~~~~~~ 345 (426)
T PRK09230 286 ------FDTYPK-R--RGITRVKEMLEAGINVCFGHDDVFD----------PWYPLGTANMLQVLHMGL-HVCQLMGYGQ 345 (426)
T ss_pred ------CCCCCC-C--CCCcCHHHHHHCCCeEEEecCCCCC----------CCcCCCCCCHHHHHHHHH-HHHhhCChhh
Confidence 000000 0 0113489999999999999996432 2211111 1111111111 00111112 3
Q ss_pred HHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC
Q 009410 409 VTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 409 ~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~ 488 (535)
+.++|+++|.|||+++|+++ .| |++||.||||+++.+.+..+- +. ...++.||++|++|+..
T Consensus 346 ~~~~l~maT~~gA~alg~~~-~g-le~G~~ADlv~~~~~~~~~~~------------~~----~~~~~~v~~~G~~v~~~ 407 (426)
T PRK09230 346 INDGLNLITTHSARTLNLQD-YG-IEVGNPANLIILPAENGFDAV------------RR----QVPVRYSIRHGKVIAET 407 (426)
T ss_pred HHHHHHHHhcchhHHhCCCC-cC-CCCCCcCCEEEEeCCCHHHHH------------hc----cCCceEEEECCEEEecc
Confidence 68999999999999999965 78 999999999999975443321 00 24789999999999866
No 76
>PRK10027 cryptic adenine deaminase; Provisional
Probab=100.00 E-value=1.3e-30 Score=270.66 Aligned_cols=328 Identities=17% Similarity=0.169 Sum_probs=228.2
Q ss_pred cccEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHH
Q 009410 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~ 129 (535)
..+++|+|++|+++.. ...++|+|+||+|++|++......+.++||++|++|+|||||+|+|+..+ . .+++++
T Consensus 29 ~~dllI~ng~vv~~~~~~~~~~~V~I~~GrI~~Vg~~~~~~~~~~vIDa~G~~v~PGlIDaHvHiess--~-~~p~~~-- 103 (588)
T PRK10027 29 VADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYADAPALQRIDARGATAVPGFIDAHLHIESS--M-MTPVTF-- 103 (588)
T ss_pred CCCEEEECcEEEeCCCCcEEeeEEEEECCEEEEeCCCCCCCCCCeEEECCCCEEEECeEeccccCCcc--c-CCHhHH--
Confidence 5779999999998643 35679999999999997653322346899999999999999999999876 2 366666
Q ss_pred HHHHHHhCCcEEEeccccCCC-CChHHHHHHHHHHhcccccccceeee----eec-CC----hhhHHHHHHHHHHcCCCE
Q 009410 130 GQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYGFHMA----ITK-WD----EVVSDEMEVMVKEKGINS 199 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~----~~~~~~~~~~~~~~g~~~ 199 (535)
...++.+|+||++++..... ....+.++...+......+..++..+ .+. .+ .-..++++++.+..++-+
T Consensus 104 -a~aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~p~~~~~~~ps~vpa~~~~Et~Ga~~~~~~~~~~l~~~~v~g 182 (588)
T PRK10027 104 -ETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQVTG 182 (588)
T ss_pred -HHHHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhCCCeeEEeecccCcCCcccccCCCcCCHHHHHHHhcCCCcee
Confidence 44689999999998643322 24556666666665554444333221 111 11 114567777776778888
Q ss_pred EEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHH
Q 009410 200 FKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (535)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (535)
+...++|++....+++.+.++... .++.+..|++... ...+..+...|+.+
T Consensus 183 lgEvMn~~~V~~~d~~~~~ki~~~---~~~~idGH~p~l~--g~~L~ay~aaGi~s------------------------ 233 (588)
T PRK10027 183 LAEMMDYPGVISGQNALLDKLDAF---RHLTLDGHCPGLG--GKELNAYIAAGIEN------------------------ 233 (588)
T ss_pred EEeccCccccccCCHHHHHHHHHh---CCCceECCCCCCC--hHHHHHHHHcCCCC------------------------
Confidence 888899998887788888888844 7999999998665 34556666666643
Q ss_pred HhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhc-
Q 009410 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT- 358 (535)
Q Consensus 280 ~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~- 358 (535)
.|.....+ +.+++++ .|+.+...- ++..+ +...+..++..
T Consensus 234 ---------DHE~~t~e-ea~eklr-~Gm~v~iRe-------------------gS~~~---------nl~~l~~~~~~~ 274 (588)
T PRK10027 234 ---------CHESYQLE-EGRRKLQ-LGMSLMIRE-------------------GSAAR---------NLNALAPLINEF 274 (588)
T ss_pred ---------CcccCCHH-HHHHHHH-CCCEEEEeC-------------------Ccccc---------CHHHHHHHhhcc
Confidence 34444333 5555554 677765421 11111 11222222222
Q ss_pred -CCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCC
Q 009410 359 -GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGS 437 (535)
Q Consensus 359 -Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk 437 (535)
--.++++||......... +.++...++.+++..|+++++|++++|.|||+++|++ ++|+|++|+
T Consensus 275 ~~~~~~l~TDd~~~~~l~~--------------~Ghi~~~vr~av~~~Gi~~~~Ai~mAT~nPA~~lgl~-d~G~IapG~ 339 (588)
T PRK10027 275 NSPQCMLCTDDRNPWEIAH--------------EGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLN-HLGLLAPGK 339 (588)
T ss_pred CCCeEEEEcCCCChHHHHh--------------ccCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCC-CCcccCCCC
Confidence 146899999754221111 2356777878888778999999999999999999995 589999999
Q ss_pred CccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeec
Q 009410 438 DADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELN 492 (535)
Q Consensus 438 ~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~ 492 (535)
.|||+++|.... .++..||++|++|+++ +.+
T Consensus 340 ~ADlvvld~l~~-----------------------~~v~~v~~~G~~v~~~-~~~ 370 (588)
T PRK10027 340 QADIVLLSDARK-----------------------VTVQQVLVKGEPIDAQ-TLQ 370 (588)
T ss_pred cCCEEEEccCCC-----------------------ceEEEEEECCEEeecc-ccc
Confidence 999999984211 2688999999999998 655
No 77
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=100.00 E-value=1.4e-30 Score=270.67 Aligned_cols=324 Identities=19% Similarity=0.240 Sum_probs=220.3
Q ss_pred cEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHH
Q 009410 54 KILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (535)
Q Consensus 54 ~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~ 131 (535)
+++|+|++|+++.+ ...++|+|+||+|++|++.. +.++||++|++|+|||||+|+|+..+ + ..++.+ .
T Consensus 1 dlli~n~~ivd~~~~~~~~~dI~I~~g~I~~ig~~~----~~~viDa~G~~v~PG~ID~H~Hi~~~--~-~~~~~~---~ 70 (552)
T TIGR01178 1 DIVIKNAKIIDVYNGEIIPGDIAIANGHIAGVGKYN----GVKVIDALGEYAVPGFIDAHIHIESS--M-LTPSEF---A 70 (552)
T ss_pred CEEEEeeEEEeCCCCcEEeeeEEEECCEEEEecCCC----CCeEEECCCCEEEeCeEecccccCCC--C-CChhHH---H
Confidence 47899999998654 35689999999999998742 46899999999999999999999876 2 234444 4
Q ss_pred HHHHhCCcEEEeccccCC-CCChHHHHHHHHHHhcccccccceeeee--e----cCChh--hHHHHHHHHHHcCCCEEEE
Q 009410 132 AAALAGGTTMHIDFVIPI-NGSLTAGFEAYEKKAKNSCMDYGFHMAI--T----KWDEV--VSDEMEVMVKEKGINSFKF 202 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~--~~~~~~~~~~~~g~~~ik~ 202 (535)
..++.+||||++++.... +....+.++.+.+.....++++.+..+. + ..++. ..+++.++.++.++.++|.
T Consensus 71 ~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~~~~~d~~~~~~s~vp~~~~e~~g~~~~~~~i~~~~~~~~V~glke 150 (552)
T TIGR01178 71 KLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAKKTPLNFYFMLPSCVPALQFETSGAVLTAEDIDELMELDEVLGLAE 150 (552)
T ss_pred HHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhhcCCcEEEEECCCCCCCCcccCCCCccCHHHHHHHHcCCCccEEEE
Confidence 667999999999874432 2245677777766655556665333321 1 11112 3567778776679999999
Q ss_pred EeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhc
Q 009410 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV 282 (535)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (535)
+++|++....+.+.++. ++.+++.|..+.+|++... .+.+..+.+.|..
T Consensus 151 ~m~~~~v~~~d~~~l~~-i~~a~~~g~~I~gHap~l~--~~eL~~~~~aGi~---------------------------- 199 (552)
T TIGR01178 151 VMDYPGVINADIEMLNK-INSARKRNKVIDGHCPGLS--GKLLNKYISAGIS---------------------------- 199 (552)
T ss_pred EecchhhcCCCHHHHHH-HHHHHhCCCEEEecCCCCC--HHHHHHHHHcCCC----------------------------
Confidence 99987644444555554 4889999999999997543 3344444444432
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHH--hcCC
Q 009410 283 NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAAL--ATGI 360 (535)
Q Consensus 283 ~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l--~~Gv 360 (535)
..|+.... ++...-.+.|+.+...-. +.. .+...+..++ ..+.
T Consensus 200 -----~dHe~~s~--~ea~e~~~~Gm~~~ir~g-------------------s~~---------~n~~~~~~~~~~~~~~ 244 (552)
T TIGR01178 200 -----NDHESTSI--EEAREKLRLGMKLMIREG-------------------SAA---------KNLEALHPLINEKNCR 244 (552)
T ss_pred -----CCcCcCCH--HHHHHHHHCCCEEEEeCC-------------------ccc---------cCHHHHHHHHhhcCCc
Confidence 45665544 333334557876653211 110 0112222222 3568
Q ss_pred eEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCcc
Q 009410 361 LQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDAD 440 (535)
Q Consensus 361 ~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~AD 440 (535)
+++++||... ..+ .+. +.++...++.+++. |+++++|++++|.|||+++|++ +.|+|++|+.||
T Consensus 245 ~~~l~TD~~~-~~~-------~~~------~g~l~~~v~~ai~~-g~~~~~Al~maT~npA~~lgl~-~~G~I~pG~~AD 308 (552)
T TIGR01178 245 SLMLCTDDRH-VND-------ILN------EGHINHIVRRAIEH-GVDPFDALQMASINPAEHFGID-VGGLIAPGDPAD 308 (552)
T ss_pred eEEEEeCCCC-hhH-------HHh------cCCHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHcCCC-CCcccCCCCcCC
Confidence 9999999421 111 111 12455556566554 6999999999999999999995 589999999999
Q ss_pred EEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC-----Ceec
Q 009410 441 IIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN-----DELN 492 (535)
Q Consensus 441 lvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~-----~~~~ 492 (535)
||+++... ..++..||++|++|.++ |+.+
T Consensus 309 lvvl~~l~-----------------------~~~v~~v~~~G~~v~~~~~~~~g~~~ 342 (552)
T TIGR01178 309 FVILKDLR-----------------------NFKVNKTYVKGKLLDLNEVFNDEISR 342 (552)
T ss_pred EEEECCCC-----------------------CceEEEEEECCEEEcccccccCCccc
Confidence 99998311 13789999999999997 7754
No 78
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.98 E-value=2.5e-31 Score=266.50 Aligned_cols=301 Identities=18% Similarity=0.164 Sum_probs=190.6
Q ss_pred ceEEecCCCEEeecccccccccccccCCCCc----hhhh-----HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHH
Q 009410 93 VKVLDATGKFVMPGGIDPHTHLAMEFMGSET----IDDF-----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK 163 (535)
Q Consensus 93 ~~vID~~G~~vlPGlID~H~H~~~~~~g~~~----~~~~-----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~ 163 (535)
+++||++|++|+|||||+|+|+......... ...+ ....+.++++||||++|++........+.++.....
T Consensus 1 ~~vID~~g~~v~PGliD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~g~~~~~~~~~~~~~g~~~ 80 (342)
T cd01299 1 AQVIDLGGKTLMPGLIDAHTHLGSDPGDLPLDLALPVEYRTIRATRQARAALRAGFTTVRDAGGADYGLLRDAIDAGLIP 80 (342)
T ss_pred CcEEeCCCCEECCCeeeeeeeccccCCCccccccCCHHHHHHHHHHHHHHHHhCCCcEEEeCCCcchHHHHHHHHcCCcc
Confidence 4689999999999999999998664111110 1111 245778899999999999754332223333333333
Q ss_pred hcccccccce---------------------eeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCC--------CCcCCH
Q 009410 164 AKNSCMDYGF---------------------HMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG--------SFMIND 214 (535)
Q Consensus 164 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~--------~~~~~~ 214 (535)
+++.+..... +.......++....++++. +.|++.+|+|.++.. ...++.
T Consensus 81 gPr~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~G~~~iK~~~~g~~~~~~~~~~~~~~~~ 159 (342)
T cd01299 81 GPRVFASGRALSQTGGHGDPRGLSGLFPAGGLAAVVDGVEEVRAAVREQL-RRGADQIKIMATGGVLSPGDPPPDTQFSE 159 (342)
T ss_pred CCceeecchhhcccCCCCccccccccccccCCcceecCHHHHHHHHHHHH-HhCCCEEEEeccCCcCCCCCCCcccCcCH
Confidence 3332111100 1111223455677788877 679999999986531 135789
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCH
Q 009410 215 ELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM 294 (535)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 294 (535)
+.++++++.|++.|+++.+|+.+...+...+ +. +.. .+.|+...
T Consensus 160 e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~l----~~-------------------------------G~~-~i~H~~~~ 203 (342)
T cd01299 160 EELRAIVDEAHKAGLYVAAHAYGAEAIRRAI----RA-------------------------------GVD-TIEHGFLI 203 (342)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc-------------------------------CCC-EEeecCCC
Confidence 9999999999999999999998754332222 11 222 47898877
Q ss_pred HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChh
Q 009410 295 DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNST 374 (535)
Q Consensus 295 ~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~ 374 (535)
+. +.++++++.|+.+++|+.....+...... ..+......+.. .........++.++++|+++++|||.......
T Consensus 204 ~~-~~~~~l~~~g~~~~~t~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~l~~~Gv~v~~GTD~~~~~~~ 278 (342)
T cd01299 204 DD-ETIELMKEKGIFLVPTLATYEALAAEGAA--PGLPADSAEKVA--LVLEAGRDALRRAHKAGVKIAFGTDAGFPVPP 278 (342)
T ss_pred CH-HHHHHHHHCCcEEeCcHHHHHHHHhhccc--cCCCHHHHHHHH--HHHHHHHHHHHHHHHcCCeEEEecCCCCCCCc
Confidence 76 88999999999888777643221100000 000000000000 00011235688899999999999996431110
Q ss_pred hhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceee
Q 009410 375 QKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEI 452 (535)
Q Consensus 375 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i 452 (535)
. . ++...+. .+. ..++++.++|+++|.|||+++|+++++|+|++||.|||||+|.|++.++
T Consensus 279 ~--------~----~~~~e~~----~~~-~~~~~~~~al~~~T~~~a~~~g~~~~~G~i~~G~~ADlvvl~~~pl~di 339 (342)
T cd01299 279 H--------G----WNARELE----LLV-KAGGTPAEALRAATANAAELLGLSDELGVIEAGKLADLLVVDGDPLEDI 339 (342)
T ss_pred h--------h----HHHHHHH----HHH-HhCCCHHHHHHHHHHHHHHHhCccCCcceECCCCcCCEEEECCChhhhh
Confidence 0 0 1111222 222 3469999999999999999999988899999999999999998876544
No 79
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=99.98 E-value=1.7e-30 Score=263.76 Aligned_cols=323 Identities=17% Similarity=0.166 Sum_probs=196.4
Q ss_pred eeeeEEEeCCEEEEeeCCCCCCC--CceEEecCCCEEeecccccccccccccC----------CC---------------
Q 009410 69 QIADVYVEDGIVVAVQPNINVGD--DVKVLDATGKFVMPGGIDPHTHLAMEFM----------GS--------------- 121 (535)
Q Consensus 69 ~~~~I~I~~G~I~~Vg~~~~~~~--~~~vID~~G~~vlPGlID~H~H~~~~~~----------g~--------------- 121 (535)
++++|+|+||+|++|++....+. +.++||++|++|+|||||+|+|+..... +.
T Consensus 2 ~~~~v~i~~g~I~~vg~~~~~~~~~~~~~iD~~g~~v~PGlin~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (377)
T TIGR01224 2 EDAVILIHGGKIVWIGQLAALPGEEATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGILST 81 (377)
T ss_pred CceEEEEECCEEEEEechhhCCcccCCeEEeCCCCEEcccEEecccCccccCCcHHHHHHHhCCCCHHHHHHhcCChHHH
Confidence 47899999999999998533232 5789999999999999999999975311 00
Q ss_pred ------CchhhhHH----HHHHHHhCCcEEEeccccCCC--CChHHHHHHHHHHhcccccccce--ee--eeec----CC
Q 009410 122 ------ETIDDFFS----GQAAALAGGTTMHIDFVIPIN--GSLTAGFEAYEKKAKNSCMDYGF--HM--AITK----WD 181 (535)
Q Consensus 122 ------~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~----~~ 181 (535)
.++++++. ....++++|||++-+...... ......++...+...+..+.... .. ..+. ..
T Consensus 82 ~~~~~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 161 (377)
T TIGR01224 82 VRATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTTFLGAHAVPPEFQGRP 161 (377)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeeecccCCccccCCH
Confidence 01111111 234568899999833211111 11122333333333222111111 00 0010 00
Q ss_pred hhhHH-----HHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009410 182 EVVSD-----EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP 256 (535)
Q Consensus 182 ~~~~~-----~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (535)
.+..+ .+++.....++.+++++.. ....+.+.+.++++.|+++|+++.+|+....... ..+.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~-~~~~~~------- 230 (377)
T TIGR01224 162 DDYVDGICEELIPQVAEEGLASFADVFCE---AGVFSVEQSRRILQAAQEAGLPVKLHAEELSNLG-GAELAA------- 230 (377)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeeEEEec---CCCcCHHHHHHHHHHHHHCCCCEEEEecCCCCCC-HHHHHH-------
Confidence 11111 1122221123666655432 2244678999999999999999999995432100 011111
Q ss_pred ccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccce
Q 009410 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336 (535)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (535)
..+ ...+.|+...++ ++++++++.|+.++.||..... .+..
T Consensus 231 ------------------------~~g-~~~~~H~~~~~~-~~l~~la~~g~~~~~~P~~~~~-------------l~~~ 271 (377)
T TIGR01224 231 ------------------------KLG-AVSADHLEHASD-AGIKALAEAGTVAVLLPGTTFY-------------LRET 271 (377)
T ss_pred ------------------------HcC-CCccHHHhcCCH-HHHHHHHhcCCEEEECchHHHh-------------cCCc
Confidence 112 123557776665 8899999999999988875211 1111
Q ss_pred eEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCC-CChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHH
Q 009410 337 YVMSPPIRASGHNKALQAALATGILQLVGTDHCA-FNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRL 415 (535)
Q Consensus 337 ~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~-~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~ 415 (535)
. .++++++++|+++++|||+.+ .+.. . .+...+.......++++++++++
T Consensus 272 ---~---------~p~~~l~~~Gv~v~lgTD~~~~~~~~---------~--------~~~~~~~~~~~~~~ls~~eal~~ 322 (377)
T TIGR01224 272 ---Y---------PPARQLIDYGVPVALATDLNPGSSPT---------L--------SMQLIMSLACRLMKMTPEEALHA 322 (377)
T ss_pred ---C---------ccHHHHHHCCCCEEEECCCCCCCChh---------H--------HHHHHHHHHHHhcCCCHHHHHHH
Confidence 1 238899999999999999644 2211 1 12222222333567999999999
Q ss_pred HhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEE
Q 009410 416 TSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRV 484 (535)
Q Consensus 416 ~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~ 484 (535)
+|.|||+++|+++++|+|++||.|||||+|.+++..+ |+... ..+|..||++||+
T Consensus 323 ~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~------------~~~~~--~~~v~~v~v~G~~ 377 (377)
T TIGR01224 323 ATVNAAYALGLGEERGTLEAGRDADLVILSAPSYAEI------------PYHYG--VNHVHAVIKNGNI 377 (377)
T ss_pred HHHHHHHHhCCCCCceeeCCCCcCCEEEEcCCChHHh------------hhhcC--CCCceEEEECCCC
Confidence 9999999999987799999999999999998866333 22211 2489999999984
No 80
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.98 E-value=5.6e-31 Score=264.94 Aligned_cols=343 Identities=15% Similarity=0.066 Sum_probs=208.0
Q ss_pred CEEEEeeCCCCC---CCCceEEecCCCEEeecccccccccccccC-CCC-------------------chhhhH----HH
Q 009410 78 GIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GSE-------------------TIDDFF----SG 130 (535)
Q Consensus 78 G~I~~Vg~~~~~---~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~~-------------------~~~~~~----~~ 130 (535)
|+|++||+.... .++.+++|+.|++|+|||||+|+|+++... +.. ++++.+ .+
T Consensus 1 ~~I~aVG~~~~~~~~~~~~~v~d~~g~~v~PGlVnaH~H~~~~~~rg~~~~~~~~~wl~~~~~~~~~~~~e~~~~~a~~~ 80 (381)
T cd01312 1 DKILEVGDYEKLEKRYPGAKHEFFPNGVLLPGLINAHTHLEFSANVAQFTYGRFRAWLLSVINSRDELLKQPWEEAIRQG 80 (381)
T ss_pred CeEEEECChHHHHhhcCCCeEEecCCcEEecCccccccccchhccccccCCCchHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence 699999984321 235789999999999999999999976622 111 111111 22
Q ss_pred HHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChhhH-HHHHHHHHH--cCCCEEEEEeecC
Q 009410 131 QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVS-DEMEVMVKE--KGINSFKFFMAYK 207 (535)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~g~~~ik~~~~~~ 207 (535)
..+++++||||+.|+... ....+...+.+-+..+.+.+.........+.. +.+....+. ...+.++..+.++
T Consensus 81 ~~E~l~~G~Tt~~d~~~~-----~~~~~a~~~~GiR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 155 (381)
T cd01312 81 IRQMLESGTTSIGAISSD-----GSLLPALASSGLRGVFFNEVIGSNPSAIDFKGETFLERFKRSKSFESQLFIPAISPH 155 (381)
T ss_pred HHHHHHhCCeEEEEecCC-----HHHHHHHHHcCCcEEEEEeeECCCCchhhhhHHHHHHHHHHhhccCccceEEEECCC
Confidence 344588999999998633 12455555555554443332211111011111 112222211 1234577777888
Q ss_pred CCCcCCHHHHHHHHHHHHhcCCeEEEEcCC-hhhHHHHHHH-------HHHcCCCCcccccccCChhhHHHHHHHHHHHH
Q 009410 208 GSFMINDELLIEGFKRCKSLGALAMVHAEN-GDAVFEGQKR-------MIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (535)
Q Consensus 208 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~-~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (535)
....++++.++++.+.|+++++++++|+.+ ..+.....+. +...+... .+..... .++ .++..
T Consensus 156 a~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~~~~~~--~~~~g~~------pv~-~l~~~ 226 (381)
T cd01312 156 APYSVHPELAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFWESFLKLP--KPKKLAT------AID-FLDML 226 (381)
T ss_pred CCcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHHHHHHHhccchhhHhhhhcccc--cccCCCC------HHH-HHHHc
Confidence 888889999999999999999999999844 4333322211 00000000 0000000 122 22323
Q ss_pred HhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcC
Q 009410 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG 359 (535)
Q Consensus 280 ~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~G 359 (535)
...+.++.+.|+...++ ++++++++.|+.++.||..+ +..+... .++.+++++|
T Consensus 227 g~L~~~~~~~H~~~l~~-~~~~~l~~~g~~v~~~P~sn-------------~~lg~g~------------~p~~~~~~~G 280 (381)
T cd01312 227 GGLGTRVSFVHCVYANL-EEAEILASRGASIALCPRSN-------------RLLNGGK------------LDVSELKKAG 280 (381)
T ss_pred CCCCCCcEEEECCcCCH-HHHHHHHHcCCeEEECcchh-------------hhhcCCC------------cCHHHHHHCC
Confidence 34567889999999887 88999999999999998752 1122211 2389999999
Q ss_pred CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCc
Q 009410 360 ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDA 439 (535)
Q Consensus 360 v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~A 439 (535)
+++++|||+...+...+ .|. ++++.....+.. ...+++.++|+++|.|+|+++|++ .|+|++||+|
T Consensus 281 v~v~lGtD~~~~~~~~d-----~~~------~~~~~~~~~~~~-~~~~~~~~~l~~aT~~gA~alg~~--~Gsle~Gk~A 346 (381)
T cd01312 281 IPVSLGTDGLSSNISLS-----LLD------ELRALLDLHPEE-DLLELASELLLMATLGGARALGLN--NGEIEAGKRA 346 (381)
T ss_pred CcEEEeCCCCccCCCCC-----HHH------HHHHHHHhcccc-cccCCHHHHHHHHHHHHHHHhCCC--CCccCCCCcc
Confidence 99999999654322211 111 222222211110 112688999999999999999994 8999999999
Q ss_pred cEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCE
Q 009410 440 DIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGR 483 (535)
Q Consensus 440 Dlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr 483 (535)
|||++|.+.+. .+. .+.. ...+. .++|+.|||+||
T Consensus 347 Dlvv~d~~~~~-~~~---~~~~-~~~~~----~~~v~~v~v~G~ 381 (381)
T cd01312 347 DFAVFELPGPG-IKE---QAPL-QFILH----AKEVRHLFISGK 381 (381)
T ss_pred cEEEEeCCCcC-CCC---ccHH-HHHHc----cCCCCEEEecCC
Confidence 99999987651 111 1111 11121 358999999996
No 81
>PRK09237 dihydroorotase; Provisional
Probab=99.98 E-value=5.7e-30 Score=259.51 Aligned_cols=351 Identities=21% Similarity=0.207 Sum_probs=209.8
Q ss_pred EEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHH
Q 009410 55 ILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (535)
Q Consensus 55 ~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~ 132 (535)
++|+|++|+|+.. ...++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+... +..... ...+
T Consensus 1 ~~i~~~~v~d~~~~~~~~~~v~i~~g~I~~v~~~~~~~~~~~~iD~~g~~v~PG~iD~H~H~~~~--~~~~~~---~~~~ 75 (380)
T PRK09237 1 LLLRGGRVIDPANGIDGVIDIAIEDGKIAAVAGDIDGSQAKKVIDLSGLYVSPGWIDLHVHVYPG--STPYGD---EPDE 75 (380)
T ss_pred CEEEeEEEECCCCCcccceEEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEEeeecCCCC--CCccCC---CHHH
Confidence 4799999999765 35689999999999998865444467899999999999999999999854 211111 3356
Q ss_pred HHHhCCcEEEeccccCCCCChHHHHHHHHHH-hc--ccccccceeeeeec-C--C--hhhHHHHHHHHHH--cCCCEEEE
Q 009410 133 AALAGGTTMHIDFVIPINGSLTAGFEAYEKK-AK--NSCMDYGFHMAITK-W--D--EVVSDEMEVMVKE--KGINSFKF 202 (535)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~-~--~--~~~~~~~~~~~~~--~g~~~ik~ 202 (535)
.++.+||||++|+............+...+. +. ..+++++++..... . + .-..++++++..+ .+..++|.
T Consensus 76 ~~~~~G~Ttv~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~glk~ 155 (380)
T PRK09237 76 VGVRSGVTTVVDAGSAGADNFDDFRKLTIEASKTRVLAFLNISRIGLLAQDELADLEDIDADAVAEAVKRNPDFIVGIKA 155 (380)
T ss_pred HHHhCCcCEEEECCCCCCCCHHHHHHHHHhhhCcEEEEEEeeecccccccchhcCHhHCCHHHHHHHHHhCcCcEEEEEE
Confidence 7899999999998754443333333333332 21 13333333322211 1 1 1133455555532 46788898
Q ss_pred EeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhc
Q 009410 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV 282 (535)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (535)
++.+........+.++.....+.+.|+++.+|++........+. ++...
T Consensus 156 ~~~~~v~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~l~------------------------------~~l~~- 204 (380)
T PRK09237 156 RMSSSVVGDNGIEPLELAKAIAAEANLPLMVHIGNPPPSLEEIL------------------------------ELLRP- 204 (380)
T ss_pred EEecccccccCCchHHHHHHHHHhcCCCEEEEcCCCCCCHHHHH------------------------------hhccC-
Confidence 87654221111133444444455899999999965432111111 11111
Q ss_pred CCCEEEEEccCHHH----------HHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHH
Q 009410 283 NTPLYVVHVMSMDA----------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKAL 352 (535)
Q Consensus 283 ~~~~~~~H~~~~~~----------~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~ 352 (535)
+ ..+.|+..... .+......+.|+.+..... ... ......
T Consensus 205 g--~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~~G~~~~ig~g-------------------~~~---------~~~~~~ 254 (380)
T PRK09237 205 G--DILTHCFNGKPNRILDEDGELRPSVLEALERGVRLDVGHG-------------------TAS---------FSFKVA 254 (380)
T ss_pred C--CEEEecCCCCCCCccCCCCcchHHHHHHHHCCEEEEecCC-------------------CCc---------ccHHHH
Confidence 1 13566654321 1344555667766543211 000 011335
Q ss_pred HHHHhcCC-eEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCc
Q 009410 353 QAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKG 431 (535)
Q Consensus 353 ~~~l~~Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~G 431 (535)
..++++|+ +.+++||..+..... .| ...+...++.+.+ .+++++++++++|.|||++||+ ++.|
T Consensus 255 ~~l~~~g~~~~~l~tD~~~~~~~~----------~~---~~~l~~~~~~~~~-~g~~~~~al~~aT~n~A~~lgl-~~~G 319 (380)
T PRK09237 255 EAAIAAGILPDTISTDIYCRNRIN----------GP---VYSLATVMSKFLA-LGMPLEEVIAAVTKNAADALRL-PELG 319 (380)
T ss_pred HHHHHCCCCceEEECCCCCCCccc----------ch---HhHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHcCC-CCCC
Confidence 56778885 569999965432110 00 1123334434443 4699999999999999999999 6789
Q ss_pred cccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeec
Q 009410 432 AILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELN 492 (535)
Q Consensus 432 sI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~ 492 (535)
+|++||.|||++++.+... .+ +.+......+.+. ...|+.||++||+||.+-..+
T Consensus 320 ~l~~G~~ADlvv~~~~~~~-~~---~~d~~~~~~~~~~--~~~~~~~~v~G~~~~~~~~~~ 374 (380)
T PRK09237 320 RLQVGSDADLTLFTLKDGP-FT---LTDSEGDSLIGER--LLTPLATVRGGKVVLTEQGSA 374 (380)
T ss_pred cCCCCCcCCEEEEeCCCCC-cc---ccCCCCCEEEecC--CCcceEEEECCEEEEccCccc
Confidence 9999999999999965432 11 1122112222211 248999999999999874433
No 82
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=99.97 E-value=3.5e-30 Score=261.07 Aligned_cols=318 Identities=21% Similarity=0.191 Sum_probs=198.3
Q ss_pred EEEeCCEEEEeeCCCCCC----CCceEEecCCCEEeecccccccccccccC----------CC-----------------
Q 009410 73 VYVEDGIVVAVQPNINVG----DDVKVLDATGKFVMPGGIDPHTHLAMEFM----------GS----------------- 121 (535)
Q Consensus 73 I~I~~G~I~~Vg~~~~~~----~~~~vID~~G~~vlPGlID~H~H~~~~~~----------g~----------------- 121 (535)
|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+..... +.
T Consensus 1 i~i~~g~I~~ig~~~~~~~~~~~~~~~iD~~G~~v~Pg~vn~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (371)
T cd01296 1 IAIRDGRIAAVGPAASLPAPGPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTVR 80 (371)
T ss_pred CEEECCEEEEEeCchhcccccCCCceEEECCCCEEecceeecCCCCcCCCCcHHHHHHHHCCCCHHHHHHcCCChHHHHH
Confidence 689999999999854332 45789999999999999999999976411 10
Q ss_pred ----CchhhhH----HHHHHHHhCCcEEEeccccCC--CCChHHHHHHHHHHhcccccccc--eeeeeecC-----Chhh
Q 009410 122 ----ETIDDFF----SGQAAALAGGTTMHIDFVIPI--NGSLTAGFEAYEKKAKNSCMDYG--FHMAITKW-----DEVV 184 (535)
Q Consensus 122 ----~~~~~~~----~~~~~~l~~GvTtv~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~ 184 (535)
.++++++ .....++++|||++.+..... .....+.++...+...+..+.+. +....... ..+.
T Consensus 81 ~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~~~~~p~~~~~~~~~ 160 (371)
T cd01296 81 ATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLGAHAVPPEYKGREEY 160 (371)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeeecccCCcccCChHHH
Confidence 0112222 234456889999998842111 11123344444443332111211 11000111 0111
Q ss_pred ----HHHHHH-HHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 185 ----SDEMEV-MVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 185 ----~~~~~~-~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
.+++.+ .....+..+++++... ...+.+.++++++.|+++|+++.+|+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~~---------------- 221 (371)
T cd01296 161 IDLVIEEVLPAVAEENLADFCDVFCEK---GAFSLEQSRRILEAAKEAGLPVKIHADELSNIGG---------------- 221 (371)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEeecC---CccCHHHHHHHHHHHHHCCCeEEEEEcCcCCCCH----------------
Confidence 111211 1113556777775322 2346899999999999999999999965321100
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (535)
+..+ ...+. ..+.|+...+. +.++++++.|+.+..||..+.. .+..
T Consensus 222 ------------~~~~----~~~g~-~~i~H~~~~~~-~~i~~la~~g~~v~~~P~~~~~-------------l~~~--- 267 (371)
T cd01296 222 ------------AELA----AELGA-LSADHLEHTSD-EGIAALAEAGTVAVLLPGTAFS-------------LRET--- 267 (371)
T ss_pred ------------HHHH----HHcCC-CeeHHhcCCCH-HHHHHHHHcCCeEEEChHHHHH-------------hCCC---
Confidence 0111 11222 23567776665 8899999999999988875321 1111
Q ss_pred cCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHH
Q 009410 340 SPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTE 419 (535)
Q Consensus 340 ~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~ 419 (535)
.+ ++++++++|+++++|||+.|..... ..+...+..++...+++++++++++|.|
T Consensus 268 ~~---------~~~~l~~~Gv~v~lgsD~~p~~~~~----------------~~l~~~~~~~~~~~~l~~~~al~~aT~~ 322 (371)
T cd01296 268 YP---------PARKLIDAGVPVALGTDFNPGSSPT----------------SSMPLVMHLACRLMRMTPEEALTAATIN 322 (371)
T ss_pred CC---------CHHHHHHCCCcEEEecCCCCCCChH----------------HHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 12 2889999999999999974432211 1122223233445679999999999999
Q ss_pred HHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECC
Q 009410 420 CARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGG 482 (535)
Q Consensus 420 ~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~G 482 (535)
||+++|+++++|+|++||.|||||+|.+++..+ ++... ..+|+.||++|
T Consensus 323 ~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~------------~~~~~--~~~v~~v~~~G 371 (371)
T cd01296 323 AAAALGLGETVGSLEVGKQADLVILDAPSYEHL------------AYRFG--VNLVEYVIKNG 371 (371)
T ss_pred HHHHhCCCCCceeeCCCCCcCEEEECCCchHhh------------hhhcC--CCCceEEEeCc
Confidence 999999987899999999999999998876433 11111 23699999998
No 83
>PLN02303 urease
Probab=99.97 E-value=9.9e-30 Score=264.58 Aligned_cols=355 Identities=17% Similarity=0.259 Sum_probs=214.0
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCC------------CCCceEEecCCCEEeecccccccccccccC
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~------------~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 119 (535)
..+++|+|++|+|..+...++|+|+||||++|++.... ..+.++||++|++|+|||||+|+|+..+
T Consensus 333 ~~DlVItNa~IID~~Gi~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGlIVtPG~ID~HVHf~~P-- 410 (837)
T PLN02303 333 SLDTVITNAVIIDYTGIYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGMIVTAGGIDCHVHFICP-- 410 (837)
T ss_pred cCCEEEeCeEEECCCCcEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCCEEEeCEEEeecCCCCC--
Confidence 56899999999996667788999999999999974211 1247899999999999999999998654
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCC-----CC---ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPI-----NG---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (535)
+. ...++++||||+++++... .. .....++...+......++++++... +....+++.++
T Consensus 411 g~---------~~eaLasGVTTai~GGtgp~pnT~ptt~t~g~e~I~~~L~aa~~~pvn~Gf~gkG---~~s~l~eL~el 478 (837)
T PLN02303 411 QL---------ATEAIASGITTLVGGGTGPAHGTCATTCTPAPSHMKLMLQSTDDLPLNFGFTGKG---NTAKPEGLHEI 478 (837)
T ss_pred cH---------HHHHHHHhHHHHHhcCCCCCCcccCcCCCCCHHHHHHHHHhcccCCCcEEEEccC---cccCHHHHHHH
Confidence 21 2567888888888764321 00 13566666666655566777776532 22345566666
Q ss_pred HHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhh---HHHHHHH--------HHHcCCCCccccc
Q 009410 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA---VFEGQKR--------MIELGITGPEGHA 260 (535)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~---~~~~~~~--------~~~~g~~~~~~~~ 260 (535)
. +.|+.++|.+.. +..+++.+.++++.|+++++++++|+++..+ +....+. +...|+.+ +|.
T Consensus 479 i-eaGa~GfK~h~d----~gvTpelL~raLe~AkelGVpVaIHAEdLnE~G~vE~t~~a~G~RpIh~~h~~Ga~g--gha 551 (837)
T PLN02303 479 I-KAGAMGLKLHED----WGTTPAAIDNCLDVAEEYDIQVTIHTDTLNESGCVEHSIAAFKGRTIHTYHSEGAGG--GHA 551 (837)
T ss_pred H-HcCcEEEEECCC----CCCCHHHHHHHHHHHHHcCCEEEEecCcccccchHHHHHHHHCCChHHHHHhcCCCC--CCC
Confidence 6 679999987532 3467999999999999999999999987544 3323222 22223222 221
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH---HHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcccccee
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD---AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (535)
|+. ++.+.+.+ ++....++. ....++... .+-.+ +|++ ++...++.-|.
T Consensus 552 ---pdi---------~~~~~~~n---vlpsstnpt~p~t~nt~~e~~--dm~m~----~h~l--~~~~~edvafa----- 603 (837)
T PLN02303 552 ---PDI---------IKVCGVKN---VLPSSTNPTRPYTKNTIDEHL--DMLMV----CHHL--DKNIPEDVAFA----- 603 (837)
T ss_pred ---cHH---------HHhcCCCC---ccCCCCCCCCCCccCchhhhc--CeEEe----ecCC--CCCCcchhhhh-----
Confidence 211 11111111 111111100 001111111 11111 1222 11111111111
Q ss_pred EEcCCCCCcccHHHHH-HHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh-----------cC
Q 009410 338 VMSPPIRASGHNKALQ-AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE-----------SG 405 (535)
Q Consensus 338 ~~~p~~r~~~~~~~~~-~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~-----------~~ 405 (535)
..|....+.+.. -+++.|+...++||+..-..-.. ... ..+.. ..++.. ..
T Consensus 604 ----~srir~~tiaaed~l~d~G~~s~~~SDs~amgr~ge-----~i~-------r~~q~-A~k~~~~~g~l~~~~~~~d 666 (837)
T PLN02303 604 ----ESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGE-----VIT-------RTWQT-AHKMKSQRGALEPRGADND 666 (837)
T ss_pred ----hhhccchhhccchhhhccCCEEEEeccchhhCcccc-----eee-------ehHHH-HHHHHHhcCCCCCcccccc
Confidence 111111222222 35667999999999753221110 000 00111 111111 13
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEE
Q 009410 406 QISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVV 485 (535)
Q Consensus 406 ~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V 485 (535)
..+..++|++.|+|||+++|+++++|+|++||.||||||+.+.+ ..++.+||++|++|
T Consensus 667 n~rv~~aL~~~TiN~A~AlG~~~~vGSLe~GK~ADlVvw~~~~f----------------------g~~~~~vi~~G~iv 724 (837)
T PLN02303 667 NFRIKRYIAKYTINPAIAHGMSHFVGSVEVGKLADLVLWKPAFF----------------------GAKPEMVIKGGQIA 724 (837)
T ss_pred ccCHHHHHHHHhHHHHHHCCcccCceeeCCCcccCEEEeccccc----------------------CCCeeEEEECCEEE
Confidence 35679999999999999999999999999999999999996532 13789999999999
Q ss_pred EEC-Ceeccc
Q 009410 486 WEN-DELNVV 494 (535)
Q Consensus 486 ~~~-~~~~~~ 494 (535)
|.. |.....
T Consensus 725 y~~~gd~nas 734 (837)
T PLN02303 725 WAQMGDPNAS 734 (837)
T ss_pred EccCCCcccc
Confidence 997 555444
No 84
>PRK07583 cytosine deaminase-like protein; Validated
Probab=99.97 E-value=1.5e-29 Score=260.24 Aligned_cols=358 Identities=19% Similarity=0.200 Sum_probs=214.5
Q ss_pred cccEEEEccEEEcC------------CCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC
Q 009410 52 SSKILIKGGTVVNA------------HHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (535)
Q Consensus 52 ~~~~vi~n~~vi~~------------~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 119 (535)
+..+.|+|+++-+. +.....+|.|+||+|++|++....+.+.++||++|++|+|||||+|+|+...+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~~~~~~~id~~g~~v~Pg~id~H~Hld~~~~ 89 (438)
T PRK07583 10 SGRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGAPDELPAVDLKGRMVWPCFVDMHTHLDKGHI 89 (438)
T ss_pred CCcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCCCCCCceecCCCCcccCCcccceecccccee
Confidence 56689999886331 122467999999999999987643446889999999999999999999866411
Q ss_pred CC-----------------------Cchhh----hHHHHHHHHhCCcEEEeccccC-CC--CChHHHHHHHHHHhccc--
Q 009410 120 GS-----------------------ETIDD----FFSGQAAALAGGTTMHIDFVIP-IN--GSLTAGFEAYEKKAKNS-- 167 (535)
Q Consensus 120 g~-----------------------~~~~~----~~~~~~~~l~~GvTtv~d~~~~-~~--~~~~~~~~~~~~~~~~~-- 167 (535)
.. .+.++ +......++.+|+|+++..... .. ....+.+....+.....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd~~~~~~~~~~~~i~~~~~~~~~~~~ 169 (438)
T PRK07583 90 WPRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHLDSFAPQAAISWEVFAELREAWAGRIA 169 (438)
T ss_pred cCCCCCCCCCHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeeeccCCCCcccHHHHHHHHHHHhhccCe
Confidence 00 01222 3455667789999977654331 11 11222232222222111
Q ss_pred ---ccccceeeeeecCChhhHHHHHHHHHHc-CCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC-hhhHH
Q 009410 168 ---CMDYGFHMAITKWDEVVSDEMEVMVKEK-GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GDAVF 242 (535)
Q Consensus 168 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~-~~~~~ 242 (535)
...++++..... ..+++.+.+.+. |..+.+.+.. + -..+.+.++++.|+++|+++.+|+.. .....
T Consensus 170 ~~~v~~~p~~~~~~~----~~~eL~~~v~~~~gv~g~~~~~~----~-~~d~~l~~i~~lA~~~G~~v~vH~~E~~~~~~ 240 (438)
T PRK07583 170 LQAVSLVPLDAYLTD----AGERLADLVAEAGGLLGGVTYMN----P-DLDAQLDRLFRLARERGLDLDLHVDETGDPAS 240 (438)
T ss_pred EEEEEecChhhccCc----hHHHHHHHHHHcCCEEeCCCCCC----C-CHHHHHHHHHHHHHHhCCCcEEeECCCCCchH
Confidence 111222221111 124455544232 2333222211 1 15688999999999999999999943 22211
Q ss_pred HHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhc--CCCEEEEEccCHHH------HHHHHHHHHcCCcEEecc
Q 009410 243 EGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV--NTPLYVVHVMSMDA------MEEIAKARKAGQRVIGEP 314 (535)
Q Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~H~~~~~~------~~~~~~~~~~g~~v~~~~ 314 (535)
... ....+..... ..++++.|+..... .+.++++++.|+.++.||
T Consensus 241 ~~l---------------------------~~~~~~~~~~G~~~~v~i~H~~~l~~~~~~~~~~~i~~la~~gv~vv~~P 293 (438)
T PRK07583 241 RTL---------------------------KAVAEAALRNGFEGKVTCGHCCSLAVQPEEQAQATIALVAEAGIAIVSLP 293 (438)
T ss_pred HHH---------------------------HHHHHHHHHhCCCCCEEEEeccchhcCCHHHHHHHHHHHHHcCCeEEECc
Confidence 111 1111111122 24688999976431 377999999999999998
Q ss_pred ccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHH
Q 009410 315 VVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERM 394 (535)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l 394 (535)
............ ..|.. ....++++++++|+++++|||+...... +|.+.. .++ .+
T Consensus 294 ~~~~~l~~~~~~------------~~p~~---~~~~~v~~l~~aGV~valGtD~~~d~~~-------p~g~~~-~~~-~~ 349 (438)
T PRK07583 294 MCNLYLQDRQPG------------RTPRW---RGVTLVHELKAAGIPVAVASDNCRDPFY-------AYGDHD-MLE-VF 349 (438)
T ss_pred chhhhhcCCCcC------------CCCCC---CCcchHHHHHHCCCeEEEEeCCCCCCCC-------CCCCcC-HHH-HH
Confidence 753221111000 00111 1124588999999999999997532111 111000 111 11
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeE
Q 009410 395 HLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGK 474 (535)
Q Consensus 395 ~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~ 474 (535)
.... ... ..+.++.++|+++|.|||+++|+++ +|+|++||.|||||+|.+++..+.. . ...
T Consensus 350 ~~a~-~~~-~~~~~~~~al~~~T~~~A~~lg~~~-~G~i~~G~~ADlvv~d~~~~~~~~~----~------------~~~ 410 (438)
T PRK07583 350 REAV-RIL-HLDHPYDDWPAAVTTTPADIMGLPD-LGRIAVGAPADLVLFKARSFSELLS----R------------PQS 410 (438)
T ss_pred HHHH-HHH-hcCCcHHHHHHHHhHHHHHHcCCCC-CCCcCCCCCCCEEEEcCCCHHHHHh----c------------CCC
Confidence 1111 111 2357899999999999999999965 8999999999999999987644311 0 235
Q ss_pred EEEEEECCEEEEEC
Q 009410 475 VEVTIAGGRVVWEN 488 (535)
Q Consensus 475 v~~v~~~Gr~V~~~ 488 (535)
++.||++|++|.+.
T Consensus 411 ~~~V~~~G~~v~~~ 424 (438)
T PRK07583 411 DRIVLRAGKPIDTT 424 (438)
T ss_pred ccEEEECCEEeccc
Confidence 77899999988755
No 85
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=99.97 E-value=1.9e-28 Score=249.42 Aligned_cols=359 Identities=19% Similarity=0.214 Sum_probs=205.7
Q ss_pred EEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCC--CCceEEecCCCEEeecccccccccccccCC-CCchhhhHHHH
Q 009410 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG--DDVKVLDATGKFVMPGGIDPHTHLAMEFMG-SETIDDFFSGQ 131 (535)
Q Consensus 55 ~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~--~~~~vID~~G~~vlPGlID~H~H~~~~~~g-~~~~~~~~~~~ 131 (535)
++|+|++|++++...+++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+...... ...........
T Consensus 2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~v~~~~~~~~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~~~~~~~~~~~~ 81 (387)
T cd01308 2 TLIKNAEVYAPEYLGKKDILIAGGKILAIEDQLNLPGYENVTVVDLHGKILVPGFIDQHVHIIGGGGEGGPSTRTPEVTL 81 (387)
T ss_pred EEEECcEEeCCCCccceEEEEECCEEEEEeCCcccccCCCCeEEECCCCEEccCeeehhhCcccccCCCcccccCHHHHH
Confidence 579999999977667889999999999999865332 357899999999999999999998653100 01112222345
Q ss_pred HHHHhCCcEEEeccccCCCC-ChH----HHHHHHHHHhcccccccceeeeee-cCChhhHHHHHHHHHHcCCCEEEEEee
Q 009410 132 AAALAGGTTMHIDFVIPING-SLT----AGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVSDEMEVMVKEKGINSFKFFMA 205 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (535)
..++++|+||++|+...... ... ...+...+.+-+.+...+++.... ...+....++.......+. +. ....
T Consensus 82 ~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-g~-~~~~ 159 (387)
T cd01308 82 SDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGITCFVYTGSYEVPTRTITGSIRKDLLLIDKVIGV-GE-IAIS 159 (387)
T ss_pred HHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCcCchhhHHHHHHHHHHhcCc-ce-EEEc
Confidence 67799999999998733221 112 223333334444333322221000 0011111122221111221 11 1112
Q ss_pred cCCCCcCCHHHHHHHHHHHHhcCC------eEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHH
Q 009410 206 YKGSFMINDELLIEGFKRCKSLGA------LAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (535)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~~g~------~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (535)
...........+.++...++..+. .+++|..... ..+.+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~~------------------------------~~~~~i~~~~ 209 (387)
T cd01308 160 DHRSSQPTVEELARIAAEARVGGLLGGKAGIVHIHLGDGK------------------------------RALSPIFELI 209 (387)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCch------------------------------HHHHHHHHHH
Confidence 222334567777778777775433 3566664221 1233344444
Q ss_pred HhcCCCE-EEEEccCHHHHH---HHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHH
Q 009410 280 EFVNTPL-YVVHVMSMDAME---EIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAA 355 (535)
Q Consensus 280 ~~~~~~~-~~~H~~~~~~~~---~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~ 355 (535)
++.|.++ ++.|.......+ ......+.|..+-...... ..+...|+. .....++.+
T Consensus 210 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~i~~~~~-----------------~~~~~~~~~---~~~~~l~~~ 269 (387)
T cd01308 210 EETEIPITQFLPTHINRTAPLFEQGVEFAKMGGTIDLTSSID-----------------PQFRKEGEV---RPSEALKRL 269 (387)
T ss_pred HhcCCCcceeECCcccCCHHHHHHHHHHHHcCCcEEEECCCC-----------------ccccccCcc---ChHHHHHHH
Confidence 5545544 444443332222 1223444565443221100 000011111 124668888
Q ss_pred HhcCC---eEEEeCCCCCCChhhhhcCCCCcccCcc-hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCc
Q 009410 356 LATGI---LQLVGTDHCAFNSTQKAFGIDDFRKIPN-GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKG 431 (535)
Q Consensus 356 l~~Gv---~~~lgtD~~~~~~~~~~~~~~~~~~~~~-g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~G 431 (535)
+++|+ +++++||+......... .+.+..... +.+..+..+. .+++.+++|++++++++|.|||+++|+++ +|
T Consensus 270 ~~~g~~~d~i~l~TD~~~~~p~~~~--~g~~~~~g~~~~~~~~~~~~-~~v~~~~i~~~~al~~~T~npA~~lg~~~-~G 345 (387)
T cd01308 270 LEQGVPLERITFSSDGNGSLPKFDE--NGNLVGLGVGSVDTLLREVR-EAVKCGDIPLEVALRVITSNVARILKLRK-KG 345 (387)
T ss_pred HHhCCCCCcEEEEECCCCCcccCcc--CCeEEecCcCcHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHHHhCCCC-CC
Confidence 99986 37999997422100000 001110001 3343333333 56667789999999999999999999954 89
Q ss_pred cccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeeccc
Q 009410 432 AILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 494 (535)
Q Consensus 432 sI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~ 494 (535)
+|++|+.|||+|+|.+ .++..|+++|++|+++|++...
T Consensus 346 ~i~~G~~ADlvv~d~~-------------------------~~~~~~~~~G~~v~~~~~~~~~ 383 (387)
T cd01308 346 EIQPGFDADLVILDKD-------------------------LDINSVIAKGQIMVRNGKLLVK 383 (387)
T ss_pred CcCCCCcCCEEEEcCC-------------------------CCEEEEEECCEEEEECCeEeec
Confidence 9999999999999965 1678899999999999998764
No 86
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=99.97 E-value=1.8e-29 Score=250.82 Aligned_cols=318 Identities=16% Similarity=0.152 Sum_probs=231.9
Q ss_pred eecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHH-HHHhccc-ccccceeeeeecC
Q 009410 104 MPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAY-EKKAKNS-CMDYGFHMAITKW 180 (535)
Q Consensus 104 lPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~ 180 (535)
+||+||+|+|+..+ +.+.+..+++.++| |++++|....+. ...+.++.. .+..... +.++.++......
T Consensus 3 ~Pg~iD~h~h~~~~-------~~~~~~~~aa~~gG-Ttvv~mpnt~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 74 (335)
T cd01294 3 IPRPDDMHLHLRDG-------AMLKLVLPYTARGF-SRAIVMPNLKPPVTTTADALAYRERILAADPGPNFTPLMTLYLT 74 (335)
T ss_pred CCCcceeEecCCCc-------hHHHHHHHHHHhCC-CEEEECCCCCCCCCCHHHHHHHHHHHHhcCCCCcEEEEEEEecc
Confidence 79999999998742 77888899999999 999999754332 223323333 3333333 4555554444222
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecC----CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP 256 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~----~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (535)
.....+++.++.+..|+.++|+|+... +....+.+.+..+++.+.+.|+++.+|+++......
T Consensus 75 ~~~~~~el~~~~~~~G~~g~Klf~~~~~~~~~~~~~d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~~------------- 141 (335)
T cd01294 75 ENTTPEELREAKKKGGIRGVKLYPAGATTNSQGGVTDLEKIYPVLEAMQKLGMPLLVHGEVPDFKID------------- 141 (335)
T ss_pred CCCCHHHHHHHHHhCCceEEEEecCCCccCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCCCccccc-------------
Confidence 222356777776344999999986421 111235688999999999999999999987543110
Q ss_pred ccccccCChhhHHHHHHHHHHHHHhc-CCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccc
Q 009410 257 EGHALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA 335 (535)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (535)
+...+.+.+.++..+++++ +.++|+.|+++.+.++.++.+++ +|++++++||++++.+.+.... .+.
T Consensus 142 -------~~~~e~~~~~~~~~lA~~~p~~~v~i~Hvst~~~~~~i~~ak~---~vt~Et~ph~L~l~~~~~~~~~--~g~ 209 (335)
T cd01294 142 -------VLDREAKFIPVLEPLAQRFPKLKIVLEHITTADAVEYVKSCNE---NVAATITPHHLLLTRDDLLGGG--LNP 209 (335)
T ss_pred -------chhhHHHHHHHHHHHHHHcCCCeEEEecccHHHHHHHHHhCCC---CcEEEEchhHheeeHHHhcCCC--CCC
Confidence 0011123345677888875 99999999999888777765543 7999999999999988764311 257
Q ss_pred eeEEcCCCCCcccHHHHHHHHhcCCeE-EEeCCCCCCChhhhhcCCCCcccCcc--hHHHHHHHHHHHHHhcCCCCHHHH
Q 009410 336 KYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPN--GIEERMHLVWDTMVESGQISVTDY 412 (535)
Q Consensus 336 ~~~~~p~~r~~~~~~~~~~~l~~Gv~~-~lgtD~~~~~~~~~~~~~~~~~~~~~--g~~~~l~~~~~~~~~~~~ls~~ea 412 (535)
.++++||+|...+++++|+.+++|... .++|||+|+....+.. ++. .++ +++..++.++ ..++ +++|++++
T Consensus 210 ~~k~~PPlR~~~d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~~---~~g-~~Gi~~~~~~l~~~~-~~~~-~~l~l~~~ 283 (335)
T cd01294 210 HLYCKPVAKRPEDREALRKAATSGHPKFFLGSDSAPHPKSNKES---SCG-CAGIFSAPIALPYLA-EVFE-EHNALDKL 283 (335)
T ss_pred CeEEcCCCCCHHHHHHHHHHHHcCCCCeEEECCCCCCCCccccC---CCC-CccccCHHHHHHHHH-HHHh-ccCCHHHH
Confidence 899999999999999999999999999 5999999998877642 333 233 5555677776 4444 48999999
Q ss_pred HHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCee
Q 009410 413 VRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRR 470 (535)
Q Consensus 413 l~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~ 470 (535)
++..+.|||++||+.+++|+ |++.+ ..|.++++++.++..|+||+|.+
T Consensus 284 v~~~s~nPA~i~gl~~~kg~--------i~~~~--~~~~v~~~~~~s~~~~sp~~g~~ 331 (335)
T cd01294 284 EAFASDNGPNFYGLPPNKKT--------ITLVK--EPWKVPEKIPFGNNGVVPFRAGE 331 (335)
T ss_pred HHHHHhHHHHHhCCCCCCCe--------EEEEe--eceEcCchhccCCCceecccCCc
Confidence 99999999999999665555 44554 78999999999999999999864
No 87
>PRK06846 putative deaminase; Validated
Probab=99.97 E-value=4.7e-28 Score=247.49 Aligned_cols=350 Identities=14% Similarity=0.099 Sum_probs=203.8
Q ss_pred cEEEEccEEEcCCC----------ceeeeEEEeCCEEEEeeCCCCC-CCCceEEecCCCEEeecccccccccccccC-CC
Q 009410 54 KILIKGGTVVNAHH----------QQIADVYVEDGIVVAVQPNINV-GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS 121 (535)
Q Consensus 54 ~~vi~n~~vi~~~~----------~~~~~I~I~~G~I~~Vg~~~~~-~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~ 121 (535)
.+.|+|+++..... ...++|+|+||+|++|++.... +.+.++||++|++|+|||||+|+|+..... +.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~~~id~~g~~v~Pg~iD~H~H~~~~~~~~~ 84 (410)
T PRK06846 5 HYWLTNVRLETGFDYENGVIVQTETALCTLEIQDGKIVAIRPNKQVPDATLPTYDANGLLMLPAFREMHIHLDKTYYGGP 84 (410)
T ss_pred ceEEEeeecCccccccCceecCCceeeEEEEEECCEEEEeecCCCCCCCCCceEeCCCCEEecCEEeeeecccchhhccc
Confidence 35677766543222 2467999999999999986332 234789999999999999999999986421 11
Q ss_pred Cc-------------------h---hhh----HHHHHHHHhCCcEEEeccccCCCC----ChHHHHHHHHHHhccccccc
Q 009410 122 ET-------------------I---DDF----FSGQAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAKNSCMDY 171 (535)
Q Consensus 122 ~~-------------------~---~~~----~~~~~~~l~~GvTtv~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 171 (535)
.. + ... ......++.+|+|+++++...... ......+...+.........
T Consensus 85 ~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~a~~~l~~~~~~Gtt~~r~~v~~~~~~~~~~~~a~~e~l~e~~~~v~~~~ 164 (410)
T PRK06846 85 WKACRPAKTIQDRIELEQKELPELLPTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYKDGFTYEI 164 (410)
T ss_pred hhhcCCcccHHHHHhhhhhhHHHhHHHHHHHHHHHHHHHHhCCccEEEEEEeeCcccccchHHHHHHHHHHhhCcceEEE
Confidence 00 0 000 122344567899999887643222 11111122222111111111
Q ss_pred ceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhh-HHHHHHHHHH
Q 009410 172 GFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA-VFEGQKRMIE 250 (535)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~-~~~~~~~~~~ 250 (535)
..+........+..+.+++.. +.|++.++.. .+......+.+.+.++++.|+++|+++++|+..... ....
T Consensus 165 ~a~~~~g~~~~~~~~lL~~al-~~Ga~~i~gl-~p~~~~~~~~~~l~~~~~lA~~~g~~v~~Hv~e~~~~~~~~------ 236 (410)
T PRK06846 165 VAFPQHGLLRSNSEPLMREAM-KMGAHLVGGV-DPASVDGAIEKSLDTMFQIAVDFNKGVDIHLHDTGPLGVAT------ 236 (410)
T ss_pred EeccCcccCCccHHHHHHHHH-HcCCCEEeCC-CCccCCcCHHHHHHHHHHHHHHhCCCcEEEECCCCChhHHH------
Confidence 111110000122334566655 7788877643 333334567899999999999999999999854321 1111
Q ss_pred cCCCCcccccccCChhhHHHHHHHHHHHHHhcC--CCEEEEEccCH---HH---HHHHHHHHHcCCcEEeccccceEeeC
Q 009410 251 LGITGPEGHALSRPPLLEGEATTRAIRLAEFVN--TPLYVVHVMSM---DA---MEEIAKARKAGQRVIGEPVVSGLVLD 322 (535)
Q Consensus 251 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~H~~~~---~~---~~~~~~~~~~g~~v~~~~~~~~~~~~ 322 (535)
+.+.++...+.+ .++++.|+... +. .+.++++++.|+.|+.+..
T Consensus 237 ---------------------~~~~~~~~~~~gl~~~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~~~------- 288 (410)
T PRK06846 237 ---------------------IKYLVETTEEAQWKGKVTISHAFALGDLNEEEVEELAERLAAQGISITSTVP------- 288 (410)
T ss_pred ---------------------HHHHHHHHHHhCCCCCEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEeCC-------
Confidence 112222222222 27889999752 11 1225678999988876422
Q ss_pred cccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHH
Q 009410 323 DSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMV 402 (535)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~ 402 (535)
.+..+ +| +++++++|+++++|||+...... ++... .+...+..... ..
T Consensus 289 ----------~~~g~---~p---------~~~l~~~Gv~v~lGtD~~~~~~~-------p~~~~--d~~~~~~~~~~-~~ 336 (410)
T PRK06846 289 ----------IGRLH---MP---------IPLLHDKGVKVSLGTDSVIDHWS-------PFGTG--DMLEKANLLAE-LY 336 (410)
T ss_pred ----------CCCCC---CC---------HHHHHhCCCeEEEecCCCCCCCc-------CCCCC--CHHHHHHHHHH-Hh
Confidence 11111 22 89999999999999996421111 11000 11112222211 00
Q ss_pred h-cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEEC
Q 009410 403 E-SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAG 481 (535)
Q Consensus 403 ~-~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~ 481 (535)
. ...-+..++|+++|.++ ..++.++.+|+|++||.|||||+|.+++.... +. ...|..||++
T Consensus 337 ~~~~~~~~~~~l~~~T~~a-~~l~~~~~~G~l~~G~~ADlvlld~~~~~~~~------------~~----~~~v~~v~~~ 399 (410)
T PRK06846 337 RWSDERSLSRSLALATGGV-LPLNDEGERVWPKVGDEASFVLVDASCSAEAV------------AR----QSPRTAVFHK 399 (410)
T ss_pred cCCCHHHHHHHHHHHcCCc-cccccCCCccCCCCCCcccEEEEeCCChHHHH------------Hh----cCCceEEEEC
Confidence 0 01123457899999885 56887777899999999999999976532110 00 2479999999
Q ss_pred CEEEEEC
Q 009410 482 GRVVWEN 488 (535)
Q Consensus 482 Gr~V~~~ 488 (535)
|++||..
T Consensus 400 G~~v~~~ 406 (410)
T PRK06846 400 GQLVAGS 406 (410)
T ss_pred CEEEeee
Confidence 9999985
No 88
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.97 E-value=5.4e-28 Score=242.03 Aligned_cols=316 Identities=23% Similarity=0.193 Sum_probs=185.0
Q ss_pred CCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCC--------chh-------------hhHHHHHHHH
Q 009410 77 DGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE--------TID-------------DFFSGQAAAL 135 (535)
Q Consensus 77 ~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~--------~~~-------------~~~~~~~~~l 135 (535)
||+|++|+++...+.++++||++|++|+|||||+|+|++....+.. ... ........+.
T Consensus 1 ~gkI~~i~~~~~~~~~~~vid~~g~~v~Pg~id~h~h~~~~~~~~~~~~~d~~e~~~~~~p~~~~~d~~~~~~~~~~~a~ 80 (359)
T cd01309 1 DGKIVAVGAEITTPADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANEETDPVTPHVRAIDGINPDDEAFKRAR 80 (359)
T ss_pred CCEEEEEcCCCCCCCCCeEEeCCCCEEcCcEEecccccCccccCCCcCcCCccccCCCCCceeEeecccCCCCHhHHHHH
Confidence 7999999998766667899999999999999999999987622110 000 1123456778
Q ss_pred hCCcEEEeccccCCCC-C-------hHH-HHHHHHHHhcc-cccccceeeeeec-------CCh-hhHHHHHHHHHH---
Q 009410 136 AGGTTMHIDFVIPING-S-------LTA-GFEAYEKKAKN-SCMDYGFHMAITK-------WDE-VVSDEMEVMVKE--- 194 (535)
Q Consensus 136 ~~GvTtv~d~~~~~~~-~-------~~~-~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~--- 194 (535)
++|||++.-.++..+- . ... ..+........ ..+.++....... .+. .....+++...+
T Consensus 81 ~~GvT~~~v~p~~~~~~gg~~~~i~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~~~~~~p~trmg~~~~lr~~~~~a~~ 160 (359)
T cd01309 81 AGGVTTVQVLPGSANLIGGQGVVIKTDGGTIEDMFIKAPAGLKMALGENPKRVYGGKGKEPATRMGVAALLRDAFIKAQE 160 (359)
T ss_pred hcCceEEEecCCCCCcccceEEEEECCCCCHHHhcccCCceeEEecCCCCcccccccCCCccchHHHHHHHHHHHHHHHH
Confidence 9999999755322211 0 000 00100000000 1111111000000 000 011111111100
Q ss_pred cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHH
Q 009410 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTR 274 (535)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 274 (535)
......+ +....+.....+..+..++..++.. +++.+|+.... ++.+
T Consensus 161 y~~~~~~-~~~~~~~~~~~d~~l~~l~~~~~~~-~~v~vHa~~~~-------------------------------~i~~ 207 (359)
T cd01309 161 YGRKYDL-GKNAKKDPPERDLKLEALLPVLKGE-IPVRIHAHRAD-------------------------------DILT 207 (359)
T ss_pred HHHHhhh-hhhcccCCCCCCccHHHHHHHHcCC-eeEEEEeCCHH-------------------------------HHHH
Confidence 0000000 0000000111223344555544433 78888887543 3555
Q ss_pred HHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHH
Q 009410 275 AIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQA 354 (535)
Q Consensus 275 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~ 354 (535)
++++.++++.++.+.|+... .+.++++++.|+.++.+|...... ..+. ..........
