BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009414
(535 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 204/442 (46%), Gaps = 29/442 (6%)
Query: 76 LPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPDVAKEIL--NSSVF 133
LP +GS+ + H + + + +G +I +AKE+L F
Sbjct: 16 LPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDF 75
Query: 134 ADRPVKESAYSLMFNR-AIGFAPYGVYWRTLRRIA-ATHLFCPKQINSAEPQRSDIASQM 191
+ RP + NR I FA G +W+ RR+A AT E S +
Sbjct: 76 SGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTL 135
Query: 192 VSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLL 251
M+A++ G + + + A N + F Y + + E + E D L
Sbjct: 136 CDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYK----NGDPELNVIQNYNEGIIDNL 191
Query: 252 GKLNFSDHLPWLADFDLQKV-RLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVL 310
K + D +PWL F + + +L+S V N +N+I++ ++ S ++ +D L
Sbjct: 192 SKDSLVDLVPWLKIFPNKTLEKLKSH--VKIRNDLLNKILENYKEKFRS-DSITNMLDTL 248
Query: 311 LSL--------SGPDR----LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQS 358
+ +GPD+ LSD+ I+ + ++ G +T +++W LA ++ +P ++
Sbjct: 249 MQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKK 308
Query: 359 KVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYH 418
K++ E+DQ VG SR T SD ++ L A ++EV+RL P P+L + A D+++ +
Sbjct: 309 KLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHK-ANVDSSIGEFA 367
Query: 419 VPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRT 478
V GT ++N+WA+ + + + P +FMPERF+NP L+ + PFG+G R+
Sbjct: 368 VDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGT----QLISPSVSYLPFGAGPRS 423
Query: 479 CPGKGLGLATVSFWVGTLLHEF 500
C G+ L + + LL F
Sbjct: 424 CIGEILARQELFLIMAWLLQRF 445
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 211/489 (43%), Gaps = 41/489 (8%)
Query: 61 KGSKACSKPIPGPRGLPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCS 120
K + + KP PGP P IG+ + + H L V LG +++
Sbjct: 3 KKTSSKGKP-PGPFAWPLIGNAAAVGQAAH--LSFARLARRYGDVFQIRLGSCPIVVLNG 59
Query: 121 PDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHL--FCPKQ 176
+ L S FADRP S + R++ F Y +W+ RR A + + F +Q
Sbjct: 60 ERAIHQALVQQGSAFADRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQ 119
Query: 177 INSAEPQRSDIASQMVSMIA-----SYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGY 231
S + + S+ ++A S G+ R + A N M FG +Y+
Sbjct: 120 PRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYS---- 175
Query: 232 SSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNR-FVNRII 290
+ E R L EE +G + D +PWL F VR + Q+NR F N I+
Sbjct: 176 HDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFP-NPVRTVFREF-EQLNRNFSNFIL 233
Query: 291 QEHRTTQTSLQRNS---DFVDVLL----------SLSGPDRLSDHDIVAVLWEMIFRGTD 337
+ SL+ + D +D + S G RL ++ A + ++ D
Sbjct: 234 DKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQD 293
Query: 338 TVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHP 397
T++ ++W+L +PD+Q++V +ELDQVVGR R D ++ Y+ A + E +R
Sbjct: 294 TLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSS 353
Query: 398 PGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAAD 457
P ++ +T+V YH+P T VN W++ DP + +P F P RF++ +
Sbjct: 354 FVP-VTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDG-- 410
Query: 458 MDISLMGSDL--RLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEV 515
L+ DL R+ F G+R C G+ L + ++ L H+ + + +P ++
Sbjct: 411 ----LINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFS 466
Query: 516 LRLSCEMKN 524
L+ + K+
Sbjct: 467 YGLTIKPKS 475
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 217/494 (43%), Gaps = 52/494 (10%)
Query: 60 KKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITC 119
K SK P PGP G P IG M + PH L V+ +G T V++
