Query 009410
Match_columns 535
No_of_seqs 214 out of 1864
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 04:34:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009410.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009410hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dc8_A Dihydropyrimidinase; TI 100.0 5.6E-62 1.9E-66 507.5 41.9 461 54-517 2-466 (490)
2 3sfw_A Dihydropyrimidinase; hy 100.0 5.2E-59 1.8E-63 484.4 44.4 453 54-508 2-460 (461)
3 2ftw_A Dihydropyrimidine amido 100.0 9.4E-57 3.2E-61 473.8 44.7 470 52-521 7-482 (521)
4 1gkp_A Hydantoinase; hydrolase 100.0 6.1E-56 2.1E-60 462.1 43.4 450 55-506 2-456 (458)
5 2fty_A Dihydropyrimidinase; al 100.0 7.1E-56 2.4E-60 468.5 41.5 451 53-505 3-521 (559)
6 3e74_A Allantoinase; (beta/alp 100.0 8.4E-56 2.9E-60 460.0 41.3 438 50-504 20-471 (473)
7 2vr2_A Dihydropyrimidinase; hy 100.0 2.8E-55 9.7E-60 464.3 43.1 467 52-518 26-503 (541)
8 2vm8_A Dihydropyrimidinase-rel 100.0 2.3E-55 7.9E-60 462.5 41.8 467 52-518 25-498 (501)
9 1nfg_A D-hydantoinase; TIM bar 100.0 2E-53 6.8E-58 443.0 42.4 449 54-507 2-456 (457)
10 3hm7_A Allantoinase; metallo-d 100.0 3.5E-53 1.2E-57 439.6 39.0 426 52-490 5-441 (448)
11 1gkr_A Hydantoinase, non-ATP d 100.0 1.3E-52 4.4E-57 437.0 40.4 445 53-507 2-455 (458)
12 3gri_A Dihydroorotase, dhoase; 100.0 2.9E-52 1E-56 428.9 32.1 417 55-490 2-424 (424)
13 3mpg_A Dihydroorotase, dhoase; 100.0 4.6E-51 1.6E-55 421.1 29.8 419 54-492 2-427 (428)
14 2gwn_A Dihydroorotase; zinc-bi 100.0 9.8E-49 3.4E-53 406.2 33.8 431 53-503 4-450 (452)
15 2z00_A Dihydroorotase; zinc bi 100.0 2.2E-46 7.6E-51 386.2 35.1 408 55-490 2-426 (426)
16 1xrt_A Dihydroorotase, dhoase; 100.0 7.5E-46 2.6E-50 386.4 33.3 414 52-488 46-467 (467)
17 3lnp_A Amidohydrolase family p 100.0 3.6E-40 1.2E-44 344.0 35.0 380 50-495 20-448 (468)
18 4f0r_A 5-methylthioadenosine/S 100.0 1.2E-40 4.1E-45 345.6 30.5 380 50-495 3-421 (447)
19 3gnh_A L-lysine, L-arginine ca 100.0 2.4E-40 8.3E-45 338.5 29.0 352 53-487 2-402 (403)
20 3h4u_A Amidohydrolase; signatu 100.0 6E-40 2.1E-44 343.3 30.7 379 52-495 28-459 (479)
21 3feq_A Putative amidohydrolase 100.0 2.5E-40 8.4E-45 340.7 26.4 361 52-494 3-417 (423)
22 2r8c_A Putative amidohydrolase 100.0 1.9E-40 6.5E-45 341.8 25.2 366 53-494 4-420 (426)
23 4dyk_A Amidohydrolase; adenosi 100.0 7.2E-40 2.5E-44 340.1 28.7 377 50-495 5-423 (451)
24 4dzh_A Amidohydrolase; adenosi 100.0 8E-40 2.7E-44 341.4 27.8 375 52-495 13-430 (472)
25 3gip_A N-acyl-D-glutamate deac 100.0 8E-39 2.7E-43 333.6 32.2 397 50-504 4-479 (480)
26 3ls9_A Triazine hydrolase; atr 100.0 8.5E-39 2.9E-43 332.5 31.1 375 55-495 2-440 (456)
27 2paj_A Putative cytosine/guani 100.0 2.9E-38 9.9E-43 331.7 28.3 377 52-495 9-463 (492)
28 2ood_A BLR3880 protein; PSI-II 100.0 1E-38 3.4E-43 333.1 21.5 384 51-490 1-468 (475)
29 3be7_A Zn-dependent arginine c 100.0 1.2E-36 4.2E-41 311.6 31.0 350 50-489 3-402 (408)
30 2i9u_A Cytosine/guanine deamin 100.0 2.8E-37 9.4E-42 319.5 25.6 374 52-490 8-431 (439)
31 2qt3_A N-isopropylammelide iso 100.0 2.9E-36 9.8E-41 308.3 32.2 352 52-492 4-402 (403)
32 2p9b_A Possible prolidase; pro 100.0 1.6E-37 5.4E-42 323.0 21.5 365 52-494 12-441 (458)
33 1rk6_A D-aminoacylase; TIM bar 100.0 2E-36 6.7E-41 317.5 30.0 392 53-504 21-494 (496)
34 2qs8_A XAA-Pro dipeptidase; am 100.0 1.5E-35 5E-40 304.6 33.6 348 52-487 6-412 (418)
35 4aql_A Guanine deaminase; hydr 100.0 1.7E-36 5.9E-41 315.7 25.2 383 52-490 30-474 (476)
36 2ogj_A Dihydroorotase; TIM bar 100.0 1.3E-36 4.6E-41 312.1 21.1 353 50-495 12-397 (417)
37 2bb0_A Imidazolonepropionase; 100.0 4E-35 1.4E-39 301.6 31.9 348 53-492 5-420 (421)
38 3hpa_A Amidohydrolase; signatu 100.0 3.3E-35 1.1E-39 306.7 30.6 382 52-495 28-459 (479)
39 2q09_A Imidazolonepropionase; 100.0 1.9E-35 6.4E-40 303.5 27.2 346 53-489 5-409 (416)
40 2ics_A Adenine deaminase; TIM 100.0 2.5E-36 8.7E-41 306.1 20.4 354 52-490 4-374 (379)
41 1ra0_A Cytosine deaminase; alp 100.0 8.8E-36 3E-40 307.3 24.4 368 52-494 7-417 (430)
42 2vun_A Enamidase; nicotinate d 100.0 2.2E-34 7.4E-39 292.7 32.8 351 53-493 2-377 (386)
43 1p1m_A Hypothetical protein TM 100.0 1.4E-36 4.7E-41 311.0 14.8 354 55-495 1-388 (406)
44 1e9y_B Urease subunit beta; hy 100.0 2.7E-35 9.1E-40 309.7 22.1 362 52-494 65-466 (569)
45 2puz_A Imidazolonepropionase; 100.0 4.1E-34 1.4E-38 293.9 29.3 342 52-486 14-418 (419)
46 4f0l_A Amidohydrolase; ssgcid, 100.0 2E-34 6.7E-39 299.7 23.6 365 53-492 12-440 (458)
47 3v7p_A Amidohydrolase family p 100.0 2.6E-35 8.9E-40 302.8 16.4 371 55-495 2-412 (427)
48 3pnu_A Dihydroorotase; TIM bar 100.0 7.6E-35 2.6E-39 287.9 18.9 321 99-476 22-358 (359)
49 3nqb_A Adenine deaminase 2; PS 100.0 5.3E-33 1.8E-37 295.1 29.6 331 52-494 34-380 (608)
50 3ooq_A Amidohydrolase; structu 100.0 6E-33 2.1E-37 282.8 28.6 344 52-490 4-390 (396)
51 4ac7_C Urease subunit alpha; h 100.0 6.2E-34 2.1E-38 294.4 21.3 347 52-488 66-460 (570)
52 4ubp_C Protein (urease (chain 100.0 6.2E-34 2.1E-38 294.4 20.5 343 52-488 66-460 (570)
53 3mdu_A N-formimino-L-glutamate 100.0 1.5E-33 5.2E-38 292.1 20.3 361 57-492 4-435 (453)
54 1yrr_A N-acetylglucosamine-6-p 100.0 2.5E-33 8.5E-38 284.3 20.0 350 55-488 2-382 (382)
55 4gy7_A Urease; JACK bean, hydr 100.0 6.2E-34 2.1E-38 308.7 14.7 367 51-493 335-736 (840)
56 2vhl_A N-acetylglucosamine-6-p 100.0 5.4E-32 1.8E-36 275.9 26.3 363 51-492 1-394 (396)
57 1onw_A Isoaspartyl dipeptidase 100.0 5.5E-31 1.9E-35 267.9 30.7 352 53-493 8-383 (390)
58 3icj_A Uncharacterized metal-d 100.0 1.8E-31 6E-36 279.2 24.5 329 54-453 37-506 (534)
59 2imr_A Hypothetical protein DR 100.0 2.1E-32 7.1E-37 281.0 17.2 343 52-448 36-418 (420)
60 3mtw_A L-arginine carboxypepti 100.0 1.3E-30 4.3E-35 263.1 27.7 352 54-485 3-400 (403)
61 2z26_A Dihydroorotase, dhoase; 100.0 3.4E-31 1.2E-35 263.7 19.4 328 99-476 4-346 (347)
62 3iv8_A N-acetylglucosamine-6-p 100.0 5.4E-30 1.9E-34 254.6 23.5 109 55-163 5-117 (381)
63 4ep8_C Urease subunit alpha; a 100.0 3.4E-32 1.2E-36 289.5 4.9 371 51-487 63-455 (566)
64 3mkv_A Putative amidohydrolase 100.0 1.4E-29 4.7E-34 256.9 22.2 354 52-487 3-413 (426)
65 1o12_A N-acetylglucosamine-6-p 99.9 2E-25 6.8E-30 225.0 19.1 323 69-489 28-376 (376)
66 3ggm_A Uncharacterized protein 99.6 8.4E-15 2.9E-19 112.1 8.1 66 52-117 3-73 (81)
67 1bf6_A Phosphotriesterase homo 99.2 9.8E-10 3.4E-14 106.1 18.2 257 106-425 6-291 (291)
68 2ob3_A Parathion hydrolase; me 99.1 3.6E-09 1.2E-13 103.7 19.8 275 106-425 16-325 (330)
69 1zzm_A Putative deoxyribonucle 99.0 4.8E-08 1.7E-12 92.4 21.2 243 107-426 5-258 (259)
70 2vc7_A Aryldialkylphosphatase; 99.0 1.8E-08 6.1E-13 98.4 17.5 264 106-425 17-314 (314)
71 2y1h_A Putative deoxyribonucle 98.9 4.2E-07 1.4E-11 86.6 23.9 241 106-427 5-266 (272)
72 3rcm_A TATD family hydrolase; 98.8 2.6E-07 8.9E-12 88.1 19.0 251 107-427 3-265 (287)
73 3ovg_A Amidohydrolase; structu 98.8 2.2E-07 7.5E-12 91.3 18.8 279 106-441 21-344 (363)
74 1xwy_A DNAse TATD, deoxyribonu 98.7 1.1E-06 3.8E-11 83.2 20.7 247 107-426 5-262 (264)
75 3k2g_A Resiniferatoxin-binding 98.7 1.3E-06 4.3E-11 86.2 20.7 247 129-427 90-355 (364)
76 3rhg_A Putative phophotriester 98.6 2.2E-06 7.4E-11 84.5 20.0 246 129-428 79-346 (365)
77 3pnz_A Phosphotriesterase fami 98.6 5.3E-07 1.8E-11 87.6 15.1 262 106-426 17-328 (330)
78 2pgf_A Adenosine deaminase; me 98.6 2.3E-07 8E-12 92.2 11.5 145 214-427 214-359 (371)
79 1yix_A Deoxyribonuclease YCFH; 98.5 2.6E-06 8.7E-11 80.7 16.6 246 107-427 3-257 (265)
80 3tn4_A Phosphotriesterase; lac 98.5 5.1E-06 1.7E-10 81.4 18.6 264 106-424 52-358 (360)
81 3gtx_A Organophosphorus hydrol 98.5 4.7E-06 1.6E-10 81.4 18.2 268 106-425 32-339 (339)
82 3gg7_A Uncharacterized metallo 98.5 2.2E-06 7.7E-11 79.9 14.9 233 107-426 3-244 (254)
83 3rys_A Adenosine deaminase 1; 98.4 1.3E-05 4.3E-10 78.3 17.9 158 195-427 163-321 (343)
84 3ipw_A Hydrolase TATD family p 98.4 1.2E-05 4.2E-10 77.5 17.2 253 106-427 27-323 (325)
85 4i6k_A Amidohydrolase family p 98.4 1.2E-05 4.2E-10 77.2 17.0 129 103-237 23-159 (294)
86 2gzx_A Putative TATD related D 98.3 2.6E-05 8.9E-10 73.7 17.7 244 107-427 2-256 (265)
87 2xio_A Putative deoxyribonucle 98.3 3.7E-06 1.3E-10 81.2 11.8 127 106-237 2-149 (301)
88 1j6o_A TATD-related deoxyribon 98.2 1.9E-05 6.7E-10 74.7 14.5 244 107-427 13-266 (268)
89 3iar_A Adenosine deaminase; pu 98.2 2.4E-05 8.2E-10 76.9 15.2 141 215-427 192-333 (367)
90 3pao_A Adenosine deaminase; st 98.2 2E-06 6.9E-11 83.4 6.6 156 196-426 161-317 (326)
91 3cjp_A Predicted amidohydrolas 98.2 6.2E-05 2.1E-09 71.4 16.8 160 183-427 102-265 (272)
92 2ffi_A 2-pyrone-4,6-dicarboxyl 98.1 2.5E-05 8.7E-10 74.8 13.6 127 106-238 13-147 (288)
93 2dvt_A Thermophilic reversible 98.0 0.00013 4.6E-09 71.0 15.8 55 183-237 108-167 (327)
94 3guw_A Uncharacterized protein 97.9 0.00022 7.6E-09 66.8 14.4 117 107-237 2-132 (261)
95 4d9a_A 2-pyrone-4,6-dicarbaxyl 97.8 0.00053 1.8E-08 65.9 15.8 152 102-293 22-183 (303)
96 2f6k_A Metal-dependent hydrola 97.8 0.00074 2.5E-08 65.0 16.9 56 182-238 103-158 (307)
97 3e2v_A 3'-5'-exonuclease; stru 97.4 0.0042 1.4E-07 61.2 16.2 132 105-238 12-206 (401)
98 4do7_A Amidohydrolase 2; enzym 97.4 0.00081 2.8E-08 64.7 10.6 128 107-238 5-145 (303)
99 3irs_A Uncharacterized protein 97.2 0.0085 2.9E-07 57.1 15.2 227 129-431 51-285 (291)
100 4gxw_A Adenosine deaminase; am 97.1 0.0019 6.4E-08 63.8 10.2 161 196-427 181-342 (380)
101 2hbv_A 2-amino-3-carboxymucona 96.9 0.066 2.2E-06 51.9 18.8 53 183-237 128-180 (334)
102 2wm1_A 2-amino-3-carboxymucona 96.8 0.041 1.4E-06 53.4 16.6 54 183-237 124-177 (336)
103 2a3l_A AMP deaminase, AMPD; at 96.8 0.00086 3E-08 70.8 4.5 101 288-427 541-642 (701)
104 3ij6_A Uncharacterized metal-d 96.4 0.037 1.3E-06 53.2 12.8 54 183-237 111-164 (312)
105 3nur_A Amidohydrolase; TIM bar 96.2 0.12 4.2E-06 50.5 15.6 56 182-238 141-196 (357)
106 3lgd_A Adenosine deaminase CEC 95.8 0.038 1.3E-06 56.3 10.4 108 213-369 307-417 (508)
107 3qy7_A Tyrosine-protein phosph 92.9 0.3 1E-05 45.3 8.3 37 107-143 1-38 (262)
108 4inf_A Metal-dependent hydrola 92.1 1.7 5.7E-05 42.6 12.8 55 183-238 160-214 (373)
109 2wje_A CPS4B, tyrosine-protein 73.0 3.1 0.0001 38.0 4.3 39 105-143 3-42 (247)
110 2w9m_A Polymerase X; SAXS, DNA 72.0 28 0.00095 36.1 11.8 33 107-143 328-360 (578)
111 3lmz_A Putative sugar isomeras 71.4 30 0.001 31.2 10.9 102 186-315 33-134 (257)
112 2gwg_A 4-oxalomesaconate hydra 70.8 11 0.00036 36.3 7.9 57 182-238 122-182 (350)
113 3p6l_A Sugar phosphate isomera 66.4 29 0.001 31.3 9.7 104 185-316 25-137 (262)
114 3aam_A Endonuclease IV, endoiv 66.0 76 0.0026 28.6 14.2 112 187-315 18-141 (270)
115 2q02_A Putative cytoplasmic pr 65.1 54 0.0018 29.6 11.3 106 188-315 24-141 (272)
116 1tx2_A DHPS, dihydropteroate s 58.0 1E+02 0.0034 28.7 11.5 120 184-315 65-206 (297)
117 2qpx_A Predicted metal-depende 56.6 1.1E+02 0.0037 29.5 12.2 23 405-427 344-371 (376)
118 1aj0_A DHPS, dihydropteroate s 55.7 68 0.0023 29.6 9.9 97 183-292 39-142 (282)
119 3m5v_A DHDPS, dihydrodipicolin 51.6 1.5E+02 0.0052 27.5 12.2 120 186-306 32-161 (301)
120 2nx9_A Oxaloacetate decarboxyl 50.7 2E+02 0.0069 28.6 13.1 125 128-256 103-230 (464)
121 3n9r_A Fructose-bisphosphate a 49.3 85 0.0029 29.3 9.4 106 181-288 26-133 (307)
122 1f6y_A 5-methyltetrahydrofolat 49.0 74 0.0025 29.0 8.9 121 184-315 27-162 (262)
123 3l21_A DHDPS, dihydrodipicolin 45.3 1.9E+02 0.0066 26.8 12.1 119 186-305 40-167 (304)
124 3q94_A Fructose-bisphosphate a 44.1 1.7E+02 0.0059 26.9 10.6 51 185-238 161-216 (288)
125 1gvf_A Tagatose-bisphosphate a 43.6 97 0.0033 28.6 8.8 106 181-288 27-133 (286)
126 3q94_A Fructose-bisphosphate a 43.0 1.6E+02 0.0054 27.2 10.1 107 181-288 30-139 (288)
127 1o5k_A DHDPS, dihydrodipicolin 42.8 2E+02 0.0068 26.7 11.1 110 120-235 28-145 (306)
128 1v77_A PH1877P, hypothetical p 42.6 27 0.00092 30.8 4.7 57 352-426 153-209 (212)
129 3tva_A Xylose isomerase domain 42.4 1.9E+02 0.0066 26.0 12.5 89 193-292 31-124 (290)
130 3na8_A Putative dihydrodipicol 42.3 2.2E+02 0.0074 26.6 11.9 110 120-235 40-157 (315)
131 3flu_A DHDPS, dihydrodipicolin 42.3 2.1E+02 0.0072 26.4 13.0 110 120-235 23-140 (297)
132 2wqp_A Polysialic acid capsule 41.9 1.9E+02 0.0064 27.6 10.7 122 181-313 33-180 (349)
133 3tak_A DHDPS, dihydrodipicolin 41.3 2.1E+02 0.0073 26.2 12.2 110 120-235 17-134 (291)
134 3si9_A DHDPS, dihydrodipicolin 41.2 2.3E+02 0.0077 26.5 12.8 110 120-235 38-155 (315)
135 3l21_A DHDPS, dihydrodipicolin 41.1 2.2E+02 0.0076 26.4 12.1 110 120-235 31-148 (304)
136 2yxo_A Histidinol phosphatase; 41.0 15 0.0005 33.6 2.8 34 107-143 1-34 (267)
137 3pm6_A Putative fructose-bisph 40.4 90 0.0031 29.1 8.0 104 182-287 37-148 (306)
138 1rvg_A Fructose-1,6-bisphospha 40.1 1.2E+02 0.0041 28.3 8.8 106 181-288 26-131 (305)
139 1gvf_A Tagatose-bisphosphate a 39.8 2.1E+02 0.0073 26.3 10.5 51 185-238 157-212 (286)
140 3eb2_A Putative dihydrodipicol 39.7 2.3E+02 0.0079 26.2 11.8 110 120-235 20-137 (300)
141 1eye_A DHPS 1, dihydropteroate 39.5 2.3E+02 0.0078 26.0 12.1 98 182-291 29-132 (280)
142 3qze_A DHDPS, dihydrodipicolin 39.1 2.4E+02 0.0083 26.2 11.8 110 120-235 39-156 (314)
143 2yci_X 5-methyltetrahydrofolat 38.4 2.3E+02 0.0079 25.8 10.7 122 183-315 35-171 (271)
144 3m5v_A DHDPS, dihydrodipicolin 38.2 2.4E+02 0.0083 26.0 12.1 111 120-235 23-141 (301)
145 3aal_A Probable endonuclease 4 38.0 1.8E+02 0.0062 26.6 10.2 87 185-292 21-116 (303)
146 3fkr_A L-2-keto-3-deoxyarabona 37.9 2.5E+02 0.0086 26.1 11.2 112 120-235 24-144 (309)
147 2x7v_A Probable endonuclease 4 37.7 2.2E+02 0.0077 25.5 10.8 86 186-292 16-111 (287)
148 1m65_A Hypothetical protein YC 37.5 17 0.0006 32.6 2.8 34 107-143 3-36 (245)
149 3daq_A DHDPS, dihydrodipicolin 37.3 2.5E+02 0.0085 25.8 12.3 120 186-306 27-155 (292)
150 4dpp_A DHDPS 2, dihydrodipicol 37.3 2.8E+02 0.0096 26.5 12.7 108 120-234 75-189 (360)
151 2yxg_A DHDPS, dihydrodipicolin 36.9 2.5E+02 0.0085 25.7 11.8 110 120-235 16-133 (289)
152 2rfg_A Dihydrodipicolinate syn 36.8 2.6E+02 0.0088 25.8 11.0 110 120-235 16-133 (297)
153 3flu_A DHDPS, dihydrodipicolin 36.7 2.6E+02 0.0088 25.8 12.8 118 187-305 33-159 (297)
154 1vp8_A Hypothetical protein AF 36.6 2E+02 0.007 24.6 13.2 79 267-367 27-106 (201)
155 1q7z_A 5-methyltetrahydrofolat 36.6 2.7E+02 0.0093 28.5 11.8 121 184-315 342-475 (566)
156 3ipw_A Hydrolase TATD family p 36.4 2.7E+02 0.0094 26.1 11.6 42 264-307 148-190 (325)
157 2r8w_A AGR_C_1641P; APC7498, d 36.3 2.8E+02 0.0095 26.1 11.8 110 120-235 50-167 (332)
158 3na8_A Putative dihydrodipicol 36.0 2.7E+02 0.0093 25.9 11.5 118 188-306 51-178 (315)
159 3s5o_A 4-hydroxy-2-oxoglutarat 35.9 2.7E+02 0.0092 25.8 12.7 115 120-235 30-149 (307)
160 2isw_A Putative fructose-1,6-b 35.9 1.9E+02 0.0063 27.2 9.4 105 181-287 27-133 (323)
161 2v9d_A YAGE; dihydrodipicolini 35.5 2.9E+02 0.01 26.1 11.9 110 120-235 47-164 (343)
162 1xky_A Dihydrodipicolinate syn 35.2 2.7E+02 0.0093 25.7 12.8 110 120-235 28-145 (301)
163 3si9_A DHDPS, dihydrodipicolin 35.1 2.8E+02 0.0096 25.8 11.5 117 188-305 49-174 (315)
164 2vc6_A MOSA, dihydrodipicolina 34.9 2.7E+02 0.0093 25.5 11.5 110 120-235 16-133 (292)
165 2ftp_A Hydroxymethylglutaryl-C 34.6 2.3E+02 0.008 26.1 10.2 50 186-238 162-213 (302)
166 3qfe_A Putative dihydrodipicol 34.5 2.8E+02 0.0095 25.9 10.7 112 120-235 27-146 (318)
167 3tak_A DHDPS, dihydrodipicolin 34.4 2.7E+02 0.0094 25.5 12.6 119 186-305 26-153 (291)
168 2vc6_A MOSA, dihydrodipicolina 34.3 2.8E+02 0.0095 25.5 10.9 118 186-305 25-152 (292)
169 2ehh_A DHDPS, dihydrodipicolin 34.0 2.8E+02 0.0096 25.5 12.0 110 120-235 16-133 (294)
170 2ojp_A DHDPS, dihydrodipicolin 33.5 2.7E+02 0.0093 25.5 10.4 110 120-235 17-134 (292)
171 3e96_A Dihydrodipicolinate syn 33.3 3E+02 0.01 25.6 11.1 110 120-235 28-144 (316)
172 3qze_A DHDPS, dihydrodipicolin 33.2 3E+02 0.01 25.6 12.4 117 188-305 50-175 (314)
173 2i5g_A Amidohydrolase; NYSGXRC 32.4 2.8E+02 0.0096 26.0 10.3 31 394-425 290-320 (325)
174 2hmc_A AGR_L_411P, dihydrodipi 32.1 3.3E+02 0.011 25.7 12.3 117 187-306 52-178 (344)
175 4e38_A Keto-hydroxyglutarate-a 32.0 2E+02 0.0067 25.6 8.6 97 123-241 44-140 (232)
176 3d0c_A Dihydrodipicolinate syn 32.0 3.2E+02 0.011 25.4 11.8 110 120-235 28-144 (314)
177 3cpr_A Dihydrodipicolinate syn 31.9 3.1E+02 0.011 25.3 13.2 110 120-235 32-149 (304)
178 2wkj_A N-acetylneuraminate lya 31.9 3.1E+02 0.011 25.3 12.4 110 120-235 27-145 (303)
179 1qtw_A Endonuclease IV; DNA re 31.8 2E+02 0.007 25.7 9.3 87 185-292 15-111 (285)
180 2h9a_B CO dehydrogenase/acetyl 31.5 3.2E+02 0.011 25.4 11.6 123 185-315 77-209 (310)
181 3a5f_A Dihydrodipicolinate syn 31.5 2.7E+02 0.0092 25.6 10.0 108 122-235 19-134 (291)
182 2isw_A Putative fructose-1,6-b 31.5 1.7E+02 0.0057 27.6 8.3 50 185-237 155-213 (323)
183 3rcm_A TATD family hydrolase; 30.6 3.2E+02 0.011 25.0 12.5 42 264-307 108-149 (287)
184 1vli_A Spore coat polysacchari 30.5 1.5E+02 0.0052 28.6 8.1 91 212-313 98-191 (385)
185 3b4u_A Dihydrodipicolinate syn 30.3 3.2E+02 0.011 25.0 13.1 113 120-235 19-140 (294)
186 3dx5_A Uncharacterized protein 30.2 3E+02 0.01 24.6 11.0 110 187-315 19-144 (286)
187 3daq_A DHDPS, dihydrodipicolin 30.0 3.3E+02 0.011 25.0 12.0 107 123-235 21-135 (292)
188 2bdq_A Copper homeostasis prot 29.9 2.9E+02 0.0099 24.3 11.1 62 193-257 86-151 (224)
189 4dzi_A Putative TIM-barrel met 29.5 45 0.0015 32.9 4.4 56 182-238 175-234 (423)
190 3eb2_A Putative dihydrodipicol 29.4 2.6E+02 0.009 25.8 9.5 117 188-305 31-156 (300)
191 2yb1_A Amidohydrolase; HET: AM 29.2 31 0.0011 32.1 3.0 33 107-143 3-35 (292)
192 3fkr_A L-2-keto-3-deoxyarabona 29.2 3.5E+02 0.012 25.1 12.0 115 186-305 33-162 (309)
193 1vs1_A 3-deoxy-7-phosphoheptul 29.2 3.3E+02 0.011 24.8 12.6 118 183-312 52-178 (276)
194 1n7k_A Deoxyribose-phosphate a 28.8 2.4E+02 0.0083 25.0 8.7 137 120-290 31-168 (234)
195 1rvg_A Fructose-1,6-bisphospha 28.8 2.3E+02 0.0077 26.4 8.7 50 185-237 155-211 (305)
196 2ojp_A DHDPS, dihydrodipicolin 28.8 3.4E+02 0.012 24.8 10.2 118 186-305 26-153 (292)
197 3n9r_A Fructose-bisphosphate a 28.5 2E+02 0.007 26.7 8.3 50 185-237 157-213 (307)
198 1f6k_A N-acetylneuraminate lya 28.5 3.5E+02 0.012 24.8 12.1 110 120-235 19-137 (293)
199 1itu_A Renal dipeptidase; glyc 28.3 1.2E+02 0.0043 29.1 7.1 32 394-426 305-336 (369)
200 2ehh_A DHDPS, dihydrodipicolin 28.0 3.5E+02 0.012 24.8 12.5 117 186-304 25-151 (294)
201 3e96_A Dihydrodipicolinate syn 27.9 3.7E+02 0.013 25.0 10.4 111 194-305 44-159 (316)
202 2r8w_A AGR_C_1641P; APC7498, d 27.6 3.9E+02 0.013 25.1 12.2 118 186-305 59-186 (332)
203 1twd_A Copper homeostasis prot 27.4 3.2E+02 0.011 24.7 9.1 62 193-257 83-146 (256)
204 3a5f_A Dihydrodipicolinate syn 27.3 3.5E+02 0.012 24.7 10.0 117 187-305 27-153 (291)
205 1o5k_A DHDPS, dihydrodipicolin 27.1 3.8E+02 0.013 24.8 12.0 116 187-304 38-163 (306)
206 2yxg_A DHDPS, dihydrodipicolin 26.7 3.7E+02 0.013 24.5 12.7 117 186-304 25-151 (289)
207 1xky_A Dihydrodipicolinate syn 26.6 3.8E+02 0.013 24.7 12.5 116 188-305 39-164 (301)
208 2v9d_A YAGE; dihydrodipicolini 26.3 4.2E+02 0.014 25.0 12.0 115 188-304 58-182 (343)
209 1rqb_A Transcarboxylase 5S sub 25.5 5.4E+02 0.018 26.1 13.0 126 127-256 119-249 (539)
210 3dz1_A Dihydrodipicolinate syn 25.4 4.1E+02 0.014 24.6 11.7 108 120-235 24-141 (313)
211 3b4u_A Dihydrodipicolinate syn 24.9 4E+02 0.014 24.4 11.9 117 186-304 28-158 (294)
212 2rfg_A Dihydrodipicolinate syn 24.8 4.1E+02 0.014 24.4 11.4 118 186-305 25-152 (297)
213 3cpr_A Dihydrodipicolinate syn 24.7 4.1E+02 0.014 24.4 13.4 118 186-305 41-168 (304)
214 1f6k_A N-acetylneuraminate lya 24.6 4.1E+02 0.014 24.3 12.6 118 186-305 28-156 (293)
215 3dz1_A Dihydrodipicolinate syn 24.5 4.2E+02 0.015 24.5 12.3 117 186-305 33-160 (313)
216 3ly0_A Dipeptidase AC. metallo 24.2 2.8E+02 0.0097 26.5 8.7 57 358-426 296-353 (364)
217 2y5s_A DHPS, dihydropteroate s 24.1 4.2E+02 0.015 24.4 10.0 97 182-291 46-148 (294)
218 3h5d_A DHDPS, dihydrodipicolin 24.1 4.3E+02 0.015 24.4 11.9 119 185-306 31-161 (311)
219 3h5d_A DHDPS, dihydrodipicolin 24.0 4.3E+02 0.015 24.4 12.4 113 120-235 23-141 (311)
220 2wkj_A N-acetylneuraminate lya 23.8 4.3E+02 0.015 24.3 12.6 116 188-305 38-164 (303)
221 1i60_A IOLI protein; beta barr 23.7 2.2E+02 0.0076 25.3 7.9 81 190-291 21-105 (278)
222 3qc0_A Sugar isomerase; TIM ba 22.9 2.6E+02 0.009 24.7 8.3 105 186-315 22-144 (275)
223 2anu_A Hypothetical protein TM 22.8 45 0.0015 30.2 2.8 33 107-143 21-53 (255)
224 3lab_A Putative KDPG (2-keto-3 22.6 2.4E+02 0.0082 24.7 7.3 98 122-241 22-125 (217)
225 3fy3_A Hemolysin; beta helix, 22.0 1.1E+02 0.0036 27.3 4.8 50 431-495 94-144 (236)
226 3q48_A Chaperone CUPB2; IG fol 20.8 29 0.00098 31.7 0.9 10 199-208 139-148 (257)
227 3b40_A PVDM, probable dipeptid 20.7 4.5E+02 0.015 25.6 9.6 32 394-426 375-406 (417)
228 2q01_A Uronate isomerase; stru 20.0 2.4E+02 0.0081 28.3 7.5 172 215-428 290-474 (497)
No 1
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.6e-62 Score=507.52 Aligned_cols=461 Identities=48% Similarity=0.825 Sum_probs=412.6
Q ss_pred cEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHH
Q 009410 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~ 133 (535)
+++|+|++|++++....++|+|+||+|++|++... +.++||++|++|+|||||+|+|+.....+...++++....+.
T Consensus 2 ~~~i~~~~v~~~~~~~~~~v~I~~G~I~~i~~~~~---~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~a 78 (490)
T 3dc8_A 2 STVIKGGTIVTADLTYKADVKVEGGRIVEIGPNLS---GAETLDATGCYVMPGGIDPHTHLEMPFMGTYSSDDFESGTRA 78 (490)
T ss_dssp CEEEESCEEECSSCEEECEEEEETTEEEEEESSCC---CSEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHHHHH
T ss_pred cEEEEccEEECCCCceeeeEEEECCEEEEeccCCC---CCeEEECCCCEEecCEEeeccccCCCCCCCCCHHHHHHHHHH
Confidence 58999999999888788999999999999998653 578999999999999999999998874444678889999999
Q ss_pred HHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcC
Q 009410 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (535)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 212 (535)
++++||||++++....+. ...+.++.+.....+..++++++........+..+++..+.++.|+..+|+|+++.+....
T Consensus 79 a~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~~~~~d~~~~~~~~~~~~~~l~el~~l~~~~G~~~~k~~~~~~~~~~~ 158 (490)
T 3dc8_A 79 ALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHMAITWWGEQVFNEMETIVKDKGINTFKHFMAYKGALMV 158 (490)
T ss_dssp HHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTTTCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESCSTTTTBC
T ss_pred HHHcCEEeecccCCCCCCcCHHHHHHHHHHHhhcccceeeeEEEEecCcHHHHHHHHHHHHhCCCCEEEEEecCCCCccC
Confidence 999999999999654443 5677777777766666778888877776666667888888756899999999998887788
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
+.+.+.++++.|+++|.++.+|+++...+......+...|..++..|...+|...+...+.+.+.++...+.++|+.|.+
T Consensus 159 ~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~g~~lhi~HvS 238 (490)
T 3dc8_A 159 DDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMAGCPVYIVHTS 238 (490)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEESSCC
T ss_pred CHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCC
Confidence 99999999999999999999999998887777778888899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCC
Q 009410 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (535)
Q Consensus 293 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~ 372 (535)
+.+..+.++.+++.|++|+++++++++.++.+.+...+|..+..++++||+|...++.++++++++|...+++|||.|+.
T Consensus 239 t~~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id~i~sDh~p~~ 318 (490)
T 3dc8_A 239 CEQAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDHCAFT 318 (490)
T ss_dssp SHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSCCCBCCBCCCC
T ss_pred CHHHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCceEEECCCCCCC
Confidence 99999999999999999999999999999999887665543578899999999999999999999999999999999999
Q ss_pred hhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCc
Q 009410 373 STQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSS 449 (535)
Q Consensus 373 ~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~ 449 (535)
...+..+.++|..+|+ |++..++.++..++..+++|++++++++|.|||++||+++++|+|++|+.|||||+|.+..
T Consensus 319 ~~~K~~g~~~f~~~~~G~~gle~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~l~~G~~ADlvv~d~~~~ 398 (490)
T 3dc8_A 319 TEQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVATGRITMNEFVAVTSTNIAKILNIYPKKGAILVGADADLVVWDPKRS 398 (490)
T ss_dssp HHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEEEEEE
T ss_pred HHHhhccCCChhhCCCChHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCcCCEEEEecCcc
Confidence 9988776678999987 8999999999887888899999999999999999999987899999999999999999999
Q ss_pred eeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCCCcccccCchhhh
Q 009410 450 FEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNYLFHGLDKAD 517 (535)
Q Consensus 450 ~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (535)
+.++.+++.++..|+||+|..+.++|.+||++|++||++|+++...+.|++++++++...+.++.+.+
T Consensus 399 ~~i~~~~~~s~~~~sp~~g~~~~g~v~~t~~~G~~v~~~g~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 466 (490)
T 3dc8_A 399 KTISAKTQQSAIDYNVFEGKTVTGLPRFTLTRGVVSIEEGTVKTQEGHGEFVRRDPFPAVSTALSTWK 466 (490)
T ss_dssp EECCTTTCSSSSSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCSCCHHHHHHHHHH
T ss_pred eEechhhccccCCCCcccCcEEeeEEEEEEECCEEEEECCEEcccCCCceeccCCCCcchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999888999999999887655444443
No 2
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=100.00 E-value=5.2e-59 Score=484.35 Aligned_cols=453 Identities=44% Similarity=0.714 Sum_probs=397.6
Q ss_pred cEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHH
Q 009410 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~ 133 (535)
+++|+|++|++++....++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+..++.+....+.+....+.
T Consensus 2 ~~~i~n~~v~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~~ 80 (461)
T 3sfw_A 2 KKWIRNGTVVTASDTYQADVLIDGEKVVAIGSDLQ-ATDAEVIDATGYYLLPGGIDPHTHLDMPFGGTVTSDNFFTGTKA 80 (461)
T ss_dssp EEEEESCEEECSSCEEECEEEEETTEEEEEESCCC-CSSCEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHHHHH
T ss_pred cEEEECeEEECCCCcEEEEEEEECCEEEEEeCCCC-CCCCeEEECCCCEEEeeeEEeEeccCcCCCCcccHhHHHHHHHH
Confidence 58999999999887788999999999999998653 34689999999999999999999998765556677888888999
Q ss_pred HHhCCcEEEeccccCCCC-ChHHHHHHHHHHh-cccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCc
Q 009410 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (535)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (535)
++++||||++++...... ...+.++...... ....++++++........+..++++++.++.|+..+|+++++.+...
T Consensus 81 ~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~ik~~~~~~~~~~ 160 (461)
T 3sfw_A 81 AAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGFHLMVSDANDHVLEELESVVNNEGITSLKVFMAYKNVLM 160 (461)
T ss_dssp HHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSCCCHHHHHHHHHHHHTSCCCEEEEESSSTTTTB
T ss_pred HHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEEEEecCCCcc
Confidence 999999999998654332 5666666655554 34667777777666566777888888883389999999999877778
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
.+.+.+.++++.|+++|+++.+|+++........+.+...|...+..|...+|...+..++.+++.++...+.++|+.|+
T Consensus 161 ~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi~H~ 240 (461)
T 3sfw_A 161 ADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYVVHV 240 (461)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEECSC
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEec
Confidence 89999999999999999999999999888887777888889888888999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCC
Q 009410 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (535)
Q Consensus 292 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~ 371 (535)
++.+..+.++.+++.|++|+++.++++++++.+.+....+ .+..++++||+|...++.++++++++|++++++||+.|+
T Consensus 241 s~~~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~-~~~~~~~~Pplr~~~~~~aL~~~l~~G~~~~i~sD~~p~ 319 (461)
T 3sfw_A 241 SCADAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDF-EGAKYVWSPPLREKWNQDVLWSALKNGILQTVGSDHCPF 319 (461)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTT-GGGGGCCSSCCCCTHHHHHHHHHHHTTSSCEECCCBCCC
T ss_pred CcHHHHHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccc-cCCcEEEcCCCCChHHHHHHHHHHhcCCceEEECCCCCC
Confidence 9999999999999999999999999999999988765433 246788999999999999999999999999999999998
Q ss_pred Chhh-hhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCC
Q 009410 372 NSTQ-KAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPN 447 (535)
Q Consensus 372 ~~~~-~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~ 447 (535)
.... +..+.++|..+|+ |++..+..+++.++..+++|++++++++|.|||+++|+++++|+|++|+.|||||+|.+
T Consensus 320 ~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~~~~G~l~~G~~Ad~~~~d~~ 399 (461)
T 3sfw_A 320 NFSGQKELGRRDFTKIPNGGPIIEDRMTILFSEGVRKGKISLNQFVDITSTKVAKLFGMFPQKGTIAVGSDADIVLFDPT 399 (461)
T ss_dssp CTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHHTTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCSTTSBCCEEEEEEE
T ss_pred CchhhhhcccCCHhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHcCCCCCCCccCCCCcCCEEEEcCC
Confidence 7433 3333457888886 78889999887788888899999999999999999999888999999999999999999
Q ss_pred CceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCCCcc
Q 009410 448 SSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNY 508 (535)
Q Consensus 448 ~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~~~~ 508 (535)
.++.++.+++.+...|+||+|..+.++|.+||++|++||++|+++...+.|+++++++.+|
T Consensus 400 ~~~~~~~~~~~~~~~~sp~~g~~~~~~v~~t~v~G~~v~~~g~~~~~~~~G~~~~~~~~~~ 460 (461)
T 3sfw_A 400 VQRTISVETHHMNVDYNPFEGMQVHGDVISVLSRGAFVVRNKQFVGHAGAGRYVKRSTFAR 460 (461)
T ss_dssp EEEECCTTTCCSSSSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCCCCC
T ss_pred CCEEEchHHcccccCCCCCCCCEecceEEEEEECCEEEEECCeeccCCCCceEecCCCCCC
Confidence 9999999999999999999999999999999999999999999999888899999887765
No 3
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=9.4e-57 Score=473.78 Aligned_cols=470 Identities=51% Similarity=0.875 Sum_probs=395.5
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHH
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~ 131 (535)
..+++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+...+.+..+.++++...
T Consensus 7 ~~~~lI~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~ 86 (521)
T 2ftw_A 7 TGTILIKNGTVVNDDRYFKSDVLVENGIIKEISKNIEPKEGIKVVDATDKLLLPGGIDTHTHFQLPFMGTVSVDDFDIGT 86 (521)
T ss_dssp CCCEEEESCEEECSSCEEECEEEEETTEEEEEESCCCCCSSCCEEECTTCEEEECEEEEEECTTCEETTEECSSCHHHHH
T ss_pred cCCEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEeeecccCcCCCCccCHHHHHHHH
Confidence 46799999999998777789999999999999986543445789999999999999999999987644445667788888
Q ss_pred HHHHhCCcEEEeccccCCC-CChHHHHHHHHHHh-cccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCC
Q 009410 132 AAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (535)
+.++++||||++|+..+.. ....+.++.+.... .....+++++......+.+..+++.++.++.|+..+|+++.+.+.
T Consensus 87 ~~a~~~G~Ttv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~~l~~l~~~~G~~~~k~~~~~~~~ 166 (521)
T 2ftw_A 87 QAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSFKCFMAYKNS 166 (521)
T ss_dssp HHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHHTTCSSEEEEEEECCSCCHHHHHHHHHHHHHSCCCEEEEESSCTTT
T ss_pred HHHHhCCcceecCcCCCCCCcCHHHHHHHHHHHhhcCceeeEeeEEeecCCChhHHHHHHHHHHhCCCCEEEEEeccCCC
Confidence 9999999999999865432 24566666555443 234456666666555555566777777756799999999887777
Q ss_pred CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEE
Q 009410 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (535)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (535)
...+.+.++++++.|+++|+++.+|+++........+.+.+.|+.++.+|...++...+...+.+++.++...+.++++.
T Consensus 167 ~~~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~hi~ 246 (521)
T 2ftw_A 167 FMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSVCTPVYIV 246 (521)
T ss_dssp TBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHHSCTHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccCcHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 78899999999999999999999999987666677788889999999888888888888888889999999999999999
Q ss_pred EccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCC-cccHHHHHHHHhcCCeEEEeCCC
Q 009410 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA-SGHNKALQAALATGILQLVGTDH 368 (535)
Q Consensus 290 H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~-~~~~~~~~~~l~~Gv~~~lgtD~ 368 (535)
|+++....+.++.+++.|+.++++++++++.++...+...+|..+..++++||.|. ..+.+++++++..|...++|||+
T Consensus 247 h~ss~~~~~~i~~~r~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~g~~~~~gsD~ 326 (521)
T 2ftw_A 247 HVQSIGAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDN 326 (521)
T ss_dssp SCCCHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHHHHHHHHHTSSCCCBCCB
T ss_pred ecCcHHHHHHHHHHHHcCCeEEEEEcchhhccCHHHhcCCCcccCcceEEcCCCCCChhhHHHHHHHhcCCCEEEEEeCC
Confidence 99987777889999999999999888888888776665444444455678899998 57788999999999999999999
Q ss_pred CCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEc
Q 009410 369 CAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 445 (535)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld 445 (535)
.++....+....++|..+|+ |++..+...+..+++.++++++++++++|.|||+++|+++++|+|++|++|||||||
T Consensus 327 ~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~i~~G~~ADlvv~d 406 (521)
T 2ftw_A 327 CTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWENGVNTGKLTWCQFVRATSSERARIFNIYPRKGRIDVGCDGDIVIWD 406 (521)
T ss_dssp CCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEE
T ss_pred CCCCHHHhhcccCChhhCCCCCccHHHHHHHHHHHHHhcCCCCHHHHHHHhChhHHHHhCCCCCCCCcCCCCcCCEEEEe
Confidence 98887665544457777776 778888888877888888999999999999999999998789999999999999999
Q ss_pred CCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCCCcccccCchhhhHHHh
Q 009410 446 PNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNYLFHGLDKADAKYL 521 (535)
Q Consensus 446 ~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (535)
.+..+.++.+++.+...|+||+|+.+.++|..||++|++||++|+++...+.|++++++++.+++.++.++++...
T Consensus 407 ~~~~~~i~~~~~~~~~~~~p~~g~~~~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 482 (521)
T 2ftw_A 407 PNQSKTISKDTHHHAVDFNIFEGIKVTGIAVTTIVAGNIVWSDNKLSCVKGSGRFVPRPPFGPVFDGIEQRDKVRN 482 (521)
T ss_dssp EEEEEECCTTTCCCSSSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCSSCGGGTTHHHHHHHHC
T ss_pred CCCCEEEChHHccccCCCCCcCCCEeeeeEEEEEECCEEEEECCeecccCcCceEecCCCCCchHHHHHHHHhhhc
Confidence 9999999999999999999999999999999999999999999999987889999999998888888876666443
No 4
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=100.00 E-value=6.1e-56 Score=462.11 Aligned_cols=450 Identities=36% Similarity=0.624 Sum_probs=372.7
Q ss_pred EEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHHH
Q 009410 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (535)
Q Consensus 55 ~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~ 134 (535)
++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+...+.+...+++++...+.+
T Consensus 2 ~li~n~~vv~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~ 81 (458)
T 1gkp_A 2 LLIKNGEIITADSRYKADIYAEGETITRIGQNLEAPPGTEVIDATGKYVFPGFIDPHVHIYLPFMATFAKDTHETGSKAA 81 (458)
T ss_dssp EEEESCEEEETTEEEECEEEESSSBCCEEESCCCCCTTCEEEECTTSEEEECEEEEEECSSCEETTEECSCCHHHHHHHH
T ss_pred EEEEeeEEECCCCceEeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEecccCCCcCCCCCcCHhHHHHHHHHH
Confidence 68999999998766788999999999999986543445789999999999999999999986543444677787778888
Q ss_pred HhCCcEEEeccccCCC-CChHHHHHHHHHHh-cccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcC
Q 009410 135 LAGGTTMHIDFVIPIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (535)
Q Consensus 135 l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 212 (535)
+++||||++|+..... ....+.++...+.. .....+++++........+..++++++. +.|+..+|+++++++....
T Consensus 82 ~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 160 (458)
T 1gkp_A 82 LMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVSKFDEKTEGQLREIV-ADGISSFKIFLSYKNFFGV 160 (458)
T ss_dssp HHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECCCCCTTHHHHHHHHH-HTTCCEEEEEECSTTTTBC
T ss_pred HhCCccEEEeCCCCCCCCCHHHHHHHHHHHhccCceeeEEEEEeecCCchhhHHHHHHHH-HhCCCEEEEEeccCCCcCC
Confidence 9999999999865422 24556666554432 2345566666554445555677788877 6699999999888776778
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
+.+.+.++++.|+++++++.+|+++........+.+...|...+.+|...+|...+.+.+.+++.++...+.++++.|++
T Consensus 161 ~~~~l~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~H~~ 240 (458)
T 1gkp_A 161 DDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGATGYVVHLS 240 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHHTCEEEECSCC
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhhccCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 99999999999999999999999887776666677788899998888888898888888999999999999999999999
Q ss_pred CHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCC
Q 009410 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (535)
Q Consensus 293 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~ 372 (535)
..+..+.++.+++.|+.++++.+++++++++..+....| .+..+++.||.|....++++++++++|+++++|||+.+++
T Consensus 241 ~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~-~g~~~~~~~p~r~~~~~~~l~~~~~~G~~~~~gtD~~~~~ 319 (458)
T 1gkp_A 241 CKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGV-EAMKYIMSPPLRDKRNQKVLWDALAQGFIDTVGTDHCPFD 319 (458)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHH-HHHTTCCSSCCCCTHHHHHHHHHHHTTSSCEEECCBCCCC
T ss_pred CHHHHHHHHHHHHcCCeEEEEecccceeeCHHHhccccc-CCcceEEeCCCCCHHHHHHHHHHHhcCCeeEEECCCCCCC
Confidence 987778899999999999888888888887765532211 1234456789999888999999999999999999998887
Q ss_pred hhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCc
Q 009410 373 STQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSS 449 (535)
Q Consensus 373 ~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~ 449 (535)
...+..+.+.|...|. |+++.+..+++++++.+++|++++++++|.|||++||+++++|+|++||+|||||+|.+..
T Consensus 320 ~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 399 (458)
T 1gkp_A 320 TEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGVSRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAVGSDADLVVYDPQYR 399 (458)
T ss_dssp HHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTSSSCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEETTCC
T ss_pred HHHhhcccCChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhCHHHHhCCCCCCCcCCCCCcCCEEEEeCCCC
Confidence 6654433346666665 6788888888777777679999999999999999999977899999999999999999999
Q ss_pred eeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCCC
Q 009410 450 FEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 506 (535)
Q Consensus 450 ~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~~ 506 (535)
+.++.+++.+...|+||+|..+.++|+.||++|++||++|+++...+.|++++++.|
T Consensus 400 ~~~~~~~~~~~~~~~p~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~ 456 (458)
T 1gkp_A 400 GTISVKTQHVNNDYNGFEGFEIDGRPSVVTVRGKVAVRDGQFVGEKGWGKLLRREPM 456 (458)
T ss_dssp EECCGGGCCSSSSCCTTTTCEESCEEEEEEETTEEEEETTEECCCTTCCCBCCCCCC
T ss_pred eEEchHHcccccCCCccCCCEEeeEEEEEEECCEEEEECCeeccCCCCceeccCcCC
Confidence 999999999999999999999999999999999999999999987767999988765
No 5
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=100.00 E-value=7.1e-56 Score=468.51 Aligned_cols=451 Identities=32% Similarity=0.536 Sum_probs=371.1
Q ss_pred ccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-CCCchhhhHHHH
Q 009410 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GSETIDDFFSGQ 131 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~~~~~~~~~~~ 131 (535)
++++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..... +..+++++....
T Consensus 3 m~~li~n~~vv~~~~~~~~~v~I~~g~I~~Ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~~~~~ 82 (559)
T 2fty_A 3 YDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHAT 82 (559)
T ss_dssp EEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCGGGEEEEEECTTCEEEECEEECCBCCCCTTCTTSCCSCCHHHHH
T ss_pred ceEEEECcEEEcCCCceeeeEEEECCEEEEecCCCCCCCCCeEEeCCCCEEEcCEEeeccCcCccccccCCCHHHHHHHH
Confidence 5789999999998877789999999999999986432234689999999999999999999987631 223667788888
Q ss_pred HHHHhCCcEEEeccccCC---CC-C-hHHHHHH-HHHHhc-ccccccceeeeeecC---Chh---hH-HHHHHHHHHcCC
Q 009410 132 AAALAGGTTMHIDFVIPI---NG-S-LTAGFEA-YEKKAK-NSCMDYGFHMAITKW---DEV---VS-DEMEVMVKEKGI 197 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~---~~-~-~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~---~~~---~~-~~~~~~~~~~g~ 197 (535)
+.++++||||++|+.... .. . ..+.+.. ...... ...++++++...... ..+ .. +++..+.++.|+
T Consensus 83 ~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~l~~~~~~l~~~~G~ 162 (559)
T 2fty_A 83 RSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGV 162 (559)
T ss_dssp HHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhCcEEEEEECcCcccCCcchHHHHHHHHHHHHHHHhhcceeEEEeeeeeccCcCCCchhhhhHHHHHHHHHHHCCC
Confidence 899999999999997543 22 2 3334400 022222 344555555443333 233 45 677777745699
Q ss_pred CEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHH
Q 009410 198 NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR 277 (535)
Q Consensus 198 ~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (535)
..+|+++.+++ ..++.+.++++++.|+++|+++.+|+++...+......+.+.|....+.|...+|...+...+.+++.
T Consensus 163 ~~iki~~~~~~-~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~~~E~~av~~~i~ 241 (559)
T 2fty_A 163 SSVKMFMTYPG-LQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAIT 241 (559)
T ss_dssp CEEEEESSSTT-TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTTHHHHTSCHHHHHHHHHHHHH
T ss_pred CEEEEEecCCC-CcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcCCCChhhcccCCCHHHHHHHHHHHHH
Confidence 99999998876 67899999999999999999999999888776666666778899888888889999999999999999
Q ss_pred HHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCccccc-------------------------C--cC
Q 009410 278 LAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW-------------------------H--SD 330 (535)
Q Consensus 278 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~-------------------------~--~~ 330 (535)
+++..+.++++.|++..+..+.++.+++.|+.|+++.++++++++.+.+. . ..
T Consensus 242 la~~~g~~vhi~H~s~~~~~~~i~~ak~~G~~Vt~e~~p~~l~l~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~ 321 (559)
T 2fty_A 242 LATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDR 321 (559)
T ss_dssp HHHHTTCCEEECSCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGSCC--------CCSCCGGGCSSSTTTCTTCT
T ss_pred HHHHhCCCEEEEcCCCHHHHHHHHHHHHcCCceEEeecCcccccCHHHhhccccccccccccccCccccccccccccCcc
Confidence 99999999999999998878899999999999999999998888766551 0 11
Q ss_pred ccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhh-------------hcCCCCcccCcc---hHHHHH
Q 009410 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQK-------------AFGIDDFRKIPN---GIEERM 394 (535)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~-------------~~~~~~~~~~~~---g~~~~l 394 (535)
| .+..+++.||+|...++.++++++++|+++++|||+.|++...+ ..+..+|..+|+ |+++.+
T Consensus 322 ~-~~~~~~~~PplR~~~~~~~l~~~l~~G~~~~igTD~~p~~~~~k~~~~~k~~~~~~~~~~~~~f~~~~~G~~g~e~~l 400 (559)
T 2fty_A 322 F-IGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRM 400 (559)
T ss_dssp T-GGGGGCCSSCCCCTTSHHHHHHHHHTTSCSEECCCBCCCBSSCCSSTTBGGGGEEGGGTEESCGGGSCCCBCCTTTHH
T ss_pred c-cccCcEECCCCCCHHHHHHHHHHHhcCceEEEEeCCCCCChhhccccccccccccccccccCCHhhCCCCCccHHHHH
Confidence 1 24567889999999999999999999999999999988765532 111247877777 889999
Q ss_pred HHHHHHHHhcCCC-CHHHHHHHHhHHHHHHcCCCCCCccccCC-CCccEEEEcCCC--------ceeeecCCccccCCCC
Q 009410 395 HLVWDTMVESGQI-SVTDYVRLTSTECARIFNVYPRKGAILVG-SDADIIIFNPNS--------SFEITARSHHSRLDTN 464 (535)
Q Consensus 395 ~~~~~~~~~~~~l-s~~eal~~~T~~~A~~lgl~~~~GsI~~G-k~ADlvvld~~~--------~~~i~~~~~~~~~~~~ 464 (535)
+.++..+++.+.| +++++++++|.|||++||+++++|+|++| +.|||||+|.+. ++.++.+++.+...|+
T Consensus 401 ~~ll~~~v~~~~l~~~~~~~~~~t~~~A~~lgl~~~~G~i~~G~~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~s~~~~s 480 (559)
T 2fty_A 401 PLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYT 480 (559)
T ss_dssp HHHHHHTTTTTSSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTTSBCCEEEECCSSCCCCCTTSCSBCCTGGGTSSCSCC
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHhHHHHHHhCCCCCCceeeccCCcCCEEEEeCcccccccCCccEEEchHHhcccCCCC
Confidence 9888777777779 99999999999999999997789999999 999999999997 8999999999999999
Q ss_pred CCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCC
Q 009410 465 VYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRP 505 (535)
Q Consensus 465 p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~ 505 (535)
||+|..+.++|..||++|++||++|+++...+.|++++++.
T Consensus 481 p~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~~~G~~~~~~~ 521 (559)
T 2fty_A 481 PFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKRGK 521 (559)
T ss_dssp TTTTCBCSCCEEEEEETTEEEEETTEECGGGCCCCBCCCCC
T ss_pred CccCCEecceEEEEEECCEEEEECCeeccCCcCCeeecCCc
Confidence 99999999999999999999999999999888899999865
No 6
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=100.00 E-value=8.4e-56 Score=460.04 Aligned_cols=438 Identities=28% Similarity=0.396 Sum_probs=367.4
Q ss_pred cCcccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHH
Q 009410 50 QSSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (535)
Q Consensus 50 ~~~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~ 129 (535)
.|..+++|+|++|++++....++|+|+||+|++|++.... ..++||++|++|+|||||+|+|+..+ +....+.+..
T Consensus 20 ~m~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~--~~~~id~~g~~v~PG~iD~H~H~~~~--g~~~~~~~~~ 95 (473)
T 3e74_A 20 HMSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGD--AKEVMDASGLVVSPGMVDAHTHISEP--GRSHWEGYET 95 (473)
T ss_dssp --CEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCC--EEEEEECTTCEEEECEEEEEECC-----------CHHH
T ss_pred cCcCCEEEEeeEEECCCCceeeeEEEECCEEEEEcCCCCC--CCcEEECCCCEEecCEEEEecccCCC--CCCcHHHHHH
Confidence 4678899999999998887789999999999999986542 37899999999999999999999877 6677888888
Q ss_pred HHHHHHhCCcEEEeccc-cCCCC-ChHHHHHHHHHHh-cccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeec
Q 009410 130 GQAAALAGGTTMHIDFV-IPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (535)
..+.++++||||++|+. ...+. .....++...+.. ....++++++......+ .+++.++. +.|+..+|+++.+
T Consensus 96 ~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~---~~~l~~l~-~~G~~~~K~~~~~ 171 (473)
T 3e74_A 96 GTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYN---IDRLHELD-EVGVVGFKCFVAT 171 (473)
T ss_dssp HHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEECEECCTTC---TTTHHHHH-HHTCSCEEEEC--
T ss_pred HHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEEEeecccch---HHHHHHHH-HcCCCEEEEeccc
Confidence 89999999999999997 33332 3445555544443 34566777766554432 44566666 6799999999875
Q ss_pred C-------CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHH
Q 009410 207 K-------GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (535)
Q Consensus 207 ~-------~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (535)
. +.+..+++.+.++++.|++.|.++.+|+++..............|......|...+|...+...+.+++.++
T Consensus 172 ~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la 251 (473)
T 3e74_A 172 CGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLA 251 (473)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred cCCcccccccCCCCHHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHH
Confidence 3 345568999999999999999999999998766655556667788888888999999999999999999999
Q ss_pred HhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcC
Q 009410 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG 359 (535)
Q Consensus 280 ~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~G 359 (535)
++.+.++|+.|.++.+..+.++.+++.|+.+++++++++++++.+.+... +..+++.||+|...++.++++++++|
T Consensus 252 ~~~g~~lhi~Hvst~~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~----~~~~~~~Pplr~~~~~~~L~~~l~~G 327 (473)
T 3e74_A 252 KVAGCRLHVCHVSSPEGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEI----GTLAKCSPPIRDLENQKGMWEKLFNG 327 (473)
T ss_dssp HHHTCCEEECSCCSHHHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHH----CGGGCCSSCCCCHHHHHHHHHHHHTT
T ss_pred HHhCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCC----CCcEEEeCCCCCHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999998877532 46688999999999999999999999
Q ss_pred CeEEEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCC
Q 009410 360 ILQLVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVG 436 (535)
Q Consensus 360 v~~~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~G 436 (535)
++++++||+.|.....+. .+|..+|+ |++..++.++..++..++++++++++++|.|||+++|++ ++|+|++|
T Consensus 328 ~~~~i~tDh~p~~~~~k~---~~f~~~~~G~~g~e~~l~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~-~~G~l~~G 403 (473)
T 3e74_A 328 EIDCLVSDHSPCPPEMKA---GNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPG 403 (473)
T ss_dssp CCCEECCCBCCCCTTTTC---SCTTTSCCCBCCGGGHHHHHHHHHTTTTCCCHHHHHHHHTHHHHHHTTCT-TSSCCSTT
T ss_pred CCcEEEeCCCCCCHHHcc---cChhhcCCCcccHHhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC-CCCccCCC
Confidence 999999999999888764 37888886 889999999877888889999999999999999999996 57999999
Q ss_pred CCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEE-CCeecccCCCceEeecC
Q 009410 437 SDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE-NDELNVVPGSGKYIEMR 504 (535)
Q Consensus 437 k~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~-~~~~~~~~~~~~~~~~~ 504 (535)
+.|||||+|.+..+.++.+++.+...|+||+|..+.++|.+||++|++||+ +|+++.. +.|++++++
T Consensus 404 ~~AD~vv~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~v~G~~v~~~~g~~~~~-~~G~~~~~~ 471 (473)
T 3e74_A 404 KDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVA-PKGQFILKH 471 (473)
T ss_dssp SBCCEEEEESSCCEECCGGGCCSSSCCCTTTTCEESCEEEEEEETTEEEEETTTBCCSC-CCCCEECCC
T ss_pred CccCEEEEeCCCCEEECHHHccccCCCCCCCCCEEeeEEEEEEECCEEEEecCCeEccC-CCceeecCC
Confidence 999999999999999999999999999999999999999999999999999 9999986 689999864
No 7
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-55 Score=464.31 Aligned_cols=467 Identities=49% Similarity=0.858 Sum_probs=386.1
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCc----eEEecCCCEEeecccccccccccccCCCCchhhh
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDV----KVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDF 127 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~----~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~ 127 (535)
+.+++|+|++|++++...+++|+|+||+|++|++....+.+. ++||++|++|+|||||+|+|+...+.+..+++++
T Consensus 26 ~~~~lI~ng~Vv~~~~~~~~dV~I~dGrI~~Ig~~~~~~~~~~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~~~~~~e~~ 105 (541)
T 2vr2_A 26 PSRLLIRGGRVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHMQFPFMGSRSIDDF 105 (541)
T ss_dssp -CEEEEESCEEECSSCEEECEEEEETTEEEEEEC-----------CEEEECTTSEEEECEEEEEECTTCBCSSSBCSCCT
T ss_pred cCCEEEECcEEEcCCCceEeeEEEECCEEEEeccCCCCCcccccCceEEECCCCEEccCEEEecccCCCCCCCCcCHHHH
Confidence 367999999999987767899999999999999864333233 8999999999999999999998775444566778
Q ss_pred HHHHHHHHhCCcEEEeccccCCC-CChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEee
Q 009410 128 FSGQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (535)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (535)
+...+.++++||||++|+..+.. ....+.++.+..... ....+++++........+..+++..+.++.|+..+|+++.
T Consensus 106 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~el~~l~~~~G~~~~k~~~~ 185 (541)
T 2vr2_A 106 HQGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADPKVCCDYSLHVAVTWWSDQVKEEMKILVQDKGVNSFKMFMA 185 (541)
T ss_dssp THHHHHHHTTTEEEEEEEECCCTTCCHHHHHHHHHHHHTTTCSSEEEEEEEECSCSHHHHHHHHHHHHTSCCCEEEEESS
T ss_pred HHHHHHHHhCCeeeeccccCCCCCCCHHHHHHHHHHHhccCceEEEeeeecccCCCHHHHHHHHHHHHhCCCCEEEEEec
Confidence 88888999999999999865432 245666666555432 2455666666655555666677777775579999999998
Q ss_pred cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCC
Q 009410 206 YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285 (535)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (535)
+++...++.+.++++++.|++++.++.+|+++........+.+.+.|+..+.+|...++...+...+.+++.++...+.+
T Consensus 186 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p 265 (541)
T 2vr2_A 186 YKDLYMVTDLELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKMLALGITGPEGHELCRPEAVEAEATLRAITIASAVNCP 265 (541)
T ss_dssp STTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCccCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccchhHHHHHHHHHHHHHHHHhCCC
Confidence 88777889999999999999999999999988776667778888999999888888888888888888999999999999
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCC-cccHHHHHHHHhcCCeEEE
Q 009410 286 LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA-SGHNKALQAALATGILQLV 364 (535)
Q Consensus 286 ~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~-~~~~~~~~~~l~~Gv~~~l 364 (535)
+++.|+.+....+.++.+++.|+.++++++++++.++...+....|..+..++++||+|. ..+.+.+++++..|+..++
T Consensus 266 ~~~~h~ss~~~~~~i~~ar~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~g~~~~~ 345 (541)
T 2vr2_A 266 LYIVHVMSKSAAKVIADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTTT 345 (541)
T ss_dssp EEEEEECCHHHHHHHHHHHHTTCCEEEEEBHHHHHCCSGGGGCSSHHHHHTTCCSSCCCSCTTHHHHHHHHHHTTSSCCC
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCeEEEEeehhhhcCCHHHhcCccccccCceEECCCCCCCcchHHHHHHHHhcCCeEEE
Confidence 999999987777888888999999988888877777766554444444456678899997 4677889999999999999
Q ss_pred eCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccE
Q 009410 365 GTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADI 441 (535)
Q Consensus 365 gtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADl 441 (535)
|||+.++....+....+.|..+|+ |++..+..++..+++.++++++++++++|.|||++||+++++|+|++|++|||
T Consensus 346 gtD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~T~~pA~~lgl~~~~G~i~~G~~ADl 425 (541)
T 2vr2_A 346 GTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADI 425 (541)
T ss_dssp BCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCE
T ss_pred EeCCCCCChHHhcccCCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCCccCCCCCCCE
Confidence 999999888766655567887876 77888888887778888899999999999999999999878999999999999
Q ss_pred EEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCCCcc-cccCchhhhH
Q 009410 442 IIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNY-LFHGLDKADA 518 (535)
Q Consensus 442 vvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 518 (535)
||+|.+..+.++.+.+.+...|+||+|..+.++|+.||++|++||++|+++...+.|++++++++.+ ++.++.++++
T Consensus 426 vv~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 503 (541)
T 2vr2_A 426 VIWDPKGTRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRGKVVYEAGVFSVTAGDGKFIPRKPFAEYIYKRIKQRDR 503 (541)
T ss_dssp EEEEEEEEEECCTTTCSSSCSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCSCBCCCCSSCHHHHHHHHHHHH
T ss_pred EEEcCCcCeEeCHHHhhcccCCCccCCCEEeeeEEEEEECCEEEEECCeeccCCCCceEecCCCCcchhhhhHHHHHh
Confidence 9999999999999999999999999999999999999999999999999998888999999998764 5666654444
No 8
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=100.00 E-value=2.3e-55 Score=462.46 Aligned_cols=467 Identities=44% Similarity=0.793 Sum_probs=379.6
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHH
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~ 131 (535)
+++++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+.....+..+++++....
T Consensus 25 ~~~~li~n~~v~~~~~~~~~~V~I~~grI~~Ig~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~ 104 (501)
T 2vm8_A 25 SDRLLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDFFQGT 104 (501)
T ss_dssp CCCEEEEEEEEECSSCEEEEEEEEETTEEEEEESSCCCCSSSCEEECTTCEEEECEEEEEECTTCEETTEECSSCHHHHH
T ss_pred cCCEEEEeeEEECCCCceEeeEEEECCEEEEeccCCCCCCCCeEEECCCCEEeeCEEEeeecccccccCCCcHHHHHHHH
Confidence 35799999999998776779999999999999986543445789999999999999999999976632334567788888
Q ss_pred HHHHhCCcEEEeccccCCC-CChHHHHHHHHHHhcc-cccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCC
Q 009410 132 AAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (535)
+.++++||||++|+..... ......++.......+ ....++++........+..+++.++.++.|+..+|+++.+...
T Consensus 105 ~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~l~~~~G~~~i~~~~~~~~~ 184 (501)
T 2vm8_A 105 KAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLHVDISEWHKGIQEEMEALVKDHGVNSFLVYMAFKDR 184 (501)
T ss_dssp HHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESSSTTT
T ss_pred HHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHHhcCCeeEEEEEEEecCCCcccHHHHHHHHHhCCceEEEEeeccCCC
Confidence 8999999999999865433 2345555555444432 3445555554444444455667777655799999998877655
Q ss_pred CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEE
Q 009410 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (535)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (535)
...+.+.++++++.|+++++++.+|++...........+.+.|...+.+|...+|...+...+.+.+.++...+.++|+.
T Consensus 185 ~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~g~~~hi~ 264 (501)
T 2vm8_A 185 FQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYIT 264 (501)
T ss_dssp TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHTTTCCSTHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 67789999999999999999999999987666677777888999998999988998888888999999999999999999
Q ss_pred EccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCc-ccHHHHHHHHhcCCeEEEeCCC
Q 009410 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS-GHNKALQAALATGILQLVGTDH 368 (535)
Q Consensus 290 H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~-~~~~~~~~~l~~Gv~~~lgtD~ 368 (535)
|+......+.++.+++.|+.+++.++++++.++...+....+..+..++..||.|.. ....++++++++|+.+++|||+
T Consensus 265 h~~~~~~~~~i~~~~~~G~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~~l~~~l~~G~~~~~gtD~ 344 (501)
T 2vm8_A 265 KVMSKSSAEVIAQARKKGTVVYGEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAH 344 (501)
T ss_dssp EECCHHHHHHHHHHHHTTCCEEEEEBHHHHHCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSCCCBCCB
T ss_pred eCCcHHHHHHHHHHHhCCCcEEEEEChhHhhcChhhhcccccccCceEEECCCCCCCcchHHHHHHHHhcCceEEEEecC
Confidence 999988778888889999988777777777776655433222222345677888875 5678899999999999999999
Q ss_pred CCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEc
Q 009410 369 CAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 445 (535)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld 445 (535)
.+++...++...++|...|. |.++.+..+++.+++.+++|++++++++|.|||+++|+++++|+|++||.|||||+|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d 424 (501)
T 2vm8_A 345 CTFNTAQKAVGKDNFTLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWD 424 (501)
T ss_dssp CCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSCCCTTSBCCEEEEE
T ss_pred CCCChhhhhcccCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHHhCCCCCCCccCCCCcCCEEEEc
Confidence 88876665544456665554 677777777766777778999999999999999999998789999999999999999
Q ss_pred CCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCCCc-ccccCchhhhH
Q 009410 446 PNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFN-YLFHGLDKADA 518 (535)
Q Consensus 446 ~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 518 (535)
.++++.++..++.+...|+||++....++|..||++|++||++|+++...+.|++++++.+. +++.++++++.
T Consensus 425 ~~~~~~~~~~~~~s~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~ 498 (501)
T 2vm8_A 425 PDSVKTISAKTHNSSLEYNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRKPFPDFVYKRIKARSR 498 (501)
T ss_dssp EEEEEECCTTTSSSSCSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCSSCHHHHHHHHHHHH
T ss_pred CCCCeeeccccccccccCCCccCcEeCceEEEEEECCEEEEECCeEccCCCCCceecCCCCCchHHHHHHHHhh
Confidence 99999999999999999999999998899999999999999999999777789999999977 69888887763
No 9
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=2e-53 Score=443.00 Aligned_cols=449 Identities=39% Similarity=0.667 Sum_probs=361.2
Q ss_pred cEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHH
Q 009410 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~ 133 (535)
+++|+|++|++++...+++|+|+||+|++|++... .+.++||++|++|+|||||+|+|+.........+++++...+.
T Consensus 2 ~~li~n~~v~~~~~~~~~~v~I~~g~I~~ig~~~~--~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~ 79 (457)
T 1nfg_A 2 DIIIKNGTIVTADGISRADLGIKDGKITQIGGALG--PAERTIDAAGRYVFPGGIDVHTHVETVSFNTQSADTFATATVA 79 (457)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTEEEEESSCCC--CCSEEEECTTCEEEECEEEEEECCSCEETTEECSCCHHHHHHH
T ss_pred cEEEEeeEEEeCCCceeeeEEEECCEEEEecCCCC--CCCeEEeCCCCEEccceEeeccccccCcCCCCChhhHHHHHHH
Confidence 58999999999877678899999999999997542 3578999999999999999999997432122256677778888
Q ss_pred HHhCCcEEEeccccCCC-CChHHHHHHHHHHhc-ccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCc
Q 009410 134 ALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (535)
Q Consensus 134 ~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (535)
++++||||++|+..... ....+.++....... ....+++++......+.+..++++++. +.|+..+|+++++.....
T Consensus 80 ~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~k~~~~~~~~~~ 158 (457)
T 1nfg_A 80 AACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIVLDPTDSVIEELEVLP-DLGITSFKVFMAYRGMNM 158 (457)
T ss_dssp HHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSSCCHHHHHHTTTGG-GGTCCEEEEESSSTTTTB
T ss_pred HHhCCcEEEEeCCCCCCCCChHHHHHHHHHHhcccCccCEEEEEeecCCchhHHHHHHHHH-HcCCCEEEEeeccCCCCC
Confidence 99999999999865322 245666666555443 244556666655555544445555554 679999999887654344
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
.+.+.+.++++.+++.+.++.+|++.........+.+...|......|....|..++.+.+.++++++++.+.++++.|+
T Consensus 159 ~~~~~~~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~H~ 238 (457)
T 1nfg_A 159 IDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVNAPIYIVHV 238 (457)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECCC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEeCCCHHHHHHHHHHHHhcCCcchhhccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeC
Confidence 57888999999999999999999998877767777777888877677777788888889999999999999999999999
Q ss_pred cCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCC
Q 009410 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (535)
Q Consensus 292 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~ 371 (535)
.+....+.+..+++.|+.++++.++|+++++++.+....+ .+..++..|+.|......++++++++|+++++|||+.++
T Consensus 239 ~~~~~~~~~~~~~~~G~~v~~~~~~h~~~~~~~~~~~~~~-~~~~~~~~p~~r~~~~~~~~~~~~~~G~~~~~gtD~~~~ 317 (457)
T 1nfg_A 239 TCEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDF-EGAKYVFTPPARAKKDHDVLWNALRNGVFETVSSDHCSW 317 (457)
T ss_dssp CSHHHHHHHHHHHHHTCCEEECEEGGGGTCCGGGGGCTTT-GGGGGCCSSCCCCHHHHHHHHHHHHTTCCSCEECCBCCC
T ss_pred CcHHHHHHHHHHHHcCCeEEEEEchHHhEeCHHHhccccc-cCceeEEcCCCCCHHHHHHHHHHHhCCCeEEEecCCCCC
Confidence 8877667787777889889888889998888777654322 245667788888888889999999999999999998776
Q ss_pred Chh-hhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCC
Q 009410 372 NST-QKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPN 447 (535)
Q Consensus 372 ~~~-~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~ 447 (535)
+.. .+..+.++|...|. |.++.+...+ .+++.+++|++++++++|.|||++||+++++|+|++||+|||||+|.+
T Consensus 318 ~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~~-~~~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~ 396 (457)
T 1nfg_A 318 LFKGHKDRGRNDFRAIPNGAPGVEERLMMVY-QGVNEGRISLTQFVELVATRPAKVFGMFPQKGTIAVGSDADIVLWDPE 396 (457)
T ss_dssp CTTTTTTTTTTCGGGSCCCBCCTTTHHHHHH-HHHHTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCSTTSBCCEEEEEEE
T ss_pred ChHHhhhcccCCHhHCCCCcccHHHHHHHHH-HHHHcCCCCHHHHHHHHhhhHHHHhCCCCCCcCcCCCCccCEEEEeCC
Confidence 543 22211135555554 5677777766 566677799999999999999999999778999999999999999999
Q ss_pred CceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCCCc
Q 009410 448 SSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFN 507 (535)
Q Consensus 448 ~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~~~ 507 (535)
+++.++.+++.+...|+||+|....++|+.||++|++||++|+++...+.|++++++.|+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~~ 456 (457)
T 1nfg_A 397 AEMVIEQTAMHNAMDYSSYEGHKVKGVPKTVLLRGKVIVDEGSYVGEPTDGKFLKRRKYK 456 (457)
T ss_dssp EEEECCGGGSCSSCSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTSCCBCCCCSCC
T ss_pred CCEEecHHHccCCCCCCCccCCEecceEEEEEECCEEEEECCccccCCCCCeeeCCCCCC
Confidence 999999999999999999999999999999999999999999999987779999887553
No 10
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=100.00 E-value=3.5e-53 Score=439.60 Aligned_cols=426 Identities=27% Similarity=0.399 Sum_probs=363.2
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeC--CCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHH
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQP--NINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~--~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~ 129 (535)
.++++|+|++|+++++..+++|+|+||+|++|++ ... +.+.++||++|++|+|||||+|+|+... +....+.+..
T Consensus 5 ~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~-~~~~~~id~~g~~v~PG~ID~H~H~~~~--~~~~~~~~~~ 81 (448)
T 3hm7_A 5 RFDLIIRSSTVVTETTTYRADVAIRNGIVSAITEPGSIS-SDDGPAIDGTGLHLFPGMVDVHVHFNEP--GRTEWEGFAS 81 (448)
T ss_dssp CCSEEEEEEEEECSSCEEEEEEEEETTEEEEEESTTCSC-TTSSCEEECTTCEEEECEEEEEECCCTT--TSGGGCCSHH
T ss_pred cccEEEEeeEEECCCCceEeEEEEECCEEEEeeCccCCC-CCCCeEEECCCCEEecCEEEeeeccCCC--CCCcHhHHHH
Confidence 5689999999999887788999999999999998 433 3468899999999999999999999877 5556677888
Q ss_pred HHHHHHhCCcEEEeccc-cCCCC-ChHHHHHHHHHHh-cccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeec
Q 009410 130 GQAAALAGGTTMHIDFV-IPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (535)
..+.++++|||+++++. ..... .....++...... .....++.++.+..... .+++.++. +.|+.++|+++++
T Consensus 82 ~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~l~-~~g~~~~~~~l~~ 157 (448)
T 3hm7_A 82 GSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGN---IDHLQDLH-DGGVIGFKAFMSE 157 (448)
T ss_dssp HHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTC---GGGHHHHH-HTTCSEEEEESSS
T ss_pred HHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecccC---HHHHHHHH-HcCCCEEEEeecc
Confidence 88999999999999986 43322 3344444433333 22455666665554333 44566666 5799999999887
Q ss_pred CCC---CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcC
Q 009410 207 KGS---FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283 (535)
Q Consensus 207 ~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (535)
... ...+.+.+.++++.|+++|+++.+|+++........+.+...|......|...+|...+..++.+++.+++..+
T Consensus 158 ~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g 237 (448)
T 3hm7_A 158 CGTDDFQFSHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTC 237 (448)
T ss_dssp CSSSSSCCCCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCccCcCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhC
Confidence 543 45589999999999999999999999988777766677788899988888899999999999999999999999
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEE
Q 009410 284 TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQL 363 (535)
Q Consensus 284 ~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~ 363 (535)
.++++.|.+....++.++.+++.|+.++++.++++++++.+.+.. .+..+++.||+|...++.+++++++.|+.++
T Consensus 238 ~~~~i~H~s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~g~~~~ 313 (448)
T 3hm7_A 238 CPIHICHVSSRKVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAE----IGYLAKCAPPLRERQEVEDLWDGLMAGEIDL 313 (448)
T ss_dssp CCEEECCCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHH----HCSTTCCSSCCCCHHHHHHHHHHHHHTCCCE
T ss_pred CCEEEEeCCCHHHHHHHHHHHhcCCCEEEEechHHHccCHHHhcC----CCCeEEEcCCCCCHHHHHHHHHHHhcCCccE
Confidence 999999999999999999999999999999999999998877643 2467889999999999999999999999999
Q ss_pred EeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCcc
Q 009410 364 VGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDAD 440 (535)
Q Consensus 364 lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~AD 440 (535)
++||+.|++...+..+ +|...|+ |++..+..+++.++...+++++++++++|.|||+++|+++++|+|++|+.||
T Consensus 314 i~tD~~p~~~~~k~~~--~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~~A~~~g~~~~~g~l~~G~~Ad 391 (448)
T 3hm7_A 314 ISSDHSPSLPQMKTGK--TIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLTQIVQLLSTEPAKRFGLYPQKGTIQVGAEAS 391 (448)
T ss_dssp ECCCBCCCCGGGGCCS--STTTSCCCBCCTTTHHHHHHHHTTTTTCCCHHHHHHHHTHHHHHHHTCTTTSSCCSTTSBCC
T ss_pred EEeCCCCCCHHHcccC--CHhhCCCCCccHHHHHHHHHHHHHhcCCcCHHHHHHHHhHHHHHHcCCCCCCCcccCCCcCC
Confidence 9999999988876532 4777775 7788898888777778889999999999999999999988899999999999
Q ss_pred EEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCe
Q 009410 441 IIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDE 490 (535)
Q Consensus 441 lvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~ 490 (535)
|||+|.+.++.++.+++.+...|+||+|..+.++|.+||++|++||++++
T Consensus 392 ~~~~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~~~G~~v~~~~~ 441 (448)
T 3hm7_A 392 FTLIDLNESYTLNASDLYYRHPISPYVGQRFRGKVKHTICQGKHVYQDHE 441 (448)
T ss_dssp EEEEEEEEEEECCGGGCCSSSCCCTTTTCEEEEEEEEEEETTEEEEECC-
T ss_pred EEEEeCCCCEEEChHhcccccCCCCCCCCEEEEEEEEEEECCEEEEECCC
Confidence 99999999999999999999999999999999999999999999999875
No 11
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=1.3e-52 Score=437.02 Aligned_cols=445 Identities=27% Similarity=0.373 Sum_probs=349.0
Q ss_pred ccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCC-CCchhhhHHHH
Q 009410 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-SETIDDFFSGQ 131 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g-~~~~~~~~~~~ 131 (535)
.+++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+... + ..+++++....
T Consensus 2 ~~~li~~~~v~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~~~~~~~~~ 79 (458)
T 1gkr_A 2 FDVIVKNCRLVSSDGITEADILVKDGKVAAISADTSDVEASRTIDAGGKFVMPGVVDEHVHIIDM--DLKNRYGRFELDS 79 (458)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEETTEEEEEESCCTTCCEEEEEECTTCEEEECEEEEEEECCCG--GGTTTSCCHHHHH
T ss_pred ceEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCCCCCeEEeCCCCEEecCEEEeeecccCC--CCCCchhHHHHHH
Confidence 46899999999987667899999999999999864333456899999999999999999999865 3 33556677778
Q ss_pred HHHHhCCcEEEeccc-cCCC-CChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCC-
Q 009410 132 AAALAGGTTMHIDFV-IPIN-GSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG- 208 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~- 208 (535)
+.++++||||++|+. .... ....+.++...+.......+++++.+... +..+++.++. +.|+..+|++++++.