T Consensus 208 ~l~~~~e~g~~~~i~H~~~~--~~~~~~la~~gv~v~~~P~~~~~~-~~~~-------------------~~~~~~~~~~ 265 (359)
T cd01309 208 AIRIAKEFGIKITIEHGAEG--YKLADELAKHGIPVIYGPTLTLPK-KVEE-------------------VNDAIDTNAY 265 (359)
T ss_pred HHHHHHHcCCCEEEECchhH--HHHHHHHHHcCCCEEECccccccc-cHHH-------------------hhcchhhHHH
Confidence 66677778888889999876 378899999999999887642100 0000 0011244778
Q ss_pred HHhcC-CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccc
Q 009410 355 ALATG-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAI 433 (535)
Q Consensus 355 ~l~~G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI 433 (535)
++++| ++++++||+...... .+......+. ..+++.+++|+++|.|||+++|+++++|+|
T Consensus 266 l~~aGGv~valgsD~~~~~~~------------------~l~~~~~~a~-~~gl~~~~al~~~T~n~A~~lg~~~~~G~l 326 (359)
T cd01309 266 LLKKGGVAFAISSDHPVLNIR------------------NLNLEAAKAV-KYGLSYEEALKAITINPAKILGIEDRVGSL 326 (359)
T ss_pred HHHcCCceEEEECCCCCccch------------------hHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHhCCCCCcccC
Confidence 89997 999999997432111 1111121222 346999999999999999999998889999
Q ss_pred cCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEE
Q 009410 434 LVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVW 486 (535)
Q Consensus 434 ~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~ 486 (535)
++||.|||||+|++++.. ..+|..||++|++||
T Consensus 327 ~~G~~ADlvv~d~dpl~~--------------------~~~v~~v~i~G~~v~ 359 (359)
T cd01309 327 EPGKDADLVVWNGDPLEP--------------------TSKPEQVYIDGRLVY 359 (359)
T ss_pred CCCCccCEEEECCCcccc--------------------cCcccEEEECCEEeC
Confidence 999999999999874421 248999999999986
No 89
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=99.96 E-value=3.5e-28 Score=242.31 Aligned_cols=354 Identities=20% Similarity=0.227 Sum_probs=202.1
Q ss_pred CcccEEEEccEEEcCCCc-eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-CCCchhhhH
Q 009410 51 SSSKILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GSETIDDFF 128 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~~-~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~~~~~~~~ 128 (535)
|.++++|+|++|++++.. .+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|...... ...+.+.+.
T Consensus 1 ~~~~~~i~n~~i~~~~~~~~~~~i~V~dGkI~~I~~~~~~~~~~~viD~~G~~i~PGfID~HvHg~~g~~~~~~~~e~~~ 80 (380)
T TIGR00221 1 MAESYLLKDIAIVTGNEVIDNGAVGINDGKISTVSTEAELEPEIKEIDLPGNVLTPGFIDIHIHGCGGVDTNDASFETLE 80 (380)
T ss_pred CCceEEEEeeEEECCCCEEeccEEEEECCEEEEEcccccCCCCCeEEECCCCEEccceeeeeeccccCcCCCCCCHHHHH
Confidence 346799999999998765 468999999999999876443445689999999999999999999865311 123457788
Q ss_pred HHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHh--cccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEee
Q 009410 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA--KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (535)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (535)
...+.+++.|||+++++....+. ...+.++.+.+.. ......+++|...+..+.+ ..|+..-..
T Consensus 81 ~~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~~~a~~lG~HlEGPfi~~~----------~~Gah~~~~--- 147 (380)
T TIGR00221 81 IMSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKEKNAQALGLHLEGPFLSPE----------KKGAHPPEY--- 147 (380)
T ss_pred HHHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhccCCceeeeEeeecCcCChh----------hcCCCCHHH---
Confidence 88999999999999988654443 4555566555432 1234567777766654431 112211000
Q ss_pred cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCC
Q 009410 206 YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285 (535)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (535)
...++.+.++++++.+. ..+++..=+++.....+.++.+.+.|+....+|.... ++++.++++. |.+
T Consensus 148 ---i~~p~~~~~~~~~~~~~-~~i~~vTlAPE~~~~~~~i~~l~~~gi~vs~GHs~A~-----~~~~~~a~~~----Ga~ 214 (380)
T TIGR00221 148 ---IREPDVELFKKFLCEAG-GVITKVTLAPEEDQHFELIRHLKDAGIIVSAGHTNAT-----YELAKAAFKA----GAT 214 (380)
T ss_pred ---hhCcCHHHHHHHHHhcC-CCEEEEEECCCCCChHHHHHHHHHCCeEEEeeCCCCC-----HHHHHHHHHc----CCC
Confidence 01234455555554332 2233333333322233444444444444433443221 1222233222 222
Q ss_pred EEEEEccCHHH------HHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhc-
Q 009410 286 LYVVHVMSMDA------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT- 358 (535)
Q Consensus 286 ~~~~H~~~~~~------~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~- 358 (535)
+++|+.+.-. .-.+..+-.. -.++++...+..++.+ ..++-+.+.
T Consensus 215 -~~THlfNaM~~~~hR~pg~vga~l~~-~~~~~elI~Dg~Hv~p--------------------------~~~~~~~r~k 266 (380)
T TIGR00221 215 -HATHLYNAMSPIHHREPGVIGAVLDH-DDVYTEIIADGIHIHP--------------------------LNIRLAKKLK 266 (380)
T ss_pred -eeeeeccCCCCcCCCCCcHHHHHhcC-CCcEEEEEcCCCcCCH--------------------------HHHHHHHHhc
Confidence 2344433110 0000100000 0123333333222222 223322222
Q ss_pred C-CeEEEeCCCCCCCh---hhhhcCC-------CCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHc
Q 009410 359 G-ILQLVGTDHCAFNS---TQKAFGI-------DDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIF 424 (535)
Q Consensus 359 G-v~~~lgtD~~~~~~---~~~~~~~-------~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~l 424 (535)
| -++.+-||.....- ....++. +....... |....+...++.+++..+++++++++++|.|||+++
T Consensus 267 g~~~~~lvtDa~~~~g~~~G~y~l~~~~v~~~~g~~~~~~g~LAGs~ltl~~~v~~l~~~~~~~~~eal~~aT~npA~~l 346 (380)
T TIGR00221 267 GDSKLCLVTDSMAAAGAKDGVFIFGGKTVYIREGTCLDSNGTLAGSSLTMIEGARNLVEFTNISLTDAARMSSLNPARAL 346 (380)
T ss_pred CCCcEEEEeccccccCCCCceEeECCEEEEEECCEEEcCCCceechhhhHHHHHHHHHHhhCCCHHHHHHHHhHHHHHHh
Confidence 3 24666666432111 0000000 00000001 556677777888888888999999999999999999
Q ss_pred CCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCE
Q 009410 425 NVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGR 483 (535)
Q Consensus 425 gl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr 483 (535)
|+++++|+|++|+.|||+|+|.+ .+|+.||++|+
T Consensus 347 gl~~~~G~i~~G~~ADlvv~d~~-------------------------~~v~~t~~~G~ 380 (380)
T TIGR00221 347 GIDDRLGSVTVGKDANLVVFTPD-------------------------FEVILTIVNGN 380 (380)
T ss_pred CCCCCCcccCCCCcCCEEEECCC-------------------------CCEEEEEeCCC
Confidence 99766899999999999999964 37899999985
No 90
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.96 E-value=8.7e-29 Score=235.20 Aligned_cols=360 Identities=19% Similarity=0.199 Sum_probs=221.4
Q ss_pred eeeeEEEeC-CEEEEeeCCCCCC----------CCceEEecCCCEEeeccccccccccccc----CC-------------
Q 009410 69 QIADVYVED-GIVVAVQPNINVG----------DDVKVLDATGKFVMPGGIDPHTHLAMEF----MG------------- 120 (535)
Q Consensus 69 ~~~~I~I~~-G~I~~Vg~~~~~~----------~~~~vID~~G~~vlPGlID~H~H~~~~~----~g------------- 120 (535)
++..+.|.| |+|+.|++....+ +..++++.+|.++||||||+|+|....+ .|
T Consensus 26 e~~sl~Vd~~GKi~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~mPGfVdtH~H~a~q~~~s~~g~d~pll~wl~~~~ 105 (439)
T KOG3968|consen 26 EGSSLGVDDTGKIVFIGKAYFDENKLKGEGVEKENTKIKLSSGHFLMPGFVDTHIHPAHQFAMSGAGTDMPLLQWLGKYT 105 (439)
T ss_pred cCcceeecCCccEEEeeccccchhhhcccccccccceeeecCCcEEecceeecccchHhhhhhhccccCcHHHHHhhcce
Confidence 466778887 9999999854322 2457899999999999999999942221 01
Q ss_pred -----CCch-hhh----HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccc-----cceeeee--ecCChh
Q 009410 121 -----SETI-DDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMD-----YGFHMAI--TKWDEV 183 (535)
Q Consensus 121 -----~~~~-~~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~ 183 (535)
.... ++. ....+..+++|+||+....+.........++...+.+.+..+. .+.+... ....++
T Consensus 106 f~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~~~~~~s~~ll~~~~~~~G~R~~igkv~m~~~~~~~p~~~~~~E~ 185 (439)
T KOG3968|consen 106 FPLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFSTLHLDSELLLARAAIRAGQRALIGKVCMDCNAHAVPKGVETTEE 185 (439)
T ss_pred eecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhhccCchhHHHHHHHHHHhCCceeeeeehhccCCCCCCccchhHHH
Confidence 1111 221 2234567899999998665433334455555666666664332 1111100 111122
Q ss_pred hHHHHHHHH---HHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEc-CChhhHHHHHHHHHHcCCCCcccc
Q 009410 184 VSDEMEVMV---KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 184 ~~~~~~~~~---~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
..+...++. ++.+-......+.+.....++.+.+....+.|+...+++..|. ++..++....+.+-.
T Consensus 186 si~~t~~~i~~~~~~~~~~~~~~vt~~fa~~c~k~v~~~l~~lak~~~l~~q~hIsen~~EI~~~~~ff~~--------- 256 (439)
T KOG3968|consen 186 SIESTEDLIPKLEKLKREKVNPIVTPRFAASCSKGVFEELSKLAKYHNLHIQIHISENGKEIEAVKNFFPE--------- 256 (439)
T ss_pred HHHHHHHHHHHHHhhccCCCCCcccccccCCCcchhHHHHHHHHHhhhhhhhhhhhhcHHHHHHHHHhhhh---------
Confidence 222222222 1222222222122333456788888888888988999999998 555555544433211
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (535)
......+.+.....+.+..+.|+...++ +.++.++++|..++.||+... .++++.
T Consensus 257 ---------~~~y~~~yd~~~lL~~ktvlaH~~hl~d-~ei~~l~k~g~svshCP~Sn~-------------~L~sG~-- 311 (439)
T KOG3968|consen 257 ---------KLSYTDVYDKGGLLTEKTVLAHLEHLSD-EEIELLAKRGCSVSHCPTSNS-------------ILGSGI-- 311 (439)
T ss_pred ---------cccchHHHHHhcccchHhHhhhheecCc-hhHHHHHhcCCceEECCcchh-------------hhccCC--
Confidence 1112223333445555556777776666 889999999999999999732 233332
Q ss_pred cCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHH
Q 009410 340 SPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTE 419 (535)
Q Consensus 340 ~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~ 419 (535)
.+++++++.|+.+.+|||.++++....+. ..+.+...+.......+||++|+|.+||+|
T Consensus 312 ----------~~vr~lL~~~v~VgLGtDv~~~s~l~a~r-----------~A~~~s~hL~~~~~~~~Ls~~e~L~lATi~ 370 (439)
T KOG3968|consen 312 ----------PRVRELLDIGVIVGLGTDVSGCSILNALR-----------QAMPMSMHLACVLDVMKLSMEEALYLATIG 370 (439)
T ss_pred ----------ccHHHHHhcCceEeecCCccccccHHHHH-----------HHHHHHHHHHhccCcccCCHHHHHHHHhcc
Confidence 23899999999999999987644332110 011122222111134679999999999999
Q ss_pred HHHHcCCCCCCccccCCCCccEEEEcCCCce----eeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEE
Q 009410 420 CARIFNVYPRKGAILVGSDADIIIFNPNSSF----EITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 487 (535)
Q Consensus 420 ~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~----~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~ 487 (535)
+|+++|+++..|++++||.+|++++|.+.+. ..+ ...+......|.|- .+++..|||+|+.|+.
T Consensus 371 GA~aLg~d~~~Gs~eVGK~fDai~id~s~~~~~l~~~~--~~~~lI~~~v~~g~--drni~~V~V~Gk~v~~ 438 (439)
T KOG3968|consen 371 GAKALGRDDTHGSLEVGKYFDAIIIDLSAPESPLYRFS--GHHDLISKVVYNGD--DRNIAEVFVAGKLVKQ 438 (439)
T ss_pred chhhccCCCcccceecccccceEEEeCCCCcchhhhcc--chHHHHHHHHhcCC--CCceEEEEEccEEecc
Confidence 9999999999999999999999999987651 111 01111112234332 3489999999999975
No 91
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=3e-28 Score=233.32 Aligned_cols=351 Identities=23% Similarity=0.298 Sum_probs=217.6
Q ss_pred EEEEccEEEcCCCc-eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeeccccccccccccc--CCCCchhhhHHHH
Q 009410 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF--MGSETIDDFFSGQ 131 (535)
Q Consensus 55 ~vi~n~~vi~~~~~-~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~--~g~~~~~~~~~~~ 131 (535)
.+|+|++|+++..+ .++.++|+||+|.+|.+ .+.|.+.++||.+|.+|.|||||.|+|-+... +...+.+.+....
T Consensus 2 ~~~~~~~i~t~~~~~~~~~v~i~dg~I~~i~~-~~~p~~~e~id~~G~~l~PGfID~hihG~gG~~~~D~~~~~~l~~i~ 80 (380)
T COG1820 2 YALKNGRIFTGHGVLDGGAVVIEDGKIEAVVP-AELPADAEIIDLKGALLVPGFIDLHIHGGGGADFMDAGSVETLETMA 80 (380)
T ss_pred ceeeccEEEcCcceEECcEEEEcCCEEEEEec-CcCCCcceeecCCCCEecccEEEEeecCcCcccccCccCHHHHHHHH
Confidence 57899999999987 56699999999999998 34567899999999999999999999988762 2233556677778
Q ss_pred HHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCC
Q 009410 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (535)
+..+++|+|++.-.....+. ...+.++...+... ....-.+.|...+..+.+ ++|+..-+. .
T Consensus 81 ~~~~~~GtTsfLpT~iT~~~e~i~~al~~~~e~~~~~ga~ilGiHLEGP~ls~~----------kkGAh~~~~------i 144 (380)
T COG1820 81 EAHLRHGTTSFLPTLITASLEKIKAALRAIREAIAKGGAQILGIHLEGPFLSPE----------KKGAHNPEY------I 144 (380)
T ss_pred HHhhhcCeeeeeeecccCCHHHHHHHHHHHHHHHhccCCceEEEEeecCccCHh----------hccCCCHHH------h
Confidence 88899999999844322221 34444444433332 222334555544444321 333332211 1
Q ss_pred CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEE
Q 009410 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (535)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (535)
...+++.+.++++.++. .+....=+++.....+.+..+.+.|+....+|.... ++...++++. |.. +.+
T Consensus 145 r~~~~~~~~~~~~~a~g-~i~~vTlAPE~~~~~e~i~~l~~~giivs~GHS~At-----ye~~~~a~~~----Ga~-~~T 213 (380)
T COG1820 145 RPPDPEELEQLIAAADG-LIKLVTLAPELDGTKELIRLLANAGIVVSIGHSNAT-----YEQARAAFEA----GAT-FVT 213 (380)
T ss_pred CCCCHHHHHHHHhhccC-ceEEEEECCCCCCCHHHHHHHHhCCeEEEecCcccc-----HHHHHHHHHh----Ccc-EEE
Confidence 23467778877777765 344444444443345566666666766555555322 2333343333 222 456
Q ss_pred EccCHHHHHHHHHHHHcCC--------cEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhc--C
Q 009410 290 HVMSMDAMEEIAKARKAGQ--------RVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT--G 359 (535)
Q Consensus 290 H~~~~~~~~~~~~~~~~g~--------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~--G 359 (535)
|+.+.-. -+. -++.|+ .++++...+.+++++ ..++-+++. +
T Consensus 214 HlfNaMs--~l~-hREPGvvGA~L~~~~~~~eiIaDG~HVhP--------------------------~~~~ia~~~kg~ 264 (380)
T COG1820 214 HLFNAMS--GLH-HREPGVVGAALDNPDVYAEIIADGVHVHP--------------------------AAIRLALKAKGG 264 (380)
T ss_pred eeccCCC--CCC-CCCCcccceeecCCCeEEEEEccCcccCH--------------------------HHHHHHHhccCC
Confidence 6654321 111 111221 133333333333322 333333332 3
Q ss_pred CeEEEeCCCCCCChhh---hhcCC------CCcccCcc----hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 360 ILQLVGTDHCAFNSTQ---KAFGI------DDFRKIPN----GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 360 v~~~lgtD~~~~~~~~---~~~~~------~~~~~~~~----g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
-++.+-||.....-.. ..++. +.....+. |....|...++.+++..+.+++||++|+|.+||+.+|+
T Consensus 265 ~~i~LVTDam~a~G~~dg~y~lgg~~V~v~~g~~~~~~GtLAGS~Ltm~~avrn~v~~~~~~~~eAv~maS~~PA~~lgl 344 (380)
T COG1820 265 DKIVLVTDAMAAAGLPDGEYILGGQTVTVADGARRLEDGTLAGSTLTMDEAVRNLVEWGGISLAEAVRMASLNPAKALGL 344 (380)
T ss_pred ceEEEEEccccccCCCCccEEECCEEEEEECCEEECCCCceeeeeeeHHHHHHHHHHHhCCCHHHHHHHhhhhHHHHhCC
Confidence 5688888854322110 00000 01111111 44556777888899999999999999999999999999
Q ss_pred CCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEE
Q 009410 427 YPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 487 (535)
Q Consensus 427 ~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~ 487 (535)
++++|+|++||.||||+||.| -+|..||++|+++++
T Consensus 345 ~~~~G~i~~G~~Adlvvld~d-------------------------~~v~~T~i~G~~~~~ 380 (380)
T COG1820 345 DDRLGSIKPGKDADLVVLDDD-------------------------LNVKATWINGEKVFN 380 (380)
T ss_pred cCcccccCCCcccCEEEECCC-------------------------CcEEEEEECCEEeeC
Confidence 999999999999999999954 389999999999874
No 92
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.96 E-value=1.3e-27 Score=240.52 Aligned_cols=349 Identities=19% Similarity=0.234 Sum_probs=205.9
Q ss_pred EEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-CCCchhhhHHHHHH
Q 009410 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GSETIDDFFSGQAA 133 (535)
Q Consensus 55 ~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~~~~~~~~~~~~~ 133 (535)
++|+|++|+++....+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|...... .....+.+....+.
T Consensus 1 ~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~vid~~g~~l~PG~iD~H~H~~~g~~~~~~~~e~~~~~~~~ 80 (374)
T cd00854 1 LIIKNARILTPGGLEDGAVLVEDGKIVAIGPEDELEEADEIIDLKGQYLVPGFIDIHIHGGGGADFMDGTAEALKTIAEA 80 (374)
T ss_pred CEEEeEEEeCCCEEcccEEEEECCEEEEecCCCCcccCCcEEECCCCEecccEEEeeecccCCCCCCCCCHHHHHHHHHH
Confidence 37899999998445688999999999999886544445689999999999999999999865311 12235777888899
Q ss_pred HHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcc--cccccceeeeeecCC-------------hhhHHHHHHHHHHcCC
Q 009410 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN--SCMDYGFHMAITKWD-------------EVVSDEMEVMVKEKGI 197 (535)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~g~ 197 (535)
++++|||+++++...... ...+.+..+.+.... ....++++...+..+ ....++++++. ..+.
T Consensus 81 ~~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~g~~~~g~hleGP~~~~~~~g~h~~~~~~~~~~~~~~~~~-~~~~ 159 (374)
T cd00854 81 LAKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQGAEILGIHLEGPFISPEKKGAHPPEYLRAPDPEELKKWL-EAAG 159 (374)
T ss_pred HHccCcceeeccccCCCHHHHHHHHHHHHHHhhcCCCCeeEEEeeecCccCcccCCCCCHHHcCCcCHHHHHHHH-HhcC
Confidence 999999999998644332 344444444443221 122232232221111 11235667777 4566
Q ss_pred CEEEEEeecCCCCcCCHHHH--HHHHHHHHhcCCeEE-EEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHH--HHH
Q 009410 198 NSFKFFMAYKGSFMINDELL--IEGFKRCKSLGALAM-VHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEG--EAT 272 (535)
Q Consensus 198 ~~ik~~~~~~~~~~~~~~~l--~~~~~~a~~~g~~v~-~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~ 272 (535)
+.+|++ .+.+|.. .+++++++++|+++. .|.... ....+...+.|+....+..+..+..... ..+
T Consensus 160 ~~ik~~-------tlaPE~~~~~~~i~~~~~~gi~v~~GH~~a~---~~~~~~a~~~G~~~~tH~~n~m~~~~~r~~~~~ 229 (374)
T cd00854 160 GLIKLV-------TLAPELDGALELIRYLVERGIIVSIGHSDAT---YEQAVAAFEAGATHVTHLFNAMSPLHHREPGVV 229 (374)
T ss_pred CCEEEE-------EECCCCCChHHHHHHHHHCCeEEEeeCCcCC---HHHHHHHHHcCCCeeeECCCCCCCcCCCCCcHH
Confidence 889986 2355656 889999999999995 998643 1223344456776655443322221110 001
Q ss_pred HHHHHHHHhcCCCE-EEEEccCHHHHHHHHHHHHc-C-CcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccH
Q 009410 273 TRAIRLAEFVNTPL-YVVHVMSMDAMEEIAKARKA-G-QRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHN 349 (535)
Q Consensus 273 ~~~~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~-g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ 349 (535)
..+++.. .... .+.|....+. +.++.+.+. | -.+..++-......-++ ..|..... .
T Consensus 230 ~a~l~~~---~~~~~li~dg~Hv~~-~~~~~~~r~~g~~~~~lvtD~~~~~G~~~----------g~y~~~~~-~----- 289 (374)
T cd00854 230 GAALSDD---DVYAELIADGIHVHP-AAVRLAYRAKGADKIVLVTDAMAAAGLPD----------GEYELGGQ-T----- 289 (374)
T ss_pred HHhhcCC---CCeEEEEcCCCcCCH-HHHHHHHHhcCCCcEEEEeccccccCCCC----------CeEEECCE-E-----
Confidence 1111110 1112 2344433333 445555444 3 33333322111000000 11110000 0
Q ss_pred HHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCC
Q 009410 350 KALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPR 429 (535)
Q Consensus 350 ~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~ 429 (535)
+ ...+..+.+.++... |-...+...++.+++.++++++++++++|.|||+++|++++
T Consensus 290 --~---~~~~~~~~~~~g~la------------------G~~~~l~~~~~~l~~~~~l~~~~al~~aT~npA~~lg~~~~ 346 (374)
T cd00854 290 --V---TVKDGVARLADGTLA------------------GSTLTMDQAVRNMVKWGGCPLEEAVRMASLNPAKLLGLDDR 346 (374)
T ss_pred --E---EEECCEEEcCCCCee------------------ehHhhHHHHHHHHHHhhCCCHHHHHHHHhHHHHHHcCCCCC
Confidence 0 001112223322111 11234555565667777899999999999999999999777
Q ss_pred CccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECC
Q 009410 430 KGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGG 482 (535)
Q Consensus 430 ~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~G 482 (535)
.|+|++|+.|||+++|.+ .+|+.||++|
T Consensus 347 ~G~i~~G~~ADlvv~d~~-------------------------~~v~~~~~~G 374 (374)
T cd00854 347 KGSLKPGKDADLVVLDDD-------------------------LNVKATWING 374 (374)
T ss_pred cCCcCCCCcCCEEEECCC-------------------------CcEEEEEeCc
Confidence 999999999999999965 3788999887
No 93
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.96 E-value=2.5e-26 Score=231.84 Aligned_cols=398 Identities=22% Similarity=0.267 Sum_probs=226.6
Q ss_pred EEccEEEcCCCc---eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeeccccccccccccc--CC-CCchhhhH--
Q 009410 57 IKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF--MG-SETIDDFF-- 128 (535)
Q Consensus 57 i~n~~vi~~~~~---~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~--~g-~~~~~~~~-- 128 (535)
|+|++|+++... .+++|+|+||+|++|++.. .+.++||++|++|+|||||+|+|+.... .+ ...+++..
T Consensus 1 Ikng~V~d~~~~~~~~~~dI~IedGkIv~Vg~~~---~~~~vID~~G~~VmPGfID~HtH~~gg~~~~~r~~~pe~~~~~ 77 (541)
T cd01304 1 IKNGTVYDPLNGINGEKMDIFIRDGKIVESSSGA---KPAKVIDASGKVVMAGGVDMHSHIAGGKVNVGRILRPEDHRRD 77 (541)
T ss_pred CEEEEEEcCCCcccccccEEEEECCEEEEEccCC---CCCeEEECCCCEEECCeeeeeeCccccccccccccChhhhhcc
Confidence 578999997643 5789999999999998743 2468999999999999999999997651 11 11222211
Q ss_pred --------------------HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee----------e
Q 009410 129 --------------------SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI----------T 178 (535)
Q Consensus 129 --------------------~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 178 (535)
...-.+.+-|+||++++..++.. .+..-+++.. ...++-+.+.-. .
T Consensus 78 ~~~~~~~~~~~~g~~~pst~~tgy~ya~mGytt~~e~a~~p~~-a~h~h~e~~~---~p~~d~~~~~~~gnn~~~~~~~~ 153 (541)
T cd01304 78 PVPKGALRRAGVGFSVPSTLATGYRYAEMGYTTAFEAAMPPLN-ARHTHEEMAD---TPILDKGAYPLLGNNWFVLEYLR 153 (541)
T ss_pred ccccccccccCCCccCCCchHhhhHHHhcCcceeecccCCccc-chhhhHHhcc---CccccccceEEecchHHHHHHHh
Confidence 01134567899999998766543 2222222221 122222211111 1
Q ss_pred cCC-hhhHHHHHHHHHHcCCCEEEEEeecCC------------------CCcCC-HHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 179 KWD-EVVSDEMEVMVKEKGINSFKFFMAYKG------------------SFMIN-DELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 179 ~~~-~~~~~~~~~~~~~~g~~~ik~~~~~~~------------------~~~~~-~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
..+ +.....+..+++..+.-++|+. ++.| ...++ .+.++.+.+.+.++|++..+|....
T Consensus 154 ~~~~~~~~~~vaw~l~~tk~~giK~v-npgG~~a~~~~~~~~~~d~~~~~~~vtp~~ii~~l~~~~~~lg~ph~iH~h~n 232 (541)
T cd01304 154 DGDMEKLAAYVAWTLKASKGYGIKVV-NPGGTEAWGWGQNVLSLDDPVPYFDITPREILKGLAEANEELGLPHSIHVHCN 232 (541)
T ss_pred cCCHHHHHHHHHHHHHhccceEEEEE-CCCchhhhccCCccccccCCCCCCCCCHHHHHHHHHHHHHhcCCceEEEEccc
Confidence 111 1233444445545566777774 2221 12334 5667888888888998866665321
Q ss_pred hhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCC-----CEEEEEcc---C--------HHHHHHHHH
Q 009410 239 DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT-----PLYVVHVM---S--------MDAMEEIAK 302 (535)
Q Consensus 239 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~H~~---~--------~~~~~~~~~ 302 (535)
+ .|..+ ..+...+.+++++.... .+|++|+. + ....+.+..
T Consensus 233 n-----------lg~pg------------n~~~t~~t~~~~~~~~~~~~~~~~h~tH~qfhsyg~~~~~~~~s~a~~i~~ 289 (541)
T cd01304 233 N-----------LGVPG------------NYETTLETMKAAEGVKPDPRRQVLHLTHVQFHSYGGTSWRDFESGAERIAD 289 (541)
T ss_pred c-----------CCCCC------------cHHHHHHHHHHhhcCCCccccceeEeeeeeEEeeccCCcccHhHHHHHHHH
Confidence 1 01111 12233444555444443 37777774 1 123355666
Q ss_pred HHHcCCcEEeccccceE----eeCc--------cc-------ccCcCccccce---eEEcCCCCCcccHHH----HHHHH
Q 009410 303 ARKAGQRVIGEPVVSGL----VLDD--------SW-------LWHSDFVTAAK---YVMSPPIRASGHNKA----LQAAL 356 (535)
Q Consensus 303 ~~~~g~~v~~~~~~~~~----~~~~--------~~-------~~~~~~~~~~~---~~~~p~~r~~~~~~~----~~~~l 356 (535)
+...+-.|+.+.....+ -+.. .. ..+.+...|++ +...+......-+-+ +..++
T Consensus 290 ~~n~~~~it~D~G~v~f~~t~tmt~d~~~~~~~~~~~~~kw~~~d~e~e~g~Gvvp~~y~~k~~v~~lqwaiglEl~ll~ 369 (541)
T cd01304 290 YVNANDHVTIDVGQVIFGETTTMTGDGPMQFDLHGLTGLKWVNCDIELETGSGVVPFIYSPKNPVNALQWAIGLELFLLI 369 (541)
T ss_pred HHHcCCCEEEEeCceecCCcEEEEccchhhcccccccCCceeeeeeEeccCCceEEeEecCCCCchHHHHHHHHHHHHHh
Confidence 66667666665543311 0110 00 00011111211 111111111111112 22455
Q ss_pred hcCCeEEEeCCCCCCChhhhhcCCCCcccCcchH------HHHHHHH--HHHHH--------hcCCCCHHHHHHHHhHHH
Q 009410 357 ATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGI------EERMHLV--WDTMV--------ESGQISVTDYVRLTSTEC 420 (535)
Q Consensus 357 ~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~------~~~l~~~--~~~~~--------~~~~ls~~eal~~~T~~~ 420 (535)
+.-.++.++|||+.. .||...|.-+ ..+...+ +.+.+ -...+|++++++++|.||
T Consensus 370 ~dp~~~~~tTDhPn~---------gpf~~YP~~i~~lm~~~~r~~~~~~~~~~~~~~~~l~~~~reLSLeei~~mtT~nP 440 (541)
T cd01304 370 DDPWKVILTTDHPNG---------GPFTRYPRIIAWLMSKKFRAEEIATLHKWAQDRSALPGIDREYSLYEIAIMTRAGP 440 (541)
T ss_pred CCcceEEeecCCCCC---------CCcccHHHHHHHHhCHHHHHHHHHhcCHHHHhhccccCCCCCCCHHHHHHHHHHHH
Confidence 666799999997542 3555544400 1111111 00000 023479999999999999
Q ss_pred HHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceE
Q 009410 421 ARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKY 500 (535)
Q Consensus 421 A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~ 500 (535)
|++||++ +.|+|++|+.|||+|+|.++. .+.++++.+. ....++|.+||++|++|+++|+++..+ .|+.
T Consensus 441 AKiLGL~-~kG~L~~G~~ADLvIfD~n~~-~v~~~dl~s~--------~~~~gkV~~Tiv~GkvVv~dGeiv~~~-~G~~ 509 (541)
T cd01304 441 AKLLGLS-DKGHLGVGADADIAIYDDDPD-QVDPSDYEKV--------EKAFSRAAYVLKDGEIVVKDGEVVAEP-WGRT 509 (541)
T ss_pred HHHhCCC-CCCccCCCCcCCEEEEeCCcC-ccCchhhcCc--------eeecCcEEEEEECCEEEEECCEEccCC-CCcE
Confidence 9999995 579999999999999998876 5554433322 234568999999999999999998754 6777
Q ss_pred eecCC
Q 009410 501 IEMRP 505 (535)
Q Consensus 501 ~~~~~ 505 (535)
+.-.+
T Consensus 510 l~~~~ 514 (541)
T cd01304 510 YWVDV 514 (541)
T ss_pred EEEec
Confidence 76543
No 94
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=99.96 E-value=2.7e-27 Score=236.70 Aligned_cols=352 Identities=19% Similarity=0.183 Sum_probs=195.6
Q ss_pred EEEEccEEEcCCCc-eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCC-----CCchhhhH
Q 009410 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-----SETIDDFF 128 (535)
Q Consensus 55 ~vi~n~~vi~~~~~-~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g-----~~~~~~~~ 128 (535)
++|+|++|+++... .+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|......- ..+.+.+.
T Consensus 2 ~~i~n~~i~~~~~~~~~~~v~IedgkI~~I~~~~~~~~~~~~ID~~G~~l~PG~ID~HvHG~~g~~~~~~~~~~~~~~l~ 81 (382)
T PRK11170 2 YALTNGRIYTGHEVLDDHAVVIADGLIEAVCPVAELPPGIEQRDLNGAILSPGFIDLQLNGCGGVQFNDTAEAISVETLE 81 (382)
T ss_pred EEEEeeEEECCCCeEeCCEEEEECCEEEEecCCccCCCCCeEEeCCCCEEccceeeeeecCccCcccccCccCCCHHHHH
Confidence 67999999998865 4679999999999998754433456899999999999999999997544211 12456677
Q ss_pred HHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHh-cccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeec
Q 009410 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (535)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (535)
...+.++++|||+++++...... ...+.++...+.. ......+++|...+..+.+ ..|+..-..
T Consensus 82 ~~~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~~a~~~G~HlEGPfi~~~----------~~Gah~~~~---- 147 (382)
T PRK11170 82 IMQKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKHPNQALGLHLEGPYLNLV----------KKGTHNPEF---- 147 (382)
T ss_pred HHHHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcCCCeEEEEEeecCCCCcc----------cCCCCCHHH----
Confidence 77777899999999987654433 4455555554432 2234567777665554421 111111000
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCE
Q 009410 207 KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (535)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (535)
...++.+.++.+.+.+ ..+++..=+++... .+.++.+.+.|+....+|.... +++..++++. |..
T Consensus 148 --~~~p~~~~~~~~~~~~--~~i~~iTlAPE~~~-~~~i~~l~~~gi~vs~GHs~A~-----~~~~~~a~~~----Ga~- 212 (382)
T PRK11170 148 --IRKPDAEMVDFLCENA--DVITKVTLAPEMVD-AEVIRKLVEAGIVVSAGHSNAT-----YEEAKAGFRA----GIT- 212 (382)
T ss_pred --hcCcCHHHHHHHHhcc--CCEEEEEECCCCCc-HHHHHHHHHCCcEEEeeCCcCC-----HHHHHHHHHc----CCC-
Confidence 0112333444444332 12233332322221 1333344444433333333211 1222222222 222
Q ss_pred EEEEccCHHH------HHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhc-C
Q 009410 287 YVVHVMSMDA------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT-G 359 (535)
Q Consensus 287 ~~~H~~~~~~------~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~-G 359 (535)
+++|+.+.-. .-.+..+-.. -.+.++...+..++.+. .++-+.+. |
T Consensus 213 ~~THlfNaM~~~~hR~pg~vga~l~~-~~~~~elI~Dg~Hv~p~--------------------------~~~~~~~~k~ 265 (382)
T PRK11170 213 FATHLYNAMPYITGREPGLVGAILDE-PDVYCGIIADGLHVDYA--------------------------NIRNAKRLKG 265 (382)
T ss_pred EEeeccccCCcccCCCcchhhHhhcC-CCcEEEEEcCcccCCHH--------------------------HHHHHHHhcC
Confidence 2444433110 0000000000 01233333333333222 22222221 3
Q ss_pred CeEEEeCCCCCCChh---hhhcCC-------CC-cccCcc--hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 360 ILQLVGTDHCAFNST---QKAFGI-------DD-FRKIPN--GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 360 v~~~lgtD~~~~~~~---~~~~~~-------~~-~~~~~~--g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
-++.+-||....... ...++. +. +..-.. |-...+...++.++...++++++|++++|.|||+.+|+
T Consensus 266 ~~~~lvtDa~~~~G~~~g~y~l~~~~v~v~~g~~~~~~G~LAGs~l~l~~~v~~l~~~~~~~~~eal~~aT~npA~~lgl 345 (382)
T PRK11170 266 DKLCLVTDATAPAGANIEQFIFAGKTIYYRDGLCVDENGTLSGSALTMIEAVRNLVEHVGIALDEALRMATLYPARAIGV 345 (382)
T ss_pred CcEEEEeccccCCCCCCCeEEECCEEEEEECCEEECCCCcccccHhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCC
Confidence 456666664321110 000000 00 000001 44556777787888888899999999999999999999
Q ss_pred CCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEE
Q 009410 427 YPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 487 (535)
Q Consensus 427 ~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~ 487 (535)
++++|+|++|+.|||+|+|.+ .+++.||++|++++.
T Consensus 346 ~~~~G~i~~G~~ADlvvld~~-------------------------~~v~~v~~~G~~~~~ 381 (382)
T PRK11170 346 DKRLGSIEAGKVANLTAFTRD-------------------------FKITKTIVNGNEVVT 381 (382)
T ss_pred CCCccccCCCCcCCEEEECCC-------------------------CcEEEEEECCEEeec
Confidence 766899999999999999954 378999999999874
No 95
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=99.95 E-value=1.1e-26 Score=242.91 Aligned_cols=186 Identities=16% Similarity=0.126 Sum_probs=121.9
Q ss_pred CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEE
Q 009410 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (535)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (535)
..++++.+.++++.|++.|+++.+|+.++..+...++.+.. +.......+.+..+.
T Consensus 290 ~~~~~e~l~~~~~~a~~~g~~v~~Ha~gd~~i~~~l~~~~~------------------------~~~~~g~~~~r~~i~ 345 (479)
T cd01300 290 LLISPEELEELVRAADEAGLQVAIHAIGDRAVDTVLDALEA------------------------ALKDNPRADHRHRIE 345 (479)
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHHHHHHH------------------------HHHhcCCCCCCceee
Confidence 35689999999999999999999999887665555543321 111111124567899
Q ss_pred EccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCC
Q 009410 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (535)
Q Consensus 290 H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~ 369 (535)
|+...+. ++++++++.|+.++.+|.. .++..+........ ...... ..+++.++++|+++++|||+.
T Consensus 346 H~~~~~~-~~~~~l~~~gv~~~~~P~~--~~~~~~~~~~~~lg-~~~~~~---------~~p~~~~~~~Gv~v~lGSD~~ 412 (479)
T cd01300 346 HAQLVSP-DDIPRFAKLGVIASVQPNH--LYSDGDAAEDRRLG-EERAKR---------SYPFRSLLDAGVPVALGSDAP 412 (479)
T ss_pred ecccCCH-HHHHHHHHcCCceEeCccc--ccCchHHHHHhccc-HHHHhc---------CchHHHHHHCCCeeeccCCCC
Confidence 9998886 8999999999888776653 22222111100000 000111 134889999999999999975
Q ss_pred CCChhhhhcCCCCcccCcchHHHHHHHHHHHH----HhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEE
Q 009410 370 AFNSTQKAFGIDDFRKIPNGIEERMHLVWDTM----VESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIII 443 (535)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~----~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvv 443 (535)
....+ +|..+ ...+....... ....++|++++|+++|.|||+++|+++++|+|++||.|||||
T Consensus 413 ~~~~~-------p~~~~----~~av~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe~Gk~ADlvv 479 (479)
T cd01300 413 VAPPD-------PLLGI----WAAVTRKTPGGGVLGNPEERLSLEEALRAYTIGAAYAIGEEDEKGSLEPGKLADFVV 479 (479)
T ss_pred CCCCC-------HHHHH----HHHheeeCCCCCCCCCccccCCHHHHHHHHHHHHHHHhccccccccccCCcccceeC
Confidence 43211 22211 11110000000 023569999999999999999999988999999999999986
No 96
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.95 E-value=2.3e-25 Score=225.99 Aligned_cols=396 Identities=22% Similarity=0.262 Sum_probs=219.8
Q ss_pred EEEEccEEEcCCCc---eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccc--cCCC-CchhhhH
Q 009410 55 ILIKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME--FMGS-ETIDDFF 128 (535)
Q Consensus 55 ~vi~n~~vi~~~~~---~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~--~~g~-~~~~~~~ 128 (535)
++|+|++|+++... +.++|+|+||+|++|++... .+.++||++|++|+|||||+|+|+..+ +.+. ..++.+.
T Consensus 2 ~iIkng~I~dp~~~~~~~~~dI~IedGkIveIg~~~~--~~~eVIDa~G~vVmPGfID~HvHg~gG~~~~~R~~~pE~~~ 79 (556)
T TIGR03121 2 ILIKNGTVYDPANGIDGEVMDIFIRDGKIVEPVSGGT--KPAKVIDASGKLVMAGGVDSHTHIAGPKVNVGRLLRPEDHR 79 (556)
T ss_pred EEEEeEEEEcCCCCccccccEEEEECCEEEEecCCCC--CCCeEEECCCCEEEeCEEeeeECCCccccccccccCHHHHh
Confidence 68999999998643 35899999999999986533 246899999999999999999999874 1111 1222222
Q ss_pred ----------------------HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee---------
Q 009410 129 ----------------------SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI--------- 177 (535)
Q Consensus 129 ----------------------~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 177 (535)
.....+++.|+||++|+..++.. .+..-+++.. ...++-+.+.-.
T Consensus 80 ~~~~~~~~~~r~Gtt~~lPTt~tt~y~ya~mGyTt~~eaa~~p~~-arh~h~e~~~---~p~~d~~~~~~~gnn~~~~~~ 155 (556)
T TIGR03121 80 RDPEPRTGLTRAGSGFSVPSTYATGYRYARMGYTTVFEAAVPPLN-ARHTHEEFAD---TPILDKGGYTLLGNNWFLLEY 155 (556)
T ss_pred hcchhhhhhcCCCcceEehhHhHHHHHHHhCCccEEecCCCCccc-hhhhHHHhcc---CccccccceEEecchHHHHHH
Confidence 12245678999999999776553 2222222221 122222211111
Q ss_pred -ecCC-hhhHHHHHHHHHHcCCCEEEEEeecCC------------------CCcCC-HHHHHHHHHHHHhcCCe--EEEE
Q 009410 178 -TKWD-EVVSDEMEVMVKEKGINSFKFFMAYKG------------------SFMIN-DELLIEGFKRCKSLGAL--AMVH 234 (535)
Q Consensus 178 -~~~~-~~~~~~~~~~~~~~g~~~ik~~~~~~~------------------~~~~~-~~~l~~~~~~a~~~g~~--v~~H 234 (535)
...+ +.....+..+++..+.-++|+. ++.| .+.++ .+.++.+.++..+.|+| +++|
T Consensus 156 ~~~~~~~~~~~~vaw~l~~tk~~giK~v-npgG~~a~~~~~~~~~~d~~~~~~~vtp~~i~~~l~~~~e~l~lph~~h~H 234 (556)
T TIGR03121 156 LKDGEPEKAAAYVAWLLKATKGYGIKVV-NPGGVEAWGWGENVLSLDDPVPYFGITPREIIKGLARANEELGLPHSIHVH 234 (556)
T ss_pred HhcCCHHHHHHHHHHHHHhccceEEEEE-CCCchhhhccCCccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEe
Confidence 1111 2233444445545566777774 2221 12334 56677777888888987 5666
Q ss_pred cCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCC------EEEEEccC-----------HHHH
Q 009410 235 AENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP------LYVVHVMS-----------MDAM 297 (535)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~H~~~-----------~~~~ 297 (535)
+++. |..+ - .+...+.++..+ |.+ +|++|... ....
T Consensus 235 ~nnl-------------g~pg----------n--~~~t~~t~~~~~--g~~~~~~~~~h~tH~qf~syg~~~~~~f~s~a 287 (556)
T TIGR03121 235 CNNL-------------GVPG----------N--YETTLDTLDAAE--GVKPNRNQVLHLTHVQFHSYGGTSWRDFESGA 287 (556)
T ss_pred cCCC-------------CCCC----------c--hHHHHHHHHHhc--CCCCCccceeEeeeeeeeccCCCCCCCcchhH
Confidence 6543 2211 0 011111222211 333 67777631 1112
Q ss_pred HHHHHHHHcCCcEEeccccceE----eeCccc---------------ccCcCccccce---eEEcCCCCCcccHHHHH--
Q 009410 298 EEIAKARKAGQRVIGEPVVSGL----VLDDSW---------------LWHSDFVTAAK---YVMSPPIRASGHNKALQ-- 353 (535)
Q Consensus 298 ~~~~~~~~~g~~v~~~~~~~~~----~~~~~~---------------~~~~~~~~~~~---~~~~p~~r~~~~~~~~~-- 353 (535)
+.+..+-..+-.++.....-.+ .++.+. ..+.+...+++ +...+......-+-++-
T Consensus 288 ~~~a~~vn~~~~~t~d~Gqv~fg~t~tmt~d~~~~~~~~~~~~~kw~~~d~e~e~g~gvvp~~y~~~~~v~~~qwaigle 367 (556)
T TIGR03121 288 EKIADYVNANPNVTIDVGQVTFGETTTMTADGPMEYDLHKLTGLKWANKDVELETGSGVVPFKYSPKNPVHALQWAIGLE 367 (556)
T ss_pred HHHHHHHhcCCCEEEEeCceecCCceEEeccchhhhhcccCCCCceeeeeeecccCCceEEeeecCCCcchHHHHHHhhH
Confidence 3344444444444433221100 111100 01111111211 11111111122222333
Q ss_pred --HHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcc------hHHHHHHHH--HHHHH--------hcCCCCHHHHHHH
Q 009410 354 --AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN------GIEERMHLV--WDTMV--------ESGQISVTDYVRL 415 (535)
Q Consensus 354 --~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~------g~~~~l~~~--~~~~~--------~~~~ls~~eal~~ 415 (535)
-+.++-.++.+.|||+.. +||...|. +-..+-..+ +.+.+ -...+|++|++++
T Consensus 368 l~Ll~~dp~~~~~ttDhPng---------gpf~~YP~ii~~lm~~~~r~~~~~~~~~~~~~~~~l~~~~Re~sL~EI~~m 438 (556)
T TIGR03121 368 LFLLIKDPWRVFLTTDHPNG---------GPFTRYPRIIALLMSRKYREDMLSTVHPWAAARSTLGGIDREYSLYEIAIM 438 (556)
T ss_pred HHHhcCCcceeEEeccCCCC---------CcccchHHHHHHHcCHHHHHHHHHhcCHHHHhhcccccccCCCCHHHHHHH
Confidence 344567899999997542 36666665 111111111 00111 1445999999999
Q ss_pred HhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccC
Q 009410 416 TSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 416 ~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
+|.+||++||+. ++|+|++|+.|||+|+|.++....+ ....+. .....+++||++|++|+++|+++..+
T Consensus 439 tTanPAkaLGL~-dkG~L~pGa~ADIaI~D~~~~~~~~--------~~~~v~--~~~~~v~~Tik~G~vV~~dGei~~~~ 507 (556)
T TIGR03121 439 TRAGPAKLLGLT-DRGHLGVGADADIAVYDINPDDVDT--------DYADVE--KAFSTALYVFKDGEIVVKDGEIVETP 507 (556)
T ss_pred HHHHHHHHhCCC-CCCCcCCCCcCCEEEEeCcccccCC--------chHHHh--hccCCccEEEECCEEEEECCEEccCC
Confidence 999999999995 5799999999999999976543211 011111 11257899999999999999999865
Q ss_pred CCceEeecCC
Q 009410 496 GSGKYIEMRP 505 (535)
Q Consensus 496 ~~~~~~~~~~ 505 (535)
.|+.+.-.+
T Consensus 508 -~G~~~~~~~ 516 (556)
T TIGR03121 508 -WGRTYWVDA 516 (556)
T ss_pred -CCcEEEEec
Confidence 677776443
No 97
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.95 E-value=7.1e-26 Score=225.70 Aligned_cols=295 Identities=18% Similarity=0.179 Sum_probs=184.4
Q ss_pred eEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC
Q 009410 72 DVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING 151 (535)
Q Consensus 72 ~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~ 151 (535)
+|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+ +....+ ...+.++++||||++|+......
T Consensus 1 ~i~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~iD~H~H~~~~--g~~~~~---~~~~~a~~~GvTtvvd~~~~~~~ 75 (338)
T cd01307 1 DVAIENGKIAAVGAALAAPAATQIVDAGGCYVSPGWIDLHVHVYQG--GTRYGD---RPDMIGVKSGVTTVVDAGSAGAD 75 (338)
T ss_pred CEEEECCEEEEccCCCCCCCCCeEEECCCCEEecCeEEeeecCCCC--CcccCC---CHhHHHHcCceeEEEeCCCCCCC
Confidence 5899999999999865433457899999999999999999999876 432222 35677899999999999755544
Q ss_pred ChHHHHHHHHHHhcc---cccccceeeeeecCC-----hhhHHHHHHHHH--HcCCCEEEEEeecCCCCcCCHHHHHHHH
Q 009410 152 SLTAGFEAYEKKAKN---SCMDYGFHMAITKWD-----EVVSDEMEVMVK--EKGINSFKFFMAYKGSFMINDELLIEGF 221 (535)
Q Consensus 152 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~g~~~ik~~~~~~~~~~~~~~~l~~~~ 221 (535)
......+...+.... .+.+++++....... ....+.+.+..+ ..|+.++|.++...+........+++.+
T Consensus 76 ~~~~~~~~~~~~~~~~v~a~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~e~~~gi~gik~~~~~~~~~~~~~~~l~~~~ 155 (338)
T cd01307 76 NIDGFRYTVIERSATRVYAFLNISRVGLVAQDELPDPDNIDEDAVVAAAREYPDVIVGLKARASKSVVGEWGIKPLELAK 155 (338)
T ss_pred CHHHHHHHHHHhhhceEEEEEeeeccccccccccCChhHCCHHHHHHHHHHCcCcEEEEEEEeecccccccCCcHHHHHH
Confidence 444445555333322 444554443221110 111223333222 3578888988765443322344488999
Q ss_pred HHHHhcCCeEEEEcCChhh-HHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHH----
Q 009410 222 KRCKSLGALAMVHAENGDA-VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDA---- 296 (535)
Q Consensus 222 ~~a~~~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~---- 296 (535)
+.+++.|+++.+|++.... ..+.. .+.+ .+ ..+.|+.....
T Consensus 156 ~~a~~~~~pi~vH~~~~~~~~~~~~-------------------------------~~l~-~g--~~~~H~~~g~~~~~~ 201 (338)
T cd01307 156 KIAKEADLPLMVHIGSPPPILDEVV-------------------------------PLLR-RG--DVLTHCFNGKPNGIV 201 (338)
T ss_pred HHHHHcCCCEEEEeCCCCCCHHHHH-------------------------------HHhc-CC--CEEEeccCCCCCCCC
Confidence 9999999999999965432 11111 1111 12 24667665431
Q ss_pred ------HHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCC-eEEEeCCCC
Q 009410 297 ------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI-LQLVGTDHC 369 (535)
Q Consensus 297 ------~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv-~~~lgtD~~ 369 (535)
.+.+..+.+.|+.+..... ... ........+++.|+ +..++||..
T Consensus 202 ~~~~~~~~~~~~~~~~G~~~d~~~G-------------------~~~---------~~~~~~~~l~~~G~~~~~lstD~~ 253 (338)
T cd01307 202 DEEGEVLPLVRRARERGVIFDVGHG-------------------TAS---------FSFRVARAAIAAGLLPDTISSDIH 253 (338)
T ss_pred CCCCcHHHHHHHHHhCCEEEEeCCC-------------------CCc---------hhHHHHHHHHHCCCCCeeecCCcc
Confidence 1455666777755432110 000 00123556778887 568999963
Q ss_pred CCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCC
Q 009410 370 AFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS 448 (535)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~ 448 (535)
..... +.| ...+...++.+. ..+++++++++++|.|||++|++ +++|+|++|+.|||++++.+.
T Consensus 254 ~~~~~----------~~p---~~~l~~~l~~l~-~~gi~~ee~~~~~T~NpA~~lgl-~~~G~l~~G~~ad~~v~~~~~ 317 (338)
T cd01307 254 GRNRT----------NGP---VYALATTLSKLL-ALGMPLEEVIEAVTANPARMLGL-AEIGTLAVGYDADLTVFDLKD 317 (338)
T ss_pred ccCCC----------CCc---cccHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHcCC-CCCCccCCCCcCCEEEEeCCC
Confidence 21110 001 112333444442 34799999999999999999999 679999999999999999653
No 98
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.95 E-value=4.8e-26 Score=206.14 Aligned_cols=311 Identities=18% Similarity=0.249 Sum_probs=197.9
Q ss_pred CcccEEEEccEEEcCCCc--eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhH
Q 009410 51 SSSKILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~~--~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~ 128 (535)
|..+++|+|++++++... +..+|.|.||||++++ +.+.|.+.++||++|.+|.|||||.|+|.+.. +......-
T Consensus 2 mqfdiLLt~~rlidpa~g~d~~tniai~ngkIaa~~-d~~apa~tq~Ida~Gc~VspG~iDlHvHvy~g--gt~~~v~p- 77 (386)
T COG3964 2 MQFDILLTGGRLIDPARGIDEITNIAIINGKIAAAD-DYPAPAETQIIDADGCIVSPGLIDLHVHVYYG--GTEGGVRP- 77 (386)
T ss_pred CccceeeeCCeecccccccCccceeeeecCeEEecc-CcCCChhheEEccCccEeccCeeeeeeEEecC--CCccCcCH-
Confidence 457899999999987743 5789999999999999 66777779999999999999999999999876 32211111
Q ss_pred HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcc---cccccceeeeeecCCh------hhHHHHHHHHHHc--CC
Q 009410 129 SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN---SCMDYGFHMAITKWDE------VVSDEMEVMVKEK--GI 197 (535)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~--g~ 197 (535)
-....++||||++|.+..+..+.....+...+.... .++++++.. ....++ =..+++....++. -.
T Consensus 78 --d~~ga~~GvTTvVDAGSaGaanf~gF~r~vie~Sr~RI~Aflnvs~~G-l~a~nE~~d~~nid~d~i~aa~reh~d~i 154 (386)
T COG3964 78 --DMYGAPNGVTTVVDAGSAGAANFDGFYRTVIEASRVRIKAFLNVSPPG-LTASNELYDPDNIDEDKIHAAFREHRDVI 154 (386)
T ss_pred --HHccccCCceEEEecCCcCccchhhHHHHhhcchhheeeeeeeccCcc-eeeehhhCChhhCCHHHHHHHHHhCcCcE
Confidence 244678999999999776665555555555544432 344433222 111111 0133444444332 23
Q ss_pred CEEEEEeecC--CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhh-HHHHHHHHHHcCCCCcccccccCChhhHHHHHHH
Q 009410 198 NSFKFFMAYK--GSFMINDELLIEGFKRCKSLGALAMVHAENGDA-VFEGQKRMIELGITGPEGHALSRPPLLEGEATTR 274 (535)
Q Consensus 198 ~~ik~~~~~~--~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 274 (535)
.++|+-++.. |.+.++ -+...++.|++.++|+.+|..++.. ..+.+..+.
T Consensus 155 vGlKvR~s~~~~g~~Git--Pl~la~~ia~~~klPlmvHigePp~~~dEvlerL~------------------------- 207 (386)
T COG3964 155 VGLKVRVSTEDIGEYGIT--PLTLALRIANDLKLPLMVHIGEPPVLMDEVLERLR------------------------- 207 (386)
T ss_pred EEEEEEeeeccccccCCc--hHHHHHHHHhhcCCceEEecCCCCccHHHHHHhcc-------------------------
Confidence 3455544432 333334 3666777888999999999966543 233333221
Q ss_pred HHHHHHhcCCCEEEEEccCH----------HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCC
Q 009410 275 AIRLAEFVNTPLYVVHVMSM----------DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIR 344 (535)
Q Consensus 275 ~~~~~~~~~~~~~~~H~~~~----------~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 344 (535)
.-=+++||... .-....++++.+|+..-..-.. ..
T Consensus 208 ---------~GDIitHcfngkpn~~l~~dg~vr~~vrra~erGV~fD~ghG~------------------as-------- 252 (386)
T COG3964 208 ---------RGDIITHCFNGKPNTILTDDGVVRAEVRRARERGVIFDAGHGR------------------AS-------- 252 (386)
T ss_pred ---------CCceeeeeccCCCCCccccchhHHHHHHHHHhcceEEEccCCc------------------ce--------
Confidence 11145666432 1124455666677554332111 01
Q ss_pred CcccHHHHHHHHhcC-CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHH
Q 009410 345 ASGHNKALQAALATG-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARI 423 (535)
Q Consensus 345 ~~~~~~~~~~~l~~G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~ 423 (535)
....-.+.++..| .+..|+||-...+.-. |-...+...+.+++.- |+++.++++++|.|||..
T Consensus 253 --fsf~vAr~aia~GllP~~ISSDlh~~~~~n-------------~Pv~dla~~mSKllal-gmpl~~Vi~avT~npA~~ 316 (386)
T COG3964 253 --FSFNVARRAIANGLLPDIISSDLHTITKLN-------------GPVYDLAWIMSKLLAL-GMPLTDVINAVTHNPAVL 316 (386)
T ss_pred --eeHHHHHHHHhcCCCcceeeccceeeeecC-------------chHHHHHHHHHHHHHc-CCcHHHHHHHHhcCHHHH
Confidence 1113356677777 4688999943332111 1123455556566655 599999999999999999
Q ss_pred cCCCCCCccccCCCCccEEEEcCC
Q 009410 424 FNVYPRKGAILVGSDADIIIFNPN 447 (535)
Q Consensus 424 lgl~~~~GsI~~Gk~ADlvvld~~ 447 (535)
+++ +..|+|+||..||++|++..
T Consensus 317 i~l-~~~gtLa~G~~aD~tvf~lk 339 (386)
T COG3964 317 IGL-AEIGTLAPGAFADITVFKLK 339 (386)
T ss_pred hCc-cccCccCCCcccceEEEEec
Confidence 999 58999999999999999854
No 99
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=99.95 E-value=1.4e-25 Score=205.48 Aligned_cols=344 Identities=18% Similarity=0.222 Sum_probs=197.9
Q ss_pred EEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC----CCCc--hhhhHH
Q 009410 56 LIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM----GSET--IDDFFS 129 (535)
Q Consensus 56 vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~----g~~~--~~~~~~ 129 (535)
+|.|++|+..+.+-+++|+|+||+|..|.+.... ...-||++|.+++|||||+|+--...++ |-.+ ...+..
T Consensus 2 ~lsnarivl~D~v~~gsv~i~DG~Ia~i~~g~s~--~~~~~d~eGd~LLPGlIeLHtD~lE~~~~PRPgV~wp~~aAi~a 79 (377)
T COG3454 2 ILSNARIVLEDRVVNGSVLIRDGLIADIDEGISP--LAAGIDGEGDYLLPGLIELHTDNLERFMTPRPGVRWPPIAAILA 79 (377)
T ss_pred ccccceEEeecceeeeeEEEecceEeeeccccCc--ccccccCCCCeecccchhhcchhhhcccCCCCCCCCCchHHHHH
Confidence 6889999998888889999999999999876542 2667999999999999999995443321 1111 122333
Q ss_pred HHHHHHhCCcEEEeccccCCCC--------ChHHHHHHHHHHh--cccccccceeeeeecCChhhHHHHHHHHHHcCCCE
Q 009410 130 GQAAALAGGTTMHIDFVIPING--------SLTAGFEAYEKKA--KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 199 (535)
.-...+.+||||++|....++. ...+.++...... .+...+..+|....-...+..+.+.++........
T Consensus 80 hD~~l~~sGITTv~dal~iGd~~~gg~r~~~~~~midaI~~~~~~g~lradHr~HlRcEvs~~~~l~~~e~~~~~p~v~L 159 (377)
T COG3454 80 HDAQLAASGITTVLDALAIGDVRDGGLRLENLRKMIDAIEEAQAAGRLRADHRLHLRCEVSHPATLPLFEDLMDHPRVKL 159 (377)
T ss_pred hhHHHHhcChhhHHhhhhcCcccCCccchHHHHHHHHHHHHHHhccchhhccceeeeeecCChhHHHHHHHHhcCCCeeE
Confidence 3455689999999987442221 4455555555532 33455666676666666667777877775566666
Q ss_pred EEEEeecCCC----------------CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccC
Q 009410 200 FKFFMAYKGS----------------FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSR 263 (535)
Q Consensus 200 ik~~~~~~~~----------------~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 263 (535)
+.++=..+|. ..++++.+.+.++.-...... ..........+.+...|+.-.. |
T Consensus 160 iSlMDH~PGQrQf~~le~Y~~yy~~k~~~s~~e~~~~i~~r~a~~~~-----y~~~~r~~i~~~c~~rgI~lAS-H---- 229 (377)
T COG3454 160 ISLMDHTPGQRQFANLEKYREYYQGKRGLSDEEFAEFIEERQALSAR-----YSDPNRQAIAALCRERGIALAS-H---- 229 (377)
T ss_pred EEecCCCCCcchhhhHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHhh-----cccchHHHHHHHHHHcCCceec-C----
Confidence 6654322222 223333333222221110000 0000001111111111221100 0
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCC
Q 009410 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPI 343 (535)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 343 (535)
.++..+-++.....| +.+.-+. ...+..+..++.|+.|.... | |.-.|.
T Consensus 230 -----DDaT~~hV~es~~~G--v~iAEFP--tT~eAA~asr~~Gm~VlMGA-P-------------NivrGg-------- 278 (377)
T COG3454 230 -----DDATVEHVAESHGLG--VAIAEFP--TTVEAAKASRELGMQVLMGA-P-------------NIVRGG-------- 278 (377)
T ss_pred -----CcCcHHHHHHHHhcC--eeEEeCc--cHHHHHHHHHHhCchhhcCC-C-------------ceeccC--------
Confidence 001111111112222 2233332 22345555566666554321 1 111111
Q ss_pred CCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHH
Q 009410 344 RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARI 423 (535)
Q Consensus 344 r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~ 423 (535)
+.....+..++.+.|+...++||+.|.+.- ...+.-.-....+++.||+++.|.|||++
T Consensus 279 -SHsGNvsA~ela~~glLDiLsSDY~P~SLl--------------------~A~F~La~~~~~~~lpqAvalvt~nPA~a 337 (377)
T COG3454 279 -SHSGNVSARELAQHGLLDILSSDYVPASLL--------------------HAAFRLADLGSNISLPQAVALVTKNPARA 337 (377)
T ss_pred -CcccchhHHHHHhCCceeeecccCCcHHHH--------------------HHHHHHhhhhcccCHHHHHHHhccCHHHh
Confidence 112235578899999999999998774221 12221111233468999999999999999
Q ss_pred cCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEE
Q 009410 424 FNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVW 486 (535)
Q Consensus 424 lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~ 486 (535)
+|+. ++|+|++|++||||.+..+.. ...|+.||+.|+.|+
T Consensus 338 lgl~-DRG~Ia~GlrADlv~v~~~~~----------------------vp~ir~vwr~G~rv~ 377 (377)
T COG3454 338 LGLT-DRGRIAPGLRADLVRVRRDGG----------------------VPVIRTVWRAGKRVA 377 (377)
T ss_pred cCCC-cccccccccccceEEEecCCC----------------------CceeeeeeecceecC
Confidence 9995 899999999999998875432 137999999999874
No 100
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=99.95 E-value=1.9e-25 Score=220.34 Aligned_cols=324 Identities=14% Similarity=0.126 Sum_probs=234.7
Q ss_pred EEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-cc--ccccceeeee
Q 009410 102 FVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NS--CMDYGFHMAI 177 (535)
Q Consensus 102 ~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~--~~~~~~~~~~ 177 (535)
+.+|-=-|+|+|+.+. .+.....-+...|||++++|....+. .....++....... .. .+++.++.++
T Consensus 2 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~vt~vv~mPnt~P~~~~~e~~~~~~~~~~~~s~~~vDf~~~~~v 73 (341)
T TIGR00856 2 LTIRRPDDWHLHLRDG--------AMLKAVLPYTSEIFSRAIVMPNLAPPVTTVEAAVAYRERILDAVPAGHDFTPLMTL 73 (341)
T ss_pred ceecCccceeeeccCc--------hHHHHHHHHHHhhcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcceEEEEEE
Confidence 3567778999999876 22233344567789999999654433 23445555444433 33 3578877777
Q ss_pred ecCChhhHHHHHHHHHHcCCCEEEEEeecCC----CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009410 178 TKWDEVVSDEMEVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (535)
........+++.++.+..|+.++|+|+...+ ....++..+.++++.+++.|+++.+|+++.......
T Consensus 74 ~~~~~~~~~Ei~~l~~~~Gv~g~Klf~~~~~~~~~~~v~dd~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~--------- 144 (341)
T TIGR00856 74 YLTDSLTPEELERAKNEGVVRAVKLYPAGATTNSSHGVTDIDAIMPVLEAMEKIGLPLLLHGEVTHGDIDI--------- 144 (341)
T ss_pred ECCCCCCHHHHHHHHHcCCeEEEEEccCCcccCCCcCCCCHHHHHHHHHHHHHcCCeEEEeecCCCCCccc---------
Confidence 5444435677877764459999999865321 112355889999999999999999999875210000
Q ss_pred CCcccccccCChhhHHHHHH-HHHHHHH-hcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCc
Q 009410 254 TGPEGHALSRPPLLEGEATT-RAIRLAE-FVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDF 331 (535)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 331 (535)
...+...+. .+..++. ..+.++++.|.++...++.+..++. .|++++++||++++.+.+....
T Consensus 145 -----------~~~e~~a~~~~i~~lA~~~~~~~~~i~H~st~~~~~~i~~a~~---~vt~E~~ph~L~l~~~~~~~~~- 209 (341)
T TIGR00856 145 -----------FDREARFIESVLEPLRQRFPALKVVLEHITTKDAIDYVEDGNN---RLAATITPQHLMFTRNDLLGGG- 209 (341)
T ss_pred -----------ccchhhhhHHHHHHHHHHccCCeEEEEecCcHHHHHHHHHcCC---CEEEEEcHHHHhccHHHHhccC-
Confidence 000122233 3334554 4489999999999988777766532 3999999999999998764311
Q ss_pred cccceeEEcCCCCCcccHHHHHHHHhcCCeE-EEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCC
Q 009410 332 VTAAKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQI 407 (535)
Q Consensus 332 ~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~-~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~l 407 (535)
.+..++++||+|...+++++|+.+.+|... .++|||+|++...+.. + .+|+ |++..++.++. ..+. ++
T Consensus 210 -~~~~~k~~PPlR~~~d~~aL~~~l~~G~id~~i~SDHaP~~~~~K~~---~--~~~~G~~g~e~~l~~~~~-~~~~-~~ 281 (341)
T TIGR00856 210 -VNPHLYCLPILKRNIHQQALLELAASGFPKFFLGTDSAPHARHRKES---S--CGCAGCFSAPTALPSYAE-VFEE-MN 281 (341)
T ss_pred -CCCceEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChhHcCC---C--CCCCCcccHHHHHHHHHH-HHhc-CC
Confidence 247899999999999999999999999999 6999999998777642 1 2443 88988888774 3444 79
Q ss_pred CHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCC-CeeEeeEE
Q 009410 408 SVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYE-GRRVKGKV 475 (535)
Q Consensus 408 s~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~-~~~~~~~v 475 (535)
+++++++..+.|||++||+ ++ | .|||+|+ +..|.++++++.++..|+||+ |..+.++|
T Consensus 282 ~l~~~v~~~s~nPAk~~gl-~~-~------dAdi~~~--~~~~~i~~~~~~s~~~~sp~~~~~~~~~~v 340 (341)
T TIGR00856 282 ALENLEAFCSDNGPQFYGL-PV-N------STKIELV--KKEQQIPESIALTDDTLVPFRAGETLSWSV 340 (341)
T ss_pred CHHHHHHHHhHhHHHHhCC-CC-C------CceEEEE--eccEEeCchhccCCCCcccccCCcccceee
Confidence 9999999999999999999 33 4 8999999 589999999999999999994 55444444
No 101
>PRK05451 dihydroorotase; Provisional
Probab=99.94 E-value=3.5e-25 Score=219.71 Aligned_cols=324 Identities=15% Similarity=0.160 Sum_probs=225.1
Q ss_pred EEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHh-cc--cccccceeeee
Q 009410 102 FVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KN--SCMDYGFHMAI 177 (535)
Q Consensus 102 ~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~--~~~~~~~~~~~ 177 (535)
+-+|=-||+|+|+... .+..++. ...+.++|++++|....+. .....++...... .. ..+++.++.++
T Consensus 5 ~~~~~~~d~h~hl~~~----~~~~~~~----~~~~~~~t~~v~mPnt~P~~~~~~~l~~~~~~a~~~~~~~~d~~~~~~i 76 (345)
T PRK05451 5 LTIRRPDDWHLHLRDG----AMLKAVV----PYTARQFGRAIVMPNLVPPVTTVAQALAYRERILAALPAGSNFEPLMTL 76 (345)
T ss_pred EEecCcceEEEecCCc----hHHHHHH----HHHHHhcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCCcEEEEEEE
Confidence 5578889999999853 2222333 3344679999999643222 2344444444433 22 22455555555
Q ss_pred ecCChhhHHHHHHHHHHcC-CCEEEEEeecCC----CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcC
Q 009410 178 TKWDEVVSDEMEVMVKEKG-INSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (535)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g-~~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g 252 (535)
.....+..+++.++. +.| ..++|+|+.+.+ ....+++.+.++++.+.+.|+++.+|+++........