Sbjct: 4 KTSSKGLKNP-PGPWGWPLIGHMLTLGKNPH--LALSRMSQQYGDVLQIRIGSTPVVVLS 60
Query: 120 SPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAP-YGVYWRTLRRIAATHLFC--- 173
D ++ L F RP + + +++ F+P G W RR+A L
Sbjct: 61 GLDTIRQALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSI 120
Query: 174 ---PKQINSA--EPQRSDIASQMVSMIASY--GGSAFR-LRDILKPASLNNMMCSV-FGR 224
P S E S A ++S + G F R ++ S+ N++C++ FGR
Sbjct: 121 ASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVV--VSVTNVICAICFGR 178
Query: 225 KYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLP---WLADFDLQKVRLRSSKLVPQ 281
+Y ++ E L L +++G N +D +P +L + L + + K
Sbjct: 179 RYD----HNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFY-- 232
Query: 282 VNRFVNRIIQEH-RTTQTSLQRNSDFVDVL--------LSLSGPDRLSDHDIVAVLWEMI 332
F+ ++++EH +T + R D D L L + +LSD I+ ++ ++
Sbjct: 233 --SFMQKMVKEHYKTFEKGHIR--DITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLF 288
Query: 333 FRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEV 392
G DTV I W L +V++P +Q K+ ELD V+GRSR SD + Y+ A + E
Sbjct: 289 GAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILET 348
Query: 393 VRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVN 452
R H + DT++ +++P G VN W I D +++ +P +F+PERF+
Sbjct: 349 FR-HSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLT 407
Query: 453 PEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKW-----VQSDY 507
P+ A I + S+ ++ FG G+R C G+ + V ++ LL ++ V+ D
Sbjct: 408 PDGA---IDKVLSE-KVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDM 463
Query: 508 DPVDLSEVLRLSCE 521
P+ + CE
Sbjct: 464 TPIYGLTMKHACCE 477
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 127/519 (24%), Positives = 211/519 (40%), Gaps = 84/519 (16%)
Query: 53 AWGKH---LYKKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHN---LXXXXXXXXXXRVM 106
A+G H L+KK IPGP LPF+G++ L +H + +V
Sbjct: 2 AYGTHSHGLFKKLG------IPGPTPLPFLGNI-----LSYHKGFCMFDMECHKKYGKVW 50
Query: 107 AFSLGETRVIITCSPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVY------- 159
F G+ V+ PD+ K +L VKE YS+ NR F P G
Sbjct: 51 GFYDGQQPVLAITDPDMIKTVL---------VKE-CYSVFTNRR-PFGPVGFMKSAISIA 99
Query: 160 ----WRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYG-------------GSA 202
W+ LR + + S +MV +IA YG G
Sbjct: 100 EDEEWKRLRSLLSPTF------------TSGKLKEMVPIIAQYGDVLVRNLRREAETGKP 147
Query: 203 FRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFS-DHLP 261
L+D+ S++ + + FG L + +L+ +D L S P
Sbjct: 148 VTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLR--FDFLDPFFLSITVFP 205
Query: 262 WLAD-FDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR-- 318
+L ++ + + ++ + + V R+ +E R T R DF+ +++
Sbjct: 206 FLIPILEVLNICVFPREVTNFLRKSVKRM-KESRLEDTQKHR-VDFLQLMIDSQNSKETE 263
Query: 319 ----LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPL 374
LSD ++VA IF G +T + ++ +I+ + HPD+Q K+ E+D V+ P
Sbjct: 264 SHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP 323
Query: 375 TESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMR 434
T + M YL VV E +RL P + R+ D ++ +P G M+ +A+ R
Sbjct: 324 TYDTVLQMEYLDMVVNETLRLFPIA--MRLERVCKKDVEINGMFIPKGVVVMIPSYALHR 381
Query: 435 DPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVG 494
DP+ + +P KF+PERF ++D + PFGSG R C G L + +
Sbjct: 382 DPKYWTEPEKFLPERFSKKNKDNIDPYI------YTPFGSGPRNCIGMRFALMNMKLALI 435
Query: 495 TLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR 533
+L F + + L L + + P+ ++V +R
Sbjct: 436 RVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESR 474
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/519 (24%), Positives = 211/519 (40%), Gaps = 83/519 (15%)
Query: 50 GGHAWGKHLYKKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHN---LXXXXXXXXXXRVM 106
G H+ G L+KK IPGP LPF+G++ L +H + +V
Sbjct: 6 GTHSHG--LFKKLG------IPGPTPLPFLGNI-----LSYHKGFCMFDMECHKKYGKVW 52
Query: 107 AFSLGETRVIITCSPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVY------- 159
F G+ V+ PD+ K +L VKE YS+ NR F P G
Sbjct: 53 GFYDGQQPVLAITDPDMIKTVL---------VKE-CYSVFTNRR-PFGPVGFMKSAISIA 101
Query: 160 ----WRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYG-------------GSA 202
W+ LR + + S +MV +IA YG G
Sbjct: 102 EDEEWKRLRSLLSPTF------------TSGKLKEMVPIIAQYGDVLVRNLRREAETGKP 149
Query: 203 FRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFS-DHLP 261
L+D+ S++ + + FG L + +L+ +D L S P
Sbjct: 150 VTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLR--FDFLDPFFLSITVFP 207
Query: 262 WLAD-FDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR-- 318
+L ++ + + ++ + + V R+ +E R T R DF+ +++
Sbjct: 208 FLIPILEVLNICVFPREVTNFLRKSVKRM-KESRLEDTQKHR-VDFLQLMIDSQNSKETE 265
Query: 319 ----LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPL 374
LSD ++VA IF G +T + ++ +I+ + HPD+Q K+ E+D V+ P
Sbjct: 266 SHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP 325
Query: 375 TESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMR 434
T + M YL VV E +RL P + R+ D ++ +P G M+ +A+ R
Sbjct: 326 TYDTVLQMEYLDMVVNETLRLFPIA--MRLERVCKKDVEINGMFIPKGVVVMIPSYALHR 383
Query: 435 DPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVG 494
DP+ + +P KF+PERF ++D + PFGSG R C G L + +
Sbjct: 384 DPKYWTEPEKFLPERFSKKNKDNIDPYI------YTPFGSGPRNCIGMRFALMNMKLALI 437
Query: 495 TLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR 533
+L F + + L L + + P+ ++V +R
Sbjct: 438 RVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESR 476
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/519 (24%), Positives = 211/519 (40%), Gaps = 83/519 (15%)
Query: 50 GGHAWGKHLYKKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHN---LXXXXXXXXXXRVM 106
G H+ G L+KK IPGP LPF+G++ L +H + +V
Sbjct: 5 GTHSHG--LFKKLG------IPGPTPLPFLGNI-----LSYHKGFCMFDMECHKKYGKVW 51
Query: 107 AFSLGETRVIITCSPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVY------- 159
F G+ V+ PD+ K +L VKE YS+ NR F P G
Sbjct: 52 GFYDGQQPVLAITDPDMIKTVL---------VKE-CYSVFTNRR-PFGPVGFMKSAISIA 100
Query: 160 ----WRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYG-------------GSA 202
W+ LR + + S +MV +IA YG G
Sbjct: 101 EDEEWKRLRSLLSPTF------------TSGKLKEMVPIIAQYGDVLVRNLRREAETGKP 148
Query: 203 FRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFS-DHLP 261
L+D+ S++ + + FG L + +L+ +D L S P
Sbjct: 149 VTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLR--FDFLDPFFLSITVFP 206
Query: 262 WLAD-FDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR-- 318
+L ++ + + ++ + + V R+ +E R T R DF+ +++
Sbjct: 207 FLIPILEVLNICVFPREVTNFLRKSVKRM-KESRLEDTQKHR-VDFLQLMIDSQNSKETE 264
Query: 319 ----LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPL 374
LSD ++VA IF G +T + ++ +I+ + HPD+Q K+ E+D V+ P
Sbjct: 265 SHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP 324
Query: 375 TESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMR 434
T + M YL VV E +RL P + R+ D ++ +P G M+ +A+ R
Sbjct: 325 TYDTVLQMEYLDMVVNETLRLFPIA--MRLERVCKKDVEINGMFIPKGVVVMIPSYALHR 382
Query: 435 DPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVG 494
DP+ + +P KF+PERF ++D + PFGSG R C G L + +
Sbjct: 383 DPKYWTEPEKFLPERFSKKNKDNIDPYI------YTPFGSGPRNCIGMRFALMNMKLALI 436
Query: 495 TLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR 533
+L F + + L L + + P+ ++V +R
Sbjct: 437 RVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESR 475
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 180/435 (41%), Gaps = 30/435 (6%)
Query: 79 IGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPDVAKEIL--NSSVFADR 136
I S++ + LPH + + + LG ++ DV KE L S +FADR
Sbjct: 26 IYSLAASSELPH--VYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADR 83
Query: 137 PVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHL-FCPKQINSAEPQRSDIASQMVSMI 195
P + + + YG W RR+A + S E + + I
Sbjct: 84 PCLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAI 143
Query: 196 ASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLN 255
+Y G F + ++ A N +FG ++ +T+ + + L E +L +
Sbjct: 144 ETYKGRPFDFKQLITNAVSNITNLIIFGERFTY----EDTDFQHMIELFSENVELAASAS 199
Query: 256 --FSDHLPWLA--DFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLL 311
+ PW+ F + R++ +V F++R+I E + Q FVD L
Sbjct: 200 VFLYNAFPWIGILPFGKHQQLFRNAAVVYD---FLSRLI-EKASVNRKPQLPQHFVDAYL 255
Query: 312 SLSGPDR------LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELD 365
+ S +++ + E+I GT+T ++ W + M L+P+IQ +V E+D
Sbjct: 256 DEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEID 315
Query: 366 QVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTA 425
++G + + D M Y AV+ EV+R PL + + D V Y +P GTT
Sbjct: 316 LIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATS-EDAVVRGYSIPKGTTV 374
Query: 426 MVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLG 485
+ N++++ D + + DP F PERF++ L PF GRR C G+ L
Sbjct: 375 ITNLYSVHFDEKYWRDPEVFHPERFLDSSG------YFAKKEALVPFSLGRRHCLGEHLA 428
Query: 486 LATVSFWVGTLLHEF 500
+ + LL F
Sbjct: 429 RMEMFLFFTALLQRF 443
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 180/435 (41%), Gaps = 30/435 (6%)
Query: 79 IGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPDVAKEIL--NSSVFADR 136
I S++ + LPH + + + LG ++ DV KE L S +FADR
Sbjct: 26 IYSLAASSELPH--VYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADR 83
Query: 137 PVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHL-FCPKQINSAEPQRSDIASQMVSMI 195
P + + + YG W RR+A + S E + + I
Sbjct: 84 PCLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAI 143
Query: 196 ASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLN 255
+Y G F + ++ A N +FG ++ +T+ + + L E +L +
Sbjct: 144 ETYKGRPFDFKQLITNAVSNITNLIIFGERFTY----EDTDFQHMIELFSENVELAASAS 199
Query: 256 --FSDHLPWLA--DFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLL 311
+ PW+ F + R++ +V F++R+I E + Q FVD L
Sbjct: 200 VFLYNAFPWIGILPFGKHQQLFRNAAVVYD---FLSRLI-EKASVNRKPQLPQHFVDAYL 255
Query: 312 SLSGPDR------LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELD 365
+ S +++ + E+I GT+T ++ W + M L+P+IQ +V E+D
Sbjct: 256 DEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEID 315
Query: 366 QVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTA 425
++G + + D M Y AV+ EV+R PL + + D V Y +P GTT
Sbjct: 316 LIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATS-EDAVVRGYSIPKGTTV 374
Query: 426 MVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLG 485
+ N++++ D + + DP F PERF++ L PF GRR C G+ L
Sbjct: 375 ITNLYSVHFDEKYWRDPEVFHPERFLDSSG------YFAKKEALVPFSLGRRHCLGEHLA 428
Query: 486 LATVSFWVGTLLHEF 500
+ + LL F
Sbjct: 429 RMEMFLFFTALLQRF 443
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 182/427 (42%), Gaps = 57/427 (13%)
Query: 105 VMAFSLGETRVIITCSPDVAKEIL--NSSVFADRPVKESAYSLMF---NRAIGFAPYGVY 159
V + L T V++ +E L + ADRP L F ++ + A YG
Sbjct: 46 VFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPA 105
Query: 160 WRTLRRIAAT---HLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNN 216
WR RR + + +L K+ S E ++ A+ + + A++ G FR +L A N
Sbjct: 106 WREQRRFSVSTLRNLGLGKK--SLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNV 163
Query: 217 MMCSVFGRKYALLGYSSNTEARRLSRLVEEGY--------DLLGKLNFSDHLPWLADFDL 268
+ GR++ + RL L +EG ++L + H+P LA
Sbjct: 164 IASLTCGRRFEY----DDPRFLRLLDLAQEGLKEESGFLREVLNAVPVDRHIPALAG--- 216
Query: 269 QKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLS-----LSGPDR-LSDH 322
+ +R + + L ++ ++ EHR T Q D + L+ P+ +D
Sbjct: 217 KVLRFQKAFLTQ-----LDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDE 271
Query: 323 DIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSM 382
++ V+ ++ G T + + W L M+LHPD+Q +V E+D V+G+ R D M
Sbjct: 272 NLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHM 331
Query: 383 VYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADP 442
Y AV+ EV R P L + D V + +P GTT + N+ ++++D ++ P
Sbjct: 332 PYTTAVIHEVQRFGDIVP-LGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKP 390
Query: 443 LKFMPE-------RFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGT 495
+F PE FV PEA PF +GRR C G+ L + + +
Sbjct: 391 FRFHPEHFLDAQGHFVKPEA-------------FLPFSAGRRACLGEPLARMELFLFFTS 437
Query: 496 LLHEFKW 502
LL F +
Sbjct: 438 LLQHFSF 444
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 212/505 (41%), Gaps = 48/505 (9%)
Query: 56 KHLYKKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRV 115
K L + K P P P G P +G + + PH L V+ +G T V
Sbjct: 5 KGLRPRVPKGLKSP-PEPWGWPLLGHVLTLGKNPH--LALSRMSQRYGDVLQIRIGSTPV 61
Query: 116 IITCSPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAP-YGVYWRTLRRIAATHLF 172
++ D ++ L F RP ++ + +++ F+ G W RR+A L
Sbjct: 62 LVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALN 121
Query: 173 C------PKQINSA--EPQRSDIASQMVS----MIASYGGSAFRLRDILKPASLNNMMCS 220
P +S E S A ++S ++A G + ++ A++ MC
Sbjct: 122 TFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMC- 180
Query: 221 VFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLP---WLADFDLQKVRLRSSK 277
FG+ + S+ E L + E + N D P +L + LQ+ + + +
Sbjct: 181 -FGQHFP----ESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQR 235
Query: 278 LVPQVNRFVNRIIQEHRTTQTSLQRNS--DFVDVLL--SLSGP----DRLSDHDIVAVLW 329
+ F+ + +QEH +NS D L S GP + + IV ++
Sbjct: 236 FL----WFLQKTVQEH---YQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVN 288
Query: 330 EMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVV 389
++ G DTV I W L +V P+IQ K+ ELD V+GR R SD + YL A +
Sbjct: 289 DIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFI 348
Query: 390 KEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPER 449
E R H + DTT++ +++P VN W + DPE++ DP +F PER
Sbjct: 349 LETFR-HSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPER 407
Query: 450 FVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDP 509
F+ + ++ L ++ FG G+R C G+ L + ++ LL + ++
Sbjct: 408 FLTADGTAINKPL---SEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK 464
Query: 510 VDLSEVLRLSCEMKNPLTVRVHARR 534
VDL+ + L+ MK+ V ARR
Sbjct: 465 VDLTPIYGLT--MKHARCEHVQARR 487
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 208/480 (43%), Gaps = 61/480 (12%)
Query: 61 KGSKACSKPIPGPRGLPFIGS-MSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITC 119
K + + K PGP LPFIG+ + L T +++L V LG RV++ C
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGP--VFTIHLGPRRVVVLC 60
Query: 120 SPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRR--IAATHLFCPK 175
D +E L + F+ R +++ + +F G + LRR IA F
Sbjct: 61 GHDAVREALVDQAEEFSGRG-EQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVG 119
Query: 176 QINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNT 235
+ E + + A ++ + GG+ L N + VFG ++ +
Sbjct: 120 K-RGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDY----KDK 174
Query: 236 EARRLSRLVEEGYDLLGKLNFSD---------------HLPWLADFDLQKVRLRSSKLVP 280
E L R+ +LG F+ HLP + ++ +L+
Sbjct: 175 EFLSLLRM------MLGSFQFTSTSTGQLYEMFSSVMKHLPG--------PQQQAFQLLQ 220
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNS--DFVD-VLLSLSGPDRLSD-----HDIVAVLWEMI 332
+ F+ + + EH Q +L NS DF+D L+ + ++ + ++V +
Sbjct: 221 GLEDFIAKKV-EH--NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLF 277
Query: 333 FRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEV 392
F GT+TV+ + + ++ HP++++KVH E+D+V+G++R D M Y+ AV+ E+
Sbjct: 278 FAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEI 337
Query: 393 VRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVN 452
R P + AR DT + +P GT + +++RDP +++P F P+ F+N
Sbjct: 338 QRFGDVIP-MGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLN 396
Query: 453 PEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDL 512
+ SD PF G+R C G+GL + + T++ F+ ++S P D+
Sbjct: 397 EKG-----QFKKSDA-FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKDI 449
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 182/427 (42%), Gaps = 57/427 (13%)
Query: 105 VMAFSLGETRVIITCSPDVAKEIL--NSSVFADRPVKESAYSLMF---NRAIGFAPYGVY 159
V + L T V++ +E L + ADRP L F ++ + A YG
Sbjct: 46 VFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPA 105
Query: 160 WRTLRRIAAT---HLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNN 216
WR RR + + +L K+ S E ++ A+ + + A++ G FR +L A N
Sbjct: 106 WREQRRFSVSTLRNLGLGKK--SLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNV 163
Query: 217 MMCSVFGRKYALLGYSSNTEARRLSRLVEEGY--------DLLGKLNFSDHLPWLADFDL 268
+ GR++ + RL L +EG ++L + H+P LA
Sbjct: 164 IASLTCGRRFEY----DDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAG--- 216
Query: 269 QKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLS-----LSGPDR-LSDH 322
+ +R + + L ++ ++ EHR T Q D + L+ P+ +D
Sbjct: 217 KVLRFQKAFLTQ-----LDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDE 271
Query: 323 DIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSM 382
++ V+ ++ G T + + W L M+LHPD+Q +V E+D V+G+ R D M
Sbjct: 272 NLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHM 331
Query: 383 VYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADP 442
Y AV+ EV R P L + D V + +P GTT + N+ ++++D ++ P
Sbjct: 332 PYTTAVIHEVQRFGDIVP-LGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKP 390
Query: 443 LKFMPE-------RFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGT 495
+F PE FV PEA PF +GRR C G+ L + + +
Sbjct: 391 FRFHPEHFLDAQGHFVKPEA-------------FLPFSAGRRACLGEPLARMELFLFFTS 437
Query: 496 LLHEFKW 502
LL F +
Sbjct: 438 LLQHFSF 444
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 209/481 (43%), Gaps = 62/481 (12%)
Query: 60 KKGSKACSKPIPGPRGLPFIGS-MSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIIT 118
KK S P PGP LPFIG+ + L T +++L V LG RV++
Sbjct: 3 KKTSSKGKLP-PGPTPLPFIGNYLQLNTEQMYNSLMKISERYGP--VFTIHLGPRRVVVL 59
Query: 119 CSPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRR--IAATHLFCP 174
C D +E L + F+ R +++ + +F G + LRR IA F
Sbjct: 60 CGHDAVREALVDQAEEFSGRG-EQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGV 118
Query: 175 KQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSN 234
+ E + + A ++ + GG+ L N + VFG ++ +
Sbjct: 119 GK-RGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDY----KD 173
Query: 235 TEARRLSRLVEEGYDLLGKLNFSD---------------HLPWLADFDLQKVRLRSSKLV 279
E L R+ +LG F+ HLP + ++ +L+
Sbjct: 174 KEFLSLLRM------MLGIFQFTSTSTGQLYEMFSSVMKHLPG--------PQQQAFQLL 219
Query: 280 PQVNRFVNRIIQEHRTTQTSLQRNS--DFVD-VLLSLSGPDRLSD-----HDIVAVLWEM 331
+ F+ + + EH Q +L NS DF+D L+ + ++ + ++V ++
Sbjct: 220 QGLEDFIAKKV-EH--NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQL 276
Query: 332 IFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKE 391
GT+TV+ + + ++ HP++++KVH E+D+V+G++R D M Y+ AV+ E
Sbjct: 277 FIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHE 336
Query: 392 VVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFV 451
+ R P +S AR DT + +P GT + +++RDP +++P F P+ F+
Sbjct: 337 IQRFGDVIