BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009412
(535 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2YIJ|A Chain A, Crystal Structure Of Phospholipase A1
pdb|2YIJ|B Chain B, Crystal Structure Of Phospholipase A1
Length = 419
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 159/416 (38%), Positives = 234/416 (56%), Gaps = 37/416 (8%)
Query: 86 KELHEMWKAIQGCNDWQGLLDPMNCHLRKEIIRYGEFSQACYDSFDFDPHSKYCGTCKYS 145
+E + W+ + G N W+G L P++ LR+ II YGE +QA YD+F+ + S++ G YS
Sbjct: 17 REFAKRWRDLSGQNHWKGXLQPLDQDLREYIIHYGEXAQAGYDTFNINTESQFAGASIYS 76
Query: 146 AASFFKK--LDMAD--SGYQISRYLYATSNINLPKFFQKSRLS-SVWSTYANWMGYIAVT 200
FF K L++A + Y++++++YATS+I++P+ F +S WS +NW GY+AVT
Sbjct: 77 RKDFFAKVGLEIAHPYTKYKVTKFIYATSDIHVPESFLLFPISREGWSKESNWXGYVAVT 136
Query: 201 TDEEEIKRLGRRDIVVAWRGTVTYIEWIYDLKDILHTAN--FGS-DPSIKIELGFHDLYT 257
D++ LGRRDIVV+WRG+V +EW+ D + L A FG + ++I G++ +Y
Sbjct: 137 -DDQGTALLGRRDIVVSWRGSVQPLEWVEDFEFGLVNAIKIFGERNDQVQIHQGWYSIYX 195
Query: 258 KKEQSCNYCTFSAREQVLAEIKRLIEYYEGEEISITFTGHSLGAALAIVSAYDVAELGLN 317
+++ + +AR+QVL E+ RL+E Y+ EE+SIT GHSLGAALA +SA D+ G N
Sbjct: 196 SQDERSPFTKTNARDQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDIVANGYN 255
Query: 318 IVNDGESSSSTKKIPITVYSFAGPRVGNLKFKERCDEL-GVKVLRVVNVHDKVPTVPGIL 376
S K P+T + FA PRVG+ F++ L ++VLR N+ D +P P
Sbjct: 256 ----RPKSRPDKSCPVTAFVFASPRVGDSDFRKLFSGLEDIRVLRTRNLPDVIPIYP--- 308
Query: 377 ANEKFQFQKHFEEATKFPWSYAHVGVELALDHTNSPFLKNTKDFGCAHNLEALLHLLDGY 436
P Y+ VG E +D SP+ K+ + H LE LH + G
Sbjct: 309 -----------------PIGYSEVGDEFPIDTRKSPYXKSPGNLATFHCLEGYLHGVAGT 351
Query: 437 CG--KENQFCLETTKRDIALVNKSCDFLKSEYEVPPHWRQDENKGMVRNTDGRWVL 490
G K + F L+ +R I LVNKS D LK E VP WR +NKG + DG W L
Sbjct: 352 QGTNKADLFRLD-VERAIGLVNKSVDGLKDECXVPGKWRVLKNKGXAQQDDGSWEL 406
>pdb|1DT3|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT3|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|E Chain E, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|F Chain F, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|G Chain G, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|H Chain H, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DU4|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1EIN|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1TIB|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|4DYH|A Chain A, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4DYH|B Chain B, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4EA6|A Chain A, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4EA6|B Chain B, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4FLF|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4FLF|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4GBG|A Chain A, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GBG|B