T Consensus 77 ~~~~~~~~~El~~~~-~~Gvv~g~Kl~~~~~~~~~~~~~~dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~------- 148 (345)
T PRK05451 77 YLTDNTDPDELERAK-ASGVVTAAKLYPAGATTNSDAGVTDIEKIYPVLEAMQKLGMPLLVHGEVTDPDIDIF------- 148 (345)
T ss_pred EeCCCCCHHHHHHHH-HCCCEEEEEEecccCccCCccCcCCHHHHHHHHHHHHHcCCEEEEecCCCCcccccc-------
Confidence 444333457777776 678 459999976421 1122678899999999999999999998743200000
Q ss_pred CCCcccccccCChhhHHHHHHHH-HHHHHhc-CCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcC
Q 009410 253 ITGPEGHALSRPPLLEGEATTRA-IRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (535)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (535)
..+...+.+. .+++..+ +.++++.|+++.+.++.+.. .+.+|++++++||++++.+.+...+
T Consensus 149 -------------~~e~~~~~~~l~~lA~~~pg~~lhI~Hlst~~~~e~i~~---a~~~it~Et~ph~L~l~~~~~~~~~ 212 (345)
T PRK05451 149 -------------DREAVFIDRVLEPLRRRFPKLKIVFEHITTKDAVDYVRE---ANDNLAATITPHHLLINRNDMLVGG 212 (345)
T ss_pred -------------cchHHHHHHHHHHHHHhcCCCcEEEEecCcHHHHHHHHh---cCCCEEEEecHHHHhcCHHHHhCCC
Confidence 0012223343 4477666 99999999999877665544 3678999999999999988764322
Q ss_pred ccccceeEEcCCCCCcccHHHHHHHHhcCCeE-EEeCCCCCCChhhhhc--CCCCcccCcchHHHHHHHHHHHHHhcCCC
Q 009410 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAF--GIDDFRKIPNGIEERMHLVWDTMVESGQI 407 (535)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~-~lgtD~~~~~~~~~~~--~~~~~~~~~~g~~~~l~~~~~~~~~~~~l 407 (535)
.+..++++||+|...+++++|+.+..|... +++|||+|+....+.. +...++.++. .++.++. ++... .
T Consensus 213 --~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~~i~SDHaP~~~~~K~~~~G~~gi~~~~~----g~~~~~~-~~~~~-~ 284 (345)
T PRK05451 213 --IRPHLYCLPILKRETHRQALREAATSGNPKFFLGTDSAPHARHAKESACGCAGIFSAPA----ALELYAE-VFEEA-G 284 (345)
T ss_pred --cCCCeEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChHHhCCCCCCCchhhHHH----HHHHHHH-HHHcC-C
Confidence 246789999999999999999999999999 8999999998777642 1112222222 2333332 23344 4
Q ss_pred CHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCC-CCeeEeeEE
Q 009410 408 SVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVY-EGRRVKGKV 475 (535)
Q Consensus 408 s~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~-~~~~~~~~v 475 (535)
+++++++..+.|||++||+..++|+|.+| +..|.++++.+.++..|+|| .|..+.++|
T Consensus 285 ~l~~~v~~~s~nPAkifGl~~~KG~i~~~----------~~~~~v~~~~~~s~~~~sp~~~~~~~~~~~ 343 (345)
T PRK05451 285 ALDKLEAFASLNGPDFYGLPRNTDTITLV----------REPWTVPESIPFGDETVVPFRAGETLRWSV 343 (345)
T ss_pred CHHHHHHHHhHHHHHHhCCCCCCCeEEEE----------ecceecCcccccCCCceeeecCCceeeeEe
Confidence 99999999999999999998889999877 68899999999999999999 455555555
No 102
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.94 E-value=5.6e-24 Score=214.51 Aligned_cols=334 Identities=20% Similarity=0.207 Sum_probs=182.0
Q ss_pred cEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCC-CEEeecccccccccccccCCCCchhhhHHHHH
Q 009410 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATG-KFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G-~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~ 132 (535)
+++|+|++|+++. ..+|+|+||||++|++.... .+.++||++| ++|+|||||+|+|+... +....++. ..
T Consensus 2 ~~~i~n~~i~~~~---~~~v~i~~g~I~~v~~~~~~-~~~~~iD~~g~~~l~PG~ID~H~H~~~~--~~~~~~~~---~~ 72 (365)
T TIGR03583 2 DLLIKNGRTVNGT---PVDIAIEDGKIAAVGTTITG-SAKQTIDLEGETYVSAGWIDDHTHCFPK--SALYYDEP---DE 72 (365)
T ss_pred cEEEECcEEecCC---eeEEEEECCEEEEecCCCCC-CCCeEEECCCCeEEecCEEEeeeccCCC--cccccCCH---hH
Confidence 5899999999853 45999999999999875432 2468999999 99999999999999754 22233333 23
Q ss_pred HHHhCCcEEEeccccCCCCChHHHHHHHHHHhccc--ccccceeeeeec-C----ChhhHHHHHHHHHH-c-CCCEEEEE
Q 009410 133 AALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNS--CMDYGFHMAITK-W----DEVVSDEMEVMVKE-K-GINSFKFF 203 (535)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~----~~~~~~~~~~~~~~-~-g~~~ik~~ 203 (535)
.++++|||+++++............+.......+. .++.......+. . .....+++.++.+. . +..++|.+
T Consensus 73 ~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~vv~~~~~ 152 (365)
T TIGR03583 73 IGVKTGVTTVVDAGSTGADDIDDFYRLAQQAKTNVFALLNISRIGLVAQDELADLSNLDASAVKQAVERYPDFIVGLKAR 152 (365)
T ss_pred hhhcCceeEEEeCCCCCCCCHHHHHHHHHhhCCcEEEEeeehhccccChhhhhChHHhHHHHHHHHHHhCcCcEEEEEEe
Confidence 46889999999975433333333333332222121 111111111111 0 11233444444422 2 24455666
Q ss_pred eecC--CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhh-HHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHH
Q 009410 204 MAYK--GSFMINDELLIEGFKRCKSLGALAMVHAENGDA-VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAE 280 (535)
Q Consensus 204 ~~~~--~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (535)
++.. +...+++..+.+.+..+ +.++++.+|+..... ..+..+. ...
T Consensus 153 ~t~~~i~E~gl~~~~~~~~l~~~-~~~~pv~vH~~~a~~~~~~i~~~-~~~----------------------------- 201 (365)
T TIGR03583 153 MSKSVVGDNGIEPLEIAKQIQQE-NLELPLMVHIGSAPPELDEILAL-MEK----------------------------- 201 (365)
T ss_pred ecccccccCCcCHHHHHHHHHHh-cCCCcEEEEeCCCccCHHHHHHH-hcC-----------------------------
Confidence 6632 11223355555555554 789999999976532 2222211 111
Q ss_pred hcCCCEEEEEccCHHH----------HHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHH
Q 009410 281 FVNTPLYVVHVMSMDA----------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNK 350 (535)
Q Consensus 281 ~~~~~~~~~H~~~~~~----------~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~ 350 (535)
+ . .+.|+.+... .+.+....+.|+.+...-... + ....
T Consensus 202 --g-~-~~~H~fng~~~~~~r~~g~~~~~~~~~l~~G~i~d~~hg~~------------------------~----~~~~ 249 (365)
T TIGR03583 202 --G-D-VLTHCFNGKPNGILRETGEVKPSVLEAYNRGVILDVGHGTA------------------------S----FSFH 249 (365)
T ss_pred --C-C-eeeeeecCCCCCCCCCcchHHHHHHHHHhCeEEEEeCCCCC------------------------C----chHH
Confidence 1 1 2455543221 123333444454333210000 0 0001
Q ss_pred HHHHHHhcCC-eEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCC
Q 009410 351 ALQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPR 429 (535)
Q Consensus 351 ~~~~~l~~Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~ 429 (535)
....+...++ .++.++|. +. . +..+|....+...++.++. .|++++++++++|.|||++||++ +
T Consensus 250 ~~~~~~~~~~~~~td~~d~-~~--~----------~~~~gp~~~l~~~~~~~~~-~g~~~~ea~~~~t~npa~~~gl~-~ 314 (365)
T TIGR03583 250 VAEKAKRAGIFPDTISTDI-YI--R----------NRINGPVYSLATVMSKFLA-LGYSLEEVIEKVTKNAAEILKLT-Q 314 (365)
T ss_pred HHHHHHhCCCCCccccccc-cc--C----------CCccCccccHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhCCC-C
Confidence 1222333332 23333442 10 0 0000112235555555554 47999999999999999999995 4
Q ss_pred CccccCCCCccEEEEcCCCc-eeeecCCccccCCCCCCCCeeEee----EEEEEEECCEEE
Q 009410 430 KGAILVGSDADIIIFNPNSS-FEITARSHHSRLDTNVYEGRRVKG----KVEVTIAGGRVV 485 (535)
Q Consensus 430 ~GsI~~Gk~ADlvvld~~~~-~~i~~~~~~~~~~~~p~~~~~~~~----~v~~v~~~Gr~V 485 (535)
.|+|++|+.|||+++|.++. ..+. -.+|..+.. .++.|+++|++.
T Consensus 315 ~g~i~~g~~ad~~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~~~~~~~~~ 364 (365)
T TIGR03583 315 KGRLQEGYDADLTIFTVKAEPKKLT-----------DSEGDSRIAEEQIKPLAVIIGGEYY 364 (365)
T ss_pred CCCcCCCCcccEEEEecCCCCceee-----------cCCCCEEEeccccceEEEEECCEEe
Confidence 89999999999999997432 1111 122333232 467899999864
No 103
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.93 E-value=6.5e-24 Score=217.30 Aligned_cols=282 Identities=21% Similarity=0.254 Sum_probs=182.4
Q ss_pred ecCCCEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccC-CCCChHHHHHHHHHHhcccccccceee
Q 009410 97 DATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIP-INGSLTAGFEAYEKKAKNSCMDYGFHM 175 (535)
Q Consensus 97 D~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (535)
|++|++|+|||||+|+|+..+ + .+++. ..+.++++||||++++... .+....+.++...+...+...++.+..
T Consensus 1 Da~G~~v~PG~ID~H~Hi~~~--~-~~~~~---~~~~a~~~GvTtvv~~p~~~~~v~g~~~~~~~~~~a~~~p~~~~~~~ 74 (422)
T cd01295 1 DAEGKYIVPGFIDAHLHIESS--M-LTPSE---FAKAVLPHGTTTVIADPHEIANVAGVDGIEFMLEDAKKTPLDIFWML 74 (422)
T ss_pred CCCCCEEccCEEEccCCcCCC--C-CChHH---HHHHHHCCCcEEEEeCCCCCCcCCCHHHHHHHHHHHhCCCceEEEeC
Confidence 789999999999999999876 2 33333 3678899999999986422 222455666666665544444443322
Q ss_pred ee----ecC--Chh--hHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHH
Q 009410 176 AI----TKW--DEV--VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (535)
Q Consensus 176 ~~----~~~--~~~--~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~ 247 (535)
+. +.. .+. ..+++.++.+..++.+++.+++|++. ..+.+.+.+.++.|++.|+++.+|+..... ..+..
T Consensus 75 p~~vp~t~~e~~g~~~~~~~i~~l~~~~~vvglgE~md~~~v-~~~~~~l~~~i~~A~~~g~~v~~Ha~g~~~--~~L~a 151 (422)
T cd01295 75 PSCVPATPFETSGAELTAEDIKELLEHPEVVGLGEVMDFPGV-IEGDDEMLAKIQAAKKAGKPVDGHAPGLSG--EELNA 151 (422)
T ss_pred CCcCCCCCCCCCCCcCCHHHHHHHhcCCCCcEEEEeccCccc-cCCcHHHHHHHHHHHhCCCEEEEeCCCCCH--HHHHH
Confidence 21 111 111 36677777744689999988887653 336778999999999999999999976541 22222
Q ss_pred HHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCccccc
Q 009410 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW 327 (535)
Q Consensus 248 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 327 (535)
+.+.|.. ..|+....+ +.++++ +.|+.+...+...
T Consensus 152 ~l~aGi~---------------------------------~dH~~~~~e-ea~e~l-~~G~~i~i~~g~~---------- 186 (422)
T cd01295 152 YMAAGIS---------------------------------TDHEAMTGE-EALEKL-RLGMYVMLREGSI---------- 186 (422)
T ss_pred HHHcCCC---------------------------------CCcCCCcHH-HHHHHH-HCCCEEEEECccc----------
Confidence 2222221 136665554 555555 5787665432210
Q ss_pred CcCccccceeEEcCCCCCcccHHHHHHHHh--cCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcC
Q 009410 328 HSDFVTAAKYVMSPPIRASGHNKALQAALA--TGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESG 405 (535)
Q Consensus 328 ~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~--~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~ 405 (535)
..+...+.+.+. .+.+++++||.... ... .. ...+....+... ..
T Consensus 187 ------------------~~~~~~~~~~l~~~~~~~i~l~TD~~~~-~~~-------~~------~g~~~~v~r~a~-~~ 233 (422)
T cd01295 187 ------------------AKNLEALLPAITEKNFRRFMFCTDDVHP-DDL-------LS------EGHLDYIVRRAI-EA 233 (422)
T ss_pred ------------------HhhHHHHHHhhhhccCCeEEEEcCCCCc-hhh-------hh------cchHHHHHHHHH-Hc
Confidence 001111222222 47899999997421 111 00 012233333333 34
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEE
Q 009410 406 QISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVV 485 (535)
Q Consensus 406 ~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V 485 (535)
++++++|++++|.|||+++|+ +++|+|++|+.|||++++... .-+|..||++|+.|
T Consensus 234 g~s~~eal~~aT~n~A~~~gl-~~~G~i~~G~~AD~vv~~~~~-----------------------~~~v~~v~~~G~~v 289 (422)
T cd01295 234 GIPPEDAIQMATINPAECYGL-HDLGAIAPGRIADIVILDDLE-----------------------NFNITTVLAKGIAV 289 (422)
T ss_pred CCCHHHHHHHHhHHHHHHcCC-CCCcccCCCCcCCEEEECCCC-----------------------CCceEEEEECCeEE
Confidence 699999999999999999999 778999999999999998311 12789999999999
Q ss_pred EECC
Q 009410 486 WEND 489 (535)
Q Consensus 486 ~~~~ 489 (535)
|+.-
T Consensus 290 ~~r~ 293 (422)
T cd01295 290 VERH 293 (422)
T ss_pred EEec
Confidence 9753
No 104
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=99.92 E-value=5.1e-23 Score=193.18 Aligned_cols=344 Identities=19% Similarity=0.248 Sum_probs=218.9
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCC----------CCCceEEecCCCEEeecccccccccccccCCC
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV----------GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS 121 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~----------~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~ 121 (535)
..|++|+|+.|+|-.++...+|-|+||||.+||+...+ ...+++|.++|++|.-|=||.|+|+-.+
T Consensus 66 ~~D~VITNa~IiD~~Gi~KADiGikdGrI~~IGKaGNPd~~dgV~iiiG~sTe~iagEg~I~TAGGiDtHiHfI~P---- 141 (568)
T COG0804 66 ALDLVITNALIIDYWGIVKADIGIKDGRIAGIGKAGNPDIMDGVTIIIGPSTEIIAGEGKIVTAGGIDTHIHFICP---- 141 (568)
T ss_pred cccEEEeeeEEEeccceEEeecccccceEEEeecCCCCCccCCceEEeccccceecCCceEEeeccccceeEEecH----
Confidence 57899999999999888999999999999999974321 2357899999999999999999998755
Q ss_pred CchhhhHHHHHHHHhCCcEEEecccc-CCCC-------ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHH
Q 009410 122 ETIDDFFSGQAAALAGGTTMHIDFVI-PING-------SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (535)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (535)
+....++++||||++--+. |... ...-.+..+.+.....++++++..-. +......+.+.+
T Consensus 142 -------qqi~~Al~sGiTtmiGGGtGpa~Gt~aTT~TpG~w~i~rMl~a~d~~p~N~g~lgKG---n~s~~~~L~Eqi- 210 (568)
T COG0804 142 -------QQIEEALASGITTMIGGGTGPADGTNATTCTPGPWHIARMLQAADGLPMNIGFLGKG---NASNPAPLAEQI- 210 (568)
T ss_pred -------HHHHHHHhcCcEEEecCccCCCCCcccccccCCHHHHHHHHHhhhcCceeeEEeecC---CCCCchhHHHHH-
Confidence 1256789999999985432 2221 34555666666666677787775422 222234455666
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHH
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 273 (535)
+.|+.++|+.-++ ..++..+...+..|.++.+++.+|..+.++.....+.+
T Consensus 211 ~aGa~GlKlHEDW----G~TpaaI~~~L~VAD~~DvqVaiHtDTLNEsGfvEdTi------------------------- 261 (568)
T COG0804 211 EAGAIGLKLHEDW----GATPAAIDTCLSVADEYDVQVAIHTDTLNESGFVEDTI------------------------- 261 (568)
T ss_pred hhccceeEeeccc----CCCHHHHHHHHhhhhhhceEEEEeecccccccchHhHH-------------------------
Confidence 7899999996554 46899999999999999999999986655432222111
Q ss_pred HHHHHHHhcCCCEEEEEccCHH---HHHHHHHHHHcCC-cEEecccc-ce-------E-------eeCcccccCcCcccc
Q 009410 274 RAIRLAEFVNTPLYVVHVMSMD---AMEEIAKARKAGQ-RVIGEPVV-SG-------L-------VLDDSWLWHSDFVTA 334 (535)
Q Consensus 274 ~~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~~~g~-~v~~~~~~-~~-------~-------~~~~~~~~~~~~~~~ 334 (535)
+...+..+|..|...+. +-+.++.....++ +-+..|+. +. + ++++...++.-|.
T Consensus 262 -----~A~~gRtIHtyHtEGAGGGHAPDiikv~~~~NvLPsSTNPT~PytvNT~~EhlDMlMVcHhL~p~ipeDvaFA-- 334 (568)
T COG0804 262 -----AAIKGRTIHTYHTEGAGGGHAPDIIKVAGQPNVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPRIPEDVAFA-- 334 (568)
T ss_pred -----HHhcCceeEEeeccCCCCCCccHHHHHccCCCcCcCCCCCCCCcccccHHHhhhhhhhhccCCCCCcchhhhh--
Confidence 12234455666654322 2234443333332 11112221 10 0 1222221111111
Q ss_pred ceeEEcCCCCCcccHHHHHH-HHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHH-hcC-------
Q 009410 335 AKYVMSPPIRASGHNKALQA-ALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMV-ESG------- 405 (535)
Q Consensus 335 ~~~~~~p~~r~~~~~~~~~~-~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~-~~~------- 405 (535)
..|...+..+... +++-|+.-.++||+..-..-... . ...+...- ++- ..+
T Consensus 335 -------eSRIR~eTIAAEdiLhDmGafSmisSDSQAMGRvGEv-----i-------~RtwQtA~-kmK~qrG~L~~d~~ 394 (568)
T COG0804 335 -------ESRIRPETIAAEDILHDMGAFSMISSDSQAMGRVGEV-----I-------TRTWQTAD-KMKKQRGALPEDAG 394 (568)
T ss_pred -------hhccchhhhhHHHHHhhccceEEeccchHhhhccchh-----h-------hhHHHHHH-HHHHhcCCCCCCCC
Confidence 1222222333333 56679999999997543222100 0 00011000 110 111
Q ss_pred ---CCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECC
Q 009410 406 ---QISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGG 482 (535)
Q Consensus 406 ---~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~G 482 (535)
.+-...-+...|+|||-..|+++.+||+|+||.||||+|++. |.| -++..|+++|
T Consensus 395 ~nDN~RvkRYiaKyTINPAIthGis~~vGSvEvGK~ADlVLW~Pa------------------FFG----vKP~~vlkgG 452 (568)
T COG0804 395 GNDNFRVKRYIAKYTINPAITHGISHEVGSVEVGKLADLVLWDPA------------------FFG----VKPELVLKGG 452 (568)
T ss_pred CCccHHHhhhhhheecCHHHhcccchhccceeccceeeeeeechh------------------hcC----CCcceEEecc
Confidence 133456677889999999999999999999999999999853 333 3899999999
Q ss_pred EEEEEC
Q 009410 483 RVVWEN 488 (535)
Q Consensus 483 r~V~~~ 488 (535)
-+.+..
T Consensus 453 ~ia~a~ 458 (568)
T COG0804 453 MIAWAQ 458 (568)
T ss_pred eeeeec
Confidence 998874
No 105
>PLN02599 dihydroorotase
Probab=99.90 E-value=1.3e-21 Score=193.08 Aligned_cols=291 Identities=16% Similarity=0.147 Sum_probs=207.1
Q ss_pred EEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-c--cccccceeeee
Q 009410 102 FVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-N--SCMDYGFHMAI 177 (535)
Q Consensus 102 ~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~ 177 (535)
+.+|---|+|+|+.++ ++.....-+.+.|||++++|.+..+. ...+.++...+... . ..+++.+++..
T Consensus 23 ~~~~~~~d~h~hlr~~--------~~~~~~~~~~~gg~t~~i~MPn~~Ppv~~~~~~~~~~~~~~~~~~~~vdf~~~~~l 94 (364)
T PLN02599 23 LTITRPDDWHLHLRDG--------AKLAAVVPHSARHFGRAIVMPNLKPPVTTTARALAYRERIMKALPPGSSFEPLMTL 94 (364)
T ss_pred EEecCCcceeeEccCc--------HHHHhhhHHhcCCcCEEEECCCCCCCcCCHHHHHHHHHHHhhhcCCCcceEEEEEE
Confidence 5699999999999876 23333444678999999999654322 44555555544443 3 34688888766
Q ss_pred ecCChhhHHHHHHHHHHcCCC-EEEEEeecCC---CCcC-CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcC
Q 009410 178 TKWDEVVSDEMEVMVKEKGIN-SFKFFMAYKG---SFMI-NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (535)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~-~ik~~~~~~~---~~~~-~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g 252 (535)
........+++..+. +.|+. ++|+|+...+ .... +.+.+..+++.+++.|+++.+|++.........
T Consensus 95 ~lt~~~~l~Ei~~~~-~~Gvv~gfKlyp~~~tt~s~~gv~d~~~l~~~le~~~e~G~~L~vH~E~~~~~~~~~------- 166 (364)
T PLN02599 95 YLTDNTTPEEIKAAK-ASGVVFAVKLYPAGATTNSQAGVTDLGKCLPVLEEMAEQGMPLLVHGEVTDPSVDIF------- 166 (364)
T ss_pred ecCCCCCHHHHHHHH-HCCCcEEEEECcccCcCCCccccCCHHHHHHHHHHHHhcCCEEEEecCCCccccccc-------
Confidence 333223457777775 78988 9999875322 1122 358999999999999999999998754210000
Q ss_pred CCCcccccccCChhhHHHHHHHHH--HHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcC
Q 009410 253 ITGPEGHALSRPPLLEGEATTRAI--RLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (535)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (535)
..+...+.+.+ .+++..+.++|+.|.++.+.++.++.++ .+ +|++++++||++++.+++....
T Consensus 167 -------------~~E~~~i~r~l~~~la~~~g~kI~i~HiSt~~~ve~v~~ak-~~-~vtae~tpHhL~l~~~~~~~~~ 231 (364)
T PLN02599 167 -------------DREKVFIDTILAPLVQKLPQLKIVMEHITTMDAVEFVESCG-DG-NVAATVTPQHLLLNRNALFQGG 231 (364)
T ss_pred -------------ccHHHHHHHHHHHHHHhccCCeEEEEecChHHHHHHHHhcc-CC-CEEEEecHHHHhcCHHHHhccC
Confidence 00122355666 4777889999999999999888887666 34 8999999999999988764322
Q ss_pred ccccceeEEcCCCCCcccHHHHHHHHhcCCe-EEEeCCCCCCChhhhhcCCCCcccCcchHHH---HHHHHHHHHHhcCC
Q 009410 331 FVTAAKYVMSPPIRASGHNKALQAALATGIL-QLVGTDHCAFNSTQKAFGIDDFRKIPNGIEE---RMHLVWDTMVESGQ 406 (535)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~-~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~---~l~~~~~~~~~~~~ 406 (535)
.+..++++||+|...+++++|+++.+|.. +.+||||+|+....+.. ++. ++ |++. .++++. ....+.+
T Consensus 232 --~~~~~k~~PPlR~~~dr~aL~~al~~G~i~~~i~SDHaPh~~~~K~~---~~g-~~-Gi~~~~~~l~~l~-~~~~~~g 303 (364)
T PLN02599 232 --LQPHNYCLPVLKREIHREALVKAATSGSKKFFLGTDSAPHPKRAKEA---SCG-CA-GIYSAPVALSLYA-KAFEEAG 303 (364)
T ss_pred --CCCCeEEECCCCCHHHHHHHHHHHHcCCCCEEEecCCCCCChHHhcC---CCC-CC-CcccHHHHHHHHH-HHHHhcC
Confidence 23568999999999999999999999995 89999999998777642 221 11 3333 456544 3333445
Q ss_pred CCHHHHHHHHhHHHHHHcCCCCCCcc
Q 009410 407 ISVTDYVRLTSTECARIFNVYPRKGA 432 (535)
Q Consensus 407 ls~~eal~~~T~~~A~~lgl~~~~Gs 432 (535)
+++++.+..+.|||++||+..++|+
T Consensus 304 -~l~~l~~~~S~npA~~~gL~~~kg~ 328 (364)
T PLN02599 304 -ALDKLEAFTSFNGPDFYGLPRNTST 328 (364)
T ss_pred -CHHHHHHHHhHHHHHHhCCCCCCCe
Confidence 9999999999999999999446666
No 106
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.89 E-value=8.5e-21 Score=179.89 Aligned_cols=99 Identities=20% Similarity=0.266 Sum_probs=77.3
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEee---EEEEEEECC
Q 009410 406 QISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKG---KVEVTIAGG 482 (535)
Q Consensus 406 ~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~---~v~~v~~~G 482 (535)
-||++.+++-.|..+|+.+|+ .+.|.|++|.+|||+|+|+......... .-...|+.|+.... .+..|.+.|
T Consensus 473 ~l~Le~av~rmT~~~Ae~~GL-~drGlvreG~rADl~viDp~~vr~~a~y----~~~~lPa~G~~~~~vn~~~vat~v~G 547 (579)
T COG3653 473 LLSLERAVRRMTGELAEWFGL-GDRGLVREGDRADLVVIDPHLVRDVATY----TEPALPAYGILRVMVNRNVVATGVGG 547 (579)
T ss_pred cccHHHHHHHHhccHHHHhCc-ccccccccccccceEEEccccccccccc----cCccCCCCcceEEEEeccceeeecce
Confidence 489999999999999999999 5789999999999999998655444321 11235776653322 355667779
Q ss_pred EEEEECCeecccCCCceEeecCCCccc
Q 009410 483 RVVWENDELNVVPGSGKYIEMRPFNYL 509 (535)
Q Consensus 483 r~V~~~~~~~~~~~~~~~~~~~~~~~~ 509 (535)
.+++++|++++....|+++|.-.+++.
T Consensus 548 vvs~rdGe~tg~~~aGR~lR~g~~g~~ 574 (579)
T COG3653 548 VVSFRDGEFTGQVKAGRYLRAGELGAA 574 (579)
T ss_pred eEEEecCcccCcccccchhcccccccc
Confidence 999999999997668999998777763
No 107
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.87 E-value=5e-20 Score=178.82 Aligned_cols=274 Identities=20% Similarity=0.215 Sum_probs=171.2
Q ss_pred eecccccccccccc-cC---CCCc--hhhhHHHHHHHHhCCcEEEeccccCCCC--------ChHHHHHHHHHHh--ccc
Q 009410 104 MPGGIDPHTHLAME-FM---GSET--IDDFFSGQAAALAGGTTMHIDFVIPING--------SLTAGFEAYEKKA--KNS 167 (535)
Q Consensus 104 lPGlID~H~H~~~~-~~---g~~~--~~~~~~~~~~~l~~GvTtv~d~~~~~~~--------~~~~~~~~~~~~~--~~~ 167 (535)
+|||||.|+--... +. |-.. ...+...-..++++||||++|....+.. .....++...... +..
T Consensus 1 lPG~vdlH~D~~E~~~~PRp~v~~~~~~a~~~~d~~~~a~GiTT~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (325)
T cd01306 1 LPGLIDLHTDNLEKHVMPRPGVDWPMDIALAAHDRQLAAAGITTVFDALSFGDEEGGRRRLRNLRKLIDAIRELHARGVL 80 (325)
T ss_pred CCCeEEecCcchhcccCCCCCCCCCHHHHHHHHHHHHHhcCcccceeeeEeccccCCcccHHHHHHHHHHHHHhhhCCcc
Confidence 69999999854433 11 1111 1223344456789999999986432211 2223333333332 334
Q ss_pred ccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCC-----------------------------------CcC
Q 009410 168 CMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS-----------------------------------FMI 212 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~-----------------------------------~~~ 212 (535)
..+..++........+..+.+..+.....++.+.+.=.-+|. ...
T Consensus 81 ~~d~~~hlR~E~~~~~~~~~~~~~~~~~~v~lvs~~dH~pg~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (325)
T cd01306 81 RADHRLHLRCELADPAVLPELESLMADPRVHLVSLMDHTPGQRQFRDLEKYREYYAKKYGLSDEEVEEAILERKARAAAY 160 (325)
T ss_pred hhhcceEEEEeecCccHHHHHHHHhcCCCcCEEEEeCCCCccccccCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhc
Confidence 455666666665666677777777755566666553211111 134
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
+.+.++++++.|+++|+++.+|..... +..+...+.|.. . ..|..
T Consensus 161 ~~~~~~~iv~~A~~~gl~vasH~d~~~---~~v~~a~~~Gv~-------------------------------~-~E~p~ 205 (325)
T cd01306 161 APANRSELAALARARGIPLASHDDDTP---EHVAEAHELGVV-------------------------------I-SEFPT 205 (325)
T ss_pred CHHHHHHHHHHHHHCCCcEEEecCCCh---HHHHHHHHCCCe-------------------------------e-ccCCC
Confidence 568889999999999999999985432 122222223332 1 33443
Q ss_pred CHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCC
Q 009410 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (535)
Q Consensus 293 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~ 372 (535)
+ .+.+..+++.|+.++++.. .. .+.+. .....+++++++.|+.++++||+.+..
T Consensus 206 t---~e~a~~a~~~G~~vv~gap-n~------------lrg~s----------~~g~~~~~~ll~~Gv~~al~SD~~p~s 259 (325)
T cd01306 206 T---LEAAKAARELGLQTLMGAP-NV------------VRGGS----------HSGNVSARELAAHGLLDILSSDYVPAS 259 (325)
T ss_pred C---HHHHHHHHHCCCEEEecCc-cc------------ccCcc----------ccccHhHHHHHHCCCeEEEEcCCCcHh
Confidence 3 2667788889998886531 10 00000 011245889999999999999986531
Q ss_pred hhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceee
Q 009410 373 STQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEI 452 (535)
Q Consensus 373 ~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i 452 (535)
. +...+ .+....++++.++|+++|.|||+++|++ +.|+|++||.||||+++.+..
T Consensus 260 l--------------------l~~~~-~la~~~gl~l~eAl~~aT~nPA~~lGl~-d~G~I~~G~~ADlvvvd~~~~--- 314 (325)
T cd01306 260 L--------------------LHAAF-RLADLGGWSLPEAVALVSANPARAVGLT-DRGSIAPGKRADLILVDDMDG--- 314 (325)
T ss_pred H--------------------HHHHH-HHHHHcCCCHHHHHHHHhHHHHHHcCCC-CCCCcCCCCCCCEEEEeCCCC---
Confidence 1 11222 3344567999999999999999999996 579999999999999997521
Q ss_pred ecCCccccCCCCCCCCeeEeeEEEEEEECC
Q 009410 453 TARSHHSRLDTNVYEGRRVKGKVEVTIAGG 482 (535)
Q Consensus 453 ~~~~~~~~~~~~p~~~~~~~~~v~~v~~~G 482 (535)
...|..||++|
T Consensus 315 -------------------~p~v~~v~~~G 325 (325)
T cd01306 315 -------------------VPVVRTVWRGG 325 (325)
T ss_pred -------------------CCccceEEeCc
Confidence 13688899887
No 108
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.87 E-value=1e-20 Score=185.91 Aligned_cols=299 Identities=23% Similarity=0.252 Sum_probs=160.3
Q ss_pred ecCCCEEeecccccccc--cccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhccccccccee
Q 009410 97 DATGKFVMPGGIDPHTH--LAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFH 174 (535)
Q Consensus 97 D~~G~~vlPGlID~H~H--~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (535)
|++|++|+|||||+|+| ......+....+........++.+|||+++++.... .......... .....
T Consensus 1 D~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~tt~~~~~~~~---~~~~~~~~~~-------~~~~~ 70 (304)
T PF13147_consen 1 DASGKYVLPGLIDLHVHGPLGRSEDGAPWAEQAAAASAAALAGGVTTVVDMPGTN---PEELNRARRR-------GAGYP 70 (304)
T ss_dssp E-TTSEEEE-EEEEEEECCSSCETTTEEHSSHHHHHHHHHHHTTEEEEEESSSSS---HHHHHHHHHH-------ESEEE
T ss_pred CCCCCEEccceeeeeeCCCcCCCCCCccchhhHHHHHHHHHhCCEeEEecCCCCC---chhhHHHHhh-------ccccc
Confidence 89999999999999999 333322333334445667788999999999853221 2222222222 11111
Q ss_pred eeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcC-CeEEEEcCChhhHHHHHHHHHHcCC
Q 009410 175 MAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLG-ALAMVHAENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g-~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (535)
................+.........++...+ .......+.+.++.+...+ +.+..|+... ........-.+...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 146 (304)
T PF13147_consen 71 GSGAGPRGTTIEELEALVDLIAAEGVGFVAAY---NGIEGPGLQAAIRAAHRAGVIKVVGHSPAD-GIEGAIAEGLDAME 146 (304)
T ss_dssp EECESCCHHHHHHHHHHHHHHHHTEEEEESSS---THHHHHHHHHHHHHHHHHTHEEEEEECHHH-HHHHHHHHHHHTTH
T ss_pred cccccccccchHHHHHHHHHHhhcCcceeecc---ccCCHHHHHHHHHHHHhcCCeeeecccchh-hHHHHHHhcccchh
Confidence 11111222233333333323333444443221 1346778888888999999 5555555433 11111111111000
Q ss_pred CCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccc
Q 009410 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVT 333 (535)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 333 (535)
. ....................+..+....................++....+.. +..... ..
T Consensus 147 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~ 208 (304)
T PF13147_consen 147 H--------ILPHEVAEALHLAEALAQGAGPGLHCHVASDDATAEGVAIAHGFGLPPTPLHL-----LARDAA-----AA 208 (304)
T ss_dssp H--------STHHHHHHHHHHHHHHHHHHTHCEEEEETSSHHHHHHHHHHHHTTHEEEEEEH-----HHHHHH-----HH
T ss_pred h--------hhhhhHHHHHHHHHHhhhccccchhhhhhhhhhhhHHHHHHHhhccccchHHh-----hHHHHH-----hc
Confidence 0 01111112222222333333555555444444432224444545555443320 000000 00
Q ss_pred cceeEEcCCCC--CcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHH
Q 009410 334 AAKYVMSPPIR--ASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTD 411 (535)
Q Consensus 334 ~~~~~~~p~~r--~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~e 411 (535)
...+...|+.+ .......++.++++|++++++||+.+...... ...+.... .+....|+++++
T Consensus 209 ~~~~~~~p~~~~~~~~~~~~~~~l~~~Gv~~~l~sD~~~~~~~~~--------------~~~~~~~~-~~~~~~gl~~~~ 273 (304)
T PF13147_consen 209 GIRFKVLPPLRLDLREDRAALRELLEAGVPVALGSDHAPSSTEGS--------------GDLLHEAM-RLAVRAGLSPEE 273 (304)
T ss_dssp GGGGEESSCHHHHTHHHHHHHHHHHHTTSSEEEEE-BBTTTTTCT--------------TTHHHHHH-HHHHHTSSTHHH
T ss_pred CceeeeCCCccccchhhhHHHHHHHhCCCeEEEEcCCcccccccc--------------cccchhhh-hHHhhcCCCHHH
Confidence 24556677766 67778889999999999999999876532100 01122222 222347899999
Q ss_pred HHHHHhHHHHHHcCCCCCCccccCCCCccEE
Q 009410 412 YVRLTSTECARIFNVYPRKGAILVGSDADII 442 (535)
Q Consensus 412 al~~~T~~~A~~lgl~~~~GsI~~Gk~ADlv 442 (535)
|++++|.|||++||+++++|+|++||+||||
T Consensus 274 al~~~T~~pA~~lgl~~~~G~i~~G~~ADlv 304 (304)
T PF13147_consen 274 ALRAATSNPARILGLDDDKGSIAPGKDADLV 304 (304)
T ss_dssp HHHHHTHHHHHHTTBTTTSSSTSTTSB-EEE
T ss_pred HHHHHHHHHHHHhCCCCCCccCCCCCCCCcC
Confidence 9999999999999998899999999999997
No 109
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.84 E-value=7.5e-20 Score=182.89 Aligned_cols=289 Identities=20% Similarity=0.225 Sum_probs=157.6
Q ss_pred EEeecccccccccccccCCCC-------chhhhHHHHHHHHhCCcEEEeccccCCCCCh---HHHHHHHHHHhccccc--
Q 009410 102 FVMPGGIDPHTHLAMEFMGSE-------TIDDFFSGQAAALAGGTTMHIDFVIPINGSL---TAGFEAYEKKAKNSCM-- 169 (535)
Q Consensus 102 ~vlPGlID~H~H~~~~~~g~~-------~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~---~~~~~~~~~~~~~~~~-- 169 (535)
+|+|||||+|+|+..+ ... ..+.+......++++||||++|+........ ................
T Consensus 1 ~v~PGlID~H~H~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (333)
T PF01979_consen 1 YVMPGLIDAHVHGGQG--GLRGLLDPEDHYESIRTGAKAALKGGVTTVLDTPHTSPNPDIELRNEIMEGLAAAPKIEPAM 78 (333)
T ss_dssp EEEE-EEEEEEEGGGT--THTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEEESSHCHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred CEEcChhHHhhCcCCc--CccccCCHHHHHHHHHHHHHHHHhcCeEEEEcCcccCCccccccccccccccccchhhhccc
Confidence 6999999999999987 333 3444566778889999999999854333311 1112222222221111
Q ss_pred ------ccceeeeeecCChhh---------HHHHHHHHHHcCCC-----EEEEEeecCCCCcCCHHHHHHHHHHHHh---
Q 009410 170 ------DYGFHMAITKWDEVV---------SDEMEVMVKEKGIN-----SFKFFMAYKGSFMINDELLIEGFKRCKS--- 226 (535)
Q Consensus 170 ------~~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~-----~ik~~~~~~~~~~~~~~~l~~~~~~a~~--- 226 (535)
..+.+........+. ..++.+.....+.. .+...........++.+.+...++.+++
T Consensus 79 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 158 (333)
T PF01979_consen 79 TLLGTGSVGGHGEGPNEPPDKNGPHDEAFEGEDFIKFIEEAGSEIKRIDGVIPAISPHNPYTVSDEELREAVELAKEFLA 158 (333)
T ss_dssp EEEEECECSEEEECHHHHHHHHSEHHHHHHHHHHHHHHHHHTTTCEEEECEEEEEEHHTTTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccCCchhhhHHHHHHHhhhhhhhhcccccccccccccccccchhhhhhhHHhhhhhHHH
Confidence 111111111100000 01122222232222 3334444556677889999999999998
Q ss_pred --c-CCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHH----HHHhcCCCEEEEEccCHHHHHH
Q 009410 227 --L-GALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR----LAEFVNTPLYVVHVMSMDAMEE 299 (535)
Q Consensus 227 --~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~H~~~~~~~~~ 299 (535)
. +.++.+|+.+............ + ...+..... .....+....+.|+..... +.
T Consensus 159 ~~~~~~~~~~h~~~~~~~~~~~~~~~--~----------------~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~-~~ 219 (333)
T PF01979_consen 159 AEKLGIPVHIHVAEGTGEVEAMTHLY--G----------------MSPIEALDHLGLLEEAIDDGVDLIAHGTHLSD-EE 219 (333)
T ss_dssp HHHHTHEEEEEESSSHHHHCCCHHHH--S----------------HHHHHHHHHHHSCHHHHHHHCEEEEEHTTSEH-HH
T ss_pred HHhhcccceeeeccCcccceeEeeee--e----------------ccchhhhccchhhhhhcccccceeeccccCCH-HH
Confidence 4 9999999966543311111100 0 000111100 0111133456789988775 78
Q ss_pred HHHHHHcCCcEEeccccceEeeC-cccccCcCccccceeEEcCCCCCcccHHHHHHHHhc-CCeEEEeCCCCCCChhhhh
Q 009410 300 IAKARKAGQRVIGEPVVSGLVLD-DSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT-GILQLVGTDHCAFNSTQKA 377 (535)
Q Consensus 300 ~~~~~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~-Gv~~~lgtD~~~~~~~~~~ 377 (535)
++++++.+..+..|+........ ..... .+.. . .............+..++.+ |+. +|||+.. .
T Consensus 220 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~---~~~~~~l~~~~~~~~~~~~~~g~~--lgtDg~~---~--- 285 (333)
T PF01979_consen 220 IELLKETGIGIIHCPISNDSAPHKPGKAI--MMDG-T---AEGIYGLGSGGAPLFRMLDKMGVN--LGTDGVA---E--- 285 (333)
T ss_dssp HHHHHHHTHEEEEEHHHHHHHHHHTTHHS--ETTB-S---BTSBSCTTHHHHHHHHHHHCTTHE--ETTCTTC---H---
T ss_pred hhhhhccCCccccccchhhhhcccccccc--ccch-h---ccccccccccccchhhhhhhcccc--ccccccc---c---
Confidence 88888889888888765332000 00000 0000 0 00000011122345566666 887 9999433 1
Q ss_pred cCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEc
Q 009410 378 FGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 445 (535)
Q Consensus 378 ~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld 445 (535)
.+..+. +. +++++++|+++|.|||++||+++++|+|++||+|||||+|
T Consensus 286 ---------------~l~~~~----~~-~~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~ADlvv~D 333 (333)
T PF01979_consen 286 ---------------ELKLFV----RL-GISPEEALKMATINPAKILGLDDDKGSIEPGKDADLVVLD 333 (333)
T ss_dssp ---------------HHHHHH----HH-HSHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB--EEEEE
T ss_pred ---------------cccccc----cc-cccccccccccchhHHHHcCCCCCEEEeCcCCCcCEEEeC
Confidence 222222 12 2999999999999999999999999999999999999997
No 110
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=99.78 E-value=2.5e-17 Score=155.46 Aligned_cols=408 Identities=23% Similarity=0.250 Sum_probs=206.1
Q ss_pred CcccEEEEccEEEcCCCc---eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccc---cCCCCch
Q 009410 51 SSSKILIKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME---FMGSETI 124 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~~---~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~---~~g~~~~ 124 (535)
|+..++|+|+-|+|+-.. +.-+|.|+||+|++=..-. ...+++||++|+++|||=+|+|+|+..+ ......+
T Consensus 1 m~~e~~IKNg~V~dPlngingE~MDI~vkdGKIVe~sev~--~~~aKVIDA~gklvm~GGvD~HsHvAG~KvNvGR~~rP 78 (575)
T COG1229 1 MAMEILIKNGIVYDPLNGINGEKMDICVKDGKIVEESEVS--ESKAKVIDASGKLVMPGGVDSHSHVAGAKVNVGRIMRP 78 (575)
T ss_pred CCceEEeecCEEecCccCCCCceeeEEeecCeEeeecccc--cccceEEeccCcEEecCccccccccccccccccceeCh
Confidence 356799999999997753 6789999999998654321 1248999999999999999999999875 1111122
Q ss_pred hhhHH----------------------HHHHHHhCCcEEEeccccCCCCChHHHHHHHHHH---hcccccccc-eee---
Q 009410 125 DDFFS----------------------GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK---AKNSCMDYG-FHM--- 175 (535)
Q Consensus 125 ~~~~~----------------------~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~--- 175 (535)
++.+. ..-.+.+-|.||+++...|+-. .+..-+.+... ....+.-++ .+.
T Consensus 79 ed~rk~~~~~~gk~rag~G~svpst~~~GY~YA~mGYTtv~EaA~Ppl~-arHtHEE~~~tPilD~~a~~lfgnNw~vme 157 (575)
T COG1229 79 EDSRKVVLKKTGKTRAGSGYSVPSTYKTGYRYAKMGYTTVIEAAIPPLL-ARHTHEEFRATPILDKAAYPLFGNNWFVME 157 (575)
T ss_pred hhhhhhhhhhcccccccccccccccchhhhhhhhccceeEeeccCCccc-cccchhhhhcccccccccccccccchhhhh
Confidence 22211 1123466799999988665543 22222222211 111111111 011
Q ss_pred eeecCCh-hhHHHHHHHHHHcCCCEEEEEeecCCC------------------CcCC-HHHHHHHHHHHHhcCCeEEEEc
Q 009410 176 AITKWDE-VVSDEMEVMVKEKGINSFKFFMAYKGS------------------FMIN-DELLIEGFKRCKSLGALAMVHA 235 (535)
Q Consensus 176 ~~~~~~~-~~~~~~~~~~~~~g~~~ik~~~~~~~~------------------~~~~-~~~l~~~~~~a~~~g~~v~~H~ 235 (535)
-+...+- .....+..+++...--++|+. ++.|. ..++ .+.++.+.+...+++++..+|.
T Consensus 158 Yi~egd~ek~aAyvAW~lkatkgygiKiV-NPgG~eaWgwG~NV~sLddpvp~FdiTP~EIi~glaevnE~L~lphsIHl 236 (575)
T COG1229 158 YIREGDMEKAAAYVAWLLKATKGYGIKIV-NPGGVEAWGWGKNVHSLDDPVPYFDITPREIIKGLAEVNERLGLPHSIHL 236 (575)
T ss_pred hhhcCCHHHHHHHHHHHHHhcccceEEEE-CCCCcccccccCCcccccCCCCCcccCHHHHHHHHHHHHHhhCCCcceEe
Confidence 1111111 222333344433334455553 22110 1233 5667777777788899866654
Q ss_pred --CChhhH---HHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccC----HH-------HHHH
Q 009410 236 --ENGDAV---FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS----MD-------AMEE 299 (535)
Q Consensus 236 --~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~----~~-------~~~~ 299 (535)
++.... ...++.+ .+. .+ ...+|.. .+...-++.+|+.. .+ ..+.
T Consensus 237 H~N~LG~PGnyetT~es~---k~~--~~-v~~~p~~-------------~~r~q~l~~tHvqFnsygGtsWrdfeS~a~~ 297 (575)
T COG1229 237 HCNNLGHPGNYETTLESM---KLP--DG-VKPRPED-------------GERDQVLYVTHVQFNSYGGTSWRDFESGAEE 297 (575)
T ss_pred ccccCCCCCceeeehhhh---ccc--cC-cccCCCC-------------CcccceeEeeeEEeeccCCCchhhhhhccHH
Confidence 332111 1111110 000 00 0001101 11122245555521 11 1133
Q ss_pred HHHHHHcCCcEEeccccc----eEeeCc---------------ccccCcCccccce---eEEcCCCCCcccHHH----HH
Q 009410 300 IAKARKAGQRVIGEPVVS----GLVLDD---------------SWLWHSDFVTAAK---YVMSPPIRASGHNKA----LQ 353 (535)
Q Consensus 300 ~~~~~~~g~~v~~~~~~~----~~~~~~---------------~~~~~~~~~~~~~---~~~~p~~r~~~~~~~----~~ 353 (535)
+.......-.|+.....- ...+.. ....+.++..|++ +..+|..-...-+-+ +.
T Consensus 298 iA~yvN~~dhv~iD~Gqv~fgeattMTaDgP~e~~l~~ltg~kWsN~DvElE~gsGVVPf~YspknpV~avQWAiGLEl~ 377 (575)
T COG1229 298 IADYVNKNDHVVIDLGQVTFGEATTMTADGPMEYDLHKLTGLKWSNCDVELETGSGVVPFIYSPKNPVHAVQWAIGLELA 377 (575)
T ss_pred HHHhhccCCcEEEecCCcccccceeeccCCchhhhHHHhhcccccCCceeeecCCceEeeeecCCCchhHhHHHhhheee
Confidence 333333333333322110 001110 0011111222221 112222111111112 12
Q ss_pred HHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHH--------HHHHH----h----cCCCCHHHHHHHHh
Q 009410 354 AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLV--------WDTMV----E----SGQISVTDYVRLTS 417 (535)
Q Consensus 354 ~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~--------~~~~~----~----~~~ls~~eal~~~T 417 (535)
.+.++-.++++.||++.. +||...|.-+..-|..- +++++ . ...+++.|+..+--
T Consensus 378 Lli~dp~kv~lTTD~PNg---------GpFt~YP~v~awlMS~k~R~~~i~~~hkwa~~rs~l~~idrE~t~~eia~~TR 448 (575)
T COG1229 378 LLINDPWKVVLTTDSPNG---------GPFTRYPEVMAWLMSEKYREEWIEGVHKWAQDRSALAGIDRELTLYELAIMTR 448 (575)
T ss_pred eeecCCCeEEEeccCCCC---------CCccccHHHHHHHHhHHHHHHHHhhhhHhhhhhcccccccccccHHHHHHHHh
Confidence 244456789999996532 46776665111111110 11111 1 22378889988888
Q ss_pred HHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCC
Q 009410 418 TECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGS 497 (535)
Q Consensus 418 ~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~ 497 (535)
.+||+.+|+.+++|.|-+|.+||+.|+|.||..--+..+... ...+ .++..+|+++|++|.++|+++..+ .
T Consensus 449 a~~ak~lgl~e~kGhLg~GadadIaiYdlnP~~vDps~dye~-----v~ka---f~~A~ytlK~GeIvvkdGeiv~~p-~ 519 (575)
T COG1229 449 ANPAKVLGLSERKGHLGVGADADIAIYDLNPEQVDPSNDYEK-----VEKA---FRKAAYTLKGGEIVVKDGEIVAEP-E 519 (575)
T ss_pred cChhhhcccccccCccCcCccCceEEEecChhhcCCcccHHH-----HHHH---HhheeEEecCceEEEecceEEecc-c
Confidence 999999999989999999999999999977553222111111 1111 246789999999999999999865 3
Q ss_pred ce
Q 009410 498 GK 499 (535)
Q Consensus 498 ~~ 499 (535)
|+
T Consensus 520 gr 521 (575)
T COG1229 520 GR 521 (575)
T ss_pred Cc
Confidence 43
No 111
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=99.78 E-value=5.4e-18 Score=174.08 Aligned_cols=250 Identities=19% Similarity=0.158 Sum_probs=141.9
Q ss_pred HHHhCCcEEEeccccCCCCChHHHHHHHHHHhccc--ccccceee---ee---ecCChhhHHHHHH---HHHHcCCCEEE
Q 009410 133 AALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNS--CMDYGFHM---AI---TKWDEVVSDEMEV---MVKEKGINSFK 201 (535)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~---~~~~~~~~~~~~~---~~~~~g~~~ik 201 (535)
.+.+.||||+.|+.. ........++.+.+..... .+++..+. ++ .+...+....+.. +....|..
T Consensus 138 ~~~a~GiTt~~d~~~-~~~~~~~~~~~~~~l~~~~~l~~rv~~~~~~~~vk~~~dg~~~~~~a~~~~~~~~~~~g~~--- 213 (404)
T PF07969_consen 138 AAGAYGITTVLDYGG-GFASDPEDLEALRELAAEGGLPLRVHLYPRIGGVKIFADGSPGGRTALLEEPYYADEPGAP--- 213 (404)
T ss_dssp HHCHTCEEEETTCEC-CCGEHHHHHHHHHHHHHCTC--SEEEEEEEEEEEEEESSSSTTHHHHHHHHHHHHHHHTSE---
T ss_pred HhcCCCeEEecCCcc-ccCCCHHHHHHHHHHhhhcCCCeeeeeecccCceeeccccccccchhhhccccccCccccc---
Confidence 345799999999972 1123445555555544332 23332221 11 1121222222222 22223321
Q ss_pred EEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHh
Q 009410 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEF 281 (535)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (535)
....+....+++.+.++++.|.+.|+++.+|+.++..+...++.+.....
T Consensus 214 --~~~~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd~a~~~~l~a~~~~~~---------------------------- 263 (404)
T PF07969_consen 214 --VHISGLPSFDPEELEELVRAAREAGLQVAVHAIGDRAIDEALDAIEAARA---------------------------- 263 (404)
T ss_dssp --EEETC--SSSHHHHHHHHHHHHHCT-EEEEEEESHHHHHHHHHHHHHHTC----------------------------
T ss_pred --ccccccccccchhHHHHHHHHHhcCCeeEEEEcCCchHHhHHHHHHhhcc----------------------------
Confidence 13355566788889999999999999999999888777666655433222
Q ss_pred cCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCe
Q 009410 282 VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGIL 361 (535)
Q Consensus 282 ~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~ 361 (535)
...+.|+..... ++++.+++.|+.+...+ +++..+........... .+ .....+++.++++|++
T Consensus 264 ---~~~i~h~~~~~~-~~~~~~~~l~~~~~~~p--~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~Gv~ 327 (404)
T PF07969_consen 264 ---RGRIEHAELIDP-DDIERMAELGVTASVQP--HFLFSWGGEWYEERLGP---------ER-ARRIYPIRSLLDAGVR 327 (404)
T ss_dssp ---CHEEEEHCBCCH-HHHHHHHHHTTEEEECC--THHHHETEETHHHHHHH---------HC-GGGBTHHHHHHHCTTE
T ss_pred ---cceeeccccCCH-HHHHHHHHhCCccccCh--hHhhhccchhhhhhhhh---------HH-HHHHhHHHHHHhccCc
Confidence 115788888776 88999999998776655 22211110000000000 00 0001458999999999
Q ss_pred EEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHH------hcCCCCHHHHHHHHhHHHHHHcCCCCCCccccC
Q 009410 362 QLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMV------ESGQISVTDYVRLTSTECARIFNVYPRKGAILV 435 (535)
Q Consensus 362 ~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~------~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~ 435 (535)
+++|||+.....+ ||. ++............ ..+.+|++|||+++|.|||+.+|+++++|+|++
T Consensus 328 v~~gsD~p~~~~~-------P~~----~~~~~~~~~~~~~~~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~~Gsl~~ 396 (404)
T PF07969_consen 328 VALGSDAPVSPPN-------PFR----GIWAAVTRQMAGERSGPVLGPEQRLSLEEALRAYTSNPARALGLEDRKGSLEP 396 (404)
T ss_dssp EEE--TTTTSSCC-------HHH----HHHHHHHHHHCHHTHHHCCGGTGSSHHHHHHHHTTHHHHHHTT-TTTSSSSST
T ss_pred eecCcCCcccccC-------cch----hhhhhhccccccccccccccccccCCHHHHHHHHhHHHHHHcCCCCCcceECC
Confidence 9999996532111 222 22222211111100 126799999999999999999999988899999
Q ss_pred CCCccEEE
Q 009410 436 GSDADIII 443 (535)
Q Consensus 436 Gk~ADlvv 443 (535)
||.|||||
T Consensus 397 Gk~AD~vV 404 (404)
T PF07969_consen 397 GKLADFVV 404 (404)
T ss_dssp TSBS-EEE
T ss_pred CCCcCeEC
Confidence 99999997
No 112
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.74 E-value=4e-17 Score=146.03 Aligned_cols=72 Identities=19% Similarity=0.391 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeE
Q 009410 392 ERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV 471 (535)
Q Consensus 392 ~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~ 471 (535)
.-|..+++-+.+.-|-|.+-||+++|..||.+||+++.+|+|..|.+||||++|.+
T Consensus 334 ApMd~CvRhf~kATgCs~e~AleaAtlhPAqlLg~ek~KGTLDfG~dADFVllDd~------------------------ 389 (407)
T KOG3892|consen 334 APMDVCVRHFLKATGCSMESALEAATLHPAQLLGLEKSKGTLDFGADADFVLLDDS------------------------ 389 (407)
T ss_pred cCcHHHHHHHHHhcCCcHHHHHhhhccChHHhhccccccccccccccCceEEEccc------------------------
Confidence 35677787788888899999999999999999999999999999999999999943
Q ss_pred eeEEEEEEECCEEEEEC
Q 009410 472 KGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 472 ~~~v~~v~~~Gr~V~~~ 488 (535)
-.|+.+|+.|+.||+.
T Consensus 390 -l~V~aT~isG~~V~~a 405 (407)
T KOG3892|consen 390 -LHVQATYISGELVWQA 405 (407)
T ss_pred -eEEEEEEEccEEEEec
Confidence 3899999999999975
No 113
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=99.70 E-value=2.7e-16 Score=151.22 Aligned_cols=235 Identities=18% Similarity=0.218 Sum_probs=132.8
Q ss_pred EEeecccccccccccccC-C----C-------------------CchhhhHH----HHHHHHhCCcEEEeccccCCCCCh
Q 009410 102 FVMPGGIDPHTHLAMEFM-G----S-------------------ETIDDFFS----GQAAALAGGTTMHIDFVIPINGSL 153 (535)
Q Consensus 102 ~vlPGlID~H~H~~~~~~-g----~-------------------~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~~ 153 (535)
+|+|||||+|+|+++.+. | . .++++++. ...+++++|+||+.|+........
T Consensus 1 ~v~PG~vn~H~H~~~~~~rg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~ 80 (263)
T cd01305 1 ILIPALVNAHTHLGDSAIKEVGDGLPLDDLVAPPDGLKHRLLAQADDRELAEAMRKVLRDMRETGIGAFADFREGGVEGI 80 (263)
T ss_pred CccccceeccccHHHHHhhcCCCCCcHHHHhcCcccchHHHHHhCCHHHHHHHHHHHHHHHHhcCCeEEEEccCcchhHH
Confidence 489999999999987621 1 0 12222222 234568899999999742211123
Q ss_pred HHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEE
Q 009410 154 TAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (535)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (535)
....+...+.+.+. .... ..+. ..+..++ +. ...+.+ ...+....+ ++++++.|+++|+++.+
T Consensus 81 ~a~~~a~~~~g~r~---~~~~-~~~~-~~~~~~~---~~--~~~~~~----~~~~~~~~~---l~~~~~~A~~~g~~v~~ 143 (263)
T cd01305 81 ELLRRALGKLPVPF---EVIL-GRPT-EPDDPEI---LL--EVADGL----GLSSANDVD---LEDILELLRRRGKLFAI 143 (263)
T ss_pred HHHHHHHHhcCCCc---eEEe-ccCC-cchHHHH---HH--hhcccc----cCCCCCccC---HHHHHHHHHHCCCeeEE
Confidence 33333344433332 1111 1111 1111121 11 122222 223333333 99999999999999999
Q ss_pred EcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEec
Q 009410 234 HAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGE 313 (535)
Q Consensus 234 H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~ 313 (535)
|+.+..... |. ..+..+.++ +... +.|+...++ ++++++++.|+.++.|
T Consensus 144 H~~e~~~~~---------g~----------------~~i~~~~~~----~~~~-i~H~~~l~~-~~~~~la~~g~~v~~~ 192 (263)
T cd01305 144 HASETRESV---------GM----------------TDIERALDL----EPDL-LVHGTHLTD-EDLELVRENGVPVVLC 192 (263)
T ss_pred ecCCCCCCC---------Cc----------------hhHHHHHhC----CCCE-EEEcCCCCH-HHHHHHHHcCCcEEEC
Confidence 996542100 00 112222222 3344 689988887 8899999999999999
Q ss_pred cccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHH
Q 009410 314 PVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEER 393 (535)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~ 393 (535)
|..+. ..+... +| +++++++|+++++|||+...+... +|. +++
T Consensus 193 P~sn~-------------~l~~g~---~p---------~~~l~~~Gv~v~lGtD~~~~~~~~------~~~------~~~ 235 (263)
T cd01305 193 PRSNL-------------YFGVGI---PP---------VAELLKLGIKVLLGTDNVMVNEPD------MWA------EME 235 (263)
T ss_pred hhhHH-------------HhCCCC---CC---------HHHHHHCCCcEEEECCCCccCCCC------HHH------HHH
Confidence 86421 111111 22 899999999999999965432111 122 222
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHhHHHHHH
Q 009410 394 MHLVWDTMVESGQISVTDYVRLTSTECARI 423 (535)
Q Consensus 394 l~~~~~~~~~~~~ls~~eal~~~T~~~A~~ 423 (535)
+.....++ ...+++.++|+++|.|+|++
T Consensus 236 ~~~~~~~~--~~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 236 FLAKYSRL--QGYLSPLEILRMATVNAAEF 263 (263)
T ss_pred HHHHHhcc--cccCCHHHHHHHHhhccccC
Confidence 22222111 12469999999999999974
No 114
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=99.60 E-value=2.8e-15 Score=111.41 Aligned_cols=67 Identities=49% Similarity=0.636 Sum_probs=48.1
Q ss_pred EEEeCCEEEEeeCCCCCC-CCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEE
Q 009410 73 VYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMH 142 (535)
Q Consensus 73 I~I~~G~I~~Vg~~~~~~-~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv 142 (535)
|+|+||||++|++....+ .+.++||++|++|+|||||+|+|+... .............++++|||||
T Consensus 1 V~I~~g~I~~v~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~---~~~~~~~~~~~~~~l~~GvTTV 68 (68)
T PF13594_consen 1 VLIEDGKIVAVGPDSELPADAAEVIDAKGKYVMPGFIDMHTHLGEP---GWQSLDPETEAAAALAGGVTTV 68 (68)
T ss_dssp EEEETTEEEEEESSCCTTSTCCEEEEETTCEEEE-EEEEEE-TTTT---CEGGCTCHHHHHHHHHTTEEEE
T ss_pred CEEECCEEEEeCCCCCCCCCCCEEEECCCCEEeCCeEeeeeccccc---cccccchhhHHHHHHCcceeeC
Confidence 789999999997654433 457889999999999999999997632 1111112344566789999997
No 115
>PRK06886 hypothetical protein; Validated
Probab=99.54 E-value=1.5e-12 Score=127.16 Aligned_cols=241 Identities=13% Similarity=0.087 Sum_probs=130.0
Q ss_pred HHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhc-cccccc-ce-eeeeecCChhhHHHHHHHHHHcCCCEEEEE
Q 009410 130 GQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAK-NSCMDY-GF-HMAITKWDEVVSDEMEVMVKEKGINSFKFF 203 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~-~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~ 203 (535)
.++.++++|+|.++.+....+. ...+.+.+..+... ..-+.+ .| ..+.. ..+..+.+.+.. .. ++.+.-.
T Consensus 74 ~l~~~~~~Gtt~iRtHvdvd~~~~l~~~~a~~~~r~~~~~~idlq~vafPq~g~~--~~~~~~l~~~al-~~-advvGGi 149 (329)
T PRK06886 74 AIELMISQGVTAFGTFVDIDPICEDRAIIAAHKAREVYKHDIILKFANQTLKGVI--EPTAKKWFDIGS-EM-VDMIGGL 149 (329)
T ss_pred HHHHHHHcCcccEeeeeccCCCccccHHHHHHHHHHHhcCcceEEEEecChhhcc--CccHHHHHHHHH-Hh-CCEEeCc
Confidence 4455788999999866533222 33344444333332 222222 11 11121 122234444443 23 5555433
Q ss_pred eec-CCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChh-hHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHh
Q 009410 204 MAY-KGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEF 281 (535)
Q Consensus 204 ~~~-~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (535)
... ......+.+.+..+++.|+++|+++++|+.... .....++.+. .+.++. ..