T Consensus 80 ~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~g~~~i~~~~~~~~~ 155 (458)
T 1gkr_A 80 ESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVDFALYGGGVP---GNLPEIRKMH-DAGAVGFKSMMAASVP 155 (458)
T ss_dssp HHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEEEEECCT---TCHHHHHHHH-HTTCCEEEEESSCSBT
T ss_pred HHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCceeEEEEeccCC---CCHHHHHHHH-HcCCcEEEEeecccCC
Confidence 888999999999986 3222 12344444443333221144444433221 2345666766 568999999887653
Q ss_pred --CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCE
Q 009410 209 --SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (535)
Q Consensus 209 --~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (535)
....+.+.++++++.|+++++++.+|++...........+...|......|....+...+.+.+.+++.++...+.++
T Consensus 156 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G~~~~~~h~~~~~~~~~~~~~~~~~~la~~~g~~~ 235 (458)
T 1gkr_A 156 GMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAGCRL 235 (458)
T ss_dssp TTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHCCEE
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhcCccchhhccccCCHHHHHHHHHHHHHHHHHhCCCE
Confidence 356789999999999999999999999877665555566667787666677777787788888899999999999999
Q ss_pred EEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeC
Q 009410 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (535)
Q Consensus 287 ~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgt 366 (535)
|+.|++.....+.+..+++.|++++++.++++++++++.+.. .+..++..||.|......++++++++|+++++||
T Consensus 236 h~~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~----~~~~~~~~pp~r~~~~~~~l~~~~~~G~~~~lgt 311 (458)
T 1gkr_A 236 IVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAER----IGPYMKVAPPVRSAEMNIRLWEQLENGLIDTLGS 311 (458)
T ss_dssp EECCCCSHHHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHH----HGGGGCCSSCCCCHHHHHHHHHHHHHTCCCEECC
T ss_pred EEEeCCCHHHHHHHHHHHHCCCcEEEEEchHHheeCHHHhhc----cCceEEEcCCCCCHHHHHHHHHHHhCCCceEEEe
Confidence 999999876667777777789888888888888777665532 2345567889998888999999999999999999
Q ss_pred CCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEE
Q 009410 367 DHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIII 443 (535)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvv 443 (535)
|+.+++...+..+..+++..+. |.+..+...++.+++.+++|++++++++|.|||+++|+++++|+|++||+|||||
T Consensus 312 D~~~~~~~~k~~g~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv 391 (458)
T 1gkr_A 312 DHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAKLFGIYPQKGTLQVGSDADLLI 391 (458)
T ss_dssp CEECCCGGGTGGGGTCGGGSCCCBCCTTTHHHHHHHHTGGGTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEE
T ss_pred CCCCCChHHhccccCCHhHCCCCcccHHHHHHHHHHHHHHhCCCCHHHHHHHHhhhHHHHhCCCCCCccCCCCCcCCEEE
Confidence 9877765533211124444443 6666777777667777789999999999999999999977899999999999999
Q ss_pred EcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecCCCc
Q 009410 444 FNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFN 507 (535)
Q Consensus 444 ld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~~~~ 507 (535)
+|.++++.++.+++.+...|+||+|..+.++|..||++|++||++|+++...+.|++++++.+.
T Consensus 392 ~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~~ 455 (458)
T 1gkr_A 392 LDLDIDTKVDASQFRSLHKYSPFDGMPVTGAPVLTMVRGTVVAEKGEVLVEQGFGQFVTRRNYE 455 (458)
T ss_dssp EESCCCEECCGGGCSSSCCCCTTTTCEECCEEEEEEETTEEEEETTEECSCTTCCCBCCC----
T ss_pred EcCCcceEEcHHHccccCCCCCcCCCEeeeEEEEEEECCEEEEECCccccCCCCCeecCCcccc
Confidence 9999999999999999999999999998999999999999999999999987779999876653
No 12
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.9e-52 Score=428.87 Aligned_cols=417 Identities=25% Similarity=0.371 Sum_probs=337.4
Q ss_pred EEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHHH
Q 009410 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (535)
Q Consensus 55 ~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~ 134 (535)
++|+|++|++.....+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+... +....+.+....+.+
T Consensus 2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~iD~H~H~~~~--g~~~~~~~~~~~~~~ 79 (424)
T 3gri_A 2 KLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVHLREP--GGEYKETIETGTKAA 79 (424)
T ss_dssp EEEESCEEEETTEEEECEEEEETTEEEEEESCCCCCSSCEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHHHHHHHH
T ss_pred EEEEeeEEEcCCCceeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEEeCeEEeeecCCCC--CCCCHHHHHHHHHHH
Confidence 789999999943347899999999999999876545578999999999999999999999876 667788888889999
Q ss_pred HhCCcEEEeccccCCCC-ChHHHHHHHHHHhcc-cccccceeeeeecC-ChhhHHHHHHHHHHcCCCEEEEEeecCCCCc
Q 009410 135 LAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITKW-DEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (535)
Q Consensus 135 l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (535)
+++|||+++++....+. .....++...+.... ...++..+...... ..+...++.++. ..|...+ .+.+.+.
T Consensus 80 ~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~-~~G~~~~----~~~~~~~ 154 (424)
T 3gri_A 80 ARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALV-KEGAFAF----TDDGVGV 154 (424)
T ss_dssp HHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESBGGGCSSSBCCHHHHH-TTTCCCE----EECSSCC
T ss_pred HhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCCceEEEEEEEecCCCcchHHHHHHHH-hcCcEEE----ecCCcCc
Confidence 99999999998654332 334444444333322 33344444333321 222334455555 5666655 3345567
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
.+.+.++++++.|+++|+++.+|+++........ ...|......+...+|...+...+.+.+.++++.+.++++.|+
T Consensus 155 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~---~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~ 231 (424)
T 3gri_A 155 QTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGA---MHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHV 231 (424)
T ss_dssp CSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTCC---EESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhh---hhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 7899999999999999999999998765321000 0001111122334578888889999999999999999999999
Q ss_pred cCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCC
Q 009410 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (535)
Q Consensus 292 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~ 371 (535)
++....+.++.+++.|+.++++.++++++++.+.+.. .+..+++.||+|...++.++++++++|..++++|||.|+
T Consensus 232 s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~igtDhap~ 307 (424)
T 3gri_A 232 STKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPG----NNAIYKMNPPLRSTEDREALLEGLLDGTIDCIATDHAPH 307 (424)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCS----SCGGGCCSSCCCCHHHHHHHHHHHHTTSSCEECCCBCCC
T ss_pred CCHHHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhC----cCceEEEeCCCCCHHHHHHHHHHHhcCCceEEEcCCCCC
Confidence 9999999999999999999999999999999887753 246788999999999999999999999999999999999
Q ss_pred ChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCC
Q 009410 372 NSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS 448 (535)
Q Consensus 372 ~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~ 448 (535)
+...+. .+|...|+ |++..++.++..++..+++|++++++++|.|||+++|+ ++|+|++|+.|||||+|.+.
T Consensus 308 ~~~~k~---~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~--~~g~l~~G~~Ad~~~~d~~~ 382 (424)
T 3gri_A 308 ARDEKA---QPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETFNL--EYGTLKENGYADLTIIDLDS 382 (424)
T ss_dssp CHHHHT---SCTTTSCCCCCCTTTHHHHHHHHHTTTSSCCHHHHHHHHTHHHHHHTTC--SCSCCCTTSBCCEEEEESSC
T ss_pred CHHHcc---CCHhHCCCCCccccccHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCC--CCCcccCCCcCCEEEEcCCC
Confidence 988775 37888876 88889999888888888899999999999999999999 58999999999999999999
Q ss_pred ceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCe
Q 009410 449 SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDE 490 (535)
Q Consensus 449 ~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~ 490 (535)
++.++++++.++..|+||+|..+.++|.+||++|++||++|+
T Consensus 383 ~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~~~G~~v~~~g~ 424 (424)
T 3gri_A 383 EQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKFEGDK 424 (424)
T ss_dssp CEECCGGGCSSSCCCCTTTTCEESCEEEEEEETTEEEEEC--
T ss_pred CEEEchhhcccccCCCCcCCCEEeeeEEEEEECCEEEEeCCC
Confidence 999999999999999999999999999999999999999985
No 13
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=100.00 E-value=4.6e-51 Score=421.10 Aligned_cols=419 Identities=25% Similarity=0.380 Sum_probs=335.4
Q ss_pred cEEEEccEEEcCCC-ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHH
Q 009410 54 KILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (535)
Q Consensus 54 ~~vi~n~~vi~~~~-~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~ 132 (535)
+++|+|++|++... ..+++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+... +....+.+....+
T Consensus 2 ~~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~v~PG~iD~H~H~~~~--~~~~~~~~~~~~~ 78 (428)
T 3mpg_A 2 NYLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENIT-ADNAEVIDVNGKLIAPGLVDVHVHLREP--GGEHKETIETGTL 78 (428)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEESSBEEECCSSCC-CTTSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHHHHHH
T ss_pred cEEEEeeEEEeCCCCeeeeeEEEECCEEEEecCCCC-CCCCeEEECCCCEEeeCEEEEeeccCCC--CCCchhHHHHHHH
Confidence 68999999997544 468999999999999998654 3468999999999999999999999876 6667788888899
Q ss_pred HHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcc-cccccceeeeeecC-ChhhHHHHHHHHHHcCCCEEEEEeecCCC
Q 009410 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITKW-DEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (535)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (535)
.++++||||++++....+. .....++...+.... ....+..+...... ..+...++.++. ..|...+ .+.+.
T Consensus 79 ~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-~~G~~~~----~~~~~ 153 (428)
T 3mpg_A 79 AAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLK-ELGAFAF----TDDGV 153 (428)
T ss_dssp HHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEESBGGGCSSSBCCHHHHH-HTTCCCE----ECTTS
T ss_pred HHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCCcEEEEEeeEecCCCcchHHHHHHHH-HhCCEEE----ECCCc
Confidence 9999999999998654332 233344433333221 22333333222221 122333455555 5577665 34455
Q ss_pred CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEE
Q 009410 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (535)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (535)
+..+.+.++++++.|+++|+++.+|+++........ ...|......+...+|...+...+.+.+.+++..+.++++.
T Consensus 154 ~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~---~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i~ 230 (428)
T 3mpg_A 154 GVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGC---VHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVC 230 (428)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCTTCS---EETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCCHHHHHHHHHHHHhcCCeEEEECCChhHhhhHH---hhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 667899999999999999999999998764321000 00011111223345788888889999999999999999999
Q ss_pred EccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCC
Q 009410 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (535)
Q Consensus 290 H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~ 369 (535)
|+++....+.++.+++.|+.++++.++++++++.+.+.. .+..++++||.|...++.++++++.+|+..+++||+.
T Consensus 231 H~s~~~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~tDh~ 306 (428)
T 3mpg_A 231 HVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPS----ADPNFKMNPPLRGKEDHEALIEGLLDGTIDMIATDHA 306 (428)
T ss_dssp SCCCHHHHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCS----SCGGGCCSSCCCCHHHHHHHHHHHHHTSSCCBCCCBC
T ss_pred eCCCHHHHHHHHHHHhcCCCEEEEEchHHhEECHHHHhC----CCCeEEEeCCCCCHHHHHHHHHHHhCCCCcEEEcCCC
Confidence 999998889999999999999999999999999887753 3477889999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcC
Q 009410 370 AFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNP 446 (535)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~ 446 (535)
|++...+.. +|...|+ |++..++.+++.++..+++|++++++++|.|||++||++ .|+|++|+.|||||+|.
T Consensus 307 p~~~~~k~~---~~~~~p~g~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~--~g~i~~G~~Ad~~~~d~ 381 (428)
T 3mpg_A 307 PHTAEEKAQ---GIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGLE--AGRLKEGRTADITIIDL 381 (428)
T ss_dssp CCCTTGGGS---CTTTSCSCCCCTTTHHHHHHHHTTTTTSSCHHHHHHTTTHHHHHHHTCS--CSCCCTTSBCCEEEEES
T ss_pred CCCHHHccc---CHhhCCCCceehhhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC--CccccCCCcCCEEEEcC
Confidence 998877654 5777776 888899998877777888999999999999999999994 89999999999999999
Q ss_pred CCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeec
Q 009410 447 NSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELN 492 (535)
Q Consensus 447 ~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~ 492 (535)
+.++.++.+++.++..|+||+|..+.++|.+||++|++||++|+++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~t~v~G~~v~~~g~~~ 427 (428)
T 3mpg_A 382 EQEEEIDPTTFLSKGKNTPFAGWKCQGWPVMTIVGGKIAWQKESAL 427 (428)
T ss_dssp SCCEECCGGGCSSSCCCCSCTTCEECCEEEEEEETTEEEEECSCC-
T ss_pred CCCEEEchhhccccCCCCCcCCCEEeeEEEEEEECCEEEEeCCccc
Confidence 9999999999999999999999999999999999999999999875
No 14
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=100.00 E-value=9.8e-49 Score=406.16 Aligned_cols=431 Identities=20% Similarity=0.287 Sum_probs=330.2
Q ss_pred ccEEEEccEEEcCCCceeeeEEEeCCEEEEeeC-CCCC---CCCceEEecCCCEEeecccccccccccccCCCCchhhhH
Q 009410 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQP-NINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~-~~~~---~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~ 128 (535)
++++|+|++|++++...+++|+|+||+|++|++ .... +.+.++||++|++|+|||||+|+|+... +..+.+.+.
T Consensus 4 m~~li~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~e~~~ 81 (452)
T 2gwn_A 4 MKILLRNALITNEGKTFPGSVMIDGAFISRIIEGELPADDNLSADEVIECSGLRLFPGCIDDQVHFREP--GLTHKATIA 81 (452)
T ss_dssp SEEEEEEEEEEETTEEEEEEEEEETTEEEEEEESCCCTTCCTTCSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHH
T ss_pred ccEEEECeEEECCCceeeeeEEEECCEEEEEecCCCccccCCCCCeEEeCCCCEEecCEEeeccccCCC--CCCcHHHHH
Confidence 468999999999876678899999999999997 5432 2356899999999999999999999866 555677788
Q ss_pred HHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHh-cccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeec
Q 009410 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (535)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (535)
...+.++++||||++|+....+. .....++...+.. ....++++++....... .+++.++. ..|..++|.++.+
T Consensus 82 ~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~-~~g~~g~k~~~~~ 157 (452)
T 2gwn_A 82 SESRAAVAGGVTSFMDMPNTNPPTTMWERLLEKRQIGADTAWANYGFFFGGTNDN---IDEIKRVD-KHLVPGLKLFLGS 157 (452)
T ss_dssp HHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEECCSSC---HHHHHTCC-TTSCSCEEEESSS
T ss_pred HHHHHHHhCCeEEEEcCCCCCCCCChHHHHHHHHHHhhccCcccEEEEEeecCCC---HHHHHHHH-HcCCCEEEEEecc
Confidence 88889999999999999643332 2344444433333 23556666665544332 23444443 4578889998765
Q ss_pred CC--CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHH-HHcCC-CCcccccccCChhhHHHHHHHHHHHHHhc
Q 009410 207 KG--SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRM-IELGI-TGPEGHALSRPPLLEGEATTRAIRLAEFV 282 (535)
Q Consensus 207 ~~--~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~-~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (535)
.. .+..+.+.+++.++.+ +.++..|++...........+ ...|. ..+..|...+|...+.+.+.++++++++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~---~~~~~~h~~~~~~~~~~~~~~~~~~G~~~~~~~h~~~~~~~~~~~~l~~~~~la~~~ 234 (452)
T 2gwn_A 158 STGNMLVDNKETLEKIFGEC---DLLIATHCEKEEIIRANKEHYKAKYGNDLDIHFHPLIRSEEACYRSSAEAVELAERM 234 (452)
T ss_dssp CCGGGBCCCHHHHHHHHHHC---CSCEEEECCCHHHHHHHHHHHHHHHCSCCCGGGHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHc---CCEEEEcCCCHHHHHhHHhhhhhhcCcccchhhccccCChHHHHHHHHHHHHHHHHh
Confidence 31 1233567777666544 778899998776555544433 44554 44555656678888889999999999999
Q ss_pred CCCEEEEEccCHHHHHHHHH---HHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcC
Q 009410 283 NTPLYVVHVMSMDAMEEIAK---ARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG 359 (535)
Q Consensus 283 ~~~~~~~H~~~~~~~~~~~~---~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~G 359 (535)
+.++++.|+++....+.+.. +++. +++++.++|+++++++.+.. .+..++..|+.+......++++++++|
T Consensus 235 g~~v~i~H~~~~~~~~~~~~~~a~~~~--~v~~~~~~h~~~l~~~~~~~----~g~~~~~~P~lr~~~~~~~l~~~l~~G 308 (452)
T 2gwn_A 235 NARLHILHLSTEKELSLFRNDIPTAQK--RITSEVCVHHLWFSDTDYGR----LGNRIKWNPAIKKESDREALRAAVRNG 308 (452)
T ss_dssp TCCEEECCCCCTGGGGGSCCSSCGGGC--SEEEEEEHHHHHCCGGGHHH----HGGGGCCSSCCCCHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCHHHHHHHHHhhcccCC--CeEEEEchHHhhcCHHHHhc----cCceEEECCCCCCHHHHHHHHHHHHCC
Confidence 99999999986554444433 1222 57777888888888776643 345667788888888889999999999
Q ss_pred CeEEEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCC
Q 009410 360 ILQLVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVG 436 (535)
Q Consensus 360 v~~~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~G 436 (535)
+++++|||+.+++...+. .+|+.+|+ |+++.+...+. .+...++|++++++++|.|||+++|++ ++|+|++|
T Consensus 309 v~~~lgTD~~~~~~~~k~---~~~~~~~~g~~~~e~~~~~~~~-~~~~~~ls~~~~l~~~T~~~A~~lgl~-~~G~l~~G 383 (452)
T 2gwn_A 309 RIDIIATDHAPHLLREKE---GSCLQAASGGPLVQHSLLALLE-LCNQGIFSIEEIVSKTAHIPATLFAIE-KRGYIRPG 383 (452)
T ss_dssp SSCEEECCBCCCCHHHHC---SCTTTSCCCCCCTTTHHHHHHH-HHHTTSSCHHHHHHHHTHHHHHHHTBT-TCSSCCTT
T ss_pred CceEEEeCCCCCChHHhc---CChhhCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHHHhHhHHHHcCCC-CCCcccCC
Confidence 999999999887665332 25666665 55777777664 455678999999999999999999996 79999999
Q ss_pred CCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeec
Q 009410 437 SDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM 503 (535)
Q Consensus 437 k~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~ 503 (535)
|.|||||+|.++++.++.+++.+...|+||+|..+.++|..||++|++||++|+++..++.|+++++
T Consensus 384 ~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 450 (452)
T 2gwn_A 384 YYADLVLVDPSSPHTVSADNILSLCGWSPFEGFTFSHSVAYTFVNGCLAYAKGRLAESRPTVHPLFF 450 (452)
T ss_dssp SBCCEEEEETTSCEECCTTTCCSTTCCCTTTTCEESCEEEEEEETTEEEEETTEECSSCCCCCBCCB
T ss_pred CcCCEEEEcCCCCeEECHHHccccCCCCCCCCcEEeeeEEEEEECCEEEEECCeeccCCCCceeeCC
Confidence 9999999999999999999999999999999999999999999999999999999988778999874
No 15
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=100.00 E-value=2.2e-46 Score=386.24 Aligned_cols=408 Identities=24% Similarity=0.347 Sum_probs=305.3
Q ss_pred EEEEccEEEcCCC-ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHH
Q 009410 55 ILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (535)
Q Consensus 55 ~vi~n~~vi~~~~-~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~ 133 (535)
++|+|++|+++.+ ..+++|+|+||+|++|++. .+.++||++|++|+|||||+|+|+... +..+.+++....+.
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~--~~~~~~~~~~~~~~ 75 (426)
T 2z00_A 2 ILIRNVRLVDARGERGPADVLIGEGRILSLEGG----EAKQVVDGTGCFLAPGFLDLHAHLREP--GEEVKEDLFSGLLA 75 (426)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEETTEEEESBCC----CCSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHHHHHHH
T ss_pred EEEEeeEEECCCCceecceEEEECCEEEEEecC----CCceEEeCCCCEEecCEEEeccccCCC--CCCchHHHHHHHHH
Confidence 6899999999775 3688999999999999975 246899999999999999999999875 44456677778889
Q ss_pred HHhCCcEEEeccccCCCC-ChHHHHHHHHHHhccc-ccccceeeeeec-CChhhHHHHHHHHHHcCCCEEEEEeecCCCC
Q 009410 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNS-CMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKGSF 210 (535)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~ 210 (535)
++++||||++++...... .....++...+..... ..++........ ...+..+++.++. +.|...++. ++..
T Consensus 76 ~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~i~~----~~~~ 150 (426)
T 2z00_A 76 AVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHPAAALTEKQEGKTLTPAGLLR-EAGAVLLTD----DGRT 150 (426)
T ss_dssp HHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECCEECSBGGGCSSSBCCHHHHH-HHTCCEEEC----TTSC
T ss_pred HHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEEEEEeecCCChhhHHHHHHHH-HcCCEEEEC----CCcC
Confidence 999999999998643221 2223333333322221 122222221111 1112233455555 357766642 3445
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHH----HHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHh-----
Q 009410 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQ----KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEF----- 281 (535)
Q Consensus 211 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 281 (535)
..+.+.++++++.|+++|+++.+|+.+........ ......|. ..+|...+...+.++++++..
T Consensus 151 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~g~~~~~~g~-------~~~~~~~e~~~~~~~~~~a~~~~~~~ 223 (426)
T 2z00_A 151 NEDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRNGVMNDGPLADLLGL-------PGNPPEAEAARIARDLEVLRYALRRS 223 (426)
T ss_dssp CCCHHHHHHHHHHHGGGTCCEEECCCCHHHHTTCSEECSHHHHHHTC-------CEECHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhhhhhccCccchhccc-------ccCChHHHHHHHHHHHHHHhhccccc
Confidence 67899999999999999999999998765322000 00111122 224555666677788888887
Q ss_pred -cCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCC
Q 009410 282 -VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI 360 (535)
Q Consensus 282 -~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv 360 (535)
.+.++++.|++..+..+.++.+++.|+.|+++.+|++++++.+.+.. .+..++..||.|...++..+++++++|+
T Consensus 224 ~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~----~~~~~~~~~plr~~~~~~~l~~~l~~G~ 299 (426)
T 2z00_A 224 PATPRLHVQHLSTKRGLELVREAKRAGLPVTAEATPHHLTLTEEALRT----FDPLFKVAPPLRGEEDREALLEGLLDGT 299 (426)
T ss_dssp SSCCCEEETTCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGGG----CCGGGCCSSCCCCHHHHHHHHHHHHHTS
T ss_pred cCCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEEchHHhEeCHhHhhc----cCceEEEeCCCCCHHHHHHHHHHHhCCC
Confidence 78999999999887778899999999999998888887776654431 2344567889998888889999999999
Q ss_pred eEEEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCC
Q 009410 361 LQLVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGS 437 (535)
Q Consensus 361 ~~~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk 437 (535)
++++|||+.|+....+. ++|...|. +.+..+...+..+++.+++|++++++++|.|||++||++ +|+|++||
T Consensus 300 ~~~lgsD~~p~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~T~n~A~~lgl~--~G~l~~G~ 374 (426)
T 2z00_A 300 LDAIATDHAPHTLAEKE---KDLLRAPFGIPSLEVAFPLLYTELHLKRGFPLQRLVELFTDGPRRVLGLP--PLHLEEGA 374 (426)
T ss_dssp SCEECCCBCCCCTTGGG---SCTTTSCCCBCCTTTHHHHHHHHTHHHHCCCHHHHHHHHTHHHHHHHTCC--CCCSSTTS
T ss_pred cEEEecCCCCCCHHHcc---CChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHHHhCCC--cccccCCC
Confidence 99999998787665432 36766665 556666666655566667999999999999999999994 89999999
Q ss_pred CccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCe
Q 009410 438 DADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDE 490 (535)
Q Consensus 438 ~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~ 490 (535)
.|||||+|. .++.++++++.++..|+||+|..+.++|.+||++|++||++++
T Consensus 375 ~ADlvv~d~-~~~~~~~~~~~~~~~~~p~~g~~~~~~v~~t~v~G~~v~~~~~ 426 (426)
T 2z00_A 375 EASLVLLSP-KERPVDPSAFASKARYSPWAGWVLGGWPVLTLVAGRIVHEALK 426 (426)
T ss_dssp BCCEEEEEC-CCEECCGGGCSSSCCCCTTTTCEECCEEEEEEETTEEEEECCC
T ss_pred CCCEEEEeC-CcEEEcHHHccccCCCCCcCCCEEEEEEEEEEECCEEEEecCC
Confidence 999999998 7888999999999999999999999999999999999999875
No 16
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=100.00 E-value=7.5e-46 Score=386.43 Aligned_cols=414 Identities=24% Similarity=0.319 Sum_probs=278.4
Q ss_pred cccEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHH
Q 009410 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~ 129 (535)
+++++|+|++|++++. ..+++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+... +....+.+..
T Consensus 46 mm~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~iD~~g~~v~PGlID~H~H~~~~--~~~~~~~~~~ 122 (467)
T 1xrt_A 46 MLKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNIL-VPEAEIIDAKGLIVCPGFIDIHVHLRDP--GQTYKEDIES 122 (467)
T ss_dssp CCEEEEESCEEEEGGGTEEEECEEEEETTEEEEEESSCC-CSSEEEEECTTSEEEECEEEEEECCCTT--TCTTTCCHHH
T ss_pred eeeEEEEeeEEECCCCCceecceEEEECCEEEEecCCCC-CCCCcEEeCCCCEEccCEEEEeecccCC--CCCchhhHHH
Confidence 3568999999998764 368899999999999997543 3457899999999999999999999765 4445667777
Q ss_pred HHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcc-cccccceeeeeec-CChhhHHHHHHHHHHcCCCEEEEEeec
Q 009410 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAY 206 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (535)
..+.++++||||++|+...... .....++...+.... ...++........ ...+..+++.++. ..|+..++ .
T Consensus 123 ~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~-~~g~~~i~----~ 197 (467)
T 1xrt_A 123 GSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGKEIADFYSLK-EAGCVAFT----D 197 (467)
T ss_dssp HHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCSBGGGCSSSBCCHHHHH-HHTCCCBC----C
T ss_pred HHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEEEeeecCCCCcccHHHHHHHH-HcCCEEEE----c
Confidence 8888999999999998653221 222333333322221 1122222211111 1111223444444 34655543 2
Q ss_pred CCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCE
Q 009410 207 KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (535)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (535)
.+....+.+.++++++.|+++|+++.+|+++.......+ +.|......+....+...+...+.+.+.++...+.++
T Consensus 198 ~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~~~~~l----~~g~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~g~~~ 273 (467)
T 1xrt_A 198 DGSPVMDSSVMRKALELASQLGVPIMDHCEDDKLAYGVI----NEGEVSALLGLSSRAPEAEEIQIARDGILAQRTGGHV 273 (467)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHTCEEEECCCGGGGTC------------------------CHHHHHHHHHHHHHHHCCEE
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCEEEEECCCHHHHHHHH----hcCccchhcccccCChHHHHHHHHHHHHHHHHhCCCE
Confidence 344567899999999999999999999997654322111 1121111112222444455566667777778889999
Q ss_pred EEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeC
Q 009410 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (535)
Q Consensus 287 ~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgt 366 (535)
++.|++..+..+.++.+++.|+.++++.+|++++++.+.+.. .+..++..||.|......++++++++|+++++||
T Consensus 274 hi~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~----~~~~~~~~pplr~~~~~~~l~~~l~~Gv~~~lgT 349 (467)
T 1xrt_A 274 HIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLN----SGANARVNPPLRKKEDRLALIEGVKRGIIDCFAT 349 (467)
T ss_dssp EESCCCSHHHHHHHHHHHHTTCCEEEEECGGGGC--------------------------CCHHHHHHHHHHTCSCEECC
T ss_pred EEEeCCCHHHHHHHHHHHhcCCcEEEeccHHHHhcCHhHhhc----cCceEEEcCCCCCHHHHHHHHHHHhCCceEEEee
Confidence 999999887668888888999888888888777666554321 1244567788888888899999999999999999
Q ss_pred CCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEE
Q 009410 367 DHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIII 443 (535)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvv 443 (535)
|+.+.+...+. .|...|. |+++.+...++ +++.+.+|++++|+++|.|||++||++ +|+|++||.|||||
T Consensus 350 D~~~~~~~~~~----~~~~~~~g~~g~e~~l~~~l~-~~~~g~ls~~~al~~aT~n~A~~lgl~--~G~I~~G~~ADlvv 422 (467)
T 1xrt_A 350 DHAPHQTFEKE----LVEFAMPGIIGLQTALPSALE-LYRKGIISLKKLIEMFTINPARIIGVD--LGTLKLGSPADITI 422 (467)
T ss_dssp CBCCCCC---------------CCCCGGGHHHHHHH-HHHTTSSCHHHHHHHHTHHHHHHHTCS--CSCCCTTSBCCEEE
T ss_pred CCCCCChhHhc----ccccCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHHhccCHHHHhCCC--cccccCCCCCCEEE
Confidence 98876554321 3544443 55666666665 555555999999999999999999994 89999999999999
Q ss_pred EcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC
Q 009410 444 FNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 444 ld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~ 488 (535)
+|.++++.++++++.+...++||++..+.++|..||++|++||+|
T Consensus 423 ld~~~~~~i~~~~~~~~~~~~p~~g~~~~~~V~~viv~G~~v~~~ 467 (467)
T 1xrt_A 423 FDPNKEWILNEETNLSKSRNTPLWGKVLKGKVIYTIKDGKMVYKD 467 (467)
T ss_dssp EEEEEEEECSTTTCCSSCCCCTTTTCEEEEEEEEEEETTEEEEEC
T ss_pred EeCCCCEEEChHHccCcCCCCCccCCEEeEEEEEEEECCEEEecC
Confidence 999998999988899888999999998889999999999999985
No 17
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=100.00 E-value=3.6e-40 Score=344.04 Aligned_cols=380 Identities=19% Similarity=0.191 Sum_probs=254.4
Q ss_pred cCcccEEEEccEEEcCCC----------ceeeeEEEeCCEEEEeeCCCC-CCCCceEEecCCCEEeeccccccccccccc
Q 009410 50 QSSSKILIKGGTVVNAHH----------QQIADVYVEDGIVVAVQPNIN-VGDDVKVLDATGKFVMPGGIDPHTHLAMEF 118 (535)
Q Consensus 50 ~~~~~~vi~n~~vi~~~~----------~~~~~I~I~~G~I~~Vg~~~~-~~~~~~vID~~G~~vlPGlID~H~H~~~~~ 118 (535)
.++++++|+|++|+++++ .++++|+|+||+|++|++... .+.+.++||++|++|+|||||+|+|+....
T Consensus 20 ~~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~ 99 (468)
T 3lnp_A 20 KAHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSCQIPATETLDLGQQVLMPGWVNAHGHAAMSL 99 (468)
T ss_dssp -CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTTCCCCEEEEEECCSEEEEECEEECSCCGGGGG
T ss_pred CccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCccccCCCCeEEeCCCcEEEeCeechhhChhhhh
Confidence 346789999999998653 258999999999999998654 345689999999999999999999996542
Q ss_pred C-CC---------------------CchhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccc
Q 009410 119 M-GS---------------------ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYG 172 (535)
Q Consensus 119 ~-g~---------------------~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (535)
. |. .+++++. .....++++||||+.|+... .....+...+.+.+..+..+
T Consensus 100 ~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~g~r~~~~~~ 175 (468)
T 3lnp_A 100 FRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMYFY----PQQSGEAALAAGIRAVCFAP 175 (468)
T ss_dssp GTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECCSC----HHHHHHHHHHHTCEEEEEEE
T ss_pred hccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHcCCeEEEecc
Confidence 1 11 2223322 23445689999999998432 23344444444444333332
Q ss_pred eeeeee---cCChhhHHHHHHHHHH-cCCC-----EEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHH
Q 009410 173 FHMAIT---KWDEVVSDEMEVMVKE-KGIN-----SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVF 242 (535)
Q Consensus 173 ~~~~~~---~~~~~~~~~~~~~~~~-~g~~-----~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~ 242 (535)
...... ....+..+...++.+. .+.. .+++...+++....+++.++++++.|+++|+++++|+.+. ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~ 255 (468)
T 3lnp_A 176 VLDFPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLDMPVQIHLHETDFEVS 255 (468)
T ss_dssp ECSSCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCSHHHHH
T ss_pred ccCCCcccccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHH
Confidence 221111 1112333444444322 2443 6777777777788899999999999999999999999654 3333
Q ss_pred HHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeC
Q 009410 243 EGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLD 322 (535)
Q Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~ 322 (535)
..++ ..|... +. .+......+.++.+.|+...+. +.++.+++.|+.++.||...
T Consensus 256 ~~~~---~~g~~~----------------i~-~~~~~g~l~~~~~~~H~~~~~~-~~~~~l~~~g~~v~~~p~s~----- 309 (468)
T 3lnp_A 256 ESLE---TFNKRP----------------TQ-RLADIGFLNERVSCVHMTQVDD-GDIKILQKTGASIIHCPESN----- 309 (468)
T ss_dssp HHHH---HHSSCH----------------HH-HHHHTTCCSTTEEEEECCSCCH-HHHHHHHHHCCEEEECHHHH-----
T ss_pred HHHH---HhCCCH----------------HH-HHHHcCCCCCCeEEEeccCCCH-HHHHHHHhcCCEEEEChhhh-----
Confidence 2222 223211 11 1122233456788999998876 88999999999998887642
Q ss_pred cccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHH
Q 009410 323 DSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMV 402 (535)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~ 402 (535)
+..+... .+++.++++|+++++|||+.+.+...+ +|. +..+...+.+..
T Consensus 310 --------~~~~~~~------------~~~~~~~~~Gv~v~lgtD~~~~~~~~~-----~~~------~~~~~~~~~~~~ 358 (468)
T 3lnp_A 310 --------LKLASGF------------CPIAKLSAANIPLAIGTDGAASNNDLD-----MFS------ETKTAALLAKGV 358 (468)
T ss_dssp --------HHTTCCC------------CCHHHHHHTTCCEEECCCCTTSSCCCC-----HHH------HHHHHHHHHHHH
T ss_pred --------hhcCCCC------------CCHHHHHHCCCeEEEECCCCcCCCCCC-----HHH------HHHHHHHHhhhc
Confidence 1111111 128889999999999999765422211 111 223333333332
Q ss_pred h--cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEE
Q 009410 403 E--SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIA 480 (535)
Q Consensus 403 ~--~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~ 480 (535)
. ..++|++++|+++|.|||+++|+++++|+|++||.|||||+|.++++..+..+..+.. .+.. ...+|..||+
T Consensus 359 ~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~---~~~~--~~~~v~~v~v 433 (468)
T 3lnp_A 359 SQDASAIPAIEALTMATLGGARALGIDDITGSLKPGKAADIQAIDLNTLSSQPVFDPVSHM---VYCT--KSTQVSHVWV 433 (468)
T ss_dssp HTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSCHHHHH---HHSC--CGGGEEEEEE
T ss_pred cCCCCcCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCccCCccCHHHHh---hccC--CCCCceEEEE
Confidence 2 5679999999999999999999988899999999999999999877655432221111 1111 1358999999
Q ss_pred CCEEEEECCeecccC
Q 009410 481 GGRVVWENDELNVVP 495 (535)
Q Consensus 481 ~Gr~V~~~~~~~~~~ 495 (535)
+|++||++|+++..+
T Consensus 434 ~G~~v~~~g~~~~~d 448 (468)
T 3lnp_A 434 NGRCLLKNGELTTLN 448 (468)
T ss_dssp TTEEEEETTEESSSC
T ss_pred CCEEEEECCeECCCC
Confidence 999999999999876
No 18
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=100.00 E-value=1.2e-40 Score=345.56 Aligned_cols=380 Identities=19% Similarity=0.240 Sum_probs=255.9
Q ss_pred cCcccEEEEccEEEcCCC----ceeeeEEEeCCEEEEeeCCCCC--CCCceEEecCCCEEeecccccccccccccC-CC-
Q 009410 50 QSSSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS- 121 (535)
Q Consensus 50 ~~~~~~vi~n~~vi~~~~----~~~~~I~I~~G~I~~Vg~~~~~--~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~- 121 (535)
.|+++++|+|++|+++++ .++++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..... |.
T Consensus 3 ~~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~ 82 (447)
T 4f0r_A 3 QSRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGLEADERLELPDHVLMPGLINLHGHSAMSLLRGLA 82 (447)
T ss_dssp --CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHTTSCEEEEEEEEEEEEEECEEEEEECGGGGGGTTSS
T ss_pred CCcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccccCCCCeEEeCCCcEEeeCccchhhChhhHhhccCC
Confidence 357889999999998764 3689999999999999985432 246889999999999999999999965421 11
Q ss_pred --------------------CchhhhHH----HHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee
Q 009410 122 --------------------ETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI 177 (535)
Q Consensus 122 --------------------~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (535)
.++++... ....++++||||++|+... .....+...+.+.+..+..+.....
T Consensus 83 ~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~g~r~~~~~~~~~~~ 158 (447)
T 4f0r_A 83 DDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYFY----NAAVARAGLASGMRTFVGCSILEFP 158 (447)
T ss_dssp CSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECBSC----HHHHHHHHHHHTCEEEEEEEECSSC
T ss_pred CCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHcCCeEEEEchhcCCC
Confidence 22232322 3445788999999998432 2344444445554433333222111
Q ss_pred e---cCChhhHHHHHHHHHH-cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcC
Q 009410 178 T---KWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELG 252 (535)
Q Consensus 178 ~---~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~g 252 (535)
. ...++..+...++.+. .+.+.+++...+++....+.+.++++++.|+++|+++.+|+.+. ......++ ..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~---~~g 235 (447)
T 4f0r_A 159 TNYASNADDYIAKGMAERSQFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVK---EHG 235 (447)
T ss_dssp CSSCSSHHHHHHHHHHHHHTTTTCTTEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH---HHS
T ss_pred cccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH---HcC
Confidence 1 1122344444444422 36677888887777778899999999999999999999999655 33333222 223
Q ss_pred CCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcc
Q 009410 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332 (535)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 332 (535)
... +.. +.-....+.+..+.|+...+. ++++.+++.|+.+..||... +.
T Consensus 236 ~~~----------------i~~-~~~~g~~~~~~~~~H~~~~~~-~~~~~~~~~g~~~~~~p~~~-------------~~ 284 (447)
T 4f0r_A 236 QRP----------------LAR-LQRLGLLSPRLVAAHMVHLND-AEVELAARHGLSTAHNPASN-------------MK 284 (447)
T ss_dssp SCH----------------HHH-HHHHTCCSTTEEEEECCSCCH-HHHHHHHHHTCEEEECHHHH-------------HH
T ss_pred CCH----------------HHH-HHHcCCCCCCcEEEeccCCCH-HHHHHHHHcCCEEEECchhh-------------hh
Confidence 211 111 122233456788999998877 88999999999998887641 11
Q ss_pred ccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh--cCCCCHH
Q 009410 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE--SGQISVT 410 (535)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~--~~~ls~~ 410 (535)
.+... .++++++++|+++++|||+.+.+...+ +|. +..+...+++... ..++|++
T Consensus 285 ~~~~~------------~~~~~~~~~Gv~v~lgTD~~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~l~~~ 341 (447)
T 4f0r_A 285 LASGI------------SPVSKLMDAGVAVGIGTDGAASNNKLD-----MLA------ETRLAALLAKVGTLDPTSVPAA 341 (447)
T ss_dssp TTCCC------------CCHHHHHHTTCEEEECCCCGGGTCCCC-----HHH------HHHHHHHHHHHHHTCTTSSCHH
T ss_pred cCCCC------------CcHHHHHHCCCcEEEeCCCCcCCCCCC-----HHH------HHHHHHHHhhhhccCCCCCCHH
Confidence 11111 128899999999999999765422111 111 2333333333332 4679999
Q ss_pred HHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCe
Q 009410 411 DYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDE 490 (535)
Q Consensus 411 eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~ 490 (535)
++++++|.|||+++|+++++|+|++||.|||||+|.++++..+..++.+. ..+... ..+|..||++|++||++|+
T Consensus 342 ~al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~---~~~~~~--~~~v~~v~v~G~~v~~~g~ 416 (447)
T 4f0r_A 342 AAIRMATLNGARALGIADKVGSVKVGKQADLIALDLAQLETAPAFDPISH---VVYAAG--REQVSHVWVKGRALMRERK 416 (447)
T ss_dssp HHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSCHHHH---HHHTCC--GGGEEEEEETTEEEEETTE
T ss_pred HHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCCcCCCcChHHH---heecCC--CCCceEEEECCEEEEECCe
Confidence 99999999999999998889999999999999999987765543222111 111111 3589999999999999999
Q ss_pred ecccC
Q 009410 491 LNVVP 495 (535)
Q Consensus 491 ~~~~~ 495 (535)
++..+
T Consensus 417 ~~~~d 421 (447)
T 4f0r_A 417 LTTLD 421 (447)
T ss_dssp ESSSC
T ss_pred ECcCC
Confidence 99876
No 19
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=100.00 E-value=2.4e-40 Score=338.52 Aligned_cols=352 Identities=15% Similarity=0.146 Sum_probs=235.6
Q ss_pred ccEEEEccEEEcCCCc---eeeeEEEeCCEEEEeeCCC-CCCCCceEEecCCCEEeecccccccccccccCCCC------
Q 009410 53 SKILIKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNI-NVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE------ 122 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~---~~~~I~I~~G~I~~Vg~~~-~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~------ 122 (535)
.+++|+|++|+|+++. ++++|+|+||||++|++.. ..+.+.++||++|++|+|||||+|+|+........
T Consensus 2 ~~~~i~~~~i~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~ 81 (403)
T 3gnh_A 2 EIKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAVPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLEY 81 (403)
T ss_dssp CEEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTSCCCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCSGGGGGS
T ss_pred ccEEEEccEEEECCCCcccCCCEEEEECCEEEEEeCCCCCCCCCCeEEECCCCEEcCCeEeeeEccccCcccchhhhhcC
Confidence 3589999999998753 6789999999999999865 34567899999999999999999999986621111
Q ss_pred chhhh----HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHh----cccccccce------ee-------------
Q 009410 123 TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA----KNSCMDYGF------HM------------- 175 (535)
Q Consensus 123 ~~~~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------~~------------- 175 (535)
+++.. ...++.++++||||++|++.... ....++...+.+ ++....... +.
T Consensus 82 ~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~g~~~gpr~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 159 (403)
T 3gnh_A 82 SDRFWSVVQTANAKKTLEAGFTTVRNVGAADY--DDVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKN 159 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHTTEEEEEECCCSTT--HHHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCC
T ss_pred CHHHHHHHHHHHHHHHHhCCeeEEEeCCCCcc--ccHHHHHHHHCCCCCCCeEEecCcccccCCCCcccccCchhhcccC
Confidence 11111 12346789999999999965422 222333333322 232221111 10
Q ss_pred -eeecCChhhHHHHHHHHHHcCCCEEEEEeec--------CCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHH
Q 009410 176 -AITKWDEVVSDEMEVMVKEKGINSFKFFMAY--------KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQK 246 (535)
Q Consensus 176 -~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~--------~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~ 246 (535)
......++..+.++++. ..|.+.+|++.+. .+...++++.++++++.|+++|+++.+|+.+...+...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~- 237 (403)
T 3gnh_A 160 PFNSDSPDEARKAVRTLK-KYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIREAV- 237 (403)
T ss_dssp TTCCCSHHHHHHHHHHHH-HTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHH-
T ss_pred CcccCCHHHHHHHHHHHH-HcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-
Confidence 01122245566677766 6799999998752 345678999999999999999999999997765432222
Q ss_pred HHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcc--
Q 009410 247 RMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDS-- 324 (535)
Q Consensus 247 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-- 324 (535)
+.| .. .+.|+...+. +.++++++.|+.+++++..........
T Consensus 238 ---~~g-------------------------------~~-~i~H~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 281 (403)
T 3gnh_A 238 ---RAG-------------------------------VD-TIEHASLVDD-EGIKLAVQKGAYFSMDIYNTDYTQAEGKK 281 (403)
T ss_dssp ---HTT-------------------------------CS-EEEECTTCCH-HHHHHHHHHTCEEECCCSTHHHHHHHHHH
T ss_pred ---HhC-------------------------------CC-EEecCCcCCH-HHHHHHHHCCCEEEeeechhhhhhhhccc
Confidence 222 22 5789987776 889999999998887664321110000
Q ss_pred -cccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh
Q 009410 325 -WLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE 403 (535)
Q Consensus 325 -~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~ 403 (535)
.+...++...... .......++.++++|+++++|||+...+.... ...+..+ .
T Consensus 282 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~Gv~v~~gTD~~~~~~~~~--------------~~e~~~~----~- 335 (403)
T 3gnh_A 282 NGVLEDNLRKDRDI-------GELQRENFRKALKAGVKMVYGTDAGIYPHGDN--------------AKQFAVM----V- 335 (403)
T ss_dssp HTCCHHHHHHHHHH-------HHHHHHHHHHHHHHTCEEECCCCBTTBCTTCG--------------GGHHHHH----H-
T ss_pred cCCCHHHHHHHHHH-------HHHHHHHHHHHHHCCCeEEEecCCCCCCCCch--------------HHHHHHH----H-
Confidence 0000000000000 00112357889999999999999743322110 0122222 2
Q ss_pred cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCE
Q 009410 404 SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGR 483 (535)
Q Consensus 404 ~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr 483 (535)
+.++|+.|+|+++|.|||+++|+++++|+|++||.|||||+|.|+...++ ...+|+.||++|+
T Consensus 336 ~~gl~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~~~~~-----------------~~~~v~~v~~~G~ 398 (403)
T 3gnh_A 336 RYGATPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGDPLADVT-----------------TLEKPVFVMKGGA 398 (403)
T ss_dssp HTTCCHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSCTTTCGG-----------------GGGSCSEEEETTE
T ss_pred HcCCCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChhhCHH-----------------HhcCcCEEEECCE
Confidence 34799999999999999999999888999999999999999988654332 1357999999999
Q ss_pred EEEE
Q 009410 484 VVWE 487 (535)
Q Consensus 484 ~V~~ 487 (535)
+|+.
T Consensus 399 ~v~~ 402 (403)
T 3gnh_A 399 VVKA 402 (403)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9974
No 20
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=100.00 E-value=6e-40 Score=343.34 Aligned_cols=379 Identities=17% Similarity=0.246 Sum_probs=252.3
Q ss_pred cccEEEEccEEE-cCCC----ceeeeEEEeCCEEEEeeCCCCCC-CCceEEecCCCEEeecccccccccccccC-CC---
Q 009410 52 SSKILIKGGTVV-NAHH----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--- 121 (535)
Q Consensus 52 ~~~~vi~n~~vi-~~~~----~~~~~I~I~~G~I~~Vg~~~~~~-~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~--- 121 (535)
+.+++|+|++++ ++++ .++++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+..... +.
T Consensus 28 m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~rg~~~~ 107 (479)
T 3h4u_A 28 PKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAA 107 (479)
T ss_dssp -CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCSCCSEEEECTTEEEEECEEECCCCGGGGGSCSCTTT
T ss_pred hhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccCCCCCeEEeCCCCEEecceeecccccchhhhcccccc
Confidence 568999999966 4332 36899999999999999865443 56899999999999999999999987622 11
Q ss_pred ------------------CchhhhH----HHHHHHHhCCcEEEeccccCCCC--ChHHHHHHHHHHhcccccccceeee-
Q 009410 122 ------------------ETIDDFF----SGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHMA- 176 (535)
Q Consensus 122 ------------------~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~- 176 (535)
.++++++ .....++++||||++|++..... .....++.....+.+.....+....
T Consensus 108 ~~~~l~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~ 187 (479)
T 3h4u_A 108 QNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMSVG 187 (479)
T ss_dssp TTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEEEEECC--
T ss_pred CCCCHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECccccCCcchHHHHHHHHHHcCCEEEEEeeecccc
Confidence 1223322 23455688999999998543222 3555666666666554333222111
Q ss_pred ----------eecCChhhHHHHHHHHHHc-C---CCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChh-hH
Q 009410 177 ----------ITKWDEVVSDEMEVMVKEK-G---INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AV 241 (535)
Q Consensus 177 ----------~~~~~~~~~~~~~~~~~~~-g---~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~-~~ 241 (535)
......+..++..++.+.. + ...+++...++....++++.++++++.|+++|+++++|+.+.. ..
T Consensus 188 ~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~ 267 (479)
T 3h4u_A 188 QRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDI 267 (479)
T ss_dssp --------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTSSCHHHHHHHHHHHHHHTCEEEEEESCSHHHH
T ss_pred cccccCCcccccccHHHHHHHHHHHHHHhhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCHHHH
Confidence 0011233444555554322 2 3456777777777788999999999999999999999995543 33
Q ss_pred HHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEee
Q 009410 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVL 321 (535)
Q Consensus 242 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 321 (535)
...++. .|.. ..+.+......+.++.+.|+...+. ++++.+++.|+.++.||...
T Consensus 268 ~~~~~~---~g~~-----------------~~~~~~~~g~~~~~~~i~H~~~~~~-~~~~~l~~~g~~v~~~p~s~---- 322 (479)
T 3h4u_A 268 AYSREK---FGMT-----------------PAEYAEDLGWVGHDVWHAHCVQLDD-AGIGLFARTGTGVAHCPCSN---- 322 (479)
T ss_dssp HC----------C-----------------HHHHHHHTTCCSTTEEEEECTTCCH-HHHHHHHHHTCEEEECHHHH----
T ss_pred HHHHHH---cCCC-----------------HHHHHHHcCCCCCCeEEEEecCCCH-HHHHHHHHcCCeEEEChhHh----
Confidence 222211 1110 0111222233456788999998887 88999999999999888642
Q ss_pred CcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHH
Q 009410 322 DDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTM 401 (535)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~ 401 (535)
+..+... .++++++++|+++++|||+.+.+...+ +|. ++.......+.
T Consensus 323 ---------~~l~~~~------------~~~~~~~~~Gv~v~lgtD~~~~~~~~~-----~~~------~~~~~~~~~~~ 370 (479)
T 3h4u_A 323 ---------MRLASGI------------APVKKMRLAGVPVGLGVDGSASNDGAQ-----MVA------EVRQALLLQRV 370 (479)
T ss_dssp ---------HHTTCCC------------CCHHHHHHTTCCEEECCCCTTSSCCCC-----HHH------HHHHHHHHHHH
T ss_pred ---------hhcCCCC------------CCHHHHHHCCCeEEEeCCCCccCCCcC-----HHH------HHHHHHHHhcc
Confidence 1111111 128899999999999999765432211 111 22222222222
Q ss_pred H-hcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeE--eeEEEEE
Q 009410 402 V-ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV--KGKVEVT 478 (535)
Q Consensus 402 ~-~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~--~~~v~~v 478 (535)
. ....+|++++|+++|.|||+++|+++ +|+|++||.|||||+|.+++...+. .+.|+++..+ ..+|+.|
T Consensus 371 ~~~~~~l~~~~al~~~T~~~A~~lg~~~-~G~l~~G~~ADlvv~d~~~~~~~~~-------~~~~~~~~~~~~~~~v~~v 442 (479)
T 3h4u_A 371 GFGPDAMTAREALEIATLGGAKVLNRDD-IGALKPGMAADFAAFDLRQPLFAGA-------LHDPVAALVFCAPSQTAYT 442 (479)
T ss_dssp HHCTTSCCHHHHHHHTTHHHHHHHTCSS-SSSCSTTSBCCEEEEETTSGGGTTC-------TTSHHHHHHHSSCCCCSEE
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCcCCEEEEeCCCCccCCc-------ccCHHHHHHccCCCCcCEE
Confidence 2 13349999999999999999999976 9999999999999999887654430 2345444332 4689999
Q ss_pred EECCEEEEECCeecccC
Q 009410 479 IAGGRVVWENDELNVVP 495 (535)
Q Consensus 479 ~~~Gr~V~~~~~~~~~~ 495 (535)
|++|++||++|+++..+
T Consensus 443 ~v~G~~v~~~g~~~~~d 459 (479)
T 3h4u_A 443 VVNGKVVVREGRLATLD 459 (479)
T ss_dssp EETTEEEEETTEECSSC
T ss_pred EECCEEEEECCEECCCC
Confidence 99999999999999876
No 21
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=100.00 E-value=2.5e-40 Score=340.71 Aligned_cols=361 Identities=18% Similarity=0.150 Sum_probs=235.1
Q ss_pred cccEEEEccEEEcCCCc---eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCC-----CCc
Q 009410 52 SSKILIKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-----SET 123 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~---~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g-----~~~ 123 (535)
+.+++|+|++|+|+++. ++++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+...... ...
T Consensus 3 ~~~~~i~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~ 82 (423)
T 3feq_A 3 LTITVLQGGNVLDLERGVLLEHHHVVIDGERIVEVTDRPVDLPNAQAIDVRGKTVMPGFIDCHVHVLASNANLGVNATQP 82 (423)
T ss_dssp -CEEEEEEEEEEETTTTEEEEEEEEEEETTEEEEEECSCCCCSSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHHHSC
T ss_pred ceEEEEEccEEEeCCCCcccCCceEEEECCEEEEecCCCCCCCCCeEEeCCCCEECCCeeeeEeeecccCCChhhhhcCC
Confidence 45799999999998753 4789999999999999865556678999999999999999999999876210 011
Q ss_pred hhhh----HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccce--------------------------
Q 009410 124 IDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGF-------------------------- 173 (535)
Q Consensus 124 ~~~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 173 (535)
++.. ...+..++++||||++|+..... ...+.++.....+++.+.....
T Consensus 83 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~~~~~~~~g~r~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 161 (423)
T 3feq_A 83 NILAAIRSLPILDAMLSRGFTSVRDAGGADW-SLMQAVETGLVSGPRIFPSGKALSQTGGHGDFRPRGDLLEPCSCCFRT 161 (423)
T ss_dssp HHHHHHTHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCSCEEECCCSEEECTTSTTCCCCC---CCCCCSSCCT
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCcccccCCCCccccccccccccccccccc
Confidence 1111 23455679999999999864322 2333333222222332111110
Q ss_pred --eeeeecCChhhHHHHHHHHHHcCCCEEEEEee--------cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHH
Q 009410 174 --HMAITKWDEVVSDEMEVMVKEKGINSFKFFMA--------YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFE 243 (535)
Q Consensus 174 --~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~--------~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~ 243 (535)
+.......++..+.++++. ..|++.+|++.+ +.+...++++.++++++.|+++|+++.+|+.+...+..
T Consensus 162 ~~~~~~~~~~~~~~~~v~~~~-~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~ 240 (423)
T 3feq_A 162 GAIARVVDGVEGVRLAVREEI-QKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYTGRAIAR 240 (423)
T ss_dssp TCSEEECCSHHHHHHHHHHHH-HTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEEHHHHHH
T ss_pred cccceecCCHHHHHHHHHHHH-HcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 0111122344556666666 689999999876 23445789999999999999999999999986543322
Q ss_pred HHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCc
Q 009410 244 GQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (535)
Q Consensus 244 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~ 323 (535)
.+ +.| .. .+.|+...+. +.++.+++.|+.++++.......+..
T Consensus 241 ~l----~~g-------------------------------~~-~i~H~~~~~~-~~~~~l~~~gv~~~pt~~~~~~~~~~ 283 (423)
T 3feq_A 241 AV----RCG-------------------------------VR-TIEHGNLVDE-AAAKLMHEHGAFVVPTLVTYDALAKH 283 (423)
T ss_dssp HH----HHT-------------------------------CC-EEEEEEECCH-HHHHHHHHHTCEEECCTHHHHHHHHH
T ss_pred HH----HcC-------------------------------CC-EEeccCcCCH-HHHHHHHHCCCccccchHHHHHHHhc
Confidence 22 122 22 4678776665 88899999998886553322111110
Q ss_pred ccccCcCccccceeEEcCCCCCc------ccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHH
Q 009410 324 SWLWHSDFVTAAKYVMSPPIRAS------GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLV 397 (535)
Q Consensus 324 ~~~~~~~~~~~~~~~~~p~~r~~------~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~ 397 (535)
... ....|..... .....++.++++|+++++|||+....... . ...+.
T Consensus 284 ~~~----------~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gTD~~~~~~~~-~-------------~~e~~-- 337 (423)
T 3feq_A 284 GAE----------FGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGSDLLGEMHAF-Q-------------SGEFR-- 337 (423)
T ss_dssp TGG----------GTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCCCCCGGGGGG-T-------------THHHH--
T ss_pred ccc----------cCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCcc-h-------------HHHHH--
Confidence 000 0001111111 12356888999999999999975321111 0 11221
Q ss_pred HHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEE
Q 009410 398 WDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEV 477 (535)
Q Consensus 398 ~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~ 477 (535)
+..+. +|++|+|+++|.|||+++|+++++|+|++||.|||||+|.|+...+.. +.+. ..+|+.
T Consensus 338 ---~~~~~-ls~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~~~~~~-----------~~~~--~~~v~~ 400 (423)
T 3feq_A 338 ---IRAEV-LGNLEALRSATTVAAEIVNMQGQLGVIAVGAIADLVVLDGNPLEDIGV-----------VADE--GARVEY 400 (423)
T ss_dssp ---HHHTT-SCHHHHHHTTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSCTTTCGGG-----------TSSS--TTSEEE
T ss_pred ---HHHhh-CCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChhhCHHH-----------Hhcc--CCCceE
Confidence 12244 999999999999999999998889999999999999999886543321 1000 147999
Q ss_pred EEECCEEEEECCeeccc
Q 009410 478 TIAGGRVVWENDELNVV 494 (535)
Q Consensus 478 v~~~Gr~V~~~~~~~~~ 494 (535)
||++|++|+++++..+.
T Consensus 401 v~~~G~~v~~~~~~~~~ 417 (423)
T 3feq_A 401 VLQRGTLVKRQAAGREG 417 (423)
T ss_dssp EEETTEEEEEC------
T ss_pred EEECCEEEeCCcccccc
Confidence 99999999999887764
No 22
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=100.00 E-value=1.9e-40 Score=341.83 Aligned_cols=366 Identities=15% Similarity=0.172 Sum_probs=238.3
Q ss_pred ccEEEEccEEEcCCCc---eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCC-----CCch
Q 009410 53 SKILIKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-----SETI 124 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~---~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g-----~~~~ 124 (535)
.+++|+|++|+|+++. ++++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+...... ..+.
T Consensus 4 ~~~~i~n~~i~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~~iD~~g~~v~PGliD~H~H~~~~~~~~~~~~~~~~ 83 (426)
T 2r8c_A 4 TTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRVATLPN 83 (426)
T ss_dssp CEEEEEEEEECCTTSSSCEEEEEEEEESSBEEEEESSCCCCSSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHHHSCH
T ss_pred ccEEEEeeEEEeCCCCcccCCceEEEECCEEEEEcCCCCCCCCCeEEECCCCEEcCCeEeeeeccccccCCchhhccCCH
Confidence 5699999999998642 5789999999999999865556678999999999999999999999876210 0111
Q ss_pred hhh----HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccce---------------------------
Q 009410 125 DDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGF--------------------------- 173 (535)
Q Consensus 125 ~~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 173 (535)
+.. ...+..++++||||++|+..... ...+.++.....+++.......
T Consensus 84 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~i~~~~~~gpri~~~g~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 162 (426)
T 2r8c_A 84 VLVTLRAVPIMRAMLRRGFTTVRDAGGAGY-PFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCCV 162 (426)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBCCCSCSSSSBC
T ss_pred HHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCCcccCCCCCcccccccccccccccccccc
Confidence 111 13345679999999999965422 2333333222222232111110
Q ss_pred ----eeeeecCChhhHHHHHHHHHHcCCCEEEEEeec--------CCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhH
Q 009410 174 ----HMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY--------KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (535)
Q Consensus 174 ----~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~--------~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~ 241 (535)
+.......++..+.+++.. +.|++.+|++.+. ++...++++.++++++.|+++|+++.+|+.+...+
T Consensus 163 ~~~~~~~~~~~~~~~~~~v~~~~-~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i 241 (426)
T 2r8c_A 163 RVGALGRVADGVDEVRRAVREEL-QMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPAAI 241 (426)
T ss_dssp CTTCCEEECCSHHHHHHHHHHHH-HHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHHHH
T ss_pred cccccccccCCHHHHHHHHHHHH-HcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeCChHHH
Confidence 0111222345566666666 6799999998762 34457899999999999999999999999866433
Q ss_pred HHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEee
Q 009410 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVL 321 (535)
Q Consensus 242 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 321 (535)
...+ +. +.. .+.|+...+. +.++.+++.|+.++++.......+
T Consensus 242 ~~al----~~-------------------------------G~~-~i~H~~~~~~-~~~~~~~~~gv~~~pt~~~~~~~~ 284 (426)
T 2r8c_A 242 ARAV----RC-------------------------------GVR-TIEHGNLIDD-ETARLVAEHGAYVVPTLVTYDALA 284 (426)
T ss_dssp HHHH----HT-------------------------------TCS-EEEECTTCCH-HHHHHHHHTTCEEECCTHHHHHHH
T ss_pred HHHH----Hc-------------------------------CCC-EEecCCcCCH-HHHHHHHHcCCeEeechHHHHHHh
Confidence 2222 22 222 4789888776 889999999988865533221111
Q ss_pred CcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHH
Q 009410 322 DDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTM 401 (535)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~ 401 (535)
...... .+..... .............++.++++|+++++|||+.+...... ...+. +
T Consensus 285 ~~~~~~--~~~p~~~--~~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~~~~~~~--------------~~e~~-----~ 341 (426)
T 2r8c_A 285 SEGEKY--GLPPESI--AKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQRLQ--------------SDEFR-----I 341 (426)
T ss_dssp HHTTTT--TCCHHHH--TTSTTTGGGHHHHHHHHHHTTCEECCCCCCCGGGGGGT--------------THHHH-----H
T ss_pred hhcccc--CCCHHHH--HHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCcch--------------HHHHH-----H
Confidence 100000 0000000 00000011234668899999999999999753221110 01111 1
Q ss_pred HhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEEC
Q 009410 402 VESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAG 481 (535)
Q Consensus 402 ~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~ 481 (535)
..+. +|++|+|+++|.|||+++|+++++|+|++||.|||||+|.|+...+.. +.+. ..+|+.||++
T Consensus 342 ~~~~-l~~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~p~~~~~~-----------~~~~--~~~v~~v~~~ 407 (426)
T 2r8c_A 342 LAEV-LSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGNPLKSVDC-----------LLGQ--GEHIPLVMKD 407 (426)
T ss_dssp HTTT-SCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCGGG-----------TCSS--STTCCEEEET
T ss_pred HHhc-CCHHHHHHHHHHHHHHHhCCCCCCccCCCCCcCCEEEECCChHhCHHH-----------HhCc--CCcceEEEEC
Confidence 2244 999999999999999999998889999999999999999886543321 0000 1479999999
Q ss_pred CEEEEECCeeccc
Q 009410 482 GRVVWENDELNVV 494 (535)
Q Consensus 482 Gr~V~~~~~~~~~ 494 (535)
|++|+++++..+.
T Consensus 408 G~~v~~~~~~~~~ 420 (426)
T 2r8c_A 408 GRLFVNELEGHEG 420 (426)
T ss_dssp TEEEEETTC----
T ss_pred CEEEecccccccc
Confidence 9999999887664
No 23
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=7.2e-40 Score=340.12 Aligned_cols=377 Identities=16% Similarity=0.186 Sum_probs=253.6
Q ss_pred cCcccEEEEccEEEcCCC----ceeeeEEEeCCEEEEeeCCCC--CCCCceEEecCCCEEeecccccccccccccC-C--
Q 009410 50 QSSSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNIN--VGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G-- 120 (535)
Q Consensus 50 ~~~~~~vi~n~~vi~~~~----~~~~~I~I~~G~I~~Vg~~~~--~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g-- 120 (535)
.++++++|+|++|+++++ .++++|+|+||+|++|++... .+.+.++||++|++|+|||||+|+|+..... |
T Consensus 5 ~~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~ 84 (451)
T 4dyk_A 5 RNPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMRHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGLA 84 (451)
T ss_dssp -CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHHTTTCEEEEEEEEEEEEEECEEECCCCGGGGGGTTSS
T ss_pred cchhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCccccccCCCCeEEeCCCCEEeecccchhhChhhHHhccCC
Confidence 346789999999999653 268999999999999998542 2346899999999999999999999965521 1
Q ss_pred -------------------CCchhhhHHH----HHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee
Q 009410 121 -------------------SETIDDFFSG----QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI 177 (535)
Q Consensus 121 -------------------~~~~~~~~~~----~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (535)
..++++++.. ...++++||||++|+... .....+...+.+.+..+........
T Consensus 85 ~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~a~~~~g~r~~~~~~~~~~~ 160 (451)
T 4dyk_A 85 DDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMYFY----PQAICGVVHDSGVRAQVAIPVLDFP 160 (451)
T ss_dssp CSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECSC----HHHHHHHHHHHTCEEEEEEEECSSC
T ss_pred CCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHcCCeEEEEchhhCCC
Confidence 1223333332 344569999999998432 2334444444444433332222111
Q ss_pred e---cCChhhHHHHHHHHHH-cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcC
Q 009410 178 T---KWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELG 252 (535)
Q Consensus 178 ~---~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~g 252 (535)
. ....+..+...++.+. .+...+++.+.++..+..+++.++++++.|+++|+++++|+.+. ......++ ..|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~---~~g 237 (451)
T 4dyk_A 161 IPGARDSAEAIRQGMALFDDLKHHPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAME---RNG 237 (451)
T ss_dssp BTTBSSHHHHHHHHHHHHHHTTTCSSEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH---HHS
T ss_pred CccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HhC
Confidence 1 1122334444444422 36677888778887788899999999999999999999999554 23332222 222
Q ss_pred CCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcc
Q 009410 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332 (535)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 332 (535)
... +. .+......+.++.+.|+...+. ++++.+++.|+.++.||... +.
T Consensus 238 ~~~----------------i~-~~~~~g~~~~~~~~~H~~~~~~-~~~~~l~~~g~~v~~~p~s~-------------~~ 286 (451)
T 4dyk_A 238 ERP----------------LA-RLHRLGLLGPRFQAVHMTQVDN-DDLAMLVETNSSVIHCPESN-------------LK 286 (451)
T ss_dssp SCH----------------HH-HHHHTTCCSTTEEEEECCCCCH-HHHHHHHHHTCEEEECHHHH-------------HH
T ss_pred CCH----------------HH-HHHHCCCCCCCeEEEECCCCCH-HHHHHHHHcCCEEEEChhhh-------------hh
Confidence 210 11 1122233456788999998877 88999999999999888642 11
Q ss_pred ccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHH--hcCCCCHH
Q 009410 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMV--ESGQISVT 410 (535)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~--~~~~ls~~ 410 (535)
.+... .++++++++|+++++|||+.+.+...+ +|. +.++....++.. ...++|++
T Consensus 287 ~~~~~------------~~~~~~~~~Gv~v~lgtD~~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~~~~ 343 (451)
T 4dyk_A 287 LASGF------------CPVEKLWQAGVNVAIGTDGAASNNDLD-----LLG------ETRTAALLAKAVYGQATALDAH 343 (451)
T ss_dssp TTCCC------------CCHHHHHHHTCCEEECCCCGGGSSCCC-----HHH------HHHHHHHHHHHHHTCTTSSCHH
T ss_pred ccCCc------------ccHHHHHhCCCeEEEECCCCccCCCCC-----HHH------HHHHHHHHhhhhcCCCCCCCHH
Confidence 11111 128889999999999999765322211 111 223333333332 24679999
Q ss_pred HHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCee---EeeEEEEEEECCEEEEE
Q 009410 411 DYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRR---VKGKVEVTIAGGRVVWE 487 (535)
Q Consensus 411 eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~---~~~~v~~v~~~Gr~V~~ 487 (535)
++|+++|.|||+++|+++++|+|++||.|||||+|.+++...+. +.|+.... ...+|..||++|++||+
T Consensus 344 ~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 415 (451)
T 4dyk_A 344 RALRMATLNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQPV--------YDPVSQLIYASGRDCVRHVWVGGRQLLD 415 (451)
T ss_dssp HHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEEECCSGGGCSC--------SCHHHHHHHHCCGGGEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCCCcCcCCCCcCCEEEEeCCCCccCCC--------CCHHHHhhccCCCCCccEEEECCEEEEE
Confidence 99999999999999998889999999999999999887654332 12222210 12479999999999999
Q ss_pred CCeecccC
Q 009410 488 NDELNVVP 495 (535)
Q Consensus 488 ~~~~~~~~ 495 (535)
+|+++..+
T Consensus 416 ~g~~~~~d 423 (451)
T 4dyk_A 416 DGRLLRHD 423 (451)
T ss_dssp TTEESSSC
T ss_pred CCEECcCC
Confidence 99999876
No 24
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=100.00 E-value=8e-40 Score=341.38 Aligned_cols=375 Identities=19% Similarity=0.214 Sum_probs=252.2
Q ss_pred cccEEEEccEEEcCCC----ceeeeEEEeCCEEEEeeCCCCCC---CCceEEecCCCEEeecccccccccccccC-CC--
Q 009410 52 SSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS-- 121 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~----~~~~~I~I~~G~I~~Vg~~~~~~---~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~-- 121 (535)
.++++|+|++|+++++ .++++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+..... +.
T Consensus 13 ~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~~ 92 (472)
T 4dzh_A 13 PCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFAPARTVSRPDAALMPGLVNAHTHNPMTLLRGVAD 92 (472)
T ss_dssp EEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHEEEEEEEEEEEEEEEECEEEEEECGGGGGGTTSSC
T ss_pred cCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcCCCCeEEeCCCcEEEECccccccChhhHHhccccC
Confidence 5789999999998763 36899999999999999854322 35789999999999999999999977521 10
Q ss_pred -------------------CchhhhHH----HHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee-
Q 009410 122 -------------------ETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI- 177 (535)
Q Consensus 122 -------------------~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 177 (535)
.++++.+. ....++++||||++|+... .....+...+.+.+.....+.....
T Consensus 93 ~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~a~~~~g~r~~~~~~~~~~~~ 168 (472)
T 4dzh_A 93 DLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENYFF----ADVQAAVYKQHGFRALVGAVIIDFPT 168 (472)
T ss_dssp SCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECSC----HHHHHHHHHHTTCEEEEEEEECSSCC
T ss_pred CCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHhCCeEEEEecccCCCc
Confidence 12222222 2344789999999998621 2334444444444433333222111
Q ss_pred --ecCChhhHHHHHHHHHH-cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCC
Q 009410 178 --TKWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGI 253 (535)
Q Consensus 178 --~~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~ 253 (535)
.....+..+.+.++.+. .+...+++...++..+..+++.++++++.|+++|+++.+|+.+. ......++ ..|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~---~~g~ 245 (472)
T 4dzh_A 169 AWASSDDEYFARAGELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVA---QYGQ 245 (472)
T ss_dssp SSCSSHHHHHHHHHHHHHHHTTCSSEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH---HHSS
T ss_pred ccccCHHHHHHHHHHHHHHhCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH---HhCC
Confidence 11123344444444432 35667888777777788899999999999999999999999543 33322222 2221
Q ss_pred CCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccc
Q 009410 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVT 333 (535)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 333 (535)
. .+..+ ......+.++.+.|+...+. ++++.+++.|+.++.||... +..
T Consensus 246 ~----------------~i~~~-~~~g~~~~~~~~~H~~~l~~-~~i~~l~~~g~~v~~~p~s~-------------~~~ 294 (472)
T 4dzh_A 246 R----------------PLARL-DRLGLVNDRLIAVHMTQLTE-AEIHLCAERGVSVVHCPESN-------------LKL 294 (472)
T ss_dssp C----------------HHHHH-HHHTCCSTTEEEEECCSCCH-HHHHHHHHHTCEEEECHHHH-------------HHT
T ss_pred C----------------HHHHH-HHcCCCCCCeEEEeccCCCH-HHHHHHHHcCCEEEEChHHH-------------Hhc
Confidence 1 01112 22233456788999998887 88999999999999887642 111
Q ss_pred cceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHH--hcCCCCHHH
Q 009410 334 AAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMV--ESGQISVTD 411 (535)
Q Consensus 334 ~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~--~~~~ls~~e 411 (535)
+... .+++.++++|+++++|||+...+...+ +|. ++++.....+.. ...++|+++
T Consensus 295 ~~~~------------~~~~~~~~~Gv~v~lgtD~~~~~~~~~-----~~~------~~~~a~~~~~~~~~~~~~l~~~~ 351 (472)
T 4dzh_A 295 ASGF------------CPACALQRASVNLAIGTDGCASNNDLD-----MFS------ENRTAAILAKAVANDATALDAAT 351 (472)
T ss_dssp TCCC------------CCHHHHHHTTCEEEECCCCTTSSCCCC-----HHH------HHHHHHHHHHHHHTCTTSSCHHH
T ss_pred CCCC------------ccHHHHHHCCCCEEEECCCCcCCCCCC-----HHH------HHHHHHHHhhhhcCCCCcCCHHH
Confidence 1111 128899999999999999764322211 111 223322222222 235799999
Q ss_pred HHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCee---EeeEEEEEEECCEEEEEC
Q 009410 412 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRR---VKGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 412 al~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~---~~~~v~~v~~~Gr~V~~~ 488 (535)
+|+++|.|||+++|+++++|+|++||.|||||+|.+++...+. +.|+.... ...+|..||++|++||++
T Consensus 352 al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~~~~~~l~~~~~~~~V~~v~v~G~~v~~~ 423 (472)
T 4dzh_A 352 TLRAATLGGARALGFGDRIGSIEVGKQADLVCVDLSALETQPL--------HHVLSQLIYAAGRHQVTDVWIAGKPKLVQ 423 (472)
T ss_dssp HHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSC--------SCHHHHHHHTCCGGGEEEEEETTEEEEET
T ss_pred HHHHHHHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCCccCCc--------cCHHHHHhhcCCCCCceEEEECCEEEEEC
Confidence 9999999999999998889999999999999999887653332 12222211 134799999999999999
Q ss_pred CeecccC
Q 009410 489 DELNVVP 495 (535)
Q Consensus 489 ~~~~~~~ 495 (535)
|+++..+
T Consensus 424 g~~~~~d 430 (472)
T 4dzh_A 424 RELIDMD 430 (472)
T ss_dssp TEETTCC
T ss_pred CEECcCC
Confidence 9999876
No 25
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=100.00 E-value=8e-39 Score=333.61 Aligned_cols=397 Identities=18% Similarity=0.175 Sum_probs=273.2
Q ss_pred cCcccEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhh
Q 009410 50 QSSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDF 127 (535)
Q Consensus 50 ~~~~~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~ 127 (535)
.|+++++|+|++|+|+++ ...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+...... .+.
T Consensus 4 ~~~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~v~PG~iD~H~H~~~~~~~--~~~-- 78 (480)
T 3gip_A 4 AEKLDFKITGGWIIDGTGAPRRRADLGVRDGRIAAIGELGA-HPARHAWDASGKIVAPGFIDVHGHDDLMFVE--KPD-- 78 (480)
T ss_dssp -CCEEEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-SCEEEEEECTTSEEEECEEESSCCCTTHHHH--STT--
T ss_pred cccCCEEEECcEEECCCCCeeeeeEEEEECCEEEEecCCCC-CCCCeEEECCCCEEccCEEeccccccccccC--Chh--
Confidence 356789999999999876 478999999999999998643 4468899999999999999999998654111 111
Q ss_pred HHHHHHHHhCCcEEEecc---------ccCCCCC-h---------HHHHHHHHHHh--cccccccceeeeee--------
Q 009410 128 FSGQAAALAGGTTMHIDF---------VIPINGS-L---------TAGFEAYEKKA--KNSCMDYGFHMAIT-------- 178 (535)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~---------~~~~~~~-~---------~~~~~~~~~~~--~~~~~~~~~~~~~~-------- 178 (535)
....+++||||+++. ....... . +..+..+.... ....++++++.+..
T Consensus 79 ---~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g 155 (480)
T 3gip_A 79 ---LRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADVPAYFAALDAQRPMINVAALVGHANLRLAAMR 155 (480)
T ss_dssp ---CHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCS
T ss_pred ---HHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCHHHHHHHHHhCCCCceEEEccccHHHHHHhcC
Confidence 235589999999983 1111000 0 11122222221 23455666554322
Q ss_pred ----cCChhhHHHHHHHHH---HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHc
Q 009410 179 ----KWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIEL 251 (535)
Q Consensus 179 ----~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~ 251 (535)
..+.+...++.++.+ +.|+.+++.+..|......+.+++.++++.++++|.++.+|+++...
T Consensus 156 ~~~~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~----------- 224 (480)
T 3gip_A 156 DPQAAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAERRRLHTSHIRNEAD----------- 224 (480)
T ss_dssp STTSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHHHHHHHHHHHHTTCEEEEECSCSST-----------
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCCcccCCHHHHHHHHHHHHHcCCEEEEEecCccc-----------
Confidence 123445566666553 57999999988776555568899999999999999999999976421
Q ss_pred CCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc---------CHHHHHHHHHHHHcCCcEEeccccceEeeC
Q 009410 252 GITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM---------SMDAMEEIAKARKAGQRVIGEPVVSGLVLD 322 (535)
Q Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~---------~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~ 322 (535)
.+.+++.++++++++.+.++++.|++ ..+.++.++.+++.|++|+++.+++++..+
T Consensus 225 ---------------~~~~a~~e~i~la~~~g~~v~i~H~s~~~~~~~~~~~~~l~~i~~a~~~G~~Vt~e~~p~~~~~t 289 (480)
T 3gip_A 225 ---------------GVEAAVEEVLAIGRGTGCATVVSHHKCMMPQNWGRSRATLANIDRAREQGVEVALDIYPYPGSST 289 (480)
T ss_dssp ---------------THHHHHHHHHHHHHHHCCEEEETTCCCCSGGGTTTHHHHHHHHHHHHHTTCCEEEEECSCSCEEE
T ss_pred ---------------cHHHHHHHHHHHHHHhCCCEEEEEEeccCccchhhHHHHHHHHHHHHHcCCceEEEeeccccCcc
Confidence 12466788889999999999999998 367778899999999999999999998887
Q ss_pred cccccCcCccccceeEE---cCCCCC-----------cccHHHHH-----------------HHHhcCCeEEEeCCCCCC
Q 009410 323 DSWLWHSDFVTAAKYVM---SPPIRA-----------SGHNKALQ-----------------AALATGILQLVGTDHCAF 371 (535)
Q Consensus 323 ~~~~~~~~~~~~~~~~~---~p~~r~-----------~~~~~~~~-----------------~~l~~Gv~~~lgtD~~~~ 371 (535)
...+.+........... .|+.+. ....+.+. ..+..+....+|||+.+.
T Consensus 290 ~~~l~~~~~~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~gsD~~~~ 369 (480)
T 3gip_A 290 ILIPERAETIDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDEDEVKRIFQHPCCMVGSDGLPN 369 (480)
T ss_dssp ECCGGGTTTSSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCTT
T ss_pred hhhhcCHHHHHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhccCCeEEEeCCHHHHHHHHcCCCeEEecCCccc
Confidence 65554432211111000 144422 11122222 222334557888997654
Q ss_pred ChhhhhcCCCCcccCcchHHHHHHHHHHHHHh-cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCce
Q 009410 372 NSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE-SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSF 450 (535)
Q Consensus 372 ~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~-~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~ 450 (535)
... ++. ..+..++..+..+++ .+.+|++++++++|.+||+++|++ ++|+|++|+.|||||+|.+..+
T Consensus 370 ~~~-------~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~t~~~a~~~g~~-~~G~l~~G~~AD~vv~d~~~~~ 437 (480)
T 3gip_A 370 DAR-------PHP----RLWGSFTRVLGRYVREARLMTLEQAVARMTALPARVFGFA-ERGVLQPGAWADVVVFDPDTVA 437 (480)
T ss_dssp CSS-------CCT----HHHHHHHHHHHCCCCCTCSSCHHHHHHHHTHHHHHHHTCT-TCSSCSTTSBCCEEEECTTTCB
T ss_pred CCC-------CCh----hhhhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHcCCC-CCCccCCCCCCCEEEEcCcccc
Confidence 322 111 234456666654555 466999999999999999999995 4699999999999999988754
Q ss_pred eeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecC
Q 009410 451 EITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 504 (535)
Q Consensus 451 ~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~ 504 (535)
.. ..+.+ .+.+ ...|.+||++|++||++|+++. .+|++|++.
T Consensus 438 ~~--~~~~~--~~~~------~~~v~~v~v~G~~v~~~g~~~~--~~G~~lr~~ 479 (480)
T 3gip_A 438 DR--ATWDE--PTLA------SVGIAGVLVNGAEVFPQPPADG--RPGQVLRAG 479 (480)
T ss_dssp CC--CCSSS--TTCC------CBSEEEEEETTEEEESSCCSSS--CCCCBCCC-
T ss_pred Cc--ccccc--cccc------CCCccEEEECCEEEEECCeEcC--CCCcCcCCC
Confidence 32 11111 1222 3469999999999999999998 589999864
No 26
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=100.00 E-value=8.5e-39 Score=332.52 Aligned_cols=375 Identities=17% Similarity=0.158 Sum_probs=247.7
Q ss_pred EEEEcc-EEEcCCC----ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-C--------
Q 009410 55 ILIKGG-TVVNAHH----QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G-------- 120 (535)
Q Consensus 55 ~vi~n~-~vi~~~~----~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g-------- 120 (535)
++|+|+ .|+++++ .++++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..... +
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~~~~~~ 81 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSDRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERVT 81 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCCCTTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGGGSSCC
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCCCCCCCeEEeCCCCEEecCeeecccccchhhhcccccCCCCC
Confidence 789999 7777664 2689999999999999987554557899999999999999999999976522 1
Q ss_pred -------------------CCchhhhH----HHHHHHHhCCcEEEeccccCCCC-----ChHHHHHHHHHHhcccccccc
Q 009410 121 -------------------SETIDDFF----SGQAAALAGGTTMHIDFVIPING-----SLTAGFEAYEKKAKNSCMDYG 172 (535)
Q Consensus 121 -------------------~~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 172 (535)
..++++++ .....++++||||+.|+...... .....++...+.+.+..+..+
T Consensus 82 l~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~ 161 (456)
T 3ls9_A 82 MASWLEGVLTRSAGWWRDGKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIRFHAARS 161 (456)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCCTHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHhccccccccccccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccchhHHHHHHHHHHcCCEEEEEcc
Confidence 11122222 12344689999999999433222 233345555555544333222
Q ss_pred eeee------e-----ecCChhhHHHHHHHHHH-cC---CCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 173 FHMA------I-----TKWDEVVSDEMEVMVKE-KG---INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 173 ~~~~------~-----~~~~~~~~~~~~~~~~~-~g---~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
.+.. . .....+..++..++.+. .+ ...+++...+++....+++.++++++.|+++|+++++|+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e 241 (456)
T 3ls9_A 162 SMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYE 241 (456)
T ss_dssp CCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred ccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 2110 0 01112334444454432 23 44566667777778889999999999999999999999966
Q ss_pred hhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccc
Q 009410 238 GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVS 317 (535)
Q Consensus 238 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~ 317 (535)
........+. .|.. ..+.+......+.++.+.|+...+. ++++.+++.|+.++.||..+
T Consensus 242 ~~~~~~~~~~---~~~~-----------------~~~~~~~~g~~~~~~~i~H~~~~~~-~~~~~l~~~g~~~~~~p~s~ 300 (456)
T 3ls9_A 242 PLDAGMSDHL---YGMT-----------------PWRFLEKHGWASDRVWLAHAVVPPR-EEIPEFADAGVAIAHLIAPD 300 (456)
T ss_dssp TTHHHHHHHH---HSSC-----------------HHHHHHHTTCSSTTEEEEECCSCCG-GGHHHHHHHTCEEEECHHHH
T ss_pred CchHHHHHHH---hCCC-----------------HHHHHHHcCCCCCCcEEEeccCCCH-HHHHHHHHcCCEEEEChhHH
Confidence 5433222221 1211 0111222233456788999988776 78999999999999888642
Q ss_pred eEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHH
Q 009410 318 GLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLV 397 (535)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~ 397 (535)
. ..+... .+++.++++|+++++|||+.+.+.... +|. ++.+...