Chain B, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GI1|A Chain A, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GI1|B Chain B, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GLB|A Chain A, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GLB|B Chain B, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GWL|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GWL|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GHW|A Chain A, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
pdb|4GHW|B Chain B, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
Length = 269
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 48/254 (18%)
Query: 121 EFSQACYDSFDFDPHSKYCGTCKYSAASFFKKLDMADSGYQISRYLYATSNINLPKFFQK 180
E SQ ++ F+ +YSAA++ K + A +G I T N +K
Sbjct: 1 EVSQDLFNQFNL--------FAQYSAAAYCGKNNDAPAGTNI------TCTGNACPEVEK 46
Query: 181 SRLSSVWSTYANWMGYIAVTTDEEEIKRLGRRDIVVAWRGTVTYIEWIYDLKDILHTANF 240
+ + ++S + +G + + +L IV+++RG+ + WI +L L N
Sbjct: 47 ADATFLYSFEDSGVGDVTGFLALDNTNKL----IVLSFRGSRSIENWIGNLNFDLKEIN- 101
Query: 241 GSDPSIKIELGFHDLYTKKEQSCNYCTFSAREQVLAEIKRLIEYYEGEEISITFTGHSLG 300
I HD +T +S + R++V ++ +Y + FTGHSLG
Sbjct: 102 ----DICSGCRGHDGFTSSWRSV---ADTLRQKVEDAVREHPDY------RVVFTGHSLG 148
Query: 301 AALAIVSAYDVAELGLNIVNDGESSSSTKKIPITVYSFAGPRVGNLKFKERCD-ELGVKV 359
ALA V+ D+ G + I V+S+ PRVGN F E + G +
Sbjct: 149 GALATVAGADLRGNGYD---------------IDVFSYGAPRVGNRAFAEFLTVQTGGTL 193
Query: 360 LRVVNVHDKVPTVP 373
R+ + +D VP +P
Sbjct: 194 YRITHTNDIVPRLP 207
>pdb|1GT6|A Chain A, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
pdb|1GT6|B Chain B, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
Length = 269
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 48/254 (18%)
Query: 121 EFSQACYDSFDFDPHSKYCGTCKYSAASFFKKLDMADSGYQISRYLYATSNINLPKFFQK 180
E SQ ++ F+ +YSAA++ K + A +G I T N +K
Sbjct: 1 EVSQDLFNQFNL--------FAQYSAAAYCGKNNDAPAGTNI------TCTGNACPEVEK 46
Query: 181 SRLSSVWSTYANWMGYIAVTTDEEEIKRLGRRDIVVAWRGTVTYIEWIYDLKDILHTANF 240
+ + ++S + +G + + +L IV+++RG+ + WI +L L N
Sbjct: 47 ADATFLYSFEDSGVGDVTGFLALDNTNKL----IVLSFRGSRSIENWIGNLNFDLKEIN- 101
Query: 241 GSDPSIKIELGFHDLYTKKEQSCNYCTFSAREQVLAEIKRLIEYYEGEEISITFTGHSLG 300
I HD +T +S + R++V ++ +Y + FTGH+LG
Sbjct: 102 ----DICSGCRGHDGFTSSWRSV---ADTLRQKVEDAVREHPDY------RVVFTGHALG 148
Query: 301 AALAIVSAYDVAELGLNIVNDGESSSSTKKIPITVYSFAGPRVGNLKFKERCD-ELGVKV 359
ALA V+ D+ G + I V+S+ PRVGN F E + G +
Sbjct: 149 GALATVAGADLRGNGYD---------------IDVFSYGAPRVGNRAFAEFLTVQTGGTL 193
Query: 360 LRVVNVHDKVPTVP 373
R+ + +D VP +P
Sbjct: 194 YRITHTNDIVPRLP 207
>pdb|4TGL|A Chain A, Catalysis At The Interface: The Anatomy Of A
Conformational Change In A Triglyceride Lipase
Length = 269
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 212 RDIVVAWRGTVTYIEWIYDLKDILHTANFGSDPSIKIELGFHDLYTKKEQSCNYCTFSAR 271