T Consensus 150 P~~~~~~~~~~~e~l~~~~~lA~~~g~~Id~Hlde~~~~~~~~le~l~-----------------------~~~~~~-Gl 205 (329)
T PRK06886 150 PYRDELDYGRGLEAMDILLDTAKSLGKMVHVHVDQFNTPKEKETEQLC-----------------------DKTIEH-GM 205 (329)
T ss_pred cCCcCCCCCCCHHHHHHHHHHHHHcCCCeEEeECCCCchhHHHHHHHH-----------------------HHHHHc-CC
Confidence 111 011245689999999999999999999995432 1122222211 011111 11
Q ss_pred cCCCEEEEEccCHHH------HHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHH
Q 009410 282 VNTPLYVVHVMSMDA------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAA 355 (535)
Q Consensus 282 ~~~~~~~~H~~~~~~------~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~ 355 (535)
..++.+.|+..... .+.++++++.|+.|+++|..+ ++++.... .+..+.+ . .++.++
T Consensus 206 -~grV~~sH~~~L~~~~~~~~~~~i~~La~agi~Vv~~P~sn-l~l~~~~~---~~p~~rG---v---------~pv~eL 268 (329)
T PRK06886 206 -QGRVVAIHGISIGAHSKEYRYRLYQKMREADMMVIACPMAW-IDSNRKED---LMPFHNA---L---------TPADEM 268 (329)
T ss_pred -CCCEEEEEeccccCcChhhHHHHHHHHHHcCCeEEECchhh-hhhccccc---cCcCCCC---C---------CCHHHH
Confidence 34788999977553 236899999999999999863 21111000 0001111 1 238999
Q ss_pred HhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 356 LATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 356 l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
+++|+++++|||+...++. ||.+. .+...+.... .. ..-.+..++|+++|.|+|+++|++
T Consensus 269 ~~aGV~V~lGtDnv~D~~~-------p~g~~--Dmle~~~l~~-~~--~~~~~~~~~l~maT~~gAraLgl~ 328 (329)
T PRK06886 269 IPEGITVALGTDNICDYMV-------PLCEG--DMWQELSLLA-AG--CRFYDLDEMVNIASINGRKVLGLE 328 (329)
T ss_pred HHCCCeEEEecCCCcccCC-------CCCCC--CHHHHHHHHH-HH--cCCCCHHHHHHHHhhhHHHHhCCC
Confidence 9999999999997542111 11100 1111122211 11 222478999999999999999984
No 116
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.53 E-value=3.6e-13 Score=130.28 Aligned_cols=249 Identities=21% Similarity=0.223 Sum_probs=140.7
Q ss_pred ccccccccccccCCC------------Cc----hhhhHHHHHHHHhCCcEEEeccccCCCC-----ChHHHHHHHHHH-h
Q 009410 107 GIDPHTHLAMEFMGS------------ET----IDDFFSGQAAALAGGTTMHIDFVIPING-----SLTAGFEAYEKK-A 164 (535)
Q Consensus 107 lID~H~H~~~~~~g~------------~~----~~~~~~~~~~~l~~GvTtv~d~~~~~~~-----~~~~~~~~~~~~-~ 164 (535)
|||+|+|+....... .+ ..........++++||||+.++...... ......+...+. +
T Consensus 1 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (275)
T cd01292 1 FIDTHVHLDGSALRGTRLNLELKEAEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAVAEAARASAG 80 (275)
T ss_pred CcccchhhHHHHHccCCCccccccccccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHHHHHHHHhcC
Confidence 799999988762111 01 2223455667899999999998655432 122222222222 1
Q ss_pred cccccccceeeeeecC----ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhh
Q 009410 165 KNSCMDYGFHMAITKW----DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA 240 (535)
Q Consensus 165 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~ 240 (535)
.+.....+.+...... .+...+.+.... ..|+.++++...+.. ...+.+.++++++.|+++++++.+|+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~gi~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~i~~H~~~~~~ 158 (275)
T cd01292 81 IRVVLGLGIPGVPAAVDEDAEALLLELLRRGL-ELGAVGLKLAGPYTA-TGLSDESLRRVLEEARKLGLPVVIHAGELPD 158 (275)
T ss_pred eeeEEeccCCCCccccchhHHHHHHHHHHHHH-hcCCeeEeeCCCCCC-CCCCcHHHHHHHHHHHHcCCeEEEeeCCccc
Confidence 1111111111110000 011223333322 247888877544321 1247899999999999999999999965432
Q ss_pred HHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEe
Q 009410 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLV 320 (535)
Q Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 320 (535)
. ...+.++++.... +.++++.|+...+. +.++.+++.|+.+..|+.....
T Consensus 159 ~---------------------------~~~~~~~~~~~~~-~~~~~~~H~~~~~~-~~~~~~~~~g~~~~~~~~~~~~- 208 (275)
T cd01292 159 P---------------------------TRALEDLVALLRL-GGRVVIGHVSHLDP-ELLELLKEAGVSLEVCPLSNYL- 208 (275)
T ss_pred C---------------------------ccCHHHHHHHHhc-CCCEEEECCccCCH-HHHHHHHHcCCeEEECCccccc-
Confidence 1 0012223333322 66789999988655 7788888889888887754211
Q ss_pred eCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHH
Q 009410 321 LDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDT 400 (535)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 400 (535)
.. +......++..+++.|+++++|||+.+......+ ...+.... .
T Consensus 209 -~~--------------------~~~~~~~~~~~~~~~g~~~~lgTD~~~~~~~~~~-------------~~~~~~~~-~ 253 (275)
T cd01292 209 -LG--------------------RDGEGAEALRRLLELGIRVTLGTDGPPHPLGTDL-------------LALLRLLL-K 253 (275)
T ss_pred -cc--------------------CCcCCcccHHHHHHCCCcEEEecCCCCCCCCCCH-------------HHHHHHHH-H
Confidence 00 0011124488899999999999997654211100 01111111 1
Q ss_pred HHhcCCCCHHHHHHHHhHHHHHH
Q 009410 401 MVESGQISVTDYVRLTSTECARI 423 (535)
Q Consensus 401 ~~~~~~ls~~eal~~~T~~~A~~ 423 (535)
.. ..+++.+++++++|.|||++
T Consensus 254 ~~-~~~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 254 VL-RLGLSLEEALRLATINPARA 275 (275)
T ss_pred HH-hcCCCHHHHHHHHhccccCC
Confidence 11 22389999999999999974
No 117
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=99.10 E-value=2.8e-08 Score=91.67 Aligned_cols=286 Identities=17% Similarity=0.189 Sum_probs=170.7
Q ss_pred EeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC--ChHHHHHHHHHHhccccc--ccceeeeee
Q 009410 103 VMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCM--DYGFHMAIT 178 (535)
Q Consensus 103 vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 178 (535)
-+..-.|+|.|+..+ ++......+.+.++...+-|.+-.+. +..+.++...+.-..... ++-..+..-
T Consensus 6 ~i~rPdDwHlHLRdg--------~mL~~V~p~ts~~f~rAiIMPNL~pPvtt~~~a~aYr~rIl~a~p~~~~F~PLMtlY 77 (344)
T COG0418 6 TIRRPDDWHLHLRDG--------AMLKAVVPYTSRGFGRAIIMPNLVPPVTTVADALAYRERILKAVPAGHRFTPLMTLY 77 (344)
T ss_pred eccCccceeEEecCc--------cHHHHhhhhhhhhcceEEEcCCCCCCcccHHHHHHHHHHHHHhCcCCCCCceeEEEE
Confidence 456678999999876 11111222334477777766554433 444444443333322211 222222222
Q ss_pred cCChhhHHHHHHHHHHcC-CCEEEEEeecCC----CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009410 179 KWDEVVSDEMEVMVKEKG-INSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 179 ~~~~~~~~~~~~~~~~~g-~~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (535)
..+.-..+++.+.. ..| ..++|+|....- .-.-+.+.+..+++..++.|+++.+|-+......+..++
T Consensus 78 Ltd~~~peel~~a~-~~g~i~a~KlYPaGaTTNS~~GV~~~~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdr------ 150 (344)
T COG0418 78 LTDSTTPEELEEAK-AKGVIRAVKLYPAGATTNSDSGVTDIEKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDR------ 150 (344)
T ss_pred ecCCCCHHHHHHHH-hcCcEEEEEeccCCccccCcCCcCcHHHHHHHHHHHHHcCCeEEEecccCCccccchhh------
Confidence 22223456666655 444 788999875421 112247788899999999999999998665332211111
Q ss_pred CCcccccccCChhhHHHHHHHHHH-HHH-hcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCc
Q 009410 254 TGPEGHALSRPPLLEGEATTRAIR-LAE-FVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDF 331 (535)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 331 (535)
|..-+...++ +.+ .-..+++++|+++.+. ++..++.+.++.++.++||+.++.++..--+.
T Consensus 151 --------------E~~Fi~~vl~pl~~~fP~LKIV~EHiTT~da---v~~v~~~~~nlaATIT~hHL~~nrnd~l~Ggi 213 (344)
T COG0418 151 --------------EAAFIESVLEPLRQRFPKLKIVLEHITTKDA---VEYVKDANNNLAATITPHHLLLNRNDMLVGGI 213 (344)
T ss_pred --------------HHHHHHHHHHHHHhhCCcceEEEEEeccHHH---HHHHHhcCcceeeEeehhheeeehhhhhcCCC
Confidence 0111222222 222 3367899999988655 55666777779999999999999876642221
Q ss_pred cccceeEEcCCCCCcccHHHHHHHHhcC-CeEEEeCCCCCCChhhhhcC--CCCcccCcchHHHHHHHHHHHHHhcCCCC
Q 009410 332 VTAAKYVMSPPIRASGHNKALQAALATG-ILQLVGTDHCAFNSTQKAFG--IDDFRKIPNGIEERMHLVWDTMVESGQIS 408 (535)
Q Consensus 332 ~~~~~~~~~p~~r~~~~~~~~~~~l~~G-v~~~lgtD~~~~~~~~~~~~--~~~~~~~~~g~~~~l~~~~~~~~~~~~ls 408 (535)
...+.+.|-.....++.++.++...| .++.+|||++|.....+... +-..++. -..++.+.+.+-+.+.|.
T Consensus 214 --~Ph~fClPilKr~~hr~AL~~aa~sg~~kfFlGtDSAPH~~~~Ke~~cgcAG~fsa----p~al~~~AevFE~~naL~ 287 (344)
T COG0418 214 --RPHLFCLPILKRETHREALREAATSGHPKFFLGTDSAPHARSRKESACGCAGIFSA----PFALPLYAEVFEEENALD 287 (344)
T ss_pred --CcceeeeccccchhhHHHHHHHHhcCCCcEEecCCCCCCccccccccccccccccc----HhHHHHHHHHHHHhcHHH
Confidence 14566888888899999999988876 45999999999887766321 1111222 224445554443444344
Q ss_pred HHHHHHHHhHHHHHHcCCCC
Q 009410 409 VTDYVRLTSTECARIFNVYP 428 (535)
Q Consensus 409 ~~eal~~~T~~~A~~lgl~~ 428 (535)
.-| ..++.|+.+++|+..
T Consensus 288 ~Le--aF~S~nGp~fY~lp~ 305 (344)
T COG0418 288 NLE--AFASDNGPKFYGLPR 305 (344)
T ss_pred HHH--HHHhhcCcceecccC
Confidence 444 357899999999953
No 118
>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]
Probab=99.00 E-value=8.1e-08 Score=85.42 Aligned_cols=286 Identities=14% Similarity=0.053 Sum_probs=167.3
Q ss_pred EeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC--ChHHHHHHHHHHhcccccccceeeeeecC
Q 009410 103 VMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHMAITKW 180 (535)
Q Consensus 103 vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (535)
-+|+.-|+|+|+....+-..- ......+||.-..-|.+-.+. ...+.+....... .......+.+..-..
T Consensus 6 ~i~~~~DmHvHlR~g~ml~aV-------vP~~a~ggvs~AyvMPNL~PPiTt~da~i~YkK~i~-kL~skttfLMslYLs 77 (344)
T KOG2902|consen 6 TITQPDDMHVHLRDGDMLHAV-------VPHSASGGVSRAYVMPNLKPPITTTDAAIIYKKFIM-KLPSKTTFLMSLYLS 77 (344)
T ss_pred ecCCccceeEEeccCCeeeee-------ccccccCceeEEEEcCCCCCCcchHHHHHHHHHHHH-hcCccceeEEEEeec
Confidence 468899999999876111000 111246789988877654433 3444444332222 111112222222222
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCC---cC--CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSF---MI--NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~---~~--~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (535)
.+...+.+++.++..+..++|.|....-.+ .. .-+.+.-++++.++.++++.+|-+-+...+.
T Consensus 78 ~~ttPe~I~eAa~~~~irgVK~YPaGaTTNS~~GV~~~f~~fyPvf~aMqe~nm~LnvHGEvpps~D~------------ 145 (344)
T KOG2902|consen 78 DKTTPEEIREAAESGVIRGVKLYPAGATTNSQDGVTDLFGKFYPVFEAMQEQNMPLNVHGEVPPSIDG------------ 145 (344)
T ss_pred CCCCHHHHHHHHHhCceeeEEeccCcccccccccccccchhhhHHHHHHHHcCceEEecCCCCCccCC------------
Confidence 233456666766556788999886542111 11 2456778889999999999999876532210
Q ss_pred cccccccCChhhHHHHHHHHHHHHHhc-CCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcccc
Q 009410 256 PEGHALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (535)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 334 (535)
.....+..-+..++++...+ ..+++++||.+.++.+.++.+ .+..|..+.++++++++.++.. ..
T Consensus 146 -------~Vf~aE~~Flptll~LhqrfP~LKivlEHcTt~dAv~~ve~a--~~~sVaaTvTahHL~Lt~~dwq-----g~ 211 (344)
T KOG2902|consen 146 -------HVFDAEKIFLPTLLQLHQRFPQLKIVLEHCTTMDAVNFVESA--KEGSVAATVTAHHLLLTRNDWQ-----GQ 211 (344)
T ss_pred -------ceecchhhhHHHHHHHHHhCccceeHHHhcccHHHHHHHHhh--cCCceeeEeehheeEEehhhhc-----CC
Confidence 01111223344555554444 678899999998887777754 4667888899999999876543 22
Q ss_pred ceeEEcCCCCCcccHHHHHHHHhcCC-eEEEeCCCCCCChhhhhcCCCCcccCcc--hHHHHHHHHHHHHHhcCCCCHHH
Q 009410 335 AKYVMSPPIRASGHNKALQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPN--GIEERMHLVWDTMVESGQISVTD 411 (535)
Q Consensus 335 ~~~~~~p~~r~~~~~~~~~~~l~~Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~--g~~~~l~~~~~~~~~~~~ls~~e 411 (535)
....+.|......++.++.++...|- ++.+|||+.|.....+.. +..+-+ .--..++.+.+.+-+++.|+..+
T Consensus 212 P~nfCkPVaK~e~dr~AlvkAatSg~pkFFfGsDSAPHprs~K~~----~~~cAGvysqpfA~sy~A~VFde~gaLd~Lk 287 (344)
T KOG2902|consen 212 PHNFCKPVAKREIDREALVKAATSGSPKFFFGSDSAPHPRSRKES----SCGCAGVYSQPFALSYYAKVFDEAGALDKLK 287 (344)
T ss_pred CcccccccccCcccHHHHHHHHhcCCCceeecCCCCCCccccccc----CCCcceeecccchHHHHHHHHhhhchHHHHh
Confidence 33346777777888888888877765 489999999987776532 111111 11124445554444455443333
Q ss_pred HHHHHhHHHHHHcCCCC
Q 009410 412 YVRLTSTECARIFNVYP 428 (535)
Q Consensus 412 al~~~T~~~A~~lgl~~ 428 (535)
+ .++.++-.++++.+
T Consensus 288 ~--F~s~fG~~FY~~p~ 302 (344)
T KOG2902|consen 288 A--FTSFFGPDFYGLPD 302 (344)
T ss_pred h--hHhhcCcceecccc
Confidence 3 23456666777644
No 119
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=98.99 E-value=9.2e-08 Score=94.91 Aligned_cols=144 Identities=12% Similarity=0.099 Sum_probs=93.7
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEE
Q 009410 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (535)
Q Consensus 211 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 290 (535)
..+.+.+.++++.|+++|+++.+|+............+...| .. .+.|
T Consensus 168 ~~~~~~~~~~~~~A~~~g~~i~~Ha~E~~~~~~~~~~~~~~g-------------------------------~~-ri~H 215 (324)
T TIGR01430 168 GGPPPDFVRAFAIARELGLHLTVHAGELGGPESVREALDDLG-------------------------------AT-RIGH 215 (324)
T ss_pred CCCHHHHHHHHHHHHHCCCCeEEecCCCCChHHHHHHHHHcC-------------------------------ch-hcch
Confidence 445889999999999999999999964321111111111222 21 3567
Q ss_pred ccCH--HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCC
Q 009410 291 VMSM--DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (535)
Q Consensus 291 ~~~~--~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~ 368 (535)
+... +. +.++.+++.|+.+..||.++.....- ..+ ...++++++++|+++++|||+
T Consensus 216 g~~l~~~~-~~i~~l~~~gi~v~~cP~Sn~~l~~~-----------~~~----------~~~pi~~l~~~Gv~v~igTD~ 273 (324)
T TIGR01430 216 GVRALEDP-ELLKRLAQENITLEVCPTSNVALGVV-----------KSL----------AEHPLRRFLEAGVKVTLNSDD 273 (324)
T ss_pred hhhhccCH-HHHHHHHHcCceEEECCccccccccc-----------CCc----------ccChHHHHHHCCCEEEECCCC
Confidence 6665 33 68999999999999999863221100 000 112389999999999999996
Q ss_pred CCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 369 CAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
...... .+...+..++...++++.| |+++|.|+++...+.
T Consensus 274 ~~~~~~------------------~l~~e~~~a~~~~~l~~~e-l~~~~~na~~~~f~~ 313 (324)
T TIGR01430 274 PAYFGS------------------YLTEEYEIAAKHAGLTEEE-LKQLARNALEGSFLS 313 (324)
T ss_pred CcccCC------------------CHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHhCCC
Confidence 543211 1112222334456899999 889999999988774
No 120
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=98.99 E-value=5.2e-08 Score=93.14 Aligned_cols=243 Identities=19% Similarity=0.170 Sum_probs=129.9
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeec-CChhhH
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK-WDEVVS 185 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 185 (535)
+||+|+|+... .. ..+.......+.++||++++.+.... .....+....+...+....++++..... ...+..
T Consensus 1 ~~D~H~H~~~~--~~--~~~~~~~l~~~~~~gv~~~v~~~~~~--~~~~~~~~la~~~~~i~~~~G~hP~~~~~~~~~~~ 74 (251)
T cd01310 1 LIDTHCHLDFP--QF--DADRDDVLARAREAGVIKIIVVGTDL--KSSKRALELAKKYDNVYAAVGLHPHDADEHVDEDL 74 (251)
T ss_pred CEEeeeCCCch--hh--ccCHHHHHHHHHHcCCCEEEEeCCCH--HHHHHHHHHHHhCCCeEEEEeeCcchhhcCCHHHH
Confidence 68999998754 11 12233445667789999999775431 1222222222222222223333322111 112335
Q ss_pred HHHHHHHHHcCCCEE-EEEeecCCCCc---CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009410 186 DEMEVMVKEKGINSF-KFFMAYKGSFM---INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 186 ~~~~~~~~~~g~~~i-k~~~~~~~~~~---~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
+++.+.....+..++ ++.+++..... ...+.++.+++.|.+.++++.+|+.... .
T Consensus 75 ~~l~~~~~~~~~~~IGeiGld~~~~~~~~~~q~~~~~~~~~~a~e~~~pv~iH~~~~~--~------------------- 133 (251)
T cd01310 75 DLLELLAANPKVVAIGEIGLDYYRDKSPREVQKEVFRAQLELAKELNLPVVIHSRDAH--E------------------- 133 (251)
T ss_pred HHHHHHhcCCCEEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeCch--H-------------------
Confidence 555555533455555 23333221111 3457789999999999999999986431 1
Q ss_pred cCChhhHHHHHHHHHHHHHhcC-CCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEc
Q 009410 262 SRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMS 340 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (535)
.++++..+++ ....+.|...... +.++.+.+.|+.+..++... .
T Consensus 134 ------------~~~~l~~~~~~~~~~i~H~~~~~~-~~~~~~~~~g~~~~~~~~~~-------------~--------- 178 (251)
T cd01310 134 ------------DVLEILKEYGPPKRGVFHCFSGSA-EEAKELLDLGFYISISGIVT-------------F--------- 178 (251)
T ss_pred ------------HHHHHHHhcCCCCCEEEEccCCCH-HHHHHHHHcCCEEEeeeeec-------------c---------
Confidence 1233334443 3345667765433 56777777887776543310 0
Q ss_pred CCCCCcccHHHHHHHHhcC--CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhH
Q 009410 341 PPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTST 418 (535)
Q Consensus 341 p~~r~~~~~~~~~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~ 418 (535)
.....+..+.+.+ -+++++||+ |+..... +...+ +....+...+..+....|++.+++.+..+.
T Consensus 179 ------~~~~~~~~~~~~~~~dril~~TD~-p~~~~~~------~~~~~-~~~~~~~~~~~~la~~~gl~~e~~~~~~~~ 244 (251)
T cd01310 179 ------KNANELREVVKEIPLERLLLETDS-PYLAPVP------FRGKR-NEPAYVKHVAEKIAELKGISVEEVAEVTTE 244 (251)
T ss_pred ------CCCHHHHHHHHhCChHHEEEcccC-CCCCCCC------CCCCC-CCChhHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 0001244444443 468999996 3322110 00000 111123334444444467999999999999
Q ss_pred HHHHHcC
Q 009410 419 ECARIFN 425 (535)
Q Consensus 419 ~~A~~lg 425 (535)
|++++||
T Consensus 245 N~~~ll~ 251 (251)
T cd01310 245 NAKRLFG 251 (251)
T ss_pred HHHHHhC
Confidence 9999986
No 121
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=98.93 E-value=2.2e-07 Score=92.38 Aligned_cols=144 Identities=13% Similarity=0.107 Sum_probs=91.9
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
.+.+.+..+++.|+++|+++.+|+.+........+.+...| .. .+.|+
T Consensus 170 ~~~~~~~~~~~~A~~~g~~v~~H~~E~~~~~~~~~a~~~~g-------------------------------~~-~i~H~ 217 (325)
T cd01320 170 FPPEKFVRAFQRAREAGLRLTAHAGEAGGPESVRDALDLLG-------------------------------AE-RIGHG 217 (325)
T ss_pred CCHHHHHHHHHHHHHCCCceEEeCCCCCCHHHHHHHHHHcC-------------------------------Cc-ccchh
Confidence 37899999999999999999999964422222222221122 11 35677
Q ss_pred cCHH-HHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCC
Q 009410 292 MSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (535)
Q Consensus 292 ~~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~ 370 (535)
.... ..+.++.+++.|+.+..||..+...... ..+ ...+++.++++|+++++|||+.+
T Consensus 218 ~~l~~~~~~~~~l~~~gi~v~~~P~sn~~l~~~-----------~~~----------~~~p~~~l~~~Gv~v~lgTD~~~ 276 (325)
T cd01320 218 IRAIEDPELVKRLAERNIPLEVCPTSNVQTGAV-----------KSL----------AEHPLRELLDAGVKVTINTDDPT 276 (325)
T ss_pred hccCccHHHHHHHHHcCCeEEECCCcccccccc-----------CCc----------ccChHHHHHHCCCEEEECCCCCc
Confidence 6652 1268999999999999999864321100 000 11338999999999999999754
Q ss_pred CChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 371 FNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
.... . +...+..++...++++.+ |..+|.|+++...+.
T Consensus 277 ~~~~-~-----------------~~~e~~~~~~~~~l~~~e-l~~~~~na~~~~f~~ 314 (325)
T cd01320 277 VFGT-Y-----------------LTDEYELLAEAFGLTEEE-LKKLARNAVEASFLS 314 (325)
T ss_pred ccCC-C-----------------HHHHHHHHHHHcCCCHHH-HHHHHHHHHHHhCCC
Confidence 3221 1 111222333345799999 566889999987763
No 122
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=98.92 E-value=1.1e-07 Score=90.97 Aligned_cols=244 Identities=18% Similarity=0.147 Sum_probs=123.5
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecC-ChhhH
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKW-DEVVS 185 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 185 (535)
|||+|+|+... ... .+.......+..+|+++++++.... . ....+....+..++.....+++...... ..+..
T Consensus 1 ~iD~H~Hl~~~--~~~--~~~~~~~~~~~~~Gv~~~v~~~~~~-~-~~~~~~~~~~~~~~i~~~~GihP~~~~~~~~~~~ 74 (252)
T TIGR00010 1 LIDAHCHLDFL--DFE--EDVEEVIERAKAAGVTAVVAVGTDL-E-DFLRALELAEKYPNVYAAVGVHPLDVDDDTKEDI 74 (252)
T ss_pred CEEeccCCCCh--hhc--cCHHHHHHHHHHcCCCEEEEecCCH-H-HHHHHHHHHHHCCCEEEEEEeCcchhhcCCHHHH
Confidence 69999998744 111 1334446777889999999774331 1 1122222222222323333333211111 12334
Q ss_pred HHHHHHHHHcCCCEEEEE-eecCCCCc---CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009410 186 DEMEVMVKEKGINSFKFF-MAYKGSFM---INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~-~~~~~~~~---~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
+++.+.++..+..+++.. +++..... ...+.+++.++.|.+.|+++.+|+.... ...++.+
T Consensus 75 ~~l~~~l~~~~~~~iGEiGld~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~--~~~~~~l------------- 139 (252)
T TIGR00010 75 KELERLAAHPKVVAIGETGLDYYKADEYKRRQEEVFRAQLQLAEELNLPVIIHARDAE--EDVLDIL------------- 139 (252)
T ss_pred HHHHHHccCCCEEEEEecccCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEecCcc--HHHHHHH-------------
Confidence 455554433344444332 22211111 0247888999999999999999996432 1112211
Q ss_pred cCChhhHHHHHHHHHHHHHhcC-CCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEc
Q 009410 262 SRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMS 340 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (535)
.+.+ ....+.|....+. +.+..+.+.|+.+..+.... + .
T Consensus 140 ------------------~~~~~~~~~i~H~~~~~~-~~~~~~~~~g~~~~~~~~~~---~----------~-------- 179 (252)
T TIGR00010 140 ------------------REEKPKVGGVLHCFTGDA-ELAKKLLDLGFYISISGIVT---F----------K-------- 179 (252)
T ss_pred ------------------HhcCCCCCEEEEccCCCH-HHHHHHHHCCCeEeeceeEe---c----------C--------
Confidence 1221 2234668765443 66777777787776542210 0 0
Q ss_pred CCCCCcccHHHHHHHHhcC--CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhH
Q 009410 341 PPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTST 418 (535)
Q Consensus 341 p~~r~~~~~~~~~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~ 418 (535)
....+.++++.. -+++++||....... .+.....+ ...+......+....|++++++.++++.
T Consensus 180 -------~~~~~~~~i~~~~~dril~~TD~p~~~~~-------~~~~~~~~-p~~i~~~~~~~a~~~g~~~~~~~~~~~~ 244 (252)
T TIGR00010 180 -------NAKSLREVVRKIPLERLLVETDSPYLAPV-------PYRGKRNE-PAFVRYTVEAIAEIKGMDVEELAQITTK 244 (252)
T ss_pred -------CcHHHHHHHHhCCHHHeEecccCCCCCCC-------CCCCCCCC-ChhHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 002244555543 479999996321110 01100000 0012222222222347999999999999
Q ss_pred HHHHHcCC
Q 009410 419 ECARIFNV 426 (535)
Q Consensus 419 ~~A~~lgl 426 (535)
||+++|++
T Consensus 245 N~~~~~~~ 252 (252)
T TIGR00010 245 NAKRLFGL 252 (252)
T ss_pred HHHHHhCc
Confidence 99999975
No 123
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=98.82 E-value=8.8e-07 Score=86.72 Aligned_cols=263 Identities=15% Similarity=0.094 Sum_probs=135.1
Q ss_pred cccccccccccccCCC---------Cc---hhhhHHHHHHHHhCCcEEEeccccCCC-CChHHHHHHHHHHhcccccccc
Q 009410 106 GGIDPHTHLAMEFMGS---------ET---IDDFFSGQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYG 172 (535)
Q Consensus 106 GlID~H~H~~~~~~g~---------~~---~~~~~~~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 172 (535)
|++.+|=|+...+.+. .. .+........+.++|||+++|...... .......+...+.+.+.+...|
T Consensus 1 g~~~~heh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvttiv~~~~~~~~~~~~~~~~~~~~~g~~v~~~~G 80 (293)
T cd00530 1 GVTLTHEHLIIDSSGFVRDPPEVDDFDLADVEAAKEELKRFRAHGGRTIVDATPPGIGRDVEKLAEVARATGVNIVAATG 80 (293)
T ss_pred CcccccCCeeecChhhccCcccccccchhhHHHHHHHHHHHHHcCCCeEEEcCCcccCcCHHHHHHHHHHhCCcEEEecc
Confidence 6778888877653221 11 122233455678899999999975422 2233333333333334455555
Q ss_pred eeeeeec---CChhhHHHHHH----HHHH----cC--CCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-
Q 009410 173 FHMAITK---WDEVVSDEMEV----MVKE----KG--INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG- 238 (535)
Q Consensus 173 ~~~~~~~---~~~~~~~~~~~----~~~~----~g--~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~- 238 (535)
++..... ......+++.+ .... .+ +..++.............+.+++.++.|++.|+++.+|+...
T Consensus 81 ~hp~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~IGEigld~~~~~~q~~~f~~~~~lA~~~~~Pv~iH~~~~~ 160 (293)
T cd00530 81 FYKDAFYPEWVRLRSVEELTDMLIREIEEGIEGTGIKAGIIKEAGGSPAITPLEEKVLRAAARAQKETGVPISTHTQAGL 160 (293)
T ss_pred cCCCccChHHHhhCCHHHHHHHHHHHHHhccccCCcCceEEEEeecCCCCCHHHHHHHHHHHHHHHHHCCeEEEcCCCCc
Confidence 5543211 00111122221 1111 11 122322211112222335678899999999999999998643
Q ss_pred hhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc-CHHHHHHHHHHHHcCCcEEeccccc
Q 009410 239 DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIGEPVVS 317 (535)
Q Consensus 239 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~-~~~~~~~~~~~~~~g~~v~~~~~~~ 317 (535)
......++.+.+.|+. ..++.+.|+. +.+ .+.+..+.+.|+.+..+....
T Consensus 161 ~~~~~~l~~l~~~g~~----------------------------~~~~vi~H~~~~~~-~~~~~~~~~~G~~i~~~~~~~ 211 (293)
T cd00530 161 TMGLEQLRILEEEGVD----------------------------PSKVVIGHLDRNDD-PDYLLKIAALGAYLEFDGIGK 211 (293)
T ss_pred cccHHHHHHHHHcCCC----------------------------hhheEEeCCCCCCC-HHHHHHHHhCCCEEEeCCCCc
Confidence 1222223222222221 1235788997 333 377888888997776553210
Q ss_pred eEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCC--eEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHH
Q 009410 318 GLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMH 395 (535)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv--~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~ 395 (535)
.- ....++ .......++++++.|. .++++||.. ..... ++...+++... +.
T Consensus 212 ~~-----------------~~~~~~--~~~~~~~l~~~~~~~~~d~ill~TD~p-~~~~~------~~~~~~~~~~~-~~ 264 (293)
T cd00530 212 DK-----------------IFGYPS--DETRADAVKALIDEGYGDRLLLSHDVF-RKSYL------EKRYGGHGYDY-IL 264 (293)
T ss_pred cc-----------------ccCCCC--HHHHHHHHHHHHHCCCcCCEEEeCCcC-chhhh------hhccCCCChHH-HH
Confidence 00 000000 0112345788888886 679999953 32211 11111112222 22
Q ss_pred HHHHHHHhcCCCCHHHHHHHHhHHHHHHc
Q 009410 396 LVWDTMVESGQISVTDYVRLTSTECARIF 424 (535)
Q Consensus 396 ~~~~~~~~~~~ls~~eal~~~T~~~A~~l 424 (535)
..+...+...|++.+++.+..|.||+++|
T Consensus 265 ~~~~~~~~~~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 265 TRFIPRLRERGVTEEQLDTILVENPARFL 293 (293)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHCHHHhC
Confidence 22224445667999999999999999976
No 124
>PRK09358 adenosine deaminase; Provisional
Probab=98.77 E-value=1.3e-06 Score=87.25 Aligned_cols=144 Identities=13% Similarity=0.067 Sum_probs=90.2
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEE
Q 009410 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (535)
Q Consensus 211 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 290 (535)
..+.+.+.++++.|++.|+++.+|+..........+.+... |.. .+.|
T Consensus 178 ~~~~~~~~~~~~~A~~~g~~~~~H~~E~~~~~~~~~al~~l-------------------------------g~~-ri~H 225 (340)
T PRK09358 178 GFPPSKFARAFDRARDAGLRLTAHAGEAGGPESIWEALDEL-------------------------------GAE-RIGH 225 (340)
T ss_pred CCCHHHHHHHHHHHHHCCCCeEEcCCCCCchhHHHHHHHHc-------------------------------CCc-ccch
Confidence 35788999999999999999999996432111111111111 222 2567
Q ss_pred ccCHH-HHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCC
Q 009410 291 VMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (535)
Q Consensus 291 ~~~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~ 369 (535)
+.... ..+.++.+++.|+.+..||+++....... .+ ...++++++++|+++++|||+.
T Consensus 226 g~~l~~~~~~~~~l~~~gi~v~~cP~Sn~~l~~~~-----------~~----------~~~pi~~l~~~Gv~v~lgTD~~ 284 (340)
T PRK09358 226 GVRAIEDPALMARLADRRIPLEVCPTSNVQTGAVP-----------SL----------AEHPLKTLLDAGVRVTINTDDP 284 (340)
T ss_pred hhhhccCHHHHHHHHHcCCeEEECCCccccccccC-----------Cc----------ccChHHHHHHCCCEEEECCCCC
Confidence 76652 12679999999999999998632211100 00 1133899999999999999975
Q ss_pred CCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 370 AFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
..... . +...+..+....+++++++ ..++.|+.+.-.+
T Consensus 285 ~~~~~-~-----------------l~~e~~~~~~~~~l~~~el-~~l~~nai~~sf~ 322 (340)
T PRK09358 285 LVFGT-T-----------------LTEEYEALAEAFGLSDEDL-AQLARNALEAAFL 322 (340)
T ss_pred cccCC-C-----------------HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHCC
Confidence 43211 1 1122223333457999994 6678888877655
No 125
>PRK10812 putative DNAse; Provisional
Probab=98.73 E-value=2e-06 Score=82.11 Aligned_cols=249 Identities=18% Similarity=0.171 Sum_probs=135.3
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChhhHH
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (535)
+||+|+|+..... ....++.......+...||..++..+.... .... ........+..+..+|+|+.... ..+..+
T Consensus 3 ~iDtH~Hl~~~~~-~~~~~d~~~vl~~a~~~gv~~~~~~~~~~~-~~~~-~~~l~~~~~~v~~~~GiHP~~~~-~~~~~~ 78 (265)
T PRK10812 3 LVDSHCHLDGLDY-QSLHKDVDDVLAKAAARDVKFCLAVATTLP-GYRH-MRDLVGERDNVVFSCGVHPLNQD-EPYDVE 78 (265)
T ss_pred eEEeccCCCCccc-hhhhcCHHHHHHHHHHcCCCEEEEeCCCHH-HHHH-HHHHHhhCCCeEEEEEeCCCCCC-ChhHHH
Confidence 7999999964200 011234445577788899988875532211 1222 22222222334445566553322 223345
Q ss_pred HHHHHHHHcCCCEE-EEEeecCC---CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009410 187 EMEVMVKEKGINSF-KFFMAYKG---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 187 ~~~~~~~~~g~~~i-k~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
.+.++.+...+..+ .+.+++.. ....-.+.+++.++.|.+.++++.+|+.... .+.++.+.+.+..
T Consensus 79 ~l~~~~~~~~vvaIGEiGLD~~~~~~~~~~Q~~vf~~ql~lA~e~~~Pv~iH~r~a~--~~~l~iL~~~~~~-------- 148 (265)
T PRK10812 79 ELRRLAAEEGVVAMGETGLDYYYTPETKVRQQESFRHHIQIGRELNKPVIVHTRDAR--ADTLAILREEKVT-------- 148 (265)
T ss_pred HHHHHhcCCCEEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeCch--HHHHHHHHhhcCC--------
Confidence 55555533344444 34445431 1112356789999999999999999985432 1222222211110
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCC
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPP 342 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 342 (535)
..+. +.|+.+.+. +.++.+.+.|+.+...... .+
T Consensus 149 --------------------~~~~-v~H~fsG~~-~~a~~~~~~G~~is~~g~~-------------------t~----- 182 (265)
T PRK10812 149 --------------------DCGG-VLHCFTEDR-ETAGKLLDLGFYISFSGIV-------------------TF----- 182 (265)
T ss_pred --------------------CCCE-EEEeecCCH-HHHHHHHHCCCEEEECeee-------------------ec-----
Confidence 1123 578877664 7788888888776653221 00
Q ss_pred CCCcccHHHHHHHHhcC--CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHH
Q 009410 343 IRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTEC 420 (535)
Q Consensus 343 ~r~~~~~~~~~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~ 420 (535)
.....++++++.+ -++.+.||+ |+.... ++..-++. -..+...++.+.+-.|++.+++.+..+.|+
T Consensus 183 ----~~~~~~~~~~~~ipldrlLlETD~-P~~~p~------~~~g~~n~-P~~i~~v~~~ia~l~g~~~eei~~~~~~N~ 250 (265)
T PRK10812 183 ----RNAEQLRDAARYVPLDRLLVETDS-PYLAPV------PHRGKENQ-PAMVRDVAEYMAVLKGVSVEELAQVTTDNF 250 (265)
T ss_pred ----CccHHHHHHHHhCChhhEEEecCC-CCCCCc------CCCCCCCC-cHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 0013466666665 469999995 443221 22211110 012333333333345799999999999999
Q ss_pred HHHcCCC
Q 009410 421 ARIFNVY 427 (535)
Q Consensus 421 A~~lgl~ 427 (535)
.++|+++
T Consensus 251 ~~lf~~~ 257 (265)
T PRK10812 251 ARLFHID 257 (265)
T ss_pred HHHHCCC
Confidence 9999984
No 126
>PRK09875 putative hydrolase; Provisional
Probab=98.70 E-value=4.9e-06 Score=80.02 Aligned_cols=260 Identities=14% Similarity=0.100 Sum_probs=142.3
Q ss_pred cccccccccccccCCCC--------chhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHh-cccccccceeee
Q 009410 106 GGIDPHTHLAMEFMGSE--------TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA-KNSCMDYGFHMA 176 (535)
Q Consensus 106 GlID~H~H~~~~~~g~~--------~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 176 (535)
|+..+|=|+...+.+.. ..+.....+..+.+.|+.|++|+....-+.....+.+..+.. -+.....|++..
T Consensus 7 G~tl~HEHl~~~~~~~~~~~~~~l~~~~~~~~el~~~~~~Gg~tiVd~T~~g~GRd~~~l~~is~~tgv~Iv~~TG~y~~ 86 (292)
T PRK09875 7 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQD 86 (292)
T ss_pred CcceecCCeEecChhhcCCcccccccHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHhCCcEEEcCcCCCC
Confidence 78889999866532211 122233344556789999999997555444444444444433 233333444332
Q ss_pred eec------CC-hhhHHHHHHHHHHcC-------CCEE-EEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhH
Q 009410 177 ITK------WD-EVVSDEMEVMVKEKG-------INSF-KFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (535)
Q Consensus 177 ~~~------~~-~~~~~~~~~~~~~~g-------~~~i-k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~ 241 (535)
... .+ ++..+.+.+-+ ..| +..+ ++..++........+.+++...++.+.|.++.+|.......
T Consensus 87 ~~~p~~~~~~~~e~la~~~i~ei-~~Gi~gt~ikaGvIGeiG~~~~~it~~E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~g 165 (292)
T PRK09875 87 AFFPEHVATRSVQELAQEMVDEI-EQGIDGTELKAGIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMG 165 (292)
T ss_pred ccCCHHHhcCCHHHHHHHHHHHH-HHhhccCCCcccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCcEEEcCCCccch
Confidence 211 11 22222222222 122 2345 34333222222335667888888889999999997543222
Q ss_pred HHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEee
Q 009410 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVL 321 (535)
Q Consensus 242 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 321 (535)
.+.++.+.+.|+. -.++.+.|.......+.+..+.+.|+.+-.+...
T Consensus 166 ~e~l~il~e~Gvd----------------------------~~rvvi~H~d~~~d~~~~~~l~~~G~~l~fD~~g----- 212 (292)
T PRK09875 166 LEQLALLQAHGVD----------------------------LSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIG----- 212 (292)
T ss_pred HHHHHHHHHcCcC----------------------------cceEEEeCCCCCCCHHHHHHHHHcCCEEEeccCC-----
Confidence 2333333333332 1268899997555557888888999888765321
Q ss_pred CcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcC--CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHH
Q 009410 322 DDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWD 399 (535)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~ 399 (535)
.. .+ .|. ......+..+.+.| -++.+++|........ +|.. .|+..-+..++.
T Consensus 213 -----------~~-~~--~pd---~~r~~~i~~L~~~Gy~drilLS~D~~~~~~~~------~~gg--~G~~~i~~~~ip 267 (292)
T PRK09875 213 -----------KN-SY--YPD---EKRIAMLHALRDRGLLNRVMLSMDITRRSHLK------ANGG--YGYDYLLTTFIP 267 (292)
T ss_pred -----------Cc-cc--CCH---HHHHHHHHHHHhcCCCCeEEEeCCCCCccccc------ccCC--CChhHHHHHHHH
Confidence 00 00 110 01135677788886 5689999964321110 1221 144444444443
Q ss_pred HHHhcCCCCHHHHHHHHhHHHHHHcC
Q 009410 400 TMVESGQISVTDYVRLTSTECARIFN 425 (535)
Q Consensus 400 ~~~~~~~ls~~eal~~~T~~~A~~lg 425 (535)
.+. ..|+|.+++=++...||+++|+
T Consensus 268 ~L~-~~Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 268 QLR-QSGFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred HHH-HcCCCHHHHHHHHHHCHHHHhC
Confidence 333 4479999999999999999874
No 127
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=98.69 E-value=3.8e-06 Score=78.78 Aligned_cols=243 Identities=19% Similarity=0.150 Sum_probs=140.0
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecC--Chhh
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKW--DEVV 184 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 184 (535)
|||+|+|+... ...++.......+...||+.+...+.... .....-......+..+...|+|+.. .. .++.
T Consensus 3 liDtH~HL~~~----~~~~d~~~vi~~a~~~gv~~~~~~g~~~~--~~~~~~~la~~y~~v~~~~G~HP~~-~~~~~~~~ 75 (256)
T COG0084 3 LIDTHCHLDFE----EFDEDRDEVIARAREAGVKKMVVVGTDLE--DFKRALELAEKYPNVYAAVGVHPLD-ADEHSEED 75 (256)
T ss_pred cEEeeeCCCch----hhcCCHHHHHHHHHHcCCcEEEEeecCHH--HHHHHHHHHHhCCCeEEEEeeCCCc-cccccHHH
Confidence 79999999853 23334444567788899999986643322 2223333333444556666666644 22 2456
Q ss_pred HHHHHHHHHH-cCCCEEE-EEeecCCCCc----CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009410 185 SDEMEVMVKE-KGINSFK-FFMAYKGSFM----INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (535)
Q Consensus 185 ~~~~~~~~~~-~g~~~ik-~~~~~~~~~~----~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (535)
.+.+.+++.. ..+..+. +.++|.-... .-.+.+++-++.|++.++|+.+|+.... .+..+.+
T Consensus 76 ~~~l~~~~~~~~~vvaIGEiGLDy~~~~~~~~~~Q~~~F~~ql~lA~~~~lPviIH~R~A~--~d~~~iL---------- 143 (256)
T COG0084 76 LEELEQLAEHHPKVVAIGEIGLDYYWDKEPDKERQEEVFEAQLELAKELNLPVIIHTRDAH--EDTLEIL---------- 143 (256)
T ss_pred HHHHHHHHhcCCCeEEEEecccCccccccccHHHHHHHHHHHHHHHHHcCCCEEEEccccH--HHHHHHH----------
Confidence 6677777642 3444444 2233332111 1356789999999999999999996542 1222222
Q ss_pred ccccCChhhHHHHHHHHHHHHHhcC-CCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcccccee
Q 009410 259 HALSRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (535)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (535)
+..+ ..-.+.||.+.+. +..+.+.+.|..+...... .|..
T Consensus 144 ---------------------~~~~~~~~gi~HcFsGs~-e~a~~~~d~G~yisisG~i-------------tfk~---- 184 (256)
T COG0084 144 ---------------------KEEGAPVGGVLHCFSGSA-EEARKLLDLGFYISISGIV-------------TFKN---- 184 (256)
T ss_pred ---------------------HhcCCCCCEEEEccCCCH-HHHHHHHHcCeEEEECcee-------------ecCC----
Confidence 2222 1235789988876 8888888899776654432 0110
Q ss_pred EEcCCCCCcccHHHHHHHHhc--CCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHH
Q 009410 338 VMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRL 415 (535)
Q Consensus 338 ~~~p~~r~~~~~~~~~~~l~~--Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~ 415 (535)
+ ..++++++. =-++++-||+ |+.... ||..-.+ --..+...+..+.+--+++++++-+.
T Consensus 185 --------a---~~~~ev~~~iPldrLL~ETDs-Pyl~P~------p~rGkrN-eP~~v~~v~~~iAelk~~~~eeva~~ 245 (256)
T COG0084 185 --------A---EKLREVARELPLDRLLLETDA-PYLAPV------PYRGKRN-EPAYVRHVAEKLAELKGISAEEVAEI 245 (256)
T ss_pred --------c---HHHHHHHHhCCHhHeEeccCC-CCCCCc------CCCCCCC-CchHHHHHHHHHHHHhCCCHHHHHHH
Confidence 0 123333332 1238899994 543332 3433222 00123333334444557999999999
Q ss_pred HhHHHHHHcCC
Q 009410 416 TSTECARIFNV 426 (535)
Q Consensus 416 ~T~~~A~~lgl 426 (535)
.|.|.-++|++
T Consensus 246 t~~N~~~lf~~ 256 (256)
T COG0084 246 TTENAKRLFGL 256 (256)
T ss_pred HHHHHHHHhcC
Confidence 99999999874
No 128
>PRK10425 DNase TatD; Provisional
Probab=98.48 E-value=5.4e-06 Score=78.75 Aligned_cols=244 Identities=12% Similarity=0.088 Sum_probs=130.8
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeee-cCChhhH
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (535)
|||+|+|+... . ..++.......+...||..++..+.... .... ........+..+..+|+|+... ...++..
T Consensus 1 ~iDtH~HL~~~---~-~~~d~~~vl~~a~~~gv~~~i~~~~~~~-~~~~-~~~l~~~~~~v~~~~GiHP~~~~~~~~~~~ 74 (258)
T PRK10425 1 MFDIGVNLTSS---Q-FAKDRDDVVARAFAAGVNGMLITGTNLR-ESQQ-AQKLARQYPSCWSTAGVHPHDSSQWQAATE 74 (258)
T ss_pred CEEeeeCcCCh---h-hhccHHHHHHHHHHCCCCEEEEeCCCHH-HHHH-HHHHHHhCCCEEEEEEeCcCccccCCHHHH
Confidence 68999998643 1 1234555577788899988875543211 1222 2222222333444566665332 2223445
Q ss_pred HHHHHHHHHcCCCEEE-EEeecCCC---CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009410 186 DEMEVMVKEKGINSFK-FFMAYKGS---FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik-~~~~~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
+.+.++.+.....++. +.+++... ...-.+.+++.++.|.++++|+.+|+.... .+.++.+...
T Consensus 75 ~~l~~~~~~~~~vaIGEiGLDy~~~~~~~~~Q~~vF~~ql~lA~~~~~Pv~iH~r~a~--~~~l~iL~~~---------- 142 (258)
T PRK10425 75 EAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLAIAAELNMPVFMHCRDAH--ERFMALLEPW---------- 142 (258)
T ss_pred HHHHHhccCCCEEEEeeeeeccccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEeCch--HHHHHHHHHh----------
Confidence 5555555322222333 33343211 111146789999999999999999996432 2222221110
Q ss_pred cCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcC
Q 009410 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 341 (535)
. ...+-.+.|+.+.+. +.++.+.+.|..+......- .
T Consensus 143 ------------------~-~~~~~~i~H~fsG~~-~~~~~~l~~G~~~si~g~i~----------------------~- 179 (258)
T PRK10425 143 ------------------L-DKLPGAVLHCFTGTR-EEMQACLARGLYIGITGWVC----------------------D- 179 (258)
T ss_pred ------------------c-cCCCCeEEEecCCCH-HHHHHHHHCCCEEEECceee----------------------c-
Confidence 0 011113579988776 78888888887776543210 0
Q ss_pred CCCCcccHHHHHHHHhc-C-CeEEEeCCCCCCChhhhhcCCCCcc-------cCcchHHHHHHHHHHHHHhcCCCCHHHH
Q 009410 342 PIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFR-------KIPNGIEERMHLVWDTMVESGQISVTDY 412 (535)
Q Consensus 342 ~~r~~~~~~~~~~~l~~-G-v~~~lgtD~~~~~~~~~~~~~~~~~-------~~~~g~~~~l~~~~~~~~~~~~ls~~ea 412 (535)
..+ ...++++++. . -.+++-||+ |+.... +|. +-|. .+...+..+.+--+++.+++
T Consensus 180 ~~~----~~~~~~~~~~ipldrlLlETDa-P~l~P~------~~~~~~~~~~n~P~----~i~~v~~~iA~l~~~~~~~v 244 (258)
T PRK10425 180 ERR----GLELRELLPLIPAERLLLETDA-PYLLPR------DLTPKPASRRNEPA----FLPHILQRIAHWRGEDAAWL 244 (258)
T ss_pred ccc----cHHHHHHHHhCChHHEEEeccC-CCCCCC------CcCCCCCCCCCCcH----HHHHHHHHHHHHHCcCHHHH
Confidence 000 0123333332 1 248899995 443221 121 1122 33344444555557999999
Q ss_pred HHHHhHHHHHHcCC
Q 009410 413 VRLTSTECARIFNV 426 (535)
Q Consensus 413 l~~~T~~~A~~lgl 426 (535)
.+..+.|.-++||+
T Consensus 245 ~~~~~~N~~~lf~~ 258 (258)
T PRK10425 245 AATTDANARTLFGL 258 (258)
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999999874
No 129
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=98.47 E-value=8.3e-06 Score=77.90 Aligned_cols=244 Identities=18% Similarity=0.164 Sum_probs=126.4
Q ss_pred cccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcc-cccccceeeeeecC-ChhhH
Q 009410 108 IDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN-SCMDYGFHMAITKW-DEVVS 185 (535)
Q Consensus 108 ID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~ 185 (535)
||+|+|+... ...++.......+...|++.++.+..... ... .........+. ....+|+|+..... ..+..
T Consensus 1 iD~H~Hl~~~----~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-~~~-~~~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~ 74 (255)
T PF01026_consen 1 IDAHCHLDSP----RFEEDRPEVLERAREAGVSAIIIVSTDPE-DWE-RVLELASQYPDRVYPALGIHPWEAHEVNEEDL 74 (255)
T ss_dssp EEEEE-TTSG----GGTTTHHHHHHHHHHTTEEEEEEEESSHH-HHH-HHHHHHHHTTTEEEEEE---GGGGGGHSHHHH
T ss_pred CcCccCCCCh----hhCcCHHHHHHHHHHcCCCEEEEcCCCHH-HhH-HHHHHHhcCCCeEEEEecCCcchhhhhhHHHH
Confidence 7999999763 11223444467788999999986643321 122 22222222222 45556666533322 23344
Q ss_pred HHHHHH--HHHcCCCEEE-EEeecCCCC----cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009410 186 DEMEVM--VKEKGINSFK-FFMAYKGSF----MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (535)
Q Consensus 186 ~~~~~~--~~~~g~~~ik-~~~~~~~~~----~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (535)
+.+.++ .......++. +.+++.-.. ..-.+.+++.++.|.++++++.+|+.... .+.++.+.+.+.
T Consensus 75 ~~l~~l~~~~~~~~~aIGEiGLD~~~~~~~~~~~Q~~vF~~ql~lA~~~~~pv~iH~r~a~--~~~l~il~~~~~----- 147 (255)
T PF01026_consen 75 EELEELINLNRPKVVAIGEIGLDYYWRNEEDKEVQEEVFERQLELAKELNLPVSIHCRKAH--EELLEILKEYGP----- 147 (255)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEETTTTSSSGHHHHHHHHHHHHHHHHHHTCEEEEEEESHH--HHHHHHHHHTTG-----
T ss_pred HHHHHHHHhccccceeeeeeccCcccccCCcHHHHHHHHHHHHHHHHHhCCcEEEecCCcH--HHHHHHHHhccc-----
Confidence 556555 3233444443 334542111 12356789999999999999999997632 222322222211
Q ss_pred ccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeE
Q 009410 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (535)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (535)
.+. ..+.|+.+.+. +.++.+.+.|+.++..+.. . +.
T Consensus 148 -----------------------~~~-~~i~H~f~g~~-~~~~~~~~~g~~~S~~~~~---------~----~~------ 183 (255)
T PF01026_consen 148 -----------------------PNL-RVIFHCFSGSP-EEAKKFLDLGCYFSFSGAI---------T----FK------ 183 (255)
T ss_dssp -----------------------GTS-EEEETT--S-H-HHHHHHHHTTEEEEEEGGG---------G----ST------
T ss_pred -----------------------cce-eEEEecCCCCH-HHHHHHHhcCceEEecccc---------c----cc------
Confidence 111 45789977765 6777777788666554432 0 00
Q ss_pred EcCCCCCcccHHHHHHHHhc--CCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 009410 339 MSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLT 416 (535)
Q Consensus 339 ~~p~~r~~~~~~~~~~~l~~--Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~ 416 (535)
. .....++++. .-++.+.||. |+.... ++...++ .-..+...++.+.+..+++++++.+..
T Consensus 184 ------~---~~~~~~~~~~ip~drillETD~-P~~~~~------~~~~~~~-~p~~i~~~~~~la~~~~~~~e~~~~~~ 246 (255)
T PF01026_consen 184 ------N---SKKVRELIKAIPLDRILLETDA-PYLAPD------PYRGKPN-EPSNIPKVAQALAEIKGISLEELAQII 246 (255)
T ss_dssp ------T---SHHHHHHHHHS-GGGEEEE-BT-TSSECT------TSTTSE---GGGHHHHHHHHHHHHTSTHHHHHHHH
T ss_pred ------c---cHHHHHHHhcCChhhEEEcCCC-CcCCcc------ccCCCCC-ChHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 0 0223333332 2359999994 443221 2222111 001233334344444569999999999
Q ss_pred hHHHHHHcC
Q 009410 417 STECARIFN 425 (535)
Q Consensus 417 T~~~A~~lg 425 (535)
+.|..++||
T Consensus 247 ~~N~~r~f~ 255 (255)
T PF01026_consen 247 YENAKRLFG 255 (255)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhC
Confidence 999999886
No 130
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=98.46 E-value=3.7e-05 Score=73.21 Aligned_cols=248 Identities=15% Similarity=0.135 Sum_probs=130.8
Q ss_pred eecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeec-CCh
Q 009410 104 MPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK-WDE 182 (535)
Q Consensus 104 lPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 182 (535)
.+.+||+|+|+... ...++.......+...||+.++.++.... .....++ .....+..+..+|+|+.... ...
T Consensus 2 ~~~~iD~HcHl~~~----~~~~~~~~~l~~a~~~gv~~~~~~~~~~~-~~~~~~~-l~~~~~~v~~~~GiHP~~~~~~~~ 75 (258)
T PRK11449 2 ICRFIDTHCHFDFP----PFSGDEEASLQRAAQAGVGKIIVPATEAE-NFARVLA-LAERYQPLYAALGLHPGMLEKHSD 75 (258)
T ss_pred CceEEEeccCCCCh----hhccCHHHHHHHHHHCCCCEEEEeeCCHH-HHHHHHH-HHHhCCCEEEEEeeCcCccccCCH
Confidence 35689999998643 11223334466677889999886643211 2222222 22223334445566653322 223
Q ss_pred hhHHHHHHHHHHc--CCCEEE-EEeecCCCC---cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009410 183 VVSDEMEVMVKEK--GINSFK-FFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP 256 (535)
Q Consensus 183 ~~~~~~~~~~~~~--g~~~ik-~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (535)
+..+.+.++.... .+.++. +.+++.... ..-.+.+.+.++.|.++++++.+|+.... ....+.+...+.
T Consensus 76 ~~~~~l~~~l~~~~~~~~aIGEiGLD~~~~~~~~~~Q~~vf~~ql~lA~~~~~Pv~iH~r~a~--~~~~~il~~~~~--- 150 (258)
T PRK11449 76 VSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTH--DKLAMHLKRHDL--- 150 (258)
T ss_pred HHHHHHHHHHHhCCCCEEEEEecccCCCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEecCcc--HHHHHHHHhcCC---
Confidence 3445555444221 222332 222332111 12356789999999999999999996532 222222211110
Q ss_pred ccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccce
Q 009410 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336 (535)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (535)
..+ .+.|+.+.+. +..+.+.+.|..+...... . +.
T Consensus 151 --------------------------~~~-~i~H~fsG~~-~~a~~~l~~G~~iS~~g~i---------t----~~---- 185 (258)
T PRK11449 151 --------------------------PRT-GVVHGFSGSL-QQAERFVQLGYKIGVGGTI---------T----YP---- 185 (258)
T ss_pred --------------------------CCC-eEEEcCCCCH-HHHHHHHHCCCEEEeCccc---------c----cc----
Confidence 112 3678888775 7888888888766543221 0 00
Q ss_pred eEEcCCCCCcccHHHHHHHHhc--CCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHH
Q 009410 337 YVMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVR 414 (535)
Q Consensus 337 ~~~~p~~r~~~~~~~~~~~l~~--Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~ 414 (535)
....++++++. --++++.||++ +.... +|..-++ .-..+...++.+...-+++++++.+
T Consensus 186 -----------~~~~~~~~~~~ipldriL~ETD~P-~l~p~------~~~~~~n-~p~~~~~~~~~ia~l~~~~~~el~~ 246 (258)
T PRK11449 186 -----------RASKTRDVIAKLPLASLLLETDAP-DMPLN------GFQGQPN-RPEQAARVFDVLCELRPEPADEIAE 246 (258)
T ss_pred -----------CcHHHHHHHHhCChhhEEEecCCC-CCCCC------CCCCCCC-CChHHHHHHHHHHHHHCcCHHHHHH
Confidence 00223443332 12489999954 32211 2222211 0012333333434445799999999
Q ss_pred HHhHHHHHHcCC
Q 009410 415 LTSTECARIFNV 426 (535)
Q Consensus 415 ~~T~~~A~~lgl 426 (535)
..+.|..++||+
T Consensus 247 ~~~~N~~~lf~~ 258 (258)
T PRK11449 247 VLLNNTYTLFNV 258 (258)
T ss_pred HHHHHHHHHhCc
Confidence 999999999874
No 131
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=98.13 E-value=4.4e-05 Score=74.09 Aligned_cols=268 Identities=15% Similarity=0.113 Sum_probs=136.1
Q ss_pred cccccccccccccCCCC------------chhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHh-cccccccc
Q 009410 106 GGIDPHTHLAMEFMGSE------------TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA-KNSCMDYG 172 (535)
Q Consensus 106 GlID~H~H~~~~~~g~~------------~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 172 (535)
|+..+|=|+...+.+.. ..+.....++.+.+.|+.|++|+.....+.....+....+.. -+.....|
T Consensus 7 G~tl~HEHl~~d~~~~~~~~~~~~~~~~~~~~~~~~El~~~k~~Gg~tiVd~T~~g~GRd~~~l~~is~~tGv~II~~TG 86 (308)
T PF02126_consen 7 GFTLMHEHLLIDLSGFYKDPDEALDDRDEDVEAAVAELKEFKAAGGRTIVDATPIGLGRDVEALREISRRTGVNIIASTG 86 (308)
T ss_dssp SSEEEEEESEEETTTHHHHTGGGGCGHHHHHHHHHHHHHHHHHTTEEEEEE--SGGGTB-HHHHHHHHHHHT-EEEEEEE
T ss_pred CCeecccCeeecChhhccCCCcchhhhhhhHHHHHHHHHHHHHcCCCEEEecCCcccCcCHHHHHHHHHHhCCeEEEeCC
Confidence 77888888876532210 112222344556789999999996554443344444444333 23333444
Q ss_pred eeeeeecCC-------hhhHHHHHHHHHHcCC-------CEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 173 FHMAITKWD-------EVVSDEMEVMVKEKGI-------NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 173 ~~~~~~~~~-------~~~~~~~~~~~~~~g~-------~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
++.....+. ++..+.+.+-+ ..|. ..+|...++..........++++..++.+-|.++.+|....
T Consensus 87 ~y~~~~~p~~~~~~s~e~la~~~i~Ei-~~GidgT~ikaG~Ik~~~~~~~it~~E~k~lrAaa~A~~~TG~pI~~H~~~g 165 (308)
T PF02126_consen 87 FYKEPFYPEWVREASVEELADLFIREI-EEGIDGTGIKAGIIKEIGSSNPITPLEEKVLRAAARAHKETGAPISTHTGRG 165 (308)
T ss_dssp E-SGGCSCHHHHTSHHHHHHHHHHHHH-HT-STTSSB-ESEEEEEEBTTBCEHHHHHHHHHHHHHHHHHT-EEEEEESTT
T ss_pred CCccccCChhhhcCCHHHHHHHHHHHH-HhcCCCCccchhheeEeeccCCCCHHHHHHHHHHHHHHHHhCCeEEEcCCCC
Confidence 443221111 12222222222 3444 36777655432222335567777888888899999999665
Q ss_pred h-hHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccc
Q 009410 239 D-AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVS 317 (535)
Q Consensus 239 ~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~ 317 (535)
. ...+.++.+.+.|+.. .++.+.|+......+.+..+.+.|+.+-......
T Consensus 166 ~~~~~e~~~il~e~Gv~~----------------------------~rvvigH~D~~~D~~y~~~la~~G~~l~~D~~g~ 217 (308)
T PF02126_consen 166 TRMGLEQLDILEEEGVDP----------------------------SRVVIGHMDRNPDLDYHRELADRGVYLEFDTIGR 217 (308)
T ss_dssp GTCHHHHHHHHHHTT--G----------------------------GGEEETSGGGST-HHHHHHHHHTT-EEEETTTT-
T ss_pred CcCHHHHHHHHHHcCCCh----------------------------hHeEEeCCCCCCCHHHHHHHHhcCCEEEecCCcc
Confidence 4 4455566665555532 3578899986555677888888998887654421
Q ss_pred eEeeCcccccCcCccccceeEEcCCCCCc---ccHHHHHHHHhcCC--eEEEeCCCCCCChhhhhcCCCCcccCcchHHH
Q 009410 318 GLVLDDSWLWHSDFVTAAKYVMSPPIRAS---GHNKALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEE 392 (535)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~---~~~~~~~~~l~~Gv--~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~ 392 (535)
.++ ..+ .+|..... .....+..+.++|- +++++.|.... .... .+..-+.|...
T Consensus 218 ~~~-g~~--------------~~~~~~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~k-~~~~-----~~gg~g~~~~~ 276 (308)
T PF02126_consen 218 EFS-GKD--------------KNPRVGYPPDEERIELLKELIEEGYADQILLSHDIGRK-SRLY-----RYGGGGYGYIY 276 (308)
T ss_dssp B-T-TTT--------------TCHSCTTS-HHHHHHHHHHHHHTTTGGGEEE-HHHESE-EGSS-----SCCHHHHTTTH
T ss_pred ccc-Ccc--------------cCccCCCCCHHHHHHHHHHHHHcCCcCcEEEecccccc-cccc-----ccCCCCccHHH
Confidence 110 000 00001111 11246778888875 58999984321 0100 11100001111
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHc
Q 009410 393 RMHLVWDTMVESGQISVTDYVRLTSTECARIF 424 (535)
Q Consensus 393 ~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~l 424 (535)
-+..++- ..++.|+|.+++=++...||+++|
T Consensus 277 i~~~fiP-~L~~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 277 ILTRFIP-RLKERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp HHHTHHH-HHHHTTS-HHHHHHHHTHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCHHHHHHHHHHCHHHHc
Confidence 1122222 223557999999999999999987
No 132
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=98.07 E-value=0.00041 Score=61.82 Aligned_cols=234 Identities=14% Similarity=0.145 Sum_probs=126.2
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC--ChHHHHHHHHH-----------Hhcccccccce
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEK-----------KAKNSCMDYGF 173 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~-----------~~~~~~~~~~~ 173 (535)
+||+|+|+..- + .++ +.....+||.+++.+...+.. +......-+.+ .+-+..+.+|.
T Consensus 2 ~iD~HiH~d~r--~---~eD----lekMa~sGI~~Vit~AhdP~~~~~~~v~~~h~~rl~~~E~~Ra~~~Gl~~~vavGv 72 (254)
T COG1099 2 YIDSHIHLDVR--G---FED----LEKMALSGIREVITLAHDPYPMKTAEVYLDHFRRLLGVEPERAEKAGLKLKVAVGV 72 (254)
T ss_pred ccccccccccc--c---HHH----HHHHHHhChhhhhhcccCCCCcccHHHHHHHHHHHHccchhhHHhhCceeeEEecc
Confidence 69999998754 2 222 345566788888765332222 11111111111 11223444555
Q ss_pred eeeeec-CChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcC
Q 009410 174 HMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (535)
Q Consensus 174 ~~~~~~-~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g 252 (535)
+..... ..++..+++..+....++..+... +.........+.++.-++.|+++++|+.+|.+..+-.
T Consensus 73 HPr~iP~e~~~~l~~L~~~l~~e~VvAiGEi-GLe~~t~~E~evf~~QL~LA~e~dvPviVHTPr~nK~----------- 140 (254)
T COG1099 73 HPRAIPPELEEVLEELEELLSNEDVVAIGEI-GLEEATDEEKEVFREQLELARELDVPVIVHTPRRNKK----------- 140 (254)
T ss_pred CCCCCCchHHHHHHHHHhhcccCCeeEeeec-ccccCCHHHHHHHHHHHHHHHHcCCcEEEeCCCCcch-----------
Confidence 554332 234556666665533334444321 1111111235678899999999999999998654321
Q ss_pred CCCcccccccCChhhHHHHHHHHHHHHHhcCC---CEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCc
Q 009410 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNT---PLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHS 329 (535)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~ 329 (535)
+.+.+.++.....+. .+.+.|++. +.++.+-..++++-.+.+|.-
T Consensus 141 -----------------e~t~~ildi~~~~~l~~~lvvIDH~N~----etv~~vld~e~~vGlTvqPgK----------- 188 (254)
T COG1099 141 -----------------EATSKILDILIESGLKPSLVVIDHVNE----ETVDEVLDEEFYVGLTVQPGK----------- 188 (254)
T ss_pred -----------------hHHHHHHHHHHHcCCChhheehhcccH----HHHHHHHhccceEEEEecCCc-----------
Confidence 223344444444443 356778755 667767777777655544310
Q ss_pred CccccceeEEcCCCCCcccHHHHHHHHhcC-CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCC
Q 009410 330 DFVTAAKYVMSPPIRASGHNKALQAALATG-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQIS 408 (535)
Q Consensus 330 ~~~~~~~~~~~p~~r~~~~~~~~~~~l~~G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls 408 (535)
+.+ .+++.=..+-| -++.+.||......+ ++. ++...-. ++..|++
T Consensus 189 ---------lt~-------~eAveIV~ey~~~r~ilnSD~~s~~sd-------~la---------vprtal~-m~~~gv~ 235 (254)
T COG1099 189 ---------LTV-------EEAVEIVREYGAERIILNSDAGSAASD-------PLA---------VPRTALE-MEERGVG 235 (254)
T ss_pred ---------CCH-------HHHHHHHHHhCcceEEEeccccccccc-------chh---------hhHHHHH-HHHhcCC
Confidence 000 02222222334 678999995433222 121 2222211 2345799
Q ss_pred HHHHHHHHhHHHHHHcCC
Q 009410 409 VTDYVRLTSTECARIFNV 426 (535)
Q Consensus 409 ~~eal~~~T~~~A~~lgl 426 (535)
.+++-+-+-.|+-+++|+
T Consensus 236 ~~~i~kV~~~NA~~~~~l 253 (254)
T COG1099 236 EEEIEKVVRENALSFYGL 253 (254)
T ss_pred HHHHHHHHHHHHHHHhCc
Confidence 999999999999999886
No 133
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=98.05 E-value=0.00054 Score=64.34 Aligned_cols=242 Identities=14% Similarity=0.063 Sum_probs=126.4
Q ss_pred HHHHHhCCcEEEeccccCCCCChHHHHHH-HHHHhcccccccceeeeeecC------C-hhhHHHHHHHHHHc------C
Q 009410 131 QAAALAGGTTMHIDFVIPINGSLTAGFEA-YEKKAKNSCMDYGFHMAITKW------D-EVVSDEMEVMVKEK------G 196 (535)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~------g 196 (535)
.....+.|+-|++|+....-+.....+.. ..+.+-+.....|++.....+ . ++..+.+.+-+++. .