T Consensus 301 ~-------------~l~~~~------------~~~~~~~~~Gv~v~lgtD~~~~~~~~~-----~~~------~~~~~~~ 344 (456)
T 3ls9_A 301 L-------------RMGWGL------------APIREYLDAGITVGFGTTGSASNDGGN-----LLG------DLRLAAL 344 (456)
T ss_dssp H-------------HTTCCC------------CCHHHHHHTTCEEEECCCCTTSSCCCC-----HHH------HHHHHHH
T ss_pred h-------------hcCCCc------------chHHHHHHCCCcEEEECCCCccCCCCC-----HHH------HHHHHHH
Confidence 1 111111 128899999999999999765432211 111 1222222
Q ss_pred HHHHHhcC----CCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeE--
Q 009410 398 WDTMVESG----QISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV-- 471 (535)
Q Consensus 398 ~~~~~~~~----~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~-- 471 (535)
..+..... ++|++++|+++|.|||+++|+++ +|+|++||.|||||+|.+++...+. +.|+....+
T Consensus 345 ~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~-~G~l~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~~~~~ 415 (456)
T 3ls9_A 345 AHRPADPNEPEKWLSARELLRMATRGSAECLGRPD-LGVLEEGRAADIACWRLDGVDRVGV--------HDPAIGLIMTG 415 (456)
T ss_dssp HTGGGSTTCGGGSCCHHHHHHHTTHHHHHHTTCTT-SSCCSTTSBCCEEEEESCSGGGTTB--------SSHHHHHHHCC
T ss_pred HhccccccccccCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCccCEEEEeCCCCccCCC--------CChHHHhhccC
Confidence 21111011 69999999999999999999976 9999999999999999987654432 122221111
Q ss_pred -eeEEEEEEECCEEEEECCeecccC
Q 009410 472 -KGKVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 472 -~~~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
..+|..||++|++||++|+++..+
T Consensus 416 ~~~~v~~v~v~G~~v~~~g~~~~~d 440 (456)
T 3ls9_A 416 LSDRASLVVVNGQVLVENERPVLAD 440 (456)
T ss_dssp SBCCCSEEEETTEEEEETTEESSSC
T ss_pred CCCCeeEEEECCEEEEECCEeCCCC
Confidence 247999999999999999999876
No 27
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=2.9e-38 Score=331.70 Aligned_cols=377 Identities=17% Similarity=0.176 Sum_probs=235.4
Q ss_pred cccEEEEccE-EEcCC--------CceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-CC
Q 009410 52 SSKILIKGGT-VVNAH--------HQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS 121 (535)
Q Consensus 52 ~~~~vi~n~~-vi~~~--------~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~ 121 (535)
.++++|+|++ |++++ ...+++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+..... +.
T Consensus 9 ~~~~li~n~~~i~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~g~ 87 (492)
T 2paj_A 9 QPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP-RPGETIVDATDCVIYPAWVNTHHHLFQSLLKGE 87 (492)
T ss_dssp -CEEEEECBSEEBCCCCSSSSSCSBCCCCCEEEETTEEEEESSCCC-CTTCEEEECBTCEEEECEECCCCCGGGGGCCSC
T ss_pred CCCeEEECCEEEEecCCccccccceecccEEEEECCEEEEEcCCCC-CCCCeEEECCCcEEeeCccccccChhhHhhcCc
Confidence 4679999999 99986 2367899999999999998653 345789999999999999999999876521 10
Q ss_pred ----------------------CchhhhHHHHHH----HHhCCcEEEeccccCCCC-----ChHHHHHHHHHHhcccccc
Q 009410 122 ----------------------ETIDDFFSGQAA----ALAGGTTMHIDFVIPING-----SLTAGFEAYEKKAKNSCMD 170 (535)
Q Consensus 122 ----------------------~~~~~~~~~~~~----~l~~GvTtv~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 170 (535)
.+++++...... ++++||||++|+...... ......+...+.+.+....
T Consensus 88 ~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~ 167 (492)
T 2paj_A 88 PAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLL 167 (492)
T ss_dssp C-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhcccccccchHHHHHHHHHHcCCEEEEE
Confidence 123555444444 899999999998632211 1223333333333232221
Q ss_pred cceee-e------ee-----cCChhhHHHHHHHHHHc-CC---CEEEEEeecCCC-CcCCHHHHHHHHHHHHhcCCeEEE
Q 009410 171 YGFHM-A------IT-----KWDEVVSDEMEVMVKEK-GI---NSFKFFMAYKGS-FMINDELLIEGFKRCKSLGALAMV 233 (535)
Q Consensus 171 ~~~~~-~------~~-----~~~~~~~~~~~~~~~~~-g~---~~ik~~~~~~~~-~~~~~~~l~~~~~~a~~~g~~v~~ 233 (535)
.+... + .. ....+..+++..+.+.. +. ..++++..+.+. ...+.+.++++++.|++.|+++.+
T Consensus 168 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 247 (492)
T 2paj_A 168 RGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLGLRMHS 247 (492)
T ss_dssp ECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHHHHHHHHHHHHHTTCEEEE
T ss_pred chhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEecccCCCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 11110 0 00 00122345555555332 21 347777776666 678999999999999999999999
Q ss_pred EcCCh-hhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEe
Q 009410 234 HAENG-DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIG 312 (535)
Q Consensus 234 H~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~ 312 (535)
|+.+. .......+. .|.. .+..+.+ ....+.+..+.|+...+. +.++++++.|+.+..
T Consensus 248 H~~~~~~~~~~~~~~---~g~~----------------~~~~~~~-~g~~~~~~~i~H~~~~~~-~~i~~l~~~gv~v~~ 306 (492)
T 2paj_A 248 HLSETVGYQDSAYSM---YGKS----------------PVAFCGE-HDWLGSDVWYAHLVKVDA-DEIALLAQTGTGVAH 306 (492)
T ss_dssp ECC----------------CCC----------------HHHHHHH-TTCCSTTEEEESCCSCCH-HHHHHHHHHTCEEEE
T ss_pred EeCCChHHHHHHHHH---cCCC----------------HHHHHHH-CCCCCCCcEEEEEecCCH-HHHHHHHHcCCEEEE
Confidence 99763 222222211 1211 0111111 112234677889987766 779999999988887
Q ss_pred ccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHH
Q 009410 313 EPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEE 392 (535)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~ 392 (535)
||... +..+. ..+| ++.++++|+++++|||+.+.+.... ++. +.
T Consensus 307 ~p~~~-------------~~l~~---~~~p---------~~~~~~~Gv~v~lgTD~~~~~~~~~-----~~~------~~ 350 (492)
T 2paj_A 307 CPQSN-------------GRLGS---GICP---------VREMADAGVPVSIGVDGAASNEAAD-----MIS------EV 350 (492)
T ss_dssp CHHHH-------------HCC--------C---------CTTHHHHTCCEEECCCHHHHCSCCS-----HHH------HH
T ss_pred Cchhh-------------cccCC---CCCC---------HHHHHHCCCcEEEeCCCCCCCCCCC-----HHH------HH
Confidence 76531 11111 1123 4568899999999999754211111 111 11
Q ss_pred HHHHHHHHH----------------HhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCC
Q 009410 393 RMHLVWDTM----------------VESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARS 456 (535)
Q Consensus 393 ~l~~~~~~~----------------~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~ 456 (535)
......... ....++|++++|+++|.|||+++|++ ++|+|++||.|||||+|.++++..+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~lgl~-~~Gsl~~Gk~ADlvvld~~~~~~~~--- 426 (492)
T 2paj_A 351 HMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMGLD-EVGKVAVGYAADIAVYRLDDPRYFG--- 426 (492)
T ss_dssp HHHHHHHHHTC-------------------CCHHHHHHHHTHHHHHHHTCT-TSSCCSTTSBCCEEEEECCSGGGTT---
T ss_pred HHHHHHhhhhcccccccccccccccCCcCcCCHHHHHHHHHHHHHHHhCCC-CccccCCCCccCEEEEeCCCcccCC---
Confidence 111111111 12356999999999999999999997 7999999999999999988764321
Q ss_pred ccccCCCCCCCCeeE---eeEEEEEEECCEEEEECCeecccC
Q 009410 457 HHSRLDTNVYEGRRV---KGKVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 457 ~~~~~~~~p~~~~~~---~~~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
.++|+++... ..+|..||++|++||++|+++..+
T Consensus 427 -----~~~p~~~i~~~~~~~~v~~v~v~G~~v~~~g~~~~~d 463 (492)
T 2paj_A 427 -----LHDPAIGPVASGGRPSVMALFSAGKRVVVDDLIEGVD 463 (492)
T ss_dssp -----CSSGGGHHHHSCSCCEEEEEEETTEEEEETTBCTTCC
T ss_pred -----ccCHHHHHHhcCCCCCceEEEECCEEEEECCeeccCC
Confidence 1346654322 147999999999999999999875
No 28
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=1e-38 Score=333.11 Aligned_cols=384 Identities=16% Similarity=0.084 Sum_probs=242.1
Q ss_pred CcccEEEEccEEEcCCC---------------ceeeeEEEeCCEEEEeeCCCCCC---CCceEEecCCCEEeeccccccc
Q 009410 51 SSSKILIKGGTVVNAHH---------------QQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHT 112 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~---------------~~~~~I~I~~G~I~~Vg~~~~~~---~~~~vID~~G~~vlPGlID~H~ 112 (535)
|+..++|.+++|+++.. .++++|+|+||||++|++....+ .++++||++|++|+|||||+|+
T Consensus 1 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~ 80 (475)
T 2ood_A 1 MSLTTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAHPGVEITHIKDRIIVPGFIDGHI 80 (475)
T ss_dssp --CCEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHSTTCEEEEEEEEEEEECEEEEEE
T ss_pred CCccceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhccccCCCeEEeCCCcEEecceecCcc
Confidence 35567888999998654 25789999999999999753221 3578999999999999999999
Q ss_pred ccccccC----CCC-----------------chhhh----HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhccc
Q 009410 113 HLAMEFM----GSE-----------------TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNS 167 (535)
Q Consensus 113 H~~~~~~----g~~-----------------~~~~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~ 167 (535)
|+..... +.. +++.+ ......++++||||++|+...........++...+.+.+.
T Consensus 81 Hl~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~ 160 (475)
T 2ood_A 81 HLPQTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFTSSSPVATEELFEEASRRNMRV 160 (475)
T ss_dssp EGGGTTCTTCCSCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSSHHHHHHHHHHHHHHTCCE
T ss_pred cHHhHhhcCCCCCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEecccCchhHHHHHHHHHHcCCeE
Confidence 9864421 110 12233 2345678999999999975322111223333334444332
Q ss_pred ccccceeee-ee----cCChhhHHHHHHHHHH-cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc-CCeEEEEcCCh-h
Q 009410 168 CMDYGFHMA-IT----KWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENG-D 239 (535)
Q Consensus 168 ~~~~~~~~~-~~----~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~-~ 239 (535)
......... .. ....+..++..++.+. .+...+++.+.+++...++++.++++++.|++. |+++.+|+... .
T Consensus 161 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~g~~v~~H~~e~~~ 240 (475)
T 2ood_A 161 IAGLTGIDRNAPAEFIDTPENFYRDSKRLIAQYHDKGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTHISENPA 240 (475)
T ss_dssp EECCEECCSSSCTTTCCCHHHHHHHHHHHHHHHTTBTTEEEEEEECBGGGCCHHHHHHHHHHHHHCTTSEEEEECSCCHH
T ss_pred EEEeeecccCCCcccccCHHHHHHHHHHHHHHhccCCceEEEEeccccCcCCHHHHHHHHHHHHhCCCCcEEEeeCCChH
Confidence 211111100 01 1112233444444432 245567777777766778999999999999999 99999999654 3
Q ss_pred hHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceE
Q 009410 240 AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGL 319 (535)
Q Consensus 240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~ 319 (535)
......+ ..|... . ...+++.....+.+..+.|+...+. +.++++++.|+.+..||....
T Consensus 241 ~~~~~~~---~~g~~~--------~-------~~~~~~~~g~~~~~~~i~H~~~~~~-~~i~~~~~~g~~~~~~P~~~~- 300 (475)
T 2ood_A 241 ECSGVLV---EHPDCQ--------D-------YLGVYEKFDLVGPKFSGGHGVYLSN-NEFRRMSKKGAAVVFCPCSNL- 300 (475)
T ss_dssp HHHHHHH---HCTTCS--------S-------HHHHHHTTTCCSTTEEEECCTTCCH-HHHHHHHHHTCEEEECHHHHH-
T ss_pred HHHHHHH---HcCCCc--------c-------HHHHHHHcCCCCCCcEEEEeecCCH-HHHHHHHHcCCEEEEChhhhh-
Confidence 2332222 111100 0 0111111122456778899988776 889999999988887775311
Q ss_pred eeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCe--EEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHH
Q 009410 320 VLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGIL--QLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLV 397 (535)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~--~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~ 397 (535)
..+. ..+| +++++++|++ +++|||+.+..... +|. +......
T Consensus 301 ------------~l~~---~~~~---------~~~~~~~Gv~~~~~lgTD~~~~~~~~------~~~------~~~~~~~ 344 (475)
T 2ood_A 301 ------------FLGS---GLFR---------LGRATDPEHRVKMSFGTDVGGGNRFS------MIS------VLDDAYK 344 (475)
T ss_dssp ------------HTTC---CCCC---------HHHHTCTTSCCEEEECCCBTTBSCCC------HHH------HHHHHHH
T ss_pred ------------hccc---CcCC---------HHHHHhCCCCCcEEEEccCCCCCCcC------HHH------HHHHHHH
Confidence 1111 1122 8899999999 99999986522111 122 1111111
Q ss_pred HHH----HH--------------hcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCcc-
Q 009410 398 WDT----MV--------------ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHH- 458 (535)
Q Consensus 398 ~~~----~~--------------~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~- 458 (535)
... +. ...++|++++|+++|.|||+++|+++++|+|++||.|||||+|.++++.++.+...
T Consensus 345 ~~~~~~~~~~~~~~p~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~GsL~~Gk~ADlvvld~~~~~~~~~~~~~~ 424 (475)
T 2ood_A 345 VGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRGFWSVTLGGAEGLYIDDKLGNFEPGKEADFVALDPNGGQLAQPWHQSL 424 (475)
T ss_dssp HHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCSSTTHHHHHTT
T ss_pred HhcccchhccCCcccccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCccCEEEEeCCCccccccccccc
Confidence 111 01 12679999999999999999999988899999999999999999877654432111
Q ss_pred -----c----cCCCCCCCCeeE---eeEEEEEEECCEEEEECCe
Q 009410 459 -----S----RLDTNVYEGRRV---KGKVEVTIAGGRVVWENDE 490 (535)
Q Consensus 459 -----~----~~~~~p~~~~~~---~~~v~~v~~~Gr~V~~~~~ 490 (535)
+ ...++||++..+ .++|..||++|++||++++
T Consensus 425 ~~~~~s~~~~~~~~~p~~~~~~~~~~~~V~~t~v~G~~v~~~~~ 468 (475)
T 2ood_A 425 IADGAGPRTVDEAASMLFAVMMVGDDRCVDETWVMGKRLYKKSE 468 (475)
T ss_dssp C--CCSCCSHHHHHHHHHHHHHHCCGGGEEEEEETTEEEEECC-
T ss_pred cccccccccccchhhHHHHHHhhCCCCCeeEEEECCEEEEECCC
Confidence 0 112456665544 3689999999999999865
No 29
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=100.00 E-value=1.2e-36 Score=311.57 Aligned_cols=350 Identities=17% Similarity=0.160 Sum_probs=224.4
Q ss_pred cCcccEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCC------
Q 009410 50 QSSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS------ 121 (535)
Q Consensus 50 ~~~~~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~------ 121 (535)
.|+.+++|+|++|+++++ ...++|+|+||||++|++. .+.+.++||++|++|+|||||+|+|+. .....
T Consensus 3 ~~~~~~~i~n~~v~~~~~~~~~~~~v~I~~g~I~~ig~~--~~~~~~viD~~g~~v~PGlID~H~H~~-~~~~~~~~~~~ 79 (408)
T 3be7_A 3 LTSEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKI--NTKDATVISIPDLILIPGLMDSHVHIV-GNDSKGEESIA 79 (408)
T ss_dssp --CCCEEEEEEEEECTTTCCEECCEEEEETTEEEEEECC--CCSSSEEEEEEEEEEEECEEEEEECCS-SCCCCSGGGTT
T ss_pred cccceEEEEeeEEEeCCCCceeeeEEEEECCEEEEEeCC--CCCCCeEEECCCCEECcCceeeeEccc-CCCCcchhhhc
Confidence 346789999999999875 3348999999999999986 244678999999999999999999997 31111
Q ss_pred Cchhhh----HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhc----cccc------ccceeeeee---------
Q 009410 122 ETIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK----NSCM------DYGFHMAIT--------- 178 (535)
Q Consensus 122 ~~~~~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~----~~~~------~~~~~~~~~--------- 178 (535)
.+++.. ......++++||||++|+..... ....++...+.+. +... ..+.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~~~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~ 157 (408)
T 3be7_A 80 DSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANY--ADVSVRDAIERGVINGPTMLVSGPALGITGGHCDHNLLPPEFNYS 157 (408)
T ss_dssp CCTHHHHHHHHHHHHHHHTTTEEEEEECCCSTT--HHHHHHHHHHTTSSCCCEEEECCSCBBCTTSTTSCCCSCTTTCCC
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEeCCCccc--cCHHHHHHHHCCCCCCCEEEEccceeeccCCCCcccccccccccc
Confidence 122221 11467789999999999864322 2223333333222 1110 011111100
Q ss_pred ----cCC-hhhHHHHHHHHHHcCCCEEEEEeecC--------CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHH
Q 009410 179 ----KWD-EVVSDEMEVMVKEKGINSFKFFMAYK--------GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQ 245 (535)
Q Consensus 179 ----~~~-~~~~~~~~~~~~~~g~~~ik~~~~~~--------~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~ 245 (535)
... .+..+.++... ..|.+.+|++.+.. +....+.+.+.++++.|++.|+++.+|+.+...+...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~ 236 (408)
T 3be7_A 158 SEGVVDSPWEARKMVRKNR-KYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIGIKAAI 236 (408)
T ss_dssp CTTBCCSHHHHHHHHHHHH-HTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHH-hcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 001 12222333333 56889999986431 23567899999999999999999999998754322111
Q ss_pred HHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCccc
Q 009410 246 KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSW 325 (535)
Q Consensus 246 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 325 (535)
+ .+.. .+.|+..... +.++++++.|+.+++++..+..+...
T Consensus 237 -------------------------------~----~g~~-~i~H~~~~~~-~~i~~~~~~g~~v~~~~~~~~~~~~~-- 277 (408)
T 3be7_A 237 -------------------------------K----AGVD-SVEHASFIDD-ETIDMAIKNNTVLSMDIFVSDYILGE-- 277 (408)
T ss_dssp -------------------------------H----HTCS-EEEECTTCCH-HHHHHHHHTTCEEECCCSTHHHHHTT--
T ss_pred -------------------------------H----cCCC-EEEECCCCCH-HHHHHHHHCCCEEeeeecHHHHhhhh--
Confidence 1 1222 5889988776 88999999998776554321100000
Q ss_pred ccCcCccccceeEEcCCCCCc------ccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHH
Q 009410 326 LWHSDFVTAAKYVMSPPIRAS------GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWD 399 (535)
Q Consensus 326 ~~~~~~~~~~~~~~~p~~r~~------~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~ 399 (535)
+....+.|+.+.. .....++.++++|+++++|||+.+.+... .+ ..+.
T Consensus 278 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~~p~~~------~~--------~~~~---- 331 (408)
T 3be7_A 278 --------GAKAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIFDHGD------NA--------KQFA---- 331 (408)
T ss_dssp --------TTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTTBCTTC------GG--------GHHH----
T ss_pred --------ccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCch------HH--------HHHH----
Confidence 0000000110000 11356788999999999999974321110 00 1121
Q ss_pred HHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEE
Q 009410 400 TMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTI 479 (535)
Q Consensus 400 ~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~ 479 (535)
.+.+. ++|++++++++|.|||+++|++ ++|+|++||.|||||+|.|+...+. ...+|+.||
T Consensus 332 ~~~~~-gls~~~al~~~T~n~A~~lgl~-~~G~i~~G~~ADlvvld~~p~~~~~-----------------~~~~v~~v~ 392 (408)
T 3be7_A 332 YMVEW-GMTPLEAIQASTIKTATLFGIE-NIGQIKEGFDADIVGVIENPLANIR-----------------TLEEVAFVM 392 (408)
T ss_dssp HHHHT-TCCHHHHHHTTTHHHHHHHTCS-SCSSCCTTSBCCEEEESSCTTTCGG-----------------GTTSCCEEE
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHhCCC-cccccCCCCccCEEEECCCchhhHH-----------------HhhceeEEE
Confidence 22334 7999999999999999999997 8999999999999999988553221 013689999
Q ss_pred ECCEEEEECC
Q 009410 480 AGGRVVWEND 489 (535)
Q Consensus 480 ~~Gr~V~~~~ 489 (535)
++|++|+++.
T Consensus 393 ~~G~~v~~~~ 402 (408)
T 3be7_A 393 KEGKVYKREG 402 (408)
T ss_dssp ETTEEEEECC
T ss_pred ECCEEEeccc
Confidence 9999999874
No 30
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=2.8e-37 Score=319.46 Aligned_cols=374 Identities=16% Similarity=0.117 Sum_probs=231.4
Q ss_pred cccEEEEccEEEcCCC-----ceeeeEEEeCCEEEEeeCCCCCC-CCceEEecCCCEEeecccccccccccccC-CC---
Q 009410 52 SSKILIKGGTVVNAHH-----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--- 121 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~-----~~~~~I~I~~G~I~~Vg~~~~~~-~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~--- 121 (535)
+.+++|+|++|++++. .++++|+|+||||++|++....+ ++.++||++|++|+|||||+|+|+..... |.
T Consensus 8 m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~g~~~~ 87 (439)
T 2i9u_A 8 INLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDKYKGNPIIDFRNNIIIPGMNDLHAHASQYKNLGIGMD 87 (439)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCGGGTTSCEEEEEEEEEEECEEEEEEEGGGGGGTTCCCS
T ss_pred cccEEEEeeEEEecCCccceEEeccEEEEECCEEEEecccccccCCCceEEcCCCeEEEecceecccccchHhhhCCcCC
Confidence 4679999999999762 35889999999999999754321 35689999999999999999999986421 10
Q ss_pred -C-----------------chhhhHH----HHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeee-ee
Q 009410 122 -E-----------------TIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA-IT 178 (535)
Q Consensus 122 -~-----------------~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 178 (535)
. +++.+.. ..+.++++||||++|+...........++...+.+.+.......... .+
T Consensus 88 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~p 167 (439)
T 2i9u_A 88 KELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYNCP 167 (439)
T ss_dssp SCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEECEECCSSCC
T ss_pred CCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEccccccchHHHHHHHHHHcCCEEEEEeeeccccCC
Confidence 0 1122222 23568999999999975321111234444444444332221111100 01
Q ss_pred ----cCChhhHHHHHHHHHH--cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHc
Q 009410 179 ----KWDEVVSDEMEVMVKE--KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIEL 251 (535)
Q Consensus 179 ----~~~~~~~~~~~~~~~~--~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~ 251 (535)
....+..++..++.+. .+.+.+++++.+.....++.+.++++++.|++.|+++.+|+.+. .......+ ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~---~~ 244 (439)
T 2i9u_A 168 DYLTENYITSLNDTEEIILKYKDKSNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKS---LH 244 (439)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHTTTCSSEEECBEECCGGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH---HC
T ss_pred cccchhHHHHHHHHHHHHHHHhCCCCceEEEEecCCcCcCCHHHHHHHHHHHHhcCCcEEEeecCChHHHHHHHH---Hh
Confidence 0111223334444432 23456777766655556789999999999999999999999653 33322221 11
Q ss_pred CCCCcccccccCChhhHHHHHHHHHHHHHhcC-CCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcC
Q 009410 252 GITGPEGHALSRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (535)
Q Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (535)
+. ++.. +.. +......+ .++.+.|+..... +.++++++.|+.+..||...
T Consensus 245 ~~---------~~~~-----~~~-~~~~g~~~~~~~~i~H~~~~~~-~~~~~l~~~g~~~~~~p~~~------------- 295 (439)
T 2i9u_A 245 KK---------SNFY-----GEV-YDKFGLFGNTPTLMAHCIHSSK-EEINLIKRNNVTIVHCPTSN------------- 295 (439)
T ss_dssp TT---------CSSH-----HHH-HHHTTCSSSSCEEEEECCSCCH-HHHHHHHHTTCEEEECHHHH-------------
T ss_pred CC---------CCCH-----HHH-HHHcCCCCCCCeEEEEEecCCH-HHHHHHHHcCCEEEECccch-------------
Confidence 21 0101 111 11122233 5677899987766 78888999998887776531
Q ss_pred ccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHH------hc
Q 009410 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMV------ES 404 (535)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~------~~ 404 (535)
+..+.. .+| ++.++++|+++++|||+.+.. ... ++. +..+...+++.. ..
T Consensus 296 ~~l~~~---~~~---------~~~~~~~Gv~~~lgtD~~~~~-~~~-----~~~------~~~~~~~~~~~~~~~~~~~~ 351 (439)
T 2i9u_A 296 FNLGSG---MMP---------VRKYLNLGINVVLGSDISAGH-TCS-----LFK------VIAYAIQNSKIKWQESGKKD 351 (439)
T ss_dssp HHTTCC---CCC---------HHHHHHTTCEEEECCCBTTBC-CSC-----HHH------HHHHHHHHHHHHHHHTTSCS
T ss_pred hhcccc---cCC---------HHHHHHCCCcEEEecCCCCCC-CcC-----HHH------HHHHHHHHhccccccccCCC
Confidence 111111 122 788999999999999986521 111 111 222222222222 23
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeE---eeEEEEEEEC
Q 009410 405 GQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV---KGKVEVTIAG 481 (535)
Q Consensus 405 ~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~---~~~v~~v~~~ 481 (535)
.++|++++|+++|.|||+++| ++|+|++||.|||||+|.++++.. ++.. ++|+.+..+ ..+|..||++
T Consensus 352 ~~ls~~~al~~~T~~~A~~lg---~~Gsl~~G~~ADlvvld~~~~~~~-~~~~-----~~~~~~~~~~~~~~~v~~v~v~ 422 (439)
T 2i9u_A 352 MFLSTSEAFYMATKKGGSFFG---KVGSFEEGYDFDALVINDSNLYPE-DYDL-----TERLERFIYLGDDRNIMKRYVC 422 (439)
T ss_dssp CCCCHHHHHHHHTHHHHTTTS---SCSSCSTTCBCCEEEECCTTSCGG-GSCH-----HHHHHHHHHHCCGGGEEEEEET
T ss_pred CCCCHHHHHHHHHHHHHHHhc---cCCccCCCCccCEEEEeCCCcccc-CCCc-----cCHHHHheecCCCCCeeEEEEC
Confidence 679999999999999999999 589999999999999998876544 1111 223322211 2389999999
Q ss_pred CEEEEECCe
Q 009410 482 GRVVWENDE 490 (535)
Q Consensus 482 Gr~V~~~~~ 490 (535)
|++||++++
T Consensus 423 G~~v~~~~~ 431 (439)
T 2i9u_A 423 GNEIFGPKF 431 (439)
T ss_dssp TEEEC----
T ss_pred CEEEeeCCC
Confidence 999998765
No 31
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=100.00 E-value=2.9e-36 Score=308.31 Aligned_cols=352 Identities=15% Similarity=0.102 Sum_probs=221.9
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC----------CC
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM----------GS 121 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~----------g~ 121 (535)
+.+++|+|++|+++... ++|+|+||||++|++....+ +.++||++|++|+|||||+|+|+..... +.
T Consensus 4 ~~~~li~n~~v~~~~~~--~~v~I~~g~I~~vg~~~~~~-~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~g~ 80 (403)
T 2qt3_A 4 DFDLIIRNAYLSEKDSV--YDIGIVGDRIIKIEAKIEGT-VKDEIDAKGNLVSPGFVDAHTHMDKSFTSTGERLPKFWSR 80 (403)
T ss_dssp CEEEEEEEEEETTTTEE--EEEEEETTEEEEEESSCCSC-EEEEEECTTCBEEECEEEEEECGGGTTTTCSSSSCTTCSS
T ss_pred ccceEEEeeEecCCCee--EEEEEECCEEEEeecCCCCC-ccceEcCCCCEecccceeeeeccchhhcccccccccccCC
Confidence 46799999999987643 89999999999999865433 4689999999999999999999986531 11
Q ss_pred C-----------------chhhhHH----HHHHHHhCCcEEEeccccCCCCC---hHHHHHHHHHHhcccccccceee-e
Q 009410 122 E-----------------TIDDFFS----GQAAALAGGTTMHIDFVIPINGS---LTAGFEAYEKKAKNSCMDYGFHM-A 176 (535)
Q Consensus 122 ~-----------------~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~ 176 (535)
. ++++++. ....++++||||++++....... ....+....+.. +......... .
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 159 (403)
T 2qt3_A 81 PYTRDAAIEDGLKYYKNATHEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVAKTKAVEAVLEAKEEL-KDLIDIQVVAFA 159 (403)
T ss_dssp CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTTTTHHHHHHHHHHHHH-TTTCEEEEEEEC
T ss_pred CcccCcCHHHHHHHhhhcCHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCccccchHHHHHHHHHHh-hcceeEEEEEcC
Confidence 0 1122222 35667899999998764432211 111111111111 1111111100 0
Q ss_pred --eecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhh-HHHHHHHHHHcCC
Q 009410 177 --ITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA-VFEGQKRMIELGI 253 (535)
Q Consensus 177 --~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~-~~~~~~~~~~~g~ 253 (535)
......+..+.++++. ..|.+.++.+ .++.....+++.++++++.|+++|+++.+|+..... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~-~~g~~~~~~~-~p~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~--------- 228 (403)
T 2qt3_A 160 QSGFFVDLESESLIRKSL-DMGCDLVGGV-DPATRENNVEGSLDLCFKLAKEYDVDIDYHIHDIGTVGVYS--------- 228 (403)
T ss_dssp TTCTTTSTTHHHHHHHHH-HTTCSEEECB-CTTTTTSCHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHH---------
T ss_pred CcccccCcchHHHHHHHH-hcCCCeEEEe-cCCCCCCChHHHHHHHHHHHHHcCCCeEEEeCCcccchhHH---------
Confidence 0011223344455544 5666666532 333334556799999999999999999999965532 1111
Q ss_pred CCcccccccCChhhHHHHHHHHHHHHHhcC--CCEEEEEccCHHH------HHHHHHHHHcCCcEEeccccceEeeCccc
Q 009410 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVN--TPLYVVHVMSMDA------MEEIAKARKAGQRVIGEPVVSGLVLDDSW 325 (535)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~H~~~~~~------~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 325 (535)
+..+++.+...+ .++.+.|+...+. .+.++++++.|+.++.+|...
T Consensus 229 ------------------~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~~~-------- 282 (403)
T 2qt3_A 229 ------------------INRLAQKTIENGYKGRVTTSHAWCFADAPSEWLDEAIPLYKDSGMKFVTCFSST-------- 282 (403)
T ss_dssp ------------------HHHHHHHHHHTTCTTSEEEEECTHHHHSCHHHHHHHHHHHHHHTCEEEEETTTC--------
T ss_pred ------------------HHHHHHHHHHcCCCCCeEEEehhhhccCChhhHHHHHHHHHHcCCEEEECCCCC--------
Confidence 122233333333 3678999987653 268899999999998887420
Q ss_pred ccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHh-c
Q 009410 326 LWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE-S 404 (535)
Q Consensus 326 ~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~-~ 404 (535)
.. ..++++++++|+++++|||+...... ++.. . .+...+.... .... .
T Consensus 283 ---------~~------------~~~~~~~~~~Gv~v~lgtD~~~~~~~-------~~g~-~-~~~~~~~~~~-~~~~~~ 331 (403)
T 2qt3_A 283 ---------PP------------TMPVIKLLEAGINLGCASDNIRDFWV-------PFGN-G-DMVQGALIET-QRLELK 331 (403)
T ss_dssp ---------CT------------TCCHHHHHHTTCEEEEECCSCSSSSC-------SCCC-C-CHHHHHHHHH-HHTTCC
T ss_pred ---------CC------------CCCHHHHHHcCCcEEEeCCCCCCCCC-------CCCC-C-CHHHHHHHHH-HHhCcC
Confidence 00 02278899999999999997521110 0000 0 1111111111 0001 1
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEE
Q 009410 405 GQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRV 484 (535)
Q Consensus 405 ~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~ 484 (535)
.+++++++|+++|.|||+++|+++ .|+|++||.|||||+|.+++.. +.....+|..||++|++
T Consensus 332 ~~~~~~~al~~~T~~~A~~lg~~~-~g~i~~G~~ADlvv~d~~~~~~----------------~~~~~~~v~~v~v~G~~ 394 (403)
T 2qt3_A 332 TNRDLGLIWKMITSEGARVLGIEK-NYGIEVGKKADLVVLNSLSPQW----------------AIIDQAKRLCVIKNGRI 394 (403)
T ss_dssp SHHHHHHHHHHTTHHHHHHHTCGG-GCSSSTTSBCCEEEESSSSHHH----------------HHHHCCCEEEEEETTEE
T ss_pred CccCHHHHHHHHHHHHHHhcCCCc-ccCCCCCCcCCEEEEcCCChHH----------------HhhcCCCccEEEECCEE
Confidence 126889999999999999999965 4999999999999999875321 11113479999999999
Q ss_pred EEECCeec
Q 009410 485 VWENDELN 492 (535)
Q Consensus 485 V~~~~~~~ 492 (535)
|+++|+++
T Consensus 395 v~~~g~~~ 402 (403)
T 2qt3_A 395 IVKDEVIV 402 (403)
T ss_dssp EEESSSBC
T ss_pred EecCCccc
Confidence 99999876
No 32
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=100.00 E-value=1.6e-37 Score=323.03 Aligned_cols=365 Identities=18% Similarity=0.180 Sum_probs=227.4
Q ss_pred cccEEEEccEEEcCCC--c-eeeeEEE-eCCEEEEeeC--CCCCCCCceEEecCCCEEeecccccccccccccCCCC---
Q 009410 52 SSKILIKGGTVVNAHH--Q-QIADVYV-EDGIVVAVQP--NINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE--- 122 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~--~-~~~~I~I-~~G~I~~Vg~--~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~--- 122 (535)
..+++|+|++|+++++ . .+++|+| +||||++|++ ....+.+.++||++|++|+|||||+|+|+........
T Consensus 12 ~~~~li~n~~i~~~~~~~~~~~~~v~I~~~g~I~~Vg~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 91 (458)
T 2p9b_A 12 EPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVMPGLINAHTHLFSQGKPLNPKL 91 (458)
T ss_dssp CCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCCCTTCEEEECTTCEEEECEEEEEECSCC---------
T ss_pred CCcEEEEeeEEEeCCCCccccCcEEEEecCCEEEEEeccccCCCCCCCeEEECCCCEEccceeeeeeccccccccccccc
Confidence 4679999999999874 2 4689999 9999999997 4433446789999999999999999999986621100
Q ss_pred ------------ch---------hhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhc----ccccccceee--
Q 009410 123 ------------TI---------DDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK----NSCMDYGFHM-- 175 (535)
Q Consensus 123 ------------~~---------~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-- 175 (535)
.. ..+......++++||||++|+..... ....++...+.+. +......+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~g~~~g~r~~~~g~~~~~~ 169 (458)
T 2p9b_A 92 ATPKGQRMVATFAHSPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGY--EVVTLRDQIDAGQILGPRILASGPLMAIP 169 (458)
T ss_dssp --------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSS--HHHHHHHHHHTTSSCCCEEECCCSCEECC
T ss_pred cchhhhhhhhhhhhhcccccHHHHHHHHHHHHHHHcCCcEEEeCCCCcc--ccHHHHHHHHcCCCCCCeEEecccccccC
Confidence 00 12334567789999999999854322 2223333333222 1111111000
Q ss_pred ee--------ecCC-hhhHHHHHHHHHHcCCCEEEEEeec----------CCCCcCCHHHHHHHHHHHHhcCCeEEEEcC
Q 009410 176 AI--------TKWD-EVVSDEMEVMVKEKGINSFKFFMAY----------KGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (535)
Q Consensus 176 ~~--------~~~~-~~~~~~~~~~~~~~g~~~ik~~~~~----------~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 236 (535)
+. .... ++..+.+++.. +.|.+.+|++.+. .+.+.++.+.++++++.|+++|+++.+|+.
T Consensus 170 g~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 248 (458)
T 2p9b_A 170 EGHGAPLIALTSGTPEEARTAVAQNL-KAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAHAQ 248 (458)
T ss_dssp CSSCCCCEECCSCCHHHHHHHHHHHH-HTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCccccCccCCCHHHHHHHHHHHH-HcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCCeEEEEeC
Confidence 00 0011 22333444444 5688899998752 123456889999999999999999999998
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHH------HcCCcE
Q 009410 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKAR------KAGQRV 310 (535)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~------~~g~~v 310 (535)
+...+...+ +. +.. .+.|+..... +.+++++ +.|+.+
T Consensus 249 ~~~~i~~~~----~~-------------------------------G~~-~i~H~~~~~~-~~~~~~~~~~~~~~~g~~v 291 (458)
T 2p9b_A 249 SPEGVRRSL----LA-------------------------------GVD-TIEHGSVLDD-ELIGMFRHNPNALRGYSAL 291 (458)
T ss_dssp SHHHHHHHH----HH-------------------------------TCS-EEEECCCCCH-HHHHHHHCCTTSTTSCCEE
T ss_pred CHHHHHHHH----Hc-------------------------------CCC-EEEECCCCCH-HHHHHHhcccccccCCeEE
Confidence 654332211 11 222 4678877665 7888888 888766
Q ss_pred Eeccccce--EeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcc
Q 009410 311 IGEPVVSG--LVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN 388 (535)
Q Consensus 311 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~ 388 (535)
.++..+.. ........ .+. ......++.+.......++.++++|+++++|||+.. ... ++.
T Consensus 292 ~p~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~~-~~~-------~~~---- 354 (458)
T 2p9b_A 292 IPTLSAGLPLTLLGQDVT---GIT--DIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGM-TFV-------PQY---- 354 (458)
T ss_dssp ECCHHHHHHHHHSCHHHH---CCC--HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTTS-TTS-------CTT----
T ss_pred EeecchhhHHHhhhcccc---cCC--HHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCC-CCC-------ccc----
Confidence 43331111 10110000 000 000000111111223568889999999999999632 111 111
Q ss_pred hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCC
Q 009410 389 GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEG 468 (535)
Q Consensus 389 g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~ 468 (535)
.+... ++.+++..++|++++|+++|.|||+++|+++++|+|++||.|||||+|.|+...+.
T Consensus 355 ~~~~e----~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~Gsi~~Gk~ADlvvld~~p~~~~~--------------- 415 (458)
T 2p9b_A 355 ATWRE----LELLVAYAGFSPAEALHAATAVNASILGVDAETGSLEVGKSADLLVLNANPLDDLR--------------- 415 (458)
T ss_dssp CHHHH----HHHHHHHHCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCGG---------------
T ss_pred cHHHH----HHHHHHhcCCCHHHHHHHHHHHHHHHhCCcCCCCccCCCCcCCEEEECCCchhCHH---------------
Confidence 11112 22233444799999999999999999999888999999999999999988542211
Q ss_pred eeEeeEEEEEEECCEEEEEC--Ceeccc
Q 009410 469 RRVKGKVEVTIAGGRVVWEN--DELNVV 494 (535)
Q Consensus 469 ~~~~~~v~~v~~~Gr~V~~~--~~~~~~ 494 (535)
...+|..||++|++|+++ +++...
T Consensus 416 --~~~~v~~v~v~G~~v~~~~~~~~~~~ 441 (458)
T 2p9b_A 416 --ALEHPALVIAAGHPVWRPGPKRFADI 441 (458)
T ss_dssp --GGTSCSEEEETTEECCSCCCCCCHHH
T ss_pred --HhccceEEEECCEEEecCchhhhhhH
Confidence 024788999999999987 666654
No 33
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=100.00 E-value=2e-36 Score=317.50 Aligned_cols=392 Identities=17% Similarity=0.204 Sum_probs=251.7
Q ss_pred ccEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHH
Q 009410 53 SKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~ 130 (535)
++++|+|++|++++. ..+++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+..... .. ..
T Consensus 21 ~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~iD~~g~~v~PG~iD~H~H~~~~~~--~~-----~~ 92 (496)
T 1rk6_A 21 FDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSA-SSARRRIDVAGKVVSPGFIDSHTHDDNYLL--KH-----RD 92 (496)
T ss_dssp BSEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-SCBSCEEECTTCEEEECEEESSCCCTTHHH--HC-----TT
T ss_pred ccEEEECCEEEeCCCCceeccEEEEECCEEEEecCCCC-CCCCeEEeCCCCEEecCEeeeeecCCcccc--cc-----HH
Confidence 479999999999865 368899999999999997542 345689999999999999999999876411 01 12
Q ss_pred HHHHHhCCcEEEecccc-----CCC--C-----------------ChHHHHHHHHHHhcccccccceeeee---------
Q 009410 131 QAAALAGGTTMHIDFVI-----PIN--G-----------------SLTAGFEAYEKKAKNSCMDYGFHMAI--------- 177 (535)
Q Consensus 131 ~~~~l~~GvTtv~d~~~-----~~~--~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 177 (535)
...++++||||++++.. +.. . .....++... .+ ...+++.++.+.
T Consensus 93 ~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i~~~~~~~~~~~~~~~~~~e~~~-~~-~~~~~~~~~~g~~~~~~~~~~ 170 (496)
T 1rk6_A 93 MTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALR-AA-PPAVNAACMVGHSTLRAAVMP 170 (496)
T ss_dssp CHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHH-HS-CCSSEEEEEEEHHHHHHHHCS
T ss_pred HHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhhcccCcccccCccCHHHHHHHHh-cc-CCccceEEecccccceeeecc
Confidence 46789999999998742 110 0 1111122211 11 112222221110
Q ss_pred ---ecCChhhHHHHHHHHH---HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHc
Q 009410 178 ---TKWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIEL 251 (535)
Q Consensus 178 ---~~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~ 251 (535)
.....+...+++.+.+ +.|+.+++....+......+.+.+.++++.+++++.++.+|++....
T Consensus 171 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~----------- 239 (496)
T 1rk6_A 171 DLRREATADEIQAMQALADDALASGAIGISTGAFYPPAAHASTEEIIEVCRPLITHGGVYATHMRDEGE----------- 239 (496)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGGGTTCCHHHHHHHHTHHHHHTCEEEEECSCSST-----------
T ss_pred ccccCCCHHHHHHHHHHHHHHHHcCCcEEeeccccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeCCCcc-----------
Confidence 0012223344444432 56888887654332223457888999999999999999999975321
Q ss_pred CCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc---------CHHHHHHHHHHHHcCCcEEeccccceEeeC
Q 009410 252 GITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM---------SMDAMEEIAKARKAGQRVIGEPVVSGLVLD 322 (535)
Q Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~---------~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~ 322 (535)
.+.+.+.+.++++.+.+.++++.|+. .....+.++.+++.| .++++.++++.+..
T Consensus 240 ---------------~~~~~l~~~~~~a~~~g~~v~i~H~~~~~~~~~g~~~~~~~~l~~a~~~g-~v~~~~~~~~~~~~ 303 (496)
T 1rk6_A 240 ---------------HIVQALEETFRIGRELDVPVVISHHKVMGKLNFGRSKETLALIEAAMASQ-DVSLDAYPYVAGST 303 (496)
T ss_dssp ---------------THHHHHHHHHHHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHHS-CEEEEECSCSCEEE
T ss_pred ---------------cHHHHHHHHHHHHHHcCCeEEEEEEeccCCcchhhHHHHHHHHHHHHHcC-CeEEEEeccCCCCC
Confidence 12345667777888889999999983 333345666666688 88887776655443
Q ss_pred cccccCcCccccceeEEcCCC--------------CCcccHHHHHHHHhcCC-----------------eEEEeCCCCCC
Q 009410 323 DSWLWHSDFVTAAKYVMSPPI--------------RASGHNKALQAALATGI-----------------LQLVGTDHCAF 371 (535)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~p~~--------------r~~~~~~~~~~~l~~Gv-----------------~~~lgtD~~~~ 371 (535)
...+....-..+..+...|+. +......++++++++|+ ++++|||+.+.
T Consensus 304 ~~~~~~l~~~~~~~v~~~p~~~~l~~~~l~~~~~~~g~~~~~~l~~~l~~G~i~~~~~~~~v~~~~~~~~~~iGTD~~~~ 383 (496)
T 1rk6_A 304 MLKQDRVLLAGRTLITWCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGPTMIGSDGLPH 383 (496)
T ss_dssp ECCCCTTTTSSCEEEEEESSCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCTT
T ss_pred cccHHHhcCccceEEeccCCCcccccCcHHHHHHHcCCCHHHHHHHHHhcCceeecCCHHHHHHHHcCCCEEEecCCCCC
Confidence 322221100001222222322 22334567778888887 58999998765
Q ss_pred ChhhhhcCCCCcccCcchHHHHHHHHHHHHHh-cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCce
Q 009410 372 NSTQKAFGIDDFRKIPNGIEERMHLVWDTMVE-SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSF 450 (535)
Q Consensus 372 ~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~-~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~ 450 (535)
+.. ++. .....++..+..++. .+.+|++++++++|.|||++||++ ++|+|++|+.|||||+|.+++.
T Consensus 384 ~~~-------~~~----~~~~~~~~~l~~~v~~~~~l~~~~~l~~~T~~~A~~lgl~-~~G~i~~G~~ADlv~~d~~~~~ 451 (496)
T 1rk6_A 384 DER-------PHP----RLWGTFPRVLGHYSRDLGLFPLETAVWKMTGLTAAKFGLA-ERGQVQPGYYADLVVFDPATVA 451 (496)
T ss_dssp CSS-------CCT----HHHHHHHHHHCCCCCCTCSSCHHHHHHTTTHHHHHHHTCT-TCSSCCTTSBCCEEEECTTTCB
T ss_pred CCC-------CCc----hhhccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhCCC-CCCCcCCCCcccEEEEcCcccc
Confidence 311 111 112234444433333 345999999999999999999995 5899999999999999988753
Q ss_pred eeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccCCCceEeecC
Q 009410 451 EITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 504 (535)
Q Consensus 451 ~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~~~~~~~~~~ 504 (535)
..+ .+. +|+. ..+.|..||++|++|+++|+++..+ .|++++++
T Consensus 452 ~~~--~~~-----~~~~---~~~~v~~v~v~G~~v~~~g~~~~~~-~g~~l~~~ 494 (496)
T 1rk6_A 452 DSA--TFE-----HPTE---RAAGIHSVYVNGAAVWEDQSFTGQH-AGRVLNRA 494 (496)
T ss_dssp CCC--CSS-----STTC---CCBSEEEEEETTEEEEETTEECSCC-CCCBCCC-
T ss_pred ccc--ccc-----cccc---cCCCceEEEECCEEEEECCeeccCC-CceEeecC
Confidence 332 111 2222 2357999999999999999999876 58888753
No 34
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=100.00 E-value=1.5e-35 Score=304.58 Aligned_cols=348 Identities=17% Similarity=0.191 Sum_probs=224.2
Q ss_pred cccEEEEccEEEcCCC--c-eeeeEEEeCCEEEEeeCCCCCCCCc--eEEecCCCEEeecccccccccccccCCC-----
Q 009410 52 SSKILIKGGTVVNAHH--Q-QIADVYVEDGIVVAVQPNINVGDDV--KVLDATGKFVMPGGIDPHTHLAMEFMGS----- 121 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~--~-~~~~I~I~~G~I~~Vg~~~~~~~~~--~vID~~G~~vlPGlID~H~H~~~~~~g~----- 121 (535)
.++++|+|++|++++. . .+++|+|+||+|++|++.. .+.+. ++||++|++|+|||||+|+|+.......
T Consensus 6 ~~~~li~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~-~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 84 (418)
T 2qs8_A 6 DSKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGF-ISSNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQSKAQAPI 84 (418)
T ss_dssp -CCEEEEEEEECCSSCSSCEEEEEEEEETTEEEEEEESC-CCCTTSSEEEEEEEEEEEECEEEEEECTTCCCCCTTTSCS
T ss_pred CccEEEEeeEEEeCCCCccccCcEEEEECCEEEEEeCCC-CCCCCcceEEECCCCEECCCeeeeeeccccCCCCCchhhh
Confidence 4578999999999876 2 5789999999999999864 33456 8999999999999999999998652110
Q ss_pred -CchhhhH----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhc----cccccc------ceeee----------
Q 009410 122 -ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK----NSCMDY------GFHMA---------- 176 (535)
Q Consensus 122 -~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~~~~~---------- 176 (535)
.+++... .....++++||||++|+.... . ....++...+.+. +..... +.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-~-~~~~~~~~~~~g~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~ 162 (418)
T 2qs8_A 85 KVEREMQAILATQHAYVTFKSGFTTVRQVGDSG-L-VAISLRDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDDY 162 (418)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTEEEEEECCCSS-S-HHHHHHHHHHTTSSCCCEEEECCSCBEETTCTTCTTTTCCGGGC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCc-c-ccHHHHHHHHCCCCCCCeEEecCccccccCCCcccccccccccc
Confidence 1233221 246778999999999985332 1 2223333333321 111100 00000
Q ss_pred --------eecCChhhHHHHHHHHHHcCCCEEEEEeecC--------CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhh
Q 009410 177 --------ITKWDEVVSDEMEVMVKEKGINSFKFFMAYK--------GSFMINDELLIEGFKRCKSLGALAMVHAENGDA 240 (535)
Q Consensus 177 --------~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~--------~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~ 240 (535)
.....++..+.+++.. ..|.+.+|++.+.. +....+.+.++++++.|+++|+++.+|+.+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~ 241 (418)
T 2qs8_A 163 DYPVPEQGVVNGPYEVYAAVRQRY-KDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHAHGAEG 241 (418)
T ss_dssp CCCCGGGTEECSHHHHHHHHHHHH-HHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHH
T ss_pred ccccccccccCCHHHHHHHHHHHH-HcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence 0011122233333333 46889999987531 335678999999999999999999999986543
Q ss_pred HHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEe
Q 009410 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLV 320 (535)
Q Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 320 (535)
+...+ +. +.. .+.|+..... +.++++++.|+.+.++......+
T Consensus 242 i~~~~----~~-------------------------------g~~-~i~H~~~~~~-~~i~~l~~~gv~v~p~~~~~~~~ 284 (418)
T 2qs8_A 242 MKRAI----KA-------------------------------GVD-SIEHGTFMDL-EAMDLMIENGTYYVPTISAGEFV 284 (418)
T ss_dssp HHHHH----HH-------------------------------TCS-EEEECTTCCH-HHHHHHHHHTCEEECCHHHHHHH
T ss_pred HHHHH----Hc-------------------------------CCC-EEEECCCCCH-HHHHHHHHCCCEEeeeechHHHh
Confidence 32222 11 222 4788887765 78898988887643221110000
Q ss_pred eCcccccCcCccccceeEEcCCCCC-c-------ccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHH
Q 009410 321 LDDSWLWHSDFVTAAKYVMSPPIRA-S-------GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEE 392 (535)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~p~~r~-~-------~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~ 392 (535)
. .. +. ....|+.+. . .....++.++++|+++++|||+... .... .+ .
T Consensus 285 ~-~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~~-~~~~-----~~--------~ 339 (418)
T 2qs8_A 285 A-EK---------SK-IDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGVQ-KHGT-----NW--------K 339 (418)
T ss_dssp H-HH---------TT-STTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCCCCCBTTB-CTTC-----TT--------H
T ss_pred h-hh---------cc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCCCCcC-Ccch-----HH--------H
Confidence 0 00 00 001122111 0 1135688999999999999996431 1110 11 1
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEe
Q 009410 393 RMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVK 472 (535)
Q Consensus 393 ~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~ 472 (535)
.+.. +++. ++|++++|+++|.|||+++|+++++|+|++||.|||||+|.|++..++ ..
T Consensus 340 e~~~----~~~~-gls~~eal~~~T~n~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~~-----------------~~ 397 (418)
T 2qs8_A 340 EFVY----MVEN-GMPAMKAIQSATMETAKLLRIEDKLGSIESGKLADLIAVKGNPIEDIS-----------------VL 397 (418)
T ss_dssp HHHH----HHHT-TCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCGG-----------------GG
T ss_pred HHHH----HHHc-CCCHHHHHHHHHHHHHHHhCCCCCCcccCCCCccCEEEECCChhhCHH-----------------Hh
Confidence 2222 2333 799999999999999999999888999999999999999988664332 13
Q ss_pred eEEEEEEECCEEEEE
Q 009410 473 GKVEVTIAGGRVVWE 487 (535)
Q Consensus 473 ~~v~~v~~~Gr~V~~ 487 (535)
.+|+.||++|+++..
T Consensus 398 ~~i~~v~~~G~~~~~ 412 (418)
T 2qs8_A 398 ENVDVVIKDGLLYEG 412 (418)
T ss_dssp GGEEEEEETTEEEEC
T ss_pred cCccEEEECCEEEec
Confidence 589999999999864
No 35
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=100.00 E-value=1.7e-36 Score=315.66 Aligned_cols=383 Identities=17% Similarity=0.142 Sum_probs=241.4
Q ss_pred cccEEEEccEEEcCCC-----ceeeeEEEeC-CEEEEeeCCCCC--------CCCceEEec-CCCEEeeccccccccccc
Q 009410 52 SSKILIKGGTVVNAHH-----QQIADVYVED-GIVVAVQPNINV--------GDDVKVLDA-TGKFVMPGGIDPHTHLAM 116 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~-----~~~~~I~I~~-G~I~~Vg~~~~~--------~~~~~vID~-~G~~vlPGlID~H~H~~~ 116 (535)
+.+++|+|..|.+... .++++|+|+| |||++|++.... ..+.++||+ +|++|+|||||+|+|+.+
T Consensus 30 ~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~~ 109 (476)
T 4aql_A 30 PLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQ 109 (476)
T ss_dssp -CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGGG
T ss_pred CccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchHH
Confidence 4679999999987643 2689999998 999999986321 235789995 599999999999999865
Q ss_pred ccC-CCC--------------------chhh-----hHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccc
Q 009410 117 EFM-GSE--------------------TIDD-----FFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMD 170 (535)
Q Consensus 117 ~~~-g~~--------------------~~~~-----~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (535)
... |.. ..++ +.....+++++||||+.++...........++...+.+.+..+.
T Consensus 110 ~~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~~~~~~~~~~~~~a~~~~G~r~~~~ 189 (476)
T 4aql_A 110 YSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFVG 189 (476)
T ss_dssp GGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEecccCchHHHHHHHHHHHhCCEEEEe
Confidence 421 110 1111 11123467899999999774332222333455556666554332
Q ss_pred cceeeee------ecCChhhHHHHHHHHH---HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-hh
Q 009410 171 YGFHMAI------TKWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DA 240 (535)
Q Consensus 171 ~~~~~~~------~~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~ 240 (535)
....... .....+..++..++.+ ..+...++..+.++..+.++++.++++++.|+++|+++.+|+.+. .+
T Consensus 190 ~~~~d~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e 269 (476)
T 4aql_A 190 KVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISENRDE 269 (476)
T ss_dssp CEECSCCSSCTTSCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSHHH
T ss_pred eccccCCCCCcccccCHHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCceEEEecCCHHH
Confidence 2211110 1111223333333332 234567888888888888999999999999999999999998554 33
Q ss_pred HHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEe
Q 009410 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLV 320 (535)
Q Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 320 (535)
.....+. .+... ...+.++.....+.++.+.|+...++ ++++++++.|+.+..||..+
T Consensus 270 ~~~~~~~---~~~~~---------------~~~~~~~~~g~l~~~~~~~H~~~l~~-~~~~~l~~~g~~v~~~P~sn--- 327 (476)
T 4aql_A 270 VEAVKNL---YPSYK---------------NYTSVYDKNNLLTNKTVMAHGCYLSA-EELNVFHERGASIAHCPNSN--- 327 (476)
T ss_dssp HHHHHHH---CTTSS---------------SHHHHHHTTTCCSTTEEEEECTTCCH-HHHHHHHHHTCEEEECHHHH---
T ss_pred HHHHHHH---hCCCC---------------CHHHHHHHcCCCCCCEEEEeCCCCCH-HHHHHHHHcCCEEEECchhh---
Confidence 3322221 11100 01112222233456788999998877 78999999999999998752
Q ss_pred eCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHH
Q 009410 321 LDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDT 400 (535)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 400 (535)
+..+... .++++++++|+++++|||+.+..... .+. +++....+.+
T Consensus 328 ----------~~l~~g~------------~p~~~~~~~Gv~v~lGtD~~~~~~~~------~~~------~~~~a~~~~~ 373 (476)
T 4aql_A 328 ----------LSLSSGF------------LNVLEVLKHEVKIGLGTDVAGGYSYS------MLD------AIRRAVMVSN 373 (476)
T ss_dssp ----------HHTTCCC------------CCHHHHHHTTCEEEECCCTTTSSCCC------HHH------HHHHHHHHHH
T ss_pred ----------hhhCcch------------HHHHHHHHCCCcEEEeCCCCCCCCCC------HHH------HHHHHHHHHh
Confidence 2122221 12889999999999999975422111 111 2222222222
Q ss_pred HH-----hcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCce---eeecCCccccCCCCCCCCeeE-
Q 009410 401 MV-----ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSF---EITARSHHSRLDTNVYEGRRV- 471 (535)
Q Consensus 401 ~~-----~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~---~i~~~~~~~~~~~~p~~~~~~- 471 (535)
.. ...+++++++|+++|.|||+++|+++++|+|++||.|||||+|.+.+. ......+.+...+.|+++..+
T Consensus 374 ~~~~~~~~~~~l~~~~al~~aT~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~ 453 (476)
T 4aql_A 374 ILLINKVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILINPKASDSPIDLFYGDFFGDISEAVIQKFLYL 453 (476)
T ss_dssp HHHHTTSSSSCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCTTCSCCCCTHHHHSSSTTHHHHHHHHH
T ss_pred hhhcccCCCCcCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCCCCEEEEcCCCCCCccccccccccCCchhcHHHHHhhc
Confidence 22 135799999999999999999999888999999999999999988432 110000000011223332221
Q ss_pred --eeEEEEEEECCEEEEECCe
Q 009410 472 --KGKVEVTIAGGRVVWENDE 490 (535)
Q Consensus 472 --~~~v~~v~~~Gr~V~~~~~ 490 (535)
..+|+.||++||+||+.+.
T Consensus 454 ~~~~~V~~v~v~G~~v~~~~~ 474 (476)
T 4aql_A 454 GDDRNIEEVYVGGKQVVPFSS 474 (476)
T ss_dssp CCGGGEEEEEETTEEEECCC-
T ss_pred CCCCCccEEEECCEEEecCCC
Confidence 2369999999999998643
No 36
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.3e-36 Score=312.13 Aligned_cols=353 Identities=17% Similarity=0.148 Sum_probs=220.4
Q ss_pred cCcccEEEEccEEEcCCC---ceeeeEEEe-CCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchh
Q 009410 50 QSSSKILIKGGTVVNAHH---QQIADVYVE-DGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETID 125 (535)
Q Consensus 50 ~~~~~~vi~n~~vi~~~~---~~~~~I~I~-~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~ 125 (535)
.|+++++|+|++|++++. ..+++|+|+ ||||++|++....+.+.++||++|++|+|||||+|+|+... +.....
T Consensus 12 ~~~~~~li~n~~vv~~~~~~~~~~~~v~I~~~g~I~~Ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~~ 89 (417)
T 2ogj_A 12 PLQAPILLTNVKPVGFGKGASQSSTDILIGGDGKIAAVGSALQAPADTQRIDAKGAFISPGWVDLHVHIWHG--GTDISI 89 (417)
T ss_dssp --CCCEEEEEEEECSSCTTCCCSCEEEEECTTSBEEEEETTCCCSSCEEECCC--CEEEECEEEEEECCCBT--TBSSCC
T ss_pred cCCCcEEEECCEEEcCCCCccCccceEEEecCCEEEEeccCCCCCCCCeEEECCCCEEccCeeecccccccc--ccccCC
Confidence 345689999999999765 368899999 99999999764433356899999999999999999999875 221111
Q ss_pred hhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhc---cccccc---ceeee--eecCC---hhhHHHHHHHHHH
Q 009410 126 DFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK---NSCMDY---GFHMA--ITKWD---EVVSDEMEVMVKE 194 (535)
Q Consensus 126 ~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~--~~~~~---~~~~~~~~~~~~~ 194 (535)
. ....++++||||++|+............+...+... ..++++ +.... ..... ....+.++++.+.
T Consensus 90 ~---~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~~~~~~e~~~~~~~~~~~~~~~~~~ 166 (417)
T 2ogj_A 90 R---PSECGAERGVTTLVDAGSAGEANFHGFREYIIEPSRERIKAFLNLGSIGLVACNRVPELRDIKDIDLDRILECYAE 166 (417)
T ss_dssp C---GGGTSGGGTEEEEEEESSCCSTTHHHHHHHTTTTCSSEEEEEEESSTTTTTTTTTSCSCSSGGGCCHHHHHHHHHT
T ss_pred C---HHHHHHhCCcCeEEeCCcCCCcCHHHHHHHHhhccccCeEEEeccccCcCCCCCCcccccchhhcCHHHHHHHHHh
Confidence 1 123568999999999864333222222221221111 111111 11100 00000 0123445555532
Q ss_pred --cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhh-HHHHHHHHHHcCCCCcccccccCChhhHHHH
Q 009410 195 --KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA-VFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (535)
Q Consensus 195 --~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (535)
.+..++|+++.+......+.+.++++++.|++.|+++.+|+..... ..+....+
T Consensus 167 ~~~~~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~l----------------------- 223 (417)
T 2ogj_A 167 NSEHIVGLKVRASHVITGSWGVTPVKLGKKIAKILKVPMMVHVGEPPALYDEVLEIL----------------------- 223 (417)
T ss_dssp CTTTEEEEEEEESHHHHTTCTTHHHHHHHHHHHHHTCCEEEEECSSSSCHHHHHHHC-----------------------
T ss_pred CCCceEEEEEEecCCccccccHHHHHHHHHHHHHcCCcEEEEcCCCcccHHHHHHHh-----------------------
Confidence 2345678876643223457788899999999999999999964321 11111110
Q ss_pred HHHHHHHHHhcCCCEEEEEccC----------HHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcC
Q 009410 272 TTRAIRLAEFVNTPLYVVHVMS----------MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (535)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~H~~~----------~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 341 (535)
+....+.|+.. ....+.+..+++.|+.+..++...
T Consensus 224 -----------~~g~~~~H~~~~~~~~~~~~~~~~~~~i~~~~~~g~~v~~~~~~~------------------------ 268 (417)
T 2ogj_A 224 -----------GPGDVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRLDIGHGGA------------------------ 268 (417)
T ss_dssp -----------CTTCEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEEECCBCSS------------------------
T ss_pred -----------cCCCEEEeccCCCccchhccCHHHHHHHHHHHhcCcEEEecCCCc------------------------
Confidence 11124556543 222356666777786654433210
Q ss_pred CCCCcccHHHHHHHHhcC-CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHH
Q 009410 342 PIRASGHNKALQAALATG-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTEC 420 (535)
Q Consensus 342 ~~r~~~~~~~~~~~l~~G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~ 420 (535)
......++.++++| +++++|||+. .+... .+.. .+...++.+++ .+++++++++++|.||
T Consensus 269 ----~~~~~~~~~~~~~G~~~~~lgtD~~-~~~~~-----g~~~--------~l~~~~~~~~~-~~l~~~~al~~~T~n~ 329 (417)
T 2ogj_A 269 ----SFSFKVAEAAIARGLLPFSISTDLH-GHSMN-----FPVW--------DLATTMSKLLS-VDMPFENVVEAVTRNP 329 (417)
T ss_dssp ----SCCHHHHHHHHHTTCCCSBCCBCBS-TTTTT-----TTCC--------CHHHHHHHHHH-TTCCHHHHHHTTTHHH
T ss_pred ----cccchHHHHHHHcCCCceEEEcCCC-CCccC-----CChh--------HHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence 01235688999999 9999999976 43110 0111 23333433444 5699999999999999
Q ss_pred HHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEee----EEEEEEECCEEEEECCeecccC
Q 009410 421 ARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKG----KVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 421 A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~----~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
|++||+++ +|+|++||.|||||+|.+.++.. +.++.+..+.+ +|..||++|++||++++++...
T Consensus 330 A~~lgl~~-~G~l~~G~~ADlvv~d~~~~~~~----------~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~~~~~~ 397 (417)
T 2ogj_A 330 ASVIRLDM-ENRLDVGQRADFTVFDLVDADLE----------ATDSNGDVSRLKRLFEPRYAVIGAEAIAASRYIPRAR 397 (417)
T ss_dssp HHHTTCCC-SSTTSTTSBCEEEEEEEEEEEEE----------EECTTSCEEEEEEEEEEEEEEETTEEEECCCCCCCC-
T ss_pred HHHhCCCC-CCccCCCCcccEEEEecccCCce----------ecCCCCceEecccccceEEEEECCEEEEeCCccchHH
Confidence 99999976 99999999999999997654321 23566666555 8999999999999999988753
No 37
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=100.00 E-value=4e-35 Score=301.61 Aligned_cols=348 Identities=16% Similarity=0.174 Sum_probs=214.4
Q ss_pred ccEEEEc-cEEEcCCC--------------ceeeeEEEeCCEEEEeeCCC-C--CCCCceEEecCCCEEeeccccccccc
Q 009410 53 SKILIKG-GTVVNAHH--------------QQIADVYVEDGIVVAVQPNI-N--VGDDVKVLDATGKFVMPGGIDPHTHL 114 (535)
Q Consensus 53 ~~~vi~n-~~vi~~~~--------------~~~~~I~I~~G~I~~Vg~~~-~--~~~~~~vID~~G~~vlPGlID~H~H~ 114 (535)
++++|+| ++|+|+++ .++++|+|+||||++||+.. . .+ ..++||++|++|+|||||+|+|+
T Consensus 5 ~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~-~~~viD~~G~~v~PGfID~H~H~ 83 (421)
T 2bb0_A 5 IDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAGYE-ADEIIDCSGRLVTPGLVDPHTHL 83 (421)
T ss_dssp EEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTTTTTCE-EEEEEECTTCEEEECEEECCBCC
T ss_pred ccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEecccccccCC-CCeEEeCCCCEeccCeeccCcCc
Confidence 5799999 99998653 25789999999999999764 2 22 36899999999999999999998
Q ss_pred ccccC----------C---------------------CCchhhhHH----HHHHHHhCCcEEEeccccCCCC--ChHHHH
Q 009410 115 AMEFM----------G---------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPING--SLTAGF 157 (535)
Q Consensus 115 ~~~~~----------g---------------------~~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~~--~~~~~~ 157 (535)
..... + ..+++.+.. ....++++||||+.++...... .....+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~ 163 (421)
T 2bb0_A 84 VFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEKETELKQL 163 (421)
T ss_dssp CCCSCCGGGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSCCSHHHHHHHH
T ss_pred cccccchHHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccccCcCccchHHHH
Confidence 65410 0 011122222 2356789999999986322111 112233
Q ss_pred HHHHHHhcccccccce-eeee---e-cCC---hhhHHHHH----HHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHH
Q 009410 158 EAYEKKAKNSCMDYGF-HMAI---T-KWD---EVVSDEME----VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCK 225 (535)
Q Consensus 158 ~~~~~~~~~~~~~~~~-~~~~---~-~~~---~~~~~~~~----~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~ 225 (535)
+...+........+.. ..+. . ... .+..+.+. .+......+.++.+. +....+.+.++++++.|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~l~~~~~~a~ 240 (421)
T 2bb0_A 164 RVAKKLHESQPVDLVSTFMGAHAIPPEYQNDPDDFLDQMLSLLPEIKEQELASFADIFT---ETGVFTVSQSRRYLQKAA 240 (421)
T ss_dssp HHHHHHHHHSSSEEEEEEEEESSCCGGGTTCHHHHHHHHHTTHHHHHHTTCCSEEEEBB---CTTSBCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCceEEEEeeccccCChhhcccHHHHHHHHHHhhHHhhccCccccccccC---CcCCCCHHHHHHHHHHHH
Confidence 3333322211111111 0000 0 000 11111111 111112344554432 223458999999999999
Q ss_pred hcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHH
Q 009410 226 SLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARK 305 (535)
Q Consensus 226 ~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 305 (535)
++|+++.+|+....... .. +.....+.. .+.|+...+. ++++++++
T Consensus 241 ~~g~~v~~H~~~~~~~~-~~-------------------------------~~~~~~g~~-~~~H~~~~~~-~~i~~~~~ 286 (421)
T 2bb0_A 241 EAGFGLKIHADEIDPLG-GA-------------------------------ELAGKLKAV-SADHLVGTSD-EGIKKLAE 286 (421)
T ss_dssp HTTCEEEEEECSSSCCS-HH-------------------------------HHHHHTTCS-EEEECTTCCH-HHHHHHHH
T ss_pred HCCCCEEEEeccccccC-HH-------------------------------HHHHHcCCc-EEhhhhcCCH-HHHHHHHH
Confidence 99999999985321100 00 111122322 4789988877 88999999
Q ss_pred cCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCccc
Q 009410 306 AGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRK 385 (535)
Q Consensus 306 ~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~ 385 (535)
.|+.++.+|...+. ++ +... .+++.++++|+++++|||+.+... +..
T Consensus 287 ~g~~~~~~p~~~~~-----------l~-~~~~------------~~~~~~~~~Gv~v~lgtD~~~~~~--------~~~- 333 (421)
T 2bb0_A 287 AGTIAVLLPGTTFY-----------LG-KSTY------------ARARAMIDEGVCVSLATDFNPGSS--------PTE- 333 (421)
T ss_dssp HTCEEEECHHHHHH-----------TT-CCCC------------CCHHHHHHTTCCEEECCCBBTTTB--------CCC-
T ss_pred cCCeEEECCchhhh-----------hc-cccc------------chHHHHHHCCCeEEEeCCCCCCCC--------ccc-
Confidence 99888887753211 00 0010 127889999999999999754211 010
Q ss_pred CcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCC
Q 009410 386 IPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNV 465 (535)
Q Consensus 386 ~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p 465 (535)
.+...++..+...++|+++||+++|.|||+++|+++++|+|++||+|||||+|.|++..+..
T Consensus 334 -------~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~~~Gsl~~Gk~ADlvvld~~~~~~~~~----------- 395 (421)
T 2bb0_A 334 -------NIQLIMSIAALHLKMTAEEIWHAVTVNAAYAIGKGEEAGQLKAGRSADLVIWQAPNYMYIPY----------- 395 (421)
T ss_dssp -------CHHHHHHHHHHHSCCCHHHHHHHTTHHHHHHTTCTTTSSCCSTTSBCCEEEESSSSTTHHHH-----------
T ss_pred -------CHHHHHHHHhcccCCCHHHHHHHHHHHHHHHhCccCCccccCCCCcCCEEEECCcccccCHh-----------
Confidence 11112223344567999999999999999999998889999999999999999876533211
Q ss_pred CCCeeEeeEEEEEEECCEEEEEC-Ceec
Q 009410 466 YEGRRVKGKVEVTIAGGRVVWEN-DELN 492 (535)
Q Consensus 466 ~~~~~~~~~v~~v~~~Gr~V~~~-~~~~ 492 (535)
... ..+|..||++|++||++ |+++
T Consensus 396 -~~~--~~~v~~t~v~G~~v~~~~g~~~ 420 (421)
T 2bb0_A 396 -HYG--VNHVHQVMKNGTIVVNREGAIL 420 (421)
T ss_dssp -SCS--SCCEEEEEETTEEEEEC-----
T ss_pred -HcC--CCceEEEEECCEEEEeCCcccc
Confidence 000 13799999999999986 6654
No 38
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=100.00 E-value=3.3e-35 Score=306.74 Aligned_cols=382 Identities=18% Similarity=0.250 Sum_probs=231.4
Q ss_pred cccEEEEccEEE-cCCC----ceeeeEEEeCCEEEEeeCCCCCC-CCceEEecCCCEEeecccccccccccccC-CC---
Q 009410 52 SSKILIKGGTVV-NAHH----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--- 121 (535)
Q Consensus 52 ~~~~vi~n~~vi-~~~~----~~~~~I~I~~G~I~~Vg~~~~~~-~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~--- 121 (535)
+.+++|+|++|+ |+++ .++++|+|+||||++||+..+.+ .+.++||++|++|+|||||+|+|+.+... +.
T Consensus 28 p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~~~~~~~vIDa~G~~v~PG~ID~H~H~~~~~~~g~~~~ 107 (479)
T 3hpa_A 28 PKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAA 107 (479)
T ss_dssp -CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCSCCSEEEECTTEEEEECEEECCCCGGGGGSCSCTTT
T ss_pred CCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccCCCCCCeEEECCCCEEeeCceeHhhCcchhcccccccC
Confidence 568999999966 4443 26899999999999999876544 45789999999999999999999865421 00
Q ss_pred ------------------Cchhhh----HHHHHHHHhCCcEEEeccccCCCC--ChHHHHHHHHHHhcccccccceee--
Q 009410 122 ------------------ETIDDF----FSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHM-- 175 (535)
Q Consensus 122 ------------------~~~~~~----~~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-- 175 (535)
...+.. ......++..|+|++.+....... ............+.+.........
T Consensus 108 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 187 (479)
T 3hpa_A 108 QNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMSVG 187 (479)
T ss_dssp TTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEEEEECC--
T ss_pred CCcchHHHHhhhhhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeeccchhhHHHHHHHHHHhcchhhhhhheeecc
Confidence 011111 123445678999999987543332 344444444444433211111100
Q ss_pred ---e------eecCChhhHHHHHHHHHH---cC-CCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHH
Q 009410 176 ---A------ITKWDEVVSDEMEVMVKE---KG-INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVF 242 (535)
Q Consensus 176 ---~------~~~~~~~~~~~~~~~~~~---~g-~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~ 242 (535)
. ......+.......+... .+ ................+.+.+.++...|.+.|..+..|.......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~h~~~~~~~- 266 (479)
T 3hpa_A 188 QRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVND- 266 (479)
T ss_dssp --------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTTSCHHHHHHHHHHHHHHTCEEEEEESCSHHH-
T ss_pred ccccCCCchhhhhhhhhHHHHHHHHHHHhhhhcccccceeEecccccccCCHHHHHHHHHHHHhcCCeEEeecccchHH-
Confidence 0 000111122222222211 11 122333344455567789999999999999999999998544221
Q ss_pred HHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeC
Q 009410 243 EGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLD 322 (535)
Q Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~ 322 (535)
........|.. ...........+.+..+.|+..... ...+.+++.+..+..++.....
T Consensus 267 -~~~~~~~~g~~-----------------~~~~~~~~~~~~~~~~~~h~~~~~~-~~~~~~~~~~~~~~~~p~~~~~--- 324 (479)
T 3hpa_A 267 -IAYSREKFGMT-----------------PAEYAEDLGWVGHDVWHAHCVQLDD-AGIGLFARTGTGVAHCPCSNMR--- 324 (479)
T ss_dssp -HHC-------C-----------------HHHHHHHTTCCSTTEEEEECTTCCH-HHHHHHHHHTCEEEECHHHHHH---
T ss_pred -HHHHHHHcCCc-----------------hHHHHhhhccccccceeeeeEecch-hHHHHHHhcCCceeeccccccc---
Confidence 11111111110 0111112233456778899887766 6677778888777766543111
Q ss_pred cccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHH-HHH
Q 009410 323 DSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVW-DTM 401 (535)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~-~~~ 401 (535)
.+... .....+.+.|+++++|||+......... ..+......+ ...
T Consensus 325 ----------~~~~~------------~~~~~~~~~~~~v~~gtD~~~~~~~~~~-----------~~~~~~~~~~~~~~ 371 (479)
T 3hpa_A 325 ----------LASGI------------APVKKMRLAGVPVGLGVDGSASNDGAQM-----------VAEVRQALLLQRVG 371 (479)
T ss_dssp ----------TTCCC------------CCHHHHHHHTCCEEECCCCTTSSCCCCH-----------HHHHHHHHHHHHHH
T ss_pred ----------cccCc------------cchhHHHhcCCcEEeeccccccCCCccH-----------HHHHHHHHHHHhhh
Confidence 11111 1167778889999999997654322110 1122222222 222
Q ss_pred HhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEEC
Q 009410 402 VESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAG 481 (535)
Q Consensus 402 ~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~ 481 (535)
....++|++++|+++|.|||++||++ ++|+|++||+|||||||.+.++...+. .++.....|.+ .++|.+|||+
T Consensus 372 ~~~~~ls~~eal~~~T~~~A~~lgl~-~~G~I~~G~~ADlvv~D~~~~~~~~~~--~dp~~~lv~~~---~~~v~~tiV~ 445 (479)
T 3hpa_A 372 FGPDAMTAREALEIATLGGAKVLNRD-DIGALKPGMAADFAAFDLRQPLFAGAL--HDPVAALVFCA---PSQTAYTVVN 445 (479)
T ss_dssp HCTTSCCHHHHHHHTTHHHHHHHTCS-SSSSCSTTSBCCEEEEETTSGGGTTCT--TSHHHHHHHSS---CCCCSEEEET
T ss_pred ccccCCCHHHHHHHHHHHHHHHhCCC-CCccCCCCCcCCEEEEcCCCccccCCc--cCHHHHhhccC---CCCceEEEEC
Confidence 34567999999999999999999995 689999999999999999876554321 11111111222 3579999999
Q ss_pred CEEEEECCeecccC
Q 009410 482 GRVVWENDELNVVP 495 (535)
Q Consensus 482 Gr~V~~~~~~~~~~ 495 (535)
||+||+||+++..|
T Consensus 446 G~~V~~dG~~~~~D 459 (479)
T 3hpa_A 446 GKVVVREGRLATLD 459 (479)
T ss_dssp TEEEEETTEECSSC
T ss_pred CEEEEECCcCCCCC
Confidence 99999999999876
No 39
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=100.00 E-value=1.9e-35 Score=303.53 Aligned_cols=346 Identities=15% Similarity=0.129 Sum_probs=217.2
Q ss_pred ccEEEEccEEEcCCC-------ceeeeEEEeCCEEEEeeCCCCCCC--CceEEecCCCEEeecccccccccccccC----
Q 009410 53 SKILIKGGTVVNAHH-------QQIADVYVEDGIVVAVQPNINVGD--DVKVLDATGKFVMPGGIDPHTHLAMEFM---- 119 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~-------~~~~~I~I~~G~I~~Vg~~~~~~~--~~~vID~~G~~vlPGlID~H~H~~~~~~---- 119 (535)
++++|+|++|+|+++ ..+++|+|+||||++||+....+. +.++||++|++|+|||||+|+|+.....
T Consensus 5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~~ 84 (416)
T 2q09_A 5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGPYPAHWQDMKGKLVTPGLIDCHTHLIFAGSRAEE 84 (416)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC--CCTTSEECTTCEEEECEEEEEECCCCCSCCHHH
T ss_pred ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhccccCCCeEEeCCCCEECCcccccccCcchhhhhHHH
Confidence 578999999998765 157899999999999998654333 4679999999999999999999876411
Q ss_pred ------C---------------------CCchhhhHHH----HHHHHhCCcEEEeccccCCCC--ChHHHHHHHHHHhcc
Q 009410 120 ------G---------------------SETIDDFFSG----QAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKN 166 (535)
Q Consensus 120 ------g---------------------~~~~~~~~~~----~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~ 166 (535)
+ ..+++.+... ...++++||||+.|+...... .....++...+....
T Consensus 85 ~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2q09_A 85 FELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRLGEA 164 (416)
T ss_dssp HHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCcccChHhHHHHHHHHHHHHhh
Confidence 0 0122333222 366789999999997532211 112333333332221
Q ss_pred cccccce-eee---ee-cC---ChhhHHHH-----HHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEE
Q 009410 167 SCMDYGF-HMA---IT-KW---DEVVSDEM-----EVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (535)
Q Consensus 167 ~~~~~~~-~~~---~~-~~---~~~~~~~~-----~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (535)
...++.. ..+ .. .. ..+..+.. ..+......+.++.+. +....+.+.+.++++.|++.|+++.+
T Consensus 165 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~g~~v~~ 241 (416)
T 2q09_A 165 LPIRVKTTLLAAHAVPPEYRDDPDSWVETICQEIIPAAAEAGLADAVDVFC---EHIGFSLAQTEQVYLAADQYGLAVKG 241 (416)
T ss_dssp SSSEEEEEEEEETSCCGGGTTCHHHHHHHHHHTHHHHHHHTTCCSEEEEBB---STTSBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEeeeccccCCccccCCHHHHHHHHHhhhhHHHHhccccccccccc---CCCcCCHHHHHHHHHHHHHCCCcEEE
Confidence 1111111 000 00 00 01111111 1111112345555432 23356899999999999999999999
Q ss_pred EcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEec
Q 009410 234 HAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGE 313 (535)
Q Consensus 234 H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~ 313 (535)
|+....... ..+. +...+.. .+.|+...+. +.++++++.|+.++.+
T Consensus 242 H~~~~~~~~-~~~~-------------------------------~~~~g~~-~~~H~~~~~~-~~~~~~~~~g~~~~~~ 287 (416)
T 2q09_A 242 HMDQLSNLG-GSTL-------------------------------AANFGAL-SVDHLEYLDP-EGIQALAHRGVVATLL 287 (416)
T ss_dssp EESSSCCCS-HHHH-------------------------------HHHTTCS-EEEECTTCCH-HHHHHHHHHTCEEEEC
T ss_pred EECCCCchH-HHHH-------------------------------HHHcCCC-EEeecccCCH-HHHHHHHHcCCeEEEc
Confidence 986432100 0111 1112322 4788887776 8899999999888877
Q ss_pred cccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHH
Q 009410 314 PVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEER 393 (535)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~ 393 (535)
|...+.+ . +.. .+| ++.++++|+++++|||+.+.... .. .