+ I + +RG+ + WI DL + ++ K+ GF D Y + +
Sbjct: 73 KTIYIVFRGSSSIRNWIADLTFV--PVSYPPVSGTKVHKGFLDSYGE-----------VQ 119
Query: 272 EQVLAEIKRLIEYYEGEEISITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKKI 331
+++A + + Y ++++T GHSLG A A++ A D+ + +G SSS+
Sbjct: 120 NELVATVLDQFKQYPSYKVAVT--GHSLGGATALLCALDLYQR-----EEGLSSSN---- 168
Query: 332 PITVYSFAGPRVGNLKFKERCDELGVKVLRVVNVHDKVPTVP 373
+ +Y+ PRVGN F G+ R VN D VP +P
Sbjct: 169 -LFLYTQGQPRVGNPAFANYVVSTGIPYRRTVNERDIVPHLP 209
>pdb|1TGL|A Chain A, A Serine Protease Triad Forms The Catalytic Centre Of A
Triacylglycerol Lipase
Length = 269
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 212 RDIVVAWRGTVTYIEWIYDLKDILHTANFGSDPSIKIELGFHDLYTKKEQSCNYCTFSAR 271
+ I + +RG+ + WI DL + ++ K+ GF D Y + +
Sbjct: 73 KTIYIVFRGSSSIRNWIADLTFV--PVSYPPVSGTKVHKGFLDSYGE-----------VQ 119
Query: 272 EQVLAEIKRLIEYYEGEEISITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKKI 331
+++A + + Y ++++T GHSLG A A++ A D+ + +G SSS+
Sbjct: 120 NELVATVLDQFKQYPSYKVAVT--GHSLGGATALLCALDLYQR-----EEGLSSSN---- 168
Query: 332 PITVYSFAGPRVGNLKFKERCDELGVKVLRVVNVHDKVPTVP 373
+ +Y+ PRVGN F G+ R VN D VP +P
Sbjct: 169 -LFLYTQGQPRVGNPAFANYVVSTGIPYRRTVNERDIVPHLP 209
>pdb|5TGL|A Chain A, A Model For Interfacial Activation In Lipases From The
Structure Of A Fungal Lipase-Inhibitor Complex
Length = 269
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 212 RDIVVAWRGTVTYIEWIYDLKDILHTANFGSDPSIKIELGFHDLYTKKEQSCNYCTFSAR 271
+ I + +RG+ + WI DL + ++ K+ GF D Y + +
Sbjct: 73 KTIYIVFRGSSSIRNWIADLTFV--PVSYPPVSGTKVHKGFLDSYGE-----------VQ 119
Query: 272 EQVLAEIKRLIEYYEGEEISITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKKI 331
+++A + + Y ++++T GHSLG A A++ A D+ + +G SSS+
Sbjct: 120 NELVATVLDQFKQYPSYKVAVT--GHSLGGATALLCALDLYQR-----EEGLSSSN---- 168
Query: 332 PITVYSFAGPRVGNLKFKERCDELGVKVLRVVNVHDKVPTVP 373
+ +Y+ PRVGN F G+ R VN D VP +P
Sbjct: 169 -LFLYTQGQPRVGNPAFANYVVSTGIPYRRTVNERDIVPHLP 209
>pdb|1TIA|A Chain A, An Unusual Buried Polar Cluster In A Family Of Fungal
Lipases
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 46/235 (19%)
Query: 142 CKYSAASFFKKLDMADSGYQISRYLYATSNINLPKFFQKSRLSSVW---STYANWMGYIA 198
+Y+AAS+++ A G ++S S N P+ S ST + GYIA
Sbjct: 14 VQYAAASYYEADYTAQVGDKLS-----CSKGNCPEVEATGATVSYDFSDSTITDTAGYIA 68
Query: 199 VTTDEEEIKRLGRRDIVVAWRGTVTYIEWIYDLKDILHTANFGSDPSIKIELGFHDLYTK 258
V + V+A+RG+ + W+ D +HT N G ELGF +
Sbjct: 69 VDHTNSAV--------VLAFRGSYSVRNWVADAT-FVHT-NPGLCDGCLAELGFWSSWKL 118
Query: 259 KEQSCNYCTFSAREQVLAEIKRLIEYYEGEEISITFTGHSLGAALAIVSAYDVAELGLNI 318
R+ ++ E+K ++ E+ + GHSLGAA+A ++A D+
Sbjct: 119 -----------VRDDIIKELKEVVAQNPNYELVVV--GHSLGAAVATLAATDL------- 158
Query: 319 VNDGESSSSTKKIPITVYSFAGPRVGNLKFKERCDELGVKVLRVVNVHDKVPTVP 373
G+ S K +Y++A PRVGN + G R + +D VP +P