T Consensus 54 ~~~~~a~Gg~TIVD~T~~~~GRdv~~m~~vs~atglnIV~~TGfy~~~~~p~~~~~~~i~~~ae~~v~ei~~Gi~gT~ik 133 (316)
T COG1735 54 LKRLMARGGQTIVDATNIGIGRDVLKMRRVAEATGLNIVAATGFYKAAFHPEYFALRPIEELAEFVVKEIEEGIAGTGIK 133 (316)
T ss_pred HHHHHHcCCCeEeeCCccccCcCHHHHHHHHHHhCCcEEEeccccccccchhHHhhCCHHHHHHHHHHHHHhcccCCccc
Confidence 34457799999999975544423333333 333333333334443322111 1 22333333333221 3
Q ss_pred CCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHH
Q 009410 197 INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAI 276 (535)
Q Consensus 197 ~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 276 (535)
+..+|..-.+.+........++++..+.++-|.|+.+|.+......+.++.+.+.|+..
T Consensus 134 AGiIk~~~~~~~iTp~Eek~lrAaA~A~~~Tg~Pi~tHt~~gt~g~eq~~il~~egvdl--------------------- 192 (316)
T COG1735 134 AGIIKEAGGSPAITPLEEKSLRAAARAHKETGAPISTHTPAGTMGLEQLRILAEEGVDL--------------------- 192 (316)
T ss_pred cceeeeccCcccCCHHHHHHHHHHHHHhhhcCCCeEEeccchhhhHHHHHHHHHcCCCh---------------------
Confidence 55667655555433444566778888888889999999977655555566655555421
Q ss_pred HHHHhcCCCEEEEEcc-CHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCccc-HHHHHH
Q 009410 277 RLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGH-NKALQA 354 (535)
Q Consensus 277 ~~~~~~~~~~~~~H~~-~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~-~~~~~~ 354 (535)
.++.+.|+. +.+...-.+.++.+|+.+-....-- .+..|. ++ ...+.+
T Consensus 193 -------~~v~igH~d~n~dd~~y~~~l~~~Ga~l~fD~iG~-------------------d~y~pd----~~r~~~~~~ 242 (316)
T COG1735 193 -------RKVSIGHMDPNTDDVYYQKKLADRGAFLEFDRIGK-------------------DKYYPD----EDRIAPLLE 242 (316)
T ss_pred -------hHeeEeccCCCCChHHHHHHHHhcCceEEecccCc-------------------cccCcH----HHhhhhHHH
Confidence 257899998 6666677777888897765443311 111111 11 123555
Q ss_pred HHhcCCe--EEEeCCCCCCChhhhhcCCCCcccCcc-hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 355 ALATGIL--QLVGTDHCAFNSTQKAFGIDDFRKIPN-GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 355 ~l~~Gv~--~~lgtD~~~~~~~~~~~~~~~~~~~~~-g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
+.++|.. +.++-|......+.... ......++ |.-.-+...+-.+ +..|++.+++=++.--||+++|..
T Consensus 243 l~~~gy~d~i~ls~d~~~~~~~~~~~--~~~~~~~~~g~~~I~~~fIP~L-k~~Gvde~~i~~mlvdNP~r~f~~ 314 (316)
T COG1735 243 LVARGYADLILLSHDDICLSDDVFLK--SMLKANGGWGYGYILNDFIPRL-KRHGVDEETIDTMLVDNPARLFTA 314 (316)
T ss_pred HHHhhHhhheecccchhhhhhhHHHH--hhhhhcCCcccchhhHhhHHHH-HHcCCCHHHHHHHHhhCHHHHhcc
Confidence 6666644 55552322222221100 00011111 2222222333222 355799666666777999999975
No 134
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=97.72 E-value=0.0085 Score=59.63 Aligned_cols=148 Identities=13% Similarity=0.022 Sum_probs=85.3
Q ss_pred CCHHHHHHHHHHHHhcC--CeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEE
Q 009410 212 INDELLIEGFKRCKSLG--ALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (535)
Q Consensus 212 ~~~~~l~~~~~~a~~~g--~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (535)
.+...+..++..|++.| +++.+|+...... .......+..++.+ +.. .+.
T Consensus 176 ~~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~~-----------------------~~~~~~~v~~al~l----g~~-RIG 227 (345)
T cd01321 176 RPLLDFLPQLLWFPKQCAEIPFFFHAGETNGD-----------------------GTETDENLVDALLL----NTK-RIG 227 (345)
T ss_pred CCHHHHHHHHHHHHHhCCCCceEeecCCCcCC-----------------------CCCChhHHHHHHHh----CCC-cCc
Confidence 35788899999999999 9999999543200 00000112222222 111 244
Q ss_pred EccCH-HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCC
Q 009410 290 HVMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (535)
Q Consensus 290 H~~~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~ 368 (535)
|.... +..++++.++++++++..||+++...-.-.. ...-+++.++++|++++++||.
T Consensus 228 HG~~~~~dp~ll~~l~~~~I~lEvCPtSN~~~~~v~~---------------------~~~HPl~~ll~~Gv~vtinTDD 286 (345)
T cd01321 228 HGFALPKHPLLMDLVKKKNIAIEVCPISNQVLGLVSD---------------------LRNHPAAALLARGVPVVISSDD 286 (345)
T ss_pred cccccCcCHHHHHHHHHcCCeEEECcchhhhhccccc---------------------hhhChHHHHHHCCCeEEEeCCC
Confidence 44332 1227899999999999999997433111110 1123489999999999999997
Q ss_pred CCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCC---CCHHHHHHHHhHHHHHHcCC
Q 009410 369 CAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQ---ISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~---ls~~eal~~~T~~~A~~lgl 426 (535)
....... .+...+..+....+ ++.++.. ..+.|+.++-.+
T Consensus 287 p~~f~t~-----------------~l~~Ey~~~~~~~g~~~l~~~~l~-~l~~nsi~~sF~ 329 (345)
T cd01321 287 PGFWGAK-----------------GLSHDFYQAFMGLAPADAGLRGLK-QLAENSIRYSAL 329 (345)
T ss_pred cchhCCC-----------------CchHHHHHHHHHhccCCCCHHHHH-HHHHHHHHHHCC
Confidence 6532110 01111212333445 9988865 445666655544
No 135
>PTZ00124 adenosine deaminase; Provisional
Probab=97.66 E-value=0.0041 Score=62.03 Aligned_cols=140 Identities=12% Similarity=0.128 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCCh---hhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 215 ELLIEGFKRCKSLGALAMVHAENG---DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~~H~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
..+..+++.|++.|+++.+|+... .......+.+...| .. .+.|+
T Consensus 206 ~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~~~v~~ai~~l~-------------------------------~~-RIGHG 253 (362)
T PTZ00124 206 KPFKDIFDYVREAGVNLTVHAGEDVTLPNLNTLYSAIQVLK-------------------------------VK-RIGHG 253 (362)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCcchhHHHHHHHhC-------------------------------CC-ccccc
Confidence 568899999999999999999542 11111111111111 11 24555
Q ss_pred cCH-HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCC
Q 009410 292 MSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (535)
Q Consensus 292 ~~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~ 370 (535)
... ...+.++.++++++++..||+++...-.-. ....-+++.++++|++++++||...
T Consensus 254 ~~~~~d~~l~~~l~~~~I~lEvCPtSN~~~~~v~---------------------~~~~HPi~~l~~~Gv~v~InTDDp~ 312 (362)
T PTZ00124 254 IRVAESQELIDMVKEKDILLEVCPISNVLLNNAK---------------------SMDTHPIRKLYDAGVKVSVNSDDPG 312 (362)
T ss_pred cccCCCHHHHHHHHHcCCeEEECCcchhhhhcCC---------------------chhhHHHHHHHHCCCcEEEeCCCcc
Confidence 443 122789999999999999999743211100 0112458999999999999999765
Q ss_pred CChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 371 FNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
.... .+...+..+....|++.++..++ +.|+.+.-.+
T Consensus 313 ~~~t------------------~l~~Ey~~~~~~~gls~~~l~~l-~~nai~asF~ 349 (362)
T PTZ00124 313 MFLT------------------NINDDYEELYTHLNFTLADFMKM-NEWALEKSFL 349 (362)
T ss_pred ccCC------------------ChhHHHHHHHHHcCCCHHHHHHH-HHHHHHHhcC
Confidence 3221 12222333445678999998876 5555444333
No 136
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria.
Probab=97.66 E-value=0.00011 Score=59.92 Aligned_cols=80 Identities=21% Similarity=0.170 Sum_probs=53.7
Q ss_pred ecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHH----HHHHcCCCCcccccccCChhhHHHHHHHHHHHHH
Q 009410 205 AYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQK----RMIELGITGPEGHALSRPPLLEGEATTRAIRLAE 280 (535)
Q Consensus 205 ~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (535)
+.++...-....+.+.+.. .+.+..+..|++++.....+.- .-..+| ...+..+|...+.+.+.+++
T Consensus 56 sddg~giq~~~lm~eamk~-a~l~~~i~ahceDd~l~~~g~v~~ge~~q~~g--------~~L~G~cEs~~~~rd~lLak 126 (142)
T PF12890_consen 56 SDDGYGIQIQLLMYEAMKK-AELDQEIVAHCEDDELTNGGVVHDGELPQFLG--------VYLKGNCESVQCARDVLLAK 126 (142)
T ss_pred ecCCceeeeHHHHHHHHHH-HHcccHHHHhhcccccccccccccchhhHHhC--------CcCCCcchHHHHHHHHHhhh
Confidence 3344444456777778887 7889999999987754332221 111122 11344678888999999999
Q ss_pred hcCCCEEEEEccC
Q 009410 281 FVNTPLYVVHVMS 293 (535)
Q Consensus 281 ~~~~~~~~~H~~~ 293 (535)
..+.+.|+.|.++
T Consensus 127 ~~g~~yhVchvst 139 (142)
T PF12890_consen 127 ATGCHYHVCHVST 139 (142)
T ss_pred ccCCcEEEEEEec
Confidence 9999999999876
No 137
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=97.53 E-value=0.0071 Score=58.19 Aligned_cols=186 Identities=15% Similarity=0.095 Sum_probs=99.4
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
.++..+++.+.....|..++|++....+....+......+++.|.++|+++.+|+..........
T Consensus 83 ~~~~~~~l~~~~~~~g~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~H~g~~~~~~~~~--------------- 147 (273)
T PF04909_consen 83 PEDAVEELERALQELGFRGVKLHPDLGGFDPDDPRLDDPIFEAAEELGLPVLIHTGMTGFPDAPS--------------- 147 (273)
T ss_dssp HHHHHHHHHHHHHTTTESEEEEESSETTCCTTSGHCHHHHHHHHHHHT-EEEEEESHTHHHHHHH---------------
T ss_pred chhHHHHHHHhccccceeeeEecCCCCccccccHHHHHHHHHHHHhhccceeeeccccchhhhhH---------------
Confidence 34567777777778899999988766555444444446999999999999999975111000000
Q ss_pred ccCChhhHHHHHHHHHHHHHhc-CCCEEEEEccCH--HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcccccee
Q 009410 261 LSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSM--DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~~--~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (535)
.......+.++...+ +.++++.|+... ...+.+..+++. -++......... ..+
T Consensus 148 -------~~~~~~~~~~~~~~~P~l~ii~~H~G~~~~~~~~~~~l~~~~-~nvy~d~s~~~~---------------~~~ 204 (273)
T PF04909_consen 148 -------DPADPEELEELLERFPDLRIILAHLGGPFPWWEEALRLLDRF-PNVYVDLSGIPP---------------FWY 204 (273)
T ss_dssp -------HHHHHHHHTTHHHHSTTSEEEESGGGTTHHHHHHHHHHHHHH-TTEEEECHSHHS---------------SEE
T ss_pred -------HHHHHHHHHHHHHHhcCCeEEEecCcccchhHHHHHHHHHhC-Cccccccccccc---------------ccc
Confidence 012222333344444 688999999888 333444444433 234443321000 000
Q ss_pred EEcCCCCCcccHHHHHHHHhc-C-CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHH
Q 009410 338 VMSPPIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRL 415 (535)
Q Consensus 338 ~~~p~~r~~~~~~~~~~~l~~-G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~ 415 (535)
.. ........+..+++. | -++++|||.+.. .... ...... .......+|.++.=+.
T Consensus 205 -~~---~~~~~~~~l~~~~~~~g~drilfGSD~P~~-~~~~----------------~~~~~~-~~~~~~~l~~~~~~~i 262 (273)
T PF04909_consen 205 -FW---PPSFDRPFLRRAVDEFGPDRILFGSDYPHP-DGAS----------------PYEYIW-EAYFLDDLSEEEREKI 262 (273)
T ss_dssp -EE---TTHHCHHHHHHHHHHHTGGGEEEE--TTSS-THHH----------------HHHHHH-HHHHHHHSSHHHHHHH
T ss_pred -cC---cccccHHHHHHHHHHhCCceEEecCCCCCC-Cccc----------------cHHHHH-HhhhccCCCHHHHHHH
Confidence 00 001112334444443 2 469999995433 2211 111111 1111111799999999
Q ss_pred HhHHHHHHcCC
Q 009410 416 TSTECARIFNV 426 (535)
Q Consensus 416 ~T~~~A~~lgl 426 (535)
...|+++++|+
T Consensus 263 ~~~NA~rl~~l 273 (273)
T PF04909_consen 263 LYDNARRLYGL 273 (273)
T ss_dssp HTHHHHHHHTC
T ss_pred HhHhHHHHcCc
Confidence 99999999985
No 138
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=97.37 E-value=0.027 Score=55.24 Aligned_cols=141 Identities=11% Similarity=0.028 Sum_probs=85.0
Q ss_pred CHHHHHHHHHHHHhcC-CeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 213 NDELLIEGFKRCKSLG-ALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 213 ~~~~l~~~~~~a~~~g-~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
+...+...+..|++.| +++.+|+....... .+.+++... .-.+.|+
T Consensus 151 ~~~~f~~~~~~ar~~g~l~~t~HaGE~~~~~----------------------------~v~~~~~~~-----~~RIgHg 197 (305)
T cd00443 151 PLRDFYSYYEYARRLGLLGLTLHCGETGNRE----------------------------ELLQALLLL-----PDRIGHG 197 (305)
T ss_pred CHHHHHHHHHHHHHcCCcceEEeecCCCChH----------------------------HHHHHHHhc-----cceeece
Confidence 5788899999999999 99999996432211 122222221 1234555
Q ss_pred cCHH-HHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCC
Q 009410 292 MSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (535)
Q Consensus 292 ~~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~ 370 (535)
.... ..++++.+++.++++..||+++........+ ..-+++.++++|++++++||+..
T Consensus 198 ~~~~~~p~~~~~l~~~~i~ie~CP~SN~~~~~~~~~---------------------~~hP~~~~~~~G~~v~i~TDd~~ 256 (305)
T cd00443 198 IFLLKHPELIYLVKLRNIPIEVCPTSNVVLGTVQSY---------------------EKHPFMRFFKAGLPVSLSTDDPG 256 (305)
T ss_pred EecCCCHHHHHHHHHcCCEEEECcchhhhhcCCCCh---------------------hhChHHHHHHCCCeEEEeCCCCc
Confidence 4432 1267888999999999999874332211111 11238999999999999999764
Q ss_pred CChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 371 FNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
.... .+...+..+....+++.++..+.+ .|+-+.-.+
T Consensus 257 ~~~~------------------~l~~E~~~~~~~~~l~~~~l~~l~-~nsi~~sf~ 293 (305)
T cd00443 257 IFGT------------------SLSEEYSLAAKTFGLTFEDLCELN-RNSVLSSFA 293 (305)
T ss_pred ccCC------------------ChHHHHHHHHHHcCcCHHHHHHHH-HHHHHHhcC
Confidence 3221 111112223335569998876554 555444433
No 139
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=97.14 E-value=0.075 Score=50.97 Aligned_cols=123 Identities=18% Similarity=0.129 Sum_probs=67.8
Q ss_pred cccccccccccccCCCC--------chhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeee
Q 009410 106 GGIDPHTHLAMEFMGSE--------TIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMA 176 (535)
Q Consensus 106 GlID~H~H~~~~~~g~~--------~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (535)
|.||+|.|++..-.... ..-..+.....+-..||+..+-+...... .....++... ...+ +..+..
T Consensus 1 ~~iD~H~H~~~~~~~~~~~~~~~~~~~~~~e~l~~~m~~~gV~~aV~vq~~~~~~~n~~~~~~~~-~~~r-~~g~~~--- 75 (263)
T cd01311 1 GAVDAHMHVFDPGYPFPPAPEKFTPYDPGIDDLRALRSTLGIDRVVIVQASIYGADNSNLLDALA-SNGK-ARGGAT--- 75 (263)
T ss_pred CCEEeeeeeeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCcEEEeCccccCCchHHHHHHHh-hCCC-eEEEEE---
Confidence 67999999986511000 01112233444557898877644221111 1222233222 1111 111111
Q ss_pred eecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 177 ITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
..... ...++++++. ..|..++|+.....+.. +.+.+.++++.+.++|+++.+|+..
T Consensus 76 ~~p~~-~~~~~l~~~~-~~g~rGvRl~~~~~~~~--~~~~~~~~~~~~~~~gl~v~~~~~~ 132 (263)
T cd01311 76 VDPRT-TTDAELKEMH-DAGVRGVRFNFLFGGVD--NKDELDEIAKRAAELGWHVQVYFDA 132 (263)
T ss_pred ECCCC-CCHHHHHHHH-HCCCeEEEEecccCCCC--CHHHHHHHHHHHHHcCCEEEEEeCH
Confidence 11111 2346666664 78999999865443332 7788899999999999999999853
No 140
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=97.11 E-value=0.0094 Score=59.40 Aligned_cols=142 Identities=11% Similarity=0.049 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
....+..++..|++.|+++.+|+.+........+.+.. .+.. .+.|+.
T Consensus 178 ~~~~~~~~~~~a~~~gl~~t~HaGE~~~~~~~~~ai~~-------------------------------l~~~-RIgHG~ 225 (331)
T PF00962_consen 178 PPLKFAPAFRKAREAGLKLTVHAGETGGPEHIRDAILL-------------------------------LGAD-RIGHGV 225 (331)
T ss_dssp TGGGHHHHHHHHHHTT-EEEEEESSSSTHHHHHHHHHT-------------------------------ST-S-EEEE-G
T ss_pred chHHHHHHHhhhcccceeecceecccCCcccccchhhh-------------------------------ccce-eecchh
Confidence 34448889999999999999999655433322222211 1222 467776
Q ss_pred CHH-HHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCC
Q 009410 293 SMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (535)
Q Consensus 293 ~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~ 371 (535)
... ..++++.+++.++++..||+++...-.-..+ ..-+++.++++|++++++||....
T Consensus 226 ~~~~~p~l~~~~~~~~I~iEvcptSN~~~~~~~~~---------------------~~hP~~~~~~~gv~v~i~TDd~~~ 284 (331)
T PF00962_consen 226 RLIKDPELLELLAERQIPIEVCPTSNVQLGAVPSY---------------------EEHPLRKLLDAGVPVSINTDDPGV 284 (331)
T ss_dssp GGGGSHHHHHHHHHTT-EEEE-HHHHHHTTSSSTG---------------------GG-CHHHHHHTT-EEEE--BSHHH
T ss_pred hhhhhhHHHHHHHHhCCCeeeCCCcCcccceeeec---------------------chhHHHHHHHcCCceeccCCCccc
Confidence 432 2367888999999999999874432111111 112389999999999999996432
Q ss_pred ChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 372 NSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 372 ~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
.. +.+...+..+....++|.++.. ....|+.+.-.+
T Consensus 285 ~~------------------~~l~~ey~~~~~~~~l~~~~l~-~l~~nsi~~sf~ 320 (331)
T PF00962_consen 285 FG------------------TTLSDEYYLAAEAFGLSLADLK-QLARNSIEASFL 320 (331)
T ss_dssp HT-------------------SHHHHHHHHHHHHT--HHHHH-HHHHHHHHCSSS
T ss_pred cC------------------CCcHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHcC
Confidence 11 1122222233334479998854 455677665554
No 141
>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3.5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O ....
Probab=96.82 E-value=0.0034 Score=49.69 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=31.4
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCC
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNI 87 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~ 87 (535)
..|++|+|+.|+|..++..++|-|+||||+.||...
T Consensus 65 ~lD~VItNa~IiD~~GI~KADIGIkdG~I~gIGkAG 100 (121)
T PF00449_consen 65 ALDLVITNALIIDYTGIVKADIGIKDGRIVGIGKAG 100 (121)
T ss_dssp C-SEEEEEEEEEETTEEEEEEEEEETTEEEEEE-EB
T ss_pred cccEEEeCcEEEecCCcEEeeEEeeCCEEEEEeccC
Confidence 689999999999998888999999999999999743
No 142
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=96.76 E-value=0.16 Score=49.27 Aligned_cols=176 Identities=19% Similarity=0.162 Sum_probs=101.2
Q ss_pred hhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009410 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
+...+++++.+++.|..++++.....+. ..++..+..+++.|.++|+++.+|........ +.. .+ .
T Consensus 112 ~~a~~E~er~v~~~gf~g~~l~p~~~~~-~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~---------~~~---~~-~ 177 (293)
T COG2159 112 EAAAEELERRVRELGFVGVKLHPVAQGF-YPDDPRLYPIYEAAEELGVPVVIHTGAGPGGA---------GLE---KG-H 177 (293)
T ss_pred HHHHHHHHHHHHhcCceEEEecccccCC-CCCChHHHHHHHHHHHcCCCEEEEeCCCCCCc---------ccc---cC-C
Confidence 4467788888877889999885443332 33566689999999999999999985542110 000 00 0
Q ss_pred cCChhhHHHHHHHHHHHHHhc-CCCEEEEEcc--CHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeE
Q 009410 262 SRPPLLEGEATTRAIRLAEFV-NTPLYVVHVM--SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~--~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (535)
..| ..+-..+..+ ..++++.|+. .+-..+.+..+ ...-++...... ...+
T Consensus 178 ~~p--------~~~~~va~~fP~l~IVl~H~G~~~p~~~~a~~~a-~~~~nvy~d~s~------------------~~~~ 230 (293)
T COG2159 178 SDP--------LYLDDVARKFPELKIVLGHMGEDYPWELEAIELA-YAHPNVYLDTSG------------------VRPK 230 (293)
T ss_pred CCc--------hHHHHHHHHCCCCcEEEEecCCCCchhHHHHHHH-HhCCCceeeeec------------------cccc
Confidence 011 1122344455 7899999997 44332333333 333344433221 0011
Q ss_pred EcCCCCCcccHHHHHHHHh-cCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHh
Q 009410 339 MSPPIRASGHNKALQAALA-TGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTS 417 (535)
Q Consensus 339 ~~p~~r~~~~~~~~~~~l~-~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T 417 (535)
..++ .-+..+.+ -.-++.+|||.+...... .+. .....+++.+..-+..-
T Consensus 231 ~~~~-------~~~~~~~~~~~dkilFGSD~P~~~~~~-----------------~l~-----~~~~l~l~~e~k~kiL~ 281 (293)
T COG2159 231 YFAP-------PLLEFLKELGPDKILFGSDYPAIHPEV-----------------WLA-----ELDELGLSEEVKEKILG 281 (293)
T ss_pred cCCh-------HHHHHHHhcccCeEEecCCCCCcCHHH-----------------HHH-----HHHhcCCCHHHHHHHHH
Confidence 1111 12333444 246699999954432221 111 12255699988899999
Q ss_pred HHHHHHcCCC
Q 009410 418 TECARIFNVY 427 (535)
Q Consensus 418 ~~~A~~lgl~ 427 (535)
.|++++++++
T Consensus 282 ~NA~rll~l~ 291 (293)
T COG2159 282 ENAARLLGLD 291 (293)
T ss_pred HhHHHHhCcC
Confidence 9999999984
No 143
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=96.70 E-value=0.021 Score=56.05 Aligned_cols=144 Identities=15% Similarity=0.109 Sum_probs=85.1
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEE
Q 009410 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (535)
Q Consensus 211 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 290 (535)
...++.+..+++.++..|+.+.+|+..........+.+...+.. .+.|
T Consensus 181 ~~p~~~f~~~f~~~r~~gl~lt~HaGE~~~~~~i~~al~~~~~~--------------------------------rI~H 228 (345)
T COG1816 181 GYPPELFVSLFKLARDNGLKLTIHAGEAGGPESIRDALDLLGAE--------------------------------RIGH 228 (345)
T ss_pred cCCHHHHHHHHHHHHHcCceEEEeccccCCcHHHHHHHHHhchh--------------------------------hhcc
Confidence 34688999999999999999999996443332222222111110 1334
Q ss_pred ccCH-HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCC
Q 009410 291 VMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (535)
Q Consensus 291 ~~~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~ 369 (535)
..-. ...+++..+.+.++++..||.++-. .+. .+. -..-++++++++|+++++.||..
T Consensus 229 Gi~~~~d~~L~~~l~~~qI~levCP~SNi~-------------~~~----v~~----~~~hPf~~~~d~Gv~VsLnTDdp 287 (345)
T COG1816 229 GIRAIEDPELLYRLAERQIPLEVCPLSNIQ-------------LGV----VPS----LAKHPFKKLFDAGVKVSLNTDDP 287 (345)
T ss_pred ccccccCHHHHHHHHHhCCeeEECCcchhh-------------ccc----ccc----hhhCcHHHHHHcCCceEEcCCCh
Confidence 4321 1227788889999999999986321 110 000 11134999999999999999976
Q ss_pred CCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 370 AFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
..... |. ..+.. .++...+++..|+.+ .+.|+=+.-++
T Consensus 288 ~~f~~------------~l--~~Ey~----~aa~~~~l~~~dl~~-~arnav~~af~ 325 (345)
T COG1816 288 LYFGT------------PL--IEEYL----VAAQIYGLSREDLCE-LARNAVEAAFI 325 (345)
T ss_pred hhcCC------------ch--HHHHH----HHHHHhCCCHHHHHH-HHHHHHHHccC
Confidence 54221 11 11111 222344588888754 45555555444
No 144
>PF07908 D-aminoacyl_C: D-aminoacylase, C-terminal region; InterPro: IPR012855 D-aminoacylase (Q9AGH8 from SWISSPROT, 3.5.1.81 from EC) hydrolyses a wide variety of N-acyl derivatives of neutral D-amino acids, in a zinc-dependent manner. The enzyme is composed of a small beta-barrel domain and a larger catalytic alpha/beta-barrel that contains a short alpha/beta insert. The overall structure shares significant similarity to the alpha/beta-barrel amidohydrolase superfamily, in which the beta-strands in both barrels superimpose well []. The C-terminal region featured in this entry forms part of the beta-barrel domain, together with a short N-terminal segment. This domain does not seem to contribute to the substrate-binding site or to be involved in the catalytic process.; GO: 0008270 zinc ion binding, 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; PDB: 3GIQ_B 3GIP_B 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A.
Probab=96.27 E-value=0.0047 Score=41.67 Aligned_cols=30 Identities=17% Similarity=0.380 Sum_probs=19.8
Q ss_pred EEEEEEECCEEEEECCeecccCCCceEeecC
Q 009410 474 KVEVTIAGGRVVWENDELNVVPGSGKYIEMR 504 (535)
Q Consensus 474 ~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~ 504 (535)
=|.+|||||++++++|+++. ..+|+.|+++
T Consensus 19 GI~~V~VNG~~vv~~g~~t~-~~~G~~lrr~ 48 (48)
T PF07908_consen 19 GIDYVFVNGQIVVEDGEVTG-ARPGRVLRRP 48 (48)
T ss_dssp SEEEEEETTEEEECTTEESS-S----B----
T ss_pred CEEEEEECCEEEEECCeECC-CCCCeEecCC
Confidence 48999999999999999776 5589998863
No 145
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=95.90 E-value=0.96 Score=47.11 Aligned_cols=53 Identities=15% Similarity=0.105 Sum_probs=39.2
Q ss_pred HHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCC
Q 009410 298 EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (535)
Q Consensus 298 ~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~ 371 (535)
..++.++++++.+-.||+++...-.-.++. .-++..++++|++++|+||.+..
T Consensus 363 ~l~~~vke~~I~lEvCP~SN~~l~~v~~~~---------------------~HPl~~lla~Gvpv~InSDDP~~ 415 (479)
T TIGR01431 363 LVLQMLKERNIAVEVNPISNQVLQLVADLR---------------------NHPCAYLFADNYPMVISSDDPAF 415 (479)
T ss_pred HHHHHHHHhCCeEEECccchhhhcccCCcc---------------------cChHHHHHHCCCcEEEeCCCccc
Confidence 788899999999999999754422211111 13388999999999999997643
No 146
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]
Probab=95.50 E-value=0.59 Score=46.38 Aligned_cols=106 Identities=19% Similarity=0.144 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
+...+..++..+.+.|+...+|+.....-...++. ++++ .+.. .+.|..
T Consensus 225 p~~~f~~vl~~~~~~gi~~t~HaGE~~~~~~~v~~---------------------------~LD~---l~~~-RIGHG~ 273 (399)
T KOG1097|consen 225 PLSLFLEVLAKAPAKGIHLTFHAGETNGGASVVKN---------------------------ALDL---LGTE-RIGHGY 273 (399)
T ss_pred ChhhhHHHHHhhhhcCCcEEEEccccCCChHHHHH---------------------------HHHh---hCCc-cccCce
Confidence 45566666777777899999999544211122222 2220 1111 244443
Q ss_pred CH-HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCC
Q 009410 293 SM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (535)
Q Consensus 293 ~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~ 370 (535)
.. +...++.+++..++.+..||.++.....-.++ . .-++..++++|+++.|+||.+.
T Consensus 274 ~l~~dp~L~~~~k~~nI~lEiCP~SN~vl~~v~d~-----------r----------nhp~~~~~~~~vP~vI~sDDP~ 331 (399)
T KOG1097|consen 274 FLTKDPELINLLKSRNIALEICPISNQVLGLVSDL-----------R----------NHPVARLLAAGVPVVINSDDPG 331 (399)
T ss_pred eccCCHHHHHHHHhcCceEEEccchhhheeccccc-----------c----------ccHHHHHHhCCCCEEEeCCCcc
Confidence 22 11267888999999999999875442222111 1 1348899999999999999754
No 147
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=93.85 E-value=6.1 Score=37.51 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 214 DELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 214 ~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
.+.+++.++..+++|+.+..+....
T Consensus 123 a~~~r~~~~rL~~~gl~fdl~~~~~ 147 (279)
T COG3618 123 APAWRANVERLAKLGLHFDLQVDPH 147 (279)
T ss_pred hHHHHHHHHHHHhcCCeEEEEeChh
Confidence 3788999999999999998887544
No 148
>PRK08392 hypothetical protein; Provisional
Probab=93.51 E-value=6.2 Score=36.43 Aligned_cols=32 Identities=25% Similarity=0.193 Sum_probs=23.0
Q ss_pred cccccccccccCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 108 IDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 108 ID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
||.|+|...+ .|..+ .......+.+.|++.+.
T Consensus 1 ~D~H~HT~~s-d~~~~---~~e~v~~A~~~Gl~~i~ 32 (215)
T PRK08392 1 MDLHTHTVYS-DGIGS---VRDNIAEAERKGLRLVG 32 (215)
T ss_pred CccccCCCCc-CCcCC---HHHHHHHHHHcCCCEEE
Confidence 7999998776 23333 44447788899999775
No 149
>PRK08609 hypothetical protein; Provisional
Probab=92.42 E-value=8.4 Score=41.35 Aligned_cols=37 Identities=22% Similarity=0.151 Sum_probs=26.0
Q ss_pred Eeeccc-------ccccccccccCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 103 VMPGGI-------DPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 103 vlPGlI-------D~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
-+|=|| |.|+|.... .|..+ +....+.+.+.|++.+.
T Consensus 324 ~lp~lv~~~d~~~DlH~HT~~s-Dg~~s---leemv~~A~~~Gl~~i~ 367 (570)
T PRK08609 324 DLSNLITLSDIQGDLHMHTTWS-DGAFS---IEEMVEACIAKGYEYMA 367 (570)
T ss_pred hchhhhhhHhhcCCccccCCCC-CCCCC---HHHHHHHHHHCCCCEEE
Confidence 566664 999998755 23333 44457888899999887
No 150
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=91.22 E-value=3.2 Score=37.38 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=28.8
Q ss_pred cccccccccccc-CCCCchhhhHHHHHHHHhCCcEEEecc
Q 009410 107 GIDPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHIDF 145 (535)
Q Consensus 107 lID~H~H~~~~~-~g~~~~~~~~~~~~~~l~~GvTtv~d~ 145 (535)
+||.|+|+--.. .|..+.++-...++.+.+.|||+++-.
T Consensus 1 MIDIH~HIlp~iDDGp~s~eesl~ml~~A~~qGvt~iVaT 40 (254)
T COG4464 1 MIDIHSHILPDIDDGPKSLEESLAMLREAVRQGVTKIVAT 40 (254)
T ss_pred CccccccccCCCCCCCCcHHHHHHHHHHHHHcCceEEeec
Confidence 699999986552 244455555666788899999999854
No 151
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=90.51 E-value=15 Score=34.56 Aligned_cols=139 Identities=16% Similarity=0.153 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCC--CEEEEE
Q 009410 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT--PLYVVH 290 (535)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~H 290 (535)
..+.+..+++.|+..+.++..|.++... +...+.-+++.+.|. .-.+-|
T Consensus 143 ~n~vl~~a~elA~dvdc~vqLHtes~~~-----------------------------~~~~~i~~~ak~~G~~~~~VVkH 193 (285)
T COG1831 143 SNEVLEYAMELAKDVDCAVQLHTESLDE-----------------------------ETYEEIAEMAKEAGIKPYRVVKH 193 (285)
T ss_pred HHHHHHHHHHHhhcCCCcEEEecCCCCh-----------------------------HHHHHHHHHHHHhCCCcceeEee
Confidence 4567788899999999999999976532 223333344445553 123556
Q ss_pred ccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCC
Q 009410 291 VMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (535)
Q Consensus 291 ~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~ 370 (535)
...+.. ......| ++++.. ..+..+.++++.|-.+++-||..-
T Consensus 194 ha~p~v----~~~~~~G--i~pSV~-------------------------------asr~~v~~a~~~g~~FmmETDyID 236 (285)
T COG1831 194 HAPPLV----LKCEEVG--IFPSVP-------------------------------ASRKNVEDAAELGPRFMMETDYID 236 (285)
T ss_pred cCCccc----hhhhhcC--cCCccc-------------------------------ccHHHHHHHHhcCCceEeeccccc
Confidence 655432 1122234 222111 112468889999999999999643
Q ss_pred CChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 371 FNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
.... |-.-+|. -.++.-.+.+++.+.++.+.+.+..-.||.+.+|++
T Consensus 237 Dp~R-------pgavL~P---ktVPrr~~~i~~~g~~~ee~vy~i~~E~pe~VYg~~ 283 (285)
T COG1831 237 DPRR-------PGAVLGP---KTVPRRTREILEKGDLTEEDVYRIHVENPERVYGIE 283 (285)
T ss_pred Cccc-------CCCcCCc---cchhHHHHHHHHhcCCcHHHHHHHHHhCHHHHhCcc
Confidence 2221 1111111 124444446667888999999999999999999984
No 152
>PRK07945 hypothetical protein; Provisional
Probab=86.44 E-value=37 Score=33.77 Aligned_cols=40 Identities=23% Similarity=0.109 Sum_probs=26.9
Q ss_pred CCEEeec-ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 100 GKFVMPG-GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 100 G~~vlPG-lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
|..+.+- .+|.|+|...+ .|. ..+....+.+.+.|++.+.
T Consensus 89 g~~l~~~~~~D~H~HT~~S-dg~---~~~ee~v~~Ai~~Gl~~i~ 129 (335)
T PRK07945 89 GGALRAALRGDLHTHSDWS-DGG---SPIEEMARTAAALGHEYCA 129 (335)
T ss_pred cHHHHHHHhhhcccccCCC-CCC---CCHHHHHHHHHHCCCCEEE
Confidence 4434333 57999998876 233 3344558888999999876
No 153
>PRK06361 hypothetical protein; Provisional
Probab=86.12 E-value=9.7 Score=34.97 Aligned_cols=95 Identities=11% Similarity=0.068 Sum_probs=58.1
Q ss_pred EEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeC
Q 009410 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (535)
Q Consensus 287 ~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgt 366 (535)
++.|...... +.++.+++.|+.+-.+.... .......-+..+.+.|++++++|
T Consensus 116 vlaHpd~~~~-~~~~~~~~~~~~lEin~~~~--------------------------~~~~~~~~l~~a~~~gi~vv~~S 168 (212)
T PRK06361 116 ILAHPGLITE-EEAELAAENGVFLEITARKG--------------------------HSLTNGHVARIAREAGAPLVINT 168 (212)
T ss_pred EecCcchhhH-HHHHHHHHcCeEEEEECCCC--------------------------cccchHHHHHHHHHhCCcEEEEC
Confidence 4677765554 66777888886554332100 00011133455566799999999
Q ss_pred CCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 367 DHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
|... ... + . .+.. ...+....|++.++++.+.+.||+++++.
T Consensus 169 DaH~--~~d-------~-------~-~~~~-~~~i~~~~gl~~~~v~~~~~~~~~~~~~~ 210 (212)
T PRK06361 169 DTHA--PSD-------L-------I-TYEF-ARKVALGAGLTEKELEEALENNPKLLLKR 210 (212)
T ss_pred CCCC--HHH-------H-------H-HHHH-HHHHHcCCCCCHHHHHHHHHHhHHHHHHh
Confidence 9542 111 0 0 1222 22444678899999999999999999874
No 154
>KOG3020 consensus TatD-related DNase [Replication, recombination and repair]
Probab=85.60 E-value=36 Score=32.88 Aligned_cols=178 Identities=17% Similarity=0.167 Sum_probs=94.3
Q ss_pred EecCCCEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceee
Q 009410 96 LDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM 175 (535)
Q Consensus 96 ID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (535)
.|-.-...-|.+.|+|.|+... . ...+.......+...||...+.++.... .....++......+..+..+|.|.
T Consensus 7 ~d~~~~~~~~~~~~~~~~~~~~--~--~~~d~s~v~~~a~~~~v~~~~v~gt~~~-d~~~~~~l~~~y~~~v~~t~G~HP 81 (296)
T KOG3020|consen 7 LDDGRNFTNPMLEDIYCHIQAH--P--SDSDASQVLERAVQAGVSKLIVTGTSLK-DSKEALELAEKYPGSVYPTFGVHP 81 (296)
T ss_pred hhhhhhhcchhhchhhhccccC--C--CCccchHHHHHHHhccceEEEEeCCCcc-hHHHHHHHHhhCCCceeeccCcCC
Confidence 3444456667899999998765 2 2222223356778899999987765322 233444433332133444444443
Q ss_pred eeec-CCh-----hhHHHHHHHHHHcCC--C--EEEE-EeecCCCCcC----CHHHHHHHHHHHHhcCCeEEEEcCChhh
Q 009410 176 AITK-WDE-----VVSDEMEVMVKEKGI--N--SFKF-FMAYKGSFMI----NDELLIEGFKRCKSLGALAMVHAENGDA 240 (535)
Q Consensus 176 ~~~~-~~~-----~~~~~~~~~~~~~g~--~--~ik~-~~~~~~~~~~----~~~~l~~~~~~a~~~g~~v~~H~~~~~~ 240 (535)
-... +.. ...+.+..+++. +. . .+.. .+++...... -...+++-++.|.+..+|+.+|+....
T Consensus 82 ~~~~~~~~~~~~~~~~~~L~~~~~~-~~~~k~vAiGEcGLD~~r~~~~~~~~Qk~vFekQl~LA~~~~~Pl~iH~r~a~- 159 (296)
T KOG3020|consen 82 HFSQEFSDQSRKEKFLDTLLSIIEN-GFLPKVVAIGECGLDYDRLQFSDKEEQKTVFEKQLDLAKRLKLPLFIHCRSAH- 159 (296)
T ss_pred CcccchhhccchhhHHHHHHHHHhh-cccCCeEEeeccccccchhccCChHHHHHHHHHHHHHHHHccCCeeeechhhh-
Confidence 2211 111 245566666544 21 1 1111 1122211112 245578899999999999999996532
Q ss_pred HHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcE
Q 009410 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRV 310 (535)
Q Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v 310 (535)
.+..+.+.+.+ .+...+ .+.|+.+... +++..+.+.++.+
T Consensus 160 -~d~~eIl~~~~---------------------------~~~~~~-vvvHsFtGs~-e~~~~~lk~~~yi 199 (296)
T KOG3020|consen 160 -EDLLEILKRFL---------------------------PECHKK-VVVHSFTGSA-EEAQKLLKLGLYI 199 (296)
T ss_pred -HHHHHHHHHhc---------------------------cccCCc-eEEEeccCCH-HHHHHHHHccEEe
Confidence 22222222211 111112 4678888776 6777787787333
No 155
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=82.86 E-value=7.6 Score=40.49 Aligned_cols=91 Identities=9% Similarity=-0.010 Sum_probs=53.9
Q ss_pred HHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhh
Q 009410 298 EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKA 377 (535)
Q Consensus 298 ~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~ 377 (535)
.+...+...++++..||++....+ ..+. .-++..++++|++++|+||.+......+
T Consensus 363 ~L~~l~~~~qI~levCPlSN~~l~-------------~~~~----------~HP~~~~l~~Gl~VsInTDDPl~f~~t~- 418 (496)
T cd01319 363 VLQYLYYLTQIGIAMSPLSNNSLF-------------LSYE----------KNPFPEFFKRGLNVSLSTDDPLQFHFTK- 418 (496)
T ss_pred HHHHHHHHcCCeEEEecCccHhhh-------------cCcc----------cChHHHHHHCCCeEEEeCCCchhhCCCC-
Confidence 344455678999999998753211 1111 1338999999999999999754311100
Q ss_pred cCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 378 FGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 378 ~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
.. +...+..+....++|..+.. .++.|+.+.-+++
T Consensus 419 ----------~~----L~eEY~~a~~~~~Ls~~Dl~-eLarNSV~~Sf~~ 453 (496)
T cd01319 419 ----------EP----LMEEYSIAAQVWKLSTCDMC-ELARNSVLQSGFE 453 (496)
T ss_pred ----------Cc----HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHhCCC
Confidence 00 11122233345579988774 5567777766663
No 156
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=82.65 E-value=14 Score=39.54 Aligned_cols=91 Identities=13% Similarity=0.058 Sum_probs=54.4
Q ss_pred HHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhh
Q 009410 298 EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKA 377 (535)
Q Consensus 298 ~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~ 377 (535)
.+...+...++++.+||+++...+ ..+ ..-++..++++|++++++||.+......+
T Consensus 475 ~L~yl~~~~qI~LevCPtSN~~l~-------------~~y----------~~HP~~~~~~~Gl~VSLsTDDPl~f~~T~- 530 (611)
T TIGR01429 475 VLQYLYYLTQIPIAMSPLSNNSLF-------------LEY----------SKNPLPEYLHKGLNVSLSTDDPLQFHYTK- 530 (611)
T ss_pred HHHHHHHHcCCeEEEcCCcchhhc-------------cCh----------hhChHHHHHHCCCeEEEcCCCchhhCCCC-
Confidence 445556788999999999743110 111 11348999999999999999754311100
Q ss_pred cCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 378 FGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 378 ~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
..+...+..+.+..+++..+..++ ..|+.+.-+.+
T Consensus 531 --------------epL~EEY~~aa~~~~Ls~~Dl~eL-arNSV~~S~~~ 565 (611)
T TIGR01429 531 --------------EALMEEYAIAAQVWKLSTCDMCEL-ARNSVLQSGFE 565 (611)
T ss_pred --------------CcHHHHHHHHHHHhCCCHHHHHHH-HHHHHHHhCCC
Confidence 001122223334557999877654 66777666663
No 157
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=81.11 E-value=21 Score=35.60 Aligned_cols=113 Identities=17% Similarity=0.181 Sum_probs=69.1
Q ss_pred hHHHHHHHHHHcCCCEEEEEee-cC--C-CCcCCHHHHHHHHHHHHhcCCeEEEE------cCChhhHHHHHHHHHHcCC
Q 009410 184 VSDEMEVMVKEKGINSFKFFMA-YK--G-SFMINDELLIEGFKRCKSLGALAMVH------AENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~-~~--~-~~~~~~~~l~~~~~~a~~~g~~v~~H------~~~~~~~~~~~~~~~~~g~ 253 (535)
..+.+.... +.|++.+=+... +. . ....+.+.++++++.||++|.++.+= ..........++.+.+.|.
T Consensus 15 ~l~~l~~ai-~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gkk~~V~~N~~~~~~~~~~~~~~l~~l~e~Gv 93 (347)
T COG0826 15 NLEDLKAAI-AAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGKKVYVAVNTLLHNDELETLERYLDRLVELGV 93 (347)
T ss_pred CHHHHHHHH-HcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccccccchhhHHHHHHHHHHHcCC
Confidence 455666666 677776533211 11 1 12467888999999999999976443 3333445677788888887
Q ss_pred CCcccccccCChhhHHHHHHHHHHHHHhcC--CCEEEEEccCHHHHHHHHHHHHcCCc
Q 009410 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVN--TPLYVVHVMSMDAMEEIAKARKAGQR 309 (535)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~H~~~~~~~~~~~~~~~~g~~ 309 (535)
..+.. +-..++.++++.+ .++|..+..+....+.+..+++.|..
T Consensus 94 Daviv------------~Dpg~i~l~~e~~p~l~ih~S~q~~v~N~~~~~f~~~~G~~ 139 (347)
T COG0826 94 DAVIV------------ADPGLIMLARERGPDLPIHVSTQANVTNAETAKFWKELGAK 139 (347)
T ss_pred CEEEE------------cCHHHHHHHHHhCCCCcEEEeeeEecCCHHHHHHHHHcCCE
Confidence 76431 1223455556555 77777666555555666666666643
No 158
>PRK07328 histidinol-phosphatase; Provisional
Probab=80.60 E-value=55 Score=31.32 Aligned_cols=34 Identities=21% Similarity=-0.083 Sum_probs=23.8
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
++|.|+|.....-+..+ ++...+.|.+.|++++.
T Consensus 3 ~~D~H~HT~~s~~~~~~---~ee~v~~A~~~Gl~~i~ 36 (269)
T PRK07328 3 LVDYHMHTPLCGHAVGT---PEEYVQAARRAGLKEIG 36 (269)
T ss_pred ceeeccCCCCCCCCCCC---HHHHHHHHHHCCCCEEE
Confidence 47999998765223333 44457888899999876
No 159
>PLN03055 AMP deaminase; Provisional
Probab=80.24 E-value=9.8 Score=40.45 Aligned_cols=101 Identities=13% Similarity=0.080 Sum_probs=60.3
Q ss_pred EEEccCH-HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeC
Q 009410 288 VVHVMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (535)
Q Consensus 288 ~~H~~~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgt 366 (535)
+.|.... +...+..+++..++.+..||+++...+ ..+ ..-++..++++|+++.|+|
T Consensus 442 IgHGi~l~~dP~L~yl~~~~qI~LevCPlSN~~l~-------------~~y----------~~HP~~~~~~~Gl~VSInT 498 (602)
T PLN03055 442 IAHGNNLRKSPGLQYLYYLAQIGLAMSPLSNNSLF-------------LDY----------HRNPFPMFFARGLNVSLST 498 (602)
T ss_pred ecCccccCCCHHHHHHHHHcCCeEEEccCcchhhc-------------cch----------hhChHHHHHHCCCEEEEcC
Confidence 4455432 222667777888999999999753211 111 1234899999999999999
Q ss_pred CCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 367 DHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
|........+ ..+... +..+.+..++|..+.. .++.|+.+.-+++
T Consensus 499 DDPl~f~tT~-----------epL~eE----Y~~aa~~~~LS~~DL~-eLarNSV~~Sf~~ 543 (602)
T PLN03055 499 DDPLQIHLTK-----------EPLVEE----YSIAAQVWKLSSCDLC-EIARNSVLQSGFP 543 (602)
T ss_pred CCcchhcCCC-----------CcHHHH----HHHHHHHhCCCHHHHH-HHHHHHHHHhcCC
Confidence 9754311100 001112 2233335579988874 4577887777764
No 160
>PRK09248 putative hydrolase; Validated
Probab=79.11 E-value=57 Score=30.67 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=24.4
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
++|.|+|...+..+..+ +......+.+.|++++.
T Consensus 4 ~~D~H~HT~~s~~~~~~---~~e~v~~A~~~G~~~i~ 37 (246)
T PRK09248 4 PVDTHTHTIASGHAYST---LHENAAEAKQKGLKLFA 37 (246)
T ss_pred ceEeCcCCCCCCCCCCC---HHHHHHHHHHCCCCEEE
Confidence 68999998776223333 44447888899999886
No 161
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=78.01 E-value=82 Score=31.83 Aligned_cols=33 Identities=15% Similarity=0.057 Sum_probs=21.2
Q ss_pred HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHH
Q 009410 128 FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEK 162 (535)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~ 162 (535)
..-+..++++|.-|++|....++ +....+...+
T Consensus 80 ~~K~~~A~~~GADtiMDLStggd--l~~iR~~il~ 112 (431)
T PRK13352 80 LEKAKVAVKYGADTIMDLSTGGD--LDEIRRAIIE 112 (431)
T ss_pred HHHHHHHHHcCCCeEeeccCCCC--HHHHHHHHHH
Confidence 34466789999999999965543 3333334433
No 162
>PLN02768 AMP deaminase
Probab=72.85 E-value=15 Score=40.28 Aligned_cols=91 Identities=11% Similarity=0.039 Sum_probs=55.1
Q ss_pred HHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhh
Q 009410 298 EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKA 377 (535)
Q Consensus 298 ~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~ 377 (535)
.+..++...++++..||+++...+ ..+ ..-++..++++|+++.+.||........+.
T Consensus 686 ~LqyL~~l~qIgLevCPlSN~~l~-------------~~y----------~~HPf~~f~~~GL~VSLNTDDPL~fhtT~e 742 (835)
T PLN02768 686 VLQYLYYLAQIGLAMSPLSNNSLF-------------LDY----------HRNPFPMFFLRGLNVSLSTDDPLQIHLTKE 742 (835)
T ss_pred HHHHHHHHcCCeEEECCCcchhhh-------------cch----------hhChHHHHHHCCCEEEEcCCCccccCCCCC
Confidence 455566778999999998753111 111 123489999999999999997543211000
Q ss_pred cCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 378 FGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 378 ~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
.+...+..+.+..+++..+..++ +.|+...-+++
T Consensus 743 ---------------pL~EEYsvAak~~~LS~~DL~EL-arNSV~aSff~ 776 (835)
T PLN02768 743 ---------------PLVEEYSIAASVWKLSSCDLCEI-ARNSVYQSGFS 776 (835)
T ss_pred ---------------CHHHHHHHHHHHhCcCHHHHHHH-HHHHHHHhcCC
Confidence 01122223334557998877654 67777766663
No 163
>PTZ00310 AMP deaminase; Provisional
Probab=71.19 E-value=13 Score=43.51 Aligned_cols=52 Identities=10% Similarity=0.045 Sum_probs=35.5
Q ss_pred HHHHHH-HHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCC
Q 009410 298 EEIAKA-RKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (535)
Q Consensus 298 ~~~~~~-~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~ 371 (535)
..+..+ ...++++..||+++..... ..+ ..-++..++++|+++.+.||.+..
T Consensus 515 p~LqyL~~e~qI~LeVCPlSN~~l~v------------~sy----------~~HPi~~fl~~GL~VSLNTDDPl~ 567 (1453)
T PTZ00310 515 PVLQYLCGLHRVGLTVSPLRDHALSI------------TAY----------FDHPLPKFLHRCLRVSISTSDPLY 567 (1453)
T ss_pred HHHHHHHHHcCCeEEECCCcccccCC------------Cch----------hhCcHHHHHHCCCEEEECCCCccc
Confidence 444444 4889999999997543221 111 113489999999999999997553
No 164
>PRK01060 endonuclease IV; Provisional
Probab=70.76 E-value=72 Score=30.58 Aligned_cols=91 Identities=16% Similarity=0.132 Sum_probs=59.0
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCC---CcCCHHHHHHHHHHHHhcCCe---EEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSLGAL---AMVHAENGDAVFEGQKRMIELGITGPEG 258 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~a~~~g~~---v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (535)
.+.++. +++.|.+++-+++..+.. ...+++.++++.+.++++|+. +.+|...... +.+.
T Consensus 15 ~~~l~~-~~~~G~d~vEl~~~~p~~~~~~~~~~~~~~~lk~~~~~~gl~~~~~~~h~~~~~n------------l~~~-- 79 (281)
T PRK01060 15 EGAVAE-AAEIGANAFMIFTGNPQQWKRKPLEELNIEAFKAACEKYGISPEDILVHAPYLIN------------LGNP-- 79 (281)
T ss_pred HHHHHH-HHHcCCCEEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCCCCceEEecceEec------------CCCC--
Confidence 334444 448999999998764432 245788899999999999998 8888753200 0000
Q ss_pred ccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
...-.....+.+.+.++++...|.+....|..
T Consensus 80 --d~~~r~~s~~~~~~~i~~A~~lga~~vv~h~G 111 (281)
T PRK01060 80 --NKEILEKSRDFLIQEIERCAALGAKLLVFHPG 111 (281)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 00001122355788899999999998777765
No 165
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=70.41 E-value=62 Score=30.74 Aligned_cols=64 Identities=13% Similarity=0.091 Sum_probs=42.4
Q ss_pred hhhHHHHHHHHHHcCCCEEEEEee--cCCCCcCCHH-H---HHHHHHHHHhc-CCeEEEEcCChhhHHHHHH
Q 009410 182 EVVSDEMEVMVKEKGINSFKFFMA--YKGSFMINDE-L---LIEGFKRCKSL-GALAMVHAENGDAVFEGQK 246 (535)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~--~~~~~~~~~~-~---l~~~~~~a~~~-g~~v~~H~~~~~~~~~~~~ 246 (535)
++..+..+++. +.|++.+++-.. .++....+.+ + +..+++.+++. +.++++|...+..+...++
T Consensus 23 ~~~~~~a~~~~-~~GA~iIDIG~~st~p~~~~i~~~~E~~rl~~~v~~~~~~~~~plsiDT~~~~vi~~al~ 93 (257)
T TIGR01496 23 DKAVAHAERML-EEGADIIDVGGESTRPGADRVSPEEELNRVVPVIKALRDQPDVPISVDTYRAEVARAALE 93 (257)
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEeCCCHHHHHHHHH
Confidence 44556666666 789999998321 1222233333 3 77777888876 9999999988866655553
No 166
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=69.90 E-value=1.1e+02 Score=29.69 Aligned_cols=105 Identities=7% Similarity=-0.065 Sum_probs=69.1
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHH-HHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDEL-LIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~-l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+.+..+.+-+.+++.+...|--+ ..........+. ..-+...|++.+.||.+|........ .+...++.|++++-..
T Consensus 27 n~e~~~avi~AAee~~sPvIlq~-s~~~~~~~~~~~~~~~~~~~a~~~~VPValHLDHg~~~e-~i~~ai~~GFtSVM~D 104 (286)
T PRK12738 27 NAETIQAILEVCSEMRSPVILAG-TPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLD-DIRRKVHAGVRSAMID 104 (286)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEc-CcchhhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHH-HHHHHHHcCCCeEeec
Confidence 44556666666666666665321 111111123333 34455567788999999996665443 5555678899988777
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
....|.........+..+++...|..+-
T Consensus 105 gS~lp~eeNi~~T~evv~~Ah~~gv~VE 132 (286)
T PRK12738 105 GSHFPFAENVKLVKSVVDFCHSQDCSVE 132 (286)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 7777888888889999999998887654
No 167
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=69.54 E-value=1.2e+02 Score=31.93 Aligned_cols=125 Identities=12% Similarity=0.050 Sum_probs=66.4
Q ss_pred hHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEee
Q 009410 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (535)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (535)
.....+.+..+|+..++-.....+. +....++.....+......+.+... +..+.+..-++.+.+.+.|++.+.+- +
T Consensus 99 v~~fv~~a~~~Gidi~RIfd~lndv~nl~~ai~~vk~ag~~~~~~i~yt~s-p~~t~e~~~~~a~~l~~~Gad~I~Ik-D 176 (499)
T PRK12330 99 VDRFVEKSAENGMDVFRVFDALNDPRNLEHAMKAVKKVGKHAQGTICYTVS-PIHTVEGFVEQAKRLLDMGADSICIK-D 176 (499)
T ss_pred HHHHHHHHHHcCCCEEEEEecCChHHHHHHHHHHHHHhCCeEEEEEEEecC-CCCCHHHHHHHHHHHHHcCCCEEEeC-C
Confidence 3445677888999987733222211 3444444444444322122222221 12233333333333347899887552 2
Q ss_pred cCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCChhh-HHHHHHHHHHcCCCC
Q 009410 206 YKGSFMINDELLIEGFKRCKSL---GALAMVHAENGDA-VFEGQKRMIELGITG 255 (535)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~~~~-~~~~~~~~~~~g~~~ 255 (535)
..| .+++....+++...++. ++++..|+++... .....-...+.|...
T Consensus 177 taG--ll~P~~~~~LV~~Lk~~~~~~ipI~~H~Hnt~GlA~An~laAieAGad~ 228 (499)
T PRK12330 177 MAA--LLKPQPAYDIVKGIKEACGEDTRINLHCHSTTGVTLVSLMKAIEAGVDV 228 (499)
T ss_pred Ccc--CCCHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCcHHHHHHHHHHcCCCE
Confidence 222 35788888888888765 5899999966532 222233445566643
No 168
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=68.49 E-value=1.2e+02 Score=29.38 Aligned_cols=65 Identities=20% Similarity=0.258 Sum_probs=41.1
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (535)
.++..++.++.|++.+-+..+ |.+.+.++.+.++++-+ +.++|++.|-.+.-. .+.++.+...|+
T Consensus 158 peeA~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~L~~~~L~~I~~---~~~iPLVLHGgSG~~-~e~~~~ai~~Gi 227 (285)
T PRK07709 158 PAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRD---FTGVPLVLHGGTGIP-TADIEKAISLGT 227 (285)
T ss_pred HHHHHHHHHHhCCCEEEEeecccccCcCCCCccCHHHHHHHHH---HHCCCEEEeCCCCCC-HHHHHHHHHcCC
Confidence 455666676789998876554 33445677888887644 458999999754322 233444445554
No 169
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=68.06 E-value=1.3e+02 Score=32.38 Aligned_cols=124 Identities=13% Similarity=0.097 Sum_probs=67.5
Q ss_pred hHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEee
Q 009410 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (535)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (535)
++...+.+..+|+..++-.....+. +....++...+.+......+.+.. .+..+.+..-++.+.+.+.|++.+.+- +
T Consensus 98 v~~~v~~a~~~Gidv~Rifd~lnd~~n~~~~i~~~k~~G~~~~~~i~yt~-sp~~t~e~~~~~ak~l~~~Gad~I~Ik-D 175 (596)
T PRK14042 98 VRAFVKLAVNNGVDVFRVFDALNDARNLKVAIDAIKSHKKHAQGAICYTT-SPVHTLDNFLELGKKLAEMGCDSIAIK-D 175 (596)
T ss_pred HHHHHHHHHHcCCCEEEEcccCcchHHHHHHHHHHHHcCCEEEEEEEecC-CCCCCHHHHHHHHHHHHHcCCCEEEeC-C
Confidence 3445677899999988844322221 345555555555543222222222 122333333344433447898877552 3
Q ss_pred cCCCCcCCHHHHHHHHHHHHh-cCCeEEEEcCChhhHH-HHHHHHHHcCCC
Q 009410 206 YKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVF-EGQKRMIELGIT 254 (535)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~~~-~~~~~~~~~g~~ 254 (535)
..| .+++....+++...++ .++++..|+++..... ...-...+.|..
T Consensus 176 taG--~l~P~~v~~lv~alk~~~~ipi~~H~Hnt~Gla~an~laAieaGad 224 (596)
T PRK14042 176 MAG--LLTPTVTVELYAGLKQATGLPVHLHSHSTSGLASICHYEAVLAGCN 224 (596)
T ss_pred ccc--CCCHHHHHHHHHHHHhhcCCEEEEEeCCCCCcHHHHHHHHHHhCCC
Confidence 222 3578888888887765 4789999986653322 222334555654
No 170
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=67.83 E-value=1.6e+02 Score=30.71 Aligned_cols=125 Identities=12% Similarity=0.045 Sum_probs=66.3
Q ss_pred hHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEee
Q 009410 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (535)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (535)
++...+.+..+||..++-.....+. +....++.....+.......++.. .+..+.+..-++.+.+.+.|++.+-+- +
T Consensus 107 v~~fv~~a~~~Gidi~Rifd~lnd~~n~~~ai~~ak~~G~~~~~~i~yt~-sp~~t~~y~~~~a~~l~~~Gad~I~Ik-D 184 (468)
T PRK12581 107 VDKFISLSAQNGIDVFRIFDALNDPRNIQQALRAVKKTGKEAQLCIAYTT-SPVHTLNYYLSLVKELVEMGADSICIK-D 184 (468)
T ss_pred HHHHHHHHHHCCCCEEEEcccCCCHHHHHHHHHHHHHcCCEEEEEEEEEe-CCcCcHHHHHHHHHHHHHcCCCEEEEC-C
Confidence 3445677889999988844322222 445555555544433222222211 111222333333333337888887552 3
Q ss_pred cCCCCcCCHHHHHHHHHHHHhc-CCeEEEEcCChhh-HHHHHHHHHHcCCCC
Q 009410 206 YKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDA-VFEGQKRMIELGITG 255 (535)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~~~-~~~~~~~~~~~g~~~ 255 (535)
..| .++++...+++...++. ++++..|+++... .....-...+.|...
T Consensus 185 taG--~l~P~~v~~Lv~alk~~~~~pi~~H~Hnt~GlA~An~laAieAGad~ 234 (468)
T PRK12581 185 MAG--ILTPKAAKELVSGIKAMTNLPLIVHTHATSGISQMTYLAAVEAGADR 234 (468)
T ss_pred CCC--CcCHHHHHHHHHHHHhccCCeEEEEeCCCCccHHHHHHHHHHcCCCE
Confidence 222 35788888888877753 5888999865532 222333445667654
No 171
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=67.67 E-value=1.2e+02 Score=29.32 Aligned_cols=105 Identities=5% Similarity=-0.055 Sum_probs=69.7
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHH-HHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+.+..+.+-+.+++.+...+--. ..........+.+.. +...|++.+.|+.+|....... +.+...++.|++++-..
T Consensus 27 n~e~~~avi~AAee~~sPvIiq~-~~~~~~~~g~~~~~~~~~~~a~~~~VPValHLDH~~~~-e~i~~ai~~GftSVMiD 104 (284)
T PRK12737 27 NLETLQVVVETAAELRSPVILAG-TPGTFSYAGTDYIVAIAEVAARKYNIPLALHLDHHEDL-DDIKKKVRAGIRSVMID 104 (284)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEc-CccHHhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHcCCCeEEec
Confidence 34555666666656666655321 111111123444444 5567778899999999655433 45566778899988777
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
....|.........+..+++...|..+-
T Consensus 105 gS~lp~eeNi~~T~~vv~~Ah~~gvsVE 132 (284)
T PRK12737 105 GSHLSFEENIAIVKEVVEFCHRYDASVE 132 (284)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 7777888888889999999999887654
No 172
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=67.53 E-value=1.1e+02 Score=29.54 Aligned_cols=105 Identities=8% Similarity=-0.060 Sum_probs=68.5
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHH-HHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDE-LLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~-~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+.+..+.+-+.+++.+...+-.. ..........+ ...-+...|++...|+.+|....... +.+...++.|++++-..
T Consensus 27 n~e~~~avi~AAee~~sPvIiq~-~~~~~~~~g~~~~~~~~~~~A~~~~VPV~lHLDHg~~~-e~i~~Ai~~GftSVM~D 104 (284)
T PRK09195 27 NLETMQVVVETAAELHSPVIIAG-TPGTFSYAGTEYLLAIVSAAAKQYHHPLALHLDHHEKF-DDIAQKVRSGVRSVMID 104 (284)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEc-ChhHHhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHcCCCEEEeC
Confidence 34555566566656666655321 11111112333 34445557888899999999665543 55666778899988766
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
....|.........+..+++...|..+-
T Consensus 105 gS~l~~eeNi~~T~~vv~~Ah~~gv~VE 132 (284)
T PRK09195 105 GSHLPFAQNISLVKEVVDFCHRFDVSVE 132 (284)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 6677887788888999999999886654
No 173
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=67.41 E-value=1.2e+02 Score=29.36 Aligned_cols=65 Identities=23% Similarity=0.275 Sum_probs=40.2
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (535)
.++..++.++.|.|.+-+..+ |.+.+.++.+.++++-+. .++|++.|-.+.-. .+.++.+...|+
T Consensus 157 peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ldfd~l~~I~~~---~~vPLVLHGgSG~~-~e~~~kai~~GI 226 (286)
T PRK12738 157 PQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREV---VDVPLVLHGASDVP-DEFVRRTIELGV 226 (286)
T ss_pred HHHHHHHHHHhCCCEEEeccCcccCCCCCCCcCCHHHHHHHHHH---hCCCEEEeCCCCCC-HHHHHHHHHcCC
Confidence 455666676789998876654 233455677777777554 48999999754432 233344444454
No 174
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=67.35 E-value=1.4e+02 Score=30.23 Aligned_cols=124 Identities=15% Similarity=0.100 Sum_probs=63.9
Q ss_pred hHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhh-HHHHHHHHHHcCCCEEEEEe
Q 009410 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVV-SDEMEVMVKEKGINSFKFFM 204 (535)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~ik~~~ 204 (535)
++.....+..+|++.++-+-.-.+. +...+++.....+........+.... -.+-+. .+-.+++. +.|++.+-+-
T Consensus 100 Ve~Fv~ka~~nGidvfRiFDAlND~RNl~~ai~a~kk~G~h~q~~i~YT~sP-vHt~e~yv~~akel~-~~g~DSIciK- 176 (472)
T COG5016 100 VEKFVEKAAENGIDVFRIFDALNDVRNLKTAIKAAKKHGAHVQGTISYTTSP-VHTLEYYVELAKELL-EMGVDSICIK- 176 (472)
T ss_pred HHHHHHHHHhcCCcEEEechhccchhHHHHHHHHHHhcCceeEEEEEeccCC-cccHHHHHHHHHHHH-HcCCCEEEee-
Confidence 4455677889999988733212221 45555555555443221111111111 111222 23333444 7888877542
Q ss_pred ecCCCCcCCHHHHHHHHHHHHh-cCCeEEEEcCChhhHH-HHHHHHHHcCCCC
Q 009410 205 AYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVF-EGQKRMIELGITG 255 (535)
Q Consensus 205 ~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~~~-~~~~~~~~~g~~~ 255 (535)
+..| .+++....+++...++ .++++..|+.....+. ...-...+.|...