T Consensus 288 p~~~~~~-----------~-~~~---~~~---------~~~~~~~Gv~~~~gtD~~~~~~~--------~~----~---- 327 (416)
T 2q09_A 288 PTAFYFL-----------K-ETK---LPP---------VVALRKAGVPMAVSSDINPGTAP--------IV----S---- 327 (416)
T ss_dssp HHHHHHT-----------T-CCC---CCC---------HHHHHHTTCCEEECCCCBTTTBC--------CC----C----
T ss_pred CccHHhh-----------c-ccc---ccC---------HHHHHHCCCeEEEecCCCCccCC--------CC----C----
Confidence 6532110 0 000 112 78899999999999997543111 00 0
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEee
Q 009410 394 MHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKG 473 (535)
Q Consensus 394 l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~ 473 (535)
+...++.++...++|++++|+++|.|||+++|+++++|+|++||.|||||+|.|++..+ ++... ..
T Consensus 328 ~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~------------~~~~~--~~ 393 (416)
T 2q09_A 328 LRMAMNMACTLFGLTPVEAMAGVTRHAARALGEQEQLGQLRVGMLADFLVWNCGHPAEL------------SYLIG--VD 393 (416)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSSCTTHH------------HHSCS--CC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCccceecCCCCCccEEEECCCchhhh------------hhhhc--cC
Confidence 11112233334579999999999999999999988899999999999999998866432 22211 35
Q ss_pred EEEEEEECCEEEEECC
Q 009410 474 KVEVTIAGGRVVWEND 489 (535)
Q Consensus 474 ~v~~v~~~Gr~V~~~~ 489 (535)
+|..||++|++||+++
T Consensus 394 ~v~~v~v~G~~v~~~~ 409 (416)
T 2q09_A 394 QLVSRVVNGEETLHGE 409 (416)
T ss_dssp CEEEEEETTEECCC--
T ss_pred cceEEEECCEEEEeCC
Confidence 8999999999999874
No 40
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=100.00 E-value=2.5e-36 Score=306.10 Aligned_cols=354 Identities=16% Similarity=0.108 Sum_probs=221.8
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCC-CEEeecccccccccccccCCCCchhhhHHH
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATG-KFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G-~~vlPGlID~H~H~~~~~~g~~~~~~~~~~ 130 (535)
+++++|+|++|++++ .++|+|+||+|++|++... +.+.++||++| ++|+|||||+|+|+... +....+ ..
T Consensus 4 ~~~~~i~~~~v~~~~---~~~v~i~~g~I~~ig~~~~-~~~~~~iD~~g~~~v~PG~ID~H~H~~~~--~~~~~~---~~ 74 (379)
T 2ics_A 4 DYDLLIKNGQTVNGM---PVEIAIKEKKIAAVAATIS-GSAKETIHLEPGTYVSAGWIDDHVHCFEK--MALYYD---YP 74 (379)
T ss_dssp CEEEEEEEEECTTSC---EEEEEEETTEEEEEESCCC-CCEEEEEECCTTCEEEECEEEEEECCCTT--SSSSCC---CH
T ss_pred cccEEEECCEEEcCC---cceEEEECCEEEEecCCCC-CCCCcEEeCCCCEEEccCEEEeccccCcc--CccccC---ch
Confidence 357899999999864 7899999999999997543 23568999999 99999999999999875 222222 22
Q ss_pred HHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhc--ccccccceeeeeec--C---ChhhHHHHHHHHHH--cCCCEEE
Q 009410 131 QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK--NSCMDYGFHMAITK--W---DEVVSDEMEVMVKE--KGINSFK 201 (535)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~--~g~~~ik 201 (535)
.+.++++||||++|+............+....... ..++++......+. . .....++++++.++ .+..++|
T Consensus 75 ~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 154 (379)
T 2ics_A 75 DEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGIVAQDELADLSKVQASLVKKAIQELPDFVVGIK 154 (379)
T ss_dssp HHHTGGGTEEEEEEESSSCTTTHHHHHHHHHTSSSEEEEEEESSTTTTSSSCTTSSGGGCCHHHHHHHHHHCTTTEEEEE
T ss_pred hhhHhhCceeEEEcCCCCCccCHHHHHHHHHhhcccEEEEccccccCCCCHHHHHHHHHHHHHHHHHHHHhhhCcceEEE
Confidence 46789999999999864323223233332222211 11222211111110 1 11124556665533 3677788
Q ss_pred EEeecCCCCcCCHHHHHHHHHHHHh-cCCeEEEEcCCh-hhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHH
Q 009410 202 FFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENG-DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (535)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (535)
.+..+......+.+.++++++.|++ .|+++.+|+... ....+..+.+ +.| ....|..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~~~~~~~~-~~g--~~~~H~~------------------ 213 (379)
T 2ics_A 155 ARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILALM-EKG--DVLTHCF------------------ 213 (379)
T ss_dssp EEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCHHHHHHHC-CTT--CEEESTT------------------
T ss_pred EeccccccccchHHHHHHHHHHHHHhcCCeEEEeCCCCcchHHHHHHHh-hcC--Ceeeecc------------------
Confidence 8766432334677889999999999 999999999642 2222222211 112 1111100
Q ss_pred HhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcC
Q 009410 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG 359 (535)
Q Consensus 280 ~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~G 359 (535)
.+.+.++.|.+.....+.+..+++.|+.+..++... ......+++++++|
T Consensus 214 --~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~p~~~----------------------------~~~~~~~~~~~~~G 263 (379)
T 2ics_A 214 --NGKENGILDQATDKIKDFAWQAYNKGVVFDIGHGTD----------------------------SFNFHVAETALREG 263 (379)
T ss_dssp --CCSTTSSEETTTTEECHHHHHHHHTTCEEECCCTTT----------------------------SCCHHHHHHHHHTT
T ss_pred --CCCccchhhccCHHHHHHHHHHHHcCCEEEecCCCC----------------------------CcCHHHHHHHHHcC
Confidence 011112233322222256667778887766543210 00225588899999
Q ss_pred -CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCC
Q 009410 360 -ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSD 438 (535)
Q Consensus 360 -v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ 438 (535)
++++++||+.+. . ... .+.. .+...+..+.+ .++|++++++++|.|||++||+++ +|+|++||+
T Consensus 264 ~~~~~l~TD~~~~--~-~~~--~~~~--------~~~~~l~~~~~-~~ls~~~~~~~~T~n~A~~lgl~~-~G~l~~G~~ 328 (379)
T 2ics_A 264 MKAASISTDIYIR--N-REN--GPVY--------DLATTMEKLRV-VGYDWPEIIEKVTKAPAENFHLTQ-KGTLEIGKD 328 (379)
T ss_dssp CCCSBCCCCBCHH--H-HHS--SSCC--------CHHHHHHHHHH-HTCCHHHHHHTTTHHHHHHTTCTT-SSSCCTTSB
T ss_pred CCcceEeccCccc--C-CCC--CcHh--------HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhCCCC-CcCCCCCCc
Confidence 889999996421 1 000 0111 22233333333 369999999999999999999965 899999999
Q ss_pred ccEEEEcCCCceeeecCCccccCCCCCCCCeeEee----EEEEEEECCEEEEECCe
Q 009410 439 ADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKG----KVEVTIAGGRVVWENDE 490 (535)
Q Consensus 439 ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~----~v~~v~~~Gr~V~~~~~ 490 (535)
|||||+|.+.++.. ++++.|..+.+ +|..||++|++||++|.
T Consensus 329 ADlvv~d~~~~~~~----------~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~ 374 (379)
T 2ics_A 329 ADLTIFTIQAEEKT----------LTDSNGLTRVAKEQIRPIKTIIGGQIYDNEGH 374 (379)
T ss_dssp CCEEEEEEEEEEEE----------EECTTSCEEEEEEEEEEEEEEETTEEEEC---
T ss_pred cCEEEEecccccce----------eecCCCCEEEeeeeeeeEEEEECCEEEecCCc
Confidence 99999987554322 45788888888 99999999999999985
No 41
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=100.00 E-value=8.8e-36 Score=307.32 Aligned_cols=368 Identities=17% Similarity=0.173 Sum_probs=224.7
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCC-CCceEEecCCCEEeecccccccccccccC-CC--------
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS-------- 121 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~-~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~-------- 121 (535)
+++++|+|++|++++ ..++|+|+||||++||+....+ .+.++||++|++|+|||||+|+|+..... +.
T Consensus 7 ~~~~li~n~~v~~~~--~~~~v~I~~g~I~~vg~~~~~~~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~~~ 84 (430)
T 1ra0_A 7 NALQTIINARLPGEE--GLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGT 84 (430)
T ss_dssp -CCCEEEEEBCTTCC--SEEEEEEETTEEEEEEEESSCCCCCTTEEECTTCEEESCEEEEEECTTTTTCTTSSSCCSSCC
T ss_pred CCcEEEEeeEecCCC--ceeEEEEECCEEEEeecCCCCCCCCcceEccCCCEecccccccccchhhhhhcCCCcCCCCCC
Confidence 467999999999976 6789999999999999865433 45789999999999999999999975421 11
Q ss_pred --------------CchhhhHHH----HHHHHhCCcEEEeccccCCCCChHHHHHHHHHHh--cccccccceeeeeec--
Q 009410 122 --------------ETIDDFFSG----QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA--KNSCMDYGFHMAITK-- 179 (535)
Q Consensus 122 --------------~~~~~~~~~----~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-- 179 (535)
.++++++.. ...++++||||++|+....... ...++...+.. .+..+.+.... ...
T Consensus 85 ~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 162 (430)
T 1ra0_A 85 LFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDAT-LTALKAMLEVKQEVAPWIDLQIVA-FPQEG 162 (430)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTT-CHHHHHHHHHHHHHTTTCEEEEEE-ECTTC
T ss_pred HHHHHHHhHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChH-HHHHHHHHHHHHhhhhhEEEEEEe-cCCcc
Confidence 122333332 3445799999999986432211 11222222111 12222222111 110
Q ss_pred --CChhhHHHHHHHHHHcCCCEEEEEeecCCCCc--CCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCCC
Q 009410 180 --WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM--INDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGIT 254 (535)
Q Consensus 180 --~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~--~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~~ 254 (535)
...+..+.++++. ..|.+.+... ...... .+.+.++++++.|+++|+++.+|+... ......++.
T Consensus 163 ~~~~~~~~~~~~~~~-~~g~~~~~~~--~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~------- 232 (430)
T 1ra0_A 163 ILSYPNGEALLEEAL-RLGADVVGAI--PHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVET------- 232 (430)
T ss_dssp SSSSTTHHHHHHHHH-HTTCSEECCC--GGGSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCTTCCHHHH-------
T ss_pred cccCchHHHHHHHHH-HhCCCeEeee--ecccccccccHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHH-------
Confidence 1223344466655 4555554332 222232 678899999999999999999999543 211111110
Q ss_pred CcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHH------HHHHHHHHcCCcEEeccccceEeeCcccccC
Q 009410 255 GPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAM------EEIAKARKAGQRVIGEPVVSGLVLDDSWLWH 328 (535)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~------~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~ 328 (535)
.+..+.+.+ . +.++++.|+...+.. +.++++++.|+.++.||..+..+... .
T Consensus 233 ----------------~~~~~~~~g-~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~~~p~~~~~~~~~--~-- 290 (430)
T 1ra0_A 233 ----------------VAALAHHEG-M-GARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGR--F-- 290 (430)
T ss_dssp ----------------HHHHHHHHT-C-GGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEEECHHHHHHHTTT--T--
T ss_pred ----------------HHHHHHHhC-C-CCCEEEEeccccccCChHhHHHHHHHHHHcCCEEEECchhhhhhccc--c--
Confidence 011111221 1 456789998876542 38899999999988877532211100 0
Q ss_pred cCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCC
Q 009410 329 SDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQIS 408 (535)
Q Consensus 329 ~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls 408 (535)
...|+.+.. ..+++++++|+++++|||+.+.+..... ..+++. +..+...+..+ ..++|
T Consensus 291 ---------~~~p~~~~~---~~~~~~~~~Gv~~~lgTD~~~~~~~~~~-~~~~~~------~~~~~~~~~~~--~~~~~ 349 (430)
T 1ra0_A 291 ---------DTYPKRRGI---TRVKEMLESGINVCFGHDGVFDPWYPLG-TANMLQ------VLHMGLHVCQL--MGYGQ 349 (430)
T ss_dssp ---------CCSSCCCCC---CCHHHHHHTTCCEEECCBCSSBTTBSCC-CCCHHH------HHHHHHHHTTC--CSHHH
T ss_pred ---------CCCCCcCCC---CCHHHHHHCCCEEEEeCCCCcccCCCCC-CCCHHH------HHHHHHHHHcc--CCccc
Confidence 001221111 2378899999999999998631110000 000111 11221111100 12358
Q ss_pred HHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC
Q 009410 409 VTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 409 ~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~ 488 (535)
++++|+++|.|||+++|+++ |+|++||.|||||+|.++++.. +. ...+|..||++|++||++
T Consensus 350 ~~~al~~~T~~~A~~lg~~~--G~i~~G~~ADlvv~d~~~~~~~----~~------------~~~~v~~v~~~G~~v~~~ 411 (430)
T 1ra0_A 350 INDGLNLITHHSARTLNLQD--YGIAAGNSANLIILPAENGFDA----LR------------RQVPVRYSVRGGKVIAST 411 (430)
T ss_dssp HHGGGGGGTHHHHHHTTCSS--CSSCTTSBCCEEEESSSSHHHH----HH------------HTCCCSEEEETTEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCC--cccCCCCcCCEEEEcCCChhHH----Hh------------ccCcceEEEECCEEEecC
Confidence 99999999999999999964 9999999999999998765411 00 135799999999999999
Q ss_pred Ceeccc
Q 009410 489 DELNVV 494 (535)
Q Consensus 489 ~~~~~~ 494 (535)
++++..
T Consensus 412 ~~~~~~ 417 (430)
T 1ra0_A 412 QPAQTT 417 (430)
T ss_dssp CCCCEE
T ss_pred Ccceee
Confidence 988743
No 42
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=100.00 E-value=2.2e-34 Score=292.66 Aligned_cols=351 Identities=17% Similarity=0.154 Sum_probs=220.4
Q ss_pred ccEEEEccEE-EcCCC----ceeeeEEEeCCEEEEeeCCCC-CCCC-ceEEecCCCEEeecccccccccccccCCCCchh
Q 009410 53 SKILIKGGTV-VNAHH----QQIADVYVEDGIVVAVQPNIN-VGDD-VKVLDATGKFVMPGGIDPHTHLAMEFMGSETID 125 (535)
Q Consensus 53 ~~~vi~n~~v-i~~~~----~~~~~I~I~~G~I~~Vg~~~~-~~~~-~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~ 125 (535)
.+++|+|++| +++++ .++++|+|+||+|++|++... .+.+ .++||++|++|+|||||+|+|+... +.....
T Consensus 2 ~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~~ 79 (386)
T 2vun_A 2 SKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMKDAGDATIIDAAGSTVTPGLLDTHVHVSGG--DYAPRQ 79 (386)
T ss_dssp CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGTTCTTCEEEECTTCEEEECEEEEEECCCST--TEEGGG
T ss_pred ccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccCCCCCceEEcCCCCEEccceeeccccccCC--CcChhH
Confidence 4689999999 99864 257899999999999997322 1334 6899999999999999999999743 211000
Q ss_pred hhHHHHHHHHhCCcEEEecccc---CCCCChHHHHH------HHHHHhcccccccceeeeee-cCChhhHHHHHHHHHHc
Q 009410 126 DFFSGQAAALAGGTTMHIDFVI---PINGSLTAGFE------AYEKKAKNSCMDYGFHMAIT-KWDEVVSDEMEVMVKEK 195 (535)
Q Consensus 126 ~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 195 (535)
........++++||||++|+.. +........++ .....+.+ .....+..+.. .......++++++. +.
T Consensus 80 ~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~-~~ 157 (386)
T 2vun_A 80 KTMDFISSALHGGVTTMISAGSPHFPGRPKDAAGTKALAITLSKSYYNAR-PAGVKVHGGAVILEKGLTEEDFIEMK-KE 157 (386)
T ss_dssp TEESHHHHHHTTTEEEEEECCCTTSTTCCCSHHHHHHHHHHHHHHHHHCC-GGGCEEECCEECCCTTCCHHHHHHHH-HT
T ss_pred HHHHHHHHHHhCCceEEEeccccccCCChhhHHHHHHHHHHhhccccccc-ccceeeccCcccccCCcCHHHHHHHH-Hh
Confidence 1112578889999999999862 11111111222 11111111 00011111110 11111235666666 56
Q ss_pred CCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHH
Q 009410 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 275 (535)
|.+.+|++... ...+++.++++++.|+++|+++.+|+.+..... .+. +.+..+
T Consensus 158 g~~~ik~~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~--------~~~----------------~~i~~~ 210 (386)
T 2vun_A 158 GVWIVGEVGLG---TIKNPEDAAPMVEWAHKHGFKVQMHTGGTSIPG--------SST----------------VTADDV 210 (386)
T ss_dssp TCCEEEEETSS---SCCSHHHHHHHHHHHHHTTCEEEEECSCCSCST--------TCS----------------CCHHHH
T ss_pred CCCeEEEeecC---CCCCHHHHHHHHHHHHHCCCeEEEecCCccccc--------cCH----------------HHHHHH
Confidence 88999987421 235899999999999999999999996321000 000 011122
Q ss_pred HHHHHhcCCCEEEEEccC----HHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHH
Q 009410 276 IRLAEFVNTPLYVVHVMS----MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (535)
Q Consensus 276 ~~~~~~~~~~~~~~H~~~----~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~ 351 (535)
+ +.+.+ .+.|+.. .+. +.++.+++.|+.+..++. +. . .......
T Consensus 211 ~----~~G~~-~i~H~~~~~~~~~~-~~~~~~~~~g~~vl~~~~------~g------------------~--~~~~~~~ 258 (386)
T 2vun_A 211 I----KTKPD-VVSHINGGPTAISV-QEVDRIMDETDFAMEIVQ------CG------------------N--PKIADYV 258 (386)
T ss_dssp H----HHCCS-EEETTTCSSSCCCH-HHHHHHHHHCCCEEEEES------SS------------------C--HHHHHHH
T ss_pred H----HcCCC-EEEEccCCCCCCCH-HHHHHHHHcCCeEEEecc------CC------------------c--ccccHHH
Confidence 2 23444 4789876 444 778888888987621110 00 0 1123366
Q ss_pred HHHHHhcCC--eEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCC
Q 009410 352 LQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPR 429 (535)
Q Consensus 352 ~~~~l~~Gv--~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~ 429 (535)
++.++++|+ +++++||+. .... ..|.| .+...++.+. ..++|++++++++|.|||++||+ +
T Consensus 259 ~~~~~~~g~~d~v~lgTD~p-~~~~----------~~~~g---~~~~~~~~~~-~~~ls~~~~~~~~T~n~A~~lgl--~ 321 (386)
T 2vun_A 259 ARRAAEKGQLGRVIFGNDAP-SGTG----------LIPLG---ILRNMCQIAS-MSDIDPEVAVCMATGNSTAVYGL--N 321 (386)
T ss_dssp HHHHHHHTCGGGEEEECCBS-BTTB----------BCTTH---HHHHHHHHHH-HSCCCHHHHHHHHTHHHHHHHTC--S
T ss_pred HHHHHHcCCCceeEEecCCC-CCCC----------CCcch---hHHHHHHHHh-hcCCCHHHHHHHHhHHHHHHcCC--C
Confidence 899999999 999999973 1110 01111 1112222222 35799999999999999999999 5
Q ss_pred CccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeE--eeEEEEEEECCEEEEECCeecc
Q 009410 430 KGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV--KGKVEVTIAGGRVVWENDELNV 493 (535)
Q Consensus 430 ~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~--~~~v~~v~~~Gr~V~~~~~~~~ 493 (535)
+|+|++||.|||||+|.++. ....+ ++.+... ..+|+.||++|++|+++|+...
T Consensus 322 ~G~i~~G~~ADlvv~d~~~~-~~~~~---------~~~~~~~~~~~~v~~v~v~G~~v~~~~~~~~ 377 (386)
T 2vun_A 322 TGVIAPGKEADLIIMDTPLG-SVAED---------AMGAIAAGDIPGISVVLIDGEAVVTKSRNTP 377 (386)
T ss_dssp CSSCSTTSBCCEEEEECBTT-CSCSS---------HHHHHHHTCCCEEEEEEETTEEEESSCSSSC
T ss_pred ceeeCCCCeeCEEEECCCcc-cccch---------hHHHhhccCCCceeEEEECCEEEeecCcCCC
Confidence 89999999999999998763 21111 2221110 2489999999999999988666
No 43
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=100.00 E-value=1.4e-36 Score=310.99 Aligned_cols=354 Identities=18% Similarity=0.221 Sum_probs=216.5
Q ss_pred EEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-C--C--------
Q 009410 55 ILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G--S-------- 121 (535)
Q Consensus 55 ~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g--~-------- 121 (535)
++|+|++|+++++ ..+++|+|+||||++|++.. ++.+ ||++|++|+|||||+|+|+..... + .
T Consensus 1 ~li~n~~v~~~~~~~~~~~~v~I~~g~I~~vg~~~---~~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~ 76 (406)
T 1p1m_A 1 MIIGNCLILKDFSSEPFWGAVEIENGTIKRVLQGE---VKVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAEDLSFEEWL 76 (406)
T ss_dssp CEEEEEEECCSTTSCCEEEEEEEETTEEEEEEESS---CCCS-EECTTEEEEECEEEEEECGGGGGGTTSSCSCCHHHHH
T ss_pred CEEEccEEEecCccccccceEEEECCEEEEeeCCC---Ccce-ecCCCcEEeecccchhhccchhhhccccCCCCHHHHH
Confidence 4799999998764 46899999999999999764 2456 999999999999999999976421 1 0
Q ss_pred ----------CchhhhHHHH----HHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChhhHHH
Q 009410 122 ----------ETIDDFFSGQ----AAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDE 187 (535)
Q Consensus 122 ----------~~~~~~~~~~----~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
.+++.+.... ..++++||||++|+... ....++.....+.+.....++.. ......+..++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~g~r~~~~~~~~~-~~~~~~~~~~~ 151 (406)
T 1p1m_A 77 FSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYFH----EEWIAKAVRDFGMRALLTRGLVD-SNGDDGGRLEE 151 (406)
T ss_dssp HTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEESS----HHHHHHHHHHHCCEEEEEEEECC-BTTBCTTHHHH
T ss_pred HhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhC----HHHHHHHHHHcCCEEEEEccccc-CCCCHHHHHHH
Confidence 1334443322 45689999999998532 23334443333333222111110 11112233333
Q ss_pred HHHHHHH-cCC-CEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcC-ChhhHHHHHHHHHHcCCCCcccccccCC
Q 009410 188 MEVMVKE-KGI-NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQKRMIELGITGPEGHALSRP 264 (535)
Q Consensus 188 ~~~~~~~-~g~-~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (535)
.....+. .+. +.+|+...+......+.+.+.++++.|++.|+++++|+. .........+.+ ..|.
T Consensus 152 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~-~~g~----------- 219 (406)
T 1p1m_A 152 NLKLYNEWNGFEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDIL-NIGL----------- 219 (406)
T ss_dssp HHHHHHHHTTGGGTEEEEEEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHHH-TTTT-----------
T ss_pred HHHHHHHhhCCCCcEEEEEecCccCcCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHHHhh-hCCH-----------
Confidence 3333322 222 457776666666677899999999999999999999996 322221111100 0010
Q ss_pred hhhHHHHHHHHHHHHHhcCCC-EEEEEcc---CHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEc
Q 009410 265 PLLEGEATTRAIRLAEFVNTP-LYVVHVM---SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMS 340 (535)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~-~~~~H~~---~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (535)
+..+.. ..+.|+. ..+. +.++.++ ..+|.. ++..+..
T Consensus 220 ---------------~~~g~~~~~~~H~~~~~~~~~-~~~~~~~------~~~p~~-------------~~~~~~~---- 260 (406)
T 1p1m_A 220 ---------------KEVKTIAAHCVHLPERYFGVL-KDIPFFV------SHNPAS-------------NLKLGNG---- 260 (406)
T ss_dssp ---------------TTSCEEEEECTTCCGGGTTTT-TTSSEEE------EECHHH-------------HHHTTCC----
T ss_pred ---------------hHcCcceeEeeeccCcccCCH-HHHHHHH------HhCcHH-------------HhhcCCC----
Confidence 001110 2345555 3332 2222111 222211 0111110
Q ss_pred CCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHH
Q 009410 341 PPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTEC 420 (535)
Q Consensus 341 p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~ 420 (535)
..++++++++|+++++|||+.+.....+ +|. +..+...+.+.+...++|++++++++|.||
T Consensus 261 --------~~~~~~~~~~Gv~~~lgtD~~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~ls~~~al~~~T~~~ 321 (406)
T 1p1m_A 261 --------IAPVQRMIEHGMKVTLGTDGAASNNSLN-----LFF------EMRLASLLQKAQNPRNLDVNTCLKMVTYDG 321 (406)
T ss_dssp --------CCCHHHHHHTTCEEEECCCCTTTTSCCC-----HHH------HHHHHHHHHHTTCTTSSCHHHHHHHHTHHH
T ss_pred --------cCcHHHHHhCCCeEEEECCCCcCCCCCC-----HHH------HHHHHHHHhcccCCCCCCHHHHHHHHHHHH
Confidence 1238899999999999999876432211 111 233333333333255799999999999999
Q ss_pred HHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccC
Q 009410 421 ARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 421 A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
|+++|++ + |+|++||.|||||+|.++++.++.+++.+...+.+. ..+|..||++|++|| +|+++..+
T Consensus 322 A~~lgl~-~-G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~v~G~~v~-~g~~~~~d 388 (406)
T 1p1m_A 322 AQAMGFK-S-GKIEEGWNADLVVIDLDLPEMFPVQNIKNHLVHAFS-----GEVFATMVAGKWIYF-DGEYPTID 388 (406)
T ss_dssp HHHHTCS-C-SSCCTTSBCCEEEEECCSGGGCSGGGHHHHHHHTCC-----SCCSEEEETTEEEEE-TTBCTTSC
T ss_pred HHHhCCC-C-cccCCCCcccEEEEeCCccccCCccChHHHheEecC-----CCCceEEEECCEEEE-CCeeCCCC
Confidence 9999995 4 999999999999999987766553332221111111 358999999999999 99998865
No 44
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=100.00 E-value=2.7e-35 Score=309.66 Aligned_cols=362 Identities=16% Similarity=0.190 Sum_probs=229.7
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCC------------CCCCceEEecCCCEEeecccccccccccccC
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNIN------------VGDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~------------~~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 119 (535)
..+++|+|++|+|+.+..+++|+|+||||++|++... .+.+.++||++|++|+|||||+|+|+..+
T Consensus 65 ~~dllI~n~~Vid~~gi~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl~~p-- 142 (569)
T 1e9y_B 65 ELDLIITNALIVDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISP-- 142 (569)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEETTCT--
T ss_pred cCCEEEEeeEEECCCCcEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecCCCc--
Confidence 4689999999999766668999999999999997532 13457899999999999999999998754
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCC-C-------ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPIN-G-------SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (535)
+ ...+++++||||++|++.... . .....++...+......++++++... .....+.++++
T Consensus 143 ~---------~~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~~a~~~~~~~~~~~g~g---~~~~~~~l~e~ 210 (569)
T 1e9y_B 143 Q---------QIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKG---NASNDASLADQ 210 (569)
T ss_dssp T---------HHHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEEC---CCSCHHHHHHH
T ss_pred H---------HHHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHHHHhcccCceEEEECCC---CcCCHHHHHHH
Confidence 1 157889999999999854221 0 11334554555444444555544321 11234566666
Q ss_pred HHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHH
Q 009410 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (535)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (535)
. +.|+.++|++..+ ..+++.++++++.|+++|+++.+|+++......
T Consensus 211 ~-~~Ga~gik~~~~~----~~t~e~l~~~l~~A~~~g~~V~iHa~~~~e~g~---------------------------- 257 (569)
T 1e9y_B 211 I-EAGAIGFKIHEDW----GTTPSAINHALDVADKYDVQVAIHTDTLNEAGC---------------------------- 257 (569)
T ss_dssp H-HTTCSEEEECGGG----CCCHHHHHHHHHHHHHTTCEEEECCCTTCSSCC----------------------------
T ss_pred H-HcCCCEEEecCCC----CCCHHHHHHHHHHHHHhCCEEEEEcCCcccchH----------------------------
Confidence 6 5789999987543 368999999999999999999999975321000
Q ss_pred HHHHHHHHHhcCCCEEEEEccCHHH---HHHHHHHHHcCCcEEeccccceEeeCcccccCcCcccc-ceeEEcCCC----
Q 009410 272 TTRAIRLAEFVNTPLYVVHVMSMDA---MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA-AKYVMSPPI---- 343 (535)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~H~~~~~~---~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~---- 343 (535)
+... ++...+.++|+.|+..... .+.++.+++.|+..+. ++.++.+..+..... +..- ......++.
T Consensus 258 ~~~~--la~~~g~~~hi~H~~~~~~~~~~d~I~~~~~~gv~~~~--~~ptl~~t~~~~~~~-~d~~~v~h~l~~~~~ed~ 332 (569)
T 1e9y_B 258 VEDT--MAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPAS--TNPTIPFTVNTEAEH-MDMLMVCHHKDKSIKEDV 332 (569)
T ss_dssp HHHH--HHHHTTCCEEETTTTSTTSCSTTTGGGGGGSTTEEEEE--CGGGCSCBTTHHHHH-HHHHHHTTTCCSSCHHHH
T ss_pred HHHH--HHHHcCCCEEEEEcccCcccccHHHHHHHHHcCCeeEe--eCCccccccchhhhh-hchhhhhhhcCcccHHHH
Confidence 0001 1233577889999987542 3678888877752221 111121111111000 0000 000001111
Q ss_pred -----CCcccHHHHHHHHh-cCCeEEEeCCCCCCChhh-hhcCCCCcccCcchHHHHHHHHHHHH----HhcCCCCHHHH
Q 009410 344 -----RASGHNKALQAALA-TGILQLVGTDHCAFNSTQ-KAFGIDDFRKIPNGIEERMHLVWDTM----VESGQISVTDY 412 (535)
Q Consensus 344 -----r~~~~~~~~~~~l~-~Gv~~~lgtD~~~~~~~~-~~~~~~~~~~~~~g~~~~l~~~~~~~----~~~~~ls~~ea 412 (535)
+...+..++++.+. +|+++++|||+.+.+... ... ++| .....+......+ ....++++.++
T Consensus 333 ~~~~~rlr~~~~a~~~~L~d~Gv~v~iGSD~~~~~~~g~~~~--~~~-----~~~~~~~~~~G~l~~~~~~~~~ls~~~a 405 (569)
T 1e9y_B 333 QFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGRVGEVIT--RTW-----QTADKNKKEFGRLKEEKGDNDNFRIKRY 405 (569)
T ss_dssp HHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCCTTSHHH--HHH-----HHHHHHHHHHCSCSSCCSSSCHHHHHHH
T ss_pred HHhhcchhhhHHHHHHHHHhCCCEEEEeCCCCccCccccccc--chh-----hHHHHhHhhccCcchhhccccCCCHHHH
Confidence 11123455555555 799999999987654310 000 000 0001111000000 02456899999
Q ss_pred HHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC-Cee
Q 009410 413 VRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN-DEL 491 (535)
Q Consensus 413 l~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~-~~~ 491 (535)
|+++|.|||+++|+++++|+|++||.|||||||.+++ ..++..||++|++||.+ |+.
T Consensus 406 l~~~T~npA~~lGl~~~~GsIe~Gk~ADlvv~d~~~~----------------------~~~v~~v~~~G~iv~~~~g~~ 463 (569)
T 1e9y_B 406 LSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFF----------------------GVKPNMIIKGGFIALSQMGDA 463 (569)
T ss_dssp HGGGTHHHHHHTTCTTTSSSSCTTSBCCEEEECTTTT----------------------TTCCSEEEETTEEEEEEECCT
T ss_pred HHHHhHHHHHHcCCCCCccCcCCCCCCCEEEECchhc----------------------CCCccEEEECCEEEEcCCCCc
Confidence 9999999999999987899999999999999998742 13788999999999987 654
Q ss_pred ccc
Q 009410 492 NVV 494 (535)
Q Consensus 492 ~~~ 494 (535)
...
T Consensus 464 ~~~ 466 (569)
T 1e9y_B 464 NAS 466 (569)
T ss_dssp TSS
T ss_pred ccC
Confidence 443
No 45
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=100.00 E-value=4.1e-34 Score=293.89 Aligned_cols=342 Identities=17% Similarity=0.151 Sum_probs=211.9
Q ss_pred cccEEEEccEEEcCCC-----c--eeeeEEEeCCEEEEeeCCCCCCC----CceEEecCCCEEeecccccccccccccCC
Q 009410 52 SSKILIKGGTVVNAHH-----Q--QIADVYVEDGIVVAVQPNINVGD----DVKVLDATGKFVMPGGIDPHTHLAMEFMG 120 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~-----~--~~~~I~I~~G~I~~Vg~~~~~~~----~~~vID~~G~~vlPGlID~H~H~~~~~~g 120 (535)
+.+++|+|++|+|+++ . ++++|+|+||||++||+....+. +.++||++|++|+|||||+|+|+... +
T Consensus 14 ~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~--~ 91 (419)
T 2puz_A 14 NATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFG--G 91 (419)
T ss_dssp -CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEEECEEECCCCCCCS--S
T ss_pred CCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhccCCCeEEeCCCCEeCcCceecccCccch--h
Confidence 4679999999999765 2 57899999999999998654332 25899999999999999999998653 1
Q ss_pred C---------------------------------CchhhhH----HHHHHHHhCCcEEEeccccCCCC--ChHHHHHHHH
Q 009410 121 S---------------------------------ETIDDFF----SGQAAALAGGTTMHIDFVIPING--SLTAGFEAYE 161 (535)
Q Consensus 121 ~---------------------------------~~~~~~~----~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~ 161 (535)
. .+++... .....++++|||++.++...... .....++...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~ 171 (419)
T 2puz_A 92 NRAMEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLRVAR 171 (419)
T ss_dssp CCHHHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSCCSHHHHHHHHHHHH
T ss_pred hhHHHHHHHhcCCCHHHHHhcCCCeecchhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCCCCCchhHHHHHHHHH
Confidence 1 0112222 22356788999999985322211 1223334433
Q ss_pred HHhcccccccc-----eeeeeecC---ChhhHH-----HHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcC
Q 009410 162 KKAKNSCMDYG-----FHMAITKW---DEVVSD-----EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLG 228 (535)
Q Consensus 162 ~~~~~~~~~~~-----~~~~~~~~---~~~~~~-----~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g 228 (535)
+.......... .+...... ..+..+ .+..+......+.++.+. +....+.+.++++++.|+++|
T Consensus 172 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~g 248 (419)
T 2puz_A 172 RLETLRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAHAEGLADAVDGFC---EGIAFSVKEIDRVFAAAQQRG 248 (419)
T ss_dssp HHTTTSSCEEEEEECCTTCCCGGGTTCHHHHHHHTHHHHHHHHHHTTCCSEECCEE---STTSBCHHHHHHHHHHHHHTT
T ss_pred HHhhhcCceEEEEecccccCchhhcccHHHHHHHHHhhhhhhhhhccccccccccc---CCCCcCHHHHHHHHHHHHHCC
Confidence 33322111111 01000000 011111 111222112244444332 123457899999999999999
Q ss_pred CeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCC
Q 009410 229 ALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQ 308 (535)
Q Consensus 229 ~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~ 308 (535)
+++.+|+...... ...+ .+...+. ..+.|+...+. +.++++++.|+
T Consensus 249 ~~v~~H~~~~~~~-~~~~-------------------------------~~~~~g~-~~~~H~~~~~~-~~~~~~~~~g~ 294 (419)
T 2puz_A 249 LPVKLHAEQLSNL-GGAE-------------------------------LAASYNA-LSADHLEYLDE-TGAKALAKAGT 294 (419)
T ss_dssp CCBEEEESSSSCC-SHHH-------------------------------HHHHTTC-SEEEECTTCCH-HHHHHHHHHTC
T ss_pred CcEEEEecccccC-CHHH-------------------------------HHHhcCC-ceehHhccCCH-HHHHHHHHcCC
Confidence 9999998543110 0011 1112232 24779988876 88899999998
Q ss_pred cEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcc
Q 009410 309 RVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN 388 (535)
Q Consensus 309 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~ 388 (535)
.++.+|...+. ++ +.. . .+++.++++|+++++|||+.+.... ..
T Consensus 295 ~~~~~p~~~~~-----------l~-~~~---~---------~~~~~~~~~Gv~~~lgsD~~~~~~~--------~~---- 338 (419)
T 2puz_A 295 VAVLLPGAFYA-----------LR-EKQ---L---------PPVQALRDAGAEIALATDCNPGTSP--------LT---- 338 (419)
T ss_dssp EEEECHHHHHH-----------HT-CCC---C---------CCHHHHHHHTCCEEECCCCCSSSCC--------BC----
T ss_pred cEEECCchhhh-----------hc-ccc---c---------ccHHHHHHCCCeEEEECCCCCCCCc--------cc----
Confidence 88777653110 00 000 1 1278889999999999997553211 10
Q ss_pred hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCC
Q 009410 389 GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEG 468 (535)
Q Consensus 389 g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~ 468 (535)
.+...+. .++...++|++++|+++|.|||+++|+++++|+|++||+|||||+|.|++..+... +.
T Consensus 339 ~l~~~~~----~~~~~~~ls~~~al~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~~~~~~~~~~-~~---------- 403 (419)
T 2puz_A 339 SLLLTMN----MGATLFRMTVEECLTATTRNAAKALGLLAETGTLEAGKSADFAIWDIERPAELVYR-IG---------- 403 (419)
T ss_dssp CHHHHHH----HHHHHHCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECCSSTTHHHHC-BS----------
T ss_pred cHHHHHH----HhccccCCCHHHHHHHHHHHHHHHcCCCCCccccCCCCcCCEEEECCCchhcchhh-hc----------
Confidence 1111222 22334579999999999999999999988899999999999999998865433210 00
Q ss_pred eeEeeEEEEEEECCEEEE
Q 009410 469 RRVKGKVEVTIAGGRVVW 486 (535)
Q Consensus 469 ~~~~~~v~~v~~~Gr~V~ 486 (535)
..+|..||++|++|.
T Consensus 404 ---~~~v~~v~v~G~~v~ 418 (419)
T 2puz_A 404 ---FNPLHARIFKGQKVS 418 (419)
T ss_dssp ---CCCEEEEEETTEECC
T ss_pred ---CCceEEEEECCEEcC
Confidence 137999999999874
No 46
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=2e-34 Score=299.67 Aligned_cols=365 Identities=14% Similarity=0.023 Sum_probs=231.6
Q ss_pred ccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-CC----------
Q 009410 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS---------- 121 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g~---------- 121 (535)
++++++|+.+.+ ...++++|+|+||||++|++... .++||++|++|+|||||+|+|+.+... |.
T Consensus 12 ~~l~~~~~~~~~-~~~~~~~v~I~~g~I~~Ig~~~~----~~~iD~~g~~v~PGlID~H~H~~~~~~rg~~~~~~~~~~~ 86 (458)
T 4f0l_A 12 HFIHARQALLPD-GWAENVRIGIAGGVICSIETGVL----AGPDDERQSVVVAGMANLHSHAFQYGMAGLAERRGPSADS 86 (458)
T ss_dssp EEEEEEEEEETT-EEEEEEEEEEETTEEEEEECSCC----CCTTCEEEEEEEECEEEEEECGGGGGGTTSSCBCCSCSST
T ss_pred hHhhhcceeccC-ccccCceEEEECCEEEEEeCCCc----cccccCCCCEEccCceecccchhhhhhcccccccccCCCc
Confidence 457788877632 22478999999999999998653 356999999999999999999964411 10
Q ss_pred --------------CchhhhHH----HHHHHHhCCcEEEeccccCCC-------CC----hHHHHHHHHHHhcccccccc
Q 009410 122 --------------ETIDDFFS----GQAAALAGGTTMHIDFVIPIN-------GS----LTAGFEAYEKKAKNSCMDYG 172 (535)
Q Consensus 122 --------------~~~~~~~~----~~~~~l~~GvTtv~d~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~ 172 (535)
.++++++. ....++++||||+.|+..... .. ....++...+.+.+..+...
T Consensus 87 ~~~w~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~g~r~~~~~~ 166 (458)
T 4f0l_A 87 FWSWREIMYKFALTMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAATTAGMGLTLLPV 166 (458)
T ss_dssp THHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHHHHHcCCeEEEecc
Confidence 02222322 233467899999999743211 01 23444445554544332211
Q ss_pred eee-----eeec---------CChhhHHHHHHHHHH-cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcC-
Q 009410 173 FHM-----AITK---------WDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE- 236 (535)
Q Consensus 173 ~~~-----~~~~---------~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~- 236 (535)
+.. .... ..++..+.+..+.+. .+...+.+.+.+++....+++.++++++.|+ |+++++|+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~--g~~v~~H~~e 244 (458)
T 4f0l_A 167 FYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEGFEGAVLGVAPHSLRAVTPDELDSVTQLLP--DAPVHIHVAE 244 (458)
T ss_dssp ECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTTCTTCEECBEECBTTTSCHHHHHHHTTSST--TSCEEEEESC
T ss_pred hhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhccCCceEEEEecCCcCcCCHHHHHHHHHHhc--CCCEEEEeCC
Confidence 111 0110 111222333333321 2334455555666677889999999999998 999999985
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEecccc
Q 009410 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (535)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~ 316 (535)
.........+. .|.. .+..+.+ ....+.++.+.|+...+. ++++.+++.|+.++.||..
T Consensus 245 ~~~~~~~~~~~---~g~~----------------~~~~l~~-~g~l~~~~~~~H~~~~~~-~~~~~l~~~g~~~~~~p~s 303 (458)
T 4f0l_A 245 QVKEVEDCIAW---SGKR----------------PVEWLLD-HQDVTARWCLIHATHMSD-EETKHMAKAGAIAGLCPVT 303 (458)
T ss_dssp SHHHHHHHHHH---HSSC----------------HHHHHHH-HSCCCTTEEEEECCSCCH-HHHHHHHHHTCEEEECHHH
T ss_pred CHHHHHHHHHH---hCCC----------------HHHHHHH-cCCCCCCeEEEEeccCCH-HHHHHHHHcCCeEEECccc
Confidence 44443333322 1211 1111222 223567888999998876 8899999999999988864
Q ss_pred ceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHH
Q 009410 317 SGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHL 396 (535)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~ 396 (535)
. +..+... .++++++++|+++++|||..+.. + +|. +++...
T Consensus 304 ~-------------~~l~~~~------------~~~~~~~~~Gv~v~lgtD~~~~~-~-------~~~------~~~~~~ 344 (458)
T 4f0l_A 304 E-------------ANLGDGT------------FNATEFAAAGGKFGIGSDSNVLI-G-------IGD------ELRQLE 344 (458)
T ss_dssp H-------------HHTTCCC------------CCHHHHHHTTCEEEECCBTTSSC-C-------HHH------HHHHHH
T ss_pred c-------------ccccCCC------------ccHHHHHHCCCeEEEECCCCCCC-C-------HHH------HHHHHH
Confidence 2 1121211 12889999999999999953211 1 111 223333
Q ss_pred HHHHHHh--------cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCC
Q 009410 397 VWDTMVE--------SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEG 468 (535)
Q Consensus 397 ~~~~~~~--------~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~ 468 (535)
...+... ..+++++++|+++|.|||+++|+ ++|+|++||.|||||+|.++++..+.+++.+ ..+|.+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A~~lg~--~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~---~~~~~~ 419 (458)
T 4f0l_A 345 YSQRLYHRARNVLAANEGSTGRALFDGAVLGGNIAMGR--PEDGLKKGASADFVSLDVERLPHAKGDVVLD---GWIFAG 419 (458)
T ss_dssp HHHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHHHHTTC--TTCSSSTTSBCCEEEEECTTSTTCCHHHHHH---HHHHTS
T ss_pred HHHhhhccCccccCCcccCCHHHHHHHHHHHHHHHhCC--CCCcCCCCCcCCEEEEeCCCCccCCcccHHH---hCeEcC
Confidence 3333322 23599999999999999999999 4899999999999999998776544322222 223333
Q ss_pred eeEeeEEEEEEECCEEEEECCeec
Q 009410 469 RRVKGKVEVTIAGGRVVWENDELN 492 (535)
Q Consensus 469 ~~~~~~v~~v~~~Gr~V~~~~~~~ 492 (535)
. . +|..||++|++||++|+++
T Consensus 420 ~--~-~v~~v~v~G~~v~~~g~~~ 440 (458)
T 4f0l_A 420 R--A-HVCDVWVRGVKQVEGGRHR 440 (458)
T ss_dssp C--C-EEEEEEETTEEEEETTEET
T ss_pred C--C-CceEEEECCEEEEECCEeC
Confidence 3 3 8999999999999999974
No 47
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=100.00 E-value=2.6e-35 Score=302.78 Aligned_cols=371 Identities=16% Similarity=0.084 Sum_probs=229.7
Q ss_pred EEEEccEEEcCCCc-eeeeEEEeCCEEEEeeCCCCC---CCCceEEecCCCEEeecccccccccccccCC-CC-------
Q 009410 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-SE------- 122 (535)
Q Consensus 55 ~vi~n~~vi~~~~~-~~~~I~I~~G~I~~Vg~~~~~---~~~~~vID~~G~~vlPGlID~H~H~~~~~~g-~~------- 122 (535)
++|+|++|+++++. ++++|+| ||+|++||+.... .++.++||++|++|+|||||+|+|+.+.... ..
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i-~g~I~~Vg~~~~~~~~~~~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~~~l~~ 80 (427)
T 3v7p_A 2 RIIKPFAILTPQTIIQDKAVAF-DKKIEAIDTVENLIKKYPNAAVEHDENSLLLPGFANPHLHLEFSANKATLQYGDFIP 80 (427)
T ss_dssp EEEEEEEEECSSSEEESCEEEE-SSBEEEEECHHHHHHHCTTSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCCSSHHH
T ss_pred EEEECCEEEcCCCEEeCcEEEE-CCEEEEecChhhhccccCCceEEeCCCCEEecCEeecccCcchhhcccccccCCHHH
Confidence 68999999998864 6899999 9999999985432 2457899999999999999999999765211 00
Q ss_pred ------------chhhh----HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChhhHH
Q 009410 123 ------------TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (535)
Q Consensus 123 ------------~~~~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (535)
++++. ......++++||||+.|+...... ++...+.+.+..+.............+..+
T Consensus 81 wl~~~~~~~~~~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~-----~~a~~~~Gir~~~~~~~~~~~~~~~~~~~~ 155 (427)
T 3v7p_A 81 WLYSVIRHREDLLPLCDGACLEQTLSSIIQTGTTAIGAISSYGED-----LQACIDSALKVVYFNEVIGSNAATADVMYA 155 (427)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTEEEEEEEESSSTT-----HHHHHHBSSEEEEEEEECBCCGGGHHHHHH
T ss_pred HHHHHHHhHHhcCHHHHHHHHHHHHHHHHHhCCEEEEEecCcHHH-----HHHHHhcCCeEEEeccccCCChhhhhHHHH
Confidence 11111 123345788999999998654221 344444443322211111100001111112
Q ss_pred HHHHHHH---HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHH-------HHHHcCCCC
Q 009410 187 EMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQK-------RMIELGITG 255 (535)
Q Consensus 187 ~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~-------~~~~~g~~~ 255 (535)
+..+..+ ......++..+..++.+.++++.++++++.|+++|+++++|+.+. .......+ .+...|...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~~~~~~~~~~~~ 235 (427)
T 3v7p_A 156 SFLERFHQSKKHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFAKFFKEFLNQT 235 (427)
T ss_dssp HHHHHHHHHHTTCBTTEEEEEEECCTTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHHHHHHHHHTCCC
T ss_pred HHHHHHHHhhhccCCceEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcchhhhhhhccCC
Confidence 2222111 122455777777778888999999999999999999999998544 33322221 111122110
Q ss_pred cccccccCChhhHHHHHHHHHHHHHh-cCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcccc
Q 009410 256 PEGHALSRPPLLEGEATTRAIRLAEF-VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (535)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 334 (535)
.|. ....+.... .+.++.+.|+...+. ++++.+++.|+.+..||..+ +..+
T Consensus 236 -------~~~-------~~~~~~l~~~~~~~~~~~H~~~~~~-~~~~~l~~~g~~~~~~p~s~-------------~~~~ 287 (427)
T 3v7p_A 236 -------RPV-------NDTKSFLELFKELHTLFVHMVWANE-EEIQTIASYNAHIIHCPISN-------------RLLG 287 (427)
T ss_dssp -------SCS-------SCHHHHHHTTTTSEEEEEECTTCCH-HHHHHHHHSEEEEEECHHHH-------------HHTT
T ss_pred -------Ccc-------cCHHHHHhhhcCCCEEEEECCCCCH-HHHHHHHHcCCEEEECHHHH-------------HHhc
Confidence 110 011221122 467788999998887 88999999999998888642 1111
Q ss_pred ceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHH
Q 009410 335 AKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVR 414 (535)
Q Consensus 335 ~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~ 414 (535)
... +| ++++ +|+++++|||+...+.... +|. +++....... ....+++++++|+
T Consensus 288 ~~~---~~---------~~~~--~Gv~v~lgtD~~~~~~~~~-----~~~------~~~~a~~~~~-~~~~~~~~~~~~~ 341 (427)
T 3v7p_A 288 NGV---LD---------LEKI--KSIPYAIATDGLSSNYSLN-----MYE------ELKAALFVHP-NKEATTFAKELII 341 (427)
T ss_dssp CCC---CC---------TTTT--TTSCEEECCCCTTSCSCCC-----HHH------HHHHHHHHST-TSCHHHHHHHHHH
T ss_pred CCC---CC---------HHHH--CCCeEEEeCCCCCCCCCCC-----HHH------HHHHHHHhcc-CCCcccCHHHHHH
Confidence 111 12 3333 8999999999644322211 111 2222222211 0111256789999
Q ss_pred HHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeeccc
Q 009410 415 LTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 494 (535)
Q Consensus 415 ~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~ 494 (535)
++|.+||+++|++ .|+|++||.|||||+|.+.++..+.++.. ......++|..||++|++||++|+++..
T Consensus 342 ~~t~~~a~~~g~~--~g~l~~G~~Ad~~~~d~~~~~~~~~~~~~--------~~~~~~~~v~~v~v~G~~v~~~g~~~~~ 411 (427)
T 3v7p_A 342 RATKAGYDALGFE--GGEIAVGKDADMQLIDLPEGLTNVEDLYL--------HVILHTTKPKKVYIQGEEHVREAENLYF 411 (427)
T ss_dssp HHTHHHHHHHTCS--CSSCCTTSBCCEEEEECCTTCCCGGGHHH--------HHHHHCSSCSEEEETTEEEEC---CCCB
T ss_pred HHHHHHHHHhCCC--CceeCCCCccCEEEEcCCCccCCCccchH--------HHhcccCCccEEEECCEEEEECCcccCC
Confidence 9999999999994 89999999999999999877655432211 1111135799999999999999999886
Q ss_pred C
Q 009410 495 P 495 (535)
Q Consensus 495 ~ 495 (535)
.
T Consensus 412 ~ 412 (427)
T 3v7p_A 412 Q 412 (427)
T ss_dssp C
T ss_pred c
Confidence 4
No 48
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=100.00 E-value=7.6e-35 Score=287.89 Aligned_cols=321 Identities=13% Similarity=0.131 Sum_probs=243.4
Q ss_pred CCCEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-ccc-cccceee
Q 009410 99 TGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSC-MDYGFHM 175 (535)
Q Consensus 99 ~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~-~~~~~~~ 175 (535)
.|++|+||+||+|+|+.. |. ......+++++||||+++|.+..+. ...+.++.+.+... ... +++.++.
T Consensus 22 ~~~~vlPG~ID~HvHlre---G~-----~~~e~~aA~aGG~Ttvi~mPnt~P~~~~~~~~~~~~~~a~~~~~~vd~~~~~ 93 (359)
T 3pnu_A 22 SNAMKLKNPLDMHLHLRD---NQ-----MLELIAPLSARDFCAAVIMPNLIPPLCNLEDLKAYKMRILKACKDENFTPLM 93 (359)
T ss_dssp SCCEEEESCEEEEECCCS---HH-----HHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CCcEEccCcEEccccCCC---CC-----cchhHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHHhccCCCceEEEee
Confidence 489999999999999975 22 2233457888999999999765443 45555655555443 344 7888887
Q ss_pred e--eecCChhhHHHHHHHHHHcCCCEEEEEeecC------CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHH
Q 009410 176 A--ITKWDEVVSDEMEVMVKEKGINSFKFFMAYK------GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (535)
Q Consensus 176 ~--~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~------~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~ 247 (535)
. .+..+ .+++.++. +. +.++|+|+.+. +....+.+.++++++.+++.|.++.+|+++...+.
T Consensus 94 ~l~lt~~~---~~el~~l~-~~-v~~~Kl~~aga~~~s~~~~~~~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~----- 163 (359)
T 3pnu_A 94 TLFFKNYD---EKFLYSAK-DE-IFGIKLYPAGITTNSNGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVM----- 163 (359)
T ss_dssp EEECSCCC---HHHHHHHT-TT-CSEEEECBTTSSSSCTTSBCCCCHHHHHHHHHHHHHTTCCEEECCCCSSCGG-----
T ss_pred eeEecCCC---HHHHHHHH-Hh-hhehhheeCCCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEecCCchHhH-----
Confidence 7 55322 35566655 34 77899988642 22334899999999999999999999998775310
Q ss_pred HHHcCCCCcccccccCChhhHHHHHHHHHHHHHhc-CCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccc
Q 009410 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWL 326 (535)
Q Consensus 248 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~ 326 (535)
..|...+.+++.++++. +.++|+.|+++.++++.++.+ .+|+++++|||++++.+++
T Consensus 164 ------------------~~E~~ai~r~~~la~~~~g~~lhi~HvSt~~~v~~I~~A----~~VtaEv~phhL~lt~~~~ 221 (359)
T 3pnu_A 164 ------------------DRESNFAKIYEKLAKHFPRLKIVMEHITTKTLCELLKDY----ENLYATITLHHLIITLDDV 221 (359)
T ss_dssp ------------------GTTGGGHHHHHHHHHHCTTSCEEECSCCSHHHHHHHHHC----TTEEEEECSGGGTCCHHHH
T ss_pred ------------------HHHHHHHHHHHHHHHHcCCCcEEEEecCcHHHHHHHHhc----CCceEEEechhhEEcHHHh
Confidence 12334577788888865 999999999998876666654 7899999999999999887
Q ss_pred cCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeE-EEeCCCCCCChhhhhcCCCCcccCcc--hHHHHHHHHHHHHHh
Q 009410 327 WHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPN--GIEERMHLVWDTMVE 403 (535)
Q Consensus 327 ~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~-~lgtD~~~~~~~~~~~~~~~~~~~~~--g~~~~l~~~~~~~~~ 403 (535)
.... .+..++++||+|...+++++|+.+++|.+. .++|||+|+....+.. +|. .++ +++..+++++.. +.
T Consensus 222 ~~~~--~~~~~k~~PPLR~~~dr~aL~~al~dG~id~~iaTDHaPh~~~eK~~---~~g-~~Gi~~~~~~L~l~~~~-~~ 294 (359)
T 3pnu_A 222 IGGK--MNPHLFCKPIAKRYEDKEALCELAFSGYEKVMFGSDSAPHPKDTKEC---CGC-AAGVFSAPVILPVLAEL-FK 294 (359)
T ss_dssp HTSS--CCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCBC---------CC-CSCBCCGGGHHHHHHHH-HH
T ss_pred cCcC--CCCceEEcCCCCCHHHHHHHHHHHhcCCCCEEEecCCCCCCHHHhCC---CCC-CCChhhHHHHHHHHHHH-Hh
Confidence 5322 247889999999999999999999999998 7999999999888753 342 333 566666777743 33
Q ss_pred cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCC-CCeeEeeEEE
Q 009410 404 SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVY-EGRRVKGKVE 476 (535)
Q Consensus 404 ~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~-~~~~~~~~v~ 476 (535)
. +++++++++..|.|||++||+..+. | |||+|+| ..|.++++.+.++..|+|| +|..+.++|.
T Consensus 295 ~-~~~l~~lv~~~s~nPAki~gL~~~~-----G--Adlvl~d--~~~~v~~~~~~s~~~~tPf~~G~~l~G~v~ 358 (359)
T 3pnu_A 295 Q-NSSEENLQKFLSDNTCKIYDLKFKE-----D--KILTLEE--KEWQVPNVYEDKYNQVVPYMAGEILKFQLK 358 (359)
T ss_dssp H-HSCHHHHHHHHTHHHHHHHTCCCSS-----C--CEEEEEC--CCEECCSCEECSSCEECCTTTTCEESCEEC
T ss_pred h-cCCHHHHHHHHHHhHHHHhCCCCCC-----C--CeEEEEe--cCEEeCchhcccCCCccccCCCCEEEEEEe
Confidence 3 4799999999999999999996443 4 9999999 7899999999999999999 9998888774
No 49
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=100.00 E-value=5.3e-33 Score=295.13 Aligned_cols=331 Identities=20% Similarity=0.164 Sum_probs=222.0
Q ss_pred cccEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHH
Q 009410 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~ 129 (535)
.++++|+|++|+|+.+ ...++|+|+||||++|++......+.++||++|++|+|||||+|+|+... ..+++.
T Consensus 34 ~~dlli~n~~ivd~~~~~~~~~dI~I~~G~I~~Vg~~~~~~~~~~vID~~G~~v~PG~ID~H~Hl~~~---~~~~~~--- 107 (608)
T 3nqb_A 34 RFDVLITGGTLVDVVTGELRPADIGIVGALIASVHEPASRRDAAQVIDAGGAYVSPGLIDTHMHIESS---MITPAA--- 107 (608)
T ss_dssp CEEEEEESCEEECTTTCCEEECEEEEETTEEEEEECTTSCCCEEEEEECTTSEEEECEEEEEECGGGG---TSCHHH---
T ss_pred CCCEEEECeEEEECCCCeEEeeEEEEECCEEEEecCCCCCCCCCeEEeCCCCEEecCeEecccCcccc---cCCHHH---
Confidence 6889999999999864 46789999999999999865334568899999999999999999999765 234443
Q ss_pred HHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceee-eeec--------CChhhHHHHHHHHHHcCCCE
Q 009410 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHM-AITK--------WDEVVSDEMEVMVKEKGINS 199 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~g~~~ 199 (535)
..+.++.+||||++++...... .....++...+.......++.+.. .... ......+++.++.+..++.+
T Consensus 108 ~~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~p~~~P~~~~~~~~g~~~~~~el~~l~~~~~v~g 187 (608)
T 3nqb_A 108 YAAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPSCVPSAPGLERGGADFDAAILADLLSWPEIGG 187 (608)
T ss_dssp HHHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEECCCSSSSTTSCCCSCCCCHHHHHHHHTSTTEEE
T ss_pred HHHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEeccccCCCCCccccCcccCCHHHHHHHHhccCcce
Confidence 3678899999999975321111 123444444444433333332222 1100 01123456667664567788
Q ss_pred EEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHH
Q 009410 200 FKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (535)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (535)
++.++++.+. ....+.+.+.++.|++.|+++.+|+..... ..+..+..
T Consensus 188 lgE~~~~~~v-~~~d~~l~~~l~~A~~~g~pV~~Ha~~~~~--~~L~~~~~----------------------------- 235 (608)
T 3nqb_A 188 IAEIMNMRGV-IERDPRMSGIVQAGLAAEKLVCGHARGLKN--ADLNAFMA----------------------------- 235 (608)
T ss_dssp EEEECCHHHH-HTTCHHHHHHHHHHHHHTCEEEECCTTCCH--HHHHHHHH-----------------------------
T ss_pred eeEeeccCCc-CCCcHHHHHHHHHHHHcCCEEEEcCCCCCH--HHHHHHHH-----------------------------
Confidence 8877765432 235678999999999999999999975432 12222222
Q ss_pred HhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHh--
Q 009410 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALA-- 357 (535)
Q Consensus 280 ~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~-- 357 (535)
.+.. ..|+....+ +.++.++ .|+.+... .. . ..+...+..+++
T Consensus 236 --aGv~--~~H~~~~~e-ea~e~l~-~G~~i~i~-gs-------------------~---------~~~~~~l~~~i~~~ 280 (608)
T 3nqb_A 236 --AGVS--SDHELVSGE-DLMAKLR-AGLTIELR-GS-------------------H---------DHLLPEFVAALNTL 280 (608)
T ss_dssp --TTCC--EECCCCSHH-HHHHHHH-TTCEEEEE-SS-------------------S---------GGGHHHHHHHHHHH
T ss_pred --cCCC--eeeccCCHH-HHHHHHH-CCCEEEEe-cc-------------------c---------cccHHHHHHHHHhH
Confidence 2333 368766654 6666654 68766543 11 0 001123444443
Q ss_pred --cCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccC
Q 009410 358 --TGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILV 435 (535)
Q Consensus 358 --~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~ 435 (535)
.|++++++||+... .... . +..+...++.+++. |++++++++++|.|||++||+ +++|+|++
T Consensus 281 ~~~g~~v~lgTD~~~p-~~~~-------~------~g~l~~~v~~~~~~-Gls~~eal~~aT~n~A~~lgl-~~~G~i~~ 344 (608)
T 3nqb_A 281 GHLPQTVTLCTDDVFP-DDLL-------Q------GGGLDDVVRRLVRY-GLKPEWALRAATLNAAQRLGR-SDLGLIAA 344 (608)
T ss_dssp TSCCTTEEEECBSCCH-HHHH-------H------TCSHHHHHHHHHHT-TCCHHHHHHHHTHHHHHHHTC-TTSSCCST
T ss_pred hhcCceEEEecCCCCC-cchh-------h------hcchHHHHHHHHHc-CCCHHHHHHHHHHHHHHHcCC-CCCcCcCC
Confidence 79999999996421 1100 0 01244445455555 799999999999999999999 57899999
Q ss_pred CCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeeccc
Q 009410 436 GSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 494 (535)
Q Consensus 436 Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~ 494 (535)
||.||||++|.-. ..+|..||++|++|+++|+++..
T Consensus 345 G~~ADlvv~d~l~-----------------------~~~v~~v~~~G~~v~~~g~~~~~ 380 (608)
T 3nqb_A 345 GRRADIVVFEDLN-----------------------GFSARHVLASGRAVAEGGRMLVD 380 (608)
T ss_dssp TSBCCEEEESCTT-----------------------TCCEEEEEETTEEEEETTEECSC
T ss_pred CCCccEEEECCCC-----------------------CCcceEEEECCEEEEECCeEecc
Confidence 9999999998410 12799999999999999998754
No 50
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=100.00 E-value=6e-33 Score=282.80 Aligned_cols=344 Identities=22% Similarity=0.200 Sum_probs=210.9
Q ss_pred cccEEEEccEEEcCCCc-eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCC--------
Q 009410 52 SSKILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE-------- 122 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~-~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~-------- 122 (535)
+++++|+|++|+|+++. ..++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|++....+..
T Consensus 4 ~~~~~i~~~~i~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~~~Pg~~d~h~h~~~~~~~~~~~~~~~~~ 82 (396)
T 3ooq_A 4 SVKILFKNATVFPITSRPFKGDVLVSNGKVEKVGENIE-DPDAEIVDLTGKFLFPGFVDAHSHIGLFEEGVGYYYSDGNE 82 (396)
T ss_dssp --CEEEEEEEECCSSSCCEEEEEEEETTEEEEEESCCC-CTTSEEEECTTCEEEECEEEEEECTTTSCTTSCGGGCCSCC
T ss_pred cceEEEECcEEEeCCCCeEEeEEEEECCEEEEecCCCC-CCCCeEEECCCCEEecCEEecccccCccccCcccccccccc
Confidence 46789999999998753 34999999999999998766 667899999999999999999999986521110
Q ss_pred ---------chhhh----HHHHHHHHhCCcEEEeccccCCCC---------ChHHHHHHHHHHhcc-cccccceeee---
Q 009410 123 ---------TIDDF----FSGQAAALAGGTTMHIDFVIPING---------SLTAGFEAYEKKAKN-SCMDYGFHMA--- 176 (535)
Q Consensus 123 ---------~~~~~----~~~~~~~l~~GvTtv~d~~~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~~~--- 176 (535)
...+. ......++++||||++++++..+. ......+........ ....++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~gs~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~ 162 (396)
T 3ooq_A 83 ATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIVPGSANPVGGQGSVIKFRSIIVEECIVKDPAGLKMAFGENPKRVY 162 (396)
T ss_dssp TTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEECCCSSSSEEEEEEEEESCCSSHHHHEEEEEEEEEEECSHHHHHHH
T ss_pred ccCccCccccHhhhcCcCcHHHHHHHhCCeEEEeccCCCCCcccCeeEEEeccCCCHHHceecCCcEEEEEcCCCCcccc
Confidence 11111 135678899999999998544321 000011110000000 0000110000
Q ss_pred -----eecCChhhHHHHHHHHHHcCCCEEE---EEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHH
Q 009410 177 -----ITKWDEVVSDEMEVMVKEKGINSFK---FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRM 248 (535)
Q Consensus 177 -----~~~~~~~~~~~~~~~~~~~g~~~ik---~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~ 248 (535)
.+.........+++.... +....+ ......+.. ...+...+.+..+.+.++++.+|+.....+
T Consensus 163 ~~~~~~p~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~g~~-~~~~~~~e~l~~~~~~~~~v~iHa~~~~~i------- 233 (396)
T 3ooq_A 163 GERKQTPSTRMGTAGVIRDYFTK-VKNYMKKKELAQKEGKEF-TETDLKMEVGEMVLRKKIPARMHAHRADDI------- 233 (396)
T ss_dssp HHTTCSCSSHHHHHHHHHHHHHH-HHHHHHHHHHHHHTTCCC-CCCCHHHHHHHHHHTTSSCEEEEECSHHHH-------
T ss_pred cccCCCCccHHHHHHHHHHHHHH-HHHHHHhhhhhhhccCCC-CCcChhHHHHHHHHcCCCcEEEEECchhHH-------
Confidence 000000111222222110 000000 000000111 122233444445568899999999776432
Q ss_pred HHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccC
Q 009410 249 IELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWH 328 (535)
Q Consensus 249 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~ 328 (535)
.+++++..+.+.++.+.|+.... +.++.+++.|+.++.||.....
T Consensus 234 ------------------------~~~~~~~~~~g~~~~i~H~~~~~--~~~~~l~~~gv~v~~~P~~~~~--------- 278 (396)
T 3ooq_A 234 ------------------------LTAIRIAEEFGFNLVIEHGTEAY--KISKVLAEKKIPVVVGPLLTFR--------- 278 (396)
T ss_dssp ------------------------HHHHHHHHHHTCCEEEEECTTGG--GGHHHHHHHTCCEEECCCSSCC---------
T ss_pred ------------------------HHHHHHHHHcCCCEEEecCchHH--HHHHHHHHCCCCEEECcccccc---------
Confidence 23445556667888899998866 3588899999999988763110
Q ss_pred cCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCC
Q 009410 329 SDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQIS 408 (535)
Q Consensus 329 ~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls 408 (535)
.++... .....+++.++++|+++++|||+...+... +.... .+....+++
T Consensus 279 ~~~~~~-----------~~~~~~~~~l~~~Gv~v~lgtD~~~~~~~~------------------l~~~~-~~~~~~gl~ 328 (396)
T 3ooq_A 279 TKLELK-----------DLTMETIAKLLKDGVLIALMCDHPVIPLEF------------------ATVQA-ATAMRYGAK 328 (396)
T ss_dssp CSGGGT-----------TCCTTHHHHHHHTTCCEEECCTTTTSCGGG------------------HHHHH-HHGGGGTCC
T ss_pred cchhHH-----------hhhhHHHHHHHHCCCEEEEEcCCCccCccH------------------HHHHH-HHHHHcCCC
Confidence 011000 011245889999999999999974332211 11222 222345799
Q ss_pred HHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC
Q 009410 409 VTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 409 ~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~ 488 (535)
++++|+++|.|||+++|+++++|+|++||.|||||+|.|++.. ..+|+.||++|++||+.
T Consensus 329 ~~~al~~~T~n~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~--------------------~~~v~~v~~~G~~v~~~ 388 (396)
T 3ooq_A 329 EEDLLKILTVNPAKILGLEDRIGSIEPGKDADLVVWSGHPFDM--------------------KSVVERVYIDGVEVFRR 388 (396)
T ss_dssp HHHHHHTTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTST--------------------TCCEEEEEETTEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCCCeeeECCCCcCCEEEECCCcccc--------------------ccceeEEEECCEEEeCC
Confidence 9999999999999999998889999999999999999875421 14799999999999987
Q ss_pred Ce
Q 009410 489 DE 490 (535)
Q Consensus 489 ~~ 490 (535)
..
T Consensus 389 ~~ 390 (396)
T 3ooq_A 389 EG 390 (396)
T ss_dssp C-
T ss_pred CC
Confidence 43
No 51
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=100.00 E-value=6.2e-34 Score=294.42 Aligned_cols=347 Identities=18% Similarity=0.184 Sum_probs=218.9
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCC------------CCCceEEecCCCEEeecccccccccccccC
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~------------~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 119 (535)
..+++|+|++|+|..+...++|+|+||||++|++.... ..+.++||++|++|+|||||+|+|+..+
T Consensus 66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~P-- 143 (570)
T 4ac7_C 66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINP-- 143 (570)
T ss_dssp BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCT--
T ss_pred CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccccCCc--
Confidence 67899999999997777789999999999999985321 2467899999999999999999998755
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEecccc-------CCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVI-------PING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (535)
+. ...++++||||+++... .... .....++...+......++++++..... +...++.++
T Consensus 144 g~---------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~~~~v~~~~~g~~~~---~~l~el~el 211 (570)
T 4ac7_C 144 DQ---------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHG---SSIAPIMEQ 211 (570)
T ss_dssp TH---------HHHHHHTTEEEEEEECSSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECCC---SSHHHHHHH
T ss_pred ch---------HHHHHhcCCeEEEecCcCcccccCCcCcCCcHHHHHHHHHHhhhCCeeEEEEeccCC---cCHHHHHHH
Confidence 21 36789999999995322 1111 2344555555555566777777764332 235677777
Q ss_pred HHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHH
Q 009410 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (535)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (535)
. +.|+.++|++.++ ..+++.++++++.|++.++++.+|+++........+.+.
T Consensus 212 ~-~aGa~gfK~~~~~----~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~g~Vedale---------------------- 264 (570)
T 4ac7_C 212 I-DAGAAGLKIHEDW----GATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTLR---------------------- 264 (570)
T ss_dssp H-HHTCCEEEEEGGG----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHH----------------------
T ss_pred H-HcCCCeEeeccCC----CCCHHHHHHHHHHHHHcCCEEEEEcCCcchhhHHHHHHH----------------------
Confidence 7 7899999998654 358999999999999999999999986532111111111
Q ss_pred HHHHHHHHHhcCCCEEEEEccCH---HHHHHHHHHHHcCCcEEec---cc-cceE--------------eeCcccccCcC
Q 009410 272 TTRAIRLAEFVNTPLYVVHVMSM---DAMEEIAKARKAGQRVIGE---PV-VSGL--------------VLDDSWLWHSD 330 (535)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~H~~~~---~~~~~~~~~~~~g~~v~~~---~~-~~~~--------------~~~~~~~~~~~ 330 (535)
...+...+..|.... ...+.++.+.+.+ |.+. |+ ++.. ++++....+..
T Consensus 265 --------a~~Gr~ih~~HiEgag~~hapd~i~~~~~~~--vlps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~ 334 (570)
T 4ac7_C 265 --------AINGRVIHSFHVEGAGGGHAPDIMAMAGHPN--VLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVA 334 (570)
T ss_dssp --------HHTTCCEEETTTTSTTSSSTTTGGGGGGSTT--EEEBCCGGGSSCBTTHHHHHHHHHHHHTTCCTTCHHHHH
T ss_pred --------HhCCCcceeEeeeccccccChHHHHHhccCC--ccccccCCCCCcccchhHHhhhheeeecccCccccchhH
Confidence 112334444443321 1113344333333 2221 11 0000 00000000000
Q ss_pred ccccceeEEcCCCCCc-ccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHH-HH-----h
Q 009410 331 FVTAAKYVMSPPIRAS-GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDT-MV-----E 403 (535)
Q Consensus 331 ~~~~~~~~~~p~~r~~-~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~-~~-----~ 403 (535)
|. ..|.. ....+.+.+++.|+.+++|||+......... +.. ..+......... .. .
T Consensus 335 ~a---------~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~-----~~~---~~~~a~~~~~~rg~l~~~~~~ 397 (570)
T 4ac7_C 335 FA---------DSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEM-----VLR---TWQTADKMKKQRGPLAEEKNG 397 (570)
T ss_dssp HH---------HHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCH-----HHH---HHHHHHHHHHHHCSCTTCCTT
T ss_pred HH---------HhhhhhhhcccccchhhcCCEEEEECcccccCCcCcc-----cCc---HHHHHHHHHHhcCCCCCcccc
Confidence 00 00000 1123567899999999999996543211000 000 000000000000 00 1
Q ss_pred cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCE
Q 009410 404 SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGR 483 (535)
Q Consensus 404 ~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr 483 (535)
..++++++||+++|.|||+++|+++++|+|++||.|||||||.+++ . .+|..||++|+
T Consensus 398 ~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~~-----------------~-----~~v~~t~~~G~ 455 (570)
T 4ac7_C 398 SDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFF-----------------G-----VKADRVIKGGI 455 (570)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGGT-----------------T-----TSCSEEEETTE
T ss_pred ccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECchhc-----------------c-----CceEEEEECCE
Confidence 3447899999999999999999988899999999999999997633 1 26789999999
Q ss_pred EEEEC
Q 009410 484 VVWEN 488 (535)
Q Consensus 484 ~V~~~ 488 (535)
+||+.
T Consensus 456 ~v~~~ 460 (570)
T 4ac7_C 456 IAYAQ 460 (570)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 99985
No 52
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=100.00 E-value=6.2e-34 Score=294.42 Aligned_cols=343 Identities=18% Similarity=0.188 Sum_probs=218.9
Q ss_pred cccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCC------------CCCceEEecCCCEEeecccccccccccccC
Q 009410 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~------------~~~~~vID~~G~~vlPGlID~H~H~~~~~~ 119 (535)
..+++|+|++|+|..+...++|+|+||||++|++.... ..+.++||++|++|+|||||+|+|+..+
T Consensus 66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~P-- 143 (570)
T 4ubp_C 66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINP-- 143 (570)
T ss_dssp BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCT--
T ss_pred CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCCCCc--
Confidence 67899999999997777789999999999999985321 2467899999999999999999998755
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEecccc-------CCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVI-------PING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (535)
+. ...++++||||+++... .... .....++...+......++++++..... +...++.++
T Consensus 144 g~---------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~~~~v~~~~~g~~~~---~~l~el~el 211 (570)
T 4ubp_C 144 DQ---------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHG---SSIAPIMEQ 211 (570)
T ss_dssp TH---------HHHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECCC---SSHHHHHHH
T ss_pred ch---------HHHHHhcCCeEEEecCccccccCCCcCCCCcHHHHHHHHHHhhhCCeeEEEEeccCC---cCHHHHHHH
Confidence 21 36789999999995322 1111 2344555555555566777777764332 235677777
Q ss_pred HHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHH
Q 009410 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (535)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (535)
. +.|+.++|++.++ ..+++.++++++.|++.++++.+|+++........+.+.
T Consensus 212 ~-~aGa~gfK~~~~~----~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~g~Vedale---------------------- 264 (570)
T 4ubp_C 212 I-DAGAAGLKIHEDW----GATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTLR---------------------- 264 (570)
T ss_dssp H-HHTCCEEEEEGGG----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHH----------------------
T ss_pred H-HcCCCeEeeccCC----CCCHHHHHHHHHHHHHcCCEEEEEcCCcchhhHHHHHHH----------------------
Confidence 7 7899999998654 358999999999999999999999986532111111111
Q ss_pred HHHHHHHHHhcCCCEEEEEccCH---HHHHHHHHHHHcCCcEEec---ccc-ceE--------------eeCcccccCcC
Q 009410 272 TTRAIRLAEFVNTPLYVVHVMSM---DAMEEIAKARKAGQRVIGE---PVV-SGL--------------VLDDSWLWHSD 330 (535)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~H~~~~---~~~~~~~~~~~~g~~v~~~---~~~-~~~--------------~~~~~~~~~~~ 330 (535)
...+...+..|.... ...+.++.+.+.+ |.+. |+. +.. ++++....+..
T Consensus 265 --------a~~Gr~ih~~HiEgag~~hapd~i~~~~~~~--vlps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~ 334 (570)
T 4ubp_C 265 --------AINGRVIHSFHVEGAGGGHAPDIMAMAGHPN--VLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVA 334 (570)
T ss_dssp --------HHTTCCEEETTTTSTTSSSTTTGGGGGGSTT--EEEBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHHHHH
T ss_pred --------HhCCCceeEEEecccccccChHHHHHhccCC--ccccccCCCCCcccchhHHhhhheeeecccCccccchhH
Confidence 112334444443321 1113344333333 2221 110 000 00000000000
Q ss_pred ccccceeEEcCCCCCc-ccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHH--HHHHH-----
Q 009410 331 FVTAAKYVMSPPIRAS-GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLV--WDTMV----- 402 (535)
Q Consensus 331 ~~~~~~~~~~p~~r~~-~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~--~~~~~----- 402 (535)
|. ..|.. ....+.+.+++.|+.+++|||+......... +...+... .....
T Consensus 335 ~a---------~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~------------~~~~~~~a~~~~~~rg~l~~ 393 (570)
T 4ubp_C 335 FA---------DSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEM------------VLRTWQTADKMKKQRGPLAE 393 (570)
T ss_dssp HH---------HHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCH------------HHHHHHHHHHHHHHHCSCTT
T ss_pred HH---------HhhhhhhccccccchhhcCCEEEEECcccccCCcCcc------------cCcHHHHHHHHHHhcCCCCC
Confidence 00 00000 1123567899999999999996543211000 00001110 00000
Q ss_pred ---hcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEE
Q 009410 403 ---ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTI 479 (535)
Q Consensus 403 ---~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~ 479 (535)
...++++++||+++|.|||+++|+++++|+|++||.|||||||.+++ . .+|..||
T Consensus 394 ~~~~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~~-----------------~-----~~v~~t~ 451 (570)
T 4ubp_C 394 EKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFF-----------------G-----VKADRVI 451 (570)
T ss_dssp CCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGGT-----------------T-----TSCSEEE
T ss_pred ccccccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECcccc-----------------c-----CCeeEEE
Confidence 12347899999999999999999988899999999999999997633 1 2678999
Q ss_pred ECCEEEEEC
Q 009410 480 AGGRVVWEN 488 (535)
Q Consensus 480 ~~Gr~V~~~ 488 (535)
++|++||+.
T Consensus 452 ~~G~~v~~~ 460 (570)
T 4ubp_C 452 KGGIIAYAQ 460 (570)
T ss_dssp ETTEEEEEE
T ss_pred ECCEEEEec
Confidence 999999985
No 53
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=100.00 E-value=1.5e-33 Score=292.12 Aligned_cols=361 Identities=14% Similarity=0.102 Sum_probs=227.3
Q ss_pred EEccEEEcCCCc-eeeeEEE-eCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccC-C-------------
Q 009410 57 IKGGTVVNAHHQ-QIADVYV-EDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G------------- 120 (535)
Q Consensus 57 i~n~~vi~~~~~-~~~~I~I-~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g------------- 120 (535)
+...+++.+++. ++++|+| +||+|++|++..+. ..++|++| +|+|||||+|+|+.+... |
T Consensus 4 ~~~~~~~~~~~~~~~~~v~i~~~g~I~~ig~~~~~---~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~~~~~~~l~ 79 (453)
T 3mdu_A 4 IFAERALLPEGWARNVRFEISADGVLAEIRPDANA---DGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVAGNPNDSFW 79 (453)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTSBEEEEESSCCC---TTSEECSS-CEEECEEEEEECGGGGGGTTTTCCCSSTTCCHH
T ss_pred cchhheecCCceecCeEEEEecCCEEEEecCCCCc---ccccccCC-cccccceecccchHHHhhccccccccCCCCcHH
Confidence 445566666664 7899999 89999999987542 34579999 999999999999965521 1
Q ss_pred -----------CCchhhhHHHH----HHHHhCCcEEEeccccCCC-------C----ChHHHHHHHHHHhccccccccee
Q 009410 121 -----------SETIDDFFSGQ----AAALAGGTTMHIDFVIPIN-------G----SLTAGFEAYEKKAKNSCMDYGFH 174 (535)
Q Consensus 121 -----------~~~~~~~~~~~----~~~l~~GvTtv~d~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~ 174 (535)
..++++++... ..++++||||+.|+..... . .....++...+.+.+..+...++
T Consensus 80 ~wl~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~ 159 (453)
T 3mdu_A 80 TWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLLPVLY 159 (453)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEECBC
T ss_pred HHHHHHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCCeEEEecchh
Confidence 11333333322 3368899999999743211 1 12344555555555433211111
Q ss_pred e-----eee---------cCChhhHHHHHHHHH---HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEc-C
Q 009410 175 M-----AIT---------KWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-E 236 (535)
Q Consensus 175 ~-----~~~---------~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~ 236 (535)
. ... ...++..+.+..+.+ ..+. .+.+.+++...++++.++++++.|+ .|+++++|+ +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~e~l~~~~~~A~-~g~~v~~H~~e 235 (453)
T 3mdu_A 160 SHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGH---SLGLCFHSLRAVTPQQIATVLAAGH-DDLPVHIHIAE 235 (453)
T ss_dssp CBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHHTC---EECEEEEETTTSCHHHHHHHHTSSC-TTSCEEEEESC
T ss_pred ccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcCCC---eEEEecCCCCcCCHHHHHHHHHHHh-cCCCEEEEeCC
Confidence 0 000 011122233333221 1232 4444555667789999999999999 999999997 4
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEecccc
Q 009410 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (535)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~ 316 (535)
+..+.....+. .|.. .+..+.+ ....+.++.+.|+...+. ++++++++.|+.++.||..
T Consensus 236 ~~~e~~~~~~~---~g~~----------------~v~~l~~-~g~~~~~~~~~H~~~~~~-~~i~~la~~g~~v~~~P~s 294 (453)
T 3mdu_A 236 QQKEVDDCQAW---SGRR----------------PLQWLYE-NVAVDQRWCLVHATHADP-AEVAAMARSGAVAGLCLST 294 (453)
T ss_dssp SHHHHHHHHHH---HSSC----------------HHHHHHH-HSCCCTTEEEEECCSCCH-HHHHHHHHHTCEEEECHHH
T ss_pred CHHHHHHHHHH---hCCC----------------HHHHHHH-cCCCCCCeEEEEcCCCCH-HHHHHHHHcCCEEEECchh
Confidence 44444333322 2221 1222222 234466888999998877 8899999999999998864
Q ss_pred ceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHH
Q 009410 317 SGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHL 396 (535)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~ 396 (535)
. +..+... .++++++++|+++++|||.... .+ +|. +++...
T Consensus 295 n-------------~~lg~g~------------~p~~~~~~~Gv~v~lgtD~~~~-~~-------~~~------~~~~~~ 335 (453)
T 3mdu_A 295 E-------------ANLGDGI------------FPATDFLAQGGRLGIGSDSHVS-LS-------VVE------ELRWLE 335 (453)
T ss_dssp H-------------HHTTCCC------------CCHHHHHHTTCEEEECCBTCSC-CC-------HHH------HHHHHH
T ss_pred H-------------hhcCCCC------------CCHHHHHHCCCEEEEECCCCCC-CC-------HHH------HHHHHH
Confidence 2 1122211 1288999999999999995421 11 111 223332
Q ss_pred HHHHHHh---------cCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceee--ecCCccccCCCCC
Q 009410 397 VWDTMVE---------SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEI--TARSHHSRLDTNV 465 (535)
Q Consensus 397 ~~~~~~~---------~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i--~~~~~~~~~~~~p 465 (535)
...+... ..+++++++|+++|.|||+++|+ ++|+|++||.|||||+|.+.++.. +.+++.+. ..
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~~~--~~G~l~~G~~AD~~~~d~~~~~~~~~~~~~~~~~---~~ 410 (453)
T 3mdu_A 336 YGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQ--PIGSLAVGRRADLLVLDGNDPYLASAEGDALLNR---WL 410 (453)
T ss_dssp HHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHHHHHHHTS--SCSSCCTTSBCCEEEECTTCHHHHTCCHHHHHHH---HH
T ss_pred HHHhhhccCCccccCcccCCCHHHHHHHHHHHHHHHhCC--CCCccCCCCcCCEEEEeCCCccccCCCccChHHH---he
Confidence 2222221 12699999999999999999999 689999999999999998866543 21111111 11
Q ss_pred CCCeeEeeEEEEEEECCEEEEECCeec
Q 009410 466 YEGRRVKGKVEVTIAGGRVVWENDELN 492 (535)
Q Consensus 466 ~~~~~~~~~v~~v~~~Gr~V~~~~~~~ 492 (535)
|.+. ..+|..||++|++||++|+++
T Consensus 411 ~~~~--~~~v~~v~v~G~~v~~~g~~~ 435 (453)
T 3mdu_A 411 FAGG--DRQVRDVMVAGRWVVRDGRHA 435 (453)
T ss_dssp HHCC--GGGEEEEEETTEEEEBTTBCT
T ss_pred eeCC--CCCeeEEEECCEEEEECCccC
Confidence 1111 247999999999999999975
No 54
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=100.00 E-value=2.5e-33 Score=284.35 Aligned_cols=350 Identities=15% Similarity=0.165 Sum_probs=205.1
Q ss_pred EEEEccEEEcCCCc-eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeeccccccccccccc--CC---CCchhhhH
Q 009410 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF--MG---SETIDDFF 128 (535)
Q Consensus 55 ~vi~n~~vi~~~~~-~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~--~g---~~~~~~~~ 128 (535)
++|+|++|++++.. ++++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+.... .. ..+++.++
T Consensus 2 ~li~~~~v~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~g~~~~~~~~~~~~~~~~ 81 (382)
T 1yrr_A 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLE 81 (382)
T ss_dssp EEEESSEEECSSCEESSEEEEEETTEEEEEEEGGGSCTTCCEEECTTCEEEECEEEEEESEETTEESSSSTTTSSHHHHH
T ss_pred EEEEeeEEEcCCceeeCCEEEEECCEEEEEecCCCCCccceeecCCCCEEccCEEEEeecccCCcCccccccCCCHHHHH
Confidence 68999999998764 57899999999999997654444578999999999999999999986431 11 12456666
Q ss_pred HHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHH----hcccccccceeeee----e---c--CC---hhh-HHHHHH
Q 009410 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKK----AKNSCMDYGFHMAI----T---K--WD---EVV-SDEMEV 190 (535)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~----~---~--~~---~~~-~~~~~~ 190 (535)
.....++++||||++|+...... ...+.+....+. +.+ . ++.+... . . .. .+. .+.++
T Consensus 82 ~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~--~g~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~- 157 (382)
T 1yrr_A 82 IMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQ-A--LGLHLEGPWLNLVKKGTHNPNFVRKPDAALVD- 157 (382)
T ss_dssp HHHHHHHHTTEEEEEEEEECCCHHHHHHHHHHHHHHHHHCTTS-B--CCEEEECSSCCCSCC-CCCSCSCCHHHHHHHH-
T ss_pred HHHHHHHhCCeEEEEeecCCCCHHHHHHHHHHHHHHhhccCCc-e--eEEEEeCCcCCccccCCCCHHHccCCCHHHHH-
Confidence 67788999999999998643322 122222222222 222 1 1111110 0 0 00 011 34444
Q ss_pred HHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEE-EcC-ChhhHHHHHHHHHHcCCCCcccccccCChhh-
Q 009410 191 MVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV-HAE-NGDAVFEGQKRMIELGITGPEGHALSRPPLL- 267 (535)
Q Consensus 191 ~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~-H~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~- 267 (535)
+. ..+.+.+|.+.- ...+.+.++++.|+++|+++++ |+. +...+. ...+.|....++.....+...
T Consensus 158 ~~-~~~~~~ik~~~~------~~~~~~~~~~~~a~~~g~~v~~gH~~~~~~~~~----~~~~~G~~~~~h~~~~~~~~~~ 226 (382)
T 1yrr_A 158 FL-CENADVITKVTL------APEMVPAEVISKLANAGIVVSAGHSNATLKEAK----AGFRAGITFATHLYNAMPYITG 226 (382)
T ss_dssp HH-HHTTTTEEEEEE------CGGGSCHHHHHHHHHTTCEEEECSCCCCHHHHH----HHHHHTCCEESSTTTTSCCBCS
T ss_pred HH-HhcCCCEEEEEE------CCCCChHHHHHHHHHCCCEEEEECCCCCHHHHH----HHHHcCCCeeEECCCCCCcccc
Confidence 55 557888887521 0124456789999999999998 997 444333 333456554432221111000
Q ss_pred -HHHHHHHHHHHHHhcCCC-EEEEEccCHHHHHHHHHHHHcC-CcEEeccccceEeeCcccccCcCccccceeEEcCCCC
Q 009410 268 -EGEATTRAIRLAEFVNTP-LYVVHVMSMDAMEEIAKARKAG-QRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIR 344 (535)
Q Consensus 268 -~~~~~~~~~~~~~~~~~~-~~~~H~~~~~~~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 344 (535)
+...+...+. ..+.. ..+.|+..... +.++.+++.+ ..+..++-. ..... .....+...
T Consensus 227 ~~~g~~~~~l~---~~~~~~~~~~h~~~~~~-~~~~~~~~~~~~~~~~~~d~---------~~~~g-~~~~~~~~~---- 288 (382)
T 1yrr_A 227 REPGLAGAILD---EADIYCGIIADGLHVDY-ANIRNAKRLKGDKLCLVTDA---------TAPAG-ANIEQFIFA---- 288 (382)
T ss_dssp SCCHHHHHHHH---CTTCEEEEECSSSSSCH-HHHHHHHHHHGGGEEEECCB---------CTTTT-SCCSEEEET----
T ss_pred CCcchhhHhhc---CCcceeeecCcccccCH-HHHHHHHHcCCCcEEEECcC---------hHhcC-CCCceEEEC----
Confidence 0000000110 00111 14667765444 5566666655 333333221 00000 000111110
Q ss_pred CcccHHHHHHHHhcCCeE-EEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHH
Q 009410 345 ASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARI 423 (535)
Q Consensus 345 ~~~~~~~~~~~l~~Gv~~-~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~ 423 (535)
.++.++++|+++ ..|||... .. . +...++.++...++|++++|+++|.|||++
T Consensus 289 ------~~~~~~~~Gv~~~~~Gt~~g~---~~-------------~----~~~~~~~~~~~~g~~~~~al~~aT~~~A~~ 342 (382)
T 1yrr_A 289 ------GKTIYYRNGLCVDENGTLSGS---SL-------------T----MIEGVRNLVEHCGIALDEVLRMATLYPARA 342 (382)
T ss_dssp ------TEEEEECSSCEECTTCCEEEB---CC-------------C----HHHHHHHHHHHHCCCHHHHHHHHTHHHHHH
T ss_pred ------CEEEEEECCEEEeCCCcCcCC---cc-------------C----HHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 023456778876 33554211 00 0 111122233234799999999999999999
Q ss_pred cCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC
Q 009410 424 FNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 488 (535)
Q Consensus 424 lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~ 488 (535)
+|+++++|+|++||.|||||+|.| .+|+.||++|++|+++
T Consensus 343 lg~~~~~G~i~~G~~ADlvvld~~-------------------------~~v~~v~~~G~~v~~~ 382 (382)
T 1yrr_A 343 IGVEKRLGTLAAGKVANLTAFTPD-------------------------FKITKTIVNGNEVVTQ 382 (382)
T ss_dssp TTCTTTSSSCCTTSBCCEEEECTT-------------------------SCEEEEEETTEEEEEC
T ss_pred hCCCCCCCccCCCCCCCEEEECCC-------------------------CCEEEEEECCEEEEeC
Confidence 999888999999999999999976 2789999999999975
No 55
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=100.00 E-value=6.2e-34 Score=308.75 Aligned_cols=367 Identities=14% Similarity=0.165 Sum_probs=210.7
Q ss_pred CcccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCC------------CCCCCCceEEecCCCEEeeccccccccccccc
Q 009410 51 SSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPN------------INVGDDVKVLDATGKFVMPGGIDPHTHLAMEF 118 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~------------~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~ 118 (535)
...|++|+|++|+|+++...++|+|+||||++||+. ...++++++||++|++|+|||||+|+|+..+
T Consensus 335 ~~~DLVItNA~IVD~tGi~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiVtPGfID~HvHl~~P- 413 (840)
T 4gy7_A 335 ISLDTVITNAVIIDYTGIIKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHYICP- 413 (840)
T ss_dssp GSCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEEEECEEEEEEECCCT-
T ss_pred ccCCEEEeCeEEECCCCeEEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEEccCeeeeccCCCCC-
Confidence 367999999999999888899999999999999962 2335678999999999999999999998755
Q ss_pred CCCCchhhhHHHHHHHHhCCcEEEeccccCCCC--------ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHH
Q 009410 119 MGSETIDDFFSGQAAALAGGTTMHIDFVIPING--------SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEV 190 (535)
Q Consensus 119 ~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (535)
+ ....++.+||||+++....... .................+++++........ .+.+.+
T Consensus 414 -~---------~~~eALasGVTTvv~gGtgp~~~~~~~~~~~~~~~~~~~l~a~~~~~vn~g~~~~~~~~~---~~~L~e 480 (840)
T 4gy7_A 414 -Q---------LVYEAISSGITTLVGGGTGPAAGTRATTCTPSPTQMRLMLQSTDDLPLNFGFTGKGSSSK---PDELHE 480 (840)
T ss_dssp -H---------HHHHHHHHTEEEEEEECSSSCHHHHHSSCCCSHHHHHHHHHHTTTSSSEEEEEEECCCSS---SHHHHH
T ss_pred -C---------chHHHHHhhHHHHHhCCCceecCcccccccchHHHHHHHHhhhhcceeEEEEeCCCCccc---HHHHHH
Confidence 1 1345688999999976432211 222333333333334445555444333222 344555
Q ss_pred HHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCc-ccccccCChhhHH
Q 009410 191 MVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP-EGHALSRPPLLEG 269 (535)
Q Consensus 191 ~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~ 269 (535)
+. ..|+.++|.+..+ ..+++.+.+.+..+++++.++.+|.+.........+.+........ ..|.. ......
T Consensus 481 l~-~aGa~g~K~~~~~----~~t~~~i~~aL~~A~e~g~~V~ih~e~~~~~~~vee~laA~~g~~~h~~~~e-~~~~~~- 553 (840)
T 4gy7_A 481 II-KAGAMGLKLHEDW----GSTPAAIDNCLTIAEHHDIQINIHTDTLNEAGFVEHSIAAFKGRTIHTYHSE-GAGGGH- 553 (840)
T ss_dssp HH-HHTCSEEEEETTT----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTT-STTSCS-
T ss_pred hh-hceeeEEEecccc----CCCHHHHHHHHHHHHHhCCEEEEeccCcchhHHHHHHHHhhcCCcccceecc-cccccc-
Confidence 55 6799999987654 3578999999999999999999998665432222222211111111 00100 000000
Q ss_pred HHHHHHHHHHHhcCCCEEEEEccC------HH-HHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCC
Q 009410 270 EATTRAIRLAEFVNTPLYVVHVMS------MD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPP 342 (535)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~H~~~------~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 342 (535)
+.+.....+....+.+... .. ..+.+...... +++ +.... ....+...++
T Consensus 554 -----A~dii~~~~~a~~l~~~t~~~~~~~~~~~~e~l~~~~~~----------~~l--~~~i~------ed~~~~~s~~ 610 (840)
T 4gy7_A 554 -----APDIIKVCGIKNVLPSSTNPTRPLTSNTIDEHLDMLMVC----------HHL--DREIP------EDLAFAHSRI 610 (840)
T ss_dssp -----TTTGGGGGGCTTEEEEEESTTSSCBTTHHHHHHHHHHHH----------TTC--CTTSH------HHHHHHHHHS
T ss_pred -----chHHHHHhhcccceeeEeeccchhhhhhhhhhheeEEee----------ecc--Cccch------hhhhhccCcC
Confidence 0000011111111111100 00 00111111100 000 00000 0001111111
Q ss_pred CCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHH------HHhcCCCCHHHHHHHH
Q 009410 343 IRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDT------MVESGQISVTDYVRLT 416 (535)
Q Consensus 343 ~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~------~~~~~~ls~~eal~~~ 416 (535)
.+. .......+.+.|+..+++||+.+.....+.. ....+......... .....+++++++|+++
T Consensus 611 ~~~--~~a~~~ll~dlGvi~~isSD~~p~~~~~e~~--------~~~~~~a~~~~~~~g~~~~e~~~~~~Lsl~eAIr~a 680 (840)
T 4gy7_A 611 RKK--TIAAEDVLNDIGAISIISSDSQAMGRVGEVI--------SRTWQTADKMKAQTGPLKCDSSDNDNFRIRRYIAKY 680 (840)
T ss_dssp CHH--HHHHHHHHHHTTSSCEEECCBTTTBCGGGHH--------HHHHHHHHHHHHHHCSCTTSCSSCCHHHHHHHHHTT
T ss_pred Ccc--chhHHHHHHhCCCeEEEeccccccccccccc--------hhhhcccccchhhcccchhhhhhcCCCCHHHHHHHH
Confidence 111 1122334556799999999987765433210 00000000000000 0124458999999999
Q ss_pred hHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEEC-Ceecc
Q 009410 417 STECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN-DELNV 493 (535)
Q Consensus 417 T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~-~~~~~ 493 (535)
|+|||++||+++++|+|++||+|||||||+..+ ..++++|+++|++||.. |.-..
T Consensus 681 TiNPAraLGLddr~GSIEpGK~ADLVLfDPa~F----------------------GvKPe~Vik~G~Iv~~~~gd~~~ 736 (840)
T 4gy7_A 681 TINPAIANGFSQYVGSVEVGKLADLVMWKPSFF----------------------GTKPEMVIKGGMVAWADIGDPNA 736 (840)
T ss_dssp THHHHHHHTCTTTSSSSCTTSBCCEEEECGGGT----------------------TTCCSEEEETTEEEEEEECCTTS
T ss_pred HHHHHHHhCCCCCccccCCCCcceEEEECchHc----------------------CCCCeEEEECCEEEEcCCCCCCc
Confidence 999999999999999999999999999985422 23789999999999854 44444
No 56
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=100.00 E-value=5.4e-32 Score=275.90 Aligned_cols=363 Identities=17% Similarity=0.172 Sum_probs=208.5
Q ss_pred CcccEEEEccEEEcCCCc-eeeeEEEeCCEEEEeeCCCCCCCCceEEecC-CCEEeeccccccccccccc-CCCCchhhh
Q 009410 51 SSSKILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDAT-GKFVMPGGIDPHTHLAMEF-MGSETIDDF 127 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~~-~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~-G~~vlPGlID~H~H~~~~~-~g~~~~~~~ 127 (535)
|+++++|+|++|++++.. .+++|+|+||+|++|++..+...+.++||++ |++|+|||||+|+|+.... .+..+++++
T Consensus 1 m~~~~li~~~~v~~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~ 80 (396)
T 2vhl_A 1 MAESLLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKEPYSKEIQAPADSVLLPGMIDIHIHGGYGADTMDASFSTL 80 (396)
T ss_dssp --CCEEEEEEEEECSSCEEEEEEEEEETTEEEEEESSCCSSCCSEEEECCTTCEEEECEEEEEECEETTEEGGGCSHHHH
T ss_pred CCccEEEEeeEEEcCCccccCceEEEECCEEEEEECCCCCCCCCceEcCCCCCEEcCCEEEEeecCCcCccccCCCHHHH
Confidence 356799999999998764 5789999999999999321111346899999 9999999999999997641 012456777
Q ss_pred HHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcc------cccccceeeeeec-------------CChhhHHH
Q 009410 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN------SCMDYGFHMAITK-------------WDEVVSDE 187 (535)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-------------~~~~~~~~ 187 (535)
+...++++++||||++|+....+. .....++...+.... ....++++..... ......+.
T Consensus 81 ~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 160 (396)
T 2vhl_A 81 DIMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEGPFVSPKRAGAQPKEWIRPSDVEL 160 (396)
T ss_dssp HHHHHHGGGGTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCSGGGSSSEEEEEEEECSSSCGGGCTTSCGGGCCCCCHHH
T ss_pred HHHHHHHHcCCeeEEEecccCCCHHHHHHHHHHHHHHHhcccccccccceEEEeeecCccCccccCCCCHHHccCCCHHH
Confidence 778888999999999999643222 122233333332221 1111222211100 00112455
Q ss_pred HHHHHHHcCCCEEEEEe-ecCCCCcCCHHHHHHHHHHHHhcCCeEEE-EcCC-hhhHHHHHHHHHHcCCCCcccccccCC
Q 009410 188 MEVMVKEKGINSFKFFM-AYKGSFMINDELLIEGFKRCKSLGALAMV-HAEN-GDAVFEGQKRMIELGITGPEGHALSRP 264 (535)
Q Consensus 188 ~~~~~~~~g~~~ik~~~-~~~~~~~~~~~~l~~~~~~a~~~g~~v~~-H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (535)
++++. ..+.+.+|++. .+... ...++++.|+++|+++.. |+.. ..... ...+.|...+.+......
T Consensus 161 ~~~~~-~~~~~~ik~~~~~p~~~------~~~~~~~~a~~~g~~v~~gH~~~~~~~~~----~a~~~G~~~i~H~~~~~~ 229 (396)
T 2vhl_A 161 FKKWQ-QEAGGLIKIVTLAPEED------QHFELIRHLKDESIIASMGHTDADSALLS----DAAKAGASHMTHLYNAMS 229 (396)
T ss_dssp HHHHH-HHTTTCEEEEEECGGGS------GGGHHHHHHHHTTCEEEECSBCCCHHHHH----HHHHTTCCEESSTTSSBC
T ss_pred HHHHH-HhcCCcceEEEECCCCC------CHHHHHHHHHHCCCEEeecccCCCHHHHH----HHHHcCCCEeEeCCccCc
Confidence 66665 45667777442 22211 123678889999999988 9963 43332 334456542222111111
Q ss_pred hhhHHHHHHHHHHHHHhcCCCE---EEEEccCHHHHHHHHHHHHc-CC-cEEeccccceEeeCcccccCcCccccceeEE
Q 009410 265 PLLEGEATTRAIRLAEFVNTPL---YVVHVMSMDAMEEIAKARKA-GQ-RVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (535)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~---~~~H~~~~~~~~~~~~~~~~-g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (535)
... ... ..++.. .....++ .+.|+..... +.++.+.+. +. .+..++.. . ....... ..+..
T Consensus 230 ~~~-~~~-~G~~~~-~~~~~~~~~e~~~h~~~l~~-~~~~~~~~~~~~~~~~~~~~~--~-------~~~g~~~-~~~~~ 295 (396)
T 2vhl_A 230 PFH-HRE-PGVIGT-ALAHDGFVTELIADGIHSHP-LAAKLAFLAKGSSKLILITDS--M-------RAKGLKD-GVYEF 295 (396)
T ss_dssp CCC-SSS-CHHHHH-HHHCTTCEEEEECSSSSSCH-HHHHHHHHHHCTTSEEEECCB--C-------TTTTSCS-EEEEE
T ss_pred ccc-cCC-CCchhh-hhcCCCcEEEEcCCccccCH-HHHHHHHhhcCCccEEEECcC--h-------hhcCCCC-ceEEE
Confidence 000 000 000000 0001122 3456554433 445555554 54 35444332 0 0000000 11111
Q ss_pred cCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHH
Q 009410 340 SPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTE 419 (535)
Q Consensus 340 ~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~ 419 (535)
.| +..+.++| .+.+ +|+....... .+...++.+++..++|++++|+++|.|
T Consensus 296 ~~----------~~~~~~~g-~~~~-~d~~~~g~~~-----------------~l~~~l~~~~~~~~~~~~~~l~~aT~~ 346 (396)
T 2vhl_A 296 GG----------QSVTVRGR-TALL-SDGTLAGSIL-----------------KMNEGARHMREFTNCSWTDIANITSEN 346 (396)
T ss_dssp TT----------EEEEEETT-EEEC-TTSCBCSBCC-----------------CHHHHHHHHHHHHCCCHHHHHHHHTHH
T ss_pred CC----------eEEEEECC-EEEe-CCCccccccc-----------------CHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 11 11123456 5555 5543221111 223333344444579999999999999
Q ss_pred HHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeec
Q 009410 420 CARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELN 492 (535)
Q Consensus 420 ~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~ 492 (535)
||++||+++++|+|++||+|||||+|.+ .+|+.||++|++|++++++-
T Consensus 347 ~A~~lgl~~~~G~i~~G~~ADlvv~d~~-------------------------~~v~~v~~~G~~v~~~~~~~ 394 (396)
T 2vhl_A 347 AAKQLGIFDRKGSVTVGKDADLVIVSSD-------------------------CEVILTICRGNIAFISKEAD 394 (396)
T ss_dssp HHHHHTCTTTSSSCCTTSBCCEEEECTT-------------------------CCEEEEEETTEEEEECSCCC
T ss_pred HHHHhCCcCCCceeCCCCcCCEEEECCC-------------------------CcEEEEEECCEEEEeccccc
Confidence 9999999777999999999999999975 37999999999999998763
No 57
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=100.00 E-value=5.5e-31 Score=267.86 Aligned_cols=352 Identities=20% Similarity=0.232 Sum_probs=204.5
Q ss_pred ccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCCCCC--CCCceEEecCCCEEeecccccccccccccCCC-CchhhhHH
Q 009410 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS-ETIDDFFS 129 (535)
Q Consensus 53 ~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~~~~--~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~-~~~~~~~~ 129 (535)
..++|+|++|++++....++|+|+||+|++|++.... +.+.++||++|++|+|||||+|+|+....... ........
T Consensus 8 ~~~~i~n~~v~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~ 87 (390)
T 1onw_A 8 GFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEV 87 (390)
T ss_dssp CCEEEESCEEESSSEEEECEEEEETTEEEEEETTCCTTSSSSCEEEECTTCEEEECEEEEEECTTCCBCTTSGGGBCCCC
T ss_pred ceEEEECcEEECCCCCccceEEEECCEEEEEecCcccCCCCCCeEEeCCCCEECcCeeEeeECccccCccccccccCHHH
Confidence 4689999999998766678999999999999976432 23568999999999999999999986431000 00111112
Q ss_pred HHHHHHhCCcEEEeccccCCCC--Ch---HHHHHHHHHHhcccccccceee-eeecCChhhHHHHHHHHHHcCCCEEEEE
Q 009410 130 GQAAALAGGTTMHIDFVIPING--SL---TAGFEAYEKKAKNSCMDYGFHM-AITKWDEVVSDEMEVMVKEKGINSFKFF 203 (535)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~ik~~ 203 (535)
....++++||||++++...... .. ....+.....+.+.....+.+. ............+. .. .....+++.
T Consensus 88 ~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~-~~--~~~~g~~~~ 164 (390)
T 1onw_A 88 ALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVA-II--DRVIGVKCA 164 (390)
T ss_dssp CHHHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHTSEEEEEEECSCSSCCCSSSCHHHHHH-HC--TTEEEEEEE
T ss_pred HHHHHHHCCeeEEecCCCcccccCcHHHHHHHHHHHHhcCCceEEeccccCCCchhhhhhhcchhh-hH--HHhhcceee
Confidence 3577899999999998644322 11 1222222222222111111110 00111111112111 11 111223565
Q ss_pred eecCCCCcCCHHHHHHHHHHHHhcCC------eEEEEc-CChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHH
Q 009410 204 MAYKGSFMINDELLIEGFKRCKSLGA------LAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAI 276 (535)
Q Consensus 204 ~~~~~~~~~~~~~l~~~~~~a~~~g~------~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 276 (535)
+.+......+.+.+.++++.++..+. .+.+|. ++....... ..+.+.|.....
T Consensus 165 ~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~~~~~~~~~~~-~~~~~~g~~~v~------------------- 224 (390)
T 1onw_A 165 ISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPI-YDLLENCDVPIS------------------- 224 (390)
T ss_dssp ESSTTSCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEECSCTTTTHHH-HHHHHTCCCCGG-------------------
T ss_pred ecCCCCCCCCHHHHHHHHHHHhhhhhhhccCceEEEEeCCCHHHHHHH-HHHHhccCCceE-------------------
Confidence 55555556788999999888876543 367787 333222222 122122211100
Q ss_pred HHHHhcCCCEEEEEccCHHHH--HHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHH
Q 009410 277 RLAEFVNTPLYVVHVMSMDAM--EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQA 354 (535)
Q Consensus 277 ~~~~~~~~~~~~~H~~~~~~~--~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~ 354 (535)
.++..|+...... +.++.+++.+.....++. .|+ ..+...++.
T Consensus 225 --------~l~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~---~~~~~~l~~ 269 (390)
T 1onw_A 225 --------KLLPTHVNRNVPLFEQALEFARKGGTIDITSSI------------------------DEP---VAPAEGIAR 269 (390)
T ss_dssp --------GEEEECGGGSHHHHHHHHHHHHTTCCEEEETTC------------------------CSS---SCHHHHHHH
T ss_pred --------EeeccccccCHHHHHHHHHHHhcCCcccccccc------------------------CCC---CcCHHHHHH
Confidence 1123454322111 344445544432222211 111 134577999
Q ss_pred HHhcCCe---EEEeCCCCCCChhhhhcCCCCcccCcc---hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCC
Q 009410 355 ALATGIL---QLVGTDHCAFNSTQKAFGIDDFRKIPN---GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYP 428 (535)
Q Consensus 355 ~l~~Gv~---~~lgtD~~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~ 428 (535)
++++|++ ++++||+.+....... .....+. +....+..+. .+++..+++++++++++|.|||++||+ +
T Consensus 270 ~~~~g~~~d~i~l~TD~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~t~npA~~~gl-~ 343 (390)
T 1onw_A 270 AVQAGIPLARVTLSSDGNGSQPFFDD----EGNLTHIGVAGFETLLETVQ-VLVKDYDFSISDALRPLTSSVAGFLNL-T 343 (390)
T ss_dssp HHHTTCCGGGEEEECCBTCC-----------------CCCCSHHHHHHHH-HHHHHHCCCHHHHHGGGTHHHHHHTTC-T
T ss_pred HHHcCCCccceEEEccCCCCCcccCC----ccccccccCCCHHHHHHHHH-HHHHHcCCCHHHHHHHHhHHHHHHhCC-C
Confidence 9999985 7999998643211000 0000111 2233333333 455556799999999999999999999 4
Q ss_pred CCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecc
Q 009410 429 RKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNV 493 (535)
Q Consensus 429 ~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~ 493 (535)
++|+|++|++|||||+|.+ . .|..||++|++|+++|+++.
T Consensus 344 ~~G~i~~G~~ADlvv~d~~-~------------------------~v~~v~~~G~~v~~~g~~~~ 383 (390)
T 1onw_A 344 GKGEILPGNDADLLVMTPE-L------------------------RIEQVYARGKLMVKDGKACV 383 (390)
T ss_dssp TCSSCCTTSBCCEEEECTT-C------------------------CEEEEEETTEEEEETTEESS
T ss_pred CCcccCCCCcCCEEEEcCC-C------------------------cEEEEEECCEEEEECCeEcc
Confidence 6899999999999999965 1 57899999999999999885
No 58
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=99.98 E-value=1.8e-31 Score=279.15 Aligned_cols=329 Identities=17% Similarity=0.179 Sum_probs=213.0
Q ss_pred cEEEEccEEEcCCCc--eeeeEEEeCCEEEEeeCCCCC-----CCCceEEecCCCEEeecccccccccccc--------c
Q 009410 54 KILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINV-----GDDVKVLDATGKFVMPGGIDPHTHLAME--------F 118 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~--~~~~I~I~~G~I~~Vg~~~~~-----~~~~~vID~~G~~vlPGlID~H~H~~~~--------~ 118 (535)
+++|+|++|+|+++. ...+|+|+||||++||+.... ..++++||++|++|+|||||+|+|+... +
T Consensus 37 ~~li~ng~I~t~~~~~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~dl 116 (534)
T 3icj_A 37 MKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDL 116 (534)
T ss_dssp EEEEESSEEEEEETTEEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSEEC
T ss_pred CEEEECCEEECCCCCCceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCccCC
Confidence 489999999998765 478999999999999986432 2358899999999999999999997542 0
Q ss_pred C------------------------------------------------------------------CC-----------
Q 009410 119 M------------------------------------------------------------------GS----------- 121 (535)
Q Consensus 119 ~------------------------------------------------------------------g~----------- 121 (535)
. |.
T Consensus 117 ~~~~s~~e~~~~l~~~~~~wi~g~G~~~~~~~~~pt~~~LD~~~~Pv~l~~~~~H~~~~Ns~AL~~~gi~~t~~p~G~tG 196 (534)
T 3icj_A 117 RGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNLKPSKDFDESTG 196 (534)
T ss_dssp TTCCSHHHHHHHHHTCCSSSEEEEEECHHHHSSCCCHHHHTTSSSCEEEEETTSSEEEECHHHHHHHCCCCCTTEETTTT
T ss_pred CCCCCHHHHHHHHHHHHhhCEEEcccCHHHhcCCCCHHHHhhCCCeEEEEecCCcHhHHhHHHHHHcCCCCCCCCCCCCc
Confidence 0 00
Q ss_pred -----------------C-chhh----hHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeec
Q 009410 122 -----------------E-TIDD----FFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK 179 (535)
Q Consensus 122 -----------------~-~~~~----~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (535)
. +.+. +......+++.|||++.|+... ....+.++...+.+ +..+++..+...
T Consensus 197 ~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~~--~~~~~~~~~l~~~g-~l~~rv~~~~~~-- 271 (534)
T 3icj_A 197 IVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVG--EKALKALFELEREG-RLKMNVFAYLSP-- 271 (534)
T ss_dssp EEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEEC--HHHHHHHHHHHHTT-CCCSEEEEEECG--
T ss_pred eeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCCC--HHHHHHHHHHHhCC-CCcEEEEEecCH--
Confidence 0 1111 1233445678999999998533 12233333333322 233333222111
Q ss_pred CChhhHHHHHHHHH------HcCCCEEEEEeec-------------------CCCCcCCHHHHHHHHHHHHhcCCeEEEE
Q 009410 180 WDEVVSDEMEVMVK------EKGINSFKFFMAY-------------------KGSFMINDELLIEGFKRCKSLGALAMVH 234 (535)
Q Consensus 180 ~~~~~~~~~~~~~~------~~g~~~ik~~~~~-------------------~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (535)
+..+.+.+... .....++|++.+. .|...++++.++++++.|++.|+++.+|
T Consensus 272 ---~~~~~~~~~~~~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~~~~e~l~~~v~~A~~~G~~v~~H 348 (534)
T 3icj_A 272 ---ELLDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVIERAKPLGLDVAVH 348 (534)
T ss_dssp ---GGHHHHHHHTCCSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCSSCHHHHHHHHHHHTTTTCEEEEE
T ss_pred ---HHHHHHHHhccccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 22333322210 0124567888663 1334578999999999999999999999
Q ss_pred cCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEecc
Q 009410 235 AENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEP 314 (535)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~ 314 (535)
+.++..+...++.+.+. +.+..+.|+...+. ++++++++.|+.++.+|
T Consensus 349 a~gd~ai~~~l~a~~~~-------------------------------~~r~~ieH~~~~~~-e~i~~la~~gv~~~~~P 396 (534)
T 3icj_A 349 AIGDKAVDVALDAFEEA-------------------------------EFSGRIEHASLVRD-DQLERIKELKVRISAQP 396 (534)
T ss_dssp ECSHHHHHHHHHHHHHH-------------------------------TCCCEEEECCBCCH-HHHHHHHHHTCEEEECT
T ss_pred EcChHHHHHHHHHHHhc-------------------------------cCCCEEEECCCCCH-HHHHHHHHcCCeEEEcc
Confidence 99877666555443221 14567999998887 89999999999988877
Q ss_pred ccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHH
Q 009410 315 VVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERM 394 (535)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l 394 (535)
..... +. .+. ..+.. .... ...+++.++++ +++++|||+...+.+ +|. .+
T Consensus 397 ~~~~~--~~-~~~-~~lg~-~r~~---------~~~p~~~l~~~-v~valGSD~p~~~~~-------p~~--------~~ 446 (534)
T 3icj_A 397 HFIVS--DW-WIV-NRVGE-ERAK---------WAYRLKTLSSI-TKLGFSTDSPIEPAD-------PWV--------SI 446 (534)
T ss_dssp THHHH--CT-THH-HHHHH-HHGG---------GBTCHHHHHHH-SCEEECCTTTTSCCC-------HHH--------HH
T ss_pred ccccc--hh-HHH-HhhCH-HHHh---------ccHHHHHHHHh-CCEEeecCCCCCCCC-------HHH--------HH
Confidence 63210 00 000 00000 0000 00238889999 999999996432211 222 11
Q ss_pred HHHHHH--HHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeee
Q 009410 395 HLVWDT--MVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEIT 453 (535)
Q Consensus 395 ~~~~~~--~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~ 453 (535)
...... +....++|++|||+++|.|+|+++|++ ++|+|++||.|||||+|.|++..++
T Consensus 447 ~~av~r~~~~~~~~ls~~eaL~~~T~~~A~~lg~e-~~GsLe~Gk~ADlvvld~dpl~~~~ 506 (534)
T 3icj_A 447 DAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAE-DLGKLERGFRAEYIILDRDPLKEMK 506 (534)
T ss_dssp HHHHHCCSSCGGGCCCHHHHHHHTTHHHHHHTTCT-TCSCCSTTSBCCEEEESSCTTC---
T ss_pred HHHHhccccCcccCCCHHHHHHHHHHHHHHHhCCC-CCeEECCCCCcCEEEECCChhhccc
Confidence 111111 123567999999999999999999998 9999999999999999998765543
No 59
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=99.98 E-value=2.1e-32 Score=281.03 Aligned_cols=343 Identities=14% Similarity=0.061 Sum_probs=202.4
Q ss_pred cccEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCC---CCCceEEecCCCEEeecccccccccccccC-C-----
Q 009410 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G----- 120 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~---~~~~~vID~~G~~vlPGlID~H~H~~~~~~-g----- 120 (535)
+.+++|+|++|++++. ..+++|+|+||||++|++.... +.+.++||++ ++|+|||||+|+|+..... +
T Consensus 36 ~~~~li~n~~v~~~~~~~~~~~~V~I~~g~I~~vg~~~~~~~~~~~~~viD~~-~~v~PGlID~H~H~~~~~~~g~~~~~ 114 (420)
T 2imr_A 36 HTPRLLTCDVLYTGMGGAQSPGGVVVVGETVAAAGHPDELRRQYPHAAEERAG-AVIAPPPVNAHTHLDMSAYEFQALPY 114 (420)
T ss_dssp CCEEEEEESEEECC---EESSEEEEEETTEEEEEECHHHHHHHCTTCEEEECC-SEESSCCCEEEEESSCCHHHHHHCHH
T ss_pred cccEEEECCEEEeCCCCeeeccEEEEECCEEEEecCcccccccCCCCeeecCC-eEECCCCEecCcCcchhhhhhccCCH
Confidence 3568999999999874 3578999999999999975321 1357899999 9999999999999875310 0
Q ss_pred --C-----------CchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHH-HHHHhcccccccceeeeeecC-ChhhH
Q 009410 121 --S-----------ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEA-YEKKAKNSCMDYGFHMAITKW-DEVVS 185 (535)
Q Consensus 121 --~-----------~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~ 185 (535)
. ..+.........++++||||++|+... ...++. ..+.+.+....+++.. .... ..+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~g~r~~~~~~~~~-~~~~~~~~~~ 188 (420)
T 2imr_A 115 FQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDIVWA-----PEVMDALLAREDLSGTLYFEVLN-PFPDKADEVF 188 (420)
T ss_dssp HHTSHHHHHHHTTCCHHHHHHHHHHHHHHTTCCCEEEEECS-----HHHHHHHHTCTTCCEEEEEEECB-CCGGGHHHHH
T ss_pred HHHHHHhhhhhhhccCHHHHHHHHHHHHhcCcEEEEEccCC-----HHHHHHHHHhcCcEEEEEeeecC-CCchhhHHHH
Confidence 0 000112345567899999999998632 122321 1111222222111111 0000 01122
Q ss_pred HHHHHHHH---HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChh-hHHHHHHHHHHcCCC-------
Q 009410 186 DEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELGIT------- 254 (535)
Q Consensus 186 ~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~-~~~~~~~~~~~~g~~------- 254 (535)
++..++.+ ..+.+.++++..+.+....+.+.++++++.|++.|+++.+|+.... ......+ ..|..
T Consensus 189 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~---~~g~~~~~~~~~ 265 (420)
T 2imr_A 189 AAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRT---GGGPLWDNRMPA 265 (420)
T ss_dssp HHHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCBEEEESCSHHHHHHHHH---SCSTTGGGSCGG
T ss_pred HHHHHHHHHHhcccCCceEEEecCCcCCCcCHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHH---hhcccccccccc
Confidence 23333332 2234567887777766778999999999999999999999996443 3332221 11110
Q ss_pred -Cccccc--ccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCc
Q 009410 255 -GPEGHA--LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDF 331 (535)
Q Consensus 255 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 331 (535)
.+..+. ..++.......+..+.+ ....+.+..+.|+..... +.++.+++.|+.+..||....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~l~~~~~i~H~~~l~~-~~i~~l~~~g~~~~~~p~~~~------------- 330 (420)
T 2imr_A 266 LYPHTLAEVIGREPGPDLTPVRYLDE-LGVLAARPTLVHMVNVTP-DDIARVARAGCAVVTCPRSNH------------- 330 (420)
T ss_dssp GSCSSHHHHHTSCCCTTCCHHHHHHH-HTCGGGCCEEEECCSCCH-HHHHHHHHHTCCEEECHHHHH-------------
T ss_pred chhhhhhhhccccccCCCCHHHHHHH-cCCCCCCeEEEecCcCCH-HHHHHHHHcCCeEEECHHHHH-------------
Confidence 000000 00000000001111111 112233456788876655 678888888988777765311
Q ss_pred cccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHH
Q 009410 332 VTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTD 411 (535)
Q Consensus 332 ~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~e 411 (535)
..+. ..+| +++++++|+++++|||+.+...... . ...+..+.. ...++|+++
T Consensus 331 ~~~~---~~~~---------l~~~~~~Gv~~~lgtD~~~~~~~~~-----~--------~~~~~~~~~---~~~~ls~~~ 382 (420)
T 2imr_A 331 HLEC---GTFD---------WPAFAAAGVEVALGTDSVASGETLN-----V--------REEVTFARQ---LYPGLDPRV 382 (420)
T ss_dssp HTTC---CCCC---------HHHHHHTTCCEEECCCCHHHHSCSC-----T--------HHHHHHHHH---HCTTSCHHH
T ss_pred Hhcc---CCCC---------HHHHHHCCCeEEEECCCCccCCCCC-----H--------HHHHHHHHh---cCCCCCHHH
Confidence 1111 1223 7789999999999999743211110 1 112222221 135799999
Q ss_pred HHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCC
Q 009410 412 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS 448 (535)
Q Consensus 412 al~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~ 448 (535)
+|+++|.|||+++|+++++|+|++||+||| |+|+++
T Consensus 383 al~~aT~n~A~~lgl~~~~GsL~~Gk~ADl-vvd~~~ 418 (420)
T 2imr_A 383 LVRAAVKGGQRVVGGRTPFLRRGETWQEGF-RWELSR 418 (420)
T ss_dssp HHHHHHHHHHHHHC--CCCCSTTSBCCGGG-BGGGCC
T ss_pred HHHHHHHHHHHHhCCCCCceeeCCCCccCE-EEECCC
Confidence 999999999999999878999999999999 677663
No 60
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=99.98 E-value=1.3e-30 Score=263.07 Aligned_cols=352 Identities=16% Similarity=0.173 Sum_probs=196.4
Q ss_pred cEEEEccEEEcCCCc---eeeeEEEeCCEEEEeeCCCC-CCCCceEEecCCCEEeecccccccccccccCCC-Cc----h
Q 009410 54 KILIKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNIN-VGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS-ET----I 124 (535)
Q Consensus 54 ~~vi~n~~vi~~~~~---~~~~I~I~~G~I~~Vg~~~~-~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~-~~----~ 124 (535)
.++|+|++|+|+.+. ++++|+|+||||++||+... .++++++||++|++|+|||||+|+|+....... .. .
T Consensus 3 ~~aI~narviD~~~g~~i~~~~V~I~dG~I~~Ig~~~~~~~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~ 82 (403)
T 3mtw_A 3 IKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAVPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLEYS 82 (403)
T ss_dssp EEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTCCCCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGGGGGSC
T ss_pred cEEEEceEEEECCCCcEecCcEEEEECCEEEEEeCCCCCCCCCCEEEECCCCEEEeChheeeeCCccccccCcccccccc
Confidence 478999999998753 68999999999999998754 356789999999999999999999987651110 00 1
Q ss_pred hhhH-----HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcc-cc--cccceeee-----------------eec
Q 009410 125 DDFF-----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN-SC--MDYGFHMA-----------------ITK 179 (535)
Q Consensus 125 ~~~~-----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~-----------------~~~ 179 (535)
.... ......+..|+|+..+....... ............. .. ........ ...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (403)
T 3mtw_A 83 DRFWSVVQTANAKKTLEAGFTTVRNVGAADYD--DVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNP 160 (403)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECCCSTTH--HHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCT
T ss_pred HHHHhhhhhhhhhhccccccceeecccccccc--chhhhhhhhccccccccccccccccccccccccccccccccccccc
Confidence 1111 12234577899999877543221 1111111111111 00 00000000 000
Q ss_pred C----ChhhHHHHHHHHHHcCCCEEEEEeec--------CCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHH
Q 009410 180 W----DEVVSDEMEVMVKEKGINSFKFFMAY--------KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (535)
Q Consensus 180 ~----~~~~~~~~~~~~~~~g~~~ik~~~~~--------~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~ 247 (535)
. ..+......... ..+....+..... ........+.+.++++.|++.+.++..|...........
T Consensus 161 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-- 237 (403)
T 3mtw_A 161 FNSDSPDEARKAVRTLK-KYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIREAV-- 237 (403)
T ss_dssp TCCCSHHHHHHHHHHHH-HTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHH--
T ss_pred cccchhHHHhhhhHhhh-hhcchhhhhhhccccccccccccccccCHHHHHHHHHHHHHcCCeEEEEeccchhHHHHH--
Confidence 0 011222222222 4555555544321 123345789999999999999999999997765433322
Q ss_pred HHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCccccc
Q 009410 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW 327 (535)
Q Consensus 248 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 327 (535)
..+............ ........ . . ....+...... .........+.....+...
T Consensus 238 --~~~~~~~~~~~~~~~-----~~~~~~~~---~-~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------- 292 (403)
T 3mtw_A 238 --RAGVDTIEHASLVDD-----EGIKLAVQ---K-G--AYFSMDIYNTD-YTQAEGKKNGVLEDNLRKD----------- 292 (403)
T ss_dssp --HTTCSEEEECTTCCH-----HHHHHHHH---H-T--CEEECCCSTHH-HHHHHHHHHTCCHHHHHHH-----------
T ss_pred --Hhccccccccccccc-----chhhhhcc---c-c--ceeeeeeccch-hhhhhhhccccchhhcccc-----------
Confidence 223221110000000 00000000 0 0 11112111111 2222222222111100000
Q ss_pred CcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCC
Q 009410 328 HSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQI 407 (535)
Q Consensus 328 ~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~l 407 (535)
.............++++|+.+.+|||.......... ..+.. ++ +.|+
T Consensus 293 --------------~~~~~~~~~~~~~~~~~g~~~~~gt~~~~~~~~~~~--------------~~~~~----~~-~~gl 339 (403)
T 3mtw_A 293 --------------RDIGELQRENFRKALKAGVKMVYGTDAGIYPHGDNA--------------KQFAV----MV-RYGA 339 (403)
T ss_dssp --------------HHHHHHHHHHHHHHHHHTCEEECCCCBTTBCTTCGG--------------GHHHH----HH-HTTC
T ss_pred --------------ccccccccchhhHHHhcCCeEeeccCCcccccchHH--------------HHHHH----HH-HcCC
Confidence 000001123466788899999999996543322110 12222 22 4579
Q ss_pred CHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEE
Q 009410 408 SVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVV 485 (535)
Q Consensus 408 s~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V 485 (535)
|++|||+++|.|||++||+++++|+|++||+|||||+|.||+.++. ...+|++||++||+|
T Consensus 340 s~~eal~~~T~npA~~lgl~~~~GsI~~G~~ADlvvld~dPl~di~-----------------~~~~v~~Vi~~G~vv 400 (403)
T 3mtw_A 340 TPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGDPLADVT-----------------TLEKPVFVMKGGAVV 400 (403)
T ss_dssp CHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSCTTTCGG-----------------GGGSCSEEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHhCCCCCceeeCCCCcceEEEECCChhHhHh-----------------hhcCcCEEEECCEEE
Confidence 9999999999999999999989999999999999999988553332 235789999999975
No 61
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=99.97 E-value=3.4e-31 Score=263.66 Aligned_cols=328 Identities=13% Similarity=0.126 Sum_probs=240.9
Q ss_pred CCCEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhc-cccccccee--
Q 009410 99 TGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFH-- 174 (535)
Q Consensus 99 ~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~-- 174 (535)
++++|+||+||+|+|+... . .......++++||||++||.+..+. ...+.++.+..... ....++.++
T Consensus 4 ~~~~v~PG~ID~HvH~~~g---~-----~~~e~~aa~~gGvTtvv~mpnt~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (347)
T 2z26_A 4 SQVLKIRRPDDWHLHLRDG---D-----MLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPL 75 (347)
T ss_dssp CCEEEEECCCEEEECCCSH---H-----HHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHTSCTTCCCEEE
T ss_pred CCeEECCCcceeeecCCCC---C-----chhhHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHhcccCCcccEEEE
Confidence 4689999999999999752 1 1223477899999999999754333 33444544444432 223223333
Q ss_pred eeeecCChhhHHHHHHHHHHcCC-CEEEEEeecC----CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHH
Q 009410 175 MAITKWDEVVSDEMEVMVKEKGI-NSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMI 249 (535)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~g~-~~ik~~~~~~----~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~ 249 (535)
..+....+...+++..+. +.|+ .++|+|+.+. +....+.+.+.++++.+++.|.++.+|+++....
T Consensus 76 ~~~~~~~~~~~~ei~~l~-~~G~~~g~K~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~-------- 146 (347)
T 2z26_A 76 MTCYLTDSLDPNELERGF-NEGVFTAAKLYPANATANSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHAD-------- 146 (347)
T ss_dssp EEEECCTTCCHHHHHHHH-HTTSEEEEEECCCCTTCCTTTCCSCGGGGHHHHHHHHHHTCCEEECCCCCCTT--------
T ss_pred EEEEeCCCCCHHHHHHHH-HCCCeEEEEEeecCCcCCCCCccCCHHHHHHHHHHHHHhCCEEEEEecCCccc--------
Confidence 333222222356777777 6787 7999998864 2334578899999999999999999999865310
Q ss_pred HcCCCCcccccccCChhhHHHHHHHHH--HHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCccccc
Q 009410 250 ELGITGPEGHALSRPPLLEGEATTRAI--RLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW 327 (535)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 327 (535)
. .+...+...+.+.+ .+++..+.++|+.|.++.+.++.++. .+.+|++++++|+++++++++.
T Consensus 147 ----~--------~~~~~E~~~~~~~i~~~la~~~~~~~hi~Hvst~~~~~~i~~---ak~~Vt~e~~ph~L~l~~~~~~ 211 (347)
T 2z26_A 147 ----I--------DIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAADYVRD---GNERLAATITPQHLMFNRNHML 211 (347)
T ss_dssp ----S--------CGGGHHHHHHHHTHHHHHHHSTTCCEEECSCCSHHHHHHHHT---SCTTEEEEECHHHHHCCHHHHH
T ss_pred ----c--------CHHHHHHHHHHHHHHHHHHhhcCCcEEEEECCcHHHHHHHHH---hCCCceEeecchHheecHHHhc
Confidence 0 11112444566666 57778899999999999776555554 3468999999999999988774
Q ss_pred CcCccccceeEEcCCCCCcccHHHHHHHHhcCCeE-EEeCCCCCCChhhhhcCCCCcccCcc--hHHHHHHHHHHHHHhc
Q 009410 328 HSDFVTAAKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPN--GIEERMHLVWDTMVES 404 (535)
Q Consensus 328 ~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~-~lgtD~~~~~~~~~~~~~~~~~~~~~--g~~~~l~~~~~~~~~~ 404 (535)
... .+..++++||+|...+++++++.+..|.+. +++|||.|+....+.. +|. .++ |++..+++++. .+ .
T Consensus 212 ~~~--~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~---~~g-~~Gi~~~e~~l~l~~~-~~-~ 283 (347)
T 2z26_A 212 VGG--VRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKES---SCG-CAGCFNAPTALGSYAT-VF-E 283 (347)
T ss_dssp TTS--BCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSS---SSB-CCCCCCTTTHHHHHHH-HH-H
T ss_pred CcC--CCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcC---CCC-CCCcCcHHHHHHHHHH-Hh-h
Confidence 322 356889999999999999999999999988 8999999998776643 333 222 55878888775 44 3
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCC-CCeeEeeEEE
Q 009410 405 GQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVY-EGRRVKGKVE 476 (535)
Q Consensus 405 ~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~-~~~~~~~~v~ 476 (535)
+++|++++++..|.|||++||+.+++|+| +|+ +..|.++.+++.++..|+|| +|+.+.++|.
T Consensus 284 ~~~sl~~~v~~~s~nPAki~gl~~~kG~i--------~l~--~~~~~v~~~~~~s~~~~sPf~~G~~l~g~v~ 346 (347)
T 2z26_A 284 EMNALQHFEAFCSVNGPQFYGLPVNDTFI--------ELV--REEQQVAESIALTDDTLVPFLAGETVRWSVK 346 (347)
T ss_dssp HTTCGGGHHHHHHTHHHHHHTCCCCCCEE--------EEE--CCCEECCSCEECSSSEECCTTTTCEESCEEC
T ss_pred cCCCHHHHHHHHhHhHHHHhCCCCCCCeE--------EEE--cceEEEchhhccccCCcccccCCcEEEeEEe
Confidence 46899999999999999999996567875 677 66799999999999999999 7998888774
No 62
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=99.97 E-value=5.4e-30 Score=254.61 Aligned_cols=109 Identities=17% Similarity=0.191 Sum_probs=85.4
Q ss_pred EEEEccEEEcCCCc-eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccc--cCCCCchhhhHHHH
Q 009410 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME--FMGSETIDDFFSGQ 131 (535)
Q Consensus 55 ~vi~n~~vi~~~~~-~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~--~~g~~~~~~~~~~~ 131 (535)
++|+|++|++++.. .+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|.... +....+.+.+....
T Consensus 5 ~~i~n~~i~~~~~~~~~~~i~I~dG~I~~i~~~~~~~~~~~viD~~G~~v~PGfID~HvHg~~G~~~~d~~~~e~l~~~~ 84 (381)
T 3iv8_A 5 YALTNCKIYTGNDVLVKHAVIINGDKIEAVCPIESLPSEMNVVDLNGANLSPGFIDLQLNGCGGVMFNDEITAETIDTMH 84 (381)
T ss_dssp EEEEEEEEECSSCEESSEEEEEETTEEEEEEEGGGSCTTCEEEEEEEEEEEECEEEEEECEETTEETTTSCSHHHHHHHH
T ss_pred EEEEccEEEcCCCeEeccEEEEECCEEEEEeCCCCCCCCCeEEECCCCEEccCeEeeeecccCCCCCCCCCCHHHHHHHH
Confidence 69999999998765 4679999999999999865545568899999999999999999997643 22334677888888
Q ss_pred HHHHhCCcEEEeccccCCCC-ChHHHHHHHHHH
Q 009410 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKK 163 (535)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~ 163 (535)
+.++++|||+++.+....+. ...+.++.+.+.
T Consensus 85 ~a~~~~GvTt~l~t~~T~~~e~l~~al~~~~~~ 117 (381)
T 3iv8_A 85 KANLKSGCTSFLPTLITSSDENMRQAIAAAREY 117 (381)
T ss_dssp HHHHHTTEEEEEEEEESCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCccccccccCCCCHHHHHHHHHHHHHH
Confidence 99999999999987544433 345555544443
No 63
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.97 E-value=3.4e-32 Score=289.54 Aligned_cols=371 Identities=16% Similarity=0.133 Sum_probs=206.9
Q ss_pred CcccEEEEccEEEcCCCceeeeEEEeCCEEEEeeCC----------CCCCCCceEEecCCCEEeecccccccccccccCC
Q 009410 51 SSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPN----------INVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG 120 (535)
Q Consensus 51 ~~~~~vi~n~~vi~~~~~~~~~I~I~~G~I~~Vg~~----------~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g 120 (535)
...|++|+|++|+|+.++..++|+|+||||++||+. ...++++++||++|++|+|||||+|+|+..+ +
T Consensus 63 ~~~DlvI~Na~Ivd~~Gi~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV~PG~ID~HvH~~~~--~ 140 (566)
T 4ep8_C 63 DCVDLVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAGGIDTHIHWICP--Q 140 (566)
T ss_dssp GSCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEECEEEEEEECSCT--T
T ss_pred CCCCEEEECcEEECCCCeEEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEEEcCEEEecccccCC--C
Confidence 368999999999999888899999999999999963 2235689999999999999999999999866 2
Q ss_pred CCchhhhHHHHHHHHhCCcEEEeccccC-------C-CCChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHH
Q 009410 121 SETIDDFFSGQAAALAGGTTMHIDFVIP-------I-NGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (535)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~d~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (535)
. .......+.++....... . ....................+++++........ .....+.
T Consensus 141 ~---------~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~ 208 (566)
T 4ep8_C 141 Q---------AEEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLLGKGNVSQP---DALREQV 208 (566)
T ss_dssp H---------HHHHHHHTEEEEEEECSSSSHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSCH---HHHHHHH
T ss_pred c---------cchhhhhhHHHHhhCceEEEEecCCCCCchHHHHHHHHHHhccccceeeeeecccccccc---hhhHHHh
Confidence 1 112233455544322111 1 113444455555555556666666655444332 2233333
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHH
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEAT 272 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 272 (535)
..+...++.+..+ .............+...+.....|...........+.....+......+....+.......+
T Consensus 209 -~a~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (566)
T 4ep8_C 209 -AAGVIGLKIHEDW----GATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPDI 283 (566)
T ss_dssp -HHTCSEEEEEGGG----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSSSTTTG
T ss_pred -hhccccccccccc----cccchhhhhHhHHHHHhcchhhhhhhhHHHHHHHHhhHhhccCccccccccccchhHHHHHH
Confidence 5677888776554 34667778888888888999999985543322222222222222211111111111111111
Q ss_pred HHHHHHHHhcCCCEEEEEccCHHHH-HHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHH
Q 009410 273 TRAIRLAEFVNTPLYVVHVMSMDAM-EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (535)
Q Consensus 273 ~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~ 351 (535)
.+..........+.+..|....... +.+.... ..+++..+..... ...+. .. .......
T Consensus 284 ~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~~----------~~h~l~~~~~~~~-------~~~~~--~~-~~~~~~~ 343 (566)
T 4ep8_C 284 ITACAHPNILPSSTNPTLPYTLNTIDEHLDMLM----------VCHHLDPDIAEDV-------AFAES--RI-RRETIAA 343 (566)
T ss_dssp GGGGGCTTEEEEECSTTSSCBTTHHHHHHHHHH----------HHHTCCTTCHHHH-------HHHHH--HC-CHHHHHH
T ss_pred HHHHHHHhhcCCceeehhHHHHHHhhcccceEE----------EeecccCChhhHH-------hhccC--CC-cccchHH
Confidence 1111111100000001111111111 1111111 1111111111100 00000 00 0111233
Q ss_pred HHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcch---HHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCC
Q 009410 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNG---IEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYP 428 (535)
Q Consensus 352 ~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g---~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~ 428 (535)
...++..|....+++|+.+....... +...+.+ ....+..+........+++++++|+++|+|||++||+++
T Consensus 344 ~~~l~~~G~~~~i~sD~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~gls~~eal~~aTiNPAralGL~d 418 (566)
T 4ep8_C 344 EDVLHDLGAFSLTSSDSQAMGRVGEV-----ILRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHGIAH 418 (566)
T ss_dssp HHHHHHHTSSCEECCCTTSSSCTTCH-----HHHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHGGGTHHHHHHTTCTT
T ss_pred HHHHHhCCCcceEeeccccccccccc-----ccccCCCCchHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 55677789999999998876544321 0000100 000000001111234568999999999999999999999
Q ss_pred CCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEE
Q 009410 429 RKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 487 (535)
Q Consensus 429 ~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~ 487 (535)
++|+|++||+|||||||++++ .-++.+|+++|.+||-
T Consensus 419 ~iGSIevGK~ADLVL~Dp~~f----------------------~vkP~~v~~~G~iv~a 455 (566)
T 4ep8_C 419 EVGSIEVGKLADLVVWSPAFF----------------------GVKPATVIKGGMIAIA 455 (566)
T ss_dssp TSSSSCTTSBCCEEEECGGGT----------------------TTSCSEEEETTEEEEE
T ss_pred CCcCCCCCCCCCEEEECcccc----------------------CCCeeEEeeCCEEEEc
Confidence 999999999999999997643 1378899999999995
No 64
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.97 E-value=1.4e-29 Score=256.88 Aligned_cols=354 Identities=16% Similarity=0.190 Sum_probs=187.7
Q ss_pred cccEEEEccEEEcCCC---ceeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCC---Cchh
Q 009410 52 SSKILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS---ETID 125 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~---~~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~---~~~~ 125 (535)
+.+++|+|++|+|++. .++++|+|+||||++|++....++++++||++|++|+|||||+|+|+....... ....
T Consensus 3 M~~lli~ng~i~d~~~~~~~~~~dV~I~~G~I~~Ig~~~~~~~~~~vID~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~ 82 (426)
T 3mkv_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRVATLP 82 (426)
T ss_dssp CCEEEEEEEEECCTTSSSCEEEEEEEEETTEEEEEESSCCCCSSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHTTSC
T ss_pred cCcEEEECeEEEeCCCCcEecCcEEEEECCEEEEecCCCCCCCCCEEEECCCCEEEeChhhhhhCcccccCCcccccccc
Confidence 4579999999999875 367899999999999999877677899999999999999999999987651110 0001
Q ss_pred hh------HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhccccccc---cee----------------------
Q 009410 126 DF------FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDY---GFH---------------------- 174 (535)
Q Consensus 126 ~~------~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---------------------- 174 (535)
.. ..........++|+....... . .........+....... ...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (426)
T 3mkv_A 83 NVLVTLRAVPIMRAMLRRGFTTVRDAGGA----G-YPFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSP 157 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECSSC----C-HHHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBCCCSSS
T ss_pred hhHHHHHHHhhhhhhhccccccccccccc----c-hhhhhHhhccceeeceeccccccccccccccchhhhhhccccccc
Confidence 11 111223456777777644221 1 11111111111100000 000
Q ss_pred ----------eeeecCChhhHHHHHHHHHHcCCCEEEEEeec--------CCCCcCCHHHHHHHHHHHHhcCCeEEEEcC
Q 009410 175 ----------MAITKWDEVVSDEMEVMVKEKGINSFKFFMAY--------KGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (535)
Q Consensus 175 ----------~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~--------~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 236 (535)
........+......... ..+.......... ......+.......+..+...+.....+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (426)
T 3mkv_A 158 CGCCVRVGALGRVADGVDEVRRAVREEL-QMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAY 236 (426)
T ss_dssp CSSBCCTTCSEEECCSHHHHHHHHHHHH-HHTCSSEEEECBCCSSCSSCCTTSBCSCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred cchhhhhccccccccCHHHHHHHHHHHh-hcccccccccccccccccccccccchhhHHHHHHHHHHHHhcccceeehhh
Confidence 000000112222333333 3444444333221 122344567777777888888888777776
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEecccc
Q 009410 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (535)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~ 316 (535)
......... ..+.. ... +...... .........+......+..
T Consensus 237 ~~~~~~~~~----~~~~~-------------------------------~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 279 (426)
T 3mkv_A 237 TPAAIARAV----RCGVR-------------------------------TIE-HGNLIDD-ETARLVAEHGAYVVPTLVT 279 (426)
T ss_dssp SHHHHHHHH----HTTCC-------------------------------EEE-ECTTCCH-HHHHHHHHHTCEEECCHHH
T ss_pred hhhhHHHHH----hhccc-------------------------------ccc-ccccccc-hhhhhhhhcCccccccccc
Confidence 543322221 11211 111 1111000 1112222222222111110
Q ss_pred ceEeeCcccccCcCccccceeEEcCC--CCCcccHHHHHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHH
Q 009410 317 SGLVLDDSWLWHSDFVTAAKYVMSPP--IRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERM 394 (535)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~p~--~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l 394 (535)
.......... .+......+. ............+...|+.+.+++|..+...... ...
T Consensus 280 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~d~~~~~~~~~---------------~~~ 338 (426)
T 3mkv_A 280 YDALASEGEK------YGLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQRLQ---------------SDE 338 (426)
T ss_dssp HHHHHHHTTT------TTCCHHHHTTHHHHHTTHHHHHHHHHHHTCCBCCCCCCCGGGGGGT---------------THH
T ss_pred hhhhhhhhhh------ccccccccccccccccccchhhHHhhhcCceeeeccCCcccccchH---------------HHH
Confidence 0000000000 0000000000 0000112346678888999999999654332211 011
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeE
Q 009410 395 HLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGK 474 (535)
Q Consensus 395 ~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~ 474 (535)
.. ++ ..++|++|||+++|.|||++||+++++|+|++||+|||||+|.||..+++. +... ..+
T Consensus 339 ~~----~~-~~gls~~eal~~~T~~pA~~lgl~~~~Gsi~~G~~ADlvvlD~dPl~di~~-----------~~~~--~~~ 400 (426)
T 3mkv_A 339 FR----IL-AEVLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGNPLKSVDC-----------LLGQ--GEH 400 (426)
T ss_dssp HH----HH-HTTSCHHHHHHHTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSCTTTCSTT-----------TCSS--STT
T ss_pred HH----HH-HhCCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCcceEEEECCChHHhHHH-----------HhCC--CCC
Confidence 11 12 346999999999999999999998889999999999999999987644421 1111 236
Q ss_pred EEEEEECCEEEEE
Q 009410 475 VEVTIAGGRVVWE 487 (535)
Q Consensus 475 v~~v~~~Gr~V~~ 487 (535)
|++||++||+|++
T Consensus 401 v~~Vi~~G~vv~~ 413 (426)
T 3mkv_A 401 IPLVMKDGRLFVN 413 (426)
T ss_dssp CCEEEETTEEEEE
T ss_pred ccEEEECCEEEEC
Confidence 8999999997654
No 65
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.93 E-value=2e-25 Score=225.04 Aligned_cols=323 Identities=17% Similarity=0.144 Sum_probs=167.1
Q ss_pred eeeeEEEeCCEEEEeeCCCCCCCCceEEecCCCEEeecccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccC
Q 009410 69 QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIP 148 (535)
Q Consensus 69 ~~~~I~I~~G~I~~Vg~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~ 148 (535)
++++|+|+||+|++|++ + + || +|++|+|||||+|+|+... +......+....++++++||||++|+...
T Consensus 28 ~~~~V~I~~g~I~~vg~------~-~-iD-~g~~v~PGlID~H~H~~~~--~~~~~~~l~~~~~~~l~~GvTtv~d~~~~ 96 (376)
T 1o12_A 28 FTGDVEIEEGKIVKVEK------R-E-CI-PRGVLMPGFVDPHIHGVVG--ADTMNCDFSEMEEFLYSQGVTTFLATTVS 96 (376)
T ss_dssp EEEEEEEETTEEEEEEE------C-C-SC-CSSEEEECEEEEEECEETT--EETTTTCHHHHHHHHHTTTEEEEEEECCS
T ss_pred cCceEEEECCEEEEeCC------C-c-cC-CCCEEccCeEEEeecCCCC--CCCChhhHHHHHHHHHhCCcEEEEeccCC
Confidence 68999999999999986 1 4 99 9999999999999999765 21111236677888999999999998644
Q ss_pred CCC-ChHHHHHHHHHHhcc--cccccceeeeeec--------CChhhHHHH-HHHHHHcCCCEEEEE-eecCCCCcCCHH
Q 009410 149 ING-SLTAGFEAYEKKAKN--SCMDYGFHMAITK--------WDEVVSDEM-EVMVKEKGINSFKFF-MAYKGSFMINDE 215 (535)
Q Consensus 149 ~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~g~~~ik~~-~~~~~~~~~~~~ 215 (535)
.+. ...+.++...+.... .....+.+...+. ...+..... .+..+.. .+.++.. ..+.. ...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~g~~i~g~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pe~----~~~ 171 (376)
T 1o12_A 97 TSLEKMKEILRKARDYILENPSTSLLGVHLEGPYISKEKKGAHSEKHIRPPSERELSEI-DSPAKMLTFAPEI----ESS 171 (376)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTCSEEEEEEECSSSCGGGCTTSCTTTCCCCCHHHHTTC-CTTEEEEEECTTS----TTG
T ss_pred CCHHHHHHHHHHHHHHhhccCCCceEEEEEEcCcCCcccCCCCCHHHhcCCCHHHHHHh-hCCeEEEEEccCC----ccH
Confidence 221 122223322222211 1001111111100 011111111 1222121 2223332 22111 111
Q ss_pred HHHHHHHHHHhcCCeEEE-EcCChhhHHHHHHHHHHcCCCCccccc-ccCChhh-HHHHHHHHHHHHHhcCCCE---EEE
Q 009410 216 LLIEGFKRCKSLGALAMV-HAENGDAVFEGQKRMIELGITGPEGHA-LSRPPLL-EGEATTRAIRLAEFVNTPL---YVV 289 (535)
Q Consensus 216 ~l~~~~~~a~~~g~~v~~-H~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~ 289 (535)
++++.|++.|+++++ |+.... +..+.+.+.|...+.+.. ...+... +..-+..++. ...+ .+.
T Consensus 172 ---~~i~~A~~~g~~v~igH~~~~~---~~i~~a~~~G~~~itH~~~~~~~~~~~~~g~~~~~l~-----~~~~~~~~~~ 240 (376)
T 1o12_A 172 ---ELLLRLVKRDIVLSAGHSIATF---EEFMKFYKEGVKRITHFPNGLKPLHHREIGITGAGLL-----LDDVKLELIC 240 (376)
T ss_dssp ---GGGGGGGGGTCEEEECSBCCCH---HHHHHHHTTTCCEESSTTTTBCCCCSSCCHHHHHHHH-----CTTCEEEEEC
T ss_pred ---HHHHHHHHCCCEEEeecCccCH---HHHHHHHHCCCCeEEecccCcCChhhcccchhhhhhc-----CCcceEEEeC
Confidence 578899999999998 985431 223334455554332111 0111100 0000111111 1122 234
Q ss_pred EccCHHHHHHHHHHHHc-CCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEE--e-
Q 009410 290 HVMSMDAMEEIAKARKA-GQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLV--G- 365 (535)
Q Consensus 290 H~~~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~l--g- 365 (535)
|+..... +.++.+.+. +.. ..++.++.... .....+ .+ ...|+++.+ |
T Consensus 241 ~~~~~~p-~~~~~~~~~~g~~-~~~~~sd~~~~-------~g~~~g-~~------------------~~~g~~~~~~~g~ 292 (376)
T 1o12_A 241 DGVHLSR-EMVKLVYKVKKAN-GIVLVTDSISA-------AGLKDG-TT------------------TLGDLVVKVKDGV 292 (376)
T ss_dssp SSSSSCH-HHHHHHHHHHTGG-GEEEECCBCTT-------TTSCSC-EE------------------ESSSSEEEEETTE
T ss_pred CCcCcCH-HHHHHHHhhCCCC-CEEEecCchhh-------cCCCCe-eE------------------EECCeEEEEeCCe
Confidence 5543332 445555444 432 11122111000 000000 01 011223332 1
Q ss_pred ---CCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccEE
Q 009410 366 ---TDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADII 442 (535)
Q Consensus 366 ---tD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADlv 442 (535)
+|+...... ..+...++.+++..+++++++++++|.|||++||++++ |+|++||.||||
T Consensus 293 ~~~~~g~~~g~~-----------------~~l~~~l~~~~~~~~~~~~~~l~~~T~~~A~~lgl~~~-G~i~~G~~ADlv 354 (376)
T 1o12_A 293 PRLEDGTLAGST-----------------LFFSQAVKNFRKFTGCSITELAKVSSYNSCVELGLDDR-GRIAEGTRADLV 354 (376)
T ss_dssp EECTTSCBCCBC-----------------CCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCTTS-SCCSTTSBCCEE
T ss_pred EEeCCCcccccc-----------------cCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCC-ccCCCCCcCCEE
Confidence 221111110 12333343444456799999999999999999999655 999999999999
Q ss_pred EEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECC
Q 009410 443 IFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEND 489 (535)
Q Consensus 443 vld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~ 489 (535)
|+|.+ .+|..||++|++||+++
T Consensus 355 ~~d~~-------------------------~~v~~v~~~G~~v~~~~ 376 (376)
T 1o12_A 355 LLDED-------------------------LNVVMTIKEGEVVFRSR 376 (376)
T ss_dssp EECTT-------------------------CCEEEEEETTEEEEEC-
T ss_pred EECCC-------------------------CCEEEEEECCEEEeecC
Confidence 99965 37999999999999875
No 66
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.55 E-value=8.4e-15 Score=112.09 Aligned_cols=66 Identities=20% Similarity=0.387 Sum_probs=56.7
Q ss_pred cccEEEEccEEEcCCC--ceeeeEEEeCCEEEEeeCCCCC---CCCceEEecCCCEEeecccccccccccc
Q 009410 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAME 117 (535)
Q Consensus 52 ~~~~vi~n~~vi~~~~--~~~~~I~I~~G~I~~Vg~~~~~---~~~~~vID~~G~~vlPGlID~H~H~~~~ 117 (535)
..+++|+|++|++++. ...++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..+
T Consensus 3 ~~~~li~n~~i~~~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~p 73 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHVIRG 73 (81)
T ss_dssp CCSEEEESSEEECSCTTCSEESEEEEETTEEEEEESGGGGGGCCTTCEEEECTTCEEEECCCCTTEEEECC
T ss_pred cCCEEEECCEEEeCCCCCccccEEEEECCEEEEEeCchHhcccCCCCEEEECCCCEEeeCeEeeeeCCCCc
Confidence 3679999999999775 3678999999999999985432 3457899999999999999999999887
No 67
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=99.17 E-value=9.8e-10 Score=106.12 Aligned_cols=257 Identities=15% Similarity=0.113 Sum_probs=131.1
Q ss_pred cccccccccccccCC--------CCchhhhHHHHHHHHhCCcEEEeccccCCC-CChHHHHHHHHHHhcccccccce---
Q 009410 106 GGIDPHTHLAMEFMG--------SETIDDFFSGQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYGF--- 173 (535)
Q Consensus 106 GlID~H~H~~~~~~g--------~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--- 173 (535)
|+||+|+|+...... ....+........+.+.|||+++++..... .......+...+.+.+.+...++
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~~~~ 85 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQD 85 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCCG
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEeeccccC
Confidence 999999999753100 011223344556677899999998864312 12333333222222122222222
Q ss_pred --eeee-ecCChh-hHHHHHHHHHHcCC-------CEEE-EEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhH
Q 009410 174 --HMAI-TKWDEV-VSDEMEVMVKEKGI-------NSFK-FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (535)
Q Consensus 174 --~~~~-~~~~~~-~~~~~~~~~~~~g~-------~~ik-~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~ 241 (535)
+... .....+ ..+.+.+.. ..|+ ..++ +..++.+......+.+++.++.|++.|+++.+|++.....
T Consensus 86 ~~hP~~~~~~~~~~l~~~~~~~l-~~gi~~~~~~~~~iGe~gld~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~~~ 164 (291)
T 1bf6_A 86 AFFPEHVATRSVQELAQEMVDEI-EQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMG 164 (291)
T ss_dssp GGCCTHHHHSCHHHHHHHHHHHH-HTCSTTSSCCEEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCSH
T ss_pred ccCcHhhhcCCHHHHHHHHHHHH-HhccCCcCcceeeEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCCCh
Confidence 1100 001111 122333333 2232 2332 2233222111123568889999999999999999532111
Q ss_pred HHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcC---CCEEEEEccCHHHHHHHHHHHHcCCcEEeccccce
Q 009410 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN---TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSG 318 (535)
Q Consensus 242 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 318 (535)
.+.+ ++..+.+ .++++.|+......+.+..+.+.|+.+..+....
T Consensus 165 ~~~~-------------------------------~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~- 212 (291)
T 1bf6_A 165 LEQL-------------------------------ALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGK- 212 (291)
T ss_dssp HHHH-------------------------------HHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEEECCTTC-
T ss_pred HHHH-------------------------------HHHHHcCCCchhEEEECCCCCCCHHHHHHHHHCCCEEEEccCcc-
Confidence 1222 2222222 3567899954222367777888898887653210
Q ss_pred EeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcC--CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHH
Q 009410 319 LVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHL 396 (535)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~ 396 (535)
. . .++ .......++++++.| -+++++||... ...... ... ++....+..
T Consensus 213 --------------~-~----~~~--~~~~~~~~~~~~~~~~~dril~~TD~p~-~~~~~~-----~~~--~~~~~~~~~ 263 (291)
T 1bf6_A 213 --------------N-S----YYP--DEKRIAMLHALRDRGLLNRVMLSMDITR-RSHLKA-----NGG--YGYDYLLTT 263 (291)
T ss_dssp --------------T-T----TSC--HHHHHHHHHHHHHTTCGGGEEECCCCCS-GGGSGG-----GTS--CCTTHHHHT
T ss_pred --------------c-C----CCC--HHHHHHHHHHHHHhCCCCeEEEcCCCCC-Cccchh-----cCC--CCHHHHHHH
Confidence 0 0 001 011235578888887 66899999642 111100 000 011112233
Q ss_pred HHHHHHhcCCCCHHHHHHHHhHHHHHHcC
Q 009410 397 VWDTMVESGQISVTDYVRLTSTECARIFN 425 (535)
Q Consensus 397 ~~~~~~~~~~ls~~eal~~~T~~~A~~lg 425 (535)
.+..+ ...|+|.+++.+..|.||+++||
T Consensus 264 ~~~~l-~~~g~~~~~~~~~~~~N~~rl~~ 291 (291)
T 1bf6_A 264 FIPQL-RQSGFSQADVDVMLRENPSQFFQ 291 (291)
T ss_dssp HHHHH-HHTTCCHHHHHHHHTHHHHHHCC
T ss_pred HHHHH-HHcCCCHHHHHHHHHHhHHHHhC
Confidence 33333 34569999999999999999985
No 68
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=99.12 E-value=3.6e-09 Score=103.73 Aligned_cols=275 Identities=13% Similarity=0.038 Sum_probs=134.5
Q ss_pred cccccccccccccCCC--Cch------hhhHH----HHHHHHhCCcEEEeccccCCC-CChHHHHHHHHHHhc-cccccc
Q 009410 106 GGIDPHTHLAMEFMGS--ETI------DDFFS----GQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAK-NSCMDY 171 (535)
Q Consensus 106 GlID~H~H~~~~~~g~--~~~------~~~~~----~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ 171 (535)
||||+|+|+....... ..+ ++... .+..+.+.|||++++...... .......+ ..+..+ ..+...
T Consensus 16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~-la~~~~~~i~~~~ 94 (330)
T 2ob3_A 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAE-VSRAADVHIVAAT 94 (330)
T ss_dssp CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHH-HHHHHTCEEECEE
T ss_pred CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCCCCcCCCHHHHHH-HHHHhCCcEEEEe
Confidence 9999999997631111 011 22222 256678999999998864321 22333333 333222 334445
Q ss_pred ceee--e-ee-cCChhhH-HHHHHHHHH--c----CCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcC--Ch
Q 009410 172 GFHM--A-IT-KWDEVVS-DEMEVMVKE--K----GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NG 238 (535)
Q Consensus 172 ~~~~--~-~~-~~~~~~~-~~~~~~~~~--~----g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~--~~ 238 (535)
|+|. + .. ..+.+.. +.+.+.... . .+..+++.++ ........+.+++.++.|++.|+++.+|+. +.
T Consensus 95 G~hp~~p~~~~~~~~~~l~~~l~~~~~~gi~~~~~k~~aiEiGld-~~~~~~q~~~f~~q~~lA~~~glPv~iH~~~~~r 173 (330)
T 2ob3_A 95 GLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATT-GKATPFQELVLKAAARASLATGVPVTTHTAASQR 173 (330)
T ss_dssp ECCSCCCHHHHTCCHHHHHHHHHHHHHTCSTTSCCCCSEEEEECS-SSCCHHHHHHHHHHHHHHHHHCCCEEEECCGGGT
T ss_pred cCCcCCCchhccCCHHHHHHHHHHHHHhhccccccceeEEEEeCC-CCCCHHHHHHHHHHHHHHHHhCCeEEEECCCCCC
Confidence 5553 1 10 0111112 223222211 1 3455566555 211111234488899999999999999995 22
Q ss_pred hhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc-CHHHHHHHHHHHHcCCcEEeccccc
Q 009410 239 DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIGEPVVS 317 (535)
Q Consensus 239 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~-~~~~~~~~~~~~~~g~~v~~~~~~~ 317 (535)
... +.++.+.+.|.. ..++.+.||. +.+. +....+.+.|+.+..+....
T Consensus 174 ~a~-e~l~iL~~~g~~----------------------------~~~~~i~H~f~~~~~-e~a~~~~~~G~~i~~~~~G~ 223 (330)
T 2ob3_A 174 DGE-QQAAIFESEGLS----------------------------PSRVCIGHSDDTDDL-SYLTALAARGYLIGLDHIPY 223 (330)
T ss_dssp HHH-HHHHHHHHTTCC----------------------------GGGEEECSGGGCCCH-HHHHHHHHTTCEEEECCTTC
T ss_pred CHH-HHHHHHHHcCcC----------------------------cccEEEeCCCCCCCH-HHHHHHHhCCCEEEeCCCcc
Confidence 222 333322222211 1134678997 4544 77888888998776542100
Q ss_pred eEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcC--CeEEEeCCCCC-CChh----hhhcCCCCcccCcchH
Q 009410 318 GLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCA-FNST----QKAFGIDDFRKIPNGI 390 (535)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~G--v~~~lgtD~~~-~~~~----~~~~~~~~~~~~~~g~ 390 (535)
..+...... .... .. ..++ .......++++++.| -+++++||... .... .... -.+.|++.
T Consensus 224 -~tf~~~~~~--~~~~-~~--~~~~--~~~~~~~l~~~~~~~p~drilleTD~p~~l~~~~~~~g~~~----~~n~pn~~ 291 (330)
T 2ob3_A 224 -SAIGLEDNA--SASA-LL--GIRS--WQTRALLIKALIDQGYMKQILVSNDWTFGFSSYVTNIMDVM----DRVNPDGM 291 (330)
T ss_dssp -CCTTCTTCH--HHHH-HH--CSSC--HHHHHHHHHHHHHTTCGGGEEECCCCCSEECSSSTTHHHHH----HHHCTTGG
T ss_pred -ccccccccc--cccc-cc--cCCC--HHHHHHHHHHHHHhCCCCeEEEeCCCCCCcccccccCCCcc----cccCCCCc
Confidence 000000000 0000 00 0000 001124478888888 77899999532 1110 0000 00111111
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcC
Q 009410 391 EERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 425 (535)
Q Consensus 391 ~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg 425 (535)
...+...+..+.+ .|+|++++.++.|.||+++|+
T Consensus 292 ~~~~~~~ia~l~~-~G~~~eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 292 AFIPLRVIPFLRE-KGVPQETLAGITVTNPARFLS 325 (330)
T ss_dssp GHHHHTHHHHHHH-TTCCHHHHHHHHTHHHHHHHS
T ss_pred chHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhc
Confidence 1112222223333 579999999999999999997
No 69
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.99 E-value=4.8e-08 Score=92.44 Aligned_cols=243 Identities=16% Similarity=0.113 Sum_probs=129.3
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeee-cCChhhH
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (535)
+||+|+|+... . ...+.......+.++||++++.++... ...... ....+..+..+..+|++.... ....+..
T Consensus 5 ~iD~H~Hl~~~--~--~~~~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~~-~~l~~~~~~~~~~~G~hP~~~~~~~~~~~ 78 (259)
T 1zzm_A 5 FIDTHCHFDFP--P--FSGDEEASLQRAAQAGVGKIIVPATEA-ENFARV-LALAENYQPLYAALGLHPGMLEKHSDVSL 78 (259)
T ss_dssp EEESCBCTTST--T--TTTCHHHHHHHHHHTTEEEEEEECCSG-GGHHHH-HHHHHHCTTEEEEECCCGGGGGGCCHHHH
T ss_pred EEEeeecCCch--h--hccCHHHHHHHHHHcCCCEEEEecCCH-HHHHHH-HHHHHhCCCeEEEEEecccccccCCHHHH
Confidence 89999999764 1 122334446778899999998774332 122222 223333333223333333211 1123445
Q ss_pred HHHHHHHHH--cCCCEEE-EEeecCCCC---cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 186 DEMEVMVKE--KGINSFK-FFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 186 ~~~~~~~~~--~g~~~ik-~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+++.++... .+..+++ +.+++.... ....+.++..++.|.++|+++.+|+.... .+..+
T Consensus 79 ~~l~~~~~~~~~~~~~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~a~--~~~~~------------- 143 (259)
T 1zzm_A 79 EQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTH--DKLAM------------- 143 (259)
T ss_dssp HHHHHHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCH--HHHHH-------------
T ss_pred HHHHHHHhcCCCCEEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecccH--HHHHH-------------
Confidence 667666643 2333332 223432111 12245788999999999999999985431 11221
Q ss_pred cccCChhhHHHHHHHHHHHHHhcC--CCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcccccee
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVN--TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (535)
+.++.+ .++ +.|+..... +.+..+.+.|+.+....... +..
T Consensus 144 ------------------il~~~~~~~~~-i~H~~~g~~-~~~~~~~~~g~~i~~~g~~~-------------~~~---- 186 (259)
T 1zzm_A 144 ------------------HLKRHDLPRTG-VVHGFSGSL-QQAERFVQLGYKIGVGGTIT-------------YPR---- 186 (259)
T ss_dssp ------------------HHHHHCCTTCE-EETTCCSCH-HHHHHHHHTTCEEEECGGGG-------------CTT----
T ss_pred ------------------HHHhcCCCCCE-EEEcCCCCH-HHHHHHHHCCCEEEECceee-------------ccc----
Confidence 122222 234 449866553 66677777887766442210 000
Q ss_pred EEcCCCCCcccHHHHHHHHhc--CCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHH
Q 009410 338 VMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRL 415 (535)
Q Consensus 338 ~~~p~~r~~~~~~~~~~~l~~--Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~ 415 (535)
. ..++++++. .-+++++||++ +.... ++..-++.. ..+...+..+.+..|+|.+++.+.
T Consensus 187 --------~---~~~~~~~~~~~~dril~eTD~P-~~~p~------~~~g~~~~p-~~l~~~~~~la~~~g~~~e~~~~~ 247 (259)
T 1zzm_A 187 --------A---SKTRDVIAKLPLASLLLETDAP-DMPLN------GFQGQPNRP-EQAARVFAVLCELRREPADEIAQA 247 (259)
T ss_dssp --------T---CSHHHHHHHSCGGGEEECCCBT-SSCCT------TCTTSCCCG-GGHHHHHHHHHHHCSSCHHHHHHH
T ss_pred --------c---HHHHHHHHhCCHHHEEEecCCC-CccCC------CCCCCCCcH-HHHHHHHHHHHHHHCcCHHHHHHH
Confidence 0 113444443 25689999953 32111 121111100 123333334444557999999999
Q ss_pred HhHHHHHHcCC
Q 009410 416 TSTECARIFNV 426 (535)
Q Consensus 416 ~T~~~A~~lgl 426 (535)
.|.|++++|++
T Consensus 248 ~~~Na~rl~~l 258 (259)
T 1zzm_A 248 LLNNTYTLFNV 258 (259)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhCc
Confidence 99999999987
No 70
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.96 E-value=1.8e-08 Score=98.40 Aligned_cols=264 Identities=14% Similarity=0.095 Sum_probs=130.8
Q ss_pred cccccccccccccCCC--Cc-h-----hhhHHH---HHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccce
Q 009410 106 GGIDPHTHLAMEFMGS--ET-I-----DDFFSG---QAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGF 173 (535)
Q Consensus 106 GlID~H~H~~~~~~g~--~~-~-----~~~~~~---~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 173 (535)
||||+|+|+....... .. . ++.... ...+.++|||+++++...... ......+...+.+.+.+...|+
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~ 96 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGI 96 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEB
T ss_pred CCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEeec
Confidence 9999999997631010 00 1 122222 355778999999988644222 2333333323222233344444
Q ss_pred eeeee--cCC-hhhHHHHHHHHH---HcCCC-------EEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC--h
Q 009410 174 HMAIT--KWD-EVVSDEMEVMVK---EKGIN-------SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN--G 238 (535)
Q Consensus 174 ~~~~~--~~~-~~~~~~~~~~~~---~~g~~-------~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~--~ 238 (535)
+.... ... ....+++.++.. ..|.. .+++.+++.+......+.+++.++.|++.|+++.+|+.. .
T Consensus 97 hp~~~~~~~~~~~~~~~l~~~~~~~~~~gige~G~~~g~i~~~ld~~~~~~~q~~~~~~~~~lA~~~~~pv~iH~~~~~~ 176 (314)
T 2vc7_A 97 YIYIDLPFYFLNRSIDEIADLFIHDIKEGIQGTLNKAGFVKIAADEPGITKDVEKVIRAAAIANKETKVPIITHSNAHNN 176 (314)
T ss_dssp CCSSCCCGGGTTCCHHHHHHHHHHHHHTCSSSSSCCCCSEEEECCTTCSCHHHHHHHHHHHHHHHHHCCCEEEECCTTTT
T ss_pred CCCCCCchhhhccCHHHHHHHHHHHHHhhcccCCCCCCeEEEeecCCCCCHHHHHHHHHHHHHHHHHCCEEEEeCCCccc
Confidence 44221 110 112334433332 22322 245545554322222456788999999999999999952 2
Q ss_pred hhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccce
Q 009410 239 DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSG 318 (535)
Q Consensus 239 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 318 (535)
.. .+.++.+.+.|.. ..++.+.|+......+.+..+.+.|+.+..+....
T Consensus 177 ~~-~~~~~~l~~~~~~----------------------------~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~- 226 (314)
T 2vc7_A 177 TG-LEQQRILTEEGVD----------------------------PGKILIGHLGDTDNIDYIKKIADKGSFIGLDRYGL- 226 (314)
T ss_dssp HH-HHHHHHHHHTTCC----------------------------GGGEEETTGGGCCCHHHHHHHHHTTCEEEECCTTC-
T ss_pred Ch-HHHHHHHHHcCCC----------------------------cccEEEECCCCCCCHHHHHHHHHcCCEEEEeCCCc-
Confidence 21 2222222222211 12456789865222367777888898776552110
Q ss_pred EeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhc--CCeEEEeCCCCCCC-hhhhhcCCCCcc---cCcc-hHH
Q 009410 319 LVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFN-STQKAFGIDDFR---KIPN-GIE 391 (535)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~--Gv~~~lgtD~~~~~-~~~~~~~~~~~~---~~~~-g~~ 391 (535)
. .+ .........+.++++. +-++.++||....+ .... +++. ..++ +..
T Consensus 227 -----~-----~~-----------~~~~~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~----~p~~~~~g~~~~~~~ 281 (314)
T 2vc7_A 227 -----D-----LF-----------LPVDKRNETTLRLIKDGYSDKIMISHDYCCTIDWGTA----KPEYKPKLAPRWSIT 281 (314)
T ss_dssp -----T-----TT-----------SCHHHHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGG----CTTSHHHHCTTCSTT
T ss_pred -----c-----cC-----------CCHHHHHHHHHHHHHcCCCCeEEEcCCcccccccccc----chhhhhcCCCCcCHH
Confidence 0 00 0001112345566665 46689999963211 0000 0110 0000 000
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcC
Q 009410 392 ERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 425 (535)
Q Consensus 392 ~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg 425 (535)
..+......+ ...|++.+++.+..|.||+++|+
T Consensus 282 ~~~~~~~~~l-~~~g~~~e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 282 LIFEDTIPFL-KRNGVNEEVIATIFKENPKKFFS 314 (314)
T ss_dssp HHHHTHHHHH-HHTTCCHHHHHHHHTHHHHHHTC
T ss_pred HHHHHHHHHH-HHcCCCHHHHHHHHHHCHHHHhC
Confidence 1122222223 34579999999999999999985
No 71
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.89 E-value=4.2e-07 Score=86.61 Aligned_cols=241 Identities=15% Similarity=0.112 Sum_probs=130.2
Q ss_pred cccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhc-ccccccceeeee-ec----
Q 009410 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-NSCMDYGFHMAI-TK---- 179 (535)
Q Consensus 106 GlID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~---- 179 (535)
++||+|+|+... . ...+.......+.++||++++++.... .......+ ..+..+ +.+..+|++... ..
T Consensus 5 ~~iD~H~Hl~~~--~--~~~~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~~~~-l~~~~~~~i~~~~GihP~~~~~~~~~ 78 (272)
T 2y1h_A 5 GLVDCHCHLSAP--D--FDRDLDDVLEKAKKANVVALVAVAEHS-GEFEKIMQ-LSERYNGFVLPCLGVHPVQGLPPEDQ 78 (272)
T ss_dssp CEEEEEECTTSG--G--GTTTHHHHHHHHHHTTEEEEEECCSSG-GGHHHHHH-HHHHTTTTEEEEECCCSBC-------
T ss_pred cEEEEeeCCCch--h--hhcCHHHHHHHHHHCCCCEEEEeCCCH-HHHHHHHH-HHHHCCCCEEEEEEECCCcccccccc
Confidence 599999999754 1 122344446778899999999874332 12222232 333333 233344554422 11
Q ss_pred --CChhhHHHHHHHHHH--cCCCEEEE-EeecCCCC-------cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHH
Q 009410 180 --WDEVVSDEMEVMVKE--KGINSFKF-FMAYKGSF-------MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (535)
Q Consensus 180 --~~~~~~~~~~~~~~~--~g~~~ik~-~~~~~~~~-------~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~ 247 (535)
...+..+++.+++.+ ..+.+++. .+++.... ....+.+++.++.|.++++++.+|+.... .+.+
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~a~--~~~~-- 154 (272)
T 2y1h_A 79 RSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAG--RPTI-- 154 (272)
T ss_dssp CBCCHHHHHHHHHHHHHHGGGCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTTCH--HHHH--
T ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcH--HHHH--
Confidence 122345556555532 34445542 23331111 11245788999999999999999986431 1111
Q ss_pred HHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcC-CCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccc
Q 009410 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWL 326 (535)
Q Consensus 248 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~ 326 (535)
++.+..+ .++++ |+...+. +.++.+.+.|+.+......
T Consensus 155 -----------------------------~il~~~~~~~~v~-H~~~g~~-~~~~~~~~~g~~i~~~g~~---------- 193 (272)
T 2y1h_A 155 -----------------------------NLLQEQGAEKVLL-HAFDGRP-SVAMEGVRAGYFFSIPPSI---------- 193 (272)
T ss_dssp -----------------------------HHHHHTTCCSEEE-ETCCSCH-HHHHHHHHTTCEEEECGGG----------
T ss_pred -----------------------------HHHHhCCCCCEEE-EccCCCH-HHHHHHHHCCCEEEECCcc----------
Confidence 2222222 35555 9866543 6677777788776654321
Q ss_pred cCcCccccceeEEcCCCCCcccHHHHHHHHhcC--CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhc
Q 009410 327 WHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVES 404 (535)
Q Consensus 327 ~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~ 404 (535)
.+ + ..++++.+.. -+++++||.+-.... . .-.+.|. .+...+..+...
T Consensus 194 ---------~~----~-------~~~~~~~~~~~~drll~eTD~P~~~p~-~-----g~~~~p~----~l~~~~~~la~~ 243 (272)
T 2y1h_A 194 ---------IR----S-------GQKQKLVKQLPLTSICLETDSPALGPE-K-----QVRNEPW----NISISAEYIAQV 243 (272)
T ss_dssp ---------GT----C-------HHHHHHHHHSCGGGEEECCCTTSSCSS-T-----TSCCCGG----GHHHHHHHHHHH
T ss_pred ---------cC----c-------HHHHHHHHhCCHHHEEEecCCCCCCCC-C-----CCcCcHH----HHHHHHHHHHHH
Confidence 00 0 1245555442 368999995422111 0 0011111 122222223233
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCC
Q 009410 405 GQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 405 ~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
.|++.+++.+..|.|++++|+++
T Consensus 244 ~g~~~e~~~~~~~~N~~~l~~~~ 266 (272)
T 2y1h_A 244 KGISVEEVIEVTTQNALKLFPKL 266 (272)
T ss_dssp HTSCHHHHHHHHHHHHHHHSTTH
T ss_pred HCcCHHHHHHHHHHHHHHHHHhH
Confidence 47999999999999999999984
No 72
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.81 E-value=2.6e-07 Score=88.09 Aligned_cols=251 Identities=13% Similarity=0.063 Sum_probs=134.8
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcc----cccccceeeeeec-CC
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN----SCMDYGFHMAITK-WD 181 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~ 181 (535)
|||+|+|+... ...++.......+...||..++..+.... .... .....+..+. .+..+|+++.... ..
T Consensus 3 ~iD~H~HL~~~----~~~~d~~~vl~~a~~~gV~~~v~~g~~~~-~~~~-~~~la~~~~~~~~~v~~~~GiHP~~~~~~~ 76 (287)
T 3rcm_A 3 LIDIGVNLTNS----SFHDQQAAIVERALEAGVTQMLLTGTSLA-VSEQ-ALELCQQLDASGAHLFATAGVHPHDAKAWD 76 (287)
T ss_dssp EEEEEECTTCG----GGTTCHHHHHHHHHHTTEEEEEECCCSHH-HHHH-HHHHHHHHCTTSSSEEEEECCCGGGGGGCC
T ss_pred eEEEeecCCch----hcccCHHHHHHHHHHcCCeEEEEecCCHH-HHHH-HHHHHHhCCCCCceEEEEEEECcCccccCC
Confidence 89999999754 11234555577888999999885532211 1222 2222223332 3444555543221 23
Q ss_pred hhhHHHHHHHHHHcCCCEEE-EEeecCCCC---cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009410 182 EVVSDEMEVMVKEKGINSFK-FFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (535)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik-~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (535)
++..+.+.++++...+.++. +.+++.... ....+.+++.++.|.++++++.+|+.... .+.++.+.+.+
T Consensus 77 ~~~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r~a~--~~~l~il~~~~----- 149 (287)
T 3rcm_A 77 TDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERDAS--ERLLAILKDYR----- 149 (287)
T ss_dssp TTHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCH--HHHHHHHHTTG-----
T ss_pred HHHHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcCCcH--HHHHHHHHHcC-----
Confidence 34566777766444444554 234543211 12356789999999999999999996431 12222111110
Q ss_pred cccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCcccccee
Q 009410 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (535)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (535)
....+. +.|+.+.+. +.++.+.+.|+.+...... . +
T Consensus 150 -----------------------~~~~~~-V~H~fsG~~-e~a~~~l~~G~yis~~g~i---------~----~------ 185 (287)
T 3rcm_A 150 -----------------------DHLTGA-VVHCFTGER-EALFAYLDLDLHIGITGWI---------C----D------ 185 (287)
T ss_dssp -----------------------GGCSCE-EECSCCCCH-HHHHHHHHTTCEEEECGGG---------G----C------
T ss_pred -----------------------CCCCeE-EEEeCCCCH-HHHHHHHHCCcEEEECchh---------c----c------
Confidence 001233 559876554 6677777788776654221 0 0
Q ss_pred EEcCCCCCcccHHHHHHHHhc--CCeEEEeCCCCCCChhhhhcC-CCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHH
Q 009410 338 VMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFG-IDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVR 414 (535)
Q Consensus 338 ~~~p~~r~~~~~~~~~~~l~~--Gv~~~lgtD~~~~~~~~~~~~-~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~ 414 (535)
..+. ..++++++. --++++.||. |+........ ...-.+-|. .+...++.+.+..|++.+++.+
T Consensus 186 ----~k~~----~~l~~~v~~ip~drlLlETD~-P~l~p~~~~~~~rg~~n~P~----~l~~v~~~lA~~~g~s~eev~~ 252 (287)
T 3rcm_A 186 ----ERRG----THLHPLVGNIPEGRLMLESDA-PYLLPRSLRPKPKSGRNEPA----FLPEVLREVALHRGESAEHTAA 252 (287)
T ss_dssp ----TTTC----GGGHHHHTTSCTTSEEECCCT-TSCCCTTCSSCCTTCCCCGG----GHHHHHHHHHHHHTSCHHHHHH
T ss_pred ----ccCH----HHHHHHHHhcCCccEEEeccC-CccCccccccccCCCcCCHH----HHHHHHHHHHHHhCcCHHHHHH
Confidence 0000 114444444 2458999995 4332210000 000011122 2333343443444799999999
Q ss_pred HHhHHHHHHcCCC
Q 009410 415 LTSTECARIFNVY 427 (535)
Q Consensus 415 ~~T~~~A~~lgl~ 427 (535)
..|.|+.++||++
T Consensus 253 ~~~~N~~rlf~l~ 265 (287)
T 3rcm_A 253 HTTATARDFFQLP 265 (287)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCC
Confidence 9999999999984
No 73
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.80 E-value=2.2e-07 Score=91.35 Aligned_cols=279 Identities=15% Similarity=0.106 Sum_probs=151.0
Q ss_pred cccccccccccccCC---------CCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHH----hcccccccc
Q 009410 106 GGIDPHTHLAMEFMG---------SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK----AKNSCMDYG 172 (535)
Q Consensus 106 GlID~H~H~~~~~~g---------~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 172 (535)
|+..+|=|+...+.+ ....+.....+..+.+.|++|++|+.....+.....+....+. +-......|
T Consensus 21 G~tl~HEHl~~~~~~~~~~~~~~~l~d~~~~~~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~Gv~Iv~~TG 100 (363)
T 3ovg_A 21 GITDCHDHFIKNGGPEVEEHIDFLMLNVDASIKEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLGGNVIMSTG 100 (363)
T ss_dssp CEEEEEECSCBCSSHHHHHCGGGCBCCHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CCceeccceeccCChhhccCCcccccCHHHHHHHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCCcEEEEeCC
Confidence 777888887654210 1122333344556678999999999755444444455554444 333333334
Q ss_pred eeeeee-----c----C-ChhhHHHHHHHHHHcC-----------------CCEEEEEeecCCCCcCCHHHHHHHHHHHH
Q 009410 173 FHMAIT-----K----W-DEVVSDEMEVMVKEKG-----------------INSFKFFMAYKGSFMINDELLIEGFKRCK 225 (535)
Q Consensus 173 ~~~~~~-----~----~-~~~~~~~~~~~~~~~g-----------------~~~ik~~~~~~~~~~~~~~~l~~~~~~a~ 225 (535)
++.... . . .++..+.+..-+ ..| +..+|+..++........+.+++.++.|.
T Consensus 101 ~y~~~~~~~~~~~~~~~~~e~l~~~~~~ei-~~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~~~t~~Q~~~f~aq~~~A~ 179 (363)
T 3ovg_A 101 FHKAKFYDKYSSWLAVVPTEEIVKMCVAEI-EEGMDEYNYNGPVVKRSKAKAGIIKAGTGYGAIDRLELKALEVAARTSI 179 (363)
T ss_dssp CCCGGGSCTTTSHHHHSCHHHHHHHHHHHH-HTCCBTTTTSSSCCCBCSCCCCEEEEEEEETBEEHHHHHHHHHHHHHHH
T ss_pred CCcCcccccCcHhhhcCCHHHHHHHHHHHH-HhcccccccccccccCCCccCCEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 333211 0 0 122222222222 222 34578777765333334667899999999
Q ss_pred hcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHH-
Q 009410 226 SLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKAR- 304 (535)
Q Consensus 226 ~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~- 304 (535)
+.|+++.+|........+.++.+.+.|.. ..++.+.|+......+....+.
T Consensus 180 e~glPViiH~r~gr~a~d~l~iL~e~g~~----------------------------~~~vvi~H~~~~~~~~~a~~~l~ 231 (363)
T 3ovg_A 180 LTGCPILVHTQLGTMALEVAKHLIGFGAN----------------------------PDKIQISHLNKNPDKYYYEKVIK 231 (363)
T ss_dssp HHCCCEEEEEETTCSHHHHHHHHHHHTCC----------------------------GGGEEEECGGGSCCHHHHHHHHH
T ss_pred HhCCEEEEeCCCCCCHHHHHHHHHhcCCC----------------------------CCcEEEEcCCCCCCHHHHHHHHH
Confidence 99999999985321111333333222221 1246788997422224455555
Q ss_pred HcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCC--eEEEeCCCCCCChhhhhcCCCC
Q 009410 305 KAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI--LQLVGTDHCAFNSTQKAFGIDD 382 (535)
Q Consensus 305 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv--~~~lgtD~~~~~~~~~~~~~~~ 382 (535)
+.|..+..+.... ..+ . + .......++++++.|. ++.+.||.+ ........ +
T Consensus 232 ~~G~yI~f~g~~~-----------------~~~--~-~--~~~ra~~l~~lv~~~p~drILleTDap-~~~~l~~~---G 285 (363)
T 3ovg_A 232 ETGVTLCFDGPDR-----------------VKY--Y-P--DSLLAENIKYLVDKGLQKHITLSLDAG-RILYQRNY---G 285 (363)
T ss_dssp HHCCEEEECCTTC-----------------TTT--C-C--HHHHHHHHHHHHHTTCGGGEEECCCCC-SGGGSHHH---H
T ss_pred HCCcEEEECCeec-----------------ccc--C-C--hhHHHHHHHHHHHhcCCCeEEEeCCCC-CCcCCCCC---C
Confidence 7787765542210 000 0 0 0011245777888764 589999954 22211100 0
Q ss_pred ccc-C-cchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCccccCCCCccE
Q 009410 383 FRK-I-PNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADI 441 (535)
Q Consensus 383 ~~~-~-~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~GsI~~Gk~ADl 441 (535)
... . .++.. .+...+..+++..|+|.+++.++.|.||+++|++ +..+++.+||.-+-
T Consensus 286 ~~~g~~~n~p~-~l~~~~~~~a~~rGis~eei~~it~~Np~rlf~l-~~~~~~~~~~~~~~ 344 (363)
T 3ovg_A 286 LTKGKQTFGLA-YLFDRFLPLLKQVGVSKEAIFDILVNNPKRVLAF-DEKRNFDPLKVSKE 344 (363)
T ss_dssp HHTTEECCCTH-HHHHTHHHHHHHHTCCHHHHHHHHTHHHHHHTSC-CCCCCCCGGGSCHH
T ss_pred ccCCCCCCCcc-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHCC-CCcCccCcccCCHH
Confidence 000 0 00111 1222233444555799999999999999999999 56799999997654
No 74
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.73 E-value=1.1e-06 Score=83.20 Aligned_cols=247 Identities=11% Similarity=0.049 Sum_probs=125.8
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeee-cCChhhH
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (535)
+||+|+|+.... ...+.......+.++||++++.+... ......+....+..+..+..++++.... ....+..
T Consensus 5 ~iD~H~Hl~~~~----~~~~~~~~l~~~~~~Gv~~~v~~~~~--~~~~~~~~~l~~~~~~i~~~~G~hP~~~~~~~~~~~ 78 (264)
T 1xwy_A 5 MFDIGVNLTSSQ----FAKDRDDVVACAFDAGVNGLLITGTN--LRESQQAQKLARQYSSCWSTAGVHPHDSSQWQAATE 78 (264)
T ss_dssp CEEEEECTTSGG----GTTTHHHHHHHHHHTTCCEEEECCCS--HHHHHHHHHHHHHSTTEEEEECCCGGGGGGCCHHHH
T ss_pred EEEEeeCCCChh----hccCHHHHHHHHHHCCCCEEEEeCCC--HHHHHHHHHHHHhCCCEEEEEEECCcccccCCHHHH
Confidence 899999997641 11234444667889999999876432 1111122222222222222233332111 1122345
Q ss_pred HHHHHHHHHcCCCEEEE-EeecCCCCc---CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009410 186 DEMEVMVKEKGINSFKF-FMAYKGSFM---INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~-~~~~~~~~~---~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
+++.++....+..+++. .+++..... ...+.+++.++.|.++|+++.+|+... ..+.++.
T Consensus 79 ~~l~~~~~~~~~~~iGE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~~a--~~~~~~i-------------- 142 (264)
T 1xwy_A 79 EAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDA--HERFMTL-------------- 142 (264)
T ss_dssp HHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESC--HHHHHHH--------------
T ss_pred HHHHHHhcCCCeEEEEEeccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcCCc--hHHHHHH--------------
Confidence 66666653333334432 234321111 112458899999999999999998532 1112211
Q ss_pred cCChhhHHHHHHHHHHHHHhc---CCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeE
Q 009410 262 SRPPLLEGEATTRAIRLAEFV---NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (535)
.+.. ..++++ |+.+... +.++.+.+.|+.+..+.... .+.
T Consensus 143 -----------------l~~~~~~~~~~v~-H~~~g~~-~~~~~~~~~g~yi~~~g~~~------------~~~------ 185 (264)
T 1xwy_A 143 -----------------LEPWLDKLPGAVL-HCFTGTR-EEMQACVAHGIYIGITGWVC------------DER------ 185 (264)
T ss_dssp -----------------HGGGGGGSSCEEE-CSCCCCH-HHHHHHHHTTCEEEECGGGG------------CTT------
T ss_pred -----------------HHhcCCCCCcEEE-EccCCCH-HHHHHHHHCCeEEEECcccc------------CCc------
Confidence 1222 235544 9865443 66667777787665442210 000
Q ss_pred EcCCCCCcccHHHHHHHHhcC--CeEEEeCCCCCCChhhhhcCCCC-cccCcchHHHHHHHHHHHHHhcCCCCHHHHHHH
Q 009410 339 MSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDD-FRKIPNGIEERMHLVWDTMVESGQISVTDYVRL 415 (535)
Q Consensus 339 ~~p~~r~~~~~~~~~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~-~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~ 415 (535)
....++++++.. -+++++||. |+...... .+ +..-++. -..+...+..+....++|.+++.+.
T Consensus 186 ---------~~~~l~~~~~~~~~drll~eTD~-P~~~~~~~---~~~~~g~~n~-p~~~~~~~~~~a~~~g~~~e~~~~~ 251 (264)
T 1xwy_A 186 ---------RGLELRELLPLIPAEKLLIETDA-PYLLPRDL---TPKPSSRRNE-PAHLPHILQRIAHWRGEDAAWLAAT 251 (264)
T ss_dssp ---------TSHHHHHHGGGSCGGGEEECCCT-TSCCCTTC---TTCCCSSCCC-GGGHHHHHHHHHHHHTCCHHHHHHH
T ss_pred ---------CcHHHHHHHHhCCHHHEEEecCC-CCcCcccc---ccccCCCCCc-hHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 003355565542 369999996 33211100 00 1111110 0012222323323347999999999
Q ss_pred HhHHHHHHcCC
Q 009410 416 TSTECARIFNV 426 (535)
Q Consensus 416 ~T~~~A~~lgl 426 (535)
.+.|++++|++
T Consensus 252 ~~~Na~rl~~l 262 (264)
T 1xwy_A 252 TDANVKTLFGI 262 (264)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhCc
Confidence 99999999997
No 75
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=98.70 E-value=1.3e-06 Score=86.25 Aligned_cols=247 Identities=13% Similarity=0.052 Sum_probs=126.6
Q ss_pred HHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhc-ccccccceeeeeec---CChhhHHHHHHHHHH---cC-----
Q 009410 129 SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-NSCMDYGFHMAITK---WDEVVSDEMEVMVKE---KG----- 196 (535)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~g----- 196 (535)
..+..+.+.||+|++++...........+.+..+..+ ..+...|++..... ......+++.++... .|
T Consensus 90 ~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~y~~~~~P~~~~~~~~~~L~~~~~~ei~~Gi~~~~ 169 (364)
T 3k2g_A 90 AEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYYLASSMPETAARLSADDIADEIVAEALEGTDGTD 169 (364)
T ss_dssp HHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBCCGGGCCGGGGTCCHHHHHHHHHHHHHTCBTTBS
T ss_pred HHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCccCCCCCchhhccCCHHHHHHHHHHHHHhccccCC
Confidence 4456678899999999864322223344444443333 44555555521111 111123444333211 12
Q ss_pred --CCEEE-EEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCCCCcccccccCChhhHHHHH
Q 009410 197 --INSFK-FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGITGPEGHALSRPPLLEGEAT 272 (535)
Q Consensus 197 --~~~ik-~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 272 (535)
+..++ +..++ .......+.+++.++.|++.|+++.+|..+. ....+.++.+.+.|..
T Consensus 170 vkag~IGEiGld~-~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~e~l~iL~e~g~~------------------ 230 (364)
T 3k2g_A 170 ARIGLIGEIGVSS-DFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAHRVLDLVEEEGAD------------------ 230 (364)
T ss_dssp CCCSSEEEEECCT-TCCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHHHHHHHHHHTTCC------------------
T ss_pred cceeEEEEEEcCC-CCCHHHHHHHHHHHHHHHHHCCeEEEecCCCCccHHHHHHHHHHcCCC------------------
Confidence 23343 44444 1112235568888999999999999998421 2223333333222221
Q ss_pred HHHHHHHHhcCCCEEEEEccC-HHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHH
Q 009410 273 TRAIRLAEFVNTPLYVVHVMS-MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (535)
Q Consensus 273 ~~~~~~~~~~~~~~~~~H~~~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~ 351 (535)
..++.+.|+.. ....+....+.+.|+.+..+.......+... .+ ..|. .......
T Consensus 231 ----------~~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~g~gt~~~f~~~-----------~~-~~~~--d~~ra~~ 286 (364)
T 3k2g_A 231 ----------LRHTVLCHMNPSHMDPVYQATLAQRGAFLEFDMIGMDFFYADQ-----------GV-QCPS--DDEVARA 286 (364)
T ss_dssp ----------GGGEEECCCGGGTTCHHHHHHHHHHTCEEEECCTTCCCEETTT-----------TE-ECCC--HHHHHHH
T ss_pred ----------CCceEEECCCCCCCCHHHHHHHHhCCcEEEecCCccccccccc-----------cc-cccc--HHHHHHH
Confidence 12356779983 4134777778888987765432100000000 00 0000 0012245
Q ss_pred HHHHHhcC--CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 352 LQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 352 ~~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
++++++.| -++.+.||.. ....... +.. ++...-+.... ..+...|+|.+++.++.|.||+++|++.
T Consensus 287 l~~lv~~gp~drilleTD~p-~~~~~~~-----~gg--~~~~~l~~~~~-~~l~~~Gis~eei~~~~~~Np~rlf~l~ 355 (364)
T 3k2g_A 287 ILGLADHGYLDRILLSHDVF-VKMMLTR-----YGG--NGYAFVTKHFL-PRLRRHGLDDAALETLMVTNPRRVFDAS 355 (364)
T ss_dssp HHHHHHTTCGGGEEECCCCC-SGGGSGG-----GTS--CTTSHHHHHHH-HHHHHTTCCHHHHHHHHTHHHHHHHCTT
T ss_pred HHHHHHhCCcccEEEeCCCC-CCCCCCC-----CCC--CCcchHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHhCCC
Confidence 77888887 4689999953 2222111 111 11111122222 2223557999999999999999999984
No 76
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=98.63 E-value=2.2e-06 Score=84.54 Aligned_cols=246 Identities=13% Similarity=-0.010 Sum_probs=124.8
Q ss_pred HHHHHHHhCCcEEEeccccC-CCCChHHHHHHHHHHhc-ccccccceeeeee--cCChhhHHHHHHHH-H--HcCC----
Q 009410 129 SGQAAALAGGTTMHIDFVIP-INGSLTAGFEAYEKKAK-NSCMDYGFHMAIT--KWDEVVSDEMEVMV-K--EKGI---- 197 (535)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~--~~g~---- 197 (535)
..+..+.+.||||++++.+. ........+.+..+..+ ..+...|++.... ....+..+++.++. . ..|.
T Consensus 79 ~el~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~~~gi~i~~~tG~y~~~~~P~~~~~~~~~L~~~~~~ei~~gi~~t~ 158 (365)
T 3rhg_A 79 FELNNFKELGGKTIVDATGSSSIGRDIRKLKQVAELTGINVVASSGLYIEKFEGKRLADDIDAMAKMIDDELNIGIDGTD 158 (365)
T ss_dssp HHHHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHHHHCCEEECEECCCCHHHHGGGGGSCHHHHHHHHHHHHHTCSTTSS
T ss_pred HHHHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHHHHCCcEEEEeCccCCCCCchhhcCCHHHHHHHHHHHHHhccccCC
Confidence 34556788999999999722 22222333333333333 4444555552111 00000223333222 1 1222
Q ss_pred ---CEEE-EEeecCCCCcCCHHHHHHHHHHHHhc-CCeEEEEc-CChhhHHHHHHHHHHc-CCCCcccccccCChhhHHH
Q 009410 198 ---NSFK-FFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHA-ENGDAVFEGQKRMIEL-GITGPEGHALSRPPLLEGE 270 (535)
Q Consensus 198 ---~~ik-~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~-~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~ 270 (535)
..++ +.+++ .......+.+++.++.|.+. |+++.+|. .......+.++.+.+. +..
T Consensus 159 vkag~IGEiGld~-~~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e~l~iL~e~~~~~---------------- 221 (365)
T 3rhg_A 159 IRAGMIGEIGVSP-FFTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRRGDEVLDILLTEMGCD---------------- 221 (365)
T ss_dssp CCCCEEEEEECCT-TCCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCCHHHHHHHHTTTTCCC----------------
T ss_pred ceeEEEEEEEcCC-CCCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcCHHHHHHHHHhccCCC----------------
Confidence 3343 43332 11122246688888999999 99999997 4222223333333222 211
Q ss_pred HHHHHHHHHHhcCCCEEEEEcc-CHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCc-cc
Q 009410 271 ATTRAIRLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS-GH 348 (535)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~H~~-~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~-~~ 348 (535)
..++.+.|+. +....+....+.+.|+.+..+....... ++ .. .. . ... ..
T Consensus 222 ------------~~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~g~g~~~t-----f~-----~~-~~--~---~~d~~~ 273 (365)
T 3rhg_A 222 ------------PAKISLAHSDPSGKDIDYQCKMLDRGVWLEFDMIGLDIS-----FP-----KE-GA--A---PSVMDT 273 (365)
T ss_dssp ------------GGGEEESCCGGGTTCHHHHHHHHHTTCEEEECCTTCCCB-----CS-----SS-CB--C---CCHHHH
T ss_pred ------------CCceEEecCCCCCCCHHHHHHHHhCCCEEEecCCCcccc-----cc-----cc-cc--c---cchHHH
Confidence 0135678998 4133477778888998776543210000 00 00 00 0 001 12
Q ss_pred HHHHHHHHhcCC--eEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 349 NKALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 349 ~~~~~~~l~~Gv--~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
...++++++.|. ++.+.||.. ........+ . ++... +...+...++..|+|.+++.++.|.||+++|++
T Consensus 274 a~~l~~li~~g~~drilleTD~p-~l~~~~~~G-----~--~~~~~-l~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf~l 344 (365)
T 3rhg_A 274 VEAVATLIERGYGNQIVLSHDVF-LKQMWAKNG-----G--NGWGF-VPNVFLSLLAQRGIDKTIIDKLCIDNPANLLAA 344 (365)
T ss_dssp HHHHHHHHHTTCGGGEEECCCCC-SGGGSGGGT-----S--CTTTH-HHHTHHHHHHHTTCCHHHHHHHTTHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCcEEEeCCCC-CCCCCCcCC-----C--CCchh-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHCC
Confidence 245778888874 589999954 322221111 0 11111 111122334456799999999999999999998
Q ss_pred CC
Q 009410 427 YP 428 (535)
Q Consensus 427 ~~ 428 (535)
..
T Consensus 345 ~~ 346 (365)
T 3rhg_A 345 EN 346 (365)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 77
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=98.62 E-value=5.3e-07 Score=87.61 Aligned_cols=262 Identities=16% Similarity=0.139 Sum_probs=136.8
Q ss_pred cccccccccccccCC----------CCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHH-hccccccccee
Q 009410 106 GGIDPHTHLAMEFMG----------SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK-AKNSCMDYGFH 174 (535)
Q Consensus 106 GlID~H~H~~~~~~g----------~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 174 (535)
|+..+|=|+.....+ ....+.....+..+.+.|++|++|+.....+.....+....+. +-+.....|++
T Consensus 17 G~t~~HEHl~~~~~~~~~~~~~~~~l~~~~~~~~el~~~~~~G~~tiVd~t~~~~gR~~~~l~~is~~tgv~iv~~TG~y 96 (330)
T 3pnz_A 17 GFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFN 96 (330)
T ss_dssp CSEEEEECCSBCCHHHHTTTCGGGCBCCHHHHHHHHHHHHHTTCCEEEECCCGGGCBCHHHHHHHHHHHCCEEEEEEECC
T ss_pred CCceeccCceecChhhhhcCCCcccccCHHHHHHHHHHHHHhCCCEEEECCCCccccCHHHHHHHHHHhCCEEEEeCCCC
Confidence 677788887553100 0112233345566788999999999655444333444444433 33333333433
Q ss_pred eeee--------------------cC----C-hhhHHHHHHHHHHcCC-------CEEEEEeecCCCCcCCHHHHHHHHH
Q 009410 175 MAIT--------------------KW----D-EVVSDEMEVMVKEKGI-------NSFKFFMAYKGSFMINDELLIEGFK 222 (535)
Q Consensus 175 ~~~~--------------------~~----~-~~~~~~~~~~~~~~g~-------~~ik~~~~~~~~~~~~~~~l~~~~~ 222 (535)
.... .+ + ++..+.+..-+ ..|. ..+++.+++........+.+++.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~ei-~~Gi~~t~vkaGvIEiGld~~~~~~~q~~~f~aq~~ 175 (330)
T 3pnz_A 97 KSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEV-ENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVAR 175 (330)
T ss_dssp CGGGGGSBCCGGGHHHHCSCSBHHHHHHTSCHHHHHHHHHHHH-HTCSTTSSCCEEEEEEECBTTBCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccCchhhccCCHHHHHHHHHHHH-HhhCCCcCcCcCeEEEEcCCCCCCHHHHHHHHHHHH
Confidence 2110 00 1 11222222222 2333 2367777765333334677899999
Q ss_pred HHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc-CHHHHHHHH
Q 009410 223 RCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM-SMDAMEEIA 301 (535)
Q Consensus 223 ~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~-~~~~~~~~~ 301 (535)
.|++.|+++.+|........+.++.+.+.|.. ..++.+.||. +.+ .+...
T Consensus 176 ~A~~~glPViiH~r~g~~a~~~l~iL~e~~~~----------------------------~~~vvi~H~~~s~~-~e~a~ 226 (330)
T 3pnz_A 176 AHHETKAPIHSHTEAGTMALEQIEILKQENIP----------------------------LEYLSIGHMDRNLD-PYYHK 226 (330)
T ss_dssp HHHHHCCCEEEECGGGCCHHHHHHHHHHTTCC----------------------------GGGEEETTGGGSCC-HHHHH
T ss_pred HHHHHCCeEEEeCCCCcChHHHHHHHHHcCCC----------------------------CCeEEEecCCCCCC-HHHHH
Confidence 99999999999986421111223333222221 1235677985 444 36777
Q ss_pred HHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcC--CeEEEeCCCCCCChhhhhcC
Q 009410 302 KARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFG 379 (535)
Q Consensus 302 ~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~G--v~~~lgtD~~~~~~~~~~~~ 379 (535)
.+.+.|..+..+.... + .+ ++ .......+.++++.| -++.++||.+ .......
T Consensus 227 ~~l~~G~~i~~~g~~t-------------~----~~---~~--~~~~~~~l~~lv~~g~~drilleTD~p-~~~~~~~-- 281 (330)
T 3pnz_A 227 QVAKTGAFMSFDGIAK-------------I----KY---AP--ESARIAAILYLVSEGFEDQILVSGDTA-RKTYYKH-- 281 (330)
T ss_dssp HHHTTTCEEEECCTTC-------------T----TT---CC--HHHHHHHHHHHHHTTCGGGEEECCCCC-SGGGSHH--
T ss_pred HHHHcCcEEEEccCcc-------------c----CC---CC--hHHHHHHHHHHHHcCCCCeEEEeCCCC-CCCCCCc--
Confidence 7888897776542210 0 00 00 001123577778776 4589999954 2221110
Q ss_pred CCCcccCcchHHHHHHHHHHHH---HhcCCCCHHH-HHHHHhHHHHHHcCC
Q 009410 380 IDDFRKIPNGIEERMHLVWDTM---VESGQISVTD-YVRLTSTECARIFNV 426 (535)
Q Consensus 380 ~~~~~~~~~g~~~~l~~~~~~~---~~~~~ls~~e-al~~~T~~~A~~lgl 426 (535)
+..-+ +...-+...+.++ ++..|+|.++ +.++.|.||+++|++
T Consensus 282 ---~G~~~-~~~~~~~~~~~~l~~~a~~~Gis~ee~i~~~t~~Np~rlf~l 328 (330)
T 3pnz_A 282 ---YGHGP-GLEYIAKKWVPRFIDEANEKGFDGEKLVKKFFVDNPARCFTF 328 (330)
T ss_dssp ---HHCCS-TTTHHHHTHHHHHHHHHHHTTSCHHHHHHHHHTHHHHHHSSC
T ss_pred ---cCCCC-CcchHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhHHHHhcC
Confidence 00001 1111112222222 3456799998 999999999999998
No 78
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=98.58 E-value=2.3e-07 Score=92.19 Aligned_cols=145 Identities=13% Similarity=0.071 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccC
Q 009410 214 DELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (535)
Q Consensus 214 ~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 293 (535)
++.+.++++.|+++|+++.+|+..... | .+ . ..+..++. ..+.. .+.|+..
T Consensus 214 ~~~~~~~~~~A~~~gl~~~~HagE~~~-----------~----------~~-~---~~i~~al~---~lg~~-ri~Hgv~ 264 (371)
T 2pgf_A 214 LKEYKEIFDYVRESGVPLSVHAGEDVT-----------L----------PN-L---NTLYSAIQ---VLKVE-RIGHGIR 264 (371)
T ss_dssp GGGGHHHHHHHHHTTCCBEEEESCCTT-----------S----------SS-S---HHHHHHHH---TSCCS-EEEECGG
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCCCC-----------C----------Cc-h---HHHHHHHh---ccCCC-EEecchh
Confidence 778999999999999999999954310 0 00 0 11122222 22444 5789877
Q ss_pred HHH-HHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCC
Q 009410 294 MDA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (535)
Q Consensus 294 ~~~-~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~ 372 (535)
... .+.++.+++.|+.+..||.++.. .+.... ....++++++++|+++++|||+...
T Consensus 265 l~~~~~l~~~l~~~~i~v~~cP~SN~~-------------l~~~~~--------~~~~pi~~ll~~Gv~V~lgTD~~~~- 322 (371)
T 2pgf_A 265 VAESQELIDMVKEKNILLEVCPISNVL-------------LKNAKS--------MDTHPIRQLYDAGVKVSVNSDDPGM- 322 (371)
T ss_dssp GGGCHHHHHHHHHTTCEEEECHHHHHH-------------TTSSSC--------GGGCTHHHHHHTTCEEEECCBCHHH-
T ss_pred ccccHHHHHHHHHcCCeEEECcchhHH-------------hCCCCc--------cccChHHHHHHCCCeEEEeCCCCcc-
Confidence 643 14589999999999999986322 211000 0001289999999999999995432
Q ss_pred hhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 373 STQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 373 ~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
.... +...+... ....+++++++ +.+|.|++++.+++
T Consensus 323 ~~~~-------------l~~e~~~a----~~~~~l~~~~l-~~lt~ns~~asf~~ 359 (371)
T 2pgf_A 323 FLTN-------------INDDYEEL----YTHLNFTLEDF-MKMNEWALEKSFMD 359 (371)
T ss_dssp HTCC-------------HHHHHHHH----HHHHCCCHHHH-HHHHHHHHHHCCSC
T ss_pred cCCC-------------HHHHHHHH----HHHhCCCHHHH-HHHHHHHHHHHcCC
Confidence 1111 11122222 22347999996 88999999999874
No 79
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=98.52 E-value=2.6e-06 Score=80.72 Aligned_cols=246 Identities=17% Similarity=0.164 Sum_probs=122.3
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhccc---ccccceeeeeecCChh
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNS---CMDYGFHMAITKWDEV 183 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 183 (535)
+||+|+|+....... ...+.......+.+.||++++.+... ....+...+...+. ...++++..... ...
T Consensus 3 ~iD~H~Hl~~~~~~~-~~~~~~~~l~~~~~~Gv~~~v~~~~~-----~~~~~~~~~~~~~~p~~~~~~g~hP~~~~-~~~ 75 (265)
T 1yix_A 3 LVDSHCHLDGLDYES-LHKDVDDVLAKAAARDVKFCLAVATT-----LPSYLHMRDLVGERDNVVFSCGVHPLNQN-DPY 75 (265)
T ss_dssp EEEEEECGGGSCTTT-TCSSHHHHHHHHHHTTEEEEEECCSS-----HHHHHHHHHHHCSCTTEEEEECCCTTCCS-SCC
T ss_pred EEEEeeCCCchhhcc-cccCHHHHHHHHHHCCCCEEEEeCCC-----HHHHHHHHHHHHHCCCeEEEEEeCCCccc-ccc
Confidence 799999998651100 02234444677788999998865311 12222222222221 111222211110 001
Q ss_pred hHHHHHHHHHHcCCCEEEE-EeecCC---CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 184 VSDEMEVMVKEKGINSFKF-FMAYKG---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~-~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
..++++++.+......++. .+++.. ......+.+.+.++.|.++|+++.+|+.... .+..+.+
T Consensus 76 ~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~--~~~~~~l----------- 142 (265)
T 1yix_A 76 DVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRDAR--ADTLAIL----------- 142 (265)
T ss_dssp CHHHHHHHHTSTTEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCH--HHHHHHH-----------
T ss_pred hHHHHHHHhccCCeEEEEccccCCCcCCCChHHHHHHHHHHHHHHHHhCCCEEEEecCch--HHHHHHH-----------
Confidence 2466666553222222221 112211 1122356789999999999999999985321 1111111
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (535)
+.......++++ |+..... +.+..+.+.|+.+..+... .+..
T Consensus 143 -----------------~~~~~p~~~~v~-H~~~~~~-~~~~~~~~~g~~~~~sg~~-------------~~~~------ 184 (265)
T 1yix_A 143 -----------------REEKVTDCGGVL-HCFTEDR-ETAGKLLDLGFYISFSGIV-------------TFRN------ 184 (265)
T ss_dssp -----------------HHTTGGGTCEEE-TTCCSCH-HHHHHHHTTTCEEEECGGG-------------GSTT------
T ss_pred -----------------HhcCCCCCCEEE-EcCCCCH-HHHHHHHHCCcEEEECCcc-------------ccCc------
Confidence 111111345554 8876554 6666777777666544211 0000
Q ss_pred cCCCCCcccHHHHHHHHhc-C-CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHh
Q 009410 340 SPPIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTS 417 (535)
Q Consensus 340 ~p~~r~~~~~~~~~~~l~~-G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T 417 (535)
...+.++++. | -++++|||++ +.... ++..-++ ....+......+.+..+++.+++.+..+
T Consensus 185 ---------~~~~~~~~~~~~~drll~~TD~P-~~~~~------~~~g~~~-~~~~l~~~~~~l~~~~~~~~~~~~~i~~ 247 (265)
T 1yix_A 185 ---------AEQLRDAARYVPLDRLLVETDSP-YLAPV------PHRGKEN-QPAMVRDVAEYMAVLKGVAVEELAQVTT 247 (265)
T ss_dssp ---------CHHHHHHHHHSCGGGEEECCCBT-SCCCT------TCTTSCC-CGGGHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred ---------hHHHHHHHHhCChHHEEEecCCC-CCCCc------ccCCCCC-chHHHHHHHHHHHHHhCcCHHHHHHHHH
Confidence 0235555554 3 5689999963 32111 1111011 0001222222222324699999999999
Q ss_pred HHHHHHcCCC
Q 009410 418 TECARIFNVY 427 (535)
Q Consensus 418 ~~~A~~lgl~ 427 (535)
.|++++|+++
T Consensus 248 ~Na~rl~~l~ 257 (265)
T 1yix_A 248 DNFARLFHID 257 (265)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHhCcC
Confidence 9999999984
No 80
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=98.51 E-value=5.1e-06 Score=81.43 Aligned_cols=264 Identities=14% Similarity=0.126 Sum_probs=136.4
Q ss_pred cccccccccccccCCC--------Cch-hhh---HHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHh-cccccccc
Q 009410 106 GGIDPHTHLAMEFMGS--------ETI-DDF---FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA-KNSCMDYG 172 (535)
Q Consensus 106 GlID~H~H~~~~~~g~--------~~~-~~~---~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 172 (535)
|+.++|=|+...+.+. ... +.+ ...+..+.+.|+.|++|+.....+.....+.+..+.. -+.....|
T Consensus 52 G~tl~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~is~~tGv~IV~~TG 131 (360)
T 3tn4_A 52 GKTLIHEHFLFGYPGFQGDVTRGTFREDESLRVAVEAAEKMKRHGIQTVVDPTPNDCGRNPAFLRRVAEETGLNIICATG 131 (360)
T ss_dssp CSEESSCEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTCCEEEECCCTTTTCCHHHHHHHHHHHCCEEEEEEC
T ss_pred CCceeccCeeecChhhhcccccchhhhhhHHHHHHHHHHHHHhcCCCeEEECCCCCcCcCHHHHHHHHHHcCCCEEEeCc
Confidence 7788888875432111 111 111 2233456789999999997655543444444444433 23333334
Q ss_pred eeeeeecCC---------hhhHHHHHHHH-H--HcC-------CCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEE
Q 009410 173 FHMAITKWD---------EVVSDEMEVMV-K--EKG-------INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (535)
Q Consensus 173 ~~~~~~~~~---------~~~~~~~~~~~-~--~~g-------~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (535)
++....... ....+++.++. + ..| +..||...++..........+++.+++|++.|+++.+
T Consensus 132 ~y~~~~~~p~~~~~~~~~~~~~e~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~~~~t~~E~k~frA~a~aa~etG~Pv~i 211 (360)
T 3tn4_A 132 YYYEGEGAPPYFQFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVIKLASSKGRITEYEKMFFRAAARAQKETGAVIIT 211 (360)
T ss_dssp CCCGGGSCTHHHHHHHHHTCHHHHHHHHHHHHHHTCSTTSCCCCSEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred cccCcccCCcccchhhhcccCHHHHHHHHHHHHHhccccCCCcceEEEEEccCCCCCHHHHHHHHHHHHHHHHhCCcEEE
Confidence 332211000 00112222211 1 233 3456665444332233356789999999999999999
Q ss_pred EcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEE-ccCHHHHHHHHHHHHcCCcEEe
Q 009410 234 HAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH-VMSMDAMEEIAKARKAGQRVIG 312 (535)
Q Consensus 234 H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H-~~~~~~~~~~~~~~~~g~~v~~ 312 (535)
|........+.++.+.+.|.. ..++.+.| +.+.+. +..+.+.+.|+.+..
T Consensus 212 Ht~~~~~~~e~l~iL~eeG~~----------------------------~~~vvi~H~~~~~d~-~~~~~~l~~G~yl~f 262 (360)
T 3tn4_A 212 HTQEGTMGPEQAAYLLEHGAD----------------------------PKKIVIGHMCDNTDP-DYHRKTLAYGVYIAF 262 (360)
T ss_dssp ECSTTCCHHHHHHHHHHTTCC----------------------------GGGEEECCGGGCCCH-HHHHHHHTTTCEEEE
T ss_pred EcCcccCCHHHHHHHHHcCCC----------------------------CCceEEEcCCCCCCH-HHHHHHHHcCCEEEE
Confidence 996543323334444444432 12467889 455554 777788889987765
Q ss_pred ccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcC--CeEEEeCCCC------CCChhhhhcCCCCcc
Q 009410 313 EPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHC------AFNSTQKAFGIDDFR 384 (535)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~G--v~~~lgtD~~------~~~~~~~~~~~~~~~ 384 (535)
...-. + ..+ ..|+ .......+.++.+.| -+++++||.. |+.... ++.
T Consensus 263 D~iG~------~----------~~~-~~p~--d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~py~~p~------p~r 317 (360)
T 3tn4_A 263 DRFGI------Q----------GMV-GAPT--DEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPE------PFA 317 (360)
T ss_dssp CCTTC------C----------CST-TCCC--HHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCH------HHH
T ss_pred ccccc------c----------ccc-CCCC--hHHHHHHHHHHHHhcCcceEEEecCCCcccccCCCCCcc------ccc
Confidence 42210 0 000 0000 011124577888887 4599999952 221111 011
Q ss_pred cCcc--hHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHc
Q 009410 385 KIPN--GIEERMHLVWDTMVESGQISVTDYVRLTSTECARIF 424 (535)
Q Consensus 385 ~~~~--g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~l 424 (535)
...+ +....+...+-. ++..|+|.+++-++.+.||+++|
T Consensus 318 ~~~~~~~y~~i~~~~ip~-L~~~Gvs~e~I~~i~~~NP~rlf 358 (360)
T 3tn4_A 318 EMMKNWHVEHLFVNIIPA-LKNEGIRDEVLEQMFIGNPAALF 358 (360)
T ss_dssp HHTTTCSTTHHHHTHHHH-HHHTTCCHHHHHHHHTHHHHHHH
T ss_pred ccCCCCCchhHHHHHHHH-HHHcCCCHHHHHHHHHHhHHHHh
Confidence 0001 112222222222 23457999999999999999987
No 81
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=98.51 E-value=4.7e-06 Score=81.40 Aligned_cols=268 Identities=15% Similarity=0.095 Sum_probs=137.3
Q ss_pred cccccccccccccCCCC--------c-hhh---hHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHH-hcccccccc
Q 009410 106 GGIDPHTHLAMEFMGSE--------T-IDD---FFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK-AKNSCMDYG 172 (535)
Q Consensus 106 GlID~H~H~~~~~~g~~--------~-~~~---~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 172 (535)
|+..+|=|+.....+.. . .+. ....+..+.+.||+++++............+.+..+. +...+...|
T Consensus 32 G~t~~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~~~g~~i~~~tG 111 (339)
T 3gtx_A 32 GATLPHEHVIFGYPGYAGDVTLGPFDHAAALASCTETARALLARGIQTVVDATPNGCGRNPAFLREVSEATGLQILCATG 111 (339)
T ss_dssp CEEEEEEEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHCCEEECEEC
T ss_pred CCeeeccCeeccCcccccCCCccccchHHHHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHcCCcEEEEcC
Confidence 77888888755422111 1 111 2234456788999999998633222223333333333 334444555
Q ss_pred eeeee------ecCC---hhhHHHHHHHHHH---cC-------CCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEE
Q 009410 173 FHMAI------TKWD---EVVSDEMEVMVKE---KG-------INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (535)
Q Consensus 173 ~~~~~------~~~~---~~~~~~~~~~~~~---~g-------~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (535)
++..- .... ....+++.++... .| +..+++.++++.......+.+++.++.|.+.|+++.+
T Consensus 112 ~hp~~~~~~~~~~~~~~~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~~~~~~q~~~f~aq~~lA~~~glPVii 191 (339)
T 3gtx_A 112 FYYEGGGATTYFKFRASLGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRDAITPYEQLFFRAAARVQRETGVPIIT 191 (339)
T ss_dssp CCCTTTSSCHHHHHHHHHSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSSCCCHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CCccCccCCcCCcccccccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEE
Confidence 55421 0000 1122444433322 11 3455777777533333456788999999999999999
Q ss_pred EcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc-CHHHHHHHHHHHHcCCcEEe
Q 009410 234 HAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIG 312 (535)
Q Consensus 234 H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~-~~~~~~~~~~~~~~g~~v~~ 312 (535)
|........+.++.+.+.|.. ..++.+.|+. +.+ .+....+.+.|..+..
T Consensus 192 H~~~gr~a~~~~~iL~~~~~~----------------------------~~~~vi~H~~~~~~-~e~a~~~l~~G~~i~~ 242 (339)
T 3gtx_A 192 HTQEGQQGPQQAELLTSLGAD----------------------------PARIMIGHMDGNTD-PAYHRETLRHGVSIAF 242 (339)
T ss_dssp ECSTTCCHHHHHHHHHHTTCC----------------------------GGGEEECCGGGCCC-HHHHHHHHTTTCEEEE
T ss_pred eCCCCcCHHHHHHHHHHcCCC----------------------------cccEEEEccCCCCC-HHHHHHHHHcCcEEEE
Confidence 994321111223332222221 1235678997 444 4777778888977765
Q ss_pred ccccceEeeCcccccCcCccccceeEEcCCCCCc-ccHHHHHHHHhcCC--eEEEeCCCCCCChhhhhcCCCCccc-C--
Q 009410 313 EPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS-GHNKALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRK-I-- 386 (535)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~-~~~~~~~~~l~~Gv--~~~lgtD~~~~~~~~~~~~~~~~~~-~-- 386 (535)
+.... +. +...| .. .....++++++.|. ++.+.||.+........ ..|... .
T Consensus 243 ~g~~t------~~-----------~~~~p---~~~~~~~~l~~li~~~~~drilleTD~p~~~~~~P~--~~p~~~~~~~ 300 (339)
T 3gtx_A 243 DRIGL------QG-----------MVGTP---TDAERLSVLTTLLGEGYADRLLLSHDSIWHWLGRPP--AIPEAALPAV 300 (339)
T ss_dssp CCTTC------CS-----------STTCC---CHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCC--CCCGGGHHHH
T ss_pred ccCcc------cc-----------ccCCC---chHHHHHHHHHHHHhcCCCeEEEecCCCccccCCcc--cccccccccC
Confidence 43210 00 00000 00 11245777888764 58999995421000000 000000 0
Q ss_pred -cchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcC
Q 009410 387 -PNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 425 (535)
Q Consensus 387 -~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg 425 (535)
.++.. .+...+...++..|+|.+++.++.|.||+++|+
T Consensus 301 g~n~p~-~l~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 301 KDWHPL-HISDDILPDLRRRGITEEQVGQMTVGNPARLFG 339 (339)
T ss_dssp HTCSTT-HHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHC
T ss_pred CCCCch-hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 00111 222233344556689999999999999999985
No 82
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.49 E-value=2.2e-06 Score=79.88 Aligned_cols=233 Identities=16% Similarity=0.120 Sum_probs=128.0
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChhhHH
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (535)
|||+|+|+... . +.......+.+.||..+.- +... ..........+..+..+..+|+++.......+..+
T Consensus 3 liDtH~HL~~~--~-----d~~~vl~~a~~~gV~~i~v--~~~~-~~~~~~~~la~~~~~v~~~~GiHP~~~~~~~~~l~ 72 (254)
T 3gg7_A 3 LIDFHVHLDLY--P-----DPVAVARACEERQLTVLSV--TTTP-AAWRGTLALAAGRPHVWTALGFHPEVVSERAADLP 72 (254)
T ss_dssp CEEEEECGGGS--S-----SHHHHHHHHHHTTCEEEEC--CSSG-GGHHHHHGGGTTCTTEEECBCCCGGGTTTTGGGTH
T ss_pred eEEEeeCCCCC--C-----CHHHHHHHHHHCCCcEEEe--cCCH-HHHHHHHHHHHhCCCeEEEEeeCcccccccHHHHH
Confidence 89999999753 1 3444467778899998662 2111 12222222222223344455555532222224455
Q ss_pred HHHHHHHHcCCCEEE-EEeecCCC----CcCCHHHHHHHHHHHHhcCCeEE-EEcCChhhHHHHHHHHHHcCCCCccccc
Q 009410 187 EMEVMVKEKGINSFK-FFMAYKGS----FMINDELLIEGFKRCKSLGALAM-VHAENGDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 187 ~~~~~~~~~g~~~ik-~~~~~~~~----~~~~~~~l~~~~~~a~~~g~~v~-~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
.+.+++. ....+. +.+++.-. .....+.+++.++.|.++++|+. +|+.... .+.++.
T Consensus 73 ~l~~~~~--~~vaIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~a~--~~~~~i------------- 135 (254)
T 3gg7_A 73 WFDRYLP--ETRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRRAE--SEVLNC------------- 135 (254)
T ss_dssp HHHHHGG--GCSEEEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTTCH--HHHHHH-------------
T ss_pred HHHHHhh--hccEEEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCcH--HHHHHH-------------
Confidence 5655552 234443 33343211 11235668999999999999998 9996532 122221
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCC-CEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEE
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNT-PLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (535)
.+..+. ...+.|+.+.+. +.++.+.+.|+.+...... .
T Consensus 136 ------------------l~~~~~~~~~v~H~fsG~~-e~a~~~l~~G~yis~~g~~---------~------------- 174 (254)
T 3gg7_A 136 ------------------LEANPRSGTPILHWYSGSV-TELRRAISLGCWFSVGPTM---------V------------- 174 (254)
T ss_dssp ------------------HHHCGGGEEEEEETCCSCH-HHHHHHHHTTCEEEECHHH---------H-------------
T ss_pred ------------------HHHcCCCCcEEEEeCCCCH-HHHHHHHcCCcEEEECccc---------C-------------
Confidence 122211 123569887665 7777777888776544321 0
Q ss_pred cCCCCCcccHHHHHHHHhcC--CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHh
Q 009410 340 SPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTS 417 (535)
Q Consensus 340 ~p~~r~~~~~~~~~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T 417 (535)
+ ...++++++.- -++.+.||+ |+.... .-.+.|. .+...++.+.+..+++.+++.+..+
T Consensus 175 ----~----~~~~~~~v~~ip~drlLlETD~-P~~~~r------g~~n~P~----~v~~v~~~iA~~~g~~~ee~~~~~~ 235 (254)
T 3gg7_A 175 ----R----TQKGAALIRSMPRDRVLTETDG-PFLELD------GQAALPW----DVKSVVEGLSKIWQIPASEVERIVK 235 (254)
T ss_dssp ----T----SHHHHHHHHHSCGGGEEECCCT-TTSEET------TEECCGG----GHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred ----c----hHHHHHHHHHcCCCeEEEeCCC-CccccC------CCCCCHH----HHHHHHHHHHHHhCcCHHHHHHHHH
Confidence 0 02244444442 458999995 442110 0111222 2333333444445799999999999
Q ss_pred HHHHHHcCC
Q 009410 418 TECARIFNV 426 (535)
Q Consensus 418 ~~~A~~lgl 426 (535)
.|+.++|++
T Consensus 236 ~N~~~lf~~ 244 (254)
T 3gg7_A 236 ENVSRLLGT 244 (254)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHCC
Confidence 999999998
No 83
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=98.39 E-value=1.3e-05 Score=78.32 Aligned_cols=158 Identities=13% Similarity=0.065 Sum_probs=99.5
Q ss_pred cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHH
Q 009410 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTR 274 (535)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 274 (535)
.++.++.+..+. ...+++.+..+++.|++.|+++.+|+........ +..
T Consensus 163 ~~vvG~dL~g~E---~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~----------------------------i~~ 211 (343)
T 3rys_A 163 APIAGIGLDSAE---VGNPPSKFERLYQRAAEAGLRRIAHAGEEGPASY----------------------------ITE 211 (343)
T ss_dssp CCCCEEEEESCC---TTCCGGGGHHHHHHHHHTTCEEEEEESSSSCHHH----------------------------HHH
T ss_pred CCEEEEecCCcc---cCCCHHHHHHHHHHHHHCCCeEEEeeCCCCCHHH----------------------------HHH
Confidence 345666554322 2345678999999999999999999954432211 112
Q ss_pred HHHHHHhcCCCEEEEEccCHHH-HHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHH
Q 009410 275 AIRLAEFVNTPLYVVHVMSMDA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQ 353 (535)
Q Consensus 275 ~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~ 353 (535)
++. ..+.. .+.|+..... .++++.+++.|+.+..||+++.. .+..-. ....+++
T Consensus 212 al~---~lg~~-rIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~-------------l~~~~~--------~~~hPi~ 266 (343)
T 3rys_A 212 ALD---VLHVE-RIDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVR-------------LRAVDK--------LADHPLP 266 (343)
T ss_dssp HHH---TSCCS-EEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHH-------------TTSSSC--------GGGCSHH
T ss_pred HHh---cCCcc-eeeeeeeecCChHHHHHHHhcCCCeeEchhHHHH-------------hCCCCC--------cccchHH
Confidence 221 12333 4778876542 37899999999999999986322 211000 0001289
Q ss_pred HHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 354 AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 354 ~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
.++++|++++++||++..... . +...+.... ...++++++ ++.+|.|+.+.-.++
T Consensus 267 ~ll~~Gv~V~l~TDdp~~~~~-~-------------l~~E~~~a~----~~~~l~~~~-l~~l~~nsi~~sf~~ 321 (343)
T 3rys_A 267 EMLAIGLNVCVNSDDPAYFGG-Y-------------VDDNFEQLV----KVLEFSVPE-QATLAANSIRSSFAS 321 (343)
T ss_dssp HHHHTTCCEEECCBSTTTTTC-C-------------HHHHHHHHH----HHHCCCHHH-HHHHHHHHHHHSSSC
T ss_pred HHHHCCCeEEEeCCCccccCC-C-------------HHHHHHHHH----HHcCCCHHH-HHHHHHHHHHHHCCC
Confidence 999999999999996543222 1 122232222 234799999 588899999988774
No 84
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=98.37 E-value=1.2e-05 Score=77.48 Aligned_cols=253 Identities=15% Similarity=0.038 Sum_probs=136.7
Q ss_pred cccccccccccccC-C-----CCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhc-----cccccccee
Q 009410 106 GGIDPHTHLAMEFM-G-----SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-----NSCMDYGFH 174 (535)
Q Consensus 106 GlID~H~H~~~~~~-g-----~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 174 (535)
-|||+|+|+..... | ....++.......+...||..++..+.... .....++ ..+..+ ..+..+|++
T Consensus 27 ~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g~~~~-~~~~~~~-La~~~~~~~~~~v~~~~GiH 104 (325)
T 3ipw_A 27 QFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITSGCLN-DFKKAIE-IINKYQNLTNIKLVTTIGVH 104 (325)
T ss_dssp CEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCCSHH-HHHHHHH-HHHHHGGGCSSEEEEEECCC
T ss_pred CeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEccCCHH-HHHHHHH-HHHHCCCcccceEEEEEEEC
Confidence 49999999986511 1 011345666678889999999986643211 2222333 233333 344445555
Q ss_pred eeeec-CChh-hHHHHHHHHHHc--CCCEEE-EEeecCCCC----cCCHHHHHHHHHHHHh-cCCeEEEEcCChhhHHHH
Q 009410 175 MAITK-WDEV-VSDEMEVMVKEK--GINSFK-FFMAYKGSF----MINDELLIEGFKRCKS-LGALAMVHAENGDAVFEG 244 (535)
Q Consensus 175 ~~~~~-~~~~-~~~~~~~~~~~~--g~~~ik-~~~~~~~~~----~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~~~~~ 244 (535)
..... ...+ ..+.+.++++.. .+..|. +.+++.... ..-.+.+++.++.|.+ +++|+.+|+.... .+.
T Consensus 105 P~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~A~--~d~ 182 (325)
T 3ipw_A 105 PTRTNELKQEGYLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRKSW--SDL 182 (325)
T ss_dssp GGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEESCH--HHH
T ss_pred cchhhcCCchHHHHHHHHHHhcCCCCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCchH--HHH
Confidence 43221 1222 566777776432 333443 334543211 1224678899999999 9999999996432 222
Q ss_pred HHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcc
Q 009410 245 QKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDS 324 (535)
Q Consensus 245 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 324 (535)
++.+.+.+.. ..+. +.|+.+.+. ++++.+.+.|+.+....+.
T Consensus 183 l~iL~~~~~~----------------------------~~~g-ViH~FsGs~-e~a~~~l~lG~yis~~G~~-------- 224 (325)
T 3ipw_A 183 CQLNKELGYN----------------------------GCKG-VVHCFDGTE-EEMNQILNEGWDIGVTGNS-------- 224 (325)
T ss_dssp HHHHHHTTCT----------------------------TSCE-EECSCCCCH-HHHHHHHHTTCEEEECSGG--------
T ss_pred HHHHHhcCCC----------------------------CCcE-EEEECCCCH-HHHHHHHhcCcEEeeCccc--------
Confidence 2222221110 1233 559987775 7788888888777654321
Q ss_pred cccCcCccccceeEEcCCCCCcccHHHHHHHHhc--CCeEEEeCCCCCCChhhhh-------cCCCCc------------
Q 009410 325 WLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKA-------FGIDDF------------ 383 (535)
Q Consensus 325 ~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~--Gv~~~lgtD~~~~~~~~~~-------~~~~~~------------ 383 (535)
++ ....+ ++++. --++.+.||+ |+...... ...-|+
T Consensus 225 -~k--------------------~~~~~-~~v~~iPldrlLlETDa-P~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~ 281 (325)
T 3ipw_A 225 -LQ--------------------SIELL-NVMKQIPIERLHIETDC-PYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYV 281 (325)
T ss_dssp -GS--------------------SHHHH-HHHTTSCGGGEEECCCT-TSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCB
T ss_pred -cC--------------------cHHHH-HHHHhCCcccEEEeCCC-ccccccccccchhcccccCcccccccccccccc
Confidence 00 00112 33333 2348999994 44211000 000011
Q ss_pred --ccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 384 --RKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 384 --~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
.+-|. .+...++.+.+-.+++.+++.+..+.|.-++|++.
T Consensus 282 g~rNeP~----~v~~v~~~iA~l~g~~~eeva~~t~~Na~~lF~~~ 323 (325)
T 3ipw_A 282 QRRNEPS----NIIDIAIIMSSIKHISLFEFVNKVYSNSMNMYFPT 323 (325)
T ss_dssp TTCCCGG----GHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHSCC
T ss_pred CCcCcHH----HHHHHHHHHHHhhCcCHHHHHHHHHHHHHHHhCcC
Confidence 12222 23333434444457999999999999999999874
No 85
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=98.36 E-value=1.2e-05 Score=77.23 Aligned_cols=129 Identities=12% Similarity=-0.009 Sum_probs=71.1
Q ss_pred EeecccccccccccccCC-----CCc---hhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhccccccccee
Q 009410 103 VMPGGIDPHTHLAMEFMG-----SET---IDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFH 174 (535)
Q Consensus 103 vlPGlID~H~H~~~~~~g-----~~~---~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (535)
+=|++||+|+|+...-.. ... ..........+-+.||+.++-..........+.+....+..+..+..+
T Consensus 23 ~p~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~~~~~~n~~~~~~~~~~p~r~~g~--- 99 (294)
T 4i6k_A 23 MKMNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSFLGTNNQAMLNAIQQYPDRLKGI--- 99 (294)
T ss_dssp --CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCGGGTTCCHHHHHHHHHSTTTEEEE---
T ss_pred CCCCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCcccccchHHHHHHHHHCCCeEEEE---
Confidence 455799999999865110 000 233455566778899998875422111111122222222222211111
Q ss_pred eeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 175 MAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
.++.. . ...++++++. +.|+.++++.....+......+.+...++.|.++|+++.+|+..
T Consensus 100 ~~v~P-~-~~~~eL~~l~-~~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~~~ 159 (294)
T 4i6k_A 100 AVVQH-T-TTFNELVNLK-AQGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVELHAPP 159 (294)
T ss_dssp ECCCT-T-CCHHHHHHHH-TTTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEEECCH
T ss_pred EEeCC-c-ccHHHHHHHH-HCCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEEeeCc
Confidence 11111 1 1235666665 56888888654322222346689999999999999999999863
No 86
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=98.31 E-value=2.6e-05 Score=73.66 Aligned_cols=244 Identities=17% Similarity=0.120 Sum_probs=119.7
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeee-cCChhhH
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (535)
+||+|+|++.. . ...+.......+.+.||+.++.+.... ...+.+....+..+.....++++.... ...++..
T Consensus 2 ~iD~H~Hl~~~--~--~~~~~~~~l~~~~~~Gv~~~v~~~~~~--~~~~~~~~~~~~~p~~~~~~g~~P~~~~~~~~~~~ 75 (265)
T 2gzx_A 2 LIDTHVHLNDE--Q--YDDDLSEVITRAREAGVDRMFVVGFNK--STIERAMKLIDEYDFLYGIIGWHPVDAIDFTEEHL 75 (265)
T ss_dssp CEEEEECTTSG--G--GTTTHHHHHHHHHHTTCCEEEEEECSH--HHHHHHHHHHHHCTTEEEEECCCGGGGGGCCHHHH
T ss_pred eEEEeeCCCCc--c--cccCHHHHHHHHHHcCCCEEEEeCCCH--HHHHHHHHHHHhCCCEEEEEEeccCccccCCHHHH
Confidence 69999999765 1 112344446667789999888664321 112222222222222111122221110 1112345
Q ss_pred HHHHHHHHHcCCCEEEEE-eecC---CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009410 186 DEMEVMVKEKGINSFKFF-MAYK---GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~-~~~~---~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
+++.++.+..+..+++.. +++. .......+.+...++.|.++|+++.+|+.... .+..
T Consensus 76 ~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~--~~~~---------------- 137 (265)
T 2gzx_A 76 EWIESLAQHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNREAT--QDCI---------------- 137 (265)
T ss_dssp HHHHHHTTSTTEEEEEEEEEECSCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCH--HHHH----------------
T ss_pred HHHHHHhcCCCEEEEEeccCCCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEecccH--HHHH----------------
Confidence 555555422223333321 1221 11123456789999999999999999985431 1111
Q ss_pred cCChhhHHHHHHHHHHHHHhc---CCCEEEEEccCHHHHHHHHHHHH-cCCcEEeccccceEeeCcccccCcCcccccee
Q 009410 262 SRPPLLEGEATTRAIRLAEFV---NTPLYVVHVMSMDAMEEIAKARK-AGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~H~~~~~~~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (535)
++.+.. ..+++ .|+..... +.+..+.+ .|+.+..+... .+.
T Consensus 138 ---------------~~l~~~p~~~~~~i-~H~~~g~~-~~~~~~l~~~~~y~~~sg~~-------------~~~----- 182 (265)
T 2gzx_A 138 ---------------DILLEEHAEEVGGI-MHSFSGSP-EIADIVTNKLNFYISLGGPV-------------TFK----- 182 (265)
T ss_dssp ---------------HHHHHTTGGGTCEE-ETTCCSCH-HHHHHHHHTSCCEEEECGGG-------------GCS-----
T ss_pred ---------------HHHHhcCCCCCcEE-EEcCCCCH-HHHHHHHHHCCceEEeccee-------------ecC-----
Confidence 122222 24554 57665433 44555545 67655443211 000
Q ss_pred EEcCCCCCcccHHHHHHHHhc-C-CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHH
Q 009410 338 VMSPPIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRL 415 (535)
Q Consensus 338 ~~~p~~r~~~~~~~~~~~l~~-G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~ 415 (535)
. . ..+.++++. | -++++|||. |+.... ++...++ ....+......+....+++.++.-+.
T Consensus 183 --~-~-------~~~~~~i~~~~~dril~gSD~-P~~~~~------~~~g~~~-~~~~~~~~~~~l~~~~~~~~~~~~~i 244 (265)
T 2gzx_A 183 --N-A-------KQPKEVAKHVSMERLLVETDA-PYLSPH------PYRGKRN-EPARVTLVAEQIAELKGLSYEEVCEQ 244 (265)
T ss_dssp --S-C-------CHHHHHHHHSCTTTEEECCCT-TSCCCT------TCTTSCC-CGGGHHHHHHHHHHHTTCCHHHHHHH
T ss_pred --C-c-------HHHHHHHHhCChhhEEEccCC-CCCCCc------ccCCCCC-ChHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 0 0 124555554 3 579999995 332211 1111111 00012222323333357999999999
Q ss_pred HhHHHHHHcCCC
Q 009410 416 TSTECARIFNVY 427 (535)
Q Consensus 416 ~T~~~A~~lgl~ 427 (535)
.+.|++++|++.
T Consensus 245 ~~~Na~rl~~~~ 256 (265)
T 2gzx_A 245 TTKNAEKLFNLN 256 (265)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHhCCc
Confidence 999999999984
No 87
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=98.30 E-value=3.7e-06 Score=81.17 Aligned_cols=127 Identities=12% Similarity=0.055 Sum_probs=65.8
Q ss_pred cccccccccccccCCC------CchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcc---cccccceeee
Q 009410 106 GGIDPHTHLAMEFMGS------ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN---SCMDYGFHMA 176 (535)
Q Consensus 106 GlID~H~H~~~~~~g~------~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 176 (535)
.+||+|+|+....... ....+.......+.+.||++++..+.. . ...+...+...+ .+..+|++..
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~~----~-~~~~~~~~la~~~~~v~~~~GiHP~ 76 (301)
T 2xio_A 2 KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGN----L-QDSKDALHLAQTNGMFFSTVGCHPT 76 (301)
T ss_dssp CEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCCS----H-HHHHHHHHHHTTCTTEEEEECCCGG
T ss_pred eEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCCC----H-HHHHHHHHHHHHCCCEEEEEEECcC
Confidence 5899999987651100 001344555677788999999877421 1 222222222222 2222333221
Q ss_pred eec-C----ChhhHHHHHHHHHHc--CCCEEE-EEeecCC-C-C--cCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 177 ITK-W----DEVVSDEMEVMVKEK--GINSFK-FFMAYKG-S-F--MINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 177 ~~~-~----~~~~~~~~~~~~~~~--g~~~ik-~~~~~~~-~-~--~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
... . ..+..+++.+++... .+..++ +.+++.- . . ....+.+++.++.|.++++++.+|+..
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r~ 149 (301)
T 2xio_A 77 RCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRN 149 (301)
T ss_dssp GTHHHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEES
T ss_pred hhhhCcccccHHHHHHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecC
Confidence 110 0 012345566655321 233443 2334321 0 1 112367899999999999999999953
No 88
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=98.21 E-value=1.9e-05 Score=74.74 Aligned_cols=244 Identities=18% Similarity=0.155 Sum_probs=122.0
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeee-cCChhhH
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (535)
++|.|+|+... ....+.......+-++||+.++.+... ......+....+..+..+..++++.... ....+..
T Consensus 13 ~~~~~~hl~~~----~~~~~~~~~l~~~~~~GV~~~v~~~~~--~~~~~~~~~l~~~~p~i~~~~G~hP~~~~~~~~~~~ 86 (268)
T 1j6o_A 13 MVDTHAHLHFH----QFDDDRNAVISSFEENNIEFVVNVGVN--LEDSKKSLDLSKTSDRIFCSVGVHPHDAKEVPEDFI 86 (268)
T ss_dssp EEEEEECTTSG----GGTTTHHHHHHTTTTTTEEEEEEECSS--HHHHHHHHHHHTTCTTEEEEECCCGGGGGGCCTTHH
T ss_pred ccccccCCCCh----hhccCHHHHHHHHHHcCCCEEEEeCCC--HHHHHHHHHHHHHCCCEEEEEeeccccccccCHHHH
Confidence 68999999764 122334444566678999998876421 1111122222222122122222222111 1112345
Q ss_pred HHHHHHHHHcCCCEEEE-EeecCC---CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009410 186 DEMEVMVKEKGINSFKF-FMAYKG---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~-~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
+++.++........++. .+++.- ......+.+...++.|.++|+++.+|+.... ....
T Consensus 87 ~~l~~~~~~~~~~~iGe~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~~~~--~~~~---------------- 148 (268)
T 1j6o_A 87 EHLEKFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIRDAY--SEAY---------------- 148 (268)
T ss_dssp HHHHHHTTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCH--HHHH----------------
T ss_pred HHHHHHhccCCEEEEEccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEeCchH--HHHH----------------
Confidence 55655542212222221 123221 1123467789999999999999999985321 1111
Q ss_pred cCChhhHHHHHHHHHHHHHhc---CCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeE
Q 009410 262 SRPPLLEGEATTRAIRLAEFV---NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (535)
++.... ..++++ |+..... +.+..+.+.|+.+...... .+
T Consensus 149 ---------------~il~~~p~~~~~~I~-H~~~g~~-~~~~~~~~~g~y~~~sg~~-------------------~~- 191 (268)
T 1j6o_A 149 ---------------EILRTESLPEKRGVI-HAFSSDY-EWAKKFIDLGFLLGIGGPV-------------------TY- 191 (268)
T ss_dssp ---------------HHHHHSCCCSSCEEE-TTCCSCH-HHHHHHHHHTEEEEECGGG-------------------GC-
T ss_pred ---------------HHHHhcCCCCCCEEE-EcCCCCH-HHHHHHHHCCCeEEecccc-------------------cc-
Confidence 112222 345666 9876554 5666666667555433211 00
Q ss_pred EcCCCCCcccHHHHHHHHhc-C-CeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 009410 339 MSPPIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLT 416 (535)
Q Consensus 339 ~~p~~r~~~~~~~~~~~l~~-G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~ 416 (535)
+ + ...++++++. | -+++++||. |+.... ++...++.. ..+......+.+..++|.++.-+..
T Consensus 192 ---~-~----~~~l~~~i~~~~~driL~eTD~-P~~~~~------~~~g~~n~p-~~~~~~~~~la~~~~~~~e~~~~i~ 255 (268)
T 1j6o_A 192 ---P-K----NEALREVVKRVGLEYIVLETDC-PFLPPQ------PFRGKRNEP-KYLKYVVETISQVLGVPEAKVDEAT 255 (268)
T ss_dssp ---T-T----CHHHHHHHHHHCGGGEEECCCB-TSCCCG------GGTTSCCCG-GGHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred ---c-c----hHHHHHHHHhCChhhEEEecCC-CCCCCc------ccCCCCCch-HHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 0 0 0234444443 2 569999995 332221 111111100 0122223233232469999999999
Q ss_pred hHHHHHHcCCC
Q 009410 417 STECARIFNVY 427 (535)
Q Consensus 417 T~~~A~~lgl~ 427 (535)
+.|+.++|++.
T Consensus 256 ~~Na~rlf~l~ 266 (268)
T 1j6o_A 256 TENARRIFLEV 266 (268)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHhCcc
Confidence 99999999873
No 89
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=98.20 E-value=2.4e-05 Score=76.93 Aligned_cols=141 Identities=13% Similarity=0.037 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCH
Q 009410 215 ELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM 294 (535)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 294 (535)
+.+..+++.|++.|+++.+|+........ +..++. ..+.. .+.|+...
T Consensus 192 ~~f~~~f~~A~~~gl~~~~HagE~~~~~~----------------------------i~~al~---~lg~~-RIgHgv~l 239 (367)
T 3iar_A 192 PGHVQAYQEAVKSGIHRTVHAGEVGSAEV----------------------------VKEAVD---ILKTE-RLGHGYHT 239 (367)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSSSCHHH----------------------------HHHHHH---TSCCS-EEEECGGG
T ss_pred HHHHHHHHHHHHcCCeeEEecCCcCChHH----------------------------HHHHHH---ccCCc-eeeeeeee
Confidence 68899999999999999999954432211 111111 12333 47888665
Q ss_pred HH-HHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCCCCCh
Q 009410 295 DA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNS 373 (535)
Q Consensus 295 ~~-~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~~~~~ 373 (535)
.. .++++.+++.|+.+..||+++.. .+... . ....+++.++++|++++++||++.. .