Sbjct: 159 --RGKGYPSAK-----LYAYASPRVGNAALAKYITAQG-NNFRFTHTNDPVPKLP 205
>pdb|1TIC|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|1TIC|B Chain B, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|1LGY|A Chain A, Lipase Ii From Rhizopus Niveus
pdb|1LGY|B Chain B, Lipase Ii From Rhizopus Niveus
pdb|1LGY|C Chain C, Lipase Ii From Rhizopus Niveus
Length = 269
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 211 RRDIVVAWRGTVTYIEWIYDLKDILHTANFGSDPSIKIELGFHDLYTKKEQSCNYCTFSA 270
++ I + +RGT ++ I D+ + + +++ K+ GF Y EQ N
Sbjct: 73 QKTIYLVFRGTNSFRSAITDI--VFNFSDYKPVKGAKVHAGFLSSY---EQVVNDYFPVV 127
Query: 271 REQVLAEIKRLIEYYEGEEISITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKK 330
+EQ+ A + TGHSLG A A+++ D+ + E S K
Sbjct: 128 QEQLTAH----------PTYKVIVTGHSLGGAQALLAGMDLYQR--------EPRLSPKN 169
Query: 331 IPITVYSFAGPRVGNLKFKERCDELGVKVLRVVNVHDKVPTVP 373
+ ++++ GPRVGN F + G+ R V+ D VP VP
Sbjct: 170 L--SIFTVGGPRVGNPTFAYYVESTGIPFQRTVHKRDIVPHVP 210
>pdb|3TGL|A Chain A, Structure And Molecular Model Refinement Of Rhizomucor
Miehei Triacylglyceride Lipase: A Case Study Of The Use
Of Simulated Annealing In Partial Model Refinement
Length = 269
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 25/162 (15%)
Query: 212 RDIVVAWRGTVTYIEWIYDLKDILHTANFGSDPSIKIELGFHDLYTKKEQSCNYCTFSAR 271
+ I + +RG+ + WI DL + ++ K+ GF D Y + +
Sbjct: 73 KTIYIVFRGSSSIRNWIADLTFV--PVSYPPVSGTKVHKGFLDSYGE-----------VQ 119
Query: 272 EQVLAEIKRLIEYYEGEEISITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKKI 331
+++A + + Y ++++T GHSLG A ++ A D+ + +G SSS+
Sbjct: 120 NELVATVLDQFKQYPSYKVAVT--GHSLGGATVLLCALDLYQR-----EEGLSSSN---- 168
Query: 332 PITVYSFAGPRVGNLKFKERCDELGVKVLRVVNVHDKVPTVP 373
+ +Y+ PRVG+ F G+ R VN D VP +P
Sbjct: 169 -LFLYTQGQPRVGDPAFANYVVSTGIPYRRTVNERDIVPHLP 209
>pdb|3UUF|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 278
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 292 ITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKKIPITVYSFAGPRVGNLKFKER 351
+T GHSLGAA+ ++ A D+ EL + DG + Y F PR+GN F
Sbjct: 139 VTVIGHSLGAAMGLLCAMDI-ELRM----DGGLYKT--------YLFGLPRLGNPTFASF 185
Query: 352 CDE-LGVKVLRVVNVHDKVPTVP 373
D+ +G K ++N D VPTVP
Sbjct: 186 VDQKIGDKFHSIINGRDWVPTVP 208
>pdb|3NGM|A Chain A, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|B Chain B, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|C Chain C, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|D Chain D, Crystal Structure Of Lipase From Gibberella Zeae
Length = 319
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 38/170 (22%)
Query: 211 RRDIVVAWRGTVTYIEWI----YDLKDILHTANFGSDPSIKIELGFHDLYTKKEQSCNYC 266
R++IVV++RG++ W+ +D D T+ G + GF + + + +
Sbjct: 72 RKEIVVSFRGSINIRNWLTNLDFDQDDCSLTSGCG------VHSGFQNAWNEISAA---- 121
Query: 267 TFSAREQVLAEIKRLIEYYEGEEISITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSS 326
A + GHSLG A+A ++ G N+ G
Sbjct: 122 ---------ATAAVAKARKANPSFKVVSVGHSLGGAVATLA-------GANLRIGG---- 161
Query: 327 STKKIPITVYSFAGPRVGNLKFKERCDELGVKVLRVVNVHDKVPTVPGIL 376
P+ +Y++ PRVGN + RV N D VP +P ++
Sbjct: 162 ----TPLDIYTYGSPRVGNTQLAAFVSNQAGGEFRVTNAKDPVPRLPPLI 207
>pdb|3UUE|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 279
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 292 ITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKKIPITVYSFAGPRVGNLKFKER 351
+T GHSLGAA+ ++ A D+ EL + DG + Y F PR+GN F
Sbjct: 140 VTVIGHSLGAAMGLLCAMDI-ELRM----DGGLYKT--------YLFGLPRLGNPTFASF 186
Query: 352 CDE-LGVKVLRVVNVHDKVPTVP 373
D+ +G K ++N D VPTVP
Sbjct: 187 VDQKIGDKFHSIINGRDWVPTVP 209
>pdb|1USW|A Chain A, Crystal Structure Of Ferulic Acid Esterase From
Aspergillus Niger
Length = 260
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 33/149 (22%)
Query: 241 GSDPSIKIELGFHDLYTKKEQSCNYCT---------FSAREQVLAEIKRLIEYYEGEEIS 291
GSD +++++ + CN C S ++QV + +K+ Y + +
Sbjct: 69 GSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQYP--DYA 126
Query: 292 ITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKKIPITVYSFAGPRVGNLKFKER 351
+T TGHSLGA++A ++A A+L N + +Y+F PR GN F
Sbjct: 127 LTVTGHSLGASMAALTA---AQLSATYDN------------VRLYTFGEPRSGNQAFASY 171
Query: 352 CDEL-------GVKVLRVVNVHDKVPTVP 373
++ + RV + +D +P +P
Sbjct: 172 MNDAFQVSSPETTQYFRVTHSNDGIPNLP 200
>pdb|2HL6|A Chain A, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2HL6|B Chain B, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2IX9|A Chain A, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
pdb|2IX9|B Chain B, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
Length = 260
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 33/149 (22%)
Query: 241 GSDPSIKIELGFHDLYTKKEQSCNYCT---------FSAREQVLAEIKRLIEYYEGEEIS 291
GSD +++++ + CN C S ++QV + +K+ Y + +
Sbjct: 69 GSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQYP--DYA 126
Query: 292 ITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKKIPITVYSFAGPRVGNLKFKER 351
+T TGHSLGA++A ++A A+L N + +Y+F PR GN F
Sbjct: 127 LTVTGHSLGASMAALTA---AQLSATYDN------------VRLYTFGEPRSGNQAFASY 171
Query: 352 CDEL-------GVKVLRVVNVHDKVPTVP 373
++ + RV + +D +P +P
Sbjct: 172 MNDAFQVSSPETTQYFRVTHSNDGIPNLP 200
>pdb|1UWC|A Chain A, Feruloyl Esterase From Aspergillus Niger
pdb|1UWC|B Chain B, Feruloyl Esterase From Aspergillus Niger
pdb|1UZA|A Chain A, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
pdb|1UZA|B Chain B, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
Length = 261
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 33/149 (22%)
Query: 241 GSDPSIKIELGFHDLYTKKEQSCNYCT---------FSAREQVLAEIKRLIEYYEGEEIS 291