T Consensus 177 DmaG--lltP~~ayelVk~iK~~~~~pv~lHtH~TsG~a~m~ylkAvEAGvD~ 227 (472)
T COG5016 177 DMAG--LLTPYEAYELVKAIKKELPVPVELHTHATSGMAEMTYLKAVEAGVDG 227 (472)
T ss_pred cccc--cCChHHHHHHHHHHHHhcCCeeEEecccccchHHHHHHHHHHhCcch
Confidence 2222 3577777888887774 5888888885443322 2223344556543
No 175
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=66.39 E-value=1.5e+02 Score=29.89 Aligned_cols=33 Identities=15% Similarity=0.033 Sum_probs=21.3
Q ss_pred HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHH
Q 009410 128 FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEK 162 (535)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~ 162 (535)
..-+..++++|.-|++|....++ +...-+....
T Consensus 80 ~~K~~~A~~~GADtiMDLStGgd--l~~iR~~il~ 112 (423)
T TIGR00190 80 VEKALIAIKYGADTVMDLSTGGD--LDEIRKAILD 112 (423)
T ss_pred HHHHHHHHHcCCCeEeeccCCCC--HHHHHHHHHH
Confidence 34467789999999999965543 3333334433
No 176
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=65.98 E-value=1.3e+02 Score=29.01 Aligned_cols=105 Identities=5% Similarity=-0.031 Sum_probs=68.7
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHH-HHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLI-EGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~-~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+.+..+.+-+.+++.+...|--. ..........+.+. -+...|++.+.||.+|...... .+.+...++.|++++-..
T Consensus 25 n~e~~~avi~AAee~~sPvIlq~-s~~~~~~~~~~~~~~~~~~~a~~~~VPValHLDHg~~-~e~i~~ai~~GFtSVM~D 102 (282)
T TIGR01858 25 NLETIQAVVETAAEMRSPVILAG-TPGTFKHAGTEYIVALCSAASTTYNMPLALHLDHHES-LDDIRQKVHAGVRSAMID 102 (282)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEe-CccHHhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCC-HHHHHHHHHcCCCEEeec
Confidence 44555666666656666655322 11111112344444 4444677889999999965543 345667778899988777
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
....|.....+...++.+++...|..+-
T Consensus 103 gS~lp~eeNi~~T~~vv~~Ah~~gv~VE 130 (282)
T TIGR01858 103 GSHFPFAQNVKLVKEVVDFCHRQDCSVE 130 (282)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 7777888788888999999998887654
No 177
>PRK06801 hypothetical protein; Provisional
Probab=65.52 E-value=1.3e+02 Score=29.00 Aligned_cols=104 Identities=13% Similarity=0.013 Sum_probs=66.3
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHH-HHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDE-LLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~-~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+.+....+-+.+++.+...|--. ..........+ ...-+...|++...|+.+|....... +.++..++.|++++...
T Consensus 27 n~e~~~avi~AAe~~~~PvIl~~-~~~~~~~~~~~~~~~~~~~~a~~~~vpV~lHlDH~~~~-e~i~~Ai~~GftSVm~D 104 (286)
T PRK06801 27 DSHFLRALFAAAKQERSPFIINI-AEVHFKYISLESLVEAVKFEAARHDIPVVLNLDHGLHF-EAVVRALRLGFSSVMFD 104 (286)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEe-CcchhhcCCHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHhCCcEEEEc
Confidence 44556666666666666665322 11111113434 44555566778899999999665443 55666777899887655
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPL 286 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (535)
....|.........++.++++..+..+
T Consensus 105 ~S~l~~eeNi~~t~~v~~~a~~~gv~V 131 (286)
T PRK06801 105 GSTLEYEENVRQTREVVKMCHAVGVSV 131 (286)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 555666666677788888888888765
No 178
>PTZ00310 AMP deaminase; Provisional
Probab=65.16 E-value=26 Score=41.08 Aligned_cols=101 Identities=8% Similarity=0.061 Sum_probs=59.9
Q ss_pred EEEccCH-HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeC
Q 009410 288 VVHVMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (535)
Q Consensus 288 ~~H~~~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgt 366 (535)
+.|.... +...++.++...++++..||+++...+ ..+.. -++.+++++|+++.|+|
T Consensus 1135 IgHGi~l~~dp~L~yl~~l~qI~LevCPlSN~~l~-------------~sy~~----------hP~~~f~~~Gl~VSLnT 1191 (1453)
T PTZ00310 1135 ICHGINLRNDPPMQYLYYLAQIGLHVSPLSNNALF-------------LAFLE----------NPFPVFFHRGLNVSLST 1191 (1453)
T ss_pred ccchhhhCcCHHHHHHHHHcCCeEEECCCchHhhh-------------hchhh----------CcHHHHHHCCCEEEECC
Confidence 5565443 122555567778999999999753211 11111 23899999999999999
Q ss_pred CCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 367 DHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
|........+. -+...+..+....++|..+..+. ..|+...-|.+
T Consensus 1192 DDPl~f~tT~E---------------pL~eEYsiaa~~~~LS~~Dl~el-arNSV~~SGf~ 1236 (1453)
T PTZ00310 1192 DDPLMFHQTQE---------------PLIEEYSIAARVWGLSLNDLCEI-ARNSVLQSGFD 1236 (1453)
T ss_pred CCccccCCCcc---------------cHHHHHHHHHHHhCCCHHHHHHH-HHHHHHHcCCC
Confidence 97543221100 01112222333557998887654 67777777763
No 179
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=64.80 E-value=1.2e+02 Score=29.20 Aligned_cols=65 Identities=22% Similarity=0.321 Sum_probs=41.3
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (535)
.++..++.++.|+|.+-+..+ |.+.+.++.+.++++-+. .++|++.|-.+.-. .+.++.+...|+
T Consensus 157 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~p~Ld~~~L~~I~~~---~~vPLVLHGgSG~~-~e~~~~ai~~Gi 226 (284)
T PRK09195 157 PAQAREFVEATGIDSLAVAIGTAHGMYKGEPKLDFDRLENIRQW---VNIPLVLHGASGLP-TKDIQQTIKLGI 226 (284)
T ss_pred HHHHHHHHHHHCcCEEeeccCccccccCCCCcCCHHHHHHHHHH---hCCCeEEecCCCCC-HHHHHHHHHcCC
Confidence 455666676789998876554 334456788888888653 48999999754322 233444455554
No 180
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=63.39 E-value=1.4e+02 Score=28.61 Aligned_cols=65 Identities=26% Similarity=0.417 Sum_probs=40.7
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cCC-CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YKG-SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~-~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (535)
.++..++.++.|.+.+.+..+ |.+ .+.++.+.++++-+.. ++|++.|-.+.-. .+.++.+...|+
T Consensus 150 pe~a~~Fv~~TgvD~LAvsiGt~HG~Y~~~~p~L~~~~L~~i~~~~---~vPLVlHGgSG~~-~e~~~~ai~~Gi 220 (276)
T cd00947 150 PEEAEEFVEETGVDALAVAIGTSHGAYKGGEPKLDFDRLKEIAERV---NVPLVLHGGSGIP-DEQIRKAIKLGV 220 (276)
T ss_pred HHHHHHHHHHHCCCEEEeccCccccccCCCCCccCHHHHHHHHHHh---CCCEEEeCCCCCC-HHHHHHHHHcCC
Confidence 455666676779998876543 223 4567777777777665 7999999754432 223344444554
No 181
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=62.95 E-value=2.3e+02 Score=30.71 Aligned_cols=130 Identities=13% Similarity=0.092 Sum_probs=80.9
Q ss_pred CCchhhhHHHHHHHHhCCcEEEeccccCC--------CCChHHHHHHHHHHhcccccccce----eeeeecCChhhHHHH
Q 009410 121 SETIDDFFSGQAAALAGGTTMHIDFVIPI--------NGSLTAGFEAYEKKAKNSCMDYGF----HMAITKWDEVVSDEM 188 (535)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 188 (535)
....+++...+..+-+.|+.++=-.++.. ..+-++.++.+.+..++..+..-. ..+.....++..+..
T Consensus 22 r~~t~d~~~ia~~~d~~g~~siE~~gGatfd~~~rfl~edpwerl~~~r~~~pnt~lqmL~Rg~N~vGy~~~~d~vv~~~ 101 (596)
T PRK14042 22 RMRTEDMLPICNKMDDVGFWAMEVWGGATFDACLRFLKEDPWSRLRQLRQALPNTQLSMLLRGQNLLGYRNYADDVVRAF 101 (596)
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEeeCCcccceeecccCCCHHHHHHHHHHhCCCCceEEEeccccccccccCChHHHHHH
Confidence 45566666666666677777664322221 125577777777777665444332 233444555666666
Q ss_pred HHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEE-------cCChhhHHHHHHHHHHcCCCC
Q 009410 189 EVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH-------AENGDAVFEGQKRMIELGITG 255 (535)
Q Consensus 189 ~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-------~~~~~~~~~~~~~~~~~g~~~ 255 (535)
-+.+.+.|.+.+.+|-. .-+.+.++..++.+++.|..+.+- ..+.+...+..+.+.+.|...
T Consensus 102 v~~a~~~Gidv~Rifd~-----lnd~~n~~~~i~~~k~~G~~~~~~i~yt~sp~~t~e~~~~~ak~l~~~Gad~ 170 (596)
T PRK14042 102 VKLAVNNGVDVFRVFDA-----LNDARNLKVAIDAIKSHKKHAQGAICYTTSPVHTLDNFLELGKKLAEMGCDS 170 (596)
T ss_pred HHHHHHcCCCEEEEccc-----CcchHHHHHHHHHHHHcCCEEEEEEEecCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 56555889999988632 235788888999999999865543 244455556666777777654
No 182
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=62.05 E-value=23 Score=33.20 Aligned_cols=69 Identities=13% Similarity=0.054 Sum_probs=44.2
Q ss_pred HHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC-CC
Q 009410 351 ALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY-PR 429 (535)
Q Consensus 351 ~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~-~~ 429 (535)
.++...+.|+++.++||..... .. . .+.... .+.+..|++.++++.+.+.+|.+++..- .+
T Consensus 159 ~~~~~~~~g~piiisSdAh~~~-~l--------~--------~~~~~~-~l~~~~Gl~~~~~~~~~~~~~~~i~~~~~~~ 220 (237)
T PRK00912 159 NLALARKYDFPLVLTSGAMSCY-DL--------R--------SPREMI-ALAELFGMEEDEALKALSYYPESIIKKNRNR 220 (237)
T ss_pred HHHHHHhcCCCEEEeCCCCccc-cc--------C--------CHHHHH-HHHHHcCCCHHHHHHHHHHhHHHHHHhhccC
Confidence 3455566799999999953311 10 0 111111 3444678999999999999999998763 33
Q ss_pred CccccCCC
Q 009410 430 KGAILVGS 437 (535)
Q Consensus 430 ~GsI~~Gk 437 (535)
.+.|..|.
T Consensus 221 ~~~~~~~~ 228 (237)
T PRK00912 221 KNYVIEGV 228 (237)
T ss_pred CCcccccE
Confidence 45555554
No 183
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=60.23 E-value=1.7e+02 Score=28.31 Aligned_cols=65 Identities=29% Similarity=0.404 Sum_probs=40.5
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (535)
.++..++.++.|.+.+-+..+ |.+.+.++.+.++++-+. .++|++.|-.+.-. .+.++.+.+.|+
T Consensus 157 peeA~~Fv~~TgvD~LAvaiGt~HG~y~~~p~Ld~~~L~~I~~~---~~iPLVlHGgSG~~-~e~~~kai~~Gi 226 (284)
T PRK12737 157 PDAAAEFVERTGIDSLAVAIGTAHGLYKGEPKLDFERLAEIREK---VSIPLVLHGASGVP-DEDVKKAISLGI 226 (284)
T ss_pred HHHHHHHHHHhCCCEEeeccCccccccCCCCcCCHHHHHHHHHH---hCCCEEEeCCCCCC-HHHHHHHHHCCC
Confidence 355666676789998876554 334456778888877553 37999999754422 233444444454
No 184
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=59.13 E-value=1.7e+02 Score=28.16 Aligned_cols=107 Identities=13% Similarity=0.059 Sum_probs=66.7
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcC-CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI-NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~-~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+-+..+.+.+.+++.++..|--+-.....+.. ......-+...|+++++|+..|....... +......+.|+++.--.
T Consensus 27 nlE~~~AileaA~e~~sPvIiq~S~g~~~y~gg~~~~~~~v~~~a~~~~vPV~lHlDHg~~~-~~~~~ai~~GFsSvMiD 105 (286)
T COG0191 27 NLETLQAILEAAEEEKSPVIIQFSEGAAKYAGGADSLAHMVKALAEKYGVPVALHLDHGASF-EDCKQAIRAGFSSVMID 105 (286)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecccHHHHhchHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHhcCCceEEec
Confidence 34556666666656666665322111111222 24444556667788999999999655433 44455667788887655
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (535)
....|.........+.++++...|..+-.
T Consensus 106 gS~~~~eENi~~tkevv~~ah~~gvsVEa 134 (286)
T COG0191 106 GSHLPFEENIAITKEVVEFAHAYGVSVEA 134 (286)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 56667666667777888888888776654
No 185
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=58.58 E-value=1.8e+02 Score=28.10 Aligned_cols=65 Identities=25% Similarity=0.341 Sum_probs=41.2
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (535)
.++..++.++.|+|.+-+..+ |.+.+.++.+.++++-+ ..++|++.|-.+.-. .+.++.+...|+
T Consensus 155 peea~~Fv~~TgvD~LAvaiGt~HG~yk~~p~Ldf~~L~~I~~---~~~iPLVlHGgSG~~-~e~~~~ai~~Gi 224 (282)
T TIGR01858 155 PQEAKEFVEATGVDSLAVAIGTAHGLYKKTPKLDFDRLAEIRE---VVDVPLVLHGASDVP-DEDVRRTIELGI 224 (282)
T ss_pred HHHHHHHHHHHCcCEEecccCccccCcCCCCccCHHHHHHHHH---HhCCCeEEecCCCCC-HHHHHHHHHcCC
Confidence 355666676789998876554 33445678888888865 347999999754432 233444444554
No 186
>smart00518 AP2Ec AP endonuclease family 2. These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites
Probab=58.23 E-value=1.7e+02 Score=27.77 Aligned_cols=90 Identities=19% Similarity=0.136 Sum_probs=59.8
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCC---cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
..+.... +.|.+.+-++...+... ..+.+.+.++.+.++++|+++.+|...... +.+.. .
T Consensus 14 ~~~~~~~-~~G~~~vel~~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~ls~h~p~~~n------------l~s~d----~ 76 (273)
T smart00518 14 KAFIEAV-DIGARSFQLFLGNPRSWKGVRLSEETAEKFKEALKENNIDVSVHAPYLIN------------LASPD----K 76 (273)
T ss_pred HHHHHHH-HcCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCceec------------CCCCC----H
Confidence 4455555 78999998887655332 367888999999999999999999743100 00000 0
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
.-.....+.+.+.++++...|.+.+..|..
T Consensus 77 ~~r~~~~~~l~~~i~~A~~lGa~~vv~h~g 106 (273)
T smart00518 77 EKVEKSIERLIDEIKRCEELGIKALVFHPG 106 (273)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 001122355788999999999988777764
No 187
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=58.00 E-value=1.8e+02 Score=28.07 Aligned_cols=65 Identities=22% Similarity=0.279 Sum_probs=40.7
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (535)
.++..++.++.|++.+-+... |.+.+.++.+.++++-+ ..++|++.|-.+.-. .+.++.+...|+
T Consensus 158 peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~---~~~vPLVLHGgSG~~-~e~~~~ai~~GI 227 (286)
T PRK08610 158 PKECQELVEKTGIDALAPALGSVHGPYKGEPKLGFKEMEEIGL---STGLPLVLHGGTGIP-TKDIQKAIPFGT 227 (286)
T ss_pred HHHHHHHHHHHCCCEEEeeccccccccCCCCCCCHHHHHHHHH---HHCCCEEEeCCCCCC-HHHHHHHHHCCC
Confidence 455666676789998876553 33445667787777754 448999999754432 223444445554
No 188
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=57.99 E-value=1.8e+02 Score=28.12 Aligned_cols=104 Identities=13% Similarity=0.148 Sum_probs=66.5
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHH-HHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLI-EGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~-~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+-+..+.+-+.+++.+...+--. ..........+.+. -+...|++.+.|+.+|....... +.+...++.|++++--.
T Consensus 27 n~e~~~avi~AAe~~~sPvIl~~-~~~~~~~~g~~~~~~~~~~~A~~~~vPV~lHLDH~~~~-e~i~~Ai~~GftSVM~D 104 (283)
T PRK07998 27 NLETTISILNAIERSGLPNFIQI-APTNAQLSGYDYIYEIVKRHADKMDVPVSLHLDHGKTF-EDVKQAVRAGFTSVMID 104 (283)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEC-cHhHHhhCCHHHHHHHHHHHHHHCCCCEEEECcCCCCH-HHHHHHHHcCCCEEEEe
Confidence 33455555555555566555221 11111112344444 45567778899999999665443 44455678899887666
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPL 286 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (535)
....|.....+...+..+++...|..+
T Consensus 105 gS~l~~eeNi~~T~~vve~Ah~~gv~V 131 (283)
T PRK07998 105 GAALPFEENIAFTKEAVDFAKSYGVPV 131 (283)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 666777777788899999999999876
No 189
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=56.88 E-value=2.5e+02 Score=29.22 Aligned_cols=124 Identities=15% Similarity=0.076 Sum_probs=62.4
Q ss_pred HHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeec
Q 009410 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (535)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (535)
....+.++++|+..++-.....+. +....++.....+......+.+... +..+.+...++.+.+.+.|++.+.+- +.
T Consensus 99 ~~~v~~A~~~Gvd~irif~~lnd~~n~~~~v~~ak~~G~~v~~~i~~t~~-p~~~~~~~~~~a~~l~~~Gad~I~i~-Dt 176 (448)
T PRK12331 99 ESFVQKSVENGIDIIRIFDALNDVRNLETAVKATKKAGGHAQVAISYTTS-PVHTIDYFVKLAKEMQEMGADSICIK-DM 176 (448)
T ss_pred HHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCeEEEEEEeecC-CCCCHHHHHHHHHHHHHcCCCEEEEc-CC
Confidence 344567889999987744222221 2333333333333221111221111 12233333333333347899887552 32
Q ss_pred CCCCcCCHHHHHHHHHHHHh-cCCeEEEEcCChhh-HHHHHHHHHHcCCCC
Q 009410 207 KGSFMINDELLIEGFKRCKS-LGALAMVHAENGDA-VFEGQKRMIELGITG 255 (535)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~ 255 (535)
.| ..++....+++...++ .++++..|+++... .....-...+.|...
T Consensus 177 ~G--~l~P~~v~~lv~alk~~~~~pi~~H~Hnt~GlA~AN~laAieaGad~ 225 (448)
T PRK12331 177 AG--ILTPYVAYELVKRIKEAVTVPLEVHTHATSGIAEMTYLKAIEAGADI 225 (448)
T ss_pred CC--CCCHHHHHHHHHHHHHhcCCeEEEEecCCCCcHHHHHHHHHHcCCCE
Confidence 22 3567888888887764 47899999865532 222233445667643
No 190
>PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF. A mutation in one or more of these genes results in an increased copper sensitivity. Members of this family are between 200 and 300 amino acids in length and are found in both eukaryotes and bacteria.; GO: 0005507 copper ion binding, 0055070 copper ion homeostasis; PDB: 2BDQ_A 3IWP_I 1X8C_B 1X7I_A 1TWD_B.
Probab=54.69 E-value=1.7e+02 Score=26.64 Aligned_cols=82 Identities=21% Similarity=0.138 Sum_probs=46.3
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh--hhHHHHHHHHHHcCCCCcccccccCChhhHHHH
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG--DAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (535)
+.|++++-+-.-. ....++.+.++++++.|+ ++++..|-.-+ ....+.++.+.+.|+..+.-.....+.....+.
T Consensus 83 ~~GadG~VfG~L~-~dg~iD~~~~~~Li~~a~--~~~~tFHRAfD~~~d~~~al~~L~~lG~~rVLTSGg~~~a~~g~~~ 159 (201)
T PF03932_consen 83 ELGADGFVFGALT-EDGEIDEEALEELIEAAG--GMPVTFHRAFDEVPDPEEALEQLIELGFDRVLTSGGAPTALEGIEN 159 (201)
T ss_dssp HTT-SEEEE--BE-TTSSB-HHHHHHHHHHHT--TSEEEE-GGGGGSSTHHHHHHHHHHHT-SEEEESTTSSSTTTCHHH
T ss_pred HcCCCeeEEEeEC-CCCCcCHHHHHHHHHhcC--CCeEEEeCcHHHhCCHHHHHHHHHhcCCCEEECCCCCCCHHHHHHH
Confidence 7899988653211 123578999999999987 89999996222 335567777778887765432222233333344
Q ss_pred HHHHHHH
Q 009410 272 TTRAIRL 278 (535)
Q Consensus 272 ~~~~~~~ 278 (535)
+.++.+.
T Consensus 160 L~~lv~~ 166 (201)
T PF03932_consen 160 LKELVEQ 166 (201)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 191
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=54.36 E-value=2e+02 Score=27.48 Aligned_cols=120 Identities=13% Similarity=0.088 Sum_probs=65.6
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCCh--hhHHHHHHHHHHcCCCCcccc
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAENG--DAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~~--~~~~~~~~~~~~~g~~~~~~~ 259 (535)
.+.++.+. +.|++++-+..+......++.++..++++.+.+. .+++.+|+... ....+..+.+.+.|...+.-.
T Consensus 21 ~~~i~~l~-~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~gv~~~~~~~~i~~a~~a~~~Gad~v~v~ 99 (281)
T cd00408 21 RRLVEFLI-EAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIAGVGANSTREAIELARHAEEAGADGVLVV 99 (281)
T ss_pred HHHHHHHH-HcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEEEecCCccHHHHHHHHHHHHHcCCCEEEEC
Confidence 33344444 6788887554443344567888777777766543 57888888443 334455556677777654322
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
........+..-++....++...+.++.+.+..... ..+.+.++.+
T Consensus 100 pP~y~~~~~~~~~~~~~~ia~~~~~pi~iYn~P~~tg~~l~~~~~~~L~~ 149 (281)
T cd00408 100 PPYYNKPSQEGIVAHFKAVADASDLPVILYNIPGRTGVDLSPETIARLAE 149 (281)
T ss_pred CCcCCCCCHHHHHHHHHHHHhcCCCCEEEEECccccCCCCCHHHHHHHhc
Confidence 211111222222333334455567888887764321 2366666664
No 192
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=54.28 E-value=1.9e+02 Score=27.73 Aligned_cols=120 Identities=13% Similarity=0.043 Sum_probs=63.1
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccc
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
.+.++.+. +.|++++-+.-+......++.++.+++++.+.+. .+++.+++.. .....+..+.+.+.|...+.-.
T Consensus 24 ~~~i~~l~-~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~~~~~~~vi~gv~~~~~~~~~~~a~~a~~~G~d~v~~~ 102 (284)
T cd00950 24 ERLIEFQI-ENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEAVNGRVPVIAGTGSNNTAEAIELTKRAEKAGADAALVV 102 (284)
T ss_pred HHHHHHHH-HcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHHhCCCCcEEeccCCccHHHHHHHHHHHHHcCCCEEEEc
Confidence 33444444 6788887554333334567888877777766654 4677888743 3444555566677776643211
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
........+.+-+...-+++...+.++.+.+..... ..+.+.++.+
T Consensus 103 ~P~~~~~~~~~l~~~~~~ia~~~~~pi~lYn~P~~~g~~ls~~~~~~L~~ 152 (284)
T cd00950 103 TPYYNKPSQEGLYAHFKAIAEATDLPVILYNVPGRTGVNIEPETVLRLAE 152 (284)
T ss_pred ccccCCCCHHHHHHHHHHHHhcCCCCEEEEEChhHhCCCCCHHHHHHHhc
Confidence 111111112222233333445567888877764211 1355666654
No 193
>PRK08185 hypothetical protein; Provisional
Probab=54.19 E-value=2.1e+02 Score=27.61 Aligned_cols=105 Identities=15% Similarity=0.096 Sum_probs=67.2
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.+..+.+-+.+++.+...+--. ..........+...-+...|++...|+.+|....... +.+....+.|++++.-..
T Consensus 22 n~e~~~avi~AAee~~sPvIl~~-~~~~~~~~~~~~~~~~~~~a~~~~vPV~lHLDHg~~~-e~i~~ai~~Gf~SVM~D~ 99 (283)
T PRK08185 22 DSCFLRAVVEEAEANNAPAIIAI-HPNELDFLGDNFFAYVRERAKRSPVPFVIHLDHGATI-EDVMRAIRCGFTSVMIDG 99 (283)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEe-CcchhhhccHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHcCCCEEEEeC
Confidence 44556666666666777665322 1111111234455566678888999999999665443 345566677988766555
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
...|.........+..+++...+..+-
T Consensus 100 S~l~~eeNi~~t~~vv~~a~~~gv~vE 126 (283)
T PRK08185 100 SLLPYEENVALTKEVVELAHKVGVSVE 126 (283)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 556666666778888888888887653
No 194
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=54.03 E-value=2.1e+02 Score=27.61 Aligned_cols=105 Identities=10% Similarity=0.025 Sum_probs=67.9
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHH-HHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+.+..+.+-+.+++.+...|--. ..........+.+.. +...|++...|+.+|....... +.+...++.|++++--.
T Consensus 27 n~e~~~avi~AAee~~sPvIlq~-~~~~~~~~g~~~~~~~~~~~A~~~~VPValHLDH~~~~-e~i~~ai~~GftSVM~D 104 (284)
T PRK12857 27 NMEIVQAIVAAAEAEKSPVIIQA-SQGAIKYAGIEYISAMVRTAAEKASVPVALHLDHGTDF-EQVMKCIRNGFTSVMID 104 (284)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEe-chhHhhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHcCCCeEEEe
Confidence 33455555565656666555322 111111123444444 5667788899999999665443 34556677899888766
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
....|.....+...+..+++...|..+-
T Consensus 105 gS~lp~eeNi~~T~~vv~~Ah~~gvsVE 132 (284)
T PRK12857 105 GSKLPLEENIALTKKVVEIAHAVGVSVE 132 (284)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 6677887778888999999998887654
No 195
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=53.44 E-value=2.7e+02 Score=29.08 Aligned_cols=124 Identities=14% Similarity=0.033 Sum_probs=61.2
Q ss_pred HHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeec
Q 009410 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (535)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (535)
....+.++++|+..++-.....+. +....++.....+........+... +..+.+..-++.+.+.+.|++.+-+- +.
T Consensus 98 ~~fv~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t~~-p~~t~e~~~~~a~~l~~~Gad~I~i~-Dt 175 (467)
T PRK14041 98 ELFVKKVAEYGLDIIRIFDALNDIRNLEKSIEVAKKHGAHVQGAISYTVS-PVHTLEYYLEFARELVDMGVDSICIK-DM 175 (467)
T ss_pred HHHHHHHHHCCcCEEEEEEeCCHHHHHHHHHHHHHHCCCEEEEEEEeccC-CCCCHHHHHHHHHHHHHcCCCEEEEC-Cc
Confidence 334677889999977643222111 2333333333333221111111111 12223333333333347888887552 32
Q ss_pred CCCCcCCHHHHHHHHHHHHh-cCCeEEEEcCChhh-HHHHHHHHHHcCCCC
Q 009410 207 KGSFMINDELLIEGFKRCKS-LGALAMVHAENGDA-VFEGQKRMIELGITG 255 (535)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~ 255 (535)
.| .+++..+.+++...++ .++++..|+++... .....-...+.|...
T Consensus 176 ~G--~l~P~~v~~Lv~~lk~~~~vpI~~H~Hnt~GlA~AN~laAieaGad~ 224 (467)
T PRK14041 176 AG--LLTPKRAYELVKALKKKFGVPVEVHSHCTTGLASLAYLAAVEAGADM 224 (467)
T ss_pred cC--CcCHHHHHHHHHHHHHhcCCceEEEecCCCCcHHHHHHHHHHhCCCE
Confidence 22 3568888888887764 47889999865532 222223345566543
No 196
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=53.01 E-value=1.8e+02 Score=28.11 Aligned_cols=66 Identities=14% Similarity=0.168 Sum_probs=39.9
Q ss_pred HHHHHHHHHHcCCCEEEEEee-cCCC---CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-YKGS---FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (535)
.++..++.++.|++.+.+..+ .||. +.++.+.++++-+ ..++|++.|-.+.-.. +.++.....|+.
T Consensus 155 pe~a~~Fv~~TgvD~LAvaiGt~HG~Y~~p~l~~~~l~~I~~---~~~vPLVlHGgSG~~~-e~~~~ai~~Gi~ 224 (283)
T PRK07998 155 PEKVKDFVERTGCDMLAVSIGNVHGLEDIPRIDIPLLKRIAE---VSPVPLVIHGGSGIPP-EILRSFVNYKVA 224 (283)
T ss_pred HHHHHHHHHHhCcCeeehhccccccCCCCCCcCHHHHHHHHh---hCCCCEEEeCCCCCCH-HHHHHHHHcCCc
Confidence 455567777889999887553 2332 3456677776655 3589999997543222 223444555543
No 197
>COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
Probab=52.85 E-value=2e+02 Score=26.92 Aligned_cols=33 Identities=30% Similarity=0.353 Sum_probs=25.3
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
.+|.|+|...+ .|..++.++ .+.+...|...+.
T Consensus 2 ~~D~H~HT~~s-dg~~~~~e~---~~~A~~~g~~~~~ 34 (237)
T COG1387 2 KIDLHTHTVFS-DGEATPEEM---VEAAIELGLEYIA 34 (237)
T ss_pred CcccccCcccc-cCCCCHHHH---HHHHHHcCCeEEE
Confidence 47999998877 566666555 7778888988876
No 198
>PRK06740 histidinol-phosphatase; Validated
Probab=51.57 E-value=2.6e+02 Score=27.77 Aligned_cols=19 Identities=16% Similarity=0.081 Sum_probs=15.1
Q ss_pred HHHHHHhcCCeEEEeCCCC
Q 009410 351 ALQAALATGILQLVGTDHC 369 (535)
Q Consensus 351 ~~~~~l~~Gv~~~lgtD~~ 369 (535)
-+..+.+.|+++++|||..
T Consensus 276 il~~~~e~Gv~~tlgSDAH 294 (331)
T PRK06740 276 FLQVLAKHEVPITLSSDAH 294 (331)
T ss_pred HHHHHHHCCCeEEEeeCCC
Confidence 3566777899999999953
No 199
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=51.28 E-value=2.3e+02 Score=27.22 Aligned_cols=105 Identities=14% Similarity=0.054 Sum_probs=67.5
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHH-HHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+.+..+.+-+.+++.+...+--. ..........+.+..++ ..|++...|+.+|....... +.+...++.|++++--.
T Consensus 22 n~e~~~avi~AAe~~~sPvIi~~-~~~~~~~~~~~~~~~~~~~~a~~~~VPV~lHLDH~~~~-~~i~~ai~~GftSVMiD 99 (276)
T cd00947 22 NLETLKAILEAAEETRSPVILQI-SEGAIKYAGLELLVAMVKAAAERASVPVALHLDHGSSF-ELIKRAIRAGFSSVMID 99 (276)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEc-CcchhhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHhCCCEEEeC
Confidence 33455566666656666655322 11111112344444444 56777899999999665443 34455677899888766
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
....|.........+..++++..|..+-
T Consensus 100 ~S~l~~eeNi~~t~~vv~~ah~~gv~VE 127 (276)
T cd00947 100 GSHLPFEENVAKTKEVVELAHAYGVSVE 127 (276)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 6677888888888999999999887654
No 200
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=50.36 E-value=2.9e+02 Score=28.04 Aligned_cols=180 Identities=18% Similarity=0.114 Sum_probs=93.2
Q ss_pred chhhhHHHHHHHHhCCcEEEeccccCC--------CCChHHHHHHHHHHhcccccc----cceeeeeecCChhhHHHHHH
Q 009410 123 TIDDFFSGQAAALAGGTTMHIDFVIPI--------NGSLTAGFEAYEKKAKNSCMD----YGFHMAITKWDEVVSDEMEV 190 (535)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 190 (535)
..+++......+=+.|+++.--.++.. +++-+..++......++..+. .-...+.....++..+.+.+
T Consensus 26 rt~DmlPi~e~lD~~G~~slE~WGGATFDaciRfLnEDPWeRLr~lk~~~~nT~LQMLlRGQNlvGYrhyaDDvVe~Fv~ 105 (472)
T COG5016 26 RTEDMLPIAEALDKVGYWSLEVWGGATFDACIRFLNEDPWERLRELKKAVPNTKLQMLLRGQNLVGYRHYADDVVEKFVE 105 (472)
T ss_pred hHHhhHHHHHHHHhcCeeEEEecCCccHHHHHHHhcCCHHHHHHHHHHhCCCcHHHHHHccCccccccCCchHHHHHHHH
Confidence 445555555666678998774333221 113455555555555443222 11112233345566565555
Q ss_pred HHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEc-------CChhhHHHHHHHHHHcCCCCcc--cccc
Q 009410 191 MVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-------ENGDAVFEGQKRMIELGITGPE--GHAL 261 (535)
Q Consensus 191 ~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-------~~~~~~~~~~~~~~~~g~~~~~--~~~~ 261 (535)
...+.|.+.|.+|= ..-+...++..++.++++|..+.+-. .+.....+..+.+.+.|..++- .-..
T Consensus 106 ka~~nGidvfRiFD-----AlND~RNl~~ai~a~kk~G~h~q~~i~YT~sPvHt~e~yv~~akel~~~g~DSIciKDmaG 180 (472)
T COG5016 106 KAAENGIDVFRIFD-----ALNDVRNLKTAIKAAKKHGAHVQGTISYTTSPVHTLEYYVELAKELLEMGVDSICIKDMAG 180 (472)
T ss_pred HHHhcCCcEEEech-----hccchhHHHHHHHHHHhcCceeEEEEEeccCCcccHHHHHHHHHHHHHcCCCEEEeecccc
Confidence 55589999999872 23367889999999999998544332 2223333455567777776542 1111
Q ss_pred cCChhhHHHHHHHHHHH-HHhcCCCEEE-EEccCHHHHHHHHHHHHcCCcEE
Q 009410 262 SRPPLLEGEATTRAIRL-AEFVNTPLYV-VHVMSMDAMEEIAKARKAGQRVI 311 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~H~~~~~~~~~~~~~~~~g~~v~ 311 (535)
...+.. ..++++. -...+.++++ +|+.+.-+.-..-.+.+.|+..+
T Consensus 181 lltP~~----ayelVk~iK~~~~~pv~lHtH~TsG~a~m~ylkAvEAGvD~i 228 (472)
T COG5016 181 LLTPYE----AYELVKAIKKELPVPVELHTHATSGMAEMTYLKAVEAGVDGI 228 (472)
T ss_pred cCChHH----HHHHHHHHHHhcCCeeEEecccccchHHHHHHHHHHhCcchh
Confidence 111211 2222222 2344566543 45555433233334455676554
No 201
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=50.27 E-value=2.6e+02 Score=27.41 Aligned_cols=118 Identities=13% Similarity=0.061 Sum_probs=65.6
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. ..|++++-+.-+......++.++-+++++.+.+ .++++.+|+. +.....+..+.+.+.|.....-..
T Consensus 33 ~lv~~li-~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi~Gv~~~~t~~ai~~a~~A~~~Gad~vlv~~ 111 (309)
T cd00952 33 RLVERLI-AAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVFVGATTLNTRDTIARTRALLDLGADGTMLGR 111 (309)
T ss_pred HHHHHHH-HcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHHhCCCEEEECC
Confidence 3344444 678888765444444566788887777776553 3578888884 344555566667777776543221
Q ss_pred ccCChhhHHHHHHH-HHHHHHhc-CCCEEEEEccCHH----HHHHHHHHHH
Q 009410 261 LSRPPLLEGEATTR-AIRLAEFV-NTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 261 ~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
.......+ +.+.+ .-.++... +.++.+.|..... ..+.+.++.+
T Consensus 112 P~y~~~~~-~~l~~yf~~va~a~~~lPv~iYn~P~~tg~~l~~~~l~~L~~ 161 (309)
T cd00952 112 PMWLPLDV-DTAVQFYRDVAEAVPEMAIAIYANPEAFKFDFPRAAWAELAQ 161 (309)
T ss_pred CcCCCCCH-HHHHHHHHHHHHhCCCCcEEEEcCchhcCCCCCHHHHHHHhc
Confidence 11111122 33333 23344555 5788887765321 2366666653
No 202
>PTZ00372 endonuclease 4-like protein; Provisional
Probab=49.88 E-value=3e+02 Score=28.17 Aligned_cols=121 Identities=17% Similarity=0.164 Sum_probs=76.7
Q ss_pred hHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCC---CcCCHHHHHHHHHHHHhcCC
Q 009410 153 LTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSLGA 229 (535)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~a~~~g~ 229 (535)
.+..+...........+.+|.|..+.. .....+.+.. ..|+..+-+|...+.. ..++++...++.+.++++|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~iGaHvSiaG---G~~~a~~~a~-~~g~~afqiF~~npr~w~~~~~~~~~~~~f~~~~~~~gi 190 (413)
T PTZ00372 115 VDNAFNKIAELAEKSNVYIGAHVSASG---GVDNSPINAY-NIAGQAFALFLKNQRTWNSPPLSDETIDKFKENCKKYNY 190 (413)
T ss_pred hHHHHHHHHHHhhccCceEEEEEeccc---cHHHHHHHHH-HcCCCEEEEEcCCCccCCCCCCCHHHHHHHHHHHHHcCC
Confidence 444455555544555667777776543 2344555555 7899999999876533 34678999999999999977
Q ss_pred e---EEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccC
Q 009410 230 L---AMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (535)
Q Consensus 230 ~---v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 293 (535)
. +.+|+...-. +-++. ..-.....+.+.+.++.+...|.+.+..|..+
T Consensus 191 ~~~~i~~HapYlIN------------LASpd----~e~rekSv~~~~~eL~rA~~LGa~~VV~HPGs 241 (413)
T PTZ00372 191 DPKFILPHGSYLIN------------LANPD----KEKREKSYDAFLDDLQRCEQLGIKLYNFHPGS 241 (413)
T ss_pred CcceEEeecCceec------------CCCCC----HHHHHHHHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 4 7889865310 00000 00001123557788888999999988888765
No 203
>PRK05835 fructose-bisphosphate aldolase; Provisional
Probab=49.24 E-value=2.7e+02 Score=27.29 Aligned_cols=51 Identities=22% Similarity=0.239 Sum_probs=34.3
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cC--CCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YK--GSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~--~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
.++..++.++.|++.+-+... |. +.+.++.+.|+++-+ ..++|++.|-.+.
T Consensus 157 PeeA~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~L~f~~L~~I~~---~~~iPLVLHGgSG 214 (307)
T PRK05835 157 PKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKR---LTNIPLVLHGASA 214 (307)
T ss_pred HHHHHHHHHhhCCCEEEEccCccccccCCCCCCccCHHHHHHHHH---HhCCCEEEeCCCC
Confidence 455666676789998876554 22 344577788877744 4489999997443
No 204
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=49.02 E-value=2.5e+02 Score=27.58 Aligned_cols=28 Identities=7% Similarity=-0.115 Sum_probs=21.9
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChh
Q 009410 212 INDELLIEGFKRCKSLGALAMVHAENGD 239 (535)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~ 239 (535)
.+.+...++.+.|++.|+.+..-.-+..
T Consensus 87 ~p~e~~~~Lke~a~~~Gi~~~SSPfd~~ 114 (347)
T COG2089 87 TPLEWHAQLKEYARKRGIIFFSSPFDLT 114 (347)
T ss_pred CCHHHHHHHHHHHHHcCeEEEecCCCHH
Confidence 4678888999999999998876655443
No 205
>PRK07329 hypothetical protein; Provisional
Probab=48.43 E-value=2.4e+02 Score=26.52 Aligned_cols=20 Identities=20% Similarity=0.145 Sum_probs=15.0
Q ss_pred HHHHHHhcCCe-EEEeCCCCC
Q 009410 351 ALQAALATGIL-QLVGTDHCA 370 (535)
Q Consensus 351 ~~~~~l~~Gv~-~~lgtD~~~ 370 (535)
.+..+.+.|++ +.+|||...
T Consensus 200 ~l~~~~~~g~~~i~~gSDAH~ 220 (246)
T PRK07329 200 AIELYKQLGGKLFSIGSDAHK 220 (246)
T ss_pred HHHHHHHcCCeEEEecCCCCC
Confidence 36677788875 999999543
No 206
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=47.66 E-value=2.7e+02 Score=26.90 Aligned_cols=119 Identities=12% Similarity=0.043 Sum_probs=63.6
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+. ..++.+|+.. .....+..+.+.+.|...+.-..
T Consensus 26 ~~i~~l~-~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~~~~~~~vi~gv~~~~~~~~i~~a~~a~~~G~d~v~~~p 104 (292)
T PRK03170 26 KLVDYLI-ANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEAVNGRVPVIAGTGSNSTAEAIELTKFAEKAGADGALVVT 104 (292)
T ss_pred HHHHHHH-HcCCCEEEECCcCCccccCCHHHHHHHHHHHHHHhCCCCcEEeecCCchHHHHHHHHHHHHHcCCCEEEECC
Confidence 3344444 6788887554333334567877777777655543 4678888743 34445555666777765433211
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
.......+..-+...-+++...+.++.+.+..... ..+.+.++.+
T Consensus 105 P~~~~~~~~~i~~~~~~ia~~~~~pv~lYn~P~~~g~~l~~~~~~~L~~ 153 (292)
T PRK03170 105 PYYNKPTQEGLYQHFKAIAEATDLPIILYNVPGRTGVDILPETVARLAE 153 (292)
T ss_pred CcCCCCCHHHHHHHHHHHHhcCCCCEEEEECccccCCCCCHHHHHHHHc
Confidence 11111122222333334455567888887764211 1366666643
No 207
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=45.91 E-value=2.9e+02 Score=26.70 Aligned_cols=110 Identities=15% Similarity=-0.001 Sum_probs=67.2
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHH-HHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELL-IEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l-~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+.+..+.+-+.+++.+...+--. ..........+.+ .-+...|++...|+.+|....... +.++..++.|.+++.-.
T Consensus 27 n~e~~~avi~aAe~~~~Pvii~~-~~~~~~~~~~~~~~~~~~~~a~~~~vpv~lHlDH~~~~-e~i~~Al~~G~tsVm~d 104 (281)
T PRK06806 27 NMEMVMGAIKAAEELNSPIILQI-AEVRLNHSPLHLIGPLMVAAAKQAKVPVAVHFDHGMTF-EKIKEALEIGFTSVMFD 104 (281)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEc-CcchhccCChHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHcCCCEEEEc
Confidence 44555666666656666655321 1111111233333 345567788899999999665433 45666778898887655
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEE--EEEcc
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLY--VVHVM 292 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~H~~ 292 (535)
....+.........++.++++..|.++- +.|..
T Consensus 105 ~s~~~~~eni~~t~~v~~~a~~~gv~veaE~ghlG 139 (281)
T PRK06806 105 GSHLPLEENIQKTKEIVELAKQYGATVEAEIGRVG 139 (281)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeEC
Confidence 5555666666677788888988887654 34554
No 208
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=45.71 E-value=2.8e+02 Score=26.59 Aligned_cols=113 Identities=12% Similarity=-0.024 Sum_probs=57.8
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHHHHc
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMVKEK 195 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 195 (535)
+..+.+.+......++..||..+.-++..+.. +..+..+..........-......+....+ .+..+.. +.+++.
T Consensus 16 g~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~~~~~~~vi~gv~~~~~~~~~~~a-~~a~~~ 94 (284)
T cd00950 16 GSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEAVNGRVPVIAGTGSNNTAEAIELT-KRAEKA 94 (284)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHHhCCCCcEEeccCCccHHHHHHHH-HHHHHc
Confidence 45566777777788889999998855433332 222222222221111111223333333333 3333333 444478
Q ss_pred CCCEEEEEeecCCCCcCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009410 196 GINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H~ 235 (535)
|++.+-+..-+ ....+++.+.+.++. +...++++..+-
T Consensus 95 G~d~v~~~~P~--~~~~~~~~l~~~~~~ia~~~~~pi~lYn 133 (284)
T cd00950 95 GADAALVVTPY--YNKPSQEGLYAHFKAIAEATDLPVILYN 133 (284)
T ss_pred CCCEEEEcccc--cCCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99988664322 223355555444443 445688888774
No 209
>PF15581 Imm35: Immunity protein 35
Probab=45.38 E-value=98 Score=23.56 Aligned_cols=49 Identities=20% Similarity=0.279 Sum_probs=35.8
Q ss_pred cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCE
Q 009410 404 SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGR 483 (535)
Q Consensus 404 ~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr 483 (535)
..||+.+|+++..-.-+|+-- -+++..-|.-|+|.+| .|+.-|.+||
T Consensus 43 WRGl~~~qV~~kl~ava~~~~-----~~~~vvKkE~~~Iwfd----------------------------~VrF~f~~Gr 89 (93)
T PF15581_consen 43 WRGLPEEQVLYKLEAVAAKGP-----EAKIVVKKEGNIIWFD----------------------------EVRFNFDEGR 89 (93)
T ss_pred HcCCCHHHHHHHHHHHHhcCC-----CcceEEEecCCeEEEc----------------------------ceeEEeccce
Confidence 568999999998876666532 3556666677777776 6777788888
Q ss_pred EE
Q 009410 484 VV 485 (535)
Q Consensus 484 ~V 485 (535)
++
T Consensus 90 L~ 91 (93)
T PF15581_consen 90 LV 91 (93)
T ss_pred Ee
Confidence 76
No 210
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=44.92 E-value=1.7e+02 Score=23.71 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=26.1
Q ss_pred HHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChh
Q 009410 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (535)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~ 239 (535)
+.+++.|...+-+=+. ...++.+.+.++.+.-.....|+.+||....
T Consensus 51 ~~a~~~Gl~y~~iPv~---~~~~~~~~v~~f~~~l~~~~~Pvl~hC~sG~ 97 (110)
T PF04273_consen 51 AAAEALGLQYVHIPVD---GGAITEEDVEAFADALESLPKPVLAHCRSGT 97 (110)
T ss_dssp HHHHHCT-EEEE-------TTT--HHHHHHHHHHHHTTTTSEEEE-SCSH
T ss_pred HHHHHcCCeEEEeecC---CCCCCHHHHHHHHHHHHhCCCCEEEECCCCh
Confidence 3344556555433222 2235778888888777777889999996653
No 211
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=44.60 E-value=3e+02 Score=26.60 Aligned_cols=65 Identities=22% Similarity=0.378 Sum_probs=40.4
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (535)
.++..++.++.|++.+-+..+ |.+.+.++.+.++++-+. .++|++.|-.+.-. .+.++.+.+.|+
T Consensus 157 pe~a~~Fv~~TgvD~LAvaiGt~HG~y~~~p~Ld~~~L~~i~~~---~~vPLVlHGgSG~~-~e~~~~ai~~Gi 226 (284)
T PRK12857 157 PEEARRFVEETGVDALAIAIGTAHGPYKGEPKLDFDRLAKIKEL---VNIPIVLHGSSGVP-DEAIRKAISLGV 226 (284)
T ss_pred HHHHHHHHHHHCCCEEeeccCccccccCCCCcCCHHHHHHHHHH---hCCCEEEeCCCCCC-HHHHHHHHHcCC
Confidence 455666666789998876554 334456788888888654 47999999754322 223334444444
No 212
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=44.40 E-value=2.9e+02 Score=26.39 Aligned_cols=111 Identities=10% Similarity=0.009 Sum_probs=58.1
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChH---HHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (535)
|..+.+.+......++..||..+.-.+..+.. +.. +.++...+... -......+....+.+...++.+.++
T Consensus 13 g~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~---~~~~vi~gv~~~~~~~~i~~a~~a~ 89 (281)
T cd00408 13 GEVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVA---GRVPVIAGVGANSTREAIELARHAE 89 (281)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhC---CCCeEEEecCCccHHHHHHHHHHHH
Confidence 45566777777888889999988755443332 222 22222222221 1223333333333222233334444
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHH-HHHHhcCCeEEEEc
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (535)
+.|++.+-+..-+. ...+++.+.+.+ +.+...++++.++-
T Consensus 90 ~~Gad~v~v~pP~y--~~~~~~~~~~~~~~ia~~~~~pi~iYn 130 (281)
T cd00408 90 EAGADGVLVVPPYY--NKPSQEGIVAHFKAVADASDLPVILYN 130 (281)
T ss_pred HcCCCEEEECCCcC--CCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 78999987643322 224555554443 34444678888774
No 213
>TIGR00167 cbbA ketose-bisphosphate aldolases. fructose-bisphosphate and tagatose-bisphosphate aldolase.
Probab=44.02 E-value=3.1e+02 Score=26.58 Aligned_cols=105 Identities=10% Similarity=0.039 Sum_probs=67.8
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCc-CCHHHHHHH-HHHHHhc--CCeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFM-INDELLIEG-FKRCKSL--GALAMVHAENGDAVFEGQKRMIELGITGP 256 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~-~~~~~l~~~-~~~a~~~--g~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (535)
+.+..+.+-+.+++.+...+--. ....... ...+.+..+ ...|++. ..|+.+|....... +.+...++.|++++
T Consensus 27 n~e~~~avi~AAee~~sPvIlq~-~~~~~~~~~g~~~~~~~~~~~a~~~~~~VPV~lHLDHg~~~-e~i~~ai~~GftSV 104 (288)
T TIGR00167 27 NLETINAVLEAAAEEKSPVIIQF-SNGAAKYIAGLGAISAMVKAMSEAYPYGVPVALHLDHGASE-EDCAQAVKAGFSSV 104 (288)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEC-CcchhhccCCHHHHHHHHHHHHHhccCCCcEEEECCCCCCH-HHHHHHHHcCCCEE
Confidence 44556666666656666665321 1111111 234545444 4456667 78999999665543 44556667899988
Q ss_pred ccccccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
-......|.........+..+++...|..+-
T Consensus 105 MiDgS~lp~eeNi~~T~~vv~~Ah~~gv~VE 135 (288)
T TIGR00167 105 MIDGSHEPFEENIELTKKVVERAHKMGVSVE 135 (288)
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 7666677877777888899999998887664
No 214
>PRK09282 pyruvate carboxylase subunit B; Validated
Probab=43.87 E-value=4.2e+02 Score=28.70 Aligned_cols=161 Identities=11% Similarity=-0.034 Sum_probs=0.0
Q ss_pred CCchhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCE
Q 009410 121 SETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (535)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 199 (535)
....+-.....+.+.++|+..++-.....+. +....++.....+........+........+...+..+++. +.|++.
T Consensus 92 ~ypd~vv~~~v~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t~~p~~t~~~~~~~a~~l~-~~Gad~ 170 (592)
T PRK09282 92 HYPDDVVEKFVEKAAENGIDIFRIFDALNDVRNMEVAIKAAKKAGAHVQGTISYTTSPVHTIEKYVELAKELE-EMGCDS 170 (592)
T ss_pred cccchhhHHHHHHHHHCCCCEEEEEEecChHHHHHHHHHHHHHcCCEEEEEEEeccCCCCCHHHHHHHHHHHH-HcCCCE
Q ss_pred EEEEeecCCCCcCCHHHHHHHHHHHHhc-CCeEEEEc-CChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHH
Q 009410 200 FKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR 277 (535)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (535)
+-+ .+..| ...+..+.+++...++. ++++.+|+ .+........-...+.|...+..-....-......++...+.
T Consensus 171 I~i-~Dt~G--~~~P~~~~~lv~~lk~~~~~pi~~H~Hnt~Gla~An~laAv~aGad~vD~ai~g~g~~agn~~~e~vv~ 247 (592)
T PRK09282 171 ICI-KDMAG--LLTPYAAYELVKALKEEVDLPVQLHSHCTSGLAPMTYLKAVEAGVDIIDTAISPLAFGTSQPPTESMVA 247 (592)
T ss_pred EEE-CCcCC--CcCHHHHHHHHHHHHHhCCCeEEEEEcCCCCcHHHHHHHHHHhCCCEEEeeccccCCCcCCHhHHHHHH
Q ss_pred HHHhcCCC
Q 009410 278 LAEFVNTP 285 (535)
Q Consensus 278 ~~~~~~~~ 285 (535)
.....+..
T Consensus 248 ~L~~~g~~ 255 (592)
T PRK09282 248 ALKGTPYD 255 (592)
T ss_pred HHHhCCCC
No 215
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [].; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3Q94_A 1RVG_B 1RV8_C 3C4U_A 3C56_B 3C52_A 2FJK_A 3N9R_P 3N9S_A 1GVF_B ....
Probab=42.46 E-value=1.3e+02 Score=29.04 Aligned_cols=106 Identities=13% Similarity=0.053 Sum_probs=65.4
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCC-HHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMIN-DELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~-~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+-+....+-+.+++.+...+--+ ......... ......+...|++.+.|+.+|...... .+.+...++.|++++--.
T Consensus 26 n~e~~~avi~AAe~~~sPvIlq~-~~~~~~~~~~~~~~~~~~~~a~~~~vPValHLDH~~~-~e~i~~ai~~GftSVM~D 103 (287)
T PF01116_consen 26 NLETARAVIEAAEELNSPVILQI-SPSEVKYMGLEYLAAMVKAAAEEASVPVALHLDHGKD-FEDIKRAIDAGFTSVMID 103 (287)
T ss_dssp SHHHHHHHHHHHHHTTS-EEEEE-EHHHHHHHHHHHHHHHHHHHHHHSTSEEEEEEEEE-S-HHHHHHHHHHTSSEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEc-chhhhhhhhHHHHHHHHHHHHHHcCCCEEeecccCCC-HHHHHHHHHhCccccccc
Confidence 44556666666666676665322 111000112 233345666777889999999855544 345566677799888766
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (535)
....|.........+..+++...|..+-.
T Consensus 104 gS~l~~eeNi~~T~~vv~~ah~~gv~VEa 132 (287)
T PF01116_consen 104 GSALPFEENIAITREVVEYAHAYGVSVEA 132 (287)
T ss_dssp -TTS-HHHHHHHHHHHHHHHHHTT-EEEE
T ss_pred CCcCCHHHHHHHHHHHHHhhhhhCCEEEE
Confidence 67778777778888999999998876643
No 216
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=41.71 E-value=20 Score=28.18 Aligned_cols=7 Identities=43% Similarity=0.102 Sum_probs=4.4
Q ss_pred hhHHHHH
Q 009410 5 MASAFTH 11 (535)
Q Consensus 5 ~~~~~~~ 11 (535)
|+|+...
T Consensus 1 MaSK~~l 7 (95)
T PF07172_consen 1 MASKAFL 7 (95)
T ss_pred CchhHHH
Confidence 6777643
No 217
>PF01964 ThiC: ThiC family; InterPro: IPR002817 ThiC is found within the thiamin biosynthesis operon. ThiC is involved in thiamin biosynthesis []. The precise catalytic function of ThiC is still not known. ThiC participates in the formation of 4-Amino-5-hydroxymethyl-2-methylpyrimidine from AIR, an intermediate in the de novo pyrimidine biosynthesis.; GO: 0009228 thiamine biosynthetic process; PDB: 3EPO_A 3EPN_B 3EPM_B.
Probab=41.43 E-value=4e+02 Score=27.07 Aligned_cols=144 Identities=13% Similarity=0.003 Sum_probs=67.8
Q ss_pred HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee-------ec-CChhhHHHHHHHHHHcCCCEE
Q 009410 129 SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-------TK-WDEVVSDEMEVMVKEKGINSF 200 (535)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~g~~~i 200 (535)
.-+..+.++|--|++|.....+ +....+...+..+-..-.++.+... .. ..++..+.+++.+ +.|++++
T Consensus 80 ~K~~~A~~~GADtvMDLStggd--l~~iR~~il~~~~vpvGTVPiYqa~~~~~~~~~~~t~d~~~~~ie~qa-~~GVDfm 156 (420)
T PF01964_consen 80 EKLKIAEKAGADTVMDLSTGGD--LDEIRRAILENSPVPVGTVPIYQAAIRKGGSIVDMTEDDFFDVIEKQA-KDGVDFM 156 (420)
T ss_dssp HHHHHHHHTT-SEEEE---STT--HHHHHHHHHHT-SS-EEE-HHHHHHHHTTT-GGG--HHHHHHHHHHHH-HHT--EE
T ss_pred HHHHHHHHhCCCEEEEcCCCCC--HHHHHHHHHHhCCCccccchHHHHHHHhCCChhhCCHHHHHHHHHHHH-HcCCCEE
Confidence 3456789999999999965432 4444444444332211122222211 11 2345667777777 7899999
Q ss_pred EEEeecC-------------------------------CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHH
Q 009410 201 KFFMAYK-------------------------------GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMI 249 (535)
Q Consensus 201 k~~~~~~-------------------------------~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~ 249 (535)
.+...-. +....--+.+.++++.++++...++.--.-.
T Consensus 157 tiH~git~~~~~~~~~~~R~~giVSRGGs~l~~WM~~n~~ENPly~~fD~lLeI~k~yDVtLSLGDglR----------- 225 (420)
T PF01964_consen 157 TIHCGITRETLERLKKSGRIMGIVSRGGSILAAWMLHNGKENPLYEHFDRLLEIAKEYDVTLSLGDGLR----------- 225 (420)
T ss_dssp EE-TT--GGGGGGGT--TSSS----HHHHHHHHHHHHHTS--HHHHTHHHHHHHHTTTT-EEEE--TT------------
T ss_pred EEccchhHHHHHHHhhhccccCccccchHHHHHHHHhcCCcCcHHHhHHHHHHHHHHhCeeEecccccC-----------
Confidence 8765410 0011113556778888888877776432100
Q ss_pred HcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEE
Q 009410 250 ELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (535)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 290 (535)
++.......+....|...+-++.+.+.+.|+.+.+..
T Consensus 226 ----PG~i~Da~D~aQi~EL~~lgeL~~rA~e~gVQvMVEG 262 (420)
T PF01964_consen 226 ----PGCIADATDRAQIQELIILGELVKRAREAGVQVMVEG 262 (420)
T ss_dssp -----SSGGGTT-HHHHHHHHHHHHHHHHHHHTT--EEEEE
T ss_pred ----CCCcCCCCcHHHHHHHHHHHHHHHHHHHCCCeEEeeC
Confidence 0111111223344455556677777888898887764
No 218
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=41.35 E-value=3.3e+02 Score=26.18 Aligned_cols=114 Identities=11% Similarity=-0.010 Sum_probs=59.5
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHHHHc
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMVKEK 195 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 195 (535)
+..+.+.+......++..||..+.-.+..+.. +..+..+..........-+.....+....+ .+..+..+. +++.
T Consensus 17 g~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~gv~~~st~~~i~~a~~-a~~~ 95 (289)
T PF00701_consen 17 GSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIAGVGANSTEEAIELARH-AQDA 95 (289)
T ss_dssp SSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEEEEESSSHHHHHHHHHH-HHHT
T ss_pred cCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEecCcchhHHHHHHHHHH-Hhhc
Confidence 45566677777888899999998865544333 222222222111111122234444455444 344444444 4488
Q ss_pred CCCEEEEEeecCCCCcCCHHHHHH-HHHHHHhcCCeEEEEcC
Q 009410 196 GINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHAE 236 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~~ 236 (535)
|++.+-+..-+. ...+.+.+.+ .-+.+...++++.++-.
T Consensus 96 Gad~v~v~~P~~--~~~s~~~l~~y~~~ia~~~~~pi~iYn~ 135 (289)
T PF00701_consen 96 GADAVLVIPPYY--FKPSQEELIDYFRAIADATDLPIIIYNN 135 (289)
T ss_dssp T-SEEEEEESTS--SSCCHHHHHHHHHHHHHHSSSEEEEEEB
T ss_pred CceEEEEecccc--ccchhhHHHHHHHHHHhhcCCCEEEEEC
Confidence 999987654332 2345544444 44445566789888753
No 219
>TIGR00167 cbbA ketose-bisphosphate aldolases. fructose-bisphosphate and tagatose-bisphosphate aldolase.
Probab=41.33 E-value=3.4e+02 Score=26.29 Aligned_cols=65 Identities=26% Similarity=0.294 Sum_probs=39.3
Q ss_pred HHHHHHHHHHcCCCEEEEEee-cCC----CCc-CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-YKG----SFM-INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-~~~----~~~-~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (535)
.++..++.++.|.+.+-+..+ .|| .+. ++.+.++++-+ ..++|++.|-.+.-. .+.++.+...|+
T Consensus 160 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~p~~Ld~~~L~~I~~---~v~vPLVlHGgSG~~-~e~~~~ai~~Gi 230 (288)
T TIGR00167 160 PEEAKEFVKLTGVDSLAAAIGNVHGVYKGEPKGLDFERLEEIQK---YVNLPLVLHGGSGIP-DEEIKKAISLGV 230 (288)
T ss_pred HHHHHHHHhccCCcEEeeccCccccccCCCCCccCHHHHHHHHH---HhCCCEEEeCCCCCC-HHHHHHHHHcCC
Confidence 356666776789998876654 233 334 67777777754 348999999754322 223444444454
No 220
>PF02811 PHP: PHP domain; InterPro: IPR004013 The PHP (Polymerase and Histidinol Phosphatase) domain is a putative phosphoesterase domain. This family is often associated with an N-terminal region IPR003141 from INTERPRO.; GO: 0003824 catalytic activity; PDB: 2WJE_A 3QY8_A 2WJD_A 2WJF_A 1PB0_B 1M68_A 1M65_A 3E38_B 2W9M_A 3E0F_A ....
Probab=41.12 E-value=23 Score=30.88 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=22.7
Q ss_pred cccccccccc-cCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 108 IDPHTHLAME-FMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 108 ID~H~H~~~~-~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
||.|+|...+ ..|..+.+++ ...+.+.|++++.
T Consensus 1 iDlH~HT~~s~~dg~~~~~e~---v~~A~~~Gl~~i~ 34 (175)
T PF02811_consen 1 IDLHVHTKYSILDGKDSPEEY---VEQAKEKGLDAIA 34 (175)
T ss_dssp EEEEB--TTTSSTSSSSHHHH---HHHHHHTTESEEE
T ss_pred CCccccccCcchhhcCCHHHH---HHHHHHcCCCEEE
Confidence 7999998776 3445555544 6888999999876
No 221
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=40.23 E-value=3.6e+02 Score=27.18 Aligned_cols=86 Identities=10% Similarity=0.082 Sum_probs=49.5
Q ss_pred ccccccCChhhHHHHHHHHHHHHHhcCCC--EEEEEcc-CHHHHHHH-HHHHHcCCcEEeccccceEeeCcccccCcCcc
Q 009410 257 EGHALSRPPLLEGEATTRAIRLAEFVNTP--LYVVHVM-SMDAMEEI-AKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332 (535)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~H~~-~~~~~~~~-~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 332 (535)
..|...++...+...+.++.+.+...+.+ .+..|++ +....+.+ +.+++.|+.+.. .+++|+.++.+.
T Consensus 161 ~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~~~~~~l~~v~~~l~~~Gv~~~~-~~~~H~~~~~~~------- 232 (388)
T PRK10657 161 SDHRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMGDGKKGLQPLFELLENTDIPISQ-FLPTHVNRNEPL------- 232 (388)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCchHHHHHHHHHHHhcCCCcce-eeCcccCCCHHH-------
Confidence 34444455555555566665555554432 6788987 45555666 444678877664 555554332211
Q ss_pred ccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeC
Q 009410 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (535)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgt 366 (535)
.+...++++.|..+.+..
T Consensus 233 ----------------~~~~~~~~~~G~~~~v~~ 250 (388)
T PRK10657 233 ----------------FEQALEFAKKGGVIDLTT 250 (388)
T ss_pred ----------------HHHHHHHHHcCCeEEEec
Confidence 133666777888776664
No 222
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=39.49 E-value=1.2e+02 Score=30.82 Aligned_cols=43 Identities=12% Similarity=0.000 Sum_probs=32.5
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEEc-CChhhHHHHHHHHHHcCCCCcc
Q 009410 211 MINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPE 257 (535)
Q Consensus 211 ~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~ 257 (535)
..+.+.++++++.|+++|+++..|+ +... .++...+.|+...+
T Consensus 210 ~~~~e~i~~~v~~A~~~g~~v~sH~~~~~~----~i~~a~~~Gv~~~e 253 (383)
T PRK15446 210 RYAPPNRRAIAALARARGIPLASHDDDTPE----HVAEAHALGVAIAE 253 (383)
T ss_pred hcCHHHHHHHHHHHHHCCCceeecCCCCHH----HHHHHHHcCCceee
Confidence 3578999999999999999999999 4543 34455556776543
No 223
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=39.11 E-value=3.6e+02 Score=25.92 Aligned_cols=121 Identities=12% Similarity=0.050 Sum_probs=64.1
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccc
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
.+.+..+. +.|++++-+..+......++.++-.++++.+.+. .+++.+|+.. .....+..+.+.+.|...+.-.
T Consensus 22 ~~~i~~l~-~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~~~~~~~vi~gv~~~s~~~~i~~a~~a~~~Gad~v~v~ 100 (285)
T TIGR00674 22 EKLIDFQI-ENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDLVNGRVPVIAGTGSNATEEAISLTKFAEDVGADGFLVV 100 (285)
T ss_pred HHHHHHHH-HcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCccHHHHHHHHHHHHHcCCCEEEEc
Confidence 33344444 6788887553333334567888877777765543 4788888743 3334445556677776553211
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHHc
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~ 306 (535)
........+.+-......++...+.++.+.+..... ..+.+.++.+.
T Consensus 101 pP~y~~~~~~~i~~~~~~i~~~~~~pi~lYn~P~~tg~~l~~~~l~~L~~~ 151 (285)
T TIGR00674 101 TPYYNKPTQEGLYQHFKAIAEEVDLPIILYNVPSRTGVSLYPETVKRLAEE 151 (285)
T ss_pred CCcCCCCCHHHHHHHHHHHHhcCCCCEEEEECcHHhcCCCCHHHHHHHHcC
Confidence 111111112222233333455567888877764311 23666766643
No 224
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=39.02 E-value=3.6e+02 Score=25.91 Aligned_cols=110 Identities=13% Similarity=0.029 Sum_probs=57.1
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHH---HHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
|..+.+.+......++..||..+.-++..+.. +..+ .++...+.... ......+....+ .+..+.. +.+
T Consensus 14 g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~~~~---~~~vi~gv~~~s~~~~i~~a-~~a 89 (285)
T TIGR00674 14 GSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDLVNG---RVPVIAGTGSNATEEAISLT-KFA 89 (285)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCC---CCeEEEeCCCccHHHHHHHH-HHH
Confidence 45566677777778889999988855433332 2222 22222222211 222333333322 3333333 444
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++.+-+..-+. ...+++.+.+.+. .+...++++.++-
T Consensus 90 ~~~Gad~v~v~pP~y--~~~~~~~i~~~~~~i~~~~~~pi~lYn 131 (285)
T TIGR00674 90 EDVGADGFLVVTPYY--NKPTQEGLYQHFKAIAEEVDLPIILYN 131 (285)
T ss_pred HHcCCCEEEEcCCcC--CCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 478999987654332 2335555544443 3555678887663
No 225
>TIGR00587 nfo apurinic endonuclease (APN1). All proteins in this family for which functions are known are 5' AP endonculeases that are used in base excision repair and the repair of abasic sites in DNA.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=38.86 E-value=3.5e+02 Score=25.78 Aligned_cols=93 Identities=18% Similarity=0.174 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHcCCCEEEEEeecCCC---CcCCHHHHHHHHHHHHhcCCe---EEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009410 184 VSDEMEVMVKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSLGAL---AMVHAENGDAVFEGQKRMIELGITGPE 257 (535)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~a~~~g~~---v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (535)
....++++. +.|.+.+-+|...+.. ...+.+...++.+...++++. +.+|+...- .+.++
T Consensus 13 ~~~a~~~~~-~~G~~~~qif~~~P~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Hapy~i------------Nlas~- 78 (274)
T TIGR00587 13 LQAAYNRAA-EIGATAFMFFLKSPRWWRRPMLEEEVIDWFKAALETNKNLSQIVLVHAPYLI------------NLASP- 78 (274)
T ss_pred HHHHHHHHH-HhCCCEEEEEecCccccCCCCCCHHHHHHHHHHHHHcCCCCcceeccCCeee------------ecCCC-
Confidence 344555555 8899999999876543 334567777777777777765 788875420 00000
Q ss_pred cccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccC
Q 009410 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (535)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 293 (535)
...-.....+.+.+.++.+...|.+....|...
T Consensus 79 ---~~~~r~~sv~~~~~~i~~A~~lga~~vv~H~G~ 111 (274)
T TIGR00587 79 ---DEEKEEKSLDVLDEELKRCELLGIMLYNFHPGS 111 (274)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 000011224567788899999999888888754
No 226
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=38.46 E-value=2.3e+02 Score=25.79 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=56.2
Q ss_pred chhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEE
Q 009410 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKF 202 (535)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~ 202 (535)
+.++.....+.++..|++.+= .... .....+.++...+..++.. +| ..+-.+ .+..+... +.|++++-
T Consensus 14 ~~~~a~~ia~al~~gGi~~iE-it~~-tp~a~~~I~~l~~~~~~~~--vG---AGTVl~---~e~a~~ai-~aGA~Fiv- 81 (201)
T PRK06015 14 DVEHAVPLARALAAGGLPAIE-ITLR-TPAALDAIRAVAAEVEEAI--VG---AGTILN---AKQFEDAA-KAGSRFIV- 81 (201)
T ss_pred CHHHHHHHHHHHHHCCCCEEE-EeCC-CccHHHHHHHHHHHCCCCE--Ee---eEeCcC---HHHHHHHH-HcCCCEEE-
Confidence 455666677888999999663 2222 2235566666554443211 11 112222 23445555 78888772
Q ss_pred EeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhH
Q 009410 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (535)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~ 241 (535)
++..-.++++.|+++++++.--+.++.++
T Consensus 82 ----------SP~~~~~vi~~a~~~~i~~iPG~~TptEi 110 (201)
T PRK06015 82 ----------SPGTTQELLAAANDSDVPLLPGAATPSEV 110 (201)
T ss_pred ----------CCCCCHHHHHHHHHcCCCEeCCCCCHHHH
Confidence 33344567778899999988766666544
No 227
>PRK07084 fructose-bisphosphate aldolase; Provisional
Probab=38.31 E-value=4e+02 Score=26.24 Aligned_cols=105 Identities=13% Similarity=0.048 Sum_probs=66.9
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCC----HHHHHHHHHHHHhc--CCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMIN----DELLIEGFKRCKSL--GALAMVHAENGDAVFEGQKRMIELGIT 254 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~----~~~l~~~~~~a~~~--g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (535)
+.+..+.+-+.+++.+...+--. ......... ......+...|++. ..|+.+|....... +.+...++.|++
T Consensus 33 n~e~~~avi~AAee~~sPvIlq~-s~~~~~~~g~~~~~~~~~~~~~~a~~a~~~VPV~lHLDHg~~~-e~i~~ai~~Gft 110 (321)
T PRK07084 33 NMEQLQAIIQACVETKSPVILQV-SKGARKYANATLLRYMAQGAVEYAKELGCPIPIVLHLDHGDSF-ELCKDCIDSGFS 110 (321)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEe-chhHHhhCCchHHHHHHHHHHHHHHHcCCCCcEEEECCCCCCH-HHHHHHHHcCCC
Confidence 34555666666656666555321 111001112 22334455667776 68999999665443 455667788999
Q ss_pred CcccccccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 255 GPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
++--.....|.........+..+++...|..+-
T Consensus 111 SVMiD~S~lp~eeNI~~T~evv~~Ah~~GvsVE 143 (321)
T PRK07084 111 SVMIDGSHLPYEENVALTKKVVEYAHQFDVTVE 143 (321)
T ss_pred EEEeeCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 887666677888888889999999998887654
No 228
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=37.95 E-value=3.1e+02 Score=24.84 Aligned_cols=101 Identities=13% Similarity=0.141 Sum_probs=57.0
Q ss_pred CchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEE
Q 009410 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (535)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik 201 (535)
.+.++.....+.++..|++.+= ..... ....+.++...+..++..+..+ +-.+ .+..+... +.|++++-
T Consensus 17 ~~~~~a~~~~~al~~gGi~~iE-iT~~t-~~a~~~I~~l~~~~p~~~vGAG-----TV~~---~e~a~~a~-~aGA~Fiv 85 (196)
T PF01081_consen 17 DDPEDAVPIAEALIEGGIRAIE-ITLRT-PNALEAIEALRKEFPDLLVGAG-----TVLT---AEQAEAAI-AAGAQFIV 85 (196)
T ss_dssp SSGGGHHHHHHHHHHTT--EEE-EETTS-TTHHHHHHHHHHHHTTSEEEEE-----S--S---HHHHHHHH-HHT-SEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEE-EecCC-ccHHHHHHHHHHHCCCCeeEEE-----eccC---HHHHHHHH-HcCCCEEE
Confidence 3556666778888999999653 32222 2356666666655544222211 1122 34445555 77888872
Q ss_pred EEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHH
Q 009410 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (535)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~ 244 (535)
++..-.++++.|+++++++.--+.++.++...
T Consensus 86 -----------SP~~~~~v~~~~~~~~i~~iPG~~TptEi~~A 117 (196)
T PF01081_consen 86 -----------SPGFDPEVIEYAREYGIPYIPGVMTPTEIMQA 117 (196)
T ss_dssp -----------ESS--HHHHHHHHHHTSEEEEEESSHHHHHHH
T ss_pred -----------CCCCCHHHHHHHHHcCCcccCCcCCHHHHHHH
Confidence 23344567888999999999888777654433
No 229
>cd00959 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family. DERA belongs to the class I aldolases and catalyzes a reversible aldol reaction between acetaldehyde and glyceraldehyde 3-phosphate to generate 2-deoxyribose 5-phosphate. DERA is unique in catalyzing the aldol reaction between two aldehydes, and its broad substrate specificity confers considerable utility as a biocatalyst, offering an environmentally benign alternative to chiral transition metal catalysis of the asymmetric aldol reaction.
Probab=37.33 E-value=3.2e+02 Score=24.76 Aligned_cols=101 Identities=18% Similarity=0.137 Sum_probs=54.7
Q ss_pred CCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccc----cceeeeeecCChhhHHHHHHHHHHcC
Q 009410 121 SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMD----YGFHMAITKWDEVVSDEMEVMVKEKG 196 (535)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g 196 (535)
..+.+++......+..+|+..++-. ...++...+......+. .+|..+. ........++++.. +.|
T Consensus 13 ~~t~~~i~~~~~~a~~~~~~av~v~--------p~~v~~~~~~l~~~~~~v~~~~~fp~g~-~~~~~k~~eve~A~-~~G 82 (203)
T cd00959 13 DATEEDIRKLCDEAKEYGFAAVCVN--------PCFVPLAREALKGSGVKVCTVIGFPLGA-TTTEVKVAEAREAI-ADG 82 (203)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEc--------HHHHHHHHHHcCCCCcEEEEEEecCCCC-CcHHHHHHHHHHHH-HcC
Confidence 3466777777888888999988733 11222211111111111 1221111 22334556666766 789
Q ss_pred CCEEEEEeecC----CCCcCCHHHHHHHHHHHHhcCCeEEE
Q 009410 197 INSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMV 233 (535)
Q Consensus 197 ~~~ik~~~~~~----~~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (535)
++.+.+.+.+. +......+.+.++.+.|+ |+++-+
T Consensus 83 Adevdvv~~~g~~~~~~~~~~~~ei~~v~~~~~--g~~lkv 121 (203)
T cd00959 83 ADEIDMVINIGALKSGDYEAVYEEIAAVVEACG--GAPLKV 121 (203)
T ss_pred CCEEEEeecHHHHhCCCHHHHHHHHHHHHHhcC--CCeEEE
Confidence 99999877653 122223456677777765 666554
No 230
>PRK07084 fructose-bisphosphate aldolase; Provisional
Probab=37.29 E-value=4.2e+02 Score=26.13 Aligned_cols=51 Identities=25% Similarity=0.347 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCEEEEEee-cCCC---------CcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-YKGS---------FMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-~~~~---------~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
.++..++.++.|++.+-+... .||. +.++.+.++++-+.. .++|++.|-.+
T Consensus 166 peeA~~Fv~~TgvD~LAvaiGt~HG~Y~~~~~~~~p~Ld~d~L~~I~~~~--~~vPLVLHGgS 226 (321)
T PRK07084 166 PEEVEDFVKKTGVDSLAISIGTSHGAYKFKPGQCPPPLRFDILEEIEKRI--PGFPIVLHGSS 226 (321)
T ss_pred HHHHHHHHHHhCCCEEeeccccccccccCCCCCCCCccCHHHHHHHHHhc--CCCCEEEeCCC
Confidence 455666676789998876543 1232 346777777665543 16899999755
No 231
>PRK05835 fructose-bisphosphate aldolase; Provisional
Probab=36.59 E-value=4.2e+02 Score=25.95 Aligned_cols=105 Identities=12% Similarity=0.096 Sum_probs=66.8
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcC-CeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLG-ALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g-~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (535)
+-+..+.+-+.+++.+...+--. ..........+.+..++. .|++.. .|+.+|....... +.+...++.|++++--
T Consensus 26 n~e~~~avi~AAe~~~sPvIlq~-s~~~~~~~g~~~~~~~~~~~a~~~~~VPValHLDHg~~~-e~i~~ai~~GftSVM~ 103 (307)
T PRK05835 26 NFEMLNAIFEAGNEENSPLFIQA-SEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTF-ESCEKAVKAGFTSVMI 103 (307)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEc-CccHHhhCChHHHHHHHHHHHHhcCCCeEEEECCCCCCH-HHHHHHHHcCCCEEEE
Confidence 44555666666656666655321 111111123455555554 445664 8999999665543 4555677889988776
Q ss_pred ccccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 259 HALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
.....|.....+...+..+++...|..+-
T Consensus 104 DgS~l~~eeNi~~T~~vve~Ah~~gv~VE 132 (307)
T PRK05835 104 DASHHAFEENLELTSKVVKMAHNAGVSVE 132 (307)
T ss_pred eCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 66667777777888899999998887654
No 232
>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]
Probab=36.56 E-value=4.1e+02 Score=27.06 Aligned_cols=26 Identities=15% Similarity=-0.134 Sum_probs=19.7
Q ss_pred CCcCCHHHHHHHHHHHHhcCCeEEEE
Q 009410 209 SFMINDELLIEGFKRCKSLGALAMVH 234 (535)
Q Consensus 209 ~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (535)
...++.+...++++..++-++++.--
T Consensus 185 ~~gi~l~~~neiL~~~kkGkl~iv~~ 210 (503)
T KOG2550|consen 185 AQGITLKEANEILKKIKKGKLPVVDD 210 (503)
T ss_pred cccccHHHHHHHHHhhhcCCcceecc
Confidence 34567888899999888877777643
No 233
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=35.90 E-value=4.1e+02 Score=25.62 Aligned_cols=110 Identities=11% Similarity=-0.005 Sum_probs=56.8
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---C---hHHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---S---LTAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
+..+.+.+......++..||..+.-.+..+.. + -.+.++...+... -+.....+....+ .+..+..+ .+
T Consensus 17 g~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~~~---~~~~vi~gv~~~~~~~~i~~a~-~a 92 (292)
T PRK03170 17 GSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEAVN---GRVPVIAGTGSNSTAEAIELTK-FA 92 (292)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHHhC---CCCcEEeecCCchHHHHHHHHH-HH
Confidence 44566667777788889999998754433322 2 2222333333221 1223333333322 33444343 34
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++.+-+..-+. ...+++.+.+.+. .+...++++..+-
T Consensus 93 ~~~G~d~v~~~pP~~--~~~~~~~i~~~~~~ia~~~~~pv~lYn 134 (292)
T PRK03170 93 EKAGADGALVVTPYY--NKPTQEGLYQHFKAIAEATDLPIILYN 134 (292)
T ss_pred HHcCCCEEEECCCcC--CCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 478999887643322 2334555544443 3455678887763
No 234
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=35.71 E-value=4.3e+02 Score=25.83 Aligned_cols=113 Identities=4% Similarity=-0.048 Sum_probs=58.8
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcC
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKG 196 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 196 (535)
|..+.+.+......++.+||..+.-.+..+.. +..+..+..........-+.+...+....+-+..-++.+.+++.|
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi~Gv~~~~t~~ai~~a~~A~~~G 103 (309)
T cd00952 24 DTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVFVGATTLNTRDTIARTRALLDLG 103 (309)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHHhC
Confidence 45666777777788889999998855443332 222222222221111111233344444333222333334445889
Q ss_pred CCEEEEEeecCCCCcCCHHHHHHHHHH-HHhc-CCeEEEE
Q 009410 197 INSFKFFMAYKGSFMINDELLIEGFKR-CKSL-GALAMVH 234 (535)
Q Consensus 197 ~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~-g~~v~~H 234 (535)
++.+-+..-+. ...+.+.+.+.++. |... ++++.+.
T Consensus 104 ad~vlv~~P~y--~~~~~~~l~~yf~~va~a~~~lPv~iY 141 (309)
T cd00952 104 ADGTMLGRPMW--LPLDVDTAVQFYRDVAEAVPEMAIAIY 141 (309)
T ss_pred CCEEEECCCcC--CCCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 99987654322 23455555554444 4445 5888776
No 235
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=35.64 E-value=4.2e+02 Score=25.63 Aligned_cols=119 Identities=14% Similarity=0.040 Sum_probs=61.0
Q ss_pred HHHHHHHHHcC-CCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccc
Q 009410 186 DEMEVMVKEKG-INSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 186 ~~~~~~~~~~g-~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+.++.+. ..| ++++-+..+......++.++-.++++.+.+. .+++.+++. +.....+..+...+.|...+.-.
T Consensus 25 ~~i~~~i-~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~~t~~~i~la~~a~~~Gad~v~v~ 103 (290)
T TIGR00683 25 QIIRHNI-DKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAV 103 (290)
T ss_pred HHHHHHH-hCCCcCEEEECCcccccccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 3333444 567 7776554333334567777777777655543 467888874 33444455556677776554321
Q ss_pred cccCChhhHHHHHHHHHHHHHhc-CCCEEEEEccCHH----HHHHHHHHHH
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
........+.+-+....+++... +.++.+.+..... ..+.+.++.+
T Consensus 104 ~P~y~~~~~~~i~~yf~~v~~~~~~lpv~lYn~P~~tg~~l~~~~i~~L~~ 154 (290)
T TIGR00683 104 TPFYYKFSFPEIKHYYDTIIAETGGLNMIVYSIPFLTGVNMGIEQFGELYK 154 (290)
T ss_pred CCcCCCCCHHHHHHHHHHHHhhCCCCCEEEEeCccccccCcCHHHHHHHhc
Confidence 11111112222222233334444 5788877764311 2256666664
No 236
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=35.22 E-value=4.3e+02 Score=25.71 Aligned_cols=122 Identities=14% Similarity=0.054 Sum_probs=69.7
Q ss_pred hHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCCCCccc
Q 009410 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGITGPEG 258 (535)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~ 258 (535)
..+++.++.-+.|++++-+..+....+.++.++-.++++.+.+. .+++.+++.. .....+..+...+.|..+...
T Consensus 26 a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpviaG~g~~~t~eai~lak~a~~~Gad~il~ 105 (299)
T COG0329 26 ALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIAGVGSNSTAEAIELAKHAEKLGADGILV 105 (299)
T ss_pred HHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEEecCCCcHHHHHHHHHHHHhcCCCEEEE
Confidence 33343333337888887554444445678888888888877754 3668888743 344555666777888766432
Q ss_pred ccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
.........+..-.+.....+...+.++.+....... ..+.+.++++
T Consensus 106 v~PyY~k~~~~gl~~hf~~ia~a~~lPvilYN~P~~tg~~l~~e~i~~la~ 156 (299)
T COG0329 106 VPPYYNKPSQEGLYAHFKAIAEAVDLPVILYNIPSRTGVDLSPETIARLAE 156 (299)
T ss_pred eCCCCcCCChHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 2222222223333444444556668888776643221 2366777765
No 237
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=35.20 E-value=2.8e+02 Score=25.30 Aligned_cols=97 Identities=15% Similarity=0.165 Sum_probs=55.6
Q ss_pred chhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEE
Q 009410 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKF 202 (535)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~ 202 (535)
+.++.....+.++..|++.+--. ... ....+.++...+..++.. ++ ..+-.+ .+..+... +.|++++
T Consensus 18 ~~e~a~~~~~al~~~Gi~~iEit-~~t-~~a~~~i~~l~~~~~~~~--vG---AGTVl~---~~~a~~a~-~aGA~Fi-- 84 (204)
T TIGR01182 18 DVDDALPLAKALIEGGLRVLEVT-LRT-PVALDAIRLLRKEVPDAL--IG---AGTVLN---PEQLRQAV-DAGAQFI-- 84 (204)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe-CCC-ccHHHHHHHHHHHCCCCE--EE---EEeCCC---HHHHHHHH-HcCCCEE--
Confidence 45666667788899999966422 111 235555666655443211 11 112222 34455555 7899887
Q ss_pred EeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhH
Q 009410 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (535)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~ 241 (535)
++ +..-..+++.|+++++++..-+.++.++
T Consensus 85 -vs--------P~~~~~v~~~~~~~~i~~iPG~~TptEi 114 (204)
T TIGR01182 85 -VS--------PGLTPELAKHAQDHGIPIIPGVATPSEI 114 (204)
T ss_pred -EC--------CCCCHHHHHHHHHcCCcEECCCCCHHHH
Confidence 22 2223467788899999988766666544
No 238
>PRK07315 fructose-bisphosphate aldolase; Provisional
Probab=34.87 E-value=4.3e+02 Score=25.63 Aligned_cols=105 Identities=11% Similarity=-0.000 Sum_probs=61.7
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHH-HHHHHHhc--CCeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSL--GALAMVHAENGDAVFEGQKRMIELGITGPE 257 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~--g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (535)
+.+..+.+-+.+++.+...+--............+.+.. +...|++. +.|+.+|.... .. +.+...++.|++++.
T Consensus 27 n~e~~~avi~aAe~~~sPvIlq~s~~~~~~~~~~~~~~~~~~~~a~~~~~~vPV~lHLDH~-~~-~~i~~ai~~GftSVm 104 (293)
T PRK07315 27 NLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKVCKNLIENLVESMGITVPVAIHLDHG-HY-EDALECIEVGYTSIM 104 (293)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEcCccHHhhcCcHHHHHHHHHHHHHHcCCCCcEEEECCCC-CH-HHHHHHHHcCCCEEE
Confidence 445555666666566666653211110011111344444 33455566 67999999666 33 356666788988876
Q ss_pred cccccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
......|.........++.+++...+..+-
T Consensus 105 ~d~S~l~~eEni~~t~~v~~~a~~~gv~vE 134 (293)
T PRK07315 105 FDGSHLPVEENLKLAKEVVEKAHAKGISVE 134 (293)
T ss_pred EcCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 555566666666777788888887776653
No 239
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=33.97 E-value=5e+02 Score=26.09 Aligned_cols=42 Identities=21% Similarity=0.131 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEc---cCHHH-HHHHHHHHHcCCcE
Q 009410 269 GEATTRAIRLAEFVNTPLYVVHV---MSMDA-MEEIAKARKAGQRV 310 (535)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~H~---~~~~~-~~~~~~~~~~g~~v 310 (535)
.+.+.+.++.....+.++.+.-. .+.+. .+.++.+.+.|+..
T Consensus 140 f~~~~~~i~~l~~~g~~v~i~~vv~~~N~~~i~~~~~~~~~lgv~~ 185 (378)
T PRK05301 140 FAKKLAVARLVKAHGYPLTLNAVIHRHNIDQIPRIIELAVELGADR 185 (378)
T ss_pred HHHHHHHHHHHHHCCCceEEEEEeecCCHHHHHHHHHHHHHcCCCE
Confidence 34455666777777777654322 22222 24455566677654
No 240
>cd00453 FTBP_aldolase_II Fructose/tagarose-bisphosphate aldolase class II. This family includes fructose-1,6-bisphosphate (FBP) and tagarose 1,6-bisphosphate (TBP) aldolases. FBP-aldolase is homodimeric and used in gluconeogenesis and glycolysis; the enzyme controls the condensation of dihydroxyacetone phosphate with glyceraldehyde-3-phosphate to yield fructose-1,6-bisphosphate. TBP-aldolase is tetrameric and produces tagarose-1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. Although structurally similar, the class I aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=33.87 E-value=4.8e+02 Score=25.87 Aligned_cols=70 Identities=7% Similarity=0.042 Sum_probs=49.0
Q ss_pred HHHHHHHHHhcCCeEEEEcCChh--hHHHHHHHHHHcC-----------CCCcccccccCChhhHHHHHHHHHHHHHhcC
Q 009410 217 LIEGFKRCKSLGALAMVHAENGD--AVFEGQKRMIELG-----------ITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283 (535)
Q Consensus 217 l~~~~~~a~~~g~~v~~H~~~~~--~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (535)
..-+...|+++++||.+|..... . .+.++.+++.| +++.--.....|.....+...+.++.+...+
T Consensus 74 ~~~~~~~A~~~~VPV~lHLDH~~~~~-~e~i~~ai~~G~~~~~~~~~~~FsSVMiDgS~l~~eeNi~~T~~vve~Ah~~g 152 (340)
T cd00453 74 AHHVHQMAEHYGVPVILHTDHCAKKL-LPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIG 152 (340)
T ss_pred HHHHHHHHHHCCCCEEEEcCCCCCCC-HHHHHHHHHcCCccccccCCCCceeEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 34455577788999999996554 3 36677778888 6665555555666666677778888888777
Q ss_pred CCEE
Q 009410 284 TPLY 287 (535)
Q Consensus 284 ~~~~ 287 (535)
..+-
T Consensus 153 i~VE 156 (340)
T cd00453 153 MTLE 156 (340)
T ss_pred CEEE
Confidence 6553
No 241
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=33.35 E-value=1.5e+02 Score=26.51 Aligned_cols=103 Identities=18% Similarity=0.066 Sum_probs=0.0
Q ss_pred HHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhH-
Q 009410 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLE- 268 (535)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~- 268 (535)
+.+++.|.+++.+..............+.++.+.++++|+.+..+..... ......
T Consensus 2 ~~~~~~G~~~vE~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~~-----------------------~~~~~~~ 58 (213)
T PF01261_consen 2 EAAAEAGFDGVELRFDDGQPWDEKDDEAEELRRLLEDYGLKIASLHPPTN-----------------------FWSPDEE 58 (213)
T ss_dssp HHHHHTTHSEEEEEHHHHSHHTHHHHHHHHHHHHHHHTTCEEEEEEEEES-----------------------SSCTGTT
T ss_pred hHHHHcCCCEEEEecCCCcccccchHHHHHHHHHHHHcCCeEEEEecccc-----------------------ccccccc
Q ss_pred -----------HHHHHHHHHHHHhcCCCEEEEEcc-------------------CHHHHHHHHHHHHcCCcEEeccccc
Q 009410 269 -----------GEATTRAIRLAEFVNTPLYVVHVM-------------------SMDAMEEIAKARKAGQRVIGEPVVS 317 (535)
Q Consensus 269 -----------~~~~~~~~~~~~~~~~~~~~~H~~-------------------~~~~~~~~~~~~~~g~~v~~~~~~~ 317 (535)
.+.+.+.++++...|.+....|.. ... ...+.+++.|+.+..++.+.
T Consensus 59 ~~~~~~~r~~~~~~~~~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~~~~~~~~l~--~l~~~a~~~gv~i~lE~~~~ 135 (213)
T PF01261_consen 59 NGSANDEREEALEYLKKAIDLAKRLGAKYIVVHSGRYPSGPEDDTEENWERLAENLR--ELAEIAEEYGVRIALENHPG 135 (213)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHTBSEEEEECTTESSSTTSSHHHHHHHHHHHHH--HHHHHHHHHTSEEEEE-SSS
T ss_pred ccCcchhhHHHHHHHHHHHHHHHHhCCCceeecCcccccccCCCHHHHHHHHHHHHH--HHHhhhhhhcceEEEecccC
No 242
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=32.54 E-value=4.7e+02 Score=25.32 Aligned_cols=106 Identities=13% Similarity=0.078 Sum_probs=67.0
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcC--CeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLG--ALAMVHAENGDAVFEGQKRMIELGITGPE 257 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g--~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (535)
+.+..+.+-+.+++.+...+--............+.+..++. .|++.. .|+.+|....... +.+...++.|++++-
T Consensus 27 n~e~~~avi~AAee~~sPvIl~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~vPV~lHLDHg~~~-e~i~~ai~~GftSVM 105 (286)
T PRK08610 27 NLEFTQAILEASQEENAPVILGVSEGAARYMSGFYTVVKMVEGLMHDLNITIPVAIHLDHGSSF-EKCKEAIDAGFTSVM 105 (286)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEcCccHHhhcCcHHHHHHHHHHHHHHcCCCCCEEEECCCCCCH-HHHHHHHHcCCCEEE
Confidence 445566666666566666653221111111122454555554 455665 7999999665443 444567788998887
Q ss_pred cccccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
-.....|.........+..+++...|..+-
T Consensus 106 ~DgS~l~~eeNi~~T~~vve~Ah~~gv~VE 135 (286)
T PRK08610 106 IDASHSPFEENVATTKKVVEYAHEKGVSVE 135 (286)
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 666667877778888999999998887654
No 243
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=32.34 E-value=5.2e+02 Score=25.73 Aligned_cols=101 Identities=16% Similarity=0.096 Sum_probs=44.1
Q ss_pred CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcc---------cccccCChhhHHHHHHHHHHH
Q 009410 208 GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE---------GHALSRPPLLEGEATTRAIRL 278 (535)
Q Consensus 208 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 278 (535)
|.+.+.++ +.++++.+++.|+.+.+...+.....+.++.+.+.|+..+. .|...+-.....+.+.+.++.
T Consensus 62 GEPll~~~-~~~ii~~~~~~g~~~~l~TNG~ll~~e~~~~L~~~g~~~v~iSldg~~~e~~d~~rg~~g~f~~v~~~i~~ 140 (358)
T TIGR02109 62 GEPLARPD-LVELVAHARRLGLYTNLITSGVGLTEARLDALADAGLDHVQLSFQGVDEALADRIAGYKNAFEQKLAMARA 140 (358)
T ss_pred cccccccc-HHHHHHHHHHcCCeEEEEeCCccCCHHHHHHHHhCCCCEEEEeCcCCCHHHHHHhcCCccHHHHHHHHHHH
Confidence 34444443 44566666666665554443332223344444444443211 111111111123444556666
Q ss_pred HHhcCCCEEEEEc---cCHHH-HHHHHHHHHcCCc
Q 009410 279 AEFVNTPLYVVHV---MSMDA-MEEIAKARKAGQR 309 (535)
Q Consensus 279 ~~~~~~~~~~~H~---~~~~~-~~~~~~~~~~g~~ 309 (535)
....+.++.+.-. .+.+. .+.++.+++.|+.
T Consensus 141 l~~~g~~v~v~~vv~~~N~~~l~~~~~~~~~lg~~ 175 (358)
T TIGR02109 141 VKAAGLPLTLNFVIHRHNIDQIPEIIELAIELGAD 175 (358)
T ss_pred HHhCCCceEEEEEeccCCHHHHHHHHHHHHHcCCC
Confidence 6667766544222 22222 2344555666654
No 244
>TIGR01235 pyruv_carbox pyruvate carboxylase. This enzyme plays a role in gluconeogensis but not glycolysis.
Probab=31.95 E-value=8.2e+02 Score=29.04 Aligned_cols=108 Identities=14% Similarity=0.082 Sum_probs=59.8
Q ss_pred HHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeee-----cCChhhHHHHHHHHHHcCCCEEE
Q 009410 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAIT-----KWDEVVSDEMEVMVKEKGINSFK 201 (535)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~ik 201 (535)
+...+.+.++||..++-+-.-.+. +....++...+.+...-..+.+..... ..+.+..-++.+.+.+.|++.+.
T Consensus 628 ~~f~~~~~~~GidifrifD~lN~~~n~~~~~~~~~~~g~~~~~~i~yt~~~~d~~~~~~~l~y~~~~ak~l~~~Gad~I~ 707 (1143)
T TIGR01235 628 KYFVKQAAQGGIDIFRVFDSLNWVENMRVGMDAVAEAGKVVEAAICYTGDILDPARPKYDLKYYTNLAVELEKAGAHILG 707 (1143)
T ss_pred HHHHHHHHHcCCCEEEECccCcCHHHHHHHHHHHHHcCCEEEEEEEEeccCCCcCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 344566789999988844222221 455556655555543222233222111 12233333444444478998775
Q ss_pred EEeecCCCCcCCHHHHHHHHHHHHh-cCCeEEEEcCCh
Q 009410 202 FFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENG 238 (535)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~ 238 (535)
+- +..| .+++.....++...++ .++++.+|+++.
T Consensus 708 ik-Dt~G--ll~P~~~~~Lv~~lk~~~~~pi~~H~Hdt 742 (1143)
T TIGR01235 708 IK-DMAG--LLKPAAAKLLIKALREKTDLPIHFHTHDT 742 (1143)
T ss_pred EC-CCcC--CcCHHHHHHHHHHHHHhcCCeEEEEECCC
Confidence 52 3222 3567788888877764 489999999665
No 245
>TIGR01856 hisJ_fam histidinol phosphate phosphatase HisJ family. This model represents the histidinol phosphate phosphatase HisJ of Bacillus subtilis, and related proteins from a number of species within a larger family of phosphatases in the PHP hydrolase family. HisJ catalyzes the penultimate step of histidine biosynthesis but shows no homology to the functionally equivalent sequence in E. coli, a domain of the bifunctional HisB protein. Note, however, that many species have two members and that Clostridium perfringens, predicted not to make histidine, has five members of this family; this family is designated subfamily rather than equivalog to indicate that members may not all act as HisJ.
Probab=31.08 E-value=4.5e+02 Score=24.70 Aligned_cols=33 Identities=21% Similarity=0.113 Sum_probs=23.1
Q ss_pred cccccccccccCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 108 IDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 108 ID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
+|.|+|.....-+ ...+....+.|.+.|++.+.
T Consensus 1 ~D~H~Ht~~s~d~---~~~~ee~v~~A~~~Gl~~i~ 33 (253)
T TIGR01856 1 RDGHSHSPFCAHG---TDTLEEVVQEAIQLGFEEIC 33 (253)
T ss_pred CCcccCcCCCCCC---CCCHHHHHHHHHHcCCCEEE
Confidence 5899998654223 33455557888999999876
No 246
>cd00019 AP2Ec AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar.
Probab=30.97 E-value=4.7e+02 Score=24.84 Aligned_cols=91 Identities=19% Similarity=0.051 Sum_probs=57.0
Q ss_pred HHHHHHHHcCCCEEEEEeecCCC---CcCCHHHHHHHHHHHHhc-CCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009410 187 EMEVMVKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
+.-+.+++.|.+++.+.++.... ...+.+.+.++.+.+.++ ++.+.+|...... .... ..
T Consensus 14 ~~l~~a~~~G~d~vEl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~------------~~~~----~~ 77 (279)
T cd00019 14 NALKRAKEIGFDTVAMFLGNPRSWLSRPLKKERAEKFKAIAEEGPSICLSVHAPYLIN------------LASP----DK 77 (279)
T ss_pred HHHHHHHHcCCCEEEEEcCCCCccCCCCCCHHHHHHHHHHHHHcCCCcEEEEcCceec------------cCCC----CH
Confidence 33344458899999877654322 123678899999999998 8899999743210 0000 00
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccC
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 293 (535)
.......+.+.+.++++...|.+.+..|...
T Consensus 78 ~~r~~~~~~~~~~i~~A~~lG~~~v~~~~g~ 108 (279)
T cd00019 78 EKREKSIERLKDEIERCEELGIRLLVFHPGS 108 (279)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 0011223557888999999999987776654
No 247
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=30.62 E-value=4.7e+02 Score=24.71 Aligned_cols=118 Identities=9% Similarity=-0.001 Sum_probs=65.0
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCC--CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYKG--SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~--~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
.+.++.+ ++.|.+++-++..... .+..+...++++.+.++++|+.+..+......... .+.. ...
T Consensus 16 ~~~l~~~-~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~v~s~~~~~~~~~~--------~~~~----~~~ 82 (275)
T PRK09856 16 EHAFRDA-SELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETNGYPY--------NMML----GDE 82 (275)
T ss_pred HHHHHHH-HHcCCCEEEEccCCccccccccCchHHHHHHHHHHHcCCeEEEecCcccCcCc--------cccC----CCH
Confidence 3444444 4889999987643221 11234567888888999999998776421100000 0000 000
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccCH------H---------HHHHHHHHHHcCCcEEeccc
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM------D---------AMEEIAKARKAGQRVIGEPV 315 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~------~---------~~~~~~~~~~~g~~v~~~~~ 315 (535)
.......+.+.+.++++...|.+....|.... + -.+..+.+++.|+.+..++.
T Consensus 83 ~~r~~~~~~~~~~i~~a~~lGa~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~iE~~ 150 (275)
T PRK09856 83 HMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPL 150 (275)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 00111235577888999999998876654311 0 12334555667887776653
No 248
>PRK07535 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; Validated
Probab=30.50 E-value=4.8e+02 Score=24.81 Aligned_cols=120 Identities=17% Similarity=0.115 Sum_probs=66.7
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh-cCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccC
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSR 263 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 263 (535)
.+...++. +.|++.+-+-.... ..-..+.+..+++..++ .+.++++-...+.....+++.+. |..-+.. .
T Consensus 28 ~~~A~~~~-~~GAdiIDVg~~~~--~~eE~~r~~~~v~~l~~~~~~plsIDT~~~~v~eaaL~~~~--G~~iINs----I 98 (261)
T PRK07535 28 QKLALKQA-EAGADYLDVNAGTA--VEEEPETMEWLVETVQEVVDVPLCIDSPNPAAIEAGLKVAK--GPPLINS----V 98 (261)
T ss_pred HHHHHHHH-HCCCCEEEECCCCC--chhHHHHHHHHHHHHHHhCCCCEEEeCCCHHHHHHHHHhCC--CCCEEEe----C
Confidence 34444555 78998887643311 11124456677777665 38888888887776666665432 3221110 0
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCEEEEEccC------H-----HHHHHHHHHHHcCC---cEEeccc
Q 009410 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMS------M-----DAMEEIAKARKAGQ---RVIGEPV 315 (535)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~------~-----~~~~~~~~~~~~g~---~v~~~~~ 315 (535)
. .+.....+.+.+...++.++++.|... . ...+.++.+.+.|+ .++..|.
T Consensus 99 s--~~~~~~~~~~~l~~~~g~~vv~m~~~~~g~P~t~~~~~~~l~~~v~~a~~~GI~~~~IilDPg 162 (261)
T PRK07535 99 S--AEGEKLEVVLPLVKKYNAPVVALTMDDTGIPKDAEDRLAVAKELVEKADEYGIPPEDIYIDPL 162 (261)
T ss_pred C--CCCccCHHHHHHHHHhCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHcCCCHhHEEEeCC
Confidence 0 001123456677788899998888631 1 11234555677787 4555554
No 249
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=30.17 E-value=3.7e+02 Score=27.06 Aligned_cols=111 Identities=14% Similarity=0.034 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccC
Q 009410 214 DELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (535)
Q Consensus 214 ~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 293 (535)
.+.|+.++..+.+.|+++.+-....+.. ...+...+++++.+.++.+.....
T Consensus 57 ~~~L~~~L~~~~~~gIkvI~NaGg~np~----------------------------~~a~~v~eia~e~Gl~lkvA~V~g 108 (362)
T PF07287_consen 57 VRDLRPLLPAAAEKGIKVITNAGGLNPA----------------------------GCADIVREIARELGLSLKVAVVYG 108 (362)
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCCCCHH----------------------------HHHHHHHHHHHhcCCCeeEEEEEC
Confidence 4588999999999999998776433211 123344455667776665555544
Q ss_pred HHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeC
Q 009410 294 MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (535)
Q Consensus 294 ~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgt 366 (535)
.+..+.+..+.+.|..+........+ .+.... .. ..... .....+.++|+.|.-+.|+-
T Consensus 109 Dd~~~~v~~~~~~g~~~~~l~~~~~l--~~~~~~---~~--~a~ay-------lGa~pI~~AL~~GADIVI~G 167 (362)
T PF07287_consen 109 DDLKDEVKELLAEGETIRPLDTGPPL--SEWDDR---IV--SANAY-------LGAEPIVEALEAGADIVITG 167 (362)
T ss_pred ccchHhHHHHHhCCCCCccCCCCCCc--chhccc---cc--eEEEe-------cChHHHHHHHHcCCCEEEeC
Confidence 44446666665555433221111100 000000 00 00000 12367999999999888873
No 250
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=30.14 E-value=7.4e+02 Score=26.84 Aligned_cols=156 Identities=13% Similarity=0.013 Sum_probs=0.0
Q ss_pred hHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEee
Q 009410 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (535)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (535)
.....+.++.+|+..++-.....+. +....++.....+........+.. .+..+.+..-++.+.+.+.|++.+-+-
T Consensus 93 v~~~v~~a~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t~-~p~~~~~~~~~~~~~~~~~Gad~I~i~-- 169 (582)
T TIGR01108 93 VERFVKKAVENGMDVFRIFDALNDPRNLQAAIQAAKKHGAHAQGTISYTT-SPVHTLETYLDLAEELLEMGVDSICIK-- 169 (582)
T ss_pred HHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCEEEEEEEecc-CCCCCHHHHHHHHHHHHHcCCCEEEEC--
Q ss_pred cCCCCcCCHHHHHHHHHHHHhc-CCeEEEEc-CChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcC
Q 009410 206 YKGSFMINDELLIEGFKRCKSL-GALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283 (535)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (535)
.-.-..++..+.+++...++. ++++..|+ .+........-...+.|...+..-..+.-......++..++......+
T Consensus 170 -Dt~G~~~P~~v~~lv~~lk~~~~~pi~~H~Hnt~Gla~An~laAveaGa~~vd~ai~GlG~~tGn~~le~vv~~L~~~g 248 (582)
T TIGR01108 170 -DMAGILTPKAAYELVSALKKRFGLPVHLHSHATTGMAEMALLKAIEAGADGIDTAISSMSGGTSHPPTETMVAALRGTG 248 (582)
T ss_pred -CCCCCcCHHHHHHHHHHHHHhCCCceEEEecCCCCcHHHHHHHHHHhCCCEEEeccccccccccChhHHHHHHHHHhcC
Q ss_pred CCE
Q 009410 284 TPL 286 (535)
Q Consensus 284 ~~~ 286 (535)
..+
T Consensus 249 ~~t 251 (582)
T TIGR01108 249 YDT 251 (582)
T ss_pred CCc
No 251
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=29.53 E-value=5.1e+02 Score=24.82 Aligned_cols=108 Identities=17% Similarity=0.083 Sum_probs=58.7
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---C---hHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---S---LTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (535)
|..+.+.+.......+..||+.+.-.+..+.. + -.+.++...+...+ ...+....+-+..-++.+.++
T Consensus 15 g~iD~~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~~~~------vi~gvg~~~~~~ai~~a~~a~ 88 (279)
T cd00953 15 NKIDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDITDK------VIFQVGSLNLEESIELARAAK 88 (279)
T ss_pred CCcCHHHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHHcCC------EEEEeCcCCHHHHHHHHHHHH
Confidence 55677777777888899999998866544432 2 22222333322211 222232222222233334445
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEc
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (535)
+.|++++-+..-+... ..+++.+.+.+....+ ++++.+.-
T Consensus 89 ~~Gad~v~v~~P~y~~-~~~~~~i~~yf~~v~~-~lpv~iYn 128 (279)
T cd00953 89 SFGIYAIASLPPYYFP-GIPEEWLIKYFTDISS-PYPTFIYN 128 (279)
T ss_pred HcCCCEEEEeCCcCCC-CCCHHHHHHHHHHHHh-cCCEEEEe
Confidence 8899998764432211 1356666666665555 78888763
No 252
>PF01791 DeoC: DeoC/LacD family aldolase; InterPro: IPR002915 This family includes the enzyme deoxyribose-phosphate aldolase, which is involved in nucleotide metabolism. 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde The family also includes a group of related bacterial proteins of unknown function, see examples Q57843 from SWISSPROT and P76143 from SWISSPROT.; GO: 0016829 lyase activity; PDB: 2A4A_A 1VCV_B 1P1X_A 1KTN_B 1JCL_A 1JCJ_A 1MZH_A 3GKF_D 3GLC_L 3GND_N ....
Probab=29.23 E-value=4.7e+02 Score=24.26 Aligned_cols=50 Identities=16% Similarity=0.254 Sum_probs=36.9
Q ss_pred HHHHHHHHHHcCCCEEEEEeecC----CCCcCCHHHHHHHHHHHHhcCCeEEEEc
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHA 235 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~----~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (535)
..++++.. +.|++.+++.+.+. +......+.+.++.++|+++++++.+..
T Consensus 79 ~~~ve~A~-~~GAd~vd~vi~~~~~~~~~~~~~~~~i~~v~~~~~~~gl~vIlE~ 132 (236)
T PF01791_consen 79 VAEVEEAI-RLGADEVDVVINYGALGSGNEDEVIEEIAAVVEECHKYGLKVILEP 132 (236)
T ss_dssp HHHHHHHH-HTT-SEEEEEEEHHHHHTTHHHHHHHHHHHHHHHHHTSEEEEEEEE
T ss_pred HHHHHHHH-HcCCceeeeeccccccccccHHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 45566666 78999999887751 2222346788999999999999999885
No 253
>TIGR03586 PseI pseudaminic acid synthase.
Probab=29.20 E-value=5.5e+02 Score=25.39 Aligned_cols=90 Identities=19% Similarity=0.216 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
.+.+...++.+.+++.|+.+..-+-+...+ +.+...|..... ..... ..-..+++.....+.++.+.-.
T Consensus 74 l~~e~~~~L~~~~~~~Gi~~~stpfd~~sv----d~l~~~~v~~~K---I~S~~----~~n~~LL~~va~~gkPvilstG 142 (327)
T TIGR03586 74 TPWEWHKELFERAKELGLTIFSSPFDETAV----DFLESLDVPAYK---IASFE----ITDLPLIRYVAKTGKPIIMSTG 142 (327)
T ss_pred CCHHHHHHHHHHHHHhCCcEEEccCCHHHH----HHHHHcCCCEEE---ECCcc----ccCHHHHHHHHhcCCcEEEECC
Confidence 456778899999999999998877655443 333334443211 00110 1112344555566888776433
Q ss_pred -cCHHHH-HHHHHHHHcCC-cEEe
Q 009410 292 -MSMDAM-EEIAKARKAGQ-RVIG 312 (535)
Q Consensus 292 -~~~~~~-~~~~~~~~~g~-~v~~ 312 (535)
.+.+++ ..++.+.+.|. .++.
T Consensus 143 ~~t~~Ei~~Av~~i~~~g~~~i~L 166 (327)
T TIGR03586 143 IATLEEIQEAVEACREAGCKDLVL 166 (327)
T ss_pred CCCHHHHHHHHHHHHHCCCCcEEE
Confidence 333332 22334455555 3544
No 254
>PLN02417 dihydrodipicolinate synthase
Probab=29.16 E-value=5.2e+02 Score=24.78 Aligned_cols=111 Identities=12% Similarity=-0.010 Sum_probs=57.9
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHHHHc
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMVKEK 195 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 195 (535)
|..+.+.+......++..||..+.-.+..+.. +..+..+..........-......+....+ .+..+.. +.+++.
T Consensus 17 g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~~~~~~pvi~gv~~~~t~~~i~~a-~~a~~~ 95 (280)
T PLN02417 17 GRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVIGNTGSNSTREAIHAT-EQGFAV 95 (280)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHHhCCCCcEEEECCCccHHHHHHHH-HHHHHc
Confidence 45566777777788899999999855443332 222222222221111111223333333333 3333333 334478
Q ss_pred CCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEE
Q 009410 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (535)
|++.+-+..-+ ....+.+.+.+.++.-.+.. ++.+.
T Consensus 96 Gadav~~~~P~--y~~~~~~~i~~~f~~va~~~-pi~lY 131 (280)
T PLN02417 96 GMHAALHINPY--YGKTSQEGLIKHFETVLDMG-PTIIY 131 (280)
T ss_pred CCCEEEEcCCc--cCCCCHHHHHHHHHHHHhhC-CEEEE
Confidence 99988664332 23346666666665554455 77655
No 255
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=28.92 E-value=5.4e+02 Score=24.89 Aligned_cols=119 Identities=8% Similarity=-0.061 Sum_probs=62.8
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC-hhhHHHHHHHHHHcCCCCcccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN-GDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
+.++.+. +.|++++-+.-+......++.++-+++++.+.+ ...++.+|+.. .....+..+.+.+.|.....-...
T Consensus 30 ~li~~l~-~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~g~~pvi~gv~~~t~~ai~~a~~a~~~Gadav~~~pP 108 (296)
T TIGR03249 30 ENIEWLL-GYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVSTAKGKVPVYTGVGGNTSDAIEIARLAEKAGADGYLLLPP 108 (296)
T ss_pred HHHHHHH-hcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCccHHHHHHHHHHHHHhCCCEEEECCC
Confidence 3334444 688888765444344466788888877776554 34678888743 222333444566677654322111
Q ss_pred cCChhhHHHHHHHHHHHHHhcCCCEEEEEccC-HHHHHHHHHHHH
Q 009410 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS-MDAMEEIAKARK 305 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~-~~~~~~~~~~~~ 305 (535)
......+..-++..-.++...+.++.+.+... .-..+.+..+.+
T Consensus 109 ~y~~~s~~~i~~~f~~v~~a~~~pvilYn~~g~~l~~~~~~~La~ 153 (296)
T TIGR03249 109 YLINGEQEGLYAHVEAVCESTDLGVIVYQRDNAVLNADTLERLAD 153 (296)
T ss_pred CCCCCCHHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHh
Confidence 11111222223333334555577888877432 112366777765
No 256
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=28.80 E-value=5.4e+02 Score=24.82 Aligned_cols=116 Identities=8% Similarity=-0.025 Sum_probs=60.7
Q ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCC-hhhHHHHHHHHHHcCCCCcccccccC
Q 009410 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSR 263 (535)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 263 (535)
++.+. +.|++++-+.-+......++.++-.++++.+.+. ++++.+|+.. .....+..+.+.+.|.....-.....
T Consensus 27 ~~~l~-~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~gv~~~t~~~i~~a~~a~~~Gad~v~~~pP~y 105 (289)
T cd00951 27 VEWLL-SYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLAGAGYGTATAIAYAQAAEKAGADGILLLPPYL 105 (289)
T ss_pred HHHHH-HcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEEecCCCHHHHHHHHHHHHHhCCCEEEECCCCC
Confidence 33444 6788887554443444567877777777655543 5788888743 23333444566677765532111111
Q ss_pred ChhhHHHHHHH-HHHHHHhcCCCEEEEEccCH-HHHHHHHHHHH
Q 009410 264 PPLLEGEATTR-AIRLAEFVNTPLYVVHVMSM-DAMEEIAKARK 305 (535)
Q Consensus 264 ~~~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~ 305 (535)
....+ +.+.+ .-.++...+.++.+.+.... -..+.+.++.+
T Consensus 106 ~~~~~-~~i~~~f~~v~~~~~~pi~lYn~~g~~l~~~~l~~L~~ 148 (289)
T cd00951 106 TEAPQ-EGLYAHVEAVCKSTDLGVIVYNRANAVLTADSLARLAE 148 (289)
T ss_pred CCCCH-HHHHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHh
Confidence 11122 23332 23344555788877764321 12366777765
No 257
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=28.74 E-value=7.8e+02 Score=26.70 Aligned_cols=123 Identities=14% Similarity=0.114 Sum_probs=61.0
Q ss_pred HHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeec
Q 009410 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (535)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (535)
......+..+|+..++-.....+. .....++.....+......+.+.. .+..+.+...++.+.+.+.|++.+-+- +.
T Consensus 100 ~~~v~~a~~~Gid~~rifd~lnd~~~~~~ai~~ak~~G~~~~~~i~yt~-~p~~~~~~~~~~a~~l~~~Gad~i~i~-Dt 177 (593)
T PRK14040 100 ERFVERAVKNGMDVFRVFDAMNDPRNLETALKAVRKVGAHAQGTLSYTT-SPVHTLQTWVDLAKQLEDMGVDSLCIK-DM 177 (593)
T ss_pred HHHHHHHHhcCCCEEEEeeeCCcHHHHHHHHHHHHHcCCeEEEEEEEee-CCccCHHHHHHHHHHHHHcCCCEEEEC-CC
Confidence 344667889999988744211111 233334333333322111122111 111223333344443447788877552 32
Q ss_pred CCCCcCCHHHHHHHHHHHHh-cCCeEEEEcCChhhH-HHHHHHHHHcCCC
Q 009410 207 KGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAV-FEGQKRMIELGIT 254 (535)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~~-~~~~~~~~~~g~~ 254 (535)
.| .+++..+.+++...++ .++++.+|++++... ....-...+.|..
T Consensus 178 ~G--~l~P~~~~~lv~~lk~~~~~pi~~H~Hnt~GlA~An~laAieAGa~ 225 (593)
T PRK14040 178 AG--LLKPYAAYELVSRIKKRVDVPLHLHCHATTGLSTATLLKAIEAGID 225 (593)
T ss_pred CC--CcCHHHHHHHHHHHHHhcCCeEEEEECCCCchHHHHHHHHHHcCCC
Confidence 22 3567788877777664 478899998665332 2222233455543
No 258
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=28.58 E-value=5.3e+02 Score=24.70 Aligned_cols=118 Identities=13% Similarity=0.040 Sum_probs=62.9
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccccCC
Q 009410 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHALSRP 264 (535)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (535)
.++.+. +.|++++-+.........++.++-.++++.+.+..-++.+++. +.....+..+.+.+.|............
T Consensus 25 li~~l~-~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~~~~vi~gvg~~~~~~ai~~a~~a~~~Gad~v~v~~P~y~ 103 (279)
T cd00953 25 HCENLI-SKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDITDKVIFQVGSLNLEESIELARAAKSFGIYAIASLPPYYF 103 (279)
T ss_pred HHHHHH-HcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHHcCCEEEEeCcCCHHHHHHHHHHHHHcCCCEEEEeCCcCC
Confidence 333444 6788887554443445667888888777766654445777764 3344445556667777655432111110
Q ss_pred hhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHHc
Q 009410 265 PLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (535)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~ 306 (535)
...+.+.+.+....... +.++.+.+..... ..+.+.++.+.
T Consensus 104 ~~~~~~~i~~yf~~v~~-~lpv~iYn~P~~tg~~l~~~~l~~L~~~ 148 (279)
T cd00953 104 PGIPEEWLIKYFTDISS-PYPTFIYNYPKATGYDINARMAKEIKKA 148 (279)
T ss_pred CCCCHHHHHHHHHHHHh-cCCEEEEeCccccCCCCCHHHHHHHHhc
Confidence 00112334333333223 7888887754311 23677777653
No 259
>PRK09196 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=28.48 E-value=6.1e+02 Score=25.34 Aligned_cols=105 Identities=10% Similarity=0.063 Sum_probs=65.8
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh-cC-CeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS-LG-ALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~-~g-~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (535)
+.+..+.+-+.+++.+...|--. ..........+.+..++..+.+ .. +|+.+|....... +.+...++.|++++--
T Consensus 27 n~e~~~avi~AAee~~sPvIiq~-s~~~~~~~g~~~~~~~~~~~a~~~~~VPValHLDHg~~~-e~i~~ai~~GftSVMi 104 (347)
T PRK09196 27 NLEQVQAIMEAADETDSPVILQA-SAGARKYAGEPFLRHLILAAVEEYPHIPVVMHQDHGNSP-ATCQRAIQLGFTSVMM 104 (347)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEC-CccHhhhCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCH-HHHHHHHHcCCCEEEe
Confidence 44556666666666666665321 1111122345667777776654 43 8999999655443 3456677789988754
Q ss_pred ccccC-------ChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 259 HALSR-------PPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 259 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
..... |.........+..+++...|..+-
T Consensus 105 DgS~l~~~~~~~p~eENI~~Tkevve~Ah~~Gv~VE 140 (347)
T PRK09196 105 DGSLKADGKTPASYEYNVDVTRKVVEMAHACGVSVE 140 (347)
T ss_pred cCCCCcccCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 44434 666667778899999988887654
No 260
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=28.39 E-value=1.9e+02 Score=24.24 Aligned_cols=47 Identities=21% Similarity=0.238 Sum_probs=32.8
Q ss_pred HHHHHcCCCEEEEEeec-------C-----CCCcCCHHHHHHHHHHHHhcCCeEEEEcC
Q 009410 190 VMVKEKGINSFKFFMAY-------K-----GSFMINDELLIEGFKRCKSLGALAMVHAE 236 (535)
Q Consensus 190 ~~~~~~g~~~ik~~~~~-------~-----~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 236 (535)
+..++.+++.+-++..- + -.+.+..+.+.+++++|++.|+.+.+...
T Consensus 7 ~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~~Dllge~v~a~h~~Girv~ay~~ 65 (132)
T PF14871_consen 7 DTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLKRDLLGEQVEACHERGIRVPAYFD 65 (132)
T ss_pred HHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCCcCHHHHHHHHHHHCCCEEEEEEe
Confidence 33446677776655431 1 12345689999999999999999988863
No 261
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac). It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A.
Probab=28.37 E-value=2.9e+02 Score=25.94 Aligned_cols=70 Identities=17% Similarity=0.190 Sum_probs=35.6
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEE
Q 009410 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (535)
Q Consensus 211 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 290 (535)
.++.+...++.+.|++.|+....=+-+...+ +.+.+.+.....- .... ..-..+++.....+.|+++.-
T Consensus 52 el~~e~~~~L~~~~~~~gi~f~stpfd~~s~----d~l~~~~~~~~KI---aS~d----l~n~~lL~~~A~tgkPvIlST 120 (241)
T PF03102_consen 52 ELSEEQHKELFEYCKELGIDFFSTPFDEESV----DFLEELGVPAYKI---ASGD----LTNLPLLEYIAKTGKPVILST 120 (241)
T ss_dssp SS-HHHHHHHHHHHHHTT-EEEEEE-SHHHH----HHHHHHT-SEEEE----GGG----TT-HHHHHHHHTT-S-EEEE-
T ss_pred cCCHHHHHHHHHHHHHcCCEEEECCCCHHHH----HHHHHcCCCEEEe---cccc----ccCHHHHHHHHHhCCcEEEEC
Confidence 4588999999999999999988776655443 3333334332110 0000 112234555556777776644
Q ss_pred c
Q 009410 291 V 291 (535)
Q Consensus 291 ~ 291 (535)
.
T Consensus 121 G 121 (241)
T PF03102_consen 121 G 121 (241)
T ss_dssp T
T ss_pred C
Confidence 4
No 262
>PLN02858 fructose-bisphosphate aldolase
Probab=28.34 E-value=5.5e+02 Score=31.17 Aligned_cols=105 Identities=10% Similarity=-0.084 Sum_probs=67.9
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+-+..+.+-+.+++.+...|--+ ..........+...-+...|++...||.+|....... +.+...++.|++++-...
T Consensus 1123 n~e~~~avi~aAe~~~sPvIl~~-~~~~~~~~~~~~~~~~~~~a~~~~vpV~lHLDHg~~~-~~i~~ai~~Gf~SVM~Dg 1200 (1378)
T PLN02858 1123 NLEGIEAVVAAAEAEKSPAILQV-HPGALKQGGIPLVSCCIAAAEQASVPITVHFDHGTSK-HELLEALELGFDSVMVDG 1200 (1378)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEC-CccHHhhcCHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHhCCCEEEEeC
Confidence 44555666666656666655321 1111111234455566778888899999999655443 445566677998877666
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
...|.........+..+++...|..+-
T Consensus 1201 S~l~~eeNi~~t~~vv~~Ah~~gv~VE 1227 (1378)
T PLN02858 1201 SHLSFTENISYTKSISSLAHSKGLMVE 1227 (1378)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 667777777778889999988887654
No 263
>COG2108 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only]
Probab=28.32 E-value=5.9e+02 Score=25.10 Aligned_cols=125 Identities=22% Similarity=0.170 Sum_probs=61.2
Q ss_pred eeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeec-------------------c-cccccccccccCCCCchhhhHH
Q 009410 70 IADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPG-------------------G-IDPHTHLAMEFMGSETIDDFFS 129 (535)
Q Consensus 70 ~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPG-------------------l-ID~H~H~~~~~~g~~~~~~~~~ 129 (535)
+.+++..|.+=+. ...++...+...|+.|.-++=| | =|-|.|+... |....++.
T Consensus 53 gkdviyaNErpV~--~~eDii~ea~~~~a~GasiTGGdPl~~ieR~~~~ir~LK~efG~~fHiHLYT~--g~~~~~e~-- 126 (353)
T COG2108 53 GKDVIYANERPVK--SVEDIIEEAKLMDALGASITGGDPLLEIERTVEYIRLLKDEFGEDFHIHLYTT--GILATEEA-- 126 (353)
T ss_pred CCcceeecccccC--cHHHHHHHHHHhccccccccCCChHHHHHHHHHHHHHHHHhhccceeEEEeec--cccCCHHH--
Confidence 5677777776322 1111122244556666555544 2 3578888765 44333332
Q ss_pred HHHHHHhCCcEEEecccc-CCCCChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEE
Q 009410 130 GQAAALAGGTTMHIDFVI-PINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKF 202 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~ 202 (535)
++.....|+--++=+.. +........++. ...+.....+.|+-.+.....++..-++.+++.+.+.+++.+
T Consensus 127 -l~~L~eAGLDEIRfHp~~~~~~~~e~~i~~-l~~A~~~g~dvG~EiPaipg~e~~i~e~~~~~~~~~~~FlNi 198 (353)
T COG2108 127 -LKALAEAGLDEIRFHPPRPGSKSSEKYIEN-LKIAKKYGMDVGVEIPAIPGEEEAILEFAKALDENGLDFLNI 198 (353)
T ss_pred -HHHHHhCCCCeEEecCCCccccccHHHHHH-HHHHHHhCccceeecCCCcchHHHHHHHHHHHHhcccceeee
Confidence 45566778887773321 111112222222 222223445555555555544444445555554556566543
No 264
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=28.30 E-value=2e+02 Score=29.11 Aligned_cols=39 Identities=18% Similarity=0.091 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEc-CChhhHHHHHHHHHHcCCCC
Q 009410 213 NDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITG 255 (535)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~~~~~~~~~~g~~~ 255 (535)
..+.++++++.|++.|+++..|. +....+ +...+.|+..
T Consensus 207 ~~e~i~~~v~~A~~~G~~v~sH~~~~~e~i----~~a~~~Gv~~ 246 (376)
T TIGR02318 207 GLANRSEIAALARARGIPLASHDDDTPEHV----AEAHDLGVTI 246 (376)
T ss_pred cHHHHHHHHHHHHHCCCeEEEecCCCHHHH----HHHHHCCCCh
Confidence 47999999999999999999999 555433 3444456644
No 265
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=27.93 E-value=5.1e+02 Score=24.27 Aligned_cols=93 Identities=14% Similarity=0.073 Sum_probs=56.2
Q ss_pred CCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHH
Q 009410 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 275 (535)
-.+.+|+. +......+.+.+++.++.|+++|+.+..- .+.- .... ....+++.
T Consensus 24 yID~lKfg--~Gt~~l~~~~~l~eki~la~~~~V~v~~G-Gtl~--E~~~----------------------~q~~~~~Y 76 (237)
T TIGR03849 24 YITFVKFG--WGTSALIDRDIVKEKIEMYKDYGIKVYPG-GTLF--EIAH----------------------SKGKFDEY 76 (237)
T ss_pred heeeEEec--CceEeeccHHHHHHHHHHHHHcCCeEeCC-ccHH--HHHH----------------------HhhhHHHH
Confidence 35777763 22223456689999999999999988743 1111 1111 01346667
Q ss_pred HHHHHhcCCCEEEE-----EccCHHHHHHHHHHHHcCCcEEeccc
Q 009410 276 IRLAEFVNTPLYVV-----HVMSMDAMEEIAKARKAGQRVIGEPV 315 (535)
Q Consensus 276 ~~~~~~~~~~~~~~-----H~~~~~~~~~~~~~~~~g~~v~~~~~ 315 (535)
++.++..|...+-. ..+..+-.+.++.+++.|+.+..+..
T Consensus 77 l~~~k~lGf~~IEiS~G~~~i~~~~~~rlI~~~~~~g~~v~~EvG 121 (237)
T TIGR03849 77 LNECDELGFEAVEISDGSMEISLEERCNLIERAKDNGFMVLSEVG 121 (237)
T ss_pred HHHHHHcCCCEEEEcCCccCCCHHHHHHHHHHHHhCCCeEecccc
Confidence 77777777765421 12223344677888888888877654
No 266
>COG4939 Major membrane immunogen, membrane-anchored lipoprotein [Function unknown]
Probab=27.89 E-value=1.8e+02 Score=23.91 Aligned_cols=23 Identities=22% Similarity=0.430 Sum_probs=16.7
Q ss_pred cCCCce-eeeEEEeCCEEEEeeCC
Q 009410 64 NAHHQQ-IADVYVEDGIVVAVQPN 86 (535)
Q Consensus 64 ~~~~~~-~~~I~I~~G~I~~Vg~~ 86 (535)
|..++. .-+|-|+||+|+++.-+
T Consensus 42 Dd~gwk~f~~iti~dGKiv~~~yd 65 (147)
T COG4939 42 DDHGWKAFVTITIQDGKIVACTYD 65 (147)
T ss_pred cccCccceEEEEEeCCEEEEEEee
Confidence 333443 57899999999998643
No 267
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=27.52 E-value=8.2e+02 Score=26.55 Aligned_cols=129 Identities=15% Similarity=0.148 Sum_probs=74.5
Q ss_pred CCchhhhHHHHHHHHhCCcEEEeccccC---------CCCChHHHHHHHHHHhccccccccee----eeeecCChhhHHH
Q 009410 121 SETIDDFFSGQAAALAGGTTMHIDFVIP---------INGSLTAGFEAYEKKAKNSCMDYGFH----MAITKWDEVVSDE 187 (535)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 187 (535)
..+.++....+..+-+.|+.++= +++. ....-++.++...+..++..+..-.. .+.....++..+.
T Consensus 23 r~~~~d~l~ia~~ld~~G~~siE-~~GGatf~~~~~~~~e~p~e~lr~l~~~~~~~~lqml~Rg~n~vg~~~ypddvv~~ 101 (593)
T PRK14040 23 RLRLDDMLPIAAKLDKVGYWSLE-SWGGATFDACIRFLGEDPWERLRELKKAMPNTPQQMLLRGQNLLGYRHYADDVVER 101 (593)
T ss_pred ccCHHHHHHHHHHHHHcCCCEEE-ecCCcchhhhccccCCCHHHHHHHHHHhCCCCeEEEEecCcceeccccCcHHHHHH
Confidence 45666666667777788998763 3211 12245677777777665543322111 1222233444444
Q ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeE---EEEc----CChhhHHHHHHHHHHcCCCC
Q 009410 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALA---MVHA----ENGDAVFEGQKRMIELGITG 255 (535)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v---~~H~----~~~~~~~~~~~~~~~~g~~~ 255 (535)
.-+...+.|.+.+.+|.. .-+.+.+...++.|++.|..+ ..+. .+.+...+..+.+.+.|...
T Consensus 102 ~v~~a~~~Gid~~rifd~-----lnd~~~~~~ai~~ak~~G~~~~~~i~yt~~p~~~~~~~~~~a~~l~~~Gad~ 171 (593)
T PRK14040 102 FVERAVKNGMDVFRVFDA-----MNDPRNLETALKAVRKVGAHAQGTLSYTTSPVHTLQTWVDLAKQLEDMGVDS 171 (593)
T ss_pred HHHHHHhcCCCEEEEeee-----CCcHHHHHHHHHHHHHcCCeEEEEEEEeeCCccCHHHHHHHHHHHHHcCCCE
Confidence 444444889999998742 224578999999999999864 2221 12233445555667777654
No 268
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=27.35 E-value=3.6e+02 Score=25.88 Aligned_cols=110 Identities=8% Similarity=-0.020 Sum_probs=58.4
Q ss_pred CchhhhHHHHHHHHhCCcEEEe-ccccCC--------------CCChHHHHHHHHHHhcccccccceeeeeec------C
Q 009410 122 ETIDDFFSGQAAALAGGTTMHI-DFVIPI--------------NGSLTAGFEAYEKKAKNSCMDYGFHMAITK------W 180 (535)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~-d~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 180 (535)
.+.+......-.+.++|+-.+. |.+-.. ...+.+.++...+.+ +.+-.+..... .
T Consensus 29 ~~t~~~k~yIDfAa~~G~eYvlvD~GW~~~~~~~~~d~~~~~~~~dl~elv~Ya~~Kg----Vgi~lw~~~~~~~~~~~~ 104 (273)
T PF10566_consen 29 ATTETQKRYIDFAAEMGIEYVLVDAGWYGWEKDDDFDFTKPIPDFDLPELVDYAKEKG----VGIWLWYHSETGGNVANL 104 (273)
T ss_dssp SSHHHHHHHHHHHHHTT-SEEEEBTTCCGS--TTT--TT-B-TT--HHHHHHHHHHTT-----EEEEEEECCHTTBHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeccccccccccccccccccCCccCHHHHHHHHHHcC----CCEEEEEeCCcchhhHhH
Confidence 4555566666778899998876 433220 113344444443333 22222221111 2
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
..+..+.+..+ ++.|+.++|+-.-.. ......+..+++++.|.++++.|..|-..
T Consensus 105 ~~~~~~~f~~~-~~~Gv~GvKidF~~~-d~Q~~v~~y~~i~~~AA~~~LmvnfHg~~ 159 (273)
T PF10566_consen 105 EKQLDEAFKLY-AKWGVKGVKIDFMDR-DDQEMVNWYEDILEDAAEYKLMVNFHGAT 159 (273)
T ss_dssp HCCHHHHHHHH-HHCTEEEEEEE--SS-TSHHHHHHHHHHHHHHHHTT-EEEETTS-
T ss_pred HHHHHHHHHHH-HHcCCCEEeeCcCCC-CCHHHHHHHHHHHHHHHHcCcEEEecCCc
Confidence 22233444444 489999999732222 12223677899999999999999999743
No 269
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=27.25 E-value=5.9e+02 Score=24.77 Aligned_cols=112 Identities=10% Similarity=0.005 Sum_probs=59.1
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHH---HHHHHHHhcccccccceeeeeecCChhhHHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAG---FEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (535)
|..+.+.+....+..+.+||-.++-.+..+.. +..+. ++...+... -..+...+....+-+..-++.+.++
T Consensus 20 g~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~---grvpviaG~g~~~t~eai~lak~a~ 96 (299)
T COG0329 20 GSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVG---GRVPVIAGVGSNSTAEAIELAKHAE 96 (299)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHC---CCCcEEEecCCCcHHHHHHHHHHHH
Confidence 55677777788888899999988866554443 22222 222222221 1122223333333333344455556
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEc
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (535)
+.|++++-+..-|...+. ..+.+.-....+...++|+.+.-
T Consensus 97 ~~Gad~il~v~PyY~k~~-~~gl~~hf~~ia~a~~lPvilYN 137 (299)
T COG0329 97 KLGADGILVVPPYYNKPS-QEGLYAHFKAIAEAVDLPVILYN 137 (299)
T ss_pred hcCCCEEEEeCCCCcCCC-hHHHHHHHHHHHHhcCCCEEEEe
Confidence 889999876544332222 23444444444555577776653
No 270
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=26.99 E-value=5.8e+02 Score=24.66 Aligned_cols=112 Identities=13% Similarity=0.075 Sum_probs=57.3
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHHHHc
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMVKEK 195 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 195 (535)
|..+.+.+.......+..||..++-.+..+.. +..+..+..........-......+....+ .+..+..+. +++.
T Consensus 16 g~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~~~~g~~pvi~gv~~~~t~~ai~~a~~-A~~~ 94 (294)
T TIGR02313 16 GDIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAIDQIAGRIPFAPGTGALNHDETLELTKF-AEEA 94 (294)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCCCCcEEEECCcchHHHHHHHHHH-HHHc
Confidence 45666777777788899999988755443332 222222222221111111222233333222 334444444 4478
Q ss_pred CCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhc-CCeEEEE
Q 009410 196 GINSFKFFMAYKGSFMINDELLIEGFK-RCKSL-GALAMVH 234 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~-g~~v~~H 234 (535)
|++.+-+..-+. ...+.+.+.+.+. .+... ++++.+.
T Consensus 95 Gad~v~v~pP~y--~~~~~~~l~~~f~~ia~a~~~lpv~iY 133 (294)
T TIGR02313 95 GADAAMVIVPYY--NKPNQEALYDHFAEVADAVPDFPIIIY 133 (294)
T ss_pred CCCEEEEcCccC--CCCCHHHHHHHHHHHHHhccCCCEEEE
Confidence 999986654332 2334555544443 34555 6887776
No 271
>cd08205 RuBisCO_IV_RLP Ribulose bisphosphate carboxylase like proteins, Rubisco-Form IV. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV, which differ in their taxonomic distribution and subunit composition. Form I-III have Rubisco activity, while Form IV, also called Rubisco-like proteins (RLP), are missing critical active site residues and therefore do not catalyze CO2 fixation. They are believed to utilize a related enzymatic mechanism, but have divergent functions, like for example 2,3-diketo-5-methylthiopentyl-1-phosphate enolase or 5-methyl
Probab=26.97 E-value=5.6e+02 Score=25.81 Aligned_cols=109 Identities=11% Similarity=0.014 Sum_probs=56.8
Q ss_pred CCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccc----cccceeeeeecCChhhHHHHHHHHH
Q 009410 121 SETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSC----MDYGFHMAITKWDEVVSDEMEVMVK 193 (535)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (535)
..+++.+......++..||.-+.|.....+. ...+.++.......... -...+...++....+..+..+.. .
T Consensus 142 gld~~~la~~~~~l~~gGvD~Ikdde~~ge~~~~~~eER~~~v~~av~~a~~~TG~~~~y~~nit~~~~e~i~~a~~a-~ 220 (367)
T cd08205 142 GLSPEELAELAYELALGGIDLIKDDELLADQPYAPFEERVRACMEAVRRANEETGRKTLYAPNITGDPDELRRRADRA-V 220 (367)
T ss_pred CCCHHHHHHHHHHHHhcCCCeeeccccccCcccCCHHHHHHHHHHHHHHHHHhhCCcceEEEEcCCCHHHHHHHHHHH-H
Confidence 3466777777888889999999877544443 33333333333222111 11122222333333444444333 4
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
+.|++.+-+..-+. -...++.+.+ ..+++++.|....
T Consensus 221 ~~Gad~vmv~~~~~-----g~~~~~~l~~---~~~lpi~~H~a~~ 257 (367)
T cd08205 221 EAGANALLINPNLV-----GLDALRALAE---DPDLPIMAHPAFA 257 (367)
T ss_pred HcCCCEEEEecccc-----cccHHHHHHh---cCCCeEEEccCcc
Confidence 78998876543222 1222333333 2389999998654
No 272
>COG3142 CutC Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism]
Probab=26.72 E-value=5.2e+02 Score=24.01 Aligned_cols=110 Identities=17% Similarity=0.135 Sum_probs=65.0
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEc--CChhhHHHHHHHHHHcCCCCcccccccCChhhHHH
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA--ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGE 270 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 270 (535)
++.|..++-+-.-. ....++.+.++++++.|. |+.+..|- ..-....+.++.+.+.|+..+.-+....+......
T Consensus 83 ~~lG~~GVV~G~lt-~dg~iD~~~le~Li~aA~--gL~vTFHrAFD~~~d~~~ale~li~~Gv~RILTsGg~~sa~eg~~ 159 (241)
T COG3142 83 RELGVQGVVLGALT-ADGNIDMPRLEKLIEAAG--GLGVTFHRAFDECPDPLEALEQLIELGVERILTSGGKASALEGLD 159 (241)
T ss_pred HHcCCCcEEEeeec-CCCccCHHHHHHHHHHcc--CCceeeehhhhhcCCHHHHHHHHHHCCCcEEecCCCcCchhhhHH
Confidence 47888887553322 224578999999999877 77888885 22233567788888888876654443333333333
Q ss_pred HHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHH-HHcCCc
Q 009410 271 ATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKA-RKAGQR 309 (535)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~-~~~g~~ 309 (535)
.+.++++. .+.++.+.-....+. +-+..+ ...|+.
T Consensus 160 ~l~~li~~---a~gri~Im~GaGV~~-~N~~~l~~~tg~~ 195 (241)
T COG3142 160 LLKRLIEQ---AKGRIIIMAGAGVRA-ENIAELVLLTGVT 195 (241)
T ss_pred HHHHHHHH---hcCCEEEEeCCCCCH-HHHHHHHHhcCch
Confidence 44444444 445666655555444 334444 445543
No 273
>PF08057 Ery_res_leader2: Erythromycin resistance leader peptide; InterPro: IPR012559 This family consists of erythromycin resistance gene leader peptides. These leader peptides are involved in the transcriptional attenuation control of the synthesis of the macrolide-lincosamide -streptogramin B resistance protein. It acts as a transcriptional attenuator, in contrast to other inducible erm genes. The mRNA leader sequence can fold in either of two mutually exclusive conformations, one of which is postulated to form in the absence of induction, and to contain two rho factor-independent terminators [].; GO: 0046677 response to antibiotic
Probab=26.54 E-value=9.8 Score=17.56 Aligned_cols=10 Identities=50% Similarity=0.667 Sum_probs=6.7
Q ss_pred CcchhhHHHH
Q 009410 1 MIHSMASAFT 10 (535)
Q Consensus 1 ~~~~~~~~~~ 10 (535)
|-|||+..|.
T Consensus 1 mthsmrlrfp 10 (14)
T PF08057_consen 1 MTHSMRLRFP 10 (14)
T ss_pred Cccceeeecc
Confidence 6788876543
No 274
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo. It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A.
Probab=26.29 E-value=49 Score=25.15 Aligned_cols=14 Identities=14% Similarity=0.290 Sum_probs=8.6
Q ss_pred cCCCCccEEEEcCC
Q 009410 434 LVGSDADIIIFNPN 447 (535)
Q Consensus 434 ~~Gk~ADlvvld~~ 447 (535)
.-|.++||+|.|.+
T Consensus 21 ~sgq~~D~~v~d~~ 34 (82)
T PF12690_consen 21 PSGQRYDFVVKDKE 34 (82)
T ss_dssp SSS--EEEEEE-TT
T ss_pred CCCCEEEEEEECCC
Confidence 46899999999643
No 275
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=26.09 E-value=5.9e+02 Score=24.42 Aligned_cols=119 Identities=11% Similarity=0.056 Sum_probs=64.5
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+.........++.++..++++.+.+ .+.++.+++. +.....+..+.+.+.|...+.-..
T Consensus 26 ~~i~~l~-~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~gv~~~st~~~i~~a~~a~~~Gad~v~v~~ 104 (289)
T PF00701_consen 26 RLIDFLI-EAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIAGVGANSTEEAIELARHAQDAGADAVLVIP 104 (289)
T ss_dssp HHHHHHH-HTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEEEEESSSHHHHHHHHHHHHHTT-SEEEEEE
T ss_pred HHHHHHH-HcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEecCcchhHHHHHHHHHHHhhcCceEEEEec
Confidence 3344444 678888765433333456777777777766654 4578888873 445555566667777776543111
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCCCEEEEEccC----HHHHHHHHHHHH
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS----MDAMEEIAKARK 305 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~----~~~~~~~~~~~~ 305 (535)
.......+..-.+..-.++...+.++.+.+... .-..+.+.++.+
T Consensus 105 P~~~~~s~~~l~~y~~~ia~~~~~pi~iYn~P~~tg~~ls~~~l~~L~~ 153 (289)
T PF00701_consen 105 PYYFKPSQEELIDYFRAIADATDLPIIIYNNPARTGNDLSPETLARLAK 153 (289)
T ss_dssp STSSSCCHHHHHHHHHHHHHHSSSEEEEEEBHHHHSSTSHHHHHHHHHT
T ss_pred cccccchhhHHHHHHHHHHhhcCCCEEEEECCCccccCCCHHHHHHHhc
Confidence 111111222233334445566678888777631 112366777765
No 276
>PRK15452 putative protease; Provisional
Probab=26.04 E-value=3.9e+02 Score=27.75 Aligned_cols=50 Identities=18% Similarity=0.107 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCC----CCcCCHHHHHHHHHHHHhcCCeEEEEc
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHA 235 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (535)
.+.++..+ ..|++.+=+-....+ ....+.+.++++++.|+++|.++.+-.
T Consensus 13 ~e~l~aAi-~~GADaVY~G~~~~~~R~~~~~f~~edl~eav~~ah~~g~kvyvt~ 66 (443)
T PRK15452 13 LKNMRYAF-AYGADAVYAGQPRYSLRVRNNEFNHENLALGINEAHALGKKFYVVV 66 (443)
T ss_pred HHHHHHHH-HCCCCEEEECCCccchhhhccCCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 34555555 678887633111111 123466788889999999888876653
No 277
>PRK15447 putative protease; Provisional
Probab=25.51 E-value=6.3e+02 Score=24.56 Aligned_cols=50 Identities=6% Similarity=-0.019 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHcCCCEEEEEeecCC---CCcCCHHHHHHHHHHHHhcCCeEEEEc
Q 009410 184 VSDEMEVMVKEKGINSFKFFMAYKG---SFMINDELLIEGFKRCKSLGALAMVHA 235 (535)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (535)
..+.+-..+.+.|++.+=+ +... ....+.+.+.++++.++++|.++.+-.
T Consensus 16 ~~~~~~~~~~~~gaDaVY~--g~~~~~~R~~f~~~~l~e~v~~~~~~gkkvyva~ 68 (301)
T PRK15447 16 TVRDFYQRAADSPVDIVYL--GETVCSKRRELKVGDWLELAERLAAAGKEVVLST 68 (301)
T ss_pred CHHHHHHHHHcCCCCEEEE--CCccCCCccCCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 3444444454668887633 2211 113688999999999999999987755
No 278
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=25.30 E-value=4.3e+02 Score=24.21 Aligned_cols=98 Identities=12% Similarity=0.113 Sum_probs=56.2
Q ss_pred chhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEE
Q 009410 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKF 202 (535)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~ 202 (535)
+.++......+.+..|++++=-.... ....+.++...+..++..+.-| +-.+ .+.+++.. ..|+.++-
T Consensus 23 ~~e~a~~~a~Ali~gGi~~IEITl~s--p~a~e~I~~l~~~~p~~lIGAG-----TVL~---~~q~~~a~-~aGa~fiV- 90 (211)
T COG0800 23 DVEEALPLAKALIEGGIPAIEITLRT--PAALEAIRALAKEFPEALIGAG-----TVLN---PEQARQAI-AAGAQFIV- 90 (211)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEecCC--CCHHHHHHHHHHhCcccEEccc-----cccC---HHHHHHHH-HcCCCEEE-
Confidence 45555566777889999987422111 1355666666655543222211 2222 24445555 67887762
Q ss_pred EeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHH
Q 009410 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVF 242 (535)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~ 242 (535)
++..-.++++.|..+++++.--+.++.++.
T Consensus 91 ----------sP~~~~ev~~~a~~~~ip~~PG~~TptEi~ 120 (211)
T COG0800 91 ----------SPGLNPEVAKAANRYGIPYIPGVATPTEIM 120 (211)
T ss_pred ----------CCCCCHHHHHHHHhCCCcccCCCCCHHHHH
Confidence 333344567788889999887776665443
No 279
>COG1060 ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only]
Probab=25.23 E-value=7.2e+02 Score=25.10 Aligned_cols=120 Identities=15% Similarity=0.083 Sum_probs=68.3
Q ss_pred CCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceee---e----eecCCh-hhHHHHHHHH
Q 009410 121 SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM---A----ITKWDE-VVSDEMEVMV 192 (535)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~-~~~~~~~~~~ 192 (535)
..+++++....+.+...|+|.+.=.++..+......++...+.....+.+...+. . ...... ...+.++++.
T Consensus 89 ~Ls~eeI~~~~~~~~~~G~~Evli~gG~~p~~~~~y~~~~~~~ik~~~p~~~i~a~s~~ei~~~~~~~~~s~~E~l~~Lk 168 (370)
T COG1060 89 TLSPEEILEEVREAVKRGITEVLIVGGEHPELSLEYYEELFRTIKEEFPDLHIHALSAGEILFLAREGGLSYEEVLKRLK 168 (370)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEEEecCcCCCcchHHHHHHHHHHHHhCcchhhcccCHHHhHHHHhccCCCHHHHHHHHH
Confidence 4578888888888999999999866554444222333333332222111211111 0 000111 1223355555
Q ss_pred HHcCCCEEEEEeec---------CCCCcCCHHHHHHHHHHHHhcCCe-----EEEEcCChhhH
Q 009410 193 KEKGINSFKFFMAY---------KGSFMINDELLIEGFKRCKSLGAL-----AMVHAENGDAV 241 (535)
Q Consensus 193 ~~~g~~~ik~~~~~---------~~~~~~~~~~l~~~~~~a~~~g~~-----v~~H~~~~~~~ 241 (535)
+.|.+.+-.+..- +.+...+.+...++++.|++.|++ ..+|.++....
T Consensus 169 -~aGldsmpg~~aeil~e~vr~~~~p~K~~~~~wle~~~~Ah~lGI~~tatml~Gh~E~~ed~ 230 (370)
T COG1060 169 -EAGLDSMPGGGAEILSEEVRKIHCPPKKSPEEWLEIHERAHRLGIPTTATMLLGHVETREDR 230 (370)
T ss_pred -HcCCCcCcCcceeechHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCccceeEEEecCCHHHH
Confidence 7788776433221 234567889999999999999986 46777775443
No 280
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=25.16 E-value=6.3e+02 Score=24.42 Aligned_cols=105 Identities=14% Similarity=0.093 Sum_probs=67.2
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCc-CCHHHHHHHHHH-HHhcC--CeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFM-INDELLIEGFKR-CKSLG--ALAMVHAENGDAVFEGQKRMIELGITGP 256 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~-~~~~~l~~~~~~-a~~~g--~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (535)
+.+..+.+-+.+++.+...+--. ....... ...+.+..++.. |++.. .|+.+|....... +.+...++.|++++
T Consensus 27 n~e~~~avi~AAe~~~sPvIiq~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~VPV~lHLDHg~~~-e~i~~ai~~GftSV 104 (285)
T PRK07709 27 NLEWTQAILAAAEEEKSPVILGV-SEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSF-EKCKEAIDAGFTSV 104 (285)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEc-CcchhhhcCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCH-HHHHHHHHcCCCEE
Confidence 44555666666656666665322 1111111 344555555554 44445 7999999665443 44456678899888
Q ss_pred ccccccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
--.....|.........+..+++...|..+-
T Consensus 105 M~DgS~lp~eeNi~~Trevv~~Ah~~gv~VE 135 (285)
T PRK07709 105 MIDASHHPFEENVETTKKVVEYAHARNVSVE 135 (285)
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 7666677888788889999999998887654
No 281
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=25.13 E-value=6.2e+02 Score=24.36 Aligned_cols=110 Identities=13% Similarity=-0.017 Sum_probs=57.7
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (535)
+..+.+.+......++..||..+.-.+..+.. +. .+.++...+.... +.....+......+..+.. +.++
T Consensus 16 g~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~---~~pvi~gv~~~t~~~i~~a-~~a~ 91 (289)
T cd00951 16 GSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAG---RVPVLAGAGYGTATAIAYA-QAAE 91 (289)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCC---CCCEEEecCCCHHHHHHHH-HHHH
Confidence 45566777777788899999998855443332 22 2222322222211 1222222332333444433 4445
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
+.|++.+-+..-+. ...+.+.+.+.+. .+...++++.+.-
T Consensus 92 ~~Gad~v~~~pP~y--~~~~~~~i~~~f~~v~~~~~~pi~lYn 132 (289)
T cd00951 92 KAGADGILLLPPYL--TEAPQEGLYAHVEAVCKSTDLGVIVYN 132 (289)
T ss_pred HhCCCEEEECCCCC--CCCCHHHHHHHHHHHHhcCCCCEEEEe
Confidence 88999986643322 2335555554443 3445678887764
No 282
>cd07937 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain. This family includes the carboxyltransferase domains of pyruvate carboxylase (PC) and the transcarboxylase (TC) 5S subunit. Transcarboxylase 5S is a cobalt-dependent metalloenzyme subunit of the biotin-dependent transcarboxylase multienzyme complex. Transcarboxylase 5S transfers carbon dioxide from the 1.3S biotin to pyruvate in the second of two carboxylation reactions catalyzed by TC. The first reaction involves the transfer of carbon dioxide from methylmalonyl-CoA to the 1.3S biotin, and is catalyzed by the 12S subunit. These two steps allow a carboxylate group to be transferred from oxaloacetate to propionyl-CoA to yield pyruvate and methylmalonyl-CoA. The catalytic domain of transcarboxylase 5S has a canonical TIM-barrel fold with a large C-terminal extension that forms a funnel leading to the active site. Transcarboxylase 5S forms a homodimer and there are six dimers per complex
Probab=24.99 E-value=6.1e+02 Score=24.23 Aligned_cols=182 Identities=12% Similarity=-0.047 Sum_probs=0.0
Q ss_pred CCchhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCE
Q 009410 121 SETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (535)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 199 (535)
....+-.....+.+..+|+..++-.....+. .....++.....+........+........+...+..+.+. +.|++.
T Consensus 87 ~~p~~~~~~di~~~~~~g~~~iri~~~~~~~~~~~~~i~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~-~~Ga~~ 165 (275)
T cd07937 87 HYPDDVVELFVEKAAKNGIDIFRIFDALNDVRNLEVAIKAVKKAGKHVEGAICYTGSPVHTLEYYVKLAKELE-DMGADS 165 (275)
T ss_pred CCCcHHHHHHHHHHHHcCCCEEEEeecCChHHHHHHHHHHHHHCCCeEEEEEEecCCCCCCHHHHHHHHHHHH-HcCCCE
Q ss_pred EEEEeecCCCCcCCHHHHHHHHHHHHhc-CCeEEEEc-CChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHH
Q 009410 200 FKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR 277 (535)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (535)
+.+. .-.-..+++.+..++...++. +.++..|+ ++............+.|..-+..-..+.=.-....+++.++.
T Consensus 166 i~l~---DT~G~~~P~~v~~lv~~l~~~~~~~l~~H~Hnd~GlA~aN~laA~~aGa~~vd~sv~GlG~~aGN~~~E~l~~ 242 (275)
T cd07937 166 ICIK---DMAGLLTPYAAYELVKALKKEVGLPIHLHTHDTSGLAVATYLAAAEAGVDIVDTAISPLSGGTSQPSTESMVA 242 (275)
T ss_pred EEEc---CCCCCCCHHHHHHHHHHHHHhCCCeEEEEecCCCChHHHHHHHHHHhCCCEEEEecccccCCcCChhHHHHHH
Q ss_pred HHHhcCCCEEEEEccCHHHHHHHHHHHHc
Q 009410 278 LAEFVNTPLYVVHVMSMDAMEEIAKARKA 306 (535)
Q Consensus 278 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 306 (535)
.....+....+.........+.+..+++.
T Consensus 243 ~L~~~g~~~~~dl~~l~~~~~~v~~~~~~ 271 (275)
T cd07937 243 ALRGTGRDTGLDLEKLEEISEYFEEVRKK 271 (275)
T ss_pred HHHccCCCCCCCHHHHHHHHHHHHHHHHH
No 283
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=24.95 E-value=6.3e+02 Score=24.30 Aligned_cols=113 Identities=11% Similarity=0.022 Sum_probs=57.3
Q ss_pred CCCchhhhHHHHHHHHhC-CcEEEeccccCCCC---ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHc
Q 009410 120 GSETIDDFFSGQAAALAG-GTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEK 195 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~-GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (535)
|..+.+.+......++.. |++.+.-.+..+.. +..+..+..........-......+....+-+..-++.+.+++.
T Consensus 16 g~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~viagv~~~~~~~ai~~a~~a~~~ 95 (288)
T cd00954 16 GEINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIAHVGSLNLKESQELAKHAEEL 95 (288)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEeccCCCCHHHHHHHHHHHHHc
Confidence 455666777777888899 99998765443332 22222222221111111122333333332222223333444588
Q ss_pred CCCEEEEEeecCCCCcCCHHHHHHHHHH-HHhc-CCeEEEE
Q 009410 196 GINSFKFFMAYKGSFMINDELLIEGFKR-CKSL-GALAMVH 234 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~-g~~v~~H 234 (535)
|++.+-+..-+. ...+.+.+.+.++. +... ++++.+.
T Consensus 96 Gad~v~~~~P~y--~~~~~~~i~~~~~~v~~a~~~lpi~iY 134 (288)
T cd00954 96 GYDAISAITPFY--YKFSFEEIKDYYREIIAAAASLPMIIY 134 (288)
T ss_pred CCCEEEEeCCCC--CCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 999986543322 23455555554444 4556 7888875
No 284
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=24.84 E-value=6.5e+02 Score=24.45 Aligned_cols=113 Identities=10% Similarity=-0.049 Sum_probs=57.9
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcC
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKG 196 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 196 (535)
|..+.+.+......++.+||..+.-.+..+.. +..+..+..........-..+...+......+..+..+.. ++.|
T Consensus 23 g~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~t~~~i~~~~~a-~~~G 101 (303)
T PRK03620 23 GSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIAGAGGGTAQAIEYAQAA-ERAG 101 (303)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHHH-HHhC
Confidence 45667777777788889999998865443332 2222222222111111111222222322333444444444 4789
Q ss_pred CCEEEEEeecCCCCcCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009410 197 INSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (535)
Q Consensus 197 ~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H~ 235 (535)
++.+-+..-+. ...+++.+...+.. +...++++.+.-
T Consensus 102 adav~~~pP~y--~~~~~~~i~~~f~~va~~~~lpi~lYn 139 (303)
T PRK03620 102 ADGILLLPPYL--TEAPQEGLAAHVEAVCKSTDLGVIVYN 139 (303)
T ss_pred CCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 99986643322 23355555544443 455678877753
No 285
>TIGR00284 dihydropteroate synthase-related protein. This protein has been found so far only in the Archaea, and in particular in those archaea that lack a bacterial-type dihydropteroate synthase. The central region of this protein shows considerable homology to the amino-terminal half of dihydropteroate synthases, while the carboxyl-terminal region shows homology to the small, uncharacterized protein slr0651 of Synechocystis PCC6803.
Probab=24.41 E-value=8.6e+02 Score=25.72 Aligned_cols=117 Identities=15% Similarity=0.189 Sum_probs=72.9
Q ss_pred hHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc-CCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009410 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
..+....+. +.|++.+-+-... .....+.+..+++..++. +.++++-......+..+++. |..-+..
T Consensus 167 i~~~A~~~~-~~GADIIDIG~~s---t~p~~~~v~~~V~~l~~~~~~pISIDT~~~~v~eaAL~a----GAdiINs---- 234 (499)
T TIGR00284 167 IEGLAARME-RDGADMVALGTGS---FDDDPDVVKEKVKTALDALDSPVIADTPTLDELYEALKA----GASGVIM---- 234 (499)
T ss_pred HHHHHHHHH-HCCCCEEEECCCc---CCCcHHHHHHHHHHHHhhCCCcEEEeCCCHHHHHHHHHc----CCCEEEE----
Confidence 444455555 7899999774322 223455688888888876 78999888877666555543 5332111
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccCH----HHHHHHHHHHHcCC-cEEecccc
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM----DAMEEIAKARKAGQ-RVIGEPVV 316 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~g~-~v~~~~~~ 316 (535)
. +.....+++.+....+.++++.|.... .-.+.++.+.+.|+ .++..|..
T Consensus 235 V----s~~~~d~~~~l~a~~g~~vVlm~~~~~~~~~~l~~~ie~a~~~Gi~~IIlDPgl 289 (499)
T TIGR00284 235 P----DVENAVELASEKKLPEDAFVVVPGNQPTNYEELAKAVKKLRTSGYSKVAADPSL 289 (499)
T ss_pred C----CccchhHHHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHCCCCcEEEeCCC
Confidence 1 112244666777888999999996521 12255677788888 66666653
No 286
>COG2131 ComEB Deoxycytidylate deaminase [Nucleotide transport and metabolism]
Probab=23.88 E-value=1.5e+02 Score=25.88 Aligned_cols=21 Identities=33% Similarity=0.381 Sum_probs=17.4
Q ss_pred eeeeEEEeCCEEEEeeCCCCC
Q 009410 69 QIADVYVEDGIVVAVQPNINV 89 (535)
Q Consensus 69 ~~~~I~I~~G~I~~Vg~~~~~ 89 (535)
+-+.++++|++|.++|-+..+
T Consensus 29 ~VGAvIvkd~rIiatGYNG~p 49 (164)
T COG2131 29 QVGAVIVKDGRIIATGYNGAP 49 (164)
T ss_pred ceeEEEEeCCeEEEeecCCCC
Confidence 468899999999999987553
No 287
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=23.77 E-value=6.7e+02 Score=24.23 Aligned_cols=109 Identities=13% Similarity=0.020 Sum_probs=56.3
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHH---HHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (535)
|..+.+.+......++..||+.+.-.+..+.. +..+ .++...+... . +.....+......+..+..+ .++
T Consensus 21 g~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~-g--~~pvi~gv~~~t~~ai~~a~-~a~ 96 (296)
T TIGR03249 21 GSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVSTAK-G--KVPVYTGVGGNTSDAIEIAR-LAE 96 (296)
T ss_pred CCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHHhC-C--CCcEEEecCccHHHHHHHHH-HHH
Confidence 55677777778888899999998855443332 2222 2222222211 1 12222222222334444443 344
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHHH-HHhcCCeEEEE
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVH 234 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H 234 (535)
+.|++.+-+..-+. ...+.+.+.+.++. +...++++.+.
T Consensus 97 ~~Gadav~~~pP~y--~~~s~~~i~~~f~~v~~a~~~pvilY 136 (296)
T TIGR03249 97 KAGADGYLLLPPYL--INGEQEGLYAHVEAVCESTDLGVIVY 136 (296)
T ss_pred HhCCCEEEECCCCC--CCCCHHHHHHHHHHHHhccCCCEEEE
Confidence 78999986643322 23355555444443 44456787765
No 288
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=23.61 E-value=5e+02 Score=23.57 Aligned_cols=40 Identities=33% Similarity=0.320 Sum_probs=26.9
Q ss_pred HHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeE
Q 009410 189 EVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALA 231 (535)
Q Consensus 189 ~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v 231 (535)
..+.++.|...+|+|.-. | .-..++++++.++|.+.|+.+
T Consensus 141 iaml~dmG~~SiKffPm~-G--l~~leE~~avAkA~a~~g~~l 180 (218)
T PF07071_consen 141 IAMLKDMGGSSIKFFPMG-G--LKHLEELKAVAKACARNGFTL 180 (218)
T ss_dssp HHHHHHTT--EEEE---T-T--TTTHHHHHHHHHHHHHCT-EE
T ss_pred HHHHHHcCCCeeeEeecC-C--cccHHHHHHHHHHHHHcCcee
Confidence 344558999999998532 1 236899999999999999988
No 289
>PRK08227 autoinducer 2 aldolase; Validated
Probab=23.39 E-value=6.6e+02 Score=24.00 Aligned_cols=80 Identities=13% Similarity=0.053 Sum_probs=48.1
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCC-cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCh
Q 009410 187 EMEVMVKEKGINSFKFFMAYKGSF-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPP 265 (535)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~-~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 265 (535)
.+++.+ +.|++.+.+.+...+.. .-..+.+.++.++|+++|+|+.+-..-...+ .
T Consensus 99 sVeeAv-rlGAdAV~~~v~~Gs~~E~~~l~~l~~v~~ea~~~G~Plla~~prG~~~----------------------~- 154 (264)
T PRK08227 99 DMEDAV-RLNACAVAAQVFIGSEYEHQSIKNIIQLVDAGLRYGMPVMAVTAVGKDM----------------------V- 154 (264)
T ss_pred cHHHHH-HCCCCEEEEEEecCCHHHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCc----------------------C-
Confidence 355555 78999988765432211 1124557788899999999988722111000 0
Q ss_pred hhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 266 LLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
.+.+-+..+.+++.+.|..++-+-.
T Consensus 155 -~~~~~ia~aaRiaaELGADiVK~~y 179 (264)
T PRK08227 155 -RDARYFSLATRIAAEMGAQIIKTYY 179 (264)
T ss_pred -chHHHHHHHHHHHHHHcCCEEecCC
Confidence 1123466778888899987654443
No 290
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=22.95 E-value=7.1e+02 Score=24.20 Aligned_cols=116 Identities=8% Similarity=-0.037 Sum_probs=60.9
Q ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC-hhhHHHHHHHHHHcCCCCcccccccC
Q 009410 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSR 263 (535)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 263 (535)
++.+. ..|++++-+..+......++.++-.++++.+.+ .++++.+++.. .....+..+.+.+.|.....-.....
T Consensus 34 i~~l~-~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~t~~~i~~~~~a~~~Gadav~~~pP~y 112 (303)
T PRK03620 34 LEWLA-PYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIAGAGGGTAQAIEYAQAAERAGADGILLLPPYL 112 (303)
T ss_pred HHHHH-HcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHHHHHhCCCEEEECCCCC
Confidence 33333 678888755433333456788887777775543 24778888743 22333344456667765532211111
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH-HHHHHHHHH
Q 009410 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD-AMEEIAKAR 304 (535)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~ 304 (535)
....+..-......++...+.++.+.+..... ..+.+.++.
T Consensus 113 ~~~~~~~i~~~f~~va~~~~lpi~lYn~~g~~l~~~~l~~L~ 154 (303)
T PRK03620 113 TEAPQEGLAAHVEAVCKSTDLGVIVYNRDNAVLTADTLARLA 154 (303)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHH
Confidence 11122222233333455567888887754211 236677776
No 291
>PRK12999 pyruvate carboxylase; Reviewed
Probab=22.82 E-value=1.3e+03 Score=27.37 Aligned_cols=181 Identities=11% Similarity=-0.021 Sum_probs=0.0
Q ss_pred chhhhHHH-HHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceee-----eeecCChhhHHHHHHHHHHc
Q 009410 123 TIDDFFSG-QAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHM-----AITKWDEVVSDEMEVMVKEK 195 (535)
Q Consensus 123 ~~~~~~~~-~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 195 (535)
.++..... .+.+..+|+..++-.....+. .....++.....+......+++.. ..+..+.+..-.+.+.+.+.
T Consensus 624 yp~~v~~~~i~~a~~~Gid~~rifd~lnd~~~~~~~i~~vk~~g~~~~~~i~ytg~~~d~~~~~~~~~~~~~~a~~l~~~ 703 (1146)
T PRK12999 624 YPDNVVRAFVREAAAAGIDVFRIFDSLNWVENMRVAIDAVRETGKIAEAAICYTGDILDPARAKYDLDYYVDLAKELEKA 703 (1146)
T ss_pred CCchHHHHHHHHHHHcCCCEEEEeccCChHHHHHHHHHHHHHcCCeEEEEEEEEecCCCCCCCCCCHHHHHHHHHHHHHc
Q ss_pred CCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc-CCeEEEEc-CChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHH
Q 009410 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 273 (535)
|++.+.+- .-.-.+++....+++...++. ++++..|+ .+........-...+.|...+..-....-......++.
T Consensus 704 Ga~~i~ik---Dt~G~l~P~~~~~lv~~lk~~~~ipi~~H~Hnt~Gla~an~laA~~aGad~vD~av~glg~~tgn~~le 780 (1146)
T PRK12999 704 GAHILAIK---DMAGLLKPAAAYELVSALKEEVDLPIHLHTHDTSGNGLATYLAAAEAGVDIVDVAVASMSGLTSQPSLN 780 (1146)
T ss_pred CCCEEEEC---CccCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCchHHHHHHHHHHhCCCEEEecchhhcCCcCCHHHH
Q ss_pred HHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHc
Q 009410 274 RAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKA 306 (535)
Q Consensus 274 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 306 (535)
.++...+..+...-+......+..+.+..+++.
T Consensus 781 ~vv~~L~~~~~~t~idl~~l~~~s~~~~~~r~~ 813 (1146)
T PRK12999 781 SIVAALEGTERDTGLDLDAIRKLSPYWEAVRPY 813 (1146)
T ss_pred HHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHhH
No 292
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=22.74 E-value=7e+02 Score=24.05 Aligned_cols=110 Identities=10% Similarity=0.009 Sum_probs=57.4
Q ss_pred CCCchhhhHHHHHHHHh-CCcEEEeccccCCCC---ChH---HHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALA-GGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVM 191 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~-~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 191 (535)
|..+.+.+......++. .||..+.-.+..+.. +.. +.++...+... -+.....+....+ .+..+ +.+.
T Consensus 19 g~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~~~---~~~~viagvg~~~t~~ai~-~a~~ 94 (293)
T PRK04147 19 GQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAK---GKVKLIAQVGSVNTAEAQE-LAKY 94 (293)
T ss_pred CCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHHhC---CCCCEEecCCCCCHHHHHH-HHHH
Confidence 55667777777888888 999998855443332 222 22222222221 1122222332222 33333 3344
Q ss_pred HHHcCCCEEEEEeecCCCCcCCHHHHHHHH-HHHHhcCCeEEEEc
Q 009410 192 VKEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (535)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (535)
+++.|++.+-+..-+. ...+.+.+.+-+ +.+...++++.+.-
T Consensus 95 a~~~Gad~v~v~~P~y--~~~~~~~l~~~f~~va~a~~lPv~iYn 137 (293)
T PRK04147 95 ATELGYDAISAVTPFY--YPFSFEEICDYYREIIDSADNPMIVYN 137 (293)
T ss_pred HHHcCCCEEEEeCCcC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 4488999987654332 223445544433 34555678888763
No 293
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=22.71 E-value=5.8e+02 Score=23.53 Aligned_cols=71 Identities=27% Similarity=0.317 Sum_probs=48.4
Q ss_pred HHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHH
Q 009410 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (535)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 269 (535)
.+.++.|...+|+|.-. | .-..++++++.++|.++|+.+ .++. |+ +.
T Consensus 142 aml~dmG~~SiKffPM~-G--l~~leE~~avA~aca~~g~~l---EPTG-------------GI--------------dl 188 (236)
T TIGR03581 142 AMLKDMGGSSVKFFPMG-G--LKHLEEYAAVAKACAKHGFYL---EPTG-------------GI--------------DL 188 (236)
T ss_pred HHHHHcCCCeeeEeecC-C--cccHHHHHHHHHHHHHcCCcc---CCCC-------------Cc--------------cH
Confidence 44458999999998532 1 236889999999999999863 1111 11 13
Q ss_pred HHHHHHHHHHHhcCCCEEEEEccC
Q 009410 270 EATTRAIRLAEFVNTPLYVVHVMS 293 (535)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~H~~~ 293 (535)
+.+.+.++.+...|.+-++.|..+
T Consensus 189 ~Nf~~I~~i~ldaGv~kviPHIYs 212 (236)
T TIGR03581 189 DNFEEIVQIALDAGVEKVIPHVYS 212 (236)
T ss_pred HhHHHHHHHHHHcCCCeeccccce
Confidence 446667777777788877888755
No 294
>COG1242 Predicted Fe-S oxidoreductase [General function prediction only]
Probab=22.31 E-value=7.1e+02 Score=24.00 Aligned_cols=22 Identities=18% Similarity=0.230 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHhcCCeEEEEc
Q 009410 214 DELLIEGFKRCKSLGALAMVHA 235 (535)
Q Consensus 214 ~~~l~~~~~~a~~~g~~v~~H~ 235 (535)
-+.+...+..++++|+.+..|.
T Consensus 167 ~~~y~dav~r~rkrgIkvc~Hi 188 (312)
T COG1242 167 FACYVDAVKRLRKRGIKVCTHL 188 (312)
T ss_pred hHHHHHHHHHHHHcCCeEEEEE
Confidence 3445556666677777777775
No 295
>TIGR03326 rubisco_III ribulose bisphosphate carboxylase, type III. Members of this protein family are the archaeal, single chain, type III form of ribulose bisphosphate carboxylase, or RuBisCO. Members act is a three-step pathway for conversion of the sugar moiety of AMP to two molecules of 3-phosphoglycerate. Many of these species use ADP-dependent sugar kinases, which form AMP, for glycolysis.
Probab=22.23 E-value=8.6e+02 Score=24.96 Aligned_cols=112 Identities=12% Similarity=-0.009 Sum_probs=64.3
Q ss_pred CchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcc----cccccceeeeeecCChhhHHHHHHHHHH
Q 009410 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKN----SCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (535)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (535)
.+++++......+...|+--+-|-..-.+. ...+.+....+...+ ..-...+...++...++..+..+... +
T Consensus 157 lsp~~~a~~~~~~~~GGvD~IKDDE~l~~q~~~p~~eRv~~~~~a~~~a~~eTG~~~~ya~NiT~~~~em~~ra~~~~-~ 235 (412)
T TIGR03326 157 LSTEEHAKVAYELWSGGVDLLKDDENLTSQPFNRFEERVEKLYKVRDKVEAETGERKEYLANITAPVREMERRAELVA-D 235 (412)
T ss_pred CChHHHHHHHHHHHhcCCceeecCCCCCCCCCccHHHHHHHHHHHHHHHHHHhCCcceEEEEecCCHHHHHHHHHHHH-H
Confidence 467777777888899999988875433322 333443333332221 11122233334444444444444433 6
Q ss_pred cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChh
Q 009410 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (535)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~ 239 (535)
.|...+-+-.. ......++.+.+.+...+++++.|.....
T Consensus 236 ~G~~~~mv~~~-----~~G~~~l~~l~~~~~~~~l~ih~Hra~~g 275 (412)
T TIGR03326 236 LGGQYVMVDVV-----VCGWSALQYIRELTEDLGLAIHAHRAMHA 275 (412)
T ss_pred hCCCeEEEEee-----ccchHHHHHHHHhhccCCeEEEEcCCccc
Confidence 78877654322 23456688888777778999999986553
No 296
>TIGR01859 fruc_bis_ald_ fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist. This model represents of one of several subtypes of the class II fructose-1,6-bisphosphate aldolase, an enzyme of glycolysis. The subtypes are split into several models to allow separation of a family of tagatose bisphosphate aldolases. This form is found in Gram-positive bacteria, a variety of Gram-negative, and in amitochondriate protists. The class II enzymes share homology with tagatose bisphosphate aldolase but not with class I aldolase.
Probab=22.18 E-value=7.1e+02 Score=23.98 Aligned_cols=104 Identities=19% Similarity=0.064 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCcEEEe-ccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChh----------hHHHHHHHHHHcC
Q 009410 128 FSGQAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEV----------VSDEMEVMVKEKG 196 (535)
Q Consensus 128 ~~~~~~~l~~GvTtv~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~g 196 (535)
....+.++..|+|+++ |....+.....+......+......+.+..-.+.....++ ..++..+..++.|
T Consensus 87 ~e~i~~ai~~Gf~sVmid~s~l~~~eni~~t~~v~~~a~~~gv~Ve~ElG~~gg~ed~~~g~~~~~t~~eea~~f~~~tg 166 (282)
T TIGR01859 87 YESCIKAIKAGFSSVMIDGSHLPFEENLALTKKVVEIAHAKGVSVEAELGTLGGIEDGVDEKEAELADPDEAEQFVKETG 166 (282)
T ss_pred HHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEeeCCCcCccccccccccccCCHHHHHHHHHHHC
Q ss_pred CCEEEE-----EeecCCCCcCCHHHHHHHHHHHHhcCCeEEEE
Q 009410 197 INSFKF-----FMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (535)
Q Consensus 197 ~~~ik~-----~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (535)
++.+.+ +..+.+.+.++.+.++++.+.. ++|+..|
T Consensus 167 vD~Lavs~Gt~hg~~~~~~~l~~e~L~~i~~~~---~iPlv~h 206 (282)
T TIGR01859 167 VDYLAAAIGTSHGKYKGEPGLDFERLKEIKELT---NIPLVLH 206 (282)
T ss_pred cCEEeeccCccccccCCCCccCHHHHHHHHHHh---CCCEEEE
No 297
>PRK04208 rbcL ribulose bisophosphate carboxylase; Reviewed
Probab=21.99 E-value=9.3e+02 Score=25.22 Aligned_cols=112 Identities=14% Similarity=0.010 Sum_probs=64.6
Q ss_pred CchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcc----cccccceeeeeecC-ChhhHHHHHHHHH
Q 009410 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKN----SCMDYGFHMAITKW-DEVVSDEMEVMVK 193 (535)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 193 (535)
.+++.+......++..|+--+-|-..-.+. ...+.+....+...+ ..-.-.+...++.. ..+..+..+...
T Consensus 173 Lsp~~~a~~~y~~~~GGvD~IKDDE~l~~q~f~p~~~Rv~~~~~a~~~a~~eTG~~k~y~~NiT~~~~~em~~ra~~~~- 251 (468)
T PRK04208 173 LSAKNYGRVVYEALRGGLDFTKDDENLNSQPFNRWRDRFLFVMEAIDKAEAETGERKGHYLNVTAPTMEEMYKRAEFAK- 251 (468)
T ss_pred CCHHHHHHHHHHHHhcCCceeeCCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCcceEEEecCCCCHHHHHHHHHHHH-
Confidence 467777777888899999988875443332 344444433332221 11112233334444 344444444444
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChh
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~ 239 (535)
+.|...+-+-. .......++.+.+.|...+++++.|.....
T Consensus 252 e~G~~~~mv~~-----~~~G~~~l~~l~~~~~~~~l~IhaHrA~~g 292 (468)
T PRK04208 252 ELGSPIVMIDV-----VTAGWTALQSLREWCRDNGLALHAHRAMHA 292 (468)
T ss_pred HhCCCEEEEec-----cccccHHHHHHHHhhhcCCcEEEecCCccc
Confidence 67887765432 223455688888887888999999986543
No 298
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=21.71 E-value=7.7e+02 Score=24.20 Aligned_cols=63 Identities=11% Similarity=0.180 Sum_probs=35.8
Q ss_pred HHHHHhc-CCe-EEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcC
Q 009410 352 LQAALAT-GIL-QLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 425 (535)
Q Consensus 352 ~~~~l~~-Gv~-~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg 425 (535)
+..+.+. |+. +.+|||.-......+ .+.+ ...++.+...+.+. |++-+++=+.+-.|--|.+.
T Consensus 244 I~h~v~~~G~dhVglGsDf~g~~~~p~-----gled-----~~~l~~l~~~L~~~-G~~e~~i~~i~~~N~lRV~~ 308 (313)
T COG2355 244 IDHFVELVGIDHVGLGSDFDGGTGPPD-----GLED-----VGKLPNLTAALIER-GYSEEEIEKIAGENWLRVLK 308 (313)
T ss_pred HHHHHHhcCcceeEecccccCCCCCch-----hhcC-----hhHHHHHHHHHHHc-CCCHHHHHHHHHHhHHHHHH
Confidence 3334443 443 899999533221100 1111 23555666444444 59999998888888777665
No 299
>COG3065 Slp Starvation-inducible outer membrane lipoprotein [Cell envelope biogenesis, outer membrane]
Probab=21.70 E-value=4.1e+02 Score=23.55 Aligned_cols=14 Identities=36% Similarity=0.835 Sum_probs=8.8
Q ss_pred CCCEE--eeccccccc
Q 009410 99 TGKFV--MPGGIDPHT 112 (535)
Q Consensus 99 ~G~~v--lPGlID~H~ 112 (535)
+|++| .+||+|.-.
T Consensus 94 qGRfiAy~~GFlDPv~ 109 (191)
T COG3065 94 QGRFIAYVNGFLDPVN 109 (191)
T ss_pred CceEEEEcccccChhh
Confidence 36665 477777643
No 300
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=21.36 E-value=7.4e+02 Score=23.86 Aligned_cols=118 Identities=12% Similarity=0.104 Sum_probs=60.2
Q ss_pred HHHHHHHH-cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccc
Q 009410 187 EMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 187 ~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
.++.+. . .|++++-+.........++.++-.++++.+.+ ..+++.+++.. .....+..+.+.+.|........
T Consensus 29 li~~l~-~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~~~~~~~viagvg~~~t~~ai~~a~~a~~~Gad~v~v~~ 107 (293)
T PRK04147 29 LVRFNI-EKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAKGKVKLIAQVGSVNTAEAQELAKYATELGYDAISAVT 107 (293)
T ss_pred HHHHHH-hcCCCCEEEECCCccccccCCHHHHHHHHHHHHHHhCCCCCEEecCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 333444 5 67777754333333356677777666665543 24677888743 34444555566777765533211
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
.......+..-.+...+++...+.++.+.+..... ..+.+.++.+
T Consensus 108 P~y~~~~~~~l~~~f~~va~a~~lPv~iYn~P~~tg~~l~~~~l~~L~~ 156 (293)
T PRK04147 108 PFYYPFSFEEICDYYREIIDSADNPMIVYNIPALTGVNLSLDQFNELFT 156 (293)
T ss_pred CcCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhccCCCHHHHHHHhc
Confidence 11111112222333333455567888887654211 2366666664
No 301
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=21.22 E-value=1e+02 Score=21.93 Aligned_cols=32 Identities=19% Similarity=0.182 Sum_probs=21.2
Q ss_pred cccccccccc-CCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 109 DPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 109 D~H~H~~~~~-~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
|.|+|...+. .+..+++++ .+.+.+.|+..+.
T Consensus 1 dlH~Ht~~S~~~~~~~~~~~---~~~a~~~g~~~v~ 33 (67)
T smart00481 1 DLHVHSDYSLLDGALSPEEL---VKRAKELGLKAIA 33 (67)
T ss_pred CCccccCCccccccCCHHHH---HHHHHHcCCCEEE
Confidence 6788886653 344444444 6777888888775
No 302
>cd01733 LSm10 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm10 is an SmD1-like protein which is thought to bind U7 snRNA along with LSm11 and five other Sm subunits to form a 7-member ring structure. LSm10 and the U7 snRNP of which it is a part are thought to play an important role in histone mRNA 3' processing.
Probab=21.13 E-value=2e+02 Score=21.52 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=24.2
Q ss_pred cccEEEEccEEEcCCCc--eeeeEEEeCCEEEEe
Q 009410 52 SSKILIKGGTVVNAHHQ--QIADVYVEDGIVVAV 83 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~--~~~~I~I~~G~I~~V 83 (535)
.+.+.++|+++++.++. .-+.++|++..|..|
T Consensus 42 ~MNl~L~~~~~~~~~~~~~~~~~v~IRG~nI~yI 75 (78)
T cd01733 42 FMNIRLAKVTIIDRNGKQVQVEEIMVTGRNIRYV 75 (78)
T ss_pred CceeEEEEEEEEcCCCceeECCcEEEECCEEEEE
Confidence 46688889888875543 347899999888776
No 303
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion]
Probab=21.05 E-value=2.4e+02 Score=31.30 Aligned_cols=129 Identities=20% Similarity=0.149 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHhcCCeEE-EEcCChhhHHHHHHHHHHcCCCCccccc--ccCChhhHHHHHHHHHHHHHhcCCCEEEEE
Q 009410 214 DELLIEGFKRCKSLGALAM-VHAENGDAVFEGQKRMIELGITGPEGHA--LSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (535)
Q Consensus 214 ~~~l~~~~~~a~~~g~~v~-~H~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 290 (535)
-+.--+++.+|++.|+..+ +..+.+.....-.++ -+.+. ...-+...+.++++.++.++..+...+...
T Consensus 16 gEIAIRvFRAa~ELgi~TVAIys~ED~~S~HR~KA--------DEsY~iG~~~~Pi~aYL~IdeII~iAk~~gaDaIhPG 87 (1149)
T COG1038 16 GEIAIRVFRAANELGIKTVAIYSEEDRLSLHRFKA--------DESYLIGEGKGPVEAYLSIDEIIRIAKRSGADAIHPG 87 (1149)
T ss_pred chhhHHHHHHHHhcCceEEEEeeccccchhhhccc--------cceeeecCCCCchHHhccHHHHHHHHHHcCCCeecCC
Confidence 3556788999999999744 444443221111100 01111 012345557789999999999987654222
Q ss_pred ccC-HHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCC
Q 009410 291 VMS-MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (535)
Q Consensus 291 ~~~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~ 369 (535)
... .+..+..+...+.|+..+ .|.+.++-.-. ....+-..+.++|+++.-|||..
T Consensus 88 YGfLSEn~efA~~c~eaGI~FI-GP~~e~ld~~G-----------------------dKv~Ar~~A~~agvPvipgt~~~ 143 (1149)
T COG1038 88 YGFLSENPEFARACAEAGITFI-GPKPEVLDMLG-----------------------DKVKARNAAIKAGVPVIPGTDGP 143 (1149)
T ss_pred cccccCCHHHHHHHHHcCCEEe-CCCHHHHHHhc-----------------------cHHHHHHHHHHcCCCccCCCCCC
Confidence 211 122366777777886543 34443321100 11133445788999999999966
Q ss_pred CCChh
Q 009410 370 AFNST 374 (535)
Q Consensus 370 ~~~~~ 374 (535)
+...+
T Consensus 144 ~~~~e 148 (1149)
T COG1038 144 IETIE 148 (1149)
T ss_pred cccHH
Confidence 54333
No 304
>PF09890 DUF2117: Uncharacterized protein conserved in archaea (DUF2117); InterPro: IPR012032 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=20.89 E-value=1.3e+02 Score=27.49 Aligned_cols=60 Identities=12% Similarity=0.179 Sum_probs=41.0
Q ss_pred ccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCC---ceEEecCCCEEeeccccccc
Q 009410 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDD---VKVLDATGKFVMPGGIDPHT 112 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~---~~vID~~G~~vlPGlID~H~ 112 (535)
..-++.||.|+-........|+.+||+|++|.-..-...+ -.-+|++..+|==|++==|.
T Consensus 102 GE~I~VNGiVIG~A~s~~V~lvae~G~i~~I~Gg~iK~hGvEKL~~vDL~~A~iKTG~lRr~~ 164 (215)
T PF09890_consen 102 GENIFVNGIVIGRATSSEVTLVAENGKIVDIIGGEIKEHGVEKLGKVDLEKAWIKTGLLRRSP 164 (215)
T ss_pred CCCEEEeeEEEEEEcCCeEEEEEeCCEEEEEECeEechhhhhhccCCChhheEEeccccccCC
Confidence 3457788888865555678999999999998642211111 12388888888888776665
No 305
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=20.81 E-value=4.7e+02 Score=25.89 Aligned_cols=87 Identities=13% Similarity=0.200 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEE-
Q 009410 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH- 290 (535)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H- 290 (535)
++.+.++.+.+.|++.|+.+..-+-+...+ +.+.+.|..... ..... ..-..+++.....+.|+++.-
T Consensus 73 l~~e~~~~L~~~~~~~Gi~~~stpfd~~sv----d~l~~~~v~~~K---IaS~~----~~n~pLL~~~A~~gkPvilStG 141 (329)
T TIGR03569 73 LSEEDHRELKEYCESKGIEFLSTPFDLESA----DFLEDLGVPRFK---IPSGE----ITNAPLLKKIARFGKPVILSTG 141 (329)
T ss_pred CCHHHHHHHHHHHHHhCCcEEEEeCCHHHH----HHHHhcCCCEEE---ECccc----ccCHHHHHHHHhcCCcEEEECC
Confidence 578899999999999999998877655443 333334433211 00110 111234555566788877643
Q ss_pred ccCHHHH-HHHHHHHHcCCc
Q 009410 291 VMSMDAM-EEIAKARKAGQR 309 (535)
Q Consensus 291 ~~~~~~~-~~~~~~~~~g~~ 309 (535)
..+.+++ ..++.+++.|..
T Consensus 142 matl~Ei~~Av~~i~~~G~~ 161 (329)
T TIGR03569 142 MATLEEIEAAVGVLRDAGTP 161 (329)
T ss_pred CCCHHHHHHHHHHHHHcCCC
Confidence 3333322 223344555643
No 306
>PF04457 DUF504: Protein of unknown function (DUF504); InterPro: IPR007547 This is a family of uncharacterised proteins.
Probab=20.80 E-value=2.2e+02 Score=19.78 Aligned_cols=20 Identities=25% Similarity=0.489 Sum_probs=16.2
Q ss_pred CCCCCCCeeEeeEEEEE-EECCEEEEE
Q 009410 462 DTNVYEGRRVKGKVEVT-IAGGRVVWE 487 (535)
Q Consensus 462 ~~~p~~~~~~~~~v~~v-~~~Gr~V~~ 487 (535)
..+|++ +|..+ ..+|++||+
T Consensus 35 ~~IP~H------RI~~ir~~~g~vvw~ 55 (56)
T PF04457_consen 35 TFIPYH------RIVEIRKYDGEVVWD 55 (56)
T ss_pred cCcCCe------eEEEEEecCCcEEEc
Confidence 356775 88888 999999986
No 307
>PLN02858 fructose-bisphosphate aldolase
Probab=20.45 E-value=9e+02 Score=29.45 Aligned_cols=69 Identities=23% Similarity=0.302 Sum_probs=44.3
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cCC-CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YKG-SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~-~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (535)
.++..+++++.|+|.+-+.+. |.+ .+.++.+.++++-+...+.++|++.|-.+.-. .+.++..+..|+.
T Consensus 1252 p~~a~~Fv~~TgvD~LAvaiGt~HG~Y~~~~p~l~~~~l~~i~~~~~~~~vpLVlHGgSG~~-~~~~~~ai~~Gi~ 1326 (1378)
T PLN02858 1252 VDQAKEFIDETGIDALAVCIGNVHGKYPASGPNLRLDLLKELRALSSKKGVLLVLHGASGLP-ESLIKECIENGVR 1326 (1378)
T ss_pred HHHHHHHHHhcCCcEEeeecccccccCCCCCCccCHHHHHHHHHHhcCCCCcEEEeCCCCCC-HHHHHHHHHcCCe
Confidence 355666666779998876553 222 24577888888888776678999999754432 2334444555553
No 308
>PF11068 YlqD: YlqD protein; InterPro: IPR021297 This bacterial family of proteins has no known function. ; PDB: 4DCI_C.
Probab=20.29 E-value=85 Score=26.32 Aligned_cols=19 Identities=21% Similarity=0.389 Sum_probs=15.4
Q ss_pred CCCc---eeeeEEEeCCEEEEe
Q 009410 65 AHHQ---QIADVYVEDGIVVAV 83 (535)
Q Consensus 65 ~~~~---~~~~I~I~~G~I~~V 83 (535)
|+++ -+..|+|+||+|.+|
T Consensus 109 GD~~~~~m~~EIvvkDG~V~eI 130 (131)
T PF11068_consen 109 GDNWIEKMGVEIVVKDGKVIEI 130 (131)
T ss_dssp TSBHHHHSTEEEEEETTEEEEE
T ss_pred CCChHHhcCcEEEEECCEEEEe
Confidence 5554 278999999999987
No 309
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=20.23 E-value=7.9e+02 Score=23.74 Aligned_cols=112 Identities=13% Similarity=-0.011 Sum_probs=59.1
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHH---hcCCeEEEEcCCh--hhHHHHHHHHHHcCCCCcccccccCChhhH
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCK---SLGALAMVHAENG--DAVFEGQKRMIELGITGPEGHALSRPPLLE 268 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~---~~g~~v~~H~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 268 (535)
..|++++-+.-+......++.++-.++++.+. +.+.++.+|+... ....+..+...+.|.....-.........+
T Consensus 32 ~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~~~~g~~pvi~gv~~~~t~~ai~~a~~A~~~Gad~v~v~pP~y~~~~~ 111 (294)
T TIGR02313 32 EGGSHAISVGGTSGEPGSLTLEERKQAIENAIDQIAGRIPFAPGTGALNHDETLELTKFAEEAGADAAMVIVPYYNKPNQ 111 (294)
T ss_pred HcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCCCCcEEEECCcchHHHHHHHHHHHHHcCCCEEEEcCccCCCCCH
Confidence 67888765433333345677777776666543 3357888887443 333444455666776543221111111122
Q ss_pred HHHHHHHHHHHHhc-CCCEEEEEccCHH----HHHHHHHHHH
Q 009410 269 GEATTRAIRLAEFV-NTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 269 ~~~~~~~~~~~~~~-~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
..-+.....++... +.++.+.+..... ..+.+.++.+
T Consensus 112 ~~l~~~f~~ia~a~~~lpv~iYn~P~~tg~~l~~~~l~~L~~ 153 (294)
T TIGR02313 112 EALYDHFAEVADAVPDFPIIIYNIPGRAAQEIAPKTMARLRK 153 (294)
T ss_pred HHHHHHHHHHHHhccCCCEEEEeCchhcCcCCCHHHHHHHHh
Confidence 22233333445566 7888887654321 2367777764
No 310
>COG2108 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only]
Probab=20.12 E-value=7.5e+02 Score=24.41 Aligned_cols=92 Identities=18% Similarity=0.094 Sum_probs=53.9
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHH-hcCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccccCChhhHHH
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCK-SLGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALSRPPLLEGE 270 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~-~~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 270 (535)
..++.+..+. .|.+....+....+++..+ +.|-.+++|..+ .....+.++.+.+.|+.-++-|.. +|..-..+
T Consensus 76 ~~~a~GasiT---GGdPl~~ieR~~~~ir~LK~efG~~fHiHLYT~g~~~~~e~l~~L~eAGLDEIRfHp~-~~~~~~~e 151 (353)
T COG2108 76 LMDALGASIT---GGDPLLEIERTVEYIRLLKDEFGEDFHIHLYTTGILATEEALKALAEAGLDEIRFHPP-RPGSKSSE 151 (353)
T ss_pred Hhcccccccc---CCChHHHHHHHHHHHHHHHHhhccceeEEEeeccccCCHHHHHHHHhCCCCeEEecCC-CccccccH
Confidence 3445554442 2233334444444444444 347788999855 444567788888899998887775 44444444
Q ss_pred HHHHHHHHHHhcCCCEEEE
Q 009410 271 ATTRAIRLAEFVNTPLYVV 289 (535)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~ 289 (535)
...+.+..+...+..+-+.
T Consensus 152 ~~i~~l~~A~~~g~dvG~E 170 (353)
T COG2108 152 KYIENLKIAKKYGMDVGVE 170 (353)
T ss_pred HHHHHHHHHHHhCccceee
Confidence 5556666666666555443
No 311
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated
Probab=20.09 E-value=8.6e+02 Score=24.12 Aligned_cols=102 Identities=9% Similarity=-0.034 Sum_probs=54.0
Q ss_pred HHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCC
Q 009410 131 QAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (535)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (535)
...+..+|+..++-....... .....++.....+.. +.+.... ....+.+...++.+...+.|++.+-+ .+..|
T Consensus 94 l~~a~~~gvd~iri~~~~~e~~~~~~~i~~ak~~G~~--v~~~l~~-a~~~~~e~l~~~a~~~~~~Ga~~i~i-~DT~G- 168 (337)
T PRK08195 94 LKMAYDAGVRVVRVATHCTEADVSEQHIGLARELGMD--TVGFLMM-SHMAPPEKLAEQAKLMESYGAQCVYV-VDSAG- 168 (337)
T ss_pred HHHHHHcCCCEEEEEEecchHHHHHHHHHHHHHCCCe--EEEEEEe-ccCCCHHHHHHHHHHHHhCCCCEEEe-CCCCC-
Confidence 567788999987743211111 222333333332221 1111111 22233333333334344778887754 23223
Q ss_pred CcCCHHHHHHHHHHHHhc---CCeEEEEcCCh
Q 009410 210 FMINDELLIEGFKRCKSL---GALAMVHAENG 238 (535)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~---g~~v~~H~~~~ 238 (535)
.+.++.+.+++...++. ++++..|..+.
T Consensus 169 -~~~P~~v~~~v~~l~~~l~~~i~ig~H~Hnn 199 (337)
T PRK08195 169 -ALLPEDVRDRVRALRAALKPDTQVGFHGHNN 199 (337)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 35788888888888765 68899998655
No 312
>PF06115 DUF956: Domain of unknown function (DUF956); InterPro: IPR010360 This is a family of bacterial sequences with undetermined function.
Probab=20.06 E-value=1.3e+02 Score=24.51 Aligned_cols=70 Identities=14% Similarity=0.140 Sum_probs=40.4
Q ss_pred HHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCC
Q 009410 418 TECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGS 497 (535)
Q Consensus 418 ~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~ 497 (535)
..+-..+|+. ..|.|-.|-.|== .++.. .....--+||+.. ..-...|+..|+++.+ -.+.+. ..
T Consensus 13 ~~ats~~g~~-~yGkimiGDkaFE-Fyn~~---------n~~dyIQIPW~eI--~~V~a~V~fkgk~I~R-F~I~Tk-~~ 77 (118)
T PF06115_consen 13 TKATSYLGLG-KYGKIMIGDKAFE-FYNDR---------NVEDYIQIPWEEI--DYVIASVSFKGKWIPR-FAIFTK-KN 77 (118)
T ss_pred EeeEEEeccc-ccCeEEEcccceE-eecCC---------ChhhcEEeChhhe--eEEEEEEEECCCEEee-EEEEEC-CC
Confidence 3444567773 7787777766521 22221 1122223588766 3456678889999988 565553 34
Q ss_pred ceEee
Q 009410 498 GKYIE 502 (535)
Q Consensus 498 ~~~~~ 502 (535)
|.+..
T Consensus 78 G~f~F 82 (118)
T PF06115_consen 78 GKFTF 82 (118)
T ss_pred CEEEE
Confidence 66554
No 313
>TIGR01521 FruBisAldo_II_B fructose-bisphosphate aldolase, class II, Calvin cycle subtype. Members of this family are class II examples of the enzyme fructose-bisphosphate aldolase, an enzyme both of glycolysis and (in the opposite direction) of the Calvin cycle of CO2 fixation. A deep split separates the tightly conserved yeast/E. coli/Mycobacterium subtype (all species lacking the Calvin cycle) represented by model TIGR01520 from a broader group of aldolases that includes both tagatose- and fructose-bisphosphate aldolases. This model represents a distinct, elongated, very well conserved subtype within the latter group. Most species with this aldolase subtype have the Calvin cycle.
Probab=20.04 E-value=8.8e+02 Score=24.21 Aligned_cols=105 Identities=11% Similarity=0.039 Sum_probs=64.3
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHH-hcC-CeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCK-SLG-ALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~-~~g-~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (535)
+.+..+.+-+.+++.+...|-.. ..........+.+..++..+. +.. +|+.+|....... +.+...++.|++++--
T Consensus 25 n~e~~~aii~AAEe~~sPvIlq~-s~~~~~~~g~~~~~~~~~~~ae~~~~VPValHLDHg~~~-e~i~~Ai~~GFtSVMi 102 (347)
T TIGR01521 25 NMEQMRAIMEAADKTDSPVILQA-SRGARSYAGAPFLRHLILAAIEEYPHIPVVMHQDHGNSP-ATCQRAIQLGFTSVMM 102 (347)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEC-CcchhhhCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCH-HHHHHHHHcCCCEEee
Confidence 44556666666666666665322 111111234555666665444 553 8999999665443 4556667889988754
Q ss_pred ccccC-------ChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 259 HALSR-------PPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 259 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
..... |.........+..+++...|..+-
T Consensus 103 DgS~l~~~~~~~p~eENI~~Tkevve~Ah~~GvsVE 138 (347)
T TIGR01521 103 DGSLREDAKTPADYDYNVRVTAEVVAFAHAVGASVE 138 (347)
T ss_pred cCcCCcccCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 44433 666677778899999988776543
Done!