T Consensus 240 ~~d~~l~~~l~~~~i~le~cP~SN~~-------------l~~~~----~----~~~hPi~~ll~~Gv~v~l~TDdp~~-~ 297 (367)
T 3iar_A 240 LEDQALYNRLRQENMHFEICPWSSYL-------------TGAWK----P----DTEHAVIRLKNDQANYSLNTDDPLI-F 297 (367)
T ss_dssp GGCHHHHHHHHHTTCEEEECHHHHHH-------------TSSSC----T----TSCCHHHHHHHTTCCEEECCBSHHH-H
T ss_pred cCCHHHHHHHHhCCcEEEECHHHHHH-------------hCCCC----C----cccChHHHHHHCCCEEEECCCCccc-c
Confidence 32 26899999999999999986322 21100 0 0013489999999999999995332 1
Q ss_pred hhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 374 TQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 374 ~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
.. .+...+. .+....|+++++ ++.+|.|+++.-.++
T Consensus 298 ~~-------------~l~~e~~----~a~~~~glt~~e-l~~l~~nsi~~sf~~ 333 (367)
T 3iar_A 298 KS-------------TLDTDYQ----MTKRDMGFTEEE-FKRLNINAAKSSFLP 333 (367)
T ss_dssp TC-------------CHHHHHH----HHHHHHCCCHHH-HHHHHHHHHHTSSSC
T ss_pred CC-------------CHHHHHH----HHHHHcCCCHHH-HHHHHHHHHHHhCCC
Confidence 11 0111222 233344799999 788899999887764
No 90
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=98.17 E-value=2e-06 Score=83.38 Aligned_cols=156 Identities=13% Similarity=0.069 Sum_probs=96.0
Q ss_pred CCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHH
Q 009410 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 275 (535)
++.++.+..+. ...+++.+.++++.|++.|+++.+|+........ +..+
T Consensus 161 ~vvG~dL~g~E---~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~----------------------------i~~a 209 (326)
T 3pao_A 161 AFIAVGLDSSE---VGHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEY----------------------------IWEA 209 (326)
T ss_dssp GCSEEEEESCC---TTCCGGGGHHHHHHHHHTTCEECEEESSSSCHHH----------------------------HHHH
T ss_pred cceeeCCCCCC---CCCCHHHHHHHHHHHHHcCCceeeecCCCCCHHH----------------------------HHHH
Confidence 56666654322 2235678899999999999999999954422211 1112
Q ss_pred HHHHHhcCCCEEEEEccCHHH-HHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHH
Q 009410 276 IRLAEFVNTPLYVVHVMSMDA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQA 354 (535)
Q Consensus 276 ~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~ 354 (535)
+. ..+.. .+.|+..... .++++.+++.|+.+..||+++.....-. .+. . .++++
T Consensus 210 l~---~lg~~-rigHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~~~-----------~~~-~---------hPi~~ 264 (326)
T 3pao_A 210 LD---LLKVE-RIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFD-----------DMS-Q---------HTILD 264 (326)
T ss_dssp HH---TTCCS-SEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTSSS-----------SGG-G---------CCHHH
T ss_pred Hh---cCCCc-eeeeeeeecccHHHHHHHHHcCCeEEECchhHHHhCCCC-----------Ccc-c---------ChHHH
Confidence 21 11222 2678866542 2689999999999999998632211100 000 1 12899
Q ss_pred HHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 355 ALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 355 ~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
++++|++++++||++..... . +...+. .+....++++++ ++.+|.|+++.-.+
T Consensus 265 ll~~Gv~V~l~TDdp~~~~~-~-------------l~~e~~----~a~~~~~l~~~~-l~~l~~nsi~~sf~ 317 (326)
T 3pao_A 265 MLERGVKVTVNSDDPAYFGG-Y-------------VTENFH----ALQQSLGMTEEQ-ARRLAQNSLDARLV 317 (326)
T ss_dssp HHHHTCCEEECCBSHHHHTC-C-------------HHHHHH----HHHHHHCCCHHH-HHHHHHHHHHTCC-
T ss_pred HHHCCCeEEEeCCCcccCCC-C-------------HHHHHH----HHHHHcCCCHHH-HHHHHHHHHHHHHh
Confidence 99999999999996432111 1 112222 223334799999 58889999987766
No 91
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=98.16 E-value=6.2e-05 Score=71.40 Aligned_cols=160 Identities=13% Similarity=0.102 Sum_probs=91.4
Q ss_pred hhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc-CCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009410 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
+..++++++.++.|..+++.+.... . ..+.+..+++.|.++ |+++.+|+......
T Consensus 102 ~~~~el~~~~~~~g~~gi~~~g~~~---~-~~~~~~~~~~~a~~~~~lpv~iH~~~~~~~-------------------- 157 (272)
T 3cjp_A 102 DTNSYIEENIVNNKLVGIGELTPAS---G-QIKSLKPIFKYSMDSGSLPIWIHAFNPLVL-------------------- 157 (272)
T ss_dssp HHHHHHHHHTTTTTCSEEEEECCCT---T-CGGGGHHHHHHHHHTTCCCEEECCSTTCCH--------------------
T ss_pred HHHHHHHHHHHhcCceEEEecCCCC---C-ccHHHHHHHHHHHhccCCcEEEeCCCCCcc--------------------
Confidence 4556666655457888988653221 2 567899999999999 99999998643110
Q ss_pred cCChhhHHHHHHHHHHHHHhc-CCCEEEEEccCHHHHHHHHHHHH-cCCcEEeccccceEeeCcccccCcCccccceeEE
Q 009410 262 SRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARK-AGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~~~~~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (535)
.......++.+.+ +.++++.|+......+.++.+++ .| +...++.. +
T Consensus 158 --------~~~~~~~~~l~~~p~l~iv~~H~G~~~~~~~~~~~~~~~~--~y~~~s~~-------------------~-- 206 (272)
T 3cjp_A 158 --------QDIKEIAELCKAFPKVPVILGHMGGSNWMTAVELAKEIQN--LYLDTSAY-------------------F-- 206 (272)
T ss_dssp --------HHHHHHHHHHHHSTTSCEEEGGGGGGGHHHHHHHHHHCTT--EEEECTTC-------------------S--
T ss_pred --------ccHHHHHHHHHHCCCceEEEECCCCccHHHHHHHHHhCCC--EEEEeccc-------------------c--
Confidence 0111222233333 45777778766543344444443 23 33222110 0
Q ss_pred cCCCCCcccHHHHHHHHh-cCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhH
Q 009410 340 SPPIRASGHNKALQAALA-TGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTST 418 (535)
Q Consensus 340 ~p~~r~~~~~~~~~~~l~-~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~ 418 (535)
. ...+..+++ -+-++++|||. |+.... ... ..+...+++.++.-+....
T Consensus 207 ----~----~~~~~~~~~~~~dril~gSD~-P~~~~~----------------~~~-----~~~~~~~l~~~~~~~i~~~ 256 (272)
T 3cjp_A 207 ----S----TFVLKIVINELPLKCIFGTDM-PFGDLQ----------------LSI-----EAIKKMSNDSYVANAVLGD 256 (272)
T ss_dssp ----C----HHHHHHHHHHSTTTEECCCCT-TSSCHH----------------HHH-----HHHHHHCSSHHHHHHHHTH
T ss_pred ----c----HHHHHHHHHhCCCeEEEeCCC-CCCChH----------------HHH-----HHHHhcCCCHHHHHHHHHH
Confidence 0 012333333 25789999995 432111 011 1112246999999999999
Q ss_pred HHHHHcCCC
Q 009410 419 ECARIFNVY 427 (535)
Q Consensus 419 ~~A~~lgl~ 427 (535)
|+++++|++
T Consensus 257 Na~rl~~l~ 265 (272)
T 3cjp_A 257 NISRLLNIE 265 (272)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHhCcc
Confidence 999999984
No 92
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=98.13 E-value=2.5e-05 Score=74.77 Aligned_cols=127 Identities=9% Similarity=-0.003 Sum_probs=70.7
Q ss_pred cccccccccccccC----C----CCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeee
Q 009410 106 GGIDPHTHLAMEFM----G----SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI 177 (535)
Q Consensus 106 GlID~H~H~~~~~~----g----~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (535)
++||+|+|++.... + .............+-+.||+..+-..........+.+....+..+.....+ .++
T Consensus 13 ~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~n~~~~~~~~~~p~r~~~~---~~v 89 (288)
T 2ffi_A 13 TAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLGTDNRYLLSALQTVPGQLRGV---VML 89 (288)
T ss_dssp CCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGTTCCHHHHHHHHHSTTTBCCB---BCC
T ss_pred CceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccccccHHHHHHHHHHCCCCEEEE---EEe
Confidence 79999999976410 0 000122334455567899997764421101111122222222222211111 111
Q ss_pred ecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 178 TKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
.... ..++++++. +.|+.++++...+.+......+.+..+++.|.++|+++.+|....
T Consensus 90 ~p~~--~~~el~~~~-~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~ 147 (288)
T 2ffi_A 90 ERDV--EQATLAEMA-RLGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQVA 147 (288)
T ss_dssp CSSC--CHHHHHHHH-TTTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSCTT
T ss_pred CCCC--CHHHHHHHH-HCCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEeechh
Confidence 1111 135676766 568999988766543334566789999999999999999998643
No 93
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=97.99 E-value=0.00013 Score=71.02 Aligned_cols=55 Identities=11% Similarity=0.070 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHcCCCEEEEEeecCC-----CCcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 183 VVSDEMEVMVKEKGINSFKFFMAYKG-----SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~-----~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
+..++++++.++.|+.++++...+.. ...+..+.+..+++.|.++|+++.+|...
T Consensus 108 ~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 167 (327)
T 2dvt_A 108 AATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHPRN 167 (327)
T ss_dssp HHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEECCCC
Confidence 36777888775679999998766531 23456778999999999999999999854
No 94
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.88 E-value=0.00022 Score=66.75 Aligned_cols=117 Identities=13% Similarity=0.026 Sum_probs=63.4
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEeccccCCCC--ChH---HHHHHHH-------HHh-cccccccce
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING--SLT---AGFEAYE-------KKA-KNSCMDYGF 173 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~--~~~---~~~~~~~-------~~~-~~~~~~~~~ 173 (535)
|||+|+|+... . .+ ....+...||+.++..+..... ... +.++... +.. ...+..+|+
T Consensus 2 ~iDtH~Hld~~--~---~~----~l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~v~~~~Gi 72 (261)
T 3guw_A 2 YFDSHLHSEGL--G---FS----ELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGI 72 (261)
T ss_dssp CCBCCCCGGGC--C---HH----HHHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTTCEECCBCCC
T ss_pred eEEeccCCCCC--C---hH----HHHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
Confidence 79999999754 2 11 2456788999999866433211 111 2222222 111 123444555
Q ss_pred eeeeecCChhhHHHHHHHHHHcCCCEEE-EEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 174 HMAITKWDEVVSDEMEVMVKEKGINSFK-FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~g~~~ik-~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
++..... .. ++..+..++..+.++. +.+++. .....+.+++.++.|+++++|+.+|+..
T Consensus 73 HP~~~~~--~~-~~~~~~l~~~~vvaIGEiGLD~~--~~~Q~~~f~~ql~lA~e~~lPv~iH~r~ 132 (261)
T 3guw_A 73 HPRCIPP--DY-EFVLGYLEEGEWVAFGEIGLELV--TDEEIEVLKSQLELAKRMDVPCIIHTPR 132 (261)
T ss_dssp CGGGCCT--TT-HHHHHHHTTSCCSCEEEEECSSC--CHHHHHHHHHHHHHHHHHTCCEEEECCS
T ss_pred Ccccccc--cH-HHHHHHhCcCCeEEEEEecCCCC--hHHHHHHHHHHHHHHHHhCCeEEEEcCC
Confidence 5432211 11 2222223234555554 334442 1223567899999999999999999964
No 95
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=97.78 E-value=0.00053 Score=65.93 Aligned_cols=152 Identities=14% Similarity=0.085 Sum_probs=85.5
Q ss_pred EEeeccccccccccccc-----C-C-CCch--hhhHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhccccccc
Q 009410 102 FVMPGGIDPHTHLAMEF-----M-G-SETI--DDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDY 171 (535)
Q Consensus 102 ~vlPGlID~H~H~~~~~-----~-g-~~~~--~~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 171 (535)
.+=||.||+|.|++... . + ...+ -..+.....+-+.||+..+-....... .....++...+...+ +..+
T Consensus 22 ~~p~~~iDaH~H~~~~~~~~p~~~~~~~~~~~~~~e~l~~~m~~~GI~~~Vlvq~~~~~~dN~~ll~~l~~~~~r-~~Gv 100 (303)
T 4d9a_A 22 TPPPGAIDAHCHVFGPMAQFPFSPKAKYLPRDAGPDMLFALRDHLGFARNVIVQASCHGTDNAATLDAIARAQGK-ARGI 100 (303)
T ss_dssp CCCTTCEEEEECCBCCTTTSCCCTTCSCCBCCBCHHHHHHHHHHHTCSEEEEECCGGGTTCCHHHHHHHHHTTTS-EEEE
T ss_pred CCCCCceEeeeEeecCcccCCCCCCCCCcCCCCCHHHHHHHHHHcCCCeEEEeccccccccHHHHHHHHHhCCCc-EEEE
Confidence 34568999999998631 0 0 0111 122333445557899877643211111 122222323322221 1111
Q ss_pred ceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHc
Q 009410 172 GFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIEL 251 (535)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~ 251 (535)
. ..... ...++++++. +.|..++++.........++.+.+..+++.+.+ |+.+.+|+....
T Consensus 101 a----~vdp~-~~~~eL~~l~-~~G~rGvR~~~~~~~~~~~~~~~~~~~~~~l~~-gl~v~l~~~~~~------------ 161 (303)
T 4d9a_A 101 A----VVDPA-IDEAELAALH-EGGMRGIRFNFLKRLVDDAPKDKFLEVAGRLPA-GWHVVIYFEADI------------ 161 (303)
T ss_dssp E----CCCTT-CCHHHHHHHH-HTTEEEEEEECCTTTCSCCCHHHHHHHHTSCCT-TCEEEEECCGGG------------
T ss_pred E----EeCCC-CCHHHHHHHH-HCCCCEEEeecccCCccccCHHHHHHHHHHHhc-CCEEEEeccccc------------
Confidence 1 11111 1235666665 569999998765431235688899999999999 999999986432
Q ss_pred CCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccC
Q 009410 252 GITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (535)
Q Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 293 (535)
+..+.+++..++.++++.|+..
T Consensus 162 --------------------l~~l~~~~~~~~~~iVidH~G~ 183 (303)
T 4d9a_A 162 --------------------LEELRPFMDAIPVPIVIDHMGR 183 (303)
T ss_dssp --------------------HHHHHHHHHHCSSCEEEGGGGC
T ss_pred --------------------HHHHHHHHHHCCCcEEEeCCCC
Confidence 2223344555578899999875
No 96
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=97.78 E-value=0.00074 Score=65.03 Aligned_cols=56 Identities=9% Similarity=0.131 Sum_probs=43.5
Q ss_pred hhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
++..++++++.++.|..++++...+.+. ....+.+..+++.|.++|+++.+|....
T Consensus 103 ~~~~~el~~~~~~~g~~gi~~~~~~~~~-~~~~~~~~~~~~~a~~~~lpv~iH~~~~ 158 (307)
T 2f6k_A 103 LDAVKTVQQALDQDGALGVTVPTNSRGL-YFGSPVLERVYQELDARQAIVALHPNEP 158 (307)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEESEETTE-ETTCGGGHHHHHHHHTTTCEEEEECCCC
T ss_pred HHHHHHHHHHHhccCCcEEEEeccCCCC-CCCcHhHHHHHHHHHHcCCeEEECCCCC
Confidence 4566778777756799999987766442 3455789999999999999999998643
No 97
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=97.40 E-value=0.0042 Score=61.23 Aligned_cols=132 Identities=12% Similarity=0.069 Sum_probs=71.8
Q ss_pred ecccccccccccccC-C-----CCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcc-----cccccce
Q 009410 105 PGGIDPHTHLAMEFM-G-----SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN-----SCMDYGF 173 (535)
Q Consensus 105 PGlID~H~H~~~~~~-g-----~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 173 (535)
+-|||+|+|+..... + ....+++......+...||+.++..+.... .....++... ..+. .+..+|.
T Consensus 12 ~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g~~l~-~s~~~~~La~-~~~~~~~~~l~~tvGv 89 (401)
T 3e2v_A 12 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGSSIA-ESQSAIELVS-SVKDLSPLKLYHTIGV 89 (401)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCCSHH-HHHHHHHHHH-HHTTTCSSEEEEEECC
T ss_pred CCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEecCCHH-HHHHHHHHHH-HCCCccccceEEEEEE
Confidence 469999999987511 1 112356667788889999999886532211 2233333222 2222 2444555
Q ss_pred eeeeec-CCh------------------------------------hhHHHHHHHHHH------cCCCEEE-EEeecCCC
Q 009410 174 HMAITK-WDE------------------------------------VVSDEMEVMVKE------KGINSFK-FFMAYKGS 209 (535)
Q Consensus 174 ~~~~~~-~~~------------------------------------~~~~~~~~~~~~------~g~~~ik-~~~~~~~~ 209 (535)
|..... ... +..+++..++++ ..+..|. +.++|...
T Consensus 90 HP~~~~e~~~~~~~~~~~~~~~~p~~d~~~~~~l~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~vvAIGEiGLDy~~~ 169 (401)
T 3e2v_A 90 HPCCVNEFADASQGDKASASIDNPSMDEAYNESLYAKVISNPSFAQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRF 169 (401)
T ss_dssp CGGGGGGGC------------------CHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHCSTTCSEEEEEEEEEETTCT
T ss_pred CcChhhhcccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHhhhhccCCcEEEEEEEeCCCCcC
Confidence 542111 000 124455555422 1223333 44555321
Q ss_pred Cc----CCHHHHHHHHHHHHhc----CCeEEEEcCCh
Q 009410 210 FM----INDELLIEGFKRCKSL----GALAMVHAENG 238 (535)
Q Consensus 210 ~~----~~~~~l~~~~~~a~~~----g~~v~~H~~~~ 238 (535)
.. .-.+.+++.++.|.++ ++++.+|+...
T Consensus 170 ~~~~~e~Q~~~F~~QL~LA~e~~~~~~lPv~IH~R~A 206 (401)
T 3e2v_A 170 HYSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSA 206 (401)
T ss_dssp TTSCHHHHHHHHHHHHHHTTSSHHHHTSCEEEEEESC
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhccCCCeEEEEecch
Confidence 11 1245688889999999 99999999543
No 98
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=97.37 E-value=0.00081 Score=64.71 Aligned_cols=128 Identities=9% Similarity=-0.094 Sum_probs=66.3
Q ss_pred cccccccccccc---CCCC--------chhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceee
Q 009410 107 GIDPHTHLAMEF---MGSE--------TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM 175 (535)
Q Consensus 107 lID~H~H~~~~~---~g~~--------~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (535)
.||+|.|++... .... ..-........+-..||+.++-...... ....+...+.......-+++..
T Consensus 5 ~iD~H~H~~~~~~~~~pw~~~~~~~~~~~~~~~~ll~~~~~~GV~~~V~v~~~~~---~~~n~~l~~la~~~p~~~g~vg 81 (303)
T 4do7_A 5 RIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAG---RDETAFLLELACDEARIAAVVG 81 (303)
T ss_dssp CEEEEECCBCCCGGGCTTCCTTCGGGSSCBCHHHHHHHHHHTTCCEEEEECCSSS---HHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEeCCEecccCCCCCCCCCCCccccccCCCCHHHHHHHHHhcCCcEEEEEccCCc---HHHHHHHHHHHHhCCCeEEEEE
Confidence 499999998641 0011 0112233455567899998875432211 1111222222222111111111
Q ss_pred eeecCChhhHHHHHHHHHHcCCCEEEEEeecCCCC--cCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 176 AITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF--MINDELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
.......+..++++++. ..|+.++++...+.... .+..+.+...++.+.++|+++.+|....
T Consensus 82 ~v~~~~~~~~~~L~~l~-~~gv~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~~ 145 (303)
T 4do7_A 82 WEDLRAPQLAERVAEWR-GTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFER 145 (303)
T ss_dssp CCCTTCTTHHHHHTTCC-SSCEEEEECCGGGSSCHHHHHHCHHHHHHHHHHHHTTCEEEECCCGG
T ss_pred EeCCCCchHHHHHHHHh-hcCceEEEecCcCCCCccccccCHHHHHHHHHHHHCCCeEEEecCHH
Confidence 11112223455666655 56777777654332111 2345678899999999999999998643
No 99
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=97.16 E-value=0.0085 Score=57.08 Aligned_cols=227 Identities=13% Similarity=0.034 Sum_probs=120.2
Q ss_pred HHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHHHHcCCCEEEEEe
Q 009410 129 SGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMVKEKGINSFKFFM 204 (535)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~ik~~~ 204 (535)
.....+-+.||+..+-....... ...+.+....+..+.. +....++.... .+..+++++ ..+.|+.++++..
T Consensus 51 ~~l~~md~~GV~~~V~~~~~~~~~~~~~N~~~~~~~~~~p~r---~~~~~~v~p~~~~~a~~eL~~-~~~~g~~Gi~~~~ 126 (291)
T 3irs_A 51 LMFEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDK---FHPVGSIEAATRKEAMAQMQE-ILDLGIRIVNLEP 126 (291)
T ss_dssp HHHHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTT---EEEEEECCCSSHHHHHHHHHH-HHHTTCCCEEECG
T ss_pred HHHHHHHHCCCCEEEEcCCCccccccccHHHHHHHHHHCCCc---EEEEEecCccCHHHHHHHHHH-HHhCCCeEEEEeC
Confidence 34455678999987754322110 1223333333333221 11122222222 456677777 5578999999875
Q ss_pred ecCC-CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhc-
Q 009410 205 AYKG-SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV- 282 (535)
Q Consensus 205 ~~~~-~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 282 (535)
.+.+ ...++.+.+..+++.|.++|+++.+|...... - .. .+ ..| .. ...+...+
T Consensus 127 ~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~~~~------------~-~~-~~--~~p-----~~---~~~v~~~~P 182 (291)
T 3irs_A 127 GVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGGNAG------------P-DI-TY--TNP-----EH---IDRVLGDFP 182 (291)
T ss_dssp GGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSSSCS------------S-SG-GG--GCH-----HH---HHHHHHHCT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCCCCC------------C-CC-cc--CCH-----HH---HHHHHHHCC
Confidence 5432 23356778999999999999999999964310 0 00 00 000 11 22333333
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhc-C-C
Q 009410 283 NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT-G-I 360 (535)
Q Consensus 283 ~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~-G-v 360 (535)
+.++++.|+..+...+.++.+.+. -++...+... . .. .| ....+.++++. | -
T Consensus 183 ~l~ivl~H~G~~~~~~~~~l~~~~-~nvy~~~Sg~---------~-------~~---~~------~~~~~~~~~~~~g~d 236 (291)
T 3irs_A 183 DLTVVSSHGNWPWVQEIIHVAFRR-PNLYLSPDMY---------L-------YN---LP------GHADFIQAANSFLAD 236 (291)
T ss_dssp TCCEEEEGGGTTCHHHHHHHHHHC-TTEEEECGGG---------G-------SS---ST------THHHHHHHHTTGGGG
T ss_pred CCEEEeecCCcccHHHHHHHHhHC-CCeEecHHHH---------h-------cc---CC------CHHHHHHHHHHhCcc
Confidence 678889998765443444443222 2343333210 0 00 00 01224444442 2 3
Q ss_pred eEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCCCCCc
Q 009410 361 LQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKG 431 (535)
Q Consensus 361 ~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~~~~G 431 (535)
++++|||+ |+... . ..+.. +...++|.++.-+..+.|++++|++..+-|
T Consensus 237 rllfgSD~-P~~~~----------------~----~~~~~-~~~l~l~~e~~~~i~~~NA~rl~~~~~~~~ 285 (291)
T 3irs_A 237 RMLFGTAY-PMCPL----------------K----EYTEW-FLTLPIKPDAMEKILHGNAERLLAQAGREG 285 (291)
T ss_dssp TBCCCCCB-TSSCH----------------H----HHHHH-HHTSSCCHHHHHHHHTHHHHHHHHHSCC--
T ss_pred eEEEecCC-CCCCH----------------H----HHHHH-HHHCCCCHHHHHHHHHHHHHHHhCcccccc
Confidence 48999995 33211 1 11222 223479999999999999999999966555
No 100
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=97.12 E-value=0.0019 Score=63.77 Aligned_cols=161 Identities=14% Similarity=0.115 Sum_probs=93.5
Q ss_pred CCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHH
Q 009410 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 275 (535)
++.++.+..+. ...++..+..+++.|++.|+++.+|+.......+ .+..+
T Consensus 181 ~VvG~dL~g~E---~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~---------------------------~i~~a 230 (380)
T 4gxw_A 181 EVAGIGIDYRE---NDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWR---------------------------NVETA 230 (380)
T ss_dssp TBCEEEEESCC---TTCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHH---------------------------HHHHH
T ss_pred CEEEEeecCCC---CCCCHHHHHHHHHHHHHcCCCeeeeccccCCchH---------------------------HHHHH
Confidence 44555553221 1234667889999999999999999965321111 12222
Q ss_pred HHHHHhcCCCEEEEEccCH-HHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHH
Q 009410 276 IRLAEFVNTPLYVVHVMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQA 354 (535)
Q Consensus 276 ~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~ 354 (535)
++ ..+.. .+.|.... +..++++.+++.++++..||+++... +.. |. ......-+++.
T Consensus 231 l~---~lga~-RIgHG~~~~~d~~L~~~l~~~~I~lEvCP~SN~~l-------------~~v----~~-~~~~~~HP~~~ 288 (380)
T 4gxw_A 231 VD---LLHVD-RVDHGYTIVDNPELCARYAERGIVFTVVPTNSYYL-------------RTL----PP-DQWAERHPMRK 288 (380)
T ss_dssp HH---TSCCS-EEEECGGGGGCHHHHHHHHHHTCEEEECTTCHHHH-------------HHS----CT-TTHHHHCGGGG
T ss_pred HH---HcCCc-ccccceeeccChHHHHHHHHhCceeEECCcchhhh-------------ccc----cc-ccccccChHHH
Confidence 22 11222 36666432 22277889999999999999864221 000 00 00000113778
Q ss_pred HHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 355 ALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 355 ~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
+++.|++++++||.... |. +.+...+..+.+..|++.++.. ..+.|+.+.-.++
T Consensus 289 l~~~Gv~vtinTDDp~~-----------f~-------t~Ls~Ey~~~~~~~gls~~dl~-~l~~nsi~~sF~~ 342 (380)
T 4gxw_A 289 MPGLGLKIHPNTDDPTL-----------HK-------VNPSEAWELMFSHFGFTIADLK-QFMLNGIDGAWVD 342 (380)
T ss_dssp TGGGTCEEEECCBSHHH-----------HT-------CCHHHHHHHHHHTSCCCHHHHH-HHHHHHHHHSSSC
T ss_pred HHHCCCeEEECCCCchh-----------hC-------CCHHHHHHHHHHHhCcCHHHHH-HHHHHHHHHHcCC
Confidence 89999999999995431 11 0122233344556789999964 5678887776653
No 101
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=96.86 E-value=0.066 Score=51.94 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
+..++++++. +.|..++++...+.+ ..++.+.+..+++.|.++|+++.+|...
T Consensus 128 ~a~~el~~~~-~~g~~Gv~l~~~~~~-~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 128 LACKEASRAV-AAGHLGIQIGNHLGD-KDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp HHHHHHHHHH-HHTCCCEEEESCBTT-BCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHHHH-HcCCeEEEECCCCCC-CCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 4677888887 789999988765544 3456788999999999999999999854
No 102
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=96.78 E-value=0.041 Score=53.44 Aligned_cols=54 Identities=22% Similarity=0.261 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
+..++++++.++.|..++++...+.+ ..++.+.+..+++.|.++|+++.+|...
T Consensus 124 ~a~~el~~~~~~~g~~Gv~l~~~~~~-~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 124 LAVKEMERCVKELGFPGVQIGTHVNE-WDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESEETT-EETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHHHHccCCeEEEECCcCCC-CCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 46677888775679999998766544 3346678999999999999999999854
No 103
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=96.76 E-value=0.00086 Score=70.79 Aligned_cols=101 Identities=11% Similarity=0.030 Sum_probs=63.2
Q ss_pred EEEccCHHH-HHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeC
Q 009410 288 VVHVMSMDA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (535)
Q Consensus 288 ~~H~~~~~~-~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgt 366 (535)
+.|+..... ..+++.+++.|+++..||+++. .....+.. -++..++++|++++|||
T Consensus 541 IgHGv~l~edp~Li~lla~~~I~vevCP~SN~-------------kl~~~~~~----------HPi~~ll~~Gv~VsLgT 597 (701)
T 2a3l_A 541 IAHGINLRKSPVLQYLYYLAQIGLAMSPLSNN-------------SLFLDYHR----------NPFPVFFLRGLNVSLST 597 (701)
T ss_dssp CSCCGGGGGCHHHHHHHHHHTCCEEECHHHHT-------------TTTCCSTT----------CSHHHHHHTTCCEEECC
T ss_pred EEEEeecccCHHHHHHHHHcCCcEEECccchh-------------hhccCchH----------hHHHHHHHCCCcEEEeC
Confidence 466655443 1458889999999999998732 11111111 12889999999999999
Q ss_pred CCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCCC
Q 009410 367 DHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 427 (535)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 427 (535)
|+.......+ ..+...+. .+....+++..++.++ |.|++++.+++
T Consensus 598 Ddp~~~~~t~-----------~dL~~Ey~----~aa~~~~ls~~dl~~l-a~Ns~~asfl~ 642 (701)
T 2a3l_A 598 DDPLQIHLTK-----------EPLVEEYS----IAASVWKLSACDLCEI-ARNSVYQSGFS 642 (701)
T ss_dssp BCHHHHCCSS-----------SHHHHHHH----HHHHHHTCCHHHHHHH-HHHHHHHSCCC
T ss_pred CCccccCCCC-----------cCHHHHHH----HHHHHcCCCHHHHHHH-HHHHHHHhCCC
Confidence 9654311100 00111222 2222336999997666 99999999985
No 104
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=96.36 E-value=0.037 Score=53.16 Aligned_cols=54 Identities=11% Similarity=0.105 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
...+++++..++.|..++++.....+ ..++...+..+++.+.++|+++.+|...
T Consensus 111 ~a~~el~r~~~~~G~~Gv~l~~~~~~-~~l~d~~~~p~~~~~~e~g~pv~iH~g~ 164 (312)
T 3ij6_A 111 SACKVISSIKDDENLVGAQIFTRHLG-KSIADKEFRPVLAQAAKLHVPLWMHPVF 164 (312)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESEETT-EETTSTTTHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHHHHhCCCceEeccCCCCC-CCCCCccHHHHHHHHHHcCCeEEEcCCC
Confidence 46778888775678899998765544 3456678999999999999999999854
No 105
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=96.17 E-value=0.12 Score=50.51 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
+...+++++.+++.|..++++...+.+ ..++...+..+.+.+.++|+++.+|....
T Consensus 141 ~~a~~El~r~~~~~G~~Gv~l~~~~~~-~~~~d~~~~p~~~~~~e~g~pV~iH~g~~ 196 (357)
T 3nur_A 141 EAAAREFERCINDLGFKGALIMGRAQD-GFLDQDKYDIIFKTAENLDVPIYLHPAPV 196 (357)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEESCBTT-BCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHHHHhhcCceEEEeCCCCCC-CCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence 346788888766789999998754333 34567789999999999999999999654
No 106
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=95.83 E-value=0.038 Score=56.32 Aligned_cols=108 Identities=16% Similarity=0.088 Sum_probs=67.2
Q ss_pred CHHHHHHHHHH--HHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEE
Q 009410 213 NDELLIEGFKR--CKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (535)
Q Consensus 213 ~~~~l~~~~~~--a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 290 (535)
+...+..+++. |++.|+++.+|+...... |. .+ ...+..++. .+.. .+.|
T Consensus 307 p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~----------g~---------~~----~~~i~~Al~----Lga~-RIgH 358 (508)
T 3lgd_A 307 SLHDYKEALMIPAKDGVKLPYFFHAGETDWQ----------GT---------SI----DRNILDALM----LNTT-RIGH 358 (508)
T ss_dssp CTGGGHHHHTHHHHTTCCCCBCCEECCSSCC----------SS---------TT----TTHHHHHHH----TTCS-SEEE
T ss_pred CHHHHHHHHHHHHHHHcCCceeeecccccCC----------CC---------Cc----HHHHHHHHh----cCCc-eeee
Confidence 45667777777 889999999999543210 00 00 011223332 2322 3678
Q ss_pred ccCHH-HHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCCcccHHHHHHHHhcCCeEEEeCCCC
Q 009410 291 VMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (535)
Q Consensus 291 ~~~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~Gv~~~lgtD~~ 369 (535)
+.... ..++++.+++.++++..||+++.....-. .+. ..++..++++|++++++||++
T Consensus 359 Gv~l~~dp~l~~~l~~~~I~levCP~SN~~l~~v~-----------~~~----------~hP~~~ll~~Gv~V~l~TDdp 417 (508)
T 3lgd_A 359 GFALSKHPAVRTYSWKKDIPIEVCPISNQVLKLVS-----------DLR----------NHPVATLMATGHPMVISSDDP 417 (508)
T ss_dssp CTTGGGCHHHHHHHHHTTCCEEECHHHHHHTTSCS-----------SGG----------GCTHHHHHHTTCCEEECCBSH
T ss_pred eEecCccHHHHHHHHhcCCeEEECcchHHHhCCCC-----------Ccc----------cChHHHHHHCCCcEEEcCCCc
Confidence 87654 12788999999999999998743211100 010 123899999999999999964
No 107
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=92.92 E-value=0.3 Score=45.32 Aligned_cols=37 Identities=27% Similarity=0.249 Sum_probs=27.8
Q ss_pred cccccccccccc-CCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 107 GIDPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 107 lID~H~H~~~~~-~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
+||.|+|+..+. .|..+.++....++.+.+.|++.+.
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~ 38 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTII 38 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Confidence 689999986431 2556666655568889999999997
No 108
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=92.07 E-value=1.7 Score=42.63 Aligned_cols=55 Identities=13% Similarity=0.203 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
...+++++..++.|..++++.....+ ..++...+..+++.+.++|+++.+|....
T Consensus 160 ~a~~EL~r~~~~~G~~Gv~l~~~~~g-~~l~d~~~~pi~~~~~e~g~pV~iH~g~~ 214 (373)
T 4inf_A 160 WSAREIHRGARELGFKGIQINSHTQG-RYLDEEFFDPIFRALVEVDQPLYIHPATS 214 (373)
T ss_dssp HHHHHHHHHHHTSCCCCEEECSCBTT-BCTTSGGGHHHHHHHHHHTCCEEECCCCC
T ss_pred HHHHHHHHHHhhcCceEEEECCCCCC-CCCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 35678888875569999998655443 34567789999999999999999998654
No 109
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=73.02 E-value=3.1 Score=38.01 Aligned_cols=39 Identities=21% Similarity=0.300 Sum_probs=29.0
Q ss_pred eccccccccccccc-CCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 105 PGGIDPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 105 PGlID~H~H~~~~~-~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
.|++|.|+|...+. .|..+.++.....+.+.+.|++.+.
T Consensus 3 ~~m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~ 42 (247)
T 2wje_A 3 MGMIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIV 42 (247)
T ss_dssp -CEEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEE
T ss_pred CCCEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Confidence 46899999995432 2555666666778899999999886
No 110
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=72.00 E-value=28 Score=36.10 Aligned_cols=33 Identities=24% Similarity=0.143 Sum_probs=24.6
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
++|.|+|...+ .|..+.++ ....+.+.|++.+.
T Consensus 328 ~~DlH~HT~~S-DG~~t~ee---mv~~A~~~Gl~~Ia 360 (578)
T 2w9m_A 328 RGMIHTHSTWS-DGGASIRE---MAEATLTLGHEFLG 360 (578)
T ss_dssp CEEEEECCTTT-TCSSCHHH---HHHHHHHTTCSEEE
T ss_pred ceEEEecCCcc-CCCCCHHH---HHHHHHHCCCeEEE
Confidence 48999998766 45555554 47788899998775
No 111
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=71.43 E-value=30 Score=31.21 Aligned_cols=102 Identities=13% Similarity=-0.093 Sum_probs=67.2
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCh
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPP 265 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 265 (535)
++..+.+++.|.+++-+.... -....+++.+.++.+.++++|+.+..+.....
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~-------------------------- 85 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFH-LPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM-------------------------- 85 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTT-SCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE--------------------------
T ss_pred HHHHHHHHHhCCCEEEEeccc-CCCCCCHHHHHHHHHHHHHcCCeEEEEecccc--------------------------
Confidence 333344448899999876431 12235788899999999999999876653211
Q ss_pred hhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEeccc
Q 009410 266 LLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPV 315 (535)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~ 315 (535)
...+.+.+.++.+...|.+....|.....-.+..+.+++.|+.+..++.
T Consensus 86 -~~~~~~~~~i~~A~~lGa~~v~~~p~~~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 86 -KSEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp -CSHHHHHHHHHHHHHHTCSEEEEEECGGGHHHHHHHHHHHTCEEEEECC
T ss_pred -CCHHHHHHHHHHHHHhCCCEEEecCCHHHHHHHHHHHHHcCCEEEEecC
Confidence 0124577788888999998887775432222444555677888876654
No 112
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=70.80 E-value=11 Score=36.29 Aligned_cols=57 Identities=23% Similarity=0.275 Sum_probs=44.0
Q ss_pred hhhHHHHHHHHHHcCCCEEEEEeecCC----CCcCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 182 EVVSDEMEVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
++..++++++.++.|..++++..++.+ ...+..+.+..+++.|.++|+++.+|....
T Consensus 122 ~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~~~ 182 (350)
T 2gwg_A 122 KTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVSTS 182 (350)
T ss_dssp GGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCCC-
T ss_pred HHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCCCC
Confidence 456788888886789999988655332 123567889999999999999999998654
No 113
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=66.38 E-value=29 Score=31.31 Aligned_cols=104 Identities=9% Similarity=0.047 Sum_probs=68.5
Q ss_pred HHHHHHHHHHcCCCEEEEEeecC------C---CCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYK------G---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~------~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (535)
.+.++. +++.|.+.+-++.... + ....+++.+.++.+.++++|+.+..|......
T Consensus 25 ~~~l~~-~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~--------------- 88 (262)
T 3p6l_A 25 TEALDK-TQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAE--------------- 88 (262)
T ss_dssp HHHHHH-HHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCS---------------
T ss_pred HHHHHH-HHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCc---------------
Confidence 344444 4488999998764321 1 23457888999999999999998877532110
Q ss_pred cccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcCCcEEecccc
Q 009410 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (535)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~ 316 (535)
..+.+.+.++.+...|.+....|.....-.+..+.+++.|+.+..++.+
T Consensus 89 ------------~~~~~~~~i~~A~~lGa~~v~~~~~~~~~~~l~~~a~~~gv~l~~En~~ 137 (262)
T 3p6l_A 89 ------------KSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHP 137 (262)
T ss_dssp ------------STTHHHHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEEEEECCS
T ss_pred ------------cHHHHHHHHHHHHHcCCCEEEecCCHHHHHHHHHHHHHhCCEEEEEeCC
Confidence 0134677888899999998888754322224455556779888777653
No 114
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=66.03 E-value=76 Score=28.59 Aligned_cols=112 Identities=12% Similarity=0.030 Sum_probs=68.8
Q ss_pred HHHHHHHHcCCCEEEEEeecCC---CCcCCHHHHHHHHHHHHhcCC-eEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009410 187 EMEVMVKEKGINSFKFFMAYKG---SFMINDELLIEGFKRCKSLGA-LAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~---~~~~~~~~l~~~~~~a~~~g~-~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
+..+.+.+.|.+++-++...+. ....+++.+.++.+.++++|+ .+.+|...... +.+ ..
T Consensus 18 ~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~------------l~s-----~~ 80 (270)
T 3aam_A 18 GAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVN------------LGA-----EG 80 (270)
T ss_dssp HHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCC------------TTC-----SS
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccC------------CCC-----CH
Confidence 3333444889999988654321 123467889999999999999 89999753200 000 00
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccCH------HHHHHHHHHH--HcCCcEEeccc
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM------DAMEEIAKAR--KAGQRVIGEPV 315 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~------~~~~~~~~~~--~~g~~v~~~~~ 315 (535)
.......+.+.+.++++...|.+....|.... +.+..+...+ +.|+.+..++.
T Consensus 81 ~~r~~~~~~~~~~i~~a~~lGa~~vv~h~g~~~~~~~~~~l~~l~~~a~~~~gv~l~lEn~ 141 (270)
T 3aam_A 81 ELWEKSVASLADDLEKAALLGVEYVVVHPGSGRPERVKEGALKALRLAGVRSRPVLLVENT 141 (270)
T ss_dssp THHHHHHHHHHHHHHHHHHHTCCEEEECCCBSCHHHHHHHHHHHHHHHTCCSSSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHhhcccCCCEEEEecC
Confidence 01122345678899999999999888886541 2222232233 46777777655
No 115
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=65.14 E-value=54 Score=29.57 Aligned_cols=106 Identities=13% Similarity=0.029 Sum_probs=59.8
Q ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeE-EEEcCChhhHHHHHHHHHHcCCCCcccccccCChh
Q 009410 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALA-MVHAENGDAVFEGQKRMIELGITGPEGHALSRPPL 266 (535)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v-~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 266 (535)
..+.+++.|.+++-+..........+...+.++.+.++++|+.+ .+|+...-. .+..
T Consensus 24 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~----------------------~~~~ 81 (272)
T 2q02_A 24 FFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFN----------------------QLTE 81 (272)
T ss_dssp HHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTT----------------------SCCH
T ss_pred HHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccC----------------------CcHH
Confidence 33334478999998764322111223355666777777889988 677532100 0111
Q ss_pred hHHHHHHHHHHHHHhcCCCEEEEEccC----------HHHHHH-HHHHHHcCCcEEeccc
Q 009410 267 LEGEATTRAIRLAEFVNTPLYVVHVMS----------MDAMEE-IAKARKAGQRVIGEPV 315 (535)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~H~~~----------~~~~~~-~~~~~~~g~~v~~~~~ 315 (535)
...+.+.+.++++...|.+....|... .+.+.. .+.+++.|+.+..++.
T Consensus 82 ~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~ 141 (272)
T 2q02_A 82 EVVKKTEGLLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPL 141 (272)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 123456788888888888877766542 222222 2333556777776654
No 116
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=57.97 E-value=1e+02 Score=28.74 Aligned_cols=120 Identities=14% Similarity=0.162 Sum_probs=70.1
Q ss_pred hHHHHHHHHHHcCCCEEEEEeec--CCCCcCC-HHHHHHHH---HHHHh-cCCeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009410 184 VSDEMEVMVKEKGINSFKFFMAY--KGSFMIN-DELLIEGF---KRCKS-LGALAMVHAENGDAVFEGQKRMIELGITGP 256 (535)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~--~~~~~~~-~~~l~~~~---~~a~~-~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (535)
..+..+++. +.|++.+.+.... +|....+ .+++++++ +..++ .+.++.+.......+...++. |..-+
T Consensus 65 a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~~~~V~~aAl~a----Ga~iI 139 (297)
T 1tx2_A 65 AVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEA----GAHII 139 (297)
T ss_dssp HHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECSCHHHHHHHHHH----TCCEE
T ss_pred HHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCCCHHHHHHHHHc----CCCEE
Confidence 444455555 7899999886432 2322333 56666666 55454 389999999887666655544 54332
Q ss_pred ccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccC------------HHHHHHHHHHHHcCCc---EEeccc
Q 009410 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------------MDAMEEIAKARKAGQR---VIGEPV 315 (535)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~------------~~~~~~~~~~~~~g~~---v~~~~~ 315 (535)
..-.... ...+.++++.+++.++++.|... ..-.+.++.+.+.|++ ++..|.
T Consensus 140 Ndvsg~~-------~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg 206 (297)
T 1tx2_A 140 NDIWGAK-------AEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPG 206 (297)
T ss_dssp EETTTTS-------SCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred EECCCCC-------CCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCC
Confidence 2111110 01245667778899999999631 1112455666777876 666554
No 117
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=56.57 E-value=1.1e+02 Score=29.49 Aligned_cols=23 Identities=4% Similarity=-0.050 Sum_probs=18.0
Q ss_pred CCCCHHH-----HHHHHhHHHHHHcCCC
Q 009410 405 GQISVTD-----YVRLTSTECARIFNVY 427 (535)
Q Consensus 405 ~~ls~~e-----al~~~T~~~A~~lgl~ 427 (535)
.+++.++ .-+....|+++++|++
T Consensus 344 ~~ls~~~~~~~~~~~I~~~NA~rlf~l~ 371 (376)
T 2qpx_A 344 LPFVDLAQKKAWINAICWQTSAKLYHQE 371 (376)
T ss_dssp CSSCCHHHHHHHHHHHHTHHHHHHTTCG
T ss_pred cCcchhhcCHHHHHHHHHHhHHHHhCCC
Confidence 3577666 7777889999999983
No 118
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=55.65 E-value=68 Score=29.62 Aligned_cols=97 Identities=13% Similarity=0.142 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHcCCCEEEEEeec--CCCCcCC-HHHHHHHHHHHHhc----CCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009410 183 VVSDEMEVMVKEKGINSFKFFMAY--KGSFMIN-DELLIEGFKRCKSL----GALAMVHAENGDAVFEGQKRMIELGITG 255 (535)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~--~~~~~~~-~~~l~~~~~~a~~~----g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (535)
...+..+++. +.|++.+.+.... +|....+ .+++++++...+.. +.+++++......+...++ .|..-
T Consensus 39 ~a~~~a~~~v-~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~~~va~aAl~----aGa~i 113 (282)
T 1aj0_A 39 DAVKHANLMI-NAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAK----VGAHI 113 (282)
T ss_dssp HHHHHHHHHH-HHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH----TTCCE
T ss_pred HHHHHHHHHH-HCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCCHHHHHHHHH----cCCCE
Confidence 3445555666 7899999886532 2222222 56665555544433 8999999988866655554 35543
Q ss_pred cccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
+..-... ...+.+.+..+++.++++.|..
T Consensus 114 INdvsg~--------~d~~~~~~~a~~~~~vVlmh~~ 142 (282)
T 1aj0_A 114 INDIRSL--------SEPGALEAAAETGLPVCLMHMQ 142 (282)
T ss_dssp EEETTTT--------CSTTHHHHHHHHTCCEEEECCS
T ss_pred EEECCCC--------CCHHHHHHHHHhCCeEEEEccC
Confidence 2211111 1234566778889999999973
No 119
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=51.65 E-value=1.5e+02 Score=27.47 Aligned_cols=120 Identities=14% Similarity=0.037 Sum_probs=67.2
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc----CCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL----GALAMVHAEN--GDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~----g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+. .+++.+++.. .....+..+.+.+.|.......
T Consensus 32 ~lv~~li-~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 110 (301)
T 3m5v_A 32 RLIKRQI-ENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSV 110 (301)
T ss_dssp HHHHHHH-HTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 3344444 7899887543333334667888877777776653 5899999854 4444555566777787654211
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHHc
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~ 306 (535)
........+..-....-.++...+.++.+.+..... ..+.+.++++.
T Consensus 111 ~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 161 (301)
T 3m5v_A 111 APYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRD 161 (301)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhc
Confidence 111111122222333334566678999988863221 12556666554
No 120
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=50.74 E-value=2e+02 Score=28.62 Aligned_cols=125 Identities=12% Similarity=0.064 Sum_probs=64.8
Q ss_pred HHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEeec
Q 009410 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (535)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (535)
......++.+|+..++-.....+. .....++.....+......+.+..+. ..+.+..-++.+.+.+.|++.+.+- +-
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~-~~~~e~~~~~a~~l~~~Gad~I~l~-DT 180 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSP-VHNLQTWVDVAQQLAELGVDSIALK-DM 180 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCT-TCCHHHHHHHHHHHHHTTCSEEEEE-ET
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCC-CCCHHHHHHHHHHHHHCCCCEEEEc-CC
Confidence 344667888999877633222221 34444444444433222222221111 1233333333333347899987653 33
Q ss_pred CCCCcCCHHHHHHHHHHHHh-cCCeEEEEcCChhh-HHHHHHHHHHcCCCCc
Q 009410 207 KGSFMINDELLIEGFKRCKS-LGALAMVHAENGDA-VFEGQKRMIELGITGP 256 (535)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~~ 256 (535)
.| ..++..+.+++...++ .++++.+|+.++.. .....-...+.|...+
T Consensus 181 ~G--~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~~V 230 (464)
T 2nx9_A 181 AG--ILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRV 230 (464)
T ss_dssp TS--CCCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCSEE
T ss_pred CC--CcCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHHhCCCEE
Confidence 33 2467888888777654 47899999866532 2223334455676543
No 121
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=49.29 E-value=85 Score=29.32 Aligned_cols=106 Identities=11% Similarity=0.036 Sum_probs=69.1
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh--cCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS--LGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~--~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (535)
+-+..+.+-+.+++.+...|--. +.........+.+..++..+.+ .++|+..|....... +.+...++.|+++.--
T Consensus 26 n~e~~~avi~AAee~~sPvIlq~-s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~-e~~~~ai~~GFtSVMi 103 (307)
T 3n9r_A 26 NFEMLNAIFEAGNEENSPLFIQA-SEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTF-ESCEKAVKAGFTSVMI 103 (307)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEE-EHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEECSH-HHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEc-ChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCH-HHHHHHHHhCCCcEEE
Confidence 34555666666656666665322 2111111245667777776655 689999998544332 4555667789988776
Q ss_pred ccccCChhhHHHHHHHHHHHHHhcCCCEEE
Q 009410 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (535)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (535)
.....|.........+.++++...|..+-.
T Consensus 104 DgS~~p~eeNi~~Tk~vv~~ah~~gvsVEa 133 (307)
T 3n9r_A 104 DASHHAFEENLELTSKVVKMAHNAGVSVEA 133 (307)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 666678877888889999999988876653
No 122
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=48.98 E-value=74 Score=28.99 Aligned_cols=121 Identities=16% Similarity=0.079 Sum_probs=72.1
Q ss_pred hHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc-CCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009410 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
..+...++. +.|++.+-+.... ......+++.+++...++. +.++++-..........++.+ .|..-+..
T Consensus 27 a~~~a~~~v-~~GAdiIDIg~g~--~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~--~Ga~iINd---- 97 (262)
T 1f6y_A 27 VQEWARRQE-EGGARALDLNVGP--AVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKC--KNRAMINS---- 97 (262)
T ss_dssp HHHHHHHHH-HHTCSEEEEBCC------CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHC--SSCEEEEE----
T ss_pred HHHHHHHHH-HCCCcEEEECCCC--CCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhC--CCCCEEEE----
Confidence 344455555 7899988775421 1223567788888877765 888888887776665555442 14321110
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccC---HH--------HHHHHHHHHHcCCc---EEeccc
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMS---MD--------AMEEIAKARKAGQR---VIGEPV 315 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~---~~--------~~~~~~~~~~~g~~---v~~~~~ 315 (535)
... ..+.+.+.+.++.+++.++++.|... +. ..+.++.+.+.|++ ++..|.
T Consensus 98 vs~--~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDPg 162 (262)
T 1f6y_A 98 TNA--EREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDPL 162 (262)
T ss_dssp ECS--CHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred CCC--CcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEeCC
Confidence 010 12445577888889999999999721 10 12455667778874 666554
No 123
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=45.27 E-value=1.9e+02 Score=26.81 Aligned_cols=119 Identities=12% Similarity=0.020 Sum_probs=66.3
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcC--ChhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+. .+++.+++. +.....+..+.+.+.|......-.
T Consensus 40 ~lv~~li-~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 40 RLANHLV-DQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHH-HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHH-HcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3334444 6899888554333344667888887777776653 578999984 344445555667777876542111
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
.......+..-....-.++...+.++.+.+..... ..+.+.++++
T Consensus 119 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 167 (304)
T 3l21_A 119 PYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALAS 167 (304)
T ss_dssp CCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 11111122222333334556668899988863211 1256666664
No 124
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=44.12 E-value=1.7e+02 Score=26.93 Aligned_cols=51 Identities=20% Similarity=0.266 Sum_probs=36.7
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
.++..++.++.|++.+-+..+ |++.+.++.+.|+++-+.. ++|++.|-.+.
T Consensus 161 Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v---~vpLVlHGgSG 216 (288)
T 3q94_A 161 PAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT---GVPLVLHGGTG 216 (288)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH---CSCEEECCCTT
T ss_pred HHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc---CCCEEEeCCCC
Confidence 455666676789998876554 3445678888888887655 79999997543
No 125
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=43.59 E-value=97 Score=28.63 Aligned_cols=106 Identities=7% Similarity=-0.041 Sum_probs=67.1
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHH-HHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDEL-LIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~-l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+-+..+.+-+.+++.+...|--. +.........+. ..-+...|++.++|+..|...... .+.+...++.|+++.--.
T Consensus 27 n~e~~~avl~AAe~~~sPvIlq~-s~~~~~y~g~~~~~~~v~~~a~~~~VPValHlDHg~~-~e~i~~ai~~GFtSVMiD 104 (286)
T 1gvf_A 27 NAETIQAILEVCSEMRSPVILAG-TPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHES-LDDIRRKVHAGVRSAMID 104 (286)
T ss_dssp SHHHHHHHHHHHHHHTCCCEEEE-CTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEECC-HHHHHHHHHTTCCEEEEC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEC-ChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEcCCCCC-HHHHHHHHHcCCCeEEEC
Confidence 34555666666656666655221 211111113333 344455667789999999854433 345566677899887766
Q ss_pred cccCChhhHHHHHHHHHHHHHhcCCCEEE
Q 009410 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (535)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (535)
....|.........+.++++...|..+-.
T Consensus 105 gS~lp~eeNi~~Tk~vv~~ah~~gvsVEa 133 (286)
T 1gvf_A 105 GSHFPFAENVKLVKSVVDFCHSQDCSVEA 133 (286)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 66778777778888999999988876543
No 126
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=43.04 E-value=1.6e+02 Score=27.20 Aligned_cols=107 Identities=16% Similarity=0.119 Sum_probs=68.8
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHH--hcCCeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFK-RCK--SLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~--~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (535)
+-+..+.+-+.+++.+...|--.......+....+.+..++. .|+ +.++|+..|...... .+.+...++.|+++.-
T Consensus 30 n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~-~e~i~~ai~~GFtSVM 108 (288)
T 3q94_A 30 NLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSS-FEKCKEAIDAGFTSVM 108 (288)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECS-HHHHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCC-HHHHHHHHHcCCCeEE
Confidence 345566666666666766653221111111124555555554 566 689999999854433 2345566778998877
Q ss_pred cccccCChhhHHHHHHHHHHHHHhcCCCEEE
Q 009410 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (535)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (535)
-.....|.........+.++++...|..+-.
T Consensus 109 iDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEa 139 (288)
T 3q94_A 109 IDASHHPFEENVETTKKVVEYAHARNVSVEA 139 (288)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 6666778887888889999999988876654
No 127
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=42.81 E-value=2e+02 Score=26.74 Aligned_cols=110 Identities=11% Similarity=-0.006 Sum_probs=59.1
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
+..+.+.+.......+.+||..+.-++..+.. +. .+.++...+... -+.+...+....+ .+..+..+. +
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~---grvpViaGvg~~st~~ai~la~~-A 103 (306)
T 1o5k_A 28 GELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVD---GKIPVIVGAGTNSTEKTLKLVKQ-A 103 (306)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEcCCCccHHHHHHHHHH-H
Confidence 44555666677777889999998755443332 22 222233322221 1223333333323 344443433 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++. |...++|+..+-
T Consensus 104 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 145 (306)
T 1o5k_A 104 EKLGANGVLVVTPYY--NKPTQEGLYQHYKYISERTDLGIVVYN 145 (306)
T ss_dssp HHHTCSEEEEECCCS--SCCCHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred HhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 478999987654332 23466666655544 555688988764
No 128
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=42.56 E-value=27 Score=30.77 Aligned_cols=57 Identities=4% Similarity=-0.171 Sum_probs=36.9
Q ss_pred HHHHHhcCCeEEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 352 ~~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
+....+.|+++.++||.... .+.. .... ...+....|++.++++.+.|.+|-+++..
T Consensus 153 l~l~k~~g~~ivisSDAh~~-~~v~----------------~~~~-~~~l~~~~G~~~e~~~~~l~~~~~~i~~~ 209 (212)
T 1v77_A 153 WKLVEKYKVRRFLTSSAQEK-WDVR----------------YPRD-LISLGVVIGMEIPQAKASISMYPEIILKR 209 (212)
T ss_dssp HHHHHHHTCCEEEECCCSSG-GGCC----------------CHHH-HHHHHHHTTCCHHHHHHTTTHHHHHHHC-
T ss_pred HHHHHhcCCCEEEeCCCCCh-hhcC----------------CHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 33345569999999995321 1110 1111 11344466899999999999999988764
No 129
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=42.38 E-value=1.9e+02 Score=26.05 Aligned_cols=89 Identities=10% Similarity=0.061 Sum_probs=54.9
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh-----hhHHHHHHHHHHcCCCCcccccccCChhh
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-----DAVFEGQKRMIELGITGPEGHALSRPPLL 267 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 267 (535)
++.|.+++-+..... ...+.+.+.++.+.++++|+.+..+.... ....... ...+... ......
T Consensus 31 ~~~G~~~vEl~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~---~~~~~~~------~~~r~~ 99 (290)
T 3tva_A 31 QDLKVPTVQVHAPHP--HTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTA---RTVGLVP------LETRAS 99 (290)
T ss_dssp HHTTCSEEEEECCCG--GGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHH---HHSSSCS------TTTHHH
T ss_pred HHcCCCEEEecCCCC--CcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccc---cccCCCC------HHHHHH
Confidence 378999998875322 23578889999999999999998874311 0000000 0001100 011123
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 268 EGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
..+.+.+.++++...|.+....|..
T Consensus 100 ~~~~~~~~i~~a~~lG~~~v~~~~G 124 (290)
T 3tva_A 100 RVAEMKEISDFASWVGCPAIGLHIG 124 (290)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 3466888999999999998887753
No 130
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=42.30 E-value=2.2e+02 Score=26.60 Aligned_cols=110 Identities=9% Similarity=0.093 Sum_probs=59.4
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecC-ChhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKW-DEVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 192 (535)
+..+.+.+.......+.+||..++-++..+.. +. .+.++...+.... +.....+.... ..+..+..+. +
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g---rvpViaGvg~~~t~~ai~la~~-A 115 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAH---RVPTIVSVSDLTTAKTVRRAQF-A 115 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCCCHHHHHHHHHH-H
Confidence 45566777777788899999998865443332 22 2223333322211 22233333322 2344444444 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHH-HHHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (535)
++.|++.+-+..-+. ...+.+.+.+-+ +.|...++|+..+-
T Consensus 116 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 157 (315)
T 3na8_A 116 ESLGAEAVMVLPISY--WKLNEAEVFQHYRAVGEAIGVPVMLYN 157 (315)
T ss_dssp HHTTCSEEEECCCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 478999987644332 234555555444 44455688988764
No 131
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=42.26 E-value=2.1e+02 Score=26.41 Aligned_cols=110 Identities=13% Similarity=0.013 Sum_probs=60.6
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChH---HHHHHHHHHhcccccccceeeeeecC-ChhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKW-DEVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..+.-++..+.. +.. +.++...+... -+.....+.... ..+..+..+. +
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~-a 98 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA---KRVPVIAGTGANNTVEAIALSQA-A 98 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHH-H
Confidence 55667777777888899999998866544432 222 22333322221 122333333332 3344444444 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++.+-+..-+. ...+.+.+.+.++ .|...++|+..+-
T Consensus 99 ~~~Gadavlv~~P~y--~~~~~~~l~~~f~~va~a~~lPiilYn 140 (297)
T 3flu_A 99 EKAGADYTLSVVPYY--NKPSQEGIYQHFKTIAEATSIPMIIYN 140 (297)
T ss_dssp HHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred HHcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 478999987654332 2345555555443 4556689988774
No 132
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=41.88 E-value=1.9e+02 Score=27.57 Aligned_cols=122 Identities=15% Similarity=0.054 Sum_probs=68.5
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEee-------c-CCCC----------------cCCHHHHHHHHHHHHhcCCeEEEEcC
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMA-------Y-KGSF----------------MINDELLIEGFKRCKSLGALAMVHAE 236 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~-------~-~~~~----------------~~~~~~l~~~~~~a~~~g~~v~~H~~ 236 (535)
+.+...++.+.+++.|++.+|+..- . .+.+ .++.+.++.+.+.+++.|+++..-+-
T Consensus 33 s~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~~ 112 (349)
T 2wqp_A 33 SLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTLF 112 (349)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEeeC
Confidence 3345555556666889999987521 0 1001 35789999999999999999998877
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc-cCHHHHH-HHHHHHHcCCcEEec
Q 009410 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV-MSMDAME-EIAKARKAGQRVIGE 313 (535)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~-~~~~~~~~g~~v~~~ 313 (535)
+...++.. .+.+.....-- ... ..-..+++.....+.|+++.-. ++.+++. .++.+...|..++.+
T Consensus 113 d~~svd~l----~~~~v~~~KI~---S~~----~~n~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 113 SRAAALRL----QRMDIPAYKIG---SGE----CNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp SHHHHHHH----HHHTCSCEEEC---GGG----TTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHH----HhcCCCEEEEC---ccc----ccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 66544333 33343221100 000 1112345555567888877544 3333322 234445566566664
No 133
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=41.34 E-value=2.1e+02 Score=26.24 Aligned_cols=110 Identities=10% Similarity=0.023 Sum_probs=59.6
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChH---HHHHHHHHHhcccccccceeeeeecC-ChhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKW-DEVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..+.-++..+.. +.. +.++...+... -+.....+.... ..+..+..+. +
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~-a 92 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVAN---KRIPIIAGTGANSTREAIELTKA-A 92 (291)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhC---CCCeEEEeCCCCCHHHHHHHHHH-H
Confidence 45666777777778889999988866544432 222 22232222221 122333333332 3344444433 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++.+-+..-+. ...+.+.+.+.++ .|...++|+..+-
T Consensus 93 ~~~Gadavlv~~P~y--~~~~~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3tak_A 93 KDLGADAALLVTPYY--NKPTQEGLYQHYKAIAEAVELPLILYN 134 (291)
T ss_dssp HHHTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred HhcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 478999987654332 2345555554443 4555689988774
No 134
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=41.22 E-value=2.3e+02 Score=26.49 Aligned_cols=110 Identities=9% Similarity=-0.006 Sum_probs=59.7
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChH---HHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..++-++..+.. +.. +.++...+... -+.....+....+ .+..+..+. +
T Consensus 38 g~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg~~st~~ai~la~~-A 113 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVA---KRVPVVAGAGSNSTSEAVELAKH-A 113 (315)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHH-H
Confidence 45566777777788899999998866544433 222 22232222221 1223333333323 344444433 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++ .|...++|+..+-
T Consensus 114 ~~~Gadavlv~~P~y--~~~~~~~l~~~f~~va~a~~lPiilYn 155 (315)
T 3si9_A 114 EKAGADAVLVVTPYY--NRPNQRGLYTHFSSIAKAISIPIIIYN 155 (315)
T ss_dssp HHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHcCCCCEEEEe
Confidence 478999987654332 2345555554443 4455689988774
No 135
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=41.11 E-value=2.2e+02 Score=26.37 Aligned_cols=110 Identities=8% Similarity=-0.072 Sum_probs=60.4
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChH---HHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..++-++..+.. +.. +.++...+... -+.....+....+ .+..+..+. +
T Consensus 31 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~-a 106 (304)
T 3l21_A 31 GSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG---DRARVIAGAGTYDTAHSIRLAKA-C 106 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEECCCSCHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEeCCCCCHHHHHHHHHH-H
Confidence 45667777777888899999988866544432 222 22232222221 1223333333222 344444434 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+.++ .|...++|+..+-
T Consensus 107 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 148 (304)
T 3l21_A 107 AAEGAHGLLVVTPYY--SKPPQRGLQAHFTAVADATELPMLLYD 148 (304)
T ss_dssp HHHTCSEEEEECCCS--SCCCHHHHHHHHHHHHTSCSSCEEEEE
T ss_pred HHcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 478999987654332 2346666655554 4455689988774
No 136
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=40.97 E-value=15 Score=33.61 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=25.1
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
++|.|+|...+..|..+++++ .+.+.+.|++.+.
T Consensus 1 ~~DlH~Ht~~S~DG~~~~ee~---v~~A~~~Gl~~ia 34 (267)
T 2yxo_A 1 MVDSHVHTPLCGHAEGHPEAY---LEEARAKGLKGVV 34 (267)
T ss_dssp CEEEEECCGGGSSCCSCHHHH---HHHHHHTTCSEEE
T ss_pred CCccCcCcCCCCCCCCCHHHH---HHHHHHcCCCEEE
Confidence 589999987654455555544 7888999998775
No 137
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=40.36 E-value=90 Score=29.11 Aligned_cols=104 Identities=10% Similarity=-0.034 Sum_probs=63.0
Q ss_pred hhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHc--------CC
Q 009410 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIEL--------GI 253 (535)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~--------g~ 253 (535)
-+..+.+-+.+++.+...|--+ +...........+..+...|++.++||..|....... +.+...++. |+
T Consensus 37 ~e~~~Avl~AAee~~sPvIlq~-s~g~~~y~g~~~~~~~~~~A~~~~VPVaLHlDHg~~~-e~i~~ai~~~~~~~~~~GF 114 (306)
T 3pm6_A 37 LEGILAIIRAAEHKRSPAMILL-FPWAIQYADSLLVRTAASACRAASVPITLHLDHAQDP-EIIKRAADLSRSETHEPGF 114 (306)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE-CHHHHHHHTTHHHHHHHHHHHHCSSCEEEEEEEECCH-HHHHHHHHTC------CCC
T ss_pred HHHHHHHHHHHHHhCCCEEEEc-ChhHHhhccHHHHHHHHHHHHHCCCCEEEEcCCCCCH-HHHHHHHHhhhhccCCCCC
Confidence 3445555555555566554221 1100001122445666778888999999998444332 334555566 77
Q ss_pred CCcccccccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
++.--.....|.........+.++++...|..+-
T Consensus 115 tSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVE 148 (306)
T 3pm6_A 115 DSIMVDMSHFSKEENLRLTRELVAYCNARGIATE 148 (306)
T ss_dssp SEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 7766556667777777888899999887776554
No 138
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=40.09 E-value=1.2e+02 Score=28.29 Aligned_cols=106 Identities=13% Similarity=0.061 Sum_probs=67.8
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+-+..+.+-+.+++.+...|--. +.........+.+..++..+.+.++|+..|...... .+.+...++.|+++.--..
T Consensus 26 n~e~~~Ail~AAee~~sPvIlq~-s~g~~~y~g~~~~~~~v~~~a~~~VPValHlDHg~~-~e~~~~ai~~GFtSVMiDg 103 (305)
T 1rvg_A 26 NMEFLQAVLEAAEEQRSPVILAL-SEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSS-YESVLRALRAGFTSVMIDK 103 (305)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEE-EHHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEECS-HHHHHHHHHTTCSEEEECC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEC-ChhHHhhCCHHHHHHHHHHHHhCCCcEEEECCCCCC-HHHHHHHHHcCCCeeeeCC
Confidence 34556666666656666665322 111101113455666666655699999999855433 2455566788998876666
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCCCEEE
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (535)
...|.........+.++++...|..+-.
T Consensus 104 S~~p~eENi~~Tk~vv~~ah~~gvsVEa 131 (305)
T 1rvg_A 104 SHEDFETNVRETRRVVEAAHAVGVTVEA 131 (305)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 6678777778888999999988766543
No 139
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=39.76 E-value=2.1e+02 Score=26.31 Aligned_cols=51 Identities=18% Similarity=0.233 Sum_probs=36.3
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
.++..++.++.|.+.+-+..+ |.+.+.++.+.|+++-+. .+++++.|-.+.
T Consensus 157 Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~---~~vpLVlHGgSG 212 (286)
T 1gvf_A 157 PQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREV---VDVPLVLHGASD 212 (286)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHH---CCSCEEECCCTT
T ss_pred HHHHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHh---cCCCEEEECCCC
Confidence 456666676789998876544 344567888888887665 479999997543
No 140
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=39.69 E-value=2.3e+02 Score=26.17 Aligned_cols=110 Identities=9% Similarity=-0.003 Sum_probs=60.8
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChH---HHHHHHHHHhcccccccceeeeeec-CChhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..++-++..+.. +.. +.++...+... -+.....+... ...+..+..+. +
T Consensus 20 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~-a 95 (300)
T 3eb2_A 20 GRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQ---RRVPVVAGVASTSVADAVAQAKL-Y 95 (300)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCBEEEEEESSHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHH-H
Confidence 45666777777788889999988755443332 222 22333222221 12223333333 33444444444 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++ .|...++|+..+-
T Consensus 96 ~~~Gadavlv~~P~y--~~~~~~~l~~~f~~va~a~~lPiilYn 137 (300)
T 3eb2_A 96 EKLGADGILAILEAY--FPLKDAQIESYFRAIADAVEIPVVIYT 137 (300)
T ss_dssp HHHTCSEEEEEECCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HHcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 478999987654433 2346666655554 4556689988774
No 141
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=39.45 E-value=2.3e+02 Score=26.00 Aligned_cols=98 Identities=13% Similarity=0.019 Sum_probs=55.0
Q ss_pred hhhHHHHHHHHHHcCCCEEEEEeec--CCCC-cCCHHHHHHHHHHHHhc---CCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009410 182 EVVSDEMEVMVKEKGINSFKFFMAY--KGSF-MINDELLIEGFKRCKSL---GALAMVHAENGDAVFEGQKRMIELGITG 255 (535)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~--~~~~-~~~~~~l~~~~~~a~~~---g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (535)
+...+..+++. +.|++.+.+.... +|.. ....+++++++...+.. +.+++++......+...++ .|..-
T Consensus 29 ~~a~~~a~~~v-~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~~~~va~aAl~----aGa~i 103 (280)
T 1eye_A 29 DDAVKHGLAMA-AAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRADVARAALQ----NGAQM 103 (280)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH----TTCCE
T ss_pred HHHHHHHHHHH-HCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCCCHHHHHHHHH----cCCCE
Confidence 34555566666 7899999886422 1211 22356666655555543 9999999988866655554 36533
Q ss_pred cccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
+..-.... ...+.+.+..+++.++++.|.
T Consensus 104 INdvsg~~-------~d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 104 VNDVSGGR-------ADPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp EEETTTTS-------SCTTHHHHHHHHTCCEEEECC
T ss_pred EEECCCCC-------CCHHHHHHHHHhCCeEEEEcC
Confidence 22111110 012456677888999999997
No 142
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=39.07 E-value=2.4e+02 Score=26.24 Aligned_cols=110 Identities=11% Similarity=0.029 Sum_probs=59.3
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecC-ChhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKW-DEVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..++-++..+.. +. .+.++...+... -+.....+.... ..+..+..+. +
T Consensus 39 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg~~st~eai~la~~-A 114 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVK---GRIPVIAGTGANSTREAVALTEA-A 114 (314)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHH-H
Confidence 45566677777777889999988765443332 22 222333322221 122333333332 3344444444 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHH-HHHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (535)
++.|++.+-+..-+. ...+.+.+.+-+ +.|...++|+..+-
T Consensus 115 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 156 (314)
T 3qze_A 115 KSGGADACLLVTPYY--NKPTQEGMYQHFRHIAEAVAIPQILYN 156 (314)
T ss_dssp HHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHSCSCEEEEE
T ss_pred HHcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 478999987654332 234555555444 34555689988774
No 143
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=38.41 E-value=2.3e+02 Score=25.79 Aligned_cols=122 Identities=15% Similarity=0.058 Sum_probs=72.6
Q ss_pred hhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc-CCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009410 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
...+..+++. +.|++.+-+..... ..-..+.+..+++..++. +.++.+-......+...++.+ .|..-+..
T Consensus 35 ~a~~~a~~~v-~~GAdiIDIg~~s~--~~eE~~rv~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~--~Ga~iINd--- 106 (271)
T 2yci_X 35 PIQEWARRQA-EKGAHYLDVNTGPT--ADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVH--RGHAMINS--- 106 (271)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECCSC--SSCHHHHHHHHHHHHHHHCCCCEEEECSCHHHHHHHHHHC--CSCCEEEE---
T ss_pred HHHHHHHHHH-HCCCCEEEEcCCcC--chhHHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhC--CCCCEEEE---
Confidence 3445555555 78999988754321 112356666777776654 899998888776666555543 14322111
Q ss_pred cCChhhHHHHHHHHHHHHHhcCCCEEEEEccC------H-----HHHHHHHHHHHcCCc---EEeccc
Q 009410 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------M-----DAMEEIAKARKAGQR---VIGEPV 315 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~------~-----~~~~~~~~~~~~g~~---v~~~~~ 315 (535)
... ..+.+.+.+.++..++.++++.|... . ...+.++.+.+.|++ ++..|.
T Consensus 107 -vs~--~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg 171 (271)
T 2yci_X 107 -TSA--DQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPL 171 (271)
T ss_dssp -ECS--CHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred -CCC--CccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecC
Confidence 011 11334677888888999999999731 1 112455566777876 666555
No 144
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=38.23 E-value=2.4e+02 Score=26.01 Aligned_cols=111 Identities=11% Similarity=0.048 Sum_probs=60.4
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChH---HHHHHHHHHhcccccccceeeeeecC-ChhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKW-DEVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..+.-.+..+.. +.. +.++...+.... .+.....+.... ..+..+..+. +
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--~rvpviaGvg~~~t~~ai~la~~-a 99 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKG--TKVKVLAGAGSNATHEAVGLAKF-A 99 (301)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEEECCCSSHHHHHHHHHH-H
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCCeEEEeCCCCCHHHHHHHHHH-H
Confidence 45566677777788899999998866544432 222 222222222211 022333333332 3344444434 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++.+-+..-+. ...+.+.+.+-++ .|...++|+..+-
T Consensus 100 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 141 (301)
T 3m5v_A 100 KEHGADGILSVAPYY--NKPTQQGLYEHYKAIAQSVDIPVLLYN 141 (301)
T ss_dssp HHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HHcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 478999987654333 2345555555444 4556689988764
No 145
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=38.03 E-value=1.8e+02 Score=26.57 Aligned_cols=87 Identities=18% Similarity=0.134 Sum_probs=54.7
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCC---CcCCHHHHHHHHHHHHhcCC-eEEEEcCChhhHHHHHHHHHHcCCCCccccc
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSLGA-LAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~a~~~g~-~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
.+.+... ++.|.+.+-++...+.. ...+.+.+.++.+.++++|+ .+.+|..... .+.
T Consensus 21 ~~~l~~~-~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~------------nl~------ 81 (303)
T 3aal_A 21 LAASEEA-ASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYII------------NIG------ 81 (303)
T ss_dssp HHHHHHH-HHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECCTTC------------CTT------
T ss_pred HHHHHHH-HHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEeccccc------------cCC------
Confidence 3444444 48899999886543221 12345667788888889999 7899974210 000
Q ss_pred ccCCh-----hhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 261 LSRPP-----LLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 261 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
.+. ....+.+.+.++++...|.+....|..
T Consensus 82 --s~d~~~~r~~~~~~~~~~i~~A~~lGa~~vv~h~g 116 (303)
T 3aal_A 82 --NTTNLDTFSLGVDFLRAEIERTEAIGAKQLVLHPG 116 (303)
T ss_dssp --CSSCHHHHHHHHHHHHHHHHHHHHHTCSEEEECCE
T ss_pred --CCCcHHHHHHHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 111 112355778889999999998877754
No 146
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=37.90 E-value=2.5e+02 Score=26.06 Aligned_cols=112 Identities=9% Similarity=0.080 Sum_probs=60.6
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecC-ChhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKW-DEVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..++-.+..+.. +. .+.++...+... -+.+...+.... ..+..+.. +.+
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la-~~A 99 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVA---GRVPVIVTTSHYSTQVCAARS-LRA 99 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHH-HHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEecCCchHHHHHHHH-HHH
Confidence 45667777777888889999988765443332 22 222333222221 122333333332 33444434 344
Q ss_pred HHcCCCEEEEEeecCCC-CcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGS-FMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~-~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++++-+..-|... ...+.+.+.+-++ .|...++|+..+-
T Consensus 100 ~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn 144 (309)
T 3fkr_A 100 QQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQD 144 (309)
T ss_dssp HHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 47899998765433221 2346666655544 4555689988764
No 147
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=37.75 E-value=2.2e+02 Score=25.45 Aligned_cols=86 Identities=16% Similarity=0.104 Sum_probs=55.2
Q ss_pred HHHHHHHHHcCCCEEEEEeecCC---CCcCCHHHHHHHHHHHHhcCCe---EEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKG---SFMINDELLIEGFKRCKSLGAL---AMVHAENGDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~---v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+.++.. ++.|.+++-++..... ....+.+.+.++.+.++++|+. +.+|..... .+.
T Consensus 16 ~~l~~~-~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~~------------~~~----- 77 (287)
T 2x7v_A 16 RVPQDT-VNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCHSGYLI------------NLA----- 77 (287)
T ss_dssp GHHHHH-HHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEECCTTC------------CTT-----
T ss_pred HHHHHH-HHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEEeccccc------------ccC-----
Confidence 334444 3789999988643221 1234678899999999999998 788864210 000
Q ss_pred cccCCh----hhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 260 ALSRPP----LLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 260 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
.+. ....+.+.+.++++...|.+....|..
T Consensus 78 ---~~~~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~g 111 (287)
T 2x7v_A 78 ---SPKDDIWQKSVELLKKEVEICRKLGIRYLNIHPG 111 (287)
T ss_dssp ---CSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCE
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 010 112355778889999999988777743
No 148
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=37.53 E-value=17 Score=32.57 Aligned_cols=34 Identities=24% Similarity=0.224 Sum_probs=23.9
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
++|.|+|...+..+..++++ ..+.+.+.|++.+.
T Consensus 3 ~~DlH~Ht~~Sd~g~~~~~e---~v~~A~~~Gl~~ia 36 (245)
T 1m65_A 3 PVDLHMHTVASTHAYSTLSD---YIAQAKQKGIKLFA 36 (245)
T ss_dssp CEECCBCCTTSTTCCCCHHH---HHHHHHHHTCCEEE
T ss_pred ceEeCcCCCCCCCCCCcHHH---HHHHHHHCCCCEEE
Confidence 68999998766333334544 47778888998765
No 149
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=37.34 E-value=2.5e+02 Score=25.83 Aligned_cols=120 Identities=9% Similarity=-0.006 Sum_probs=66.7
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+ ..+++.+++. +.....+..+.+.+.|......-.
T Consensus 27 ~lv~~li-~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 27 AHVNFLL-ENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLIT 105 (292)
T ss_dssp HHHHHHH-HTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHH-HcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECC
Confidence 3344444 789998865444444566788887777776654 3578999984 344444555667777876542111
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHHc
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~ 306 (535)
.......+..-+...-.++...+.++.+.+..... ..+.+.++++.
T Consensus 106 P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 155 (292)
T 3daq_A 106 PYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQH 155 (292)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC
Confidence 11111112222233333455568999988864211 12566666653
No 150
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=37.28 E-value=2.8e+02 Score=26.46 Aligned_cols=108 Identities=11% Similarity=-0.054 Sum_probs=58.7
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHH---HHHHHHHHhcccccccceeeeeecC-ChhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKAKNSCMDYGFHMAITKW-DEVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..++-.+..+.. +..+ .++...+... -+.....+.... ..+..+..+. +
T Consensus 75 g~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg~~st~eai~la~~-A 150 (360)
T 4dpp_A 75 GRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG---GSIKVIGNTGSNSTREAIHATEQ-G 150 (360)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEECCCSSHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhC---CCCeEEEecCCCCHHHHHHHHHH-H
Confidence 45667777777788899999998866544432 2222 2222222221 112222233322 2344443333 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEE
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (535)
++.|++++-+..-|. ...+.+.+.+-++...+. .|+...
T Consensus 151 ~~~Gadavlvv~PyY--~k~sq~gl~~hf~~IA~a-~PiilY 189 (360)
T 4dpp_A 151 FAVGMHAALHINPYY--GKTSIEGLIAHFQSVLHM-GPTIIY 189 (360)
T ss_dssp HHTTCSEEEEECCCS--SCCCHHHHHHHHHTTGGG-SCEEEE
T ss_pred HHcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHh-CCEEEE
Confidence 478999987654333 334677776666655444 577665
No 151
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=36.92 E-value=2.5e+02 Score=25.74 Aligned_cols=110 Identities=11% Similarity=0.020 Sum_probs=59.7
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChH---HHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
+..+.+.+.......+.+||..+.-++..+.. +.. +.++...+.... +.+...+....+ .+..+.. +.+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la-~~a 91 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG---RVQVIAGAGSNCTEEAIELS-VFA 91 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT---SSEEEEECCCSSHHHHHHHH-HHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCCCHHHHHHHH-HHH
Confidence 44566667777778899999998765444332 222 222222222211 223333333323 3344433 334
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++. |...++|+..+-
T Consensus 92 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (289)
T 2yxg_A 92 EDVGADAVLSITPYY--NKPTQEGLRKHFGKVAESINLPIVLYN 133 (289)
T ss_dssp HHHTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 478999987654332 23466666655543 556688988764
No 152
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=36.76 E-value=2.6e+02 Score=25.82 Aligned_cols=110 Identities=9% Similarity=-0.008 Sum_probs=59.0
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
+..+.+.+.......+.+||..++-++..+.. +. .+.++...+.... +.....+....+ .+..+..+ .+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~-~A 91 (297)
T 2rfg_A 16 GQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG---RVPVIAGAGSNNPVEAVRYAQ-HA 91 (297)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHH-HH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC---CCeEEEccCCCCHHHHHHHHH-HH
Confidence 34556666677777889999998855443332 22 2222333322211 223333333323 34444343 34
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++ .|...++|+..+-
T Consensus 92 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 133 (297)
T 2rfg_A 92 QQAGADAVLCVAGYY--NRPSQEGLYQHFKMVHDAIDIPIIVYN 133 (297)
T ss_dssp HHHTCSEEEECCCTT--TCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HhcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 478999987653332 2346666665554 3556688988764
No 153
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=36.68 E-value=2.6e+02 Score=25.80 Aligned_cols=118 Identities=8% Similarity=-0.025 Sum_probs=65.8
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc
Q 009410 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
.++.+. +.|++++-+..+......++.++-.++++.+.+ ...++.+|+.. .....+..+.+.+.|......-..
T Consensus 33 lv~~li-~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 33 LIDWHI-ENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp HHHHHH-HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHH-HcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 333444 789988865444344466788888777776654 35789999843 444445556677778765421111
Q ss_pred cCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
......+..-+...-.++...+.++.+.+..... ..+.+.++++
T Consensus 112 ~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 159 (297)
T 3flu_A 112 YYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAE 159 (297)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHc
Confidence 1111112222333334566668999988863211 1255666653
No 154
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=36.58 E-value=2e+02 Score=24.65 Aligned_cols=79 Identities=16% Similarity=0.088 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHHHHhcCCC-EEEEEccCHHHHHHHHHHHHcCCcEEeccccceEeeCcccccCcCccccceeEEcCCCCC
Q 009410 267 LEGEATTRAIRLAEFVNTP-LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA 345 (535)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~-~~~~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 345 (535)
...+.+..+.+.+.+.+.+ +.+...+...+...++.+ .|+.+++.+... .|.. |...
T Consensus 27 NT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~------------GF~~--------pg~~ 84 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMA--EGLEVVVVTYHT------------GFVR--------EGEN 84 (201)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHC--TTCEEEEEECCT------------TSSS--------TTCC
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHh--cCCeEEEEeCcC------------CCCC--------CCCC
Confidence 3445677777788888866 444555554543444433 566776554431 1111 2222
Q ss_pred cccHHHHHHHHhcCCeEEEeCC
Q 009410 346 SGHNKALQAALATGILQLVGTD 367 (535)
Q Consensus 346 ~~~~~~~~~~l~~Gv~~~lgtD 367 (535)
....+...++.+.|+++..+|.
T Consensus 85 e~~~e~~~~L~~~G~~V~t~tH 106 (201)
T 1vp8_A 85 TMPPEVEEELRKRGAKIVRQSH 106 (201)
T ss_dssp SSCHHHHHHHHHTTCEEEECCC
T ss_pred cCCHHHHHHHHhCCCEEEEEec
Confidence 3334667788889999999996
No 155
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=36.57 E-value=2.7e+02 Score=28.49 Aligned_cols=121 Identities=15% Similarity=0.069 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc-CCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009410 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
..+..+++. +.|++.+.+-++. ......+.+.+++...++. ++++.+-......+...++.+ .|..-+..
T Consensus 342 a~~~A~~~v-~~GAdiIDIgpg~--~~v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~~~--~G~~iINd---- 412 (566)
T 1q7z_A 342 VIKEAKTQV-EKGAEVLDVNFGI--ESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAY--PGRSLFNS---- 412 (566)
T ss_dssp HHHHHHHHH-HTTCSEEEEECSS--GGGSCHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHHHC--SSCCEEEE----
T ss_pred HHHHHHHHH-HCCCCEEEECCCC--CCCCHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHhc--CCCCEEEE----
Confidence 344444555 7899999886321 2234578888888777654 899999888777666666543 14322111
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccC----------HHHHHHHHHHHHcCCc--EEeccc
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMS----------MDAMEEIAKARKAGQR--VIGEPV 315 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~----------~~~~~~~~~~~~~g~~--v~~~~~ 315 (535)
.. ...+.+.+.+.+..+++.++++.|... ....+.++.+.+.|++ ++..|.
T Consensus 413 is--~~~~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~~Gi~~~IilDPg 475 (566)
T 1q7z_A 413 AK--VDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDFSDRVIFDPG 475 (566)
T ss_dssp EE--SCHHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHTTCGGGEEEECC
T ss_pred CC--cchhhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHHCCCCCcEEEeCC
Confidence 00 111335677888889999999999864 1122456667778875 665554
No 156
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=36.43 E-value=2.7e+02 Score=26.08 Aligned_cols=42 Identities=10% Similarity=-0.027 Sum_probs=32.9
Q ss_pred ChhhHHHHHHHHHHHHHh-cCCCEEEEEccCHHHHHHHHHHHHcC
Q 009410 264 PPLLEGEATTRAIRLAEF-VNTPLYVVHVMSMDAMEEIAKARKAG 307 (535)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~-~~~~~~~~H~~~~~~~~~~~~~~~~g 307 (535)
+...+...+.+.++++.+ .+.++ +.|+..... +.++.+++.+
T Consensus 148 ~~~~Q~~~F~~ql~lA~e~~~lPv-iiH~r~A~~-d~l~iL~~~~ 190 (325)
T 3ipw_A 148 DKETQLSGYRTLSILHQKYPYLPF-FFHCRKSWS-DLCQLNKELG 190 (325)
T ss_dssp CHHHHHHHHHHTHHHHHHCTTCCE-EEEEESCHH-HHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHhhCCeE-EEEeCchHH-HHHHHHHhcC
Confidence 445566778899999999 99997 568877665 7888888765
No 157
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=36.33 E-value=2.8e+02 Score=26.10 Aligned_cols=110 Identities=10% Similarity=-0.059 Sum_probs=60.3
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..++-++..+.. +. .+.++...+.... +.....+....+ .+..+..+ .+
T Consensus 50 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g---rvpViaGvg~~st~eai~la~-~A 125 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG---RRTLMAGIGALRTDEAVALAK-DA 125 (332)
T ss_dssp CCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT---SSEEEEEECCSSHHHHHHHHH-HH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCCCHHHHHHHHH-HH
Confidence 55667777777778889999998765443332 22 2222333222211 223333333333 34444333 34
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++ .|...++|+.++-
T Consensus 126 ~~~Gadavlv~~P~Y--~~~s~~~l~~~f~~VA~a~~lPiilYn 167 (332)
T 2r8w_A 126 EAAGADALLLAPVSY--TPLTQEEAYHHFAAVAGATALPLAIYN 167 (332)
T ss_dssp HHHTCSEEEECCCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred HhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 478999986643332 3346666655554 4556688988764
No 158
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=35.95 E-value=2.7e+02 Score=25.91 Aligned_cols=118 Identities=14% Similarity=0.102 Sum_probs=64.3
Q ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccccc
Q 009410 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
++.+. +.|++++-+..+......++.++-.++++.+.+ ..+++.+++.. .....+..+.+.+.|......-...
T Consensus 51 v~~li-~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 129 (315)
T 3na8_A 51 IERLI-DGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPIS 129 (315)
T ss_dssp HHHHH-HTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 33444 678888755433334466788877777776654 35788888743 3444455556677777553211111
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHH-HHc
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKA-RKA 306 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~-~~~ 306 (535)
.....+..-+...-.++...+.++.+.+..... ..+.+.++ ++.
T Consensus 130 y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~ 178 (315)
T 3na8_A 130 YWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREV 178 (315)
T ss_dssp SSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcC
Confidence 111122222333334566668999988863211 12566666 543
No 159
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=35.95 E-value=2.7e+02 Score=25.82 Aligned_cols=115 Identities=4% Similarity=-0.145 Sum_probs=60.5
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccccccceeeeeecC-ChhhHHHHHHHHHHc
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKW-DEVVSDEMEVMVKEK 195 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 195 (535)
+..+.+.+.......+.+||..++-.+..+.. +..+..+..........-+.....+.... ..+..+.. +.+++.
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la-~~A~~~ 108 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMT-VSMAQV 108 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHH-HHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHH-HHHHHc
Confidence 55667777777778889999988865443332 22222222222211111122333333322 23444433 344478
Q ss_pred CCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 196 GINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
|++.+-+..-+...+..+.+.+.+-++ .|...++|+...-
T Consensus 109 Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn 149 (307)
T 3s5o_A 109 GADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYS 149 (307)
T ss_dssp TCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEe
Confidence 999987654333222246665555544 4555688988764
No 160
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=35.88 E-value=1.9e+02 Score=27.24 Aligned_cols=105 Identities=13% Similarity=0.015 Sum_probs=66.9
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh--cCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009410 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS--LGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (535)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~--~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (535)
+-+..+.+-+.+++.+...|--. +.........+.+..++..+.+ .++|+..|...... .+.+...++.|+++.--
T Consensus 27 n~e~~~Ail~AAee~~sPvIlq~-s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHlDHg~~-~e~i~~ai~~GFtSVMi 104 (323)
T 2isw_A 27 NMEQIQGIMKAVVQLKSPVILQC-SRGALKYSDMIYLKKLCEAALEKHPDIPICIHLDHGDT-LESVKMAIDLGFSSVMI 104 (323)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEE-EHHHHHHTTTHHHHHHHHHHHHHCTTSCEEEEEEEECS-HHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEC-ChhHHHhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCC-HHHHHHHHHcCCCeEEe
Confidence 34556666666656666665322 2111111234555566665555 68999999854433 24466677889988766
Q ss_pred ccccCChhhHHHHHHHHHHHHHhcCCCEE
Q 009410 259 HALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (535)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (535)
.....|.........+.++++...|..+-
T Consensus 105 DgS~~p~eENi~~Tk~vv~~ah~~gvsVE 133 (323)
T 2isw_A 105 DASHHPFDENVRITKEVVAYAHARSVSVE 133 (323)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 66667877777888899999988876654
No 161
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=35.52 E-value=2.9e+02 Score=26.10 Aligned_cols=110 Identities=9% Similarity=-0.015 Sum_probs=60.2
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
+..+.+.+.......+.+||..++-++..+.. +. .+.++...+... -+.....+....+ .+..+..+ .+
T Consensus 47 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg~~st~eai~la~-~A 122 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVD---RRVPVLIGTGGTNARETIELSQ-HA 122 (343)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCSSCHHHHHHHHH-HH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHH-HH
Confidence 45666777777788889999988755443332 22 222233322221 1223333333333 34444333 34
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++. |...++|+.++-
T Consensus 123 ~~~Gadavlv~~P~Y--~~~s~~~l~~~f~~VA~a~~lPiilYn 164 (343)
T 2v9d_A 123 QQAGADGIVVINPYY--WKVSEANLIRYFEQVADSVTLPVMLYN 164 (343)
T ss_dssp HHHTCSEEEEECCSS--SCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred HhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 478999987654332 23466666655544 556688988764
No 162
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=35.19 E-value=2.7e+02 Score=25.68 Aligned_cols=110 Identities=13% Similarity=0.023 Sum_probs=59.8
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..++-++..+.. +. .+.++...+... -+.....+....+ .+..+..+. +
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~---grvpViaGvg~~~t~~ai~la~~-A 103 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVD---KRVPVIAGTGSNNTHASIDLTKK-A 103 (301)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCceEEeCCCCCCHHHHHHHHHH-H
Confidence 44566667777777889999998865443332 22 222222222221 1223333333323 344444433 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++. |...++|+..+-
T Consensus 104 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 145 (301)
T 1xky_A 104 TEVGVDAVMLVAPYY--NKPSQEGMYQHFKAIAESTPLPVMLYN 145 (301)
T ss_dssp HHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred HhcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 478999987654332 23466666655544 556688988764
No 163
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=35.15 E-value=2.8e+02 Score=25.82 Aligned_cols=117 Identities=15% Similarity=0.066 Sum_probs=63.8
Q ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccccc
Q 009410 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
++.+. +.|++++-+..+......++.++-.++++.+.+ ..+++.+++.. .....+..+.+.+.|......-...
T Consensus 49 i~~li-~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~ 127 (315)
T 3si9_A 49 VEWQI-TQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPY 127 (315)
T ss_dssp HHHHH-HTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHH-HcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 33444 678888754333333456788877777776654 35788888743 3444455566677777553211111
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
.....+..-+...-.++...+.++.+.+..... ..+.+.++++
T Consensus 128 y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 128 YNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp SSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 111112222333334556668999988863211 1256666665
No 164
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=34.87 E-value=2.7e+02 Score=25.54 Aligned_cols=110 Identities=10% Similarity=-0.074 Sum_probs=59.0
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..+.-++..+.. +. .+.++...+.... +.....+....+ .+..+.. +.+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la-~~A 91 (292)
T 2vc6_A 16 DRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG---RVPVIAGAGSNSTAEAIAFV-RHA 91 (292)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHH-HHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCccHHHHHHHH-HHH
Confidence 44556667777777889999998865443332 22 2222333322211 222333333322 3344333 334
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++ .|...++|+..+-
T Consensus 92 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (292)
T 2vc6_A 92 QNAGADGVLIVSPYY--NKPTQEGIYQHFKAIDAASTIPIIVYN 133 (292)
T ss_dssp HHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HHcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 478999986654332 2346666665554 3556688988764
No 165
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=34.55 E-value=2.3e+02 Score=26.12 Aligned_cols=50 Identities=8% Similarity=-0.113 Sum_probs=34.2
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc--CCeEEEEcCCh
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAENG 238 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~v~~H~~~~ 238 (535)
.++.+.+.+.|++.+.+. +..|. .++....++++..++. ++++..|..++
T Consensus 162 ~~~~~~~~~~G~d~i~l~-DT~G~--~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~ 213 (302)
T 2ftp_A 162 AWVARELQQMGCYEVSLG-DTIGV--GTAGATRRLIEAVASEVPRERLAGHFHDT 213 (302)
T ss_dssp HHHHHHHHHTTCSEEEEE-ESSSC--CCHHHHHHHHHHHTTTSCGGGEEEEEBCT
T ss_pred HHHHHHHHHcCCCEEEEe-CCCCC--cCHHHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 333333337899988775 55554 5788888888887654 47899998554
No 166
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=34.48 E-value=2.8e+02 Score=25.88 Aligned_cols=112 Identities=8% Similarity=-0.065 Sum_probs=57.7
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChH---HHHHHHHHHhcccccccceeeeeecC-ChhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKW-DEVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 192 (535)
+..+.+.+.......+.+||..++-.+..+.. +.. +.++...+... -+.....+.... ..+..+..+. +
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~-a 102 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVG---PDFPIMAGVGAHSTRQVLEHIND-A 102 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHC---TTSCEEEECCCSSHHHHHHHHHH-H
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHH-H
Confidence 44566667777778889999988865443332 222 22222222221 122333333332 3344444444 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHH-HHHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+.-....+.+.+.+-+ ..|...++++...-
T Consensus 103 ~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn 146 (318)
T 3qfe_A 103 SVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYN 146 (318)
T ss_dssp HHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEe
Confidence 47899998664331111113555554444 44556688888764
No 167
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=34.39 E-value=2.7e+02 Score=25.48 Aligned_cols=119 Identities=14% Similarity=0.029 Sum_probs=65.6
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+ ...++.+|+.. .....+..+.+.+.|......-.
T Consensus 26 ~lv~~li-~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 26 KLVEWHI-EQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHH-HHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHH-HCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3334444 689998855433333466788887777776654 35789989844 44444555667777876542111
Q ss_pred ccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
.......+..-+...-.++...+.++.+.+..... ..+.+.++++
T Consensus 105 P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (291)
T 3tak_A 105 PYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAE 153 (291)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHc
Confidence 11111112222333334566668999888863211 1255666653
No 168
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=34.26 E-value=2.8e+02 Score=25.47 Aligned_cols=118 Identities=11% Similarity=-0.012 Sum_probs=63.8
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+. ..++.+++.. .....+..+...+.|......-.
T Consensus 25 ~lv~~li-~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 25 DLVEWQI-EEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHH-HTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcC
Confidence 3334444 6788887543333334567888877777766643 5788888844 33344455566777776532111
Q ss_pred ccCChhhHHHHHHH-HHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 261 LSRPPLLEGEATTR-AIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 261 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
....... .+.+.+ .-.++...+.++.+.+..... ..+.+.++.+
T Consensus 104 P~y~~~s-~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 104 PYYNKPT-QEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp CCSSCCC-HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred CCCCCCC-HHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 1111111 233333 334566668899887753211 1255666655
No 169
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=33.99 E-value=2.8e+02 Score=25.46 Aligned_cols=110 Identities=13% Similarity=0.029 Sum_probs=59.5
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..+.-++..+.. +. .+.++...+.... +.....+....+ .+..+..+. +
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~-A 91 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG---RIKVIAGTGGNATHEAVHLTAH-A 91 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT---SSEEEEECCCSCHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCCCHHHHHHHHHH-H
Confidence 44566667777777889999998865443332 22 2222332222211 222333333322 334443333 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++. |...++|+..+-
T Consensus 92 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 133 (294)
T 2ehh_A 92 KEVGADGALVVVPYY--NKPTQRGLYEHFKTVAQEVDIPIIIYN 133 (294)
T ss_dssp HHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred HhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 478999987654332 23466666655543 556688988764
No 170
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=33.52 E-value=2.7e+02 Score=25.53 Aligned_cols=110 Identities=11% Similarity=-0.031 Sum_probs=59.2
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..+.-++..+.. +. .+.++...+.... +.....+....+ .+..+.. +.+
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la-~~a 92 (292)
T 2ojp_A 17 GNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG---RIPVIAGTGANATAEAISLT-QRF 92 (292)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHH-HHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCccHHHHHHHH-HHH
Confidence 45666777777778889999998765443332 22 2222332222211 223333333322 3333333 333
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++. |...++|+..+-
T Consensus 93 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (292)
T 2ojp_A 93 NDSGIVGCLTVTPYY--NRPSQEGLYQHFKAIAEHTDLPQILYN 134 (292)
T ss_dssp TTSSCSEEEEECCCS--SCCCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred HhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 368999886653332 33466666666554 555688988764
No 171
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=33.29 E-value=3e+02 Score=25.60 Aligned_cols=110 Identities=11% Similarity=0.013 Sum_probs=60.0
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (535)
|..+.+.+.......+.+||..++-.+..+.. +. .+.++...+.... +.....+......+..+..+. ++
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~g---rvpViaGvg~~t~~ai~la~~-A~ 103 (316)
T 3e96_A 28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHG---RALVVAGIGYATSTAIELGNA-AK 103 (316)
T ss_dssp CCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT---SSEEEEEECSSHHHHHHHHHH-HH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC---CCcEEEEeCcCHHHHHHHHHH-HH
Confidence 45666777777788899999999866544332 22 2223333332211 122223333233444444444 44
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
+.|++.+-+..-+. ...+.+.+.+-++ .|...++|+...-
T Consensus 104 ~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 144 (316)
T 3e96_A 104 AAGADAVMIHMPIH--PYVTAGGVYAYFRDIIEALDFPSLVYF 144 (316)
T ss_dssp HHTCSEEEECCCCC--SCCCHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred hcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 78999987643332 3346666555444 4455689988774
No 172
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=33.25 E-value=3e+02 Score=25.59 Aligned_cols=117 Identities=12% Similarity=0.003 Sum_probs=63.7
Q ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccccc
Q 009410 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
++.+. +.|++++-+..+......++.++-.++++.+.+ ..+++.+++.. .....+..+.+.+.|......-...
T Consensus 50 v~~li-~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (314)
T 3qze_A 50 VDFHL-QEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPY 128 (314)
T ss_dssp HHHHH-HHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 33344 678888755433334466788777777766554 24788888844 3444455566677777553211111
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
.....+..-+...-.++...+.++.+.+..... ..+.+.++++
T Consensus 129 y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 175 (314)
T 3qze_A 129 YNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSK 175 (314)
T ss_dssp SSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 111112222333334566668999988863211 1255666664
No 173
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=32.44 E-value=2.8e+02 Score=26.02 Aligned_cols=31 Identities=6% Similarity=0.140 Sum_probs=22.7
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcC
Q 009410 394 MHLVWDTMVESGQISVTDYVRLTSTECARIFN 425 (535)
Q Consensus 394 l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg 425 (535)
++.+...+. +.|+|.+++=+.+-.|..+++.
T Consensus 290 ~~~l~~~L~-~~G~se~~i~ki~g~N~lRvl~ 320 (325)
T 2i5g_A 290 FPNLTETLL-KRGMPERVVRKVMGENWVRVLR 320 (325)
T ss_dssp THHHHHHHH-HTTCCHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHH
Confidence 444444444 4469999999999999998875
No 174
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=32.07 E-value=3.3e+02 Score=25.73 Aligned_cols=117 Identities=10% Similarity=0.087 Sum_probs=66.2
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccccCC
Q 009410 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALSRP 264 (535)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (535)
.++.++ +.|++++-+..+......++.++..++++.+....+++.+++.. .....+..+.+.+.|......-.....
T Consensus 52 lv~~li-~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~ 130 (344)
T 2hmc_A 52 KGKELI-ADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLS 130 (344)
T ss_dssp HHHHHH-HTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred HHHHHH-HcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccC
Confidence 333444 67888875543333446788888888888754556889999854 334444555666777765321111111
Q ss_pred h-hhHHHHHHHHH-HHHH-hcCCCEEEEEcc----CHHHHHHHHHH-HHc
Q 009410 265 P-LLEGEATTRAI-RLAE-FVNTPLYVVHVM----SMDAMEEIAKA-RKA 306 (535)
Q Consensus 265 ~-~~~~~~~~~~~-~~~~-~~~~~~~~~H~~----~~~~~~~~~~~-~~~ 306 (535)
. .. .+.+.+.+ .++. ..+.++.+.+.. ... .+.+.++ ++.
T Consensus 131 ~~~s-~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~-~e~~~~L~a~~ 178 (344)
T 2hmc_A 131 RGSV-IAAQKAHFKAILSAAPEIPAVIYNSPYYGFATR-ADLFFALRAEH 178 (344)
T ss_dssp STTC-HHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCC-HHHHHHHHHHC
T ss_pred CCCC-HHHHHHHHHHHHhhCCCCcEEEEecCccCCCcC-HHHHHHHHhcC
Confidence 1 11 23344333 3455 567899888865 112 2566666 543
No 175
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=32.02 E-value=2e+02 Score=25.58 Aligned_cols=97 Identities=11% Similarity=0.109 Sum_probs=52.9
Q ss_pred chhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEE
Q 009410 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKF 202 (535)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~ 202 (535)
+++......++++..|++.+.-... .....+.++...+..+...+..+ +-.+ .+.++... +.|++++-
T Consensus 44 ~~~~a~~~a~al~~gGi~~iEvt~~--t~~a~e~I~~l~~~~~~~~iGaG-----TVlt---~~~a~~Ai-~AGA~fIv- 111 (232)
T 4e38_A 44 NAEDIIPLGKVLAENGLPAAEITFR--SDAAVEAIRLLRQAQPEMLIGAG-----TILN---GEQALAAK-EAGATFVV- 111 (232)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETT--STTHHHHHHHHHHHCTTCEEEEE-----CCCS---HHHHHHHH-HHTCSEEE-
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCC--CCCHHHHHHHHHHhCCCCEEeEC-----CcCC---HHHHHHHH-HcCCCEEE-
Confidence 4555666677888899997752211 12345566655554332211111 1111 34455555 77888873
Q ss_pred EeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhH
Q 009410 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (535)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~ 241 (535)
. +..++ ++++.++++|+++..-+.+..++
T Consensus 112 --s----P~~~~----~vi~~~~~~gi~~ipGv~TptEi 140 (232)
T 4e38_A 112 --S----PGFNP----NTVRACQEIGIDIVPGVNNPSTV 140 (232)
T ss_dssp --C----SSCCH----HHHHHHHHHTCEEECEECSHHHH
T ss_pred --e----CCCCH----HHHHHHHHcCCCEEcCCCCHHHH
Confidence 1 22343 45566777899887666655443
No 176
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=32.01 E-value=3.2e+02 Score=25.44 Aligned_cols=110 Identities=8% Similarity=-0.053 Sum_probs=60.3
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (535)
+..+.+.+.......+.+||..++-++..+.. +. .+.++...+... -+.+...+......+..+.. +.++
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~---grvpViaGvg~st~~ai~la-~~A~ 103 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVN---GRATVVAGIGYSVDTAIELG-KSAI 103 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEECSSHHHHHHHH-HHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhC---CCCeEEecCCcCHHHHHHHH-HHHH
Confidence 45667777777788899999998865443332 22 222233232221 12333333433223444433 3344
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
+.|++++-+..-+. ...+.+.+.+-++ .|...++|+.++-
T Consensus 104 ~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 104 DSGADCVMIHQPVH--PYITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp HTTCSEEEECCCCC--SCCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred HcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 78999986643332 2346666655554 4556689988865
No 177
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=31.91 E-value=3.1e+02 Score=25.33 Aligned_cols=110 Identities=10% Similarity=-0.015 Sum_probs=60.5
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..++-.+..+.. +. .+.++...+... -+.+...+....+ .+..+..+. +
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~st~~ai~la~~-A 107 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG---DRAKLIAGVGTNNTRTSVELAEA-A 107 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT---TTSEEEEECCCSCHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEecCCCCCHHHHHHHHHH-H
Confidence 45667777777888899999998865443332 22 222233322221 1223333333323 344444433 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++ .|...++|+...-
T Consensus 108 ~~~Gadavlv~~P~y--~~~~~~~l~~~f~~ia~a~~lPiilYn 149 (304)
T 3cpr_A 108 ASAGADGLLVVTPYY--SKPSQEGLLAHFGAIAAATEVPICLYD 149 (304)
T ss_dssp HHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred HhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 478999987654332 2346666655554 4556688988753
No 178
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=31.85 E-value=3.1e+02 Score=25.32 Aligned_cols=110 Identities=10% Similarity=-0.035 Sum_probs=58.6
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..+.-++..+.. +. .+.++...+... -+.....+....+ .+..+..+. +
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~---grvpViaGvg~~~t~~ai~la~~-A 102 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK---GKIKLIAHVGCVSTAESQQLAAS-A 102 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEECCCSSHHHHHHHHHH-H
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHH-H
Confidence 34556666677777889999998866544332 22 222232222221 1223333333323 344443433 4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHH-HHhcC-CeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLG-ALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~g-~~v~~H~ 235 (535)
++.|++++-+..-+. ...+.+.+.+-++. |...+ +|+..+-
T Consensus 103 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~~lPiilYn 145 (303)
T 2wkj_A 103 KRYGFDAVSAVTPFY--YPFSFEEHCDHYRAIIDSADGLPMVVYN 145 (303)
T ss_dssp HHHTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HhCCCCEEEecCCCC--CCCCHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 478999987654332 23466666655543 44556 8988764
No 179
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=31.83 E-value=2e+02 Score=25.72 Aligned_cols=87 Identities=13% Similarity=0.088 Sum_probs=54.9
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCC---CcCCHHHHHHHHHHHHhcCCe---EEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSLGAL---AMVHAENGDAVFEGQKRMIELGITGPEG 258 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~a~~~g~~---v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (535)
.+.++. +++.|.+++-++...... ...+.+.+.++.+.++++|+. +.+|..... .+.
T Consensus 15 ~~~l~~-~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~------------~l~---- 77 (285)
T 1qtw_A 15 ANAAIR-AAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLI------------NLG---- 77 (285)
T ss_dssp HHHHHH-HHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTC------------CTT----
T ss_pred HHHHHH-HHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCccc------------ccC----
Confidence 334444 448899999875332211 235678889999999999998 677763210 000
Q ss_pred ccccCCh----hhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 009410 259 HALSRPP----LLEGEATTRAIRLAEFVNTPLYVVHVM 292 (535)
Q Consensus 259 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~H~~ 292 (535)
.+. ....+.+.+.++++...|.+....|..
T Consensus 78 ----~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g 111 (285)
T 1qtw_A 78 ----HPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG 111 (285)
T ss_dssp ----CSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECcC
Confidence 011 112355778899999999998887754
No 180
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=31.55 E-value=3.2e+02 Score=25.41 Aligned_cols=123 Identities=10% Similarity=-0.033 Sum_probs=71.8
Q ss_pred HHHHHHHHHHcCCCEEEEEeec--CCCCcCCHHHHHHHHHHHHhc-CCeEEE-EcCChhhHHHHHHHHHHcCCC--Cccc
Q 009410 185 SDEMEVMVKEKGINSFKFFMAY--KGSFMINDELLIEGFKRCKSL-GALAMV-HAENGDAVFEGQKRMIELGIT--GPEG 258 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~--~~~~~~~~~~l~~~~~~a~~~-g~~v~~-H~~~~~~~~~~~~~~~~~g~~--~~~~ 258 (535)
.+...++. +.|++.+-+-... ++....+.++..++++...+. ++++++ -..+.....+..+...+.|.. ....
T Consensus 77 ~~~A~~~v-~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iIN 155 (310)
T 2h9a_B 77 VAWAKKCV-EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLS 155 (310)
T ss_dssp HHHHHHHH-HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEE
T ss_pred HHHHHHHH-HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEE
Confidence 34444555 7899998876532 333345667766677766654 889988 664444444455555555542 1110
Q ss_pred ccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH-HHHHHHHHHHcCC---cEEeccc
Q 009410 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD-AMEEIAKARKAGQ---RVIGEPV 315 (535)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~g~---~v~~~~~ 315 (535)
. ... ....+++.++..++.++.+.|....+ ..+.++.+.+.|+ .++..|.
T Consensus 156 d---vs~----~~~~~~~~~aa~~g~~vv~m~~~dv~~l~~~~~~a~~~Gi~~e~IilDPg 209 (310)
T 2h9a_B 156 S---ATK----DNYKPIVATCMVHGHSVVASAPLDINLSKQLNIMIMEMNLAPNRIIMDPL 209 (310)
T ss_dssp E---ECT----TTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECC
T ss_pred E---CCC----CccHHHHHHHHHhCCCEEEEChhHHHHHHHHHHHHHHCCCChhhEEEeCC
Confidence 0 000 12456777888899999999974322 2345566677786 3555554
No 181
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=31.50 E-value=2.7e+02 Score=25.56 Aligned_cols=108 Identities=8% Similarity=0.009 Sum_probs=58.8
Q ss_pred CchhhhHHHHHHHHhCCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHHHH
Q 009410 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMVKE 194 (535)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 194 (535)
.+.+.+.......+.+||..+.-++..+.. +. .+.++...+.... +.+...+....+ .+..+.. +.+++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g---r~pvi~Gvg~~~t~~ai~la-~~a~~ 94 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK---RIPVIAGTGSNNTAASIAMS-KWAES 94 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHH-HHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---CCcEEEeCCcccHHHHHHHH-HHHHh
Confidence 666677777788899999998755443332 22 2222333222211 223333333333 3344433 33447
Q ss_pred cCCCEEEEEeecCCCCcCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009410 195 KGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (535)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H~ 235 (535)
.|++++-+..-+. ...+.+.+.+-++. |...++|+..+-
T Consensus 95 ~Gadavlv~~P~y--~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3a5f_A 95 IGVDGLLVITPYY--NKTTQKGLVKHFKAVSDAVSTPIIIYN 134 (291)
T ss_dssp TTCSEEEEECCCS--SCCCHHHHHHHC-CTGGGCCSCEEEEE
T ss_pred cCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 8999987654332 23466666655544 555688988764
No 182
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=31.47 E-value=1.7e+02 Score=27.57 Aligned_cols=50 Identities=10% Similarity=0.161 Sum_probs=31.7
Q ss_pred HHHHHHHHHHcCCCEEEEEeec-CC------CCc--CCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMAY-KG------SFM--INDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~-~~------~~~--~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
.++..++.++.|++.+-+.... || .+. ++.+.|+++-+.. +++++.|-.+
T Consensus 155 Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~---~vpLVlHGgS 213 (323)
T 2isw_A 155 PQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLT---GIPLVMHGSS 213 (323)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHH---CSCEEECSCC
T ss_pred HHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHh---CCCeEEECCC
Confidence 4556666667899988765442 33 334 5667777765443 8999999644
No 183
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=30.58 E-value=3.2e+02 Score=25.03 Aligned_cols=42 Identities=19% Similarity=0.251 Sum_probs=31.5
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCEEEEEccCHHHHHHHHHHHHcC
Q 009410 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAG 307 (535)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~g 307 (535)
+...+...+.+.++++.+.+.++ +.|+..... +.++.+++.+
T Consensus 108 ~~~~Q~~~F~~ql~lA~e~~lPv-~iH~r~a~~-~~l~il~~~~ 149 (287)
T 3rcm_A 108 PRPLQEKALEAQLTLAAQLRLPV-FLHERDASE-RLLAILKDYR 149 (287)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCE-EEEEESCHH-HHHHHHHTTG
T ss_pred cHHHHHHHHHHHHHHHHHhCCCE-EEEcCCcHH-HHHHHHHHcC
Confidence 44455677889999999999997 568876655 7777777654
No 184
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=30.47 E-value=1.5e+02 Score=28.62 Aligned_cols=91 Identities=7% Similarity=0.100 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
++.+.++.+.+.+++.|+++..-+-+...+ +.+.+.+.....- .... ..-..+++.....+.|+++.-.
T Consensus 98 l~~e~~~~L~~~~~~~Gi~~~stpfD~~sv----d~l~~~~vd~~KI---gS~~----~~N~pLL~~va~~gKPViLStG 166 (385)
T 1vli_A 98 MPAEWILPLLDYCREKQVIFLSTVCDEGSA----DLLQSTSPSAFKI---ASYE----INHLPLLKYVARLNRPMIFSTA 166 (385)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECBCCSHHHH----HHHHTTCCSCEEE---CGGG----TTCHHHHHHHHTTCSCEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCcEEEccCCHHHH----HHHHhcCCCEEEE---Cccc----ccCHHHHHHHHhcCCeEEEECC
Confidence 577889999999999999998766655443 3333344332110 0000 1112345555567888877544
Q ss_pred -cCHHHHH-HHHHHHHcCC-cEEec
Q 009410 292 -MSMDAME-EIAKARKAGQ-RVIGE 313 (535)
Q Consensus 292 -~~~~~~~-~~~~~~~~g~-~v~~~ 313 (535)
++.++++ .++.+.+.|. .++.+
T Consensus 167 maTl~Ei~~Ave~i~~~Gn~~iiLl 191 (385)
T 1vli_A 167 GAEISDVHEAWRTIRAEGNNQIAIM 191 (385)
T ss_dssp TCCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCcEEEE
Confidence 3333333 2333455554 55554
No 185
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=30.26 E-value=3.2e+02 Score=25.04 Aligned_cols=113 Identities=13% Similarity=0.086 Sum_probs=61.3
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHHHHc
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMVKEK 195 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 195 (535)
|..+.+.+.......+.+||..+.-++..+.. +..+..+..........-+.....+....+ .+..+.. +.+++.
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la-~~A~~~ 97 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQS-AEALNA 97 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHH-HHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHH-HHHHhc
Confidence 45666777777788899999998865544332 222222222222111111233334444333 3344433 334478
Q ss_pred CCCEEEEEeecCCCCc-CCHHHHHHHHHH-HHhc---CCeEEEEc
Q 009410 196 GINSFKFFMAYKGSFM-INDELLIEGFKR-CKSL---GALAMVHA 235 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~-~~~~~l~~~~~~-a~~~---g~~v~~H~ 235 (535)
|++++-+..-+. .. .+.+.+.+-++. |... ++|+..+-
T Consensus 98 Gadavlv~~P~y--~~~~s~~~l~~~f~~va~a~p~~~lPiilYn 140 (294)
T 3b4u_A 98 GARNILLAPPSY--FKNVSDDGLFAWFSAVFSKIGKDARDILVYN 140 (294)
T ss_dssp TCSEEEECCCCS--SCSCCHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred CCCEEEEcCCcC--CCCCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 999987653332 23 466666665554 5555 79988764
No 186
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=30.24 E-value=3e+02 Score=24.62 Aligned_cols=110 Identities=12% Similarity=-0.004 Sum_probs=64.9
Q ss_pred HHHHHHHHcCCCEEEEEeecC-CCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCh
Q 009410 187 EMEVMVKEKGINSFKFFMAYK-GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPP 265 (535)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 265 (535)
+..+.+++.|.+++-++..+. .....+.+.+.++.+.++++|+.+..|...... .. ....
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~-------------~~------~~~~ 79 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDI-------------SL------SADF 79 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCC-------------ST------TSCH
T ss_pred HHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCC-------------CC------chhH
Confidence 333344488999998753210 011134678888899999999999888532100 00 0011
Q ss_pred hhHHHHHHHHHHHHHhcCCCEEEEEccCH--------------HHH-HHHHHHHHcCCcEEeccc
Q 009410 266 LLEGEATTRAIRLAEFVNTPLYVVHVMSM--------------DAM-EEIAKARKAGQRVIGEPV 315 (535)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~--------------~~~-~~~~~~~~~g~~v~~~~~ 315 (535)
....+.+.+.++++...|.+....|.... +.+ +..+.+++.|+.+..++.
T Consensus 80 ~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 144 (286)
T 3dx5_A 80 EKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETH 144 (286)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecC
Confidence 22245677888999999998877775431 111 223344567888877654
No 187
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=29.99 E-value=3.3e+02 Score=24.99 Aligned_cols=107 Identities=8% Similarity=0.001 Sum_probs=55.4
Q ss_pred chhhhHHHHHHHHhCCcEEEeccccCCCC---ChH---HHHHHHHHHhcccccccceeeeeecC-ChhhHHHHHHHHHHc
Q 009410 123 TIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKW-DEVVSDEMEVMVKEK 195 (535)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 195 (535)
+.+.+.......+.+||..+.-.+..+.. +.. +.++...+... -+.....+.... ..+..+..+ .+++.
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~-~a~~~ 96 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVD---KRVPVIAGTGTNDTEKSIQASI-QAKAL 96 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhC---CCCcEEEeCCcccHHHHHHHHH-HHHHc
Confidence 34455566667789999998865443332 122 22333322221 122333333332 334444443 34478
Q ss_pred CCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 196 GINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
|++++-+..-+. ...+.+.+.+-++ .|...++|+...-
T Consensus 97 Gadavlv~~P~y--~~~~~~~l~~~f~~ia~a~~lPiilYn 135 (292)
T 3daq_A 97 GADAIMLITPYY--NKTNQRGLVKHFEAIADAVKLPVVLYN 135 (292)
T ss_dssp TCSEEEEECCCS--SCCCHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 999987654332 2345555554443 4455689988763
No 188
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=29.90 E-value=2.9e+02 Score=24.35 Aligned_cols=62 Identities=13% Similarity=0.101 Sum_probs=43.9
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh----hhHHHHHHHHHHcCCCCcc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG----DAVFEGQKRMIELGITGPE 257 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~----~~~~~~~~~~~~~g~~~~~ 257 (535)
++.|++++-+-.-. ....++.+.++++++.|+ ++++..|-.-+ ....+.++.+.+.|+..+.
T Consensus 86 ~~~GadGvV~G~Lt-~dg~iD~~~~~~Li~~a~--~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rIL 151 (224)
T 2bdq_A 86 VELESDALVLGILT-SNNHIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRIL 151 (224)
T ss_dssp HHTTCSEEEECCBC-TTSSBCHHHHHHHHHHHT--TCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEE
T ss_pred HHcCCCEEEEeeEC-CCCCcCHHHHHHHHHHhC--CCeEEEECchhccCCcCHHHHHHHHHHcCCCEEE
Confidence 47899998653221 123578999999998886 78999996332 3345677888888887654
No 189
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=29.54 E-value=45 Score=32.95 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=43.3
Q ss_pred hhhHHHHHHHHHHcCCCEEEEEeec----CCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009410 182 EVVSDEMEVMVKEKGINSFKFFMAY----KGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (535)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~----~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 238 (535)
+...+++++.. +.|..++++...+ .+...++...+..+.+.+.++|++|.+|....
T Consensus 175 ~~a~~EL~r~~-~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~ 234 (423)
T 4dzi_A 175 TRAVEEVDFVL-ARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDS 234 (423)
T ss_dssp HHHHHHHHHHH-HTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHHHH-HcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCC
Confidence 45678888888 5899999986432 23344567889999999999999999999654
No 190
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=29.43 E-value=2.6e+02 Score=25.79 Aligned_cols=117 Identities=10% Similarity=0.086 Sum_probs=61.7
Q ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEc--CChhhHHHHHHHHHHcCCCCccccccc
Q 009410 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHA--ENGDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~--~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
++.++ +.|++++-+..+......++.++-.++++.+.+. .+++.+++ .+.....+..+.+.+.|......-...
T Consensus 31 v~~li-~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 109 (300)
T 3eb2_A 31 CDDLI-QAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEA 109 (300)
T ss_dssp HHHHH-HTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred HHHHH-HcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 33344 6787776332222233567777777777666543 46777776 344445555566677777554211111
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
.....+..-+...-.++...+.++.+.+..... ..+.+.++++
T Consensus 110 y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 156 (300)
T 3eb2_A 110 YFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAE 156 (300)
T ss_dssp SSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHHc
Confidence 111112222333334566678999988864311 1256666654
No 191
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=29.22 E-value=31 Score=32.11 Aligned_cols=33 Identities=24% Similarity=0.196 Sum_probs=25.8
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
++|.|+|...+ .|..+++++ ...+.+.|++.+.
T Consensus 3 ~~DLH~Ht~~S-Dg~~~~~el---v~~A~~~Gl~~ia 35 (292)
T 2yb1_A 3 NIDLHFHSRTS-DGALTPTEV---IDRAAARAPALLA 35 (292)
T ss_dssp CEECCBCCTTT-TCSSCHHHH---HHHHHTTCCSEEE
T ss_pred ccccccCCCcc-CCCCCHHHH---HHHHHHCCCCEEE
Confidence 68999999766 566666654 7778899998775
No 192
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=29.19 E-value=3.5e+02 Score=25.06 Aligned_cols=115 Identities=13% Similarity=0.173 Sum_probs=66.7
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+. .+++.+++.. .....+..+...+.|......-.
T Consensus 33 ~lv~~li-~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 33 RAVDFMI-DAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp HHHHHHH-HTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHH-HcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcC
Confidence 3344444 7899888664444445677888888777776653 5789999843 44444555667777775432111
Q ss_pred c-----cCChhhHHHHHHH-HHHHHHhcCCCEEEEEccC----HHHHHHHHHHHH
Q 009410 261 L-----SRPPLLEGEATTR-AIRLAEFVNTPLYVVHVMS----MDAMEEIAKARK 305 (535)
Q Consensus 261 ~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~~~----~~~~~~~~~~~~ 305 (535)
. ..|. .+.+.+ .-.++...+.++.+.+... .. .+.+.++++
T Consensus 112 Pyy~~~~~~s---~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~-~~~~~~La~ 162 (309)
T 3fkr_A 112 PYHGATFRVP---EAQIFEFYARVSDAIAIPIMVQDAPASGTALS-APFLARMAR 162 (309)
T ss_dssp SCBTTTBCCC---HHHHHHHHHHHHHHCSSCEEEEECGGGCCCCC-HHHHHHHHH
T ss_pred CCCccCCCCC---HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCC-HHHHHHHHh
Confidence 1 1221 233333 3345666789998888632 12 266666764
No 193
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=29.17 E-value=3.3e+02 Score=24.82 Aligned_cols=118 Identities=12% Similarity=-0.006 Sum_probs=63.5
Q ss_pred hhHHHHHHHHHHcCCCEEEEEeecCCC-----CcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009410 183 VVSDEMEVMVKEKGINSFKFFMAYKGS-----FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (535)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~-----~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (535)
+...++.+.+++.|++.+|++.--+.. .....+.++.+.+.+++.|+++..-..+...++...+. .+....+..
T Consensus 52 e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~kIgs~ 130 (276)
T 1vs1_A 52 EQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY-ADMLQIGAR 130 (276)
T ss_dssp HHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH-CSEEEECGG
T ss_pred HHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh-CCeEEECcc
Confidence 333444444447788888765322111 11247889999999999999999888777665544432 221111100
Q ss_pred cccccCChhhHHHHHHHHHHHHHhcCCCEEEEEccC---HHHHHHHHHHHHcCC-cEEe
Q 009410 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS---MDAMEEIAKARKAGQ-RVIG 312 (535)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~---~~~~~~~~~~~~~g~-~v~~ 312 (535)
. ..-..+++.....+.++.+--... .+-...++.+...|. .++.
T Consensus 131 --------~---~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L 178 (276)
T 1vs1_A 131 --------N---MQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVL 178 (276)
T ss_dssp --------G---TTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred --------c---ccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEE
Confidence 0 011123344445688887765554 232334444555554 3443
No 194
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=28.83 E-value=2.4e+02 Score=25.02 Aligned_cols=137 Identities=16% Similarity=0.062 Sum_probs=77.7
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHH-hcccccccceeeeeecCChhhHHHHHHHHHHcCCC
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK-AKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGIN 198 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 198 (535)
...+.+++......+..+|+-+++-. +. +....+..... .-+...-.+|..+. ...+....+.++.+ +.|++
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~--p~---~v~a~~~l~~~~~v~v~tvigFP~G~-~~~~~k~~e~~~Av-~~GAd 103 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT--PV---YTVKISGLAEKLGVKLCSVIGFPLGQ-APLEVKLVEAQTVL-EAGAT 103 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC--HH---HHHHHHHHHHHHTCCEEEEESTTTCC-SCHHHHHHHHHHHH-HHTCC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc--hH---HheeehHhCCCCCceEEEEeCCCCCC-CcHHHHHHHHHHHH-HcCCC
Confidence 45677888888889999999999832 21 12222222221 11111111221111 12233455666666 78999
Q ss_pred EEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCChhhHHHHHHHHHHH
Q 009410 199 SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRL 278 (535)
Q Consensus 199 ~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (535)
.+.+.++.......-.+.+.++.++++.+|+++-+=.+.... ..+.+.++.++
T Consensus 104 EID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------------------------~~e~i~~a~ri 156 (234)
T 1n7k_A 104 ELDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILEAPLW---------------------------DDKTLSLLVDS 156 (234)
T ss_dssp EEEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECCGGGS---------------------------CHHHHHHHHHH
T ss_pred EEEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEeccCC---------------------------CHHHHHHHHHH
Confidence 998876543221223566778888888888877555554321 02446777888
Q ss_pred HHhcCCCEEEEE
Q 009410 279 AEFVNTPLYVVH 290 (535)
Q Consensus 279 ~~~~~~~~~~~H 290 (535)
+.+.|..++-+-
T Consensus 157 a~eaGADfVKTs 168 (234)
T 1n7k_A 157 SRRAGADIVKTS 168 (234)
T ss_dssp HHHTTCSEEESC
T ss_pred HHHhCCCEEEeC
Confidence 888888775443
No 195
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=28.77 E-value=2.3e+02 Score=26.40 Aligned_cols=50 Identities=18% Similarity=0.320 Sum_probs=35.1
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cC--CCCcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YK--GSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~--~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
.++..++.++.|++.+-+... |. +.+.++.+.|+++-+. ..++++.|-.+
T Consensus 155 Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~---~~vpLVlHGgS 211 (305)
T 1rvg_A 155 PEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARL---VPAPLVLHGAS 211 (305)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHH---CCSCEEECSCC
T ss_pred HHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHh---cCCCEEEeCCC
Confidence 455666666789998876554 33 4566788888877764 46999999754
No 196
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=28.76 E-value=3.4e+02 Score=24.83 Aligned_cols=118 Identities=14% Similarity=0.060 Sum_probs=61.4
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCCh--hhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAENG--DAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~~--~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+ ...++.+++... ....+..+...+.|......-.
T Consensus 26 ~lv~~li-~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 26 KLIDYHV-ASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp HHHHHHH-HHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEEC
T ss_pred HHHHHHH-HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECC
Confidence 3333444 678988755433333456788887777776654 257898888543 3333333444555554432111
Q ss_pred ccCChhhHHHHHHHHH-HHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 261 LSRPPLLEGEATTRAI-RLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
...... ..+.+.+.. .++...+.++.+.+..... ..+.+.++.+
T Consensus 105 P~y~~~-s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 105 PYYNRP-SQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAK 153 (292)
T ss_dssp CCSSCC-CHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHT
T ss_pred CCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHc
Confidence 111011 123333333 3455667898887753211 1255666654
No 197
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=28.47 E-value=2e+02 Score=26.74 Aligned_cols=50 Identities=22% Similarity=0.240 Sum_probs=34.1
Q ss_pred HHHHHHHHHHcCCCEEEEEee-----cC--CCCcCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009410 185 SDEMEVMVKEKGINSFKFFMA-----YK--GSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~--~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 237 (535)
.++..++.++.|++.+-+... |. +.+.++.+.|+++- +..++|++.|-.+
T Consensus 157 Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~---~~~~~PLVlHGgS 213 (307)
T 3n9r_A 157 PKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVK---RLTNIPLVLHGAS 213 (307)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHH---HHHCSCEEESSCC
T ss_pred HHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHH---hcCCCCeEEeCCC
Confidence 455556666789998876554 22 33567899999882 2347999999754
No 198
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=28.46 E-value=3.5e+02 Score=24.80 Aligned_cols=110 Identities=8% Similarity=-0.013 Sum_probs=59.3
Q ss_pred CCCchhhhHHHHHHHHh-CCcEEEeccccCCCC---Ch---HHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALA-GGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVM 191 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~-~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 191 (535)
|..+.+.+.......+. +||..+.-++..+.. +. .+.++...+.... +.....+....+ .+..+..+.
T Consensus 19 g~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~- 94 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKD---QIALIAQVGSVNLKEAVELGKY- 94 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT---SSEEEEECCCSCHHHHHHHHHH-
T ss_pred CCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCC---CCeEEEecCCCCHHHHHHHHHH-
Confidence 45666777777788889 999998755443332 22 2222332222211 223333333323 344443333
Q ss_pred HHHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
+++.|++++-+..-+. ...+.+.+.+-++ .|...++|+..+-
T Consensus 95 a~~~Gadavlv~~P~y--~~~~~~~l~~~f~~va~a~~lPiilYn 137 (293)
T 1f6k_A 95 ATELGYDCLSAVTPFY--YKFSFPEIKHYYDTIIAETGSNMIVYS 137 (293)
T ss_dssp HHHHTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 4478999987654332 2345666555554 3555688988764
No 199
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=28.30 E-value=1.2e+02 Score=29.08 Aligned_cols=32 Identities=6% Similarity=0.095 Sum_probs=24.2
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 394 MHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 394 l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
++.+...+.+ .|+|.+++-+.+-.|.-++|..
T Consensus 305 ~p~l~~~L~~-~G~se~~i~ki~g~N~lRvl~~ 336 (369)
T 1itu_A 305 YPDLIAELLR-RNWTEAEVKGALADNLLRVFEA 336 (369)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCHHHHHHHHhHhHHHHHHH
Confidence 4444444444 4699999999999999999874
No 200
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=28.00 E-value=3.5e+02 Score=24.76 Aligned_cols=117 Identities=11% Similarity=0.021 Sum_probs=64.6
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+ ...++.+++.. .....+..+...+.|......-.
T Consensus 25 ~lv~~li-~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 25 NLIEFHV-DNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHH-TTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHH-HCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3333444 678888755433333456788887777776664 25789999854 34444455566777776532111
Q ss_pred ccCChhhHHHHHH-HHHHHHHhcCCCEEEEEccCHH----HHHHHHHHH
Q 009410 261 LSRPPLLEGEATT-RAIRLAEFVNTPLYVVHVMSMD----AMEEIAKAR 304 (535)
Q Consensus 261 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~ 304 (535)
....... .+.+. ..-.++...+.++.+.+..... ..+.+.++.
T Consensus 104 P~y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 104 PYYNKPT-QRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp CCSSCCC-HHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred CCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 1111112 23333 3334566668899888853221 125566665
No 201
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=27.89 E-value=3.7e+02 Score=24.97 Aligned_cols=111 Identities=14% Similarity=0.070 Sum_probs=56.1
Q ss_pred HcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCC-hhhHHHHHHHHHHcCCCCcccccccCChhhHH
Q 009410 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (535)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 269 (535)
+.|++++-+..+......++.++-.++++.+.+. .+++.+++.. .....+..+.+.+.|......-........+.
T Consensus 44 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~ 123 (316)
T 3e96_A 44 DNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIHPYVTAG 123 (316)
T ss_dssp TTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHH
T ss_pred HcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHH
Confidence 6777776433222234567777777777666543 5788888743 22233333455666765432111111111222
Q ss_pred HHHHHHHHHHHhcCCCEEEEEc-cCHHHHHHHHHHHH
Q 009410 270 EATTRAIRLAEFVNTPLYVVHV-MSMDAMEEIAKARK 305 (535)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~ 305 (535)
.-+...-.++...+.|+.+.+. ..... +.+.++++
T Consensus 124 ~l~~~f~~va~a~~lPiilYn~g~~l~~-~~~~~La~ 159 (316)
T 3e96_A 124 GVYAYFRDIIEALDFPSLVYFKDPEISD-RVLVDLAP 159 (316)
T ss_dssp HHHHHHHHHHHHHTSCEEEEECCTTSCT-HHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCCH-HHHHHHHc
Confidence 2223333345556789888874 22222 55666653
No 202
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=27.60 E-value=3.9e+02 Score=25.07 Aligned_cols=118 Identities=12% Similarity=0.040 Sum_probs=65.0
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.++ +.|++++-+..+......++.++-.++++.+.+. .+++.+++.. .....+..+.+.+.|......-.
T Consensus 59 ~lv~~li-~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 59 ALIARLD-AAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAP 137 (332)
T ss_dssp HHHHHHH-HHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3344444 6899998654333344567888877777766643 5789888844 34444455566777876532111
Q ss_pred ccCChhhHHHHHHHH-HHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 261 LSRPPLLEGEATTRA-IRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 261 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
....... .+.+.+. -.++...+.++.+.+..... ..+.+.++.+
T Consensus 138 P~Y~~~s-~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~ 186 (332)
T 2r8w_A 138 VSYTPLT-QEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAY 186 (332)
T ss_dssp CCSSCCC-HHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHT
T ss_pred CCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 1111111 2233333 34466668899887753211 1256666654
No 203
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=27.36 E-value=3.2e+02 Score=24.65 Aligned_cols=62 Identities=11% Similarity=-0.008 Sum_probs=43.4
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCCh--hhHHHHHHHHHHcCCCCcc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG--DAVFEGQKRMIELGITGPE 257 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~--~~~~~~~~~~~~~g~~~~~ 257 (535)
++.|++++-+-.-.. ...++.+.++++++.|+ ++++..|-.-+ ......++.+.+.|+..+.
T Consensus 83 ~~~GadGvV~G~Lt~-dg~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~lG~~rIL 146 (256)
T 1twd_A 83 RELGFPGLVTGVLDV-DGNVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAELGIARVL 146 (256)
T ss_dssp HHTTCSEEEECCBCT-TSSBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHHTCCEEE
T ss_pred HHcCCCEEEEeeECC-CCCcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHcCCCEEE
Confidence 478999986532211 23578999999998886 78999996322 2345667788888887654
No 204
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=27.35 E-value=3.5e+02 Score=24.72 Aligned_cols=117 Identities=9% Similarity=0.033 Sum_probs=63.0
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc
Q 009410 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
.++.+. +.|++++-+..+......++.++-.++++.+.+ ...++.+++.. .....+..+...+.|......-..
T Consensus 27 lv~~li-~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 27 LIEWHI-KSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHH-HTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 333444 688888765433334456788887777776654 35789888854 334444555667777765321111
Q ss_pred cCChhhHHHHHHHHH-HHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 262 SRPPLLEGEATTRAI-RLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
..... ..+.+.+.. .++...+.++.+.+..... ..+.+.++.+
T Consensus 106 ~y~~~-s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (291)
T 3a5f_A 106 YYNKT-TQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCE 153 (291)
T ss_dssp CSSCC-CHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTT
T ss_pred CCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 11111 123333333 3455567888887753221 1255555553
No 205
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=27.11 E-value=3.8e+02 Score=24.77 Aligned_cols=116 Identities=16% Similarity=0.059 Sum_probs=62.9
Q ss_pred HHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc
Q 009410 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
.++.+. +.|++++-+..+......++.++-.++++.+.+ ..+++.+++.. .....+..+.+.+.|......-..
T Consensus 38 lv~~li-~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 38 LVRYQL-ENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHH-HTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHH-HcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 333444 678888755433334456788777777776654 25788888844 344444555666777765321111
Q ss_pred cCChhhHHHHHHHHH-HHHHhcCCCEEEEEccCHH----HHHHHHHHH
Q 009410 262 SRPPLLEGEATTRAI-RLAEFVNTPLYVVHVMSMD----AMEEIAKAR 304 (535)
Q Consensus 262 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~H~~~~~----~~~~~~~~~ 304 (535)
...... .+.+.+.. .++...+.|+.+.+..... ..+.+.++.
T Consensus 117 ~y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 117 YYNKPT-QEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp CSSCCC-HHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred CCCCCC-HHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 111111 23333333 3455667899888753211 125566665
No 206
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=26.65 E-value=3.7e+02 Score=24.54 Aligned_cols=117 Identities=12% Similarity=0.067 Sum_probs=65.0
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+ ...++.+++.. .....+..+...+.|......-.
T Consensus 25 ~lv~~li-~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 25 ENINFLI-ENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHH-HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHH-HCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3344444 789998765433334466788887777776654 25789999854 34444455666777876532111
Q ss_pred ccCChhhHHHHHH-HHHHHHHhcCCCEEEEEccCHH----HHHHHHHHH
Q 009410 261 LSRPPLLEGEATT-RAIRLAEFVNTPLYVVHVMSMD----AMEEIAKAR 304 (535)
Q Consensus 261 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~ 304 (535)
....... .+.+. ..-.++...+.++.+.+..... ..+.+.++.
T Consensus 104 P~y~~~s-~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 104 PYYNKPT-QEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp CCSSCCC-HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred CCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 1111111 23333 3334566668899888863221 125566665
No 207
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=26.55 E-value=3.8e+02 Score=24.66 Aligned_cols=116 Identities=12% Similarity=0.105 Sum_probs=62.9
Q ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccccc
Q 009410 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
++.+. +.|++++-+..+......++.++-.++++.+.+ ..+++.+++.. .....+..+.+.+.|......-...
T Consensus 39 v~~li-~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 117 (301)
T 1xky_A 39 VNYLI-DNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPY 117 (301)
T ss_dssp HHHHH-HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 33344 678888755433333456788887777776654 25788888844 3444445556677777653211111
Q ss_pred CChhhHHHHHHHH-HHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 263 RPPLLEGEATTRA-IRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 263 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
..... .+.+.+. -.++...+.++.+.+..... ..+.+.++.+
T Consensus 118 y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (301)
T 1xky_A 118 YNKPS-QEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSE 164 (301)
T ss_dssp SSCCC-HHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred CCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 11111 2333333 34456668899888753211 1255666654
No 208
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=26.25 E-value=4.2e+02 Score=25.00 Aligned_cols=115 Identities=9% Similarity=0.030 Sum_probs=62.7
Q ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccccc
Q 009410 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
++.++ +.|++++-+..+......++.++-.++++.+.+ ..+++.+++.. .....+..+.+.+.|......-...
T Consensus 58 v~~li-~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 136 (343)
T 2v9d_A 58 IDDLI-KAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPY 136 (343)
T ss_dssp HHHHH-HTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCS
T ss_pred HHHHH-HcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 33444 678888755433333456788777777776654 35788888843 3444455556677777653211111
Q ss_pred CChhhHHHHHHHH-HHHHHhcCCCEEEEEccCHH----HHHHHHHHH
Q 009410 263 RPPLLEGEATTRA-IRLAEFVNTPLYVVHVMSMD----AMEEIAKAR 304 (535)
Q Consensus 263 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~ 304 (535)
..... .+.+.+. -.++...+.++.+.+..... ..+.+.+++
T Consensus 137 Y~~~s-~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 137 YWKVS-EANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp SSCCC-HHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred CCCCC-HHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 11111 2333333 34466668899888863211 125566665
No 209
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=25.54 E-value=5.4e+02 Score=26.06 Aligned_cols=126 Identities=10% Similarity=0.049 Sum_probs=63.1
Q ss_pred hHHHHHHHHhCCcEEEeccccCCCC-ChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEEEEee
Q 009410 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (535)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (535)
.......++.+|+..++-.....+. .....++.....+......+.+..+ ...+.+..-++.+.+.+.|++.+.+- +
T Consensus 119 ~~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~-~~~~~e~~~~~a~~l~~~Gad~I~L~-D 196 (539)
T 1rqb_A 119 VDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTIS-PVHTVEGYVKLAGQLLDMGADSIALK-D 196 (539)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCS-TTCCHHHHHHHHHHHHHTTCSEEEEE-E
T ss_pred cHHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeC-CCCCHHHHHHHHHHHHHcCCCEEEeC-C
Confidence 3445677888999877633222221 3333344333333221111111111 11233333333333347899887653 3
Q ss_pred cCCCCcCCHHHHHHHHHHHHh-c--CCeEEEEcCChhh-HHHHHHHHHHcCCCCc
Q 009410 206 YKGSFMINDELLIEGFKRCKS-L--GALAMVHAENGDA-VFEGQKRMIELGITGP 256 (535)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~-~--g~~v~~H~~~~~~-~~~~~~~~~~~g~~~~ 256 (535)
-.| ..++..+.+++...++ . ++++.+|+.++.. .....-.....|...+
T Consensus 197 T~G--~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~V 249 (539)
T 1rqb_A 197 MAA--LLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVV 249 (539)
T ss_dssp TTC--CCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEE
T ss_pred CCC--CcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCEE
Confidence 333 3467888888777664 3 6889999865532 2222334455666543
No 210
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=25.37 E-value=4.1e+02 Score=24.61 Aligned_cols=108 Identities=10% Similarity=-0.007 Sum_probs=59.5
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChH---HHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHH
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (535)
|..+.+.+.......+.+||..++-.+..+.. +.. +.++...+.. -+.....+....+ .+..+.. +.+
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~----grvpViaGvg~~~t~~ai~la-~~A 98 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA----KSMQVIVGVSAPGFAAMRRLA-RLS 98 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC----TTSEEEEECCCSSHHHHHHHH-HHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc----CCCcEEEecCCCCHHHHHHHH-HHH
Confidence 45666777777888899999998865443332 222 2222222222 2333333343333 3444444 344
Q ss_pred HHcCCCEEEEEeecCCCCcCCHHHHHHHHH-HHHhcC--CeEEEEc
Q 009410 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLG--ALAMVHA 235 (535)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g--~~v~~H~ 235 (535)
++.|++++-+..-| +..+.+.+.+-++ .|...+ +|+...-
T Consensus 99 ~~~Gadavlv~~P~---~~~s~~~l~~~f~~va~a~~~~lPiilYn 141 (313)
T 3dz1_A 99 MDAGAAGVMIAPPP---SLRTDEQITTYFRQATEAIGDDVPWVLQD 141 (313)
T ss_dssp HHHTCSEEEECCCT---TCCSHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred HHcCCCEEEECCCC---CCCCHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 47899998764333 2246666655554 444556 8988763
No 211
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=24.92 E-value=4e+02 Score=24.37 Aligned_cols=117 Identities=7% Similarity=-0.009 Sum_probs=64.7
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+. ..++.+++.. .....+..+.+.+.|......-.
T Consensus 28 ~lv~~li-~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 28 AHARRCL-SNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAP 106 (294)
T ss_dssp HHHHHHH-HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3333444 6789887554333334668888888888877753 4678888844 34444455566777775532111
Q ss_pred ccCCh-hhHHHHHHHH-HHHHHhc---CCCEEEEEccCHH----HHHHHHHHH
Q 009410 261 LSRPP-LLEGEATTRA-IRLAEFV---NTPLYVVHVMSMD----AMEEIAKAR 304 (535)
Q Consensus 261 ~~~~~-~~~~~~~~~~-~~~~~~~---~~~~~~~H~~~~~----~~~~~~~~~ 304 (535)
..... .. .+.+.+. -.++... +.++.+.+..... ..+.+.++.
T Consensus 107 P~y~~~~s-~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 107 PSYFKNVS-DDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp CCSSCSCC-HHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred CcCCCCCC-HHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 11111 11 2333333 3445666 7899888863211 125566665
No 212
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=24.85 E-value=4.1e+02 Score=24.40 Aligned_cols=118 Identities=9% Similarity=-0.029 Sum_probs=64.3
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+ ..+++.+++.. .....+..+...+.|......-.
T Consensus 25 ~lv~~li-~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 25 GLVDWQI-KHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp HHHHHHH-HTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHH-HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3344444 688988755433333456788887777776654 25788888844 33444455566777775532111
Q ss_pred ccCChhhHHHHHHH-HHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 261 LSRPPLLEGEATTR-AIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 261 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
....... .+.+.+ .-.++...+.++.+.+..... ..+.+.++.+
T Consensus 104 P~y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (297)
T 2rfg_A 104 GYYNRPS-QEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAA 152 (297)
T ss_dssp CTTTCCC-HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred CCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 1110111 233333 334566668899888753221 1256666654
No 213
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=24.69 E-value=4.1e+02 Score=24.44 Aligned_cols=118 Identities=12% Similarity=0.050 Sum_probs=64.5
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHA 260 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~ 260 (535)
+.++.+. +.|++++-+..+......++.++-.++++.+.+ ..+++.+++.. .....+..+.+.+.|......-.
T Consensus 41 ~lv~~li-~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 41 EVAAYLV-DKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHH-HTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3333444 678888755433334456788887777776664 35789888844 34444555566777776532111
Q ss_pred ccCChhhHHHHHH-HHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 261 LSRPPLLEGEATT-RAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 261 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
....... .+.+. ..-.++...+.|+.+.+..... ..+.+.++.+
T Consensus 120 P~y~~~~-~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (304)
T 3cpr_A 120 PYYSKPS-QEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLSE 168 (304)
T ss_dssp CCSSCCC-HHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred CCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 1111111 23333 3334566668899888863211 1255655553
No 214
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=24.56 E-value=4.1e+02 Score=24.31 Aligned_cols=118 Identities=12% Similarity=0.022 Sum_probs=64.3
Q ss_pred HHHHHHHHH-cCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccc
Q 009410 186 DEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGH 259 (535)
Q Consensus 186 ~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~ 259 (535)
+.++.+. + .|++++-+..+......++.++-.++++.+.+ ..+++.+++.. .....+..+...+.|......-
T Consensus 28 ~lv~~li-~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 106 (293)
T 1f6k_A 28 QIIRHNI-DKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAV 106 (293)
T ss_dssp HHHHHHH-HTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHH-hhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 3344444 6 78988765433334466788887777776654 35789888844 3444445556677787653211
Q ss_pred cccCChhhHHHHHH-HHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHH
Q 009410 260 ALSRPPLLEGEATT-RAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 260 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
........ .+.+. ..-.++...+.++.+.+..... ..+.+.++.+
T Consensus 107 ~P~y~~~~-~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 156 (293)
T 1f6k_A 107 TPFYYKFS-FPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYK 156 (293)
T ss_dssp CCCSSCCC-HHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred CCCCCCCC-HHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhc
Confidence 11111111 22333 2233455667899888753211 1255666654
No 215
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=24.54 E-value=4.2e+02 Score=24.50 Aligned_cols=117 Identities=10% Similarity=-0.034 Sum_probs=66.0
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc--CCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL 261 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~ 261 (535)
+.++.++ +.|++++-+..+......++.++-.++++.+.+. .+++.+++.. .....+..+.+.+.|......-..
T Consensus 33 ~lv~~li-~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 33 RLTDFYA-EVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHHH-HTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHH-HCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 3334444 6899988554333344667888877777766654 5789989843 344445556667777755321111
Q ss_pred cCChhhHHHHHHH-HHHHHHhcC--CCEEEEEccCHH----HHHHHHHHHH
Q 009410 262 SRPPLLEGEATTR-AIRLAEFVN--TPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 262 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
... . ..+.+.+ .-.++...+ .++.+.+..... ..+.+.++++
T Consensus 112 ~~~-~-s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (313)
T 3dz1_A 112 PSL-R-TDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVM 160 (313)
T ss_dssp TTC-C-SHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHH
T ss_pred CCC-C-CHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHH
Confidence 111 1 1233333 333455566 899988863211 1266777764
No 216
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=24.23 E-value=2.8e+02 Score=26.50 Aligned_cols=57 Identities=11% Similarity=0.006 Sum_probs=34.8
Q ss_pred cCCe-EEEeCCCCCCChhhhhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 358 TGIL-QLVGTDHCAFNSTQKAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 358 ~Gv~-~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
.|+. +.||||.-...... .+.+ ...++.+...+.+. |+|.+++-+.+-.|.-|+|..
T Consensus 296 ~G~dhVgiGsDfdG~~~p~------gl~d-----~s~~p~L~~~L~~r-G~se~~i~ki~g~N~lRvl~~ 353 (364)
T 3ly0_A 296 LGEDHVGMGSDFDGATIPQ------GIAD-----VTGLPALQAAMRAH-GYDEPLMRKLCHENWYGLLER 353 (364)
T ss_dssp HCTTSEEECCCBTTSCCCT------TTCS-----GGGHHHHHHHHHHH-TCCHHHHHHHHTHHHHHHHHH
T ss_pred cCCCeEEECCCCCCCCCCC------CCCC-----HHHHHHHHHHHHHC-CCCHHHHHHHHhHhHHHHHHH
Confidence 3653 99999954321110 1111 11344445444444 699999999999999888864
No 217
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=24.15 E-value=4.2e+02 Score=24.36 Aligned_cols=97 Identities=14% Similarity=0.045 Sum_probs=57.5
Q ss_pred hhhHHHHHHHHHHcCCCEEEEEeec--CCCCcCC-HHHHHHHHHHHHh---cCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009410 182 EVVSDEMEVMVKEKGINSFKFFMAY--KGSFMIN-DELLIEGFKRCKS---LGALAMVHAENGDAVFEGQKRMIELGITG 255 (535)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~--~~~~~~~-~~~l~~~~~~a~~---~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (535)
+...+...++. +.|++.+-+-... +|....+ .+++++++...+. .+.++++-......+...++. |..-
T Consensus 46 ~~a~~~a~~~v-~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT~~~~Va~aAl~a----Ga~i 120 (294)
T 2y5s_A 46 DDALRRAERMI-AEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDTYKPAVMRAALAA----GADL 120 (294)
T ss_dssp THHHHHHHHHH-HTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEECCCHHHHHHHHHH----TCSE
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHc----CCCE
Confidence 34555556666 7899999875432 2323333 5556555544443 388999888877666555543 5432
Q ss_pred cccccccCChhhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
+..-... . ..+.+.++.+++.++++.|.
T Consensus 121 INdVsg~-------~-d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 121 INDIWGF-------R-QPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp EEETTTT-------C-STTHHHHHSSSSCEEEEECC
T ss_pred EEECCCC-------C-chHHHHHHHHhCCCEEEECC
Confidence 2111111 0 22466778889999999996
No 218
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=24.09 E-value=4.3e+02 Score=24.44 Aligned_cols=119 Identities=10% Similarity=0.085 Sum_probs=65.1
Q ss_pred HHHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCC-CCccc
Q 009410 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGI-TGPEG 258 (535)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~-~~~~~ 258 (535)
.+.++.+. +.|++++-+..+......++.++-.++++.+.+. ..++.+++.. .....+..+.+.+.|. .....
T Consensus 31 ~~lv~~li-~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv 109 (311)
T 3h5d_A 31 PALIEHLL-AHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLA 109 (311)
T ss_dssp HHHHHHHH-HTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEE
T ss_pred HHHHHHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEE
Confidence 33444444 7888887654443445667888888888777654 5788888844 3344444456666664 43211
Q ss_pred ccc--cCChhhHHHHHHHHHHHHHhcCCCEEEEEccCHH----HHHHHHHHHHc
Q 009410 259 HAL--SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (535)
Q Consensus 259 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~ 306 (535)
... ..|. +..-+...-.++...+.++.+.+..... ..+.+.++++.
T Consensus 110 ~~P~y~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 161 (311)
T 3h5d_A 110 IVPYYNKPS--QEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADH 161 (311)
T ss_dssp ECCCSSCCC--HHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTS
T ss_pred cCCCCCCCC--HHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC
Confidence 111 1121 2222333334455668899888863211 12556666643
No 219
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=24.00 E-value=4.3e+02 Score=24.43 Aligned_cols=113 Identities=14% Similarity=-0.010 Sum_probs=58.6
Q ss_pred CCCchhhhHHHHHHHHhCCcEEEeccccCCCC---ChHHHHHHHHHHhcccccccceeeeeecCC-hhhHHHHHHHHHHc
Q 009410 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMVKEK 195 (535)
Q Consensus 120 g~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 195 (535)
|..+.+.+.......+.+||..+.-++..+.. +..+..+..........-+.....+....+ .+..+.. +.+++.
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la-~~A~~~ 101 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFV-KEVAEF 101 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHH-HHHHHS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHH-HHHHhc
Confidence 45666777777888889999988866544433 222222222221111111233333333322 3344333 334366
Q ss_pred CC-CEEEEEeecCCCCcCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009410 196 GI-NSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (535)
Q Consensus 196 g~-~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (535)
|+ +++-+..-+. ...+.+.+.+.++ .|...++|+..+-
T Consensus 102 Ga~davlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 141 (311)
T 3h5d_A 102 GGFAAGLAIVPYY--NKPSQEGMYQHFKAIADASDLPIIIYN 141 (311)
T ss_dssp CCCSEEEEECCCS--SCCCHHHHHHHHHHHHHSCSSCEEEEE
T ss_pred CCCcEEEEcCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 76 8886643332 2345665555554 4455689988764
No 220
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=23.82 E-value=4.3e+02 Score=24.32 Aligned_cols=116 Identities=9% Similarity=0.056 Sum_probs=62.2
Q ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccccccc
Q 009410 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALS 262 (535)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (535)
++.+. +.|++++-+..+......++.++-.++++.+.+ ..+++.+++.. .....+..+.+.+.|......-...
T Consensus 38 v~~li-~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 116 (303)
T 2wkj_A 38 VQFNI-QQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPF 116 (303)
T ss_dssp HHHHH-HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHH-HcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCC
Confidence 33444 678888755433333456788877777776654 35789888854 3344445556677777653211111
Q ss_pred CChhhHHHHHHHHH-HHHHhcC-CCEEEEEccCHH----HHHHHHHHHH
Q 009410 263 RPPLLEGEATTRAI-RLAEFVN-TPLYVVHVMSMD----AMEEIAKARK 305 (535)
Q Consensus 263 ~~~~~~~~~~~~~~-~~~~~~~-~~~~~~H~~~~~----~~~~~~~~~~ 305 (535)
..... .+.+.+.+ .++...+ .++.+.+..... ..+.+.++.+
T Consensus 117 y~~~s-~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (303)
T 2wkj_A 117 YYPFS-FEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVT 164 (303)
T ss_dssp SSCCC-HHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred CCCCC-HHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 11111 23333332 3455556 899888753211 1255666654
No 221
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=23.71 E-value=2.2e+02 Score=25.25 Aligned_cols=81 Identities=9% Similarity=-0.043 Sum_probs=46.2
Q ss_pred HHHHHcCCCEEEEE-eecCCCCcCCHHHHHHHHHHHHhcCCeEE-EEcCCh-h-hHHHHHHHHHHcCCCCcccccccCCh
Q 009410 190 VMVKEKGINSFKFF-MAYKGSFMINDELLIEGFKRCKSLGALAM-VHAENG-D-AVFEGQKRMIELGITGPEGHALSRPP 265 (535)
Q Consensus 190 ~~~~~~g~~~ik~~-~~~~~~~~~~~~~l~~~~~~a~~~g~~v~-~H~~~~-~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 265 (535)
+.+++.|.+++-+. ..... ...+...+.++.+.++++|+.+. +|.... . ......
T Consensus 21 ~~~~~~G~~~vEl~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~-------------------- 79 (278)
T 1i60_A 21 ELCEKHGYDYIEIRTMDKLP-EYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGH-------------------- 79 (278)
T ss_dssp HHHHHTTCSEEEEETTTHHH-HHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHH--------------------
T ss_pred HHHHHhCCCEEEEccHHHHH-HHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHH--------------------
Confidence 33447899998876 33210 01122445667777788899876 665320 0 000000
Q ss_pred hhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009410 266 LLEGEATTRAIRLAEFVNTPLYVVHV 291 (535)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~H~ 291 (535)
....+.+.+.++++...|.+....|.
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~~ 105 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVAVP 105 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 11134577888888999988877764
No 222
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=22.90 E-value=2.6e+02 Score=24.71 Aligned_cols=105 Identities=15% Similarity=0.152 Sum_probs=58.4
Q ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCC-
Q 009410 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRP- 264 (535)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~- 264 (535)
+.++. +++.|.+++-++... .+...+.++.+..+++|+.+..+..... +.+ ..+
T Consensus 22 ~~l~~-~~~~G~~~vEl~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~-------------~~~------~d~~ 76 (275)
T 3qc0_A 22 EAVDI-CLKHGITAIAPWRDQ-----VAAIGLGEAGRIVRANGLKLTGLCRGGF-------------FPA------PDAS 76 (275)
T ss_dssp HHHHH-HHHTTCCEEECBHHH-----HHHHCHHHHHHHHHHHTCEESCEEEEEC-------------CCC------SSHH
T ss_pred HHHHH-HHHcCCCEEEecccc-----ccccCHHHHHHHHHHcCCceEEeecCCC-------------cCC------CCHH
Confidence 34444 447899988765321 1345567777778888988765542100 000 000
Q ss_pred -hhhHHHHHHHHHHHHHhcCCCEEEEEccCH---------------HHH-HHHHHHHHcCCcEEeccc
Q 009410 265 -PLLEGEATTRAIRLAEFVNTPLYVVHVMSM---------------DAM-EEIAKARKAGQRVIGEPV 315 (535)
Q Consensus 265 -~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~---------------~~~-~~~~~~~~~g~~v~~~~~ 315 (535)
.....+.+.+.++++...|.+....|.... +.+ +..+.+++.|+.+..++.
T Consensus 77 ~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~ 144 (275)
T 3qc0_A 77 GREKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPL 144 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeEC
Confidence 011134577888888888888777775210 111 223334567888887753
No 223
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=22.77 E-value=45 Score=30.15 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=24.4
Q ss_pred ccccccccccccCCCCchhhhHHHHHHHHhCCcEEEe
Q 009410 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (535)
Q Consensus 107 lID~H~H~~~~~~g~~~~~~~~~~~~~~l~~GvTtv~ 143 (535)
++|.|+|...+ .|..+++++ .+.+.+.|++.+.
T Consensus 21 ~~DlH~Ht~~S-Dg~~t~ee~---v~~A~~~Gl~~i~ 53 (255)
T 2anu_A 21 LCDFHVHTNMS-DGHLPLGEV---VDLFGKHGVDVVS 53 (255)
T ss_dssp EEEEEECCTTT-TCSSCHHHH---HHHHHHTTCSEEE
T ss_pred EEEEeecCCCc-CCCCCHHHH---HHHHHHCCCCEEE
Confidence 69999998765 455555554 6777888998764
No 224
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=22.62 E-value=2.4e+02 Score=24.75 Aligned_cols=98 Identities=13% Similarity=0.125 Sum_probs=56.9
Q ss_pred CchhhhHHHHHHHHhCCcEEEeccccCCCCChHHHHHHHHHHhcccccccceeeeeecCChhhHHHHHHHHHHcCCCEEE
Q 009410 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (535)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik 201 (535)
.++++.....++++..|++.+--.. . .....+.++...+..+...+.. .+-.+ .+..+... +.|++++-
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~-~-t~~a~~~I~~l~~~~p~~~IGA-----GTVlt---~~~a~~ai-~AGA~fiv 90 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTL-R-TEAGLAAISAIKKAVPEAIVGA-----GTVCT---ADDFQKAI-DAGAQFIV 90 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEET-T-STTHHHHHHHHHHHCTTSEEEE-----ECCCS---HHHHHHHH-HHTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeC-C-CccHHHHHHHHHHHCCCCeEee-----ccccC---HHHHHHHH-HcCCCEEE
Confidence 4566666778888999999765221 1 1235666666665544322211 12122 34555555 78998883
Q ss_pred EEeecCCCCcCCHHHHHHHHHHHHhcCC------eEEEEcCChhhH
Q 009410 202 FFMAYKGSFMINDELLIEGFKRCKSLGA------LAMVHAENGDAV 241 (535)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~------~v~~H~~~~~~~ 241 (535)
+ +..+++ +++.|+++++ ++..-+.+..++
T Consensus 91 ---s----P~~~~e----vi~~~~~~~v~~~~~~~~~PG~~TptE~ 125 (217)
T 3lab_A 91 ---S----PGLTPE----LIEKAKQVKLDGQWQGVFLPGVATASEV 125 (217)
T ss_dssp ---E----SSCCHH----HHHHHHHHHHHCSCCCEEEEEECSHHHH
T ss_pred ---e----CCCcHH----HHHHHHHcCCCccCCCeEeCCCCCHHHH
Confidence 2 223444 5566777788 887777666544
No 225
>3fy3_A Hemolysin; beta helix, solenoid, two partner secretion, cell membrane, cell outer membrane, cytolysis, hemolysis, membra; 1.80A {Proteus mirabilis}
Probab=21.98 E-value=1.1e+02 Score=27.32 Aligned_cols=50 Identities=22% Similarity=0.346 Sum_probs=36.1
Q ss_pred cccc-CCCCccEEEEcCCCceeeecCCccccCCCCCCCCeeEeeEEEEEEECCEEEEECCeecccC
Q 009410 431 GAIL-VGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 495 (535)
Q Consensus 431 GsI~-~Gk~ADlvvld~~~~~~i~~~~~~~~~~~~p~~~~~~~~~v~~v~~~Gr~V~~~~~~~~~~ 495 (535)
|.+| .|++||+|+-.++-. -..|..+..-.+.+..=|+..+++|.+..++
T Consensus 94 G~lEVaG~~AdvIiANPnGI---------------tcnGcgFiNt~~~TLtTG~p~~~~G~l~~~~ 144 (236)
T 3fy3_A 94 GQQEVFGIAAEYVLSNPNGI---------------TCDGCGFINTSRSSLVVGNPLFENGQLKGYS 144 (236)
T ss_dssp SEEEEEESCEEEEEECTTCE---------------EESSEEEESEEEEEEESSEEEEETTEEEEEE
T ss_pred cEEEEcCCCCCEEEECCCCE---------------EEeCcEEEccCCeEEEEeeEEecCCceeEEE
Confidence 5566 489999999986632 2334444456677899999999999887654
No 226
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=20.85 E-value=29 Score=31.69 Aligned_cols=10 Identities=30% Similarity=0.534 Sum_probs=5.9
Q ss_pred EEEEEeecCC
Q 009410 199 SFKFFMAYKG 208 (535)
Q Consensus 199 ~ik~~~~~~~ 208 (535)
.+|+|..+.+
T Consensus 139 rIKLFyRP~~ 148 (257)
T 3q48_A 139 RFKLFFRPSQ 148 (257)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEeccc
Confidence 4677666544
No 227
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=20.68 E-value=4.5e+02 Score=25.62 Aligned_cols=32 Identities=16% Similarity=0.157 Sum_probs=23.4
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHhHHHHHHcCC
Q 009410 394 MHLVWDTMVESGQISVTDYVRLTSTECARIFNV 426 (535)
Q Consensus 394 l~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 426 (535)
++.+...+.+. |+|.+++=+.+-.|.-|+|..
T Consensus 375 ~p~l~~~L~~r-G~se~di~ki~ggN~lRVl~~ 406 (417)
T 3b40_A 375 IRNVTAELITR-GYSDADIAKLWGGNFLRAWGE 406 (417)
T ss_dssp HHHHHHHHHHH-TCCHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHH
Confidence 44445444444 599999999999999888763
No 228
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=20.01 E-value=2.4e+02 Score=28.33 Aligned_cols=172 Identities=13% Similarity=0.048 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHH-HHHcCCCCcccccccCChhhHHHHHHHHHHHHHhcC-CCEEEEEc
Q 009410 215 ELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKR-MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN-TPLYVVHV 291 (535)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~H~ 291 (535)
..+..+...+.+.|++...|.... +......+. -.+.|..++...... ..+...++.....+ .++++.|+
T Consensus 290 ~ll~~l~~~~~e~gw~mQlH~Ga~Rn~n~~m~~~~G~d~G~D~~~~~~~a-------~~L~~lL~~l~~~~~pktILy~L 362 (497)
T 2q01_A 290 QMLTEMAKMSLDDGLVMQIHPGSHRNHNVGLLNSHGRDKGADIPMRTEYV-------DALKPLLTRLGNDPRLSIILFTL 362 (497)
T ss_dssp HHHHHHHHHHHHHCCEEEECCCEECCCCHHHHHHTCSSSSCCEECCCCCT-------TTSHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHHHHHHHhcCCcEEEeeccCCCCCHHHHHHcCCCCCCCCCCchHHH-------HHHHHHHHHHhhcCCCCeEEEeC
Confidence 456667778888999999998331 000111111 011223222211111 11444555444444 78999898
Q ss_pred cCHH-HHHHHHHHHHcCCcEEeccccceEeeCc-ccccCcCccccceeEEcCCCCCcccHHHHHHHHhc---CCeEEEeC
Q 009410 292 MSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDD-SWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT---GILQLVGT 366 (535)
Q Consensus 292 ~~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~~---Gv~~~lgt 366 (535)
...+ . +.+..+... . + .++++. .++.+.. . .....+..+++. +-.+...|
T Consensus 363 np~~y~-~elatlag~-F-------p-kvq~G~~WWF~d~~----~-----------gm~~ql~~l~el~~lskfvGmlT 417 (497)
T 2q01_A 363 DETTYS-RELAPLAGH-Y-------P-VLKLGPSWWFHDSP----E-----------GMMRFREQVTETAGFYNTVGFND 417 (497)
T ss_dssp CTTHHH-HTHHHHHTT-C-------T-TEEECCCCGGGCSH----H-----------HHHHHHHHHHHHHCSTTBCCCCC
T ss_pred CcchhH-HHHHHHHcc-C-------C-ccccCCchhhccCh----H-----------HHHHHHHHHHHhhchhccccccc
Confidence 7754 3 445444421 1 1 222221 1111100 0 001234444443 33344778
Q ss_pred CCCCCChhh-hhcCCCCcccCcchHHHHHHHHHHHHHhcCCCCHHHHHHHHh----HHHHHHcCCCC
Q 009410 367 DHCAFNSTQ-KAFGIDDFRKIPNGIEERMHLVWDTMVESGQISVTDYVRLTS----TECARIFNVYP 428 (535)
Q Consensus 367 D~~~~~~~~-~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ls~~eal~~~T----~~~A~~lgl~~ 428 (535)
|+..+.... +.. -....+...+..++..+.+|.+||.+.+. .|+.++++++.
T Consensus 418 DsRsflSy~~Rhe----------yfRRiLc~vLg~~V~~~~lse~eA~r~a~~l~~~Na~r~Y~l~~ 474 (497)
T 2q01_A 418 DTRAFLSIPARHD----------VARRVDSAFLARMVAEHRMDLVEAEELIVDLTYNLPKKAYKLDQ 474 (497)
T ss_dssp CCSCGGGHHHHHH----------HHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHTTCCS
T ss_pred chhHhhhhhHHHH----------HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhHHHHhCCCC
Confidence 876553321 110 01223445555667889999999988766 58999999943
Done!