GSD +++++ + CN C S ++QV + +K+ Y + +
Sbjct: 69 GSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQYP--DYA 126
Query: 292 ITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKKIPITVYSFAGPRVGNLKFKER 351
+T TGHSLGA++A ++A A+L N + +Y+F PR GN F
Sbjct: 127 LTVTGHSLGASMAALTA---AQLSATYDN------------VRLYTFGEPRSGNQAFASY 171
Query: 352 CDEL-------GVKVLRVVNVHDKVPTVP 373
++ + RV + +D +P +P
Sbjct: 172 MNDAFQVSSPETTQYFRVTHSNDGIPNLP 200
>pdb|2BJH|A Chain A, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|B Chain B, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|C Chain C, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
Length = 260
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 33/149 (22%)
Query: 241 GSDPSIKIELGFHDLYTKKEQSCNYCT---------FSAREQVLAEIKRLIEYYEGEEIS 291
GSD +++++ + CN C S ++QV + +K+ Y + +
Sbjct: 69 GSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQYP--DYA 126
Query: 292 ITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKKIPITVYSFAGPRVGNLKFKER 351
+T TGH+LGA++A ++A A+L N + +Y+F PR GN F
Sbjct: 127 LTVTGHALGASMAALTA---AQLSATYDN------------VRLYTFGEPRSGNQAFASY 171
Query: 352 CDEL-------GVKVLRVVNVHDKVPTVP 373
++ + RV + +D +P +P
Sbjct: 172 MNDAFQVSSPETTQYFRVTHSNDGIPNLP 200
>pdb|2ORY|A Chain A, Crystal Structure Of M37 Lipase
pdb|2ORY|B Chain B, Crystal Structure Of M37 Lipase
Length = 346
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 9/128 (7%)
Query: 292 ITFTGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKKIPITVYSFAGPRVGNLKFKER 351
I TGHS G AL+ A + D + ++ I I+ FAGP GN F +
Sbjct: 168 ICVTGHSKGGALSSTLAL--------WLKDIQGVKLSQNIDISTIPFAGPTAGNADFADY 219
Query: 352 CDE-LGVKVLRVVNVHDKVPTVPGILANEKFQFQKHFEEATKFPWSYAHVGVELALDHTN 410
D+ LG + R+ N D VP + +K + E+A+ P Y + + T
Sbjct: 220 FDDCLGDQCTRIANSLDIVPYAWNTNSLKKLKSIYISEQASVKPLLYQRALIRAMIAETK 279
Query: 411 SPFLKNTK 418
K K
Sbjct: 280 GKKYKQIK 287
>pdb|3G7N|A Chain A, Crystal Structure Of A Triacylglycerol Lipase From
Penicillium Expansum At 1.3
pdb|3G7N|B Chain B, Crystal Structure Of A Triacylglycerol Lipase From
Penicillium Expansum At 1.3
Length = 258
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 28/145 (19%)
Query: 174 LPKFFQKSRLSSVWSTYANWMGYIAVTTDEEEIKRLGRRDIVVAWRGTVTYIEWIYDLKD 233
+ K F + + ++ + G++ +T+ ++ I V RG+ T +++ D+
Sbjct: 26 IGKAFDVTIVKRIYDLVTDTNGFVGYSTE--------KKTIAVIMRGSTTITDFVNDIDI 77
Query: 234 ILHT-----ANFGSDPSIKIELGFHDLYTKKEQSCNYCTFSAREQVLAEIKRLIEYYEGE 288
L T F SD +KI G H ++ + + ++ E+K LI Y
Sbjct: 78 ALITPELSGVTFPSD--VKIMRGVHRPWS-----------AVHDTIITEVKALIAKYP-- 122
Query: 289 EISITFTGHSLGAALAIVSAYDVAE 313
+ ++ GHSLG AL ++ +A+
Sbjct: 123 DYTLEAVGHSLGGALTSIAHVALAQ 147
>pdb|3O0D|A Chain A, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|B Chain B, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|C Chain C, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|D Chain D, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|E Chain E, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|F Chain F, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|G Chain G, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
Length = 301
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 98/273 (35%), Gaps = 71/273 (26%)
Query: 124 QACYDSFDFDPHSKYCGTCKYSAASFFKKLDMADSGYQISRYLYATSNINLPKFFQKSRL 183
Q Y+ F+ G C FK + G Q + + N+ L + F RL
Sbjct: 12 QESYNFFEKYARLANIGYCVGPGTKIFKPFN---CGLQCAHF----PNVELIEEFHDPRL 64
Query: 184 SSVWSTYANWMGYIAVTTDEEEIKRLGRRDIVVAWRGTVTYIEWIYDLKDILHTANFGSD 243
+ GY+AV + I + RGT + L+D++
Sbjct: 65 ------IFDVSGYLAVDH--------ASKQIYLVIRGT-------HSLEDVITDIRIMQA 103
Query: 244 PSIKIELGFHDLYTKKEQSCNYCTF---------SAREQVLAEIKRLIEYYEGEEISITF 294
P +L + +C+ C + Q+ ++ +IE Y +I++T
Sbjct: 104 PLTNFDLAAN---ISSTATCDDCLVHNGFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVT- 159
Query: 295 TGHSLGAALAIVSAYDVAELGLNIVNDGESSSSTKKIPITVYSFAGPRVGNLKFKERCDE 354
GHSLG A A++ G+N+ +G P+ V + P VGN F D+
Sbjct: 160 -GHSLGGAAALL-------FGINLKVNGHD-------PLVV-TLGQPIVGNAGFANWVDK 203
Query: 355 L--------------GVKVLRVVNVHDKVPTVP 373
L K+ R+ + D VP VP
Sbjct: 204 LFFGQENPDVSKVSKDRKLYRITHRGDIVPQVP 236
>pdb|3TAI|A Chain A, Crystal Structure Of Nura
pdb|3TAI|B Chain B, Crystal Structure Of Nura
pdb|3TAL|A Chain A, Crystal Structure Of Nura With Manganese
pdb|3TAL|B Chain B, Crystal Structure Of Nura With Manganese
Length = 471
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 202 DEEEIKR-LGRRDIVVAWRGTVTYIEWIYDLKDILHTANFG 241
DEE+++ LG+ DI A T++YIE++Y + +L N
Sbjct: 273 DEEKVELYLGKDDIYDALHXTLSYIEYLYSIDKLLEVKNLA 313
>pdb|3TAZ|A Chain A, Crystal Structure Of Nura Bound To Damp And Manganese
pdb|3TAZ|B Chain B, Crystal Structure Of Nura Bound To Damp And Manganese
Length = 471
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 202 DEEEIKR-LGRRDIVVAWRGTVTYIEWIYDLKDILHTANFG 241
DEE+++ LG+ DI A T++YIE++Y + +L N
Sbjct: 273 DEEKVELYLGKDDIYDALHMTLSYIEYLYSIDKLLEVKNLA 313
>pdb|1N6D|A Chain A, Tricorn Protease In Complex With Tetrapeptide Chloromethyl
Ketone Derivative
pdb|1N6D|B Chain B, Tricorn Protease In Complex With Tetrapeptide Chloromethyl
Ketone Derivative
pdb|1N6D|C Chain C, Tricorn Protease In Complex With Tetrapeptide Chloromethyl
Ketone Derivative
pdb|1N6D|D Chain D, Tricorn Protease In Complex With Tetrapeptide Chloromethyl
Ketone Derivative
pdb|1N6D|E Chain E, Tricorn Protease In Complex With Tetrapeptide Chloromethyl
Ketone Derivative
pdb|1N6D|F Chain F, Tricorn Protease In Complex With Tetrapeptide Chloromethyl
Ketone Derivative
pdb|1N6E|A Chain A, Tricorn Protease In Complex With A Tridecapeptide
Chloromethyl Ketone Derivative
pdb|1N6E|C Chain C, Tricorn Protease In Complex With A Tridecapeptide
Chloromethyl Ketone Derivative
pdb|1N6E|E Chain E, Tricorn Protease In Complex With A Tridecapeptide
Chloromethyl Ketone Derivative
pdb|1N6E|G Chain G, Tricorn Protease In Complex With A Tridecapeptide
Chloromethyl Ketone Derivative
pdb|1N6E|I Chain I, Tricorn Protease In Complex With A Tridecapeptide
Chloromethyl Ketone Derivative
pdb|1N6E|K Chain K, Tricorn Protease In Complex With A Tridecapeptide
Chloromethyl Ketone Derivative
pdb|1N6F|A Chain A, Tricorn Protease In Complex With Z-Phe-Diketo-Arg-Glu-Phe
pdb|1N6F|B Chain B, Tricorn Protease In Complex With Z-Phe-Diketo-Arg-Glu-Phe
pdb|1N6F|C Chain C, Tricorn Protease In Complex With Z-Phe-Diketo-Arg-Glu-Phe
pdb|1N6F|D Chain D, Tricorn Protease In Complex With Z-Phe-Diketo-Arg-Glu-Phe
pdb|1N6F|E Chain E, Tricorn Protease In Complex With Z-Phe-Diketo-Arg-Glu-Phe
pdb|1N6F|F Chain F, Tricorn Protease In Complex With Z-Phe-Diketo-Arg-Glu-Phe
Length = 1071
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 16/111 (14%)
Query: 167 YATSNINLPKF-FQKSRLSSVWSTYANWMGYIAVTTDEEEIKRLGRRDIVVAWRGTV-TY 224
YA S+ ++ F F+K L + T W G + +T I GTV T
Sbjct: 962 YAGSDGDIFSFSFKKLGLGKLIGT-RTWGGVVGITPKRRLID------------GTVLTQ 1008
Query: 225 IEWIYDLKDI-LHTANFGSDPSIKIELGFHDLYTKKEQSCNYCTFSAREQV 274
E+ + +D N+G DP ++IE HD + K+ +Y + E++
Sbjct: 1009 PEFAFWFRDAGFGVENYGVDPDVEIEYAPHDYLSGKDPQIDYAIDALIEEL 1059
>pdb|1K32|A Chain A, Crystal Structure Of The Tricorn Protease
pdb|1K32|B Chain B, Crystal Structure Of The Tricorn Protease
pdb|1K32|C Chain C, Crystal Structure Of The Tricorn Protease
pdb|1K32|D Chain D, Crystal Structure Of The Tricorn Protease
pdb|1K32|E Chain E, Crystal Structure Of The Tricorn Protease
pdb|1K32|F Chain F, Crystal Structure Of The Tricorn Protease
Length = 1045
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 16/111 (14%)
Query: 167 YATSNINLPKF-FQKSRLSSVWSTYANWMGYIAVTTDEEEIKRLGRRDIVVAWRGTV-TY 224
YA S+ ++ F F+K L + T W G + +T I GTV T
Sbjct: 936 YAGSDGDIFSFSFKKLGLGKLIGT-RTWGGVVGITPKRRLID------------GTVLTQ 982
Query: 225 IEWIYDLKDI-LHTANFGSDPSIKIELGFHDLYTKKEQSCNYCTFSAREQV 274
E+ + +D N+G DP ++IE HD + K+ +Y + E++
Sbjct: 983 PEFAFWFRDAGFGVENYGVDPDVEIEYAPHDYLSGKDPQIDYAIDALIEEL 1033
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,078,562
Number of Sequences: 62578
Number of extensions: 606119
Number of successful extensions: 1319
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1296
Number of HSP's gapped (non-prelim): 29
length of query: 535
length of database: 14,973,337
effective HSP length: 103
effective length of query: 432
effective length of database: 8,527,803
effective search space: 3684010896
effective search space used: 3684010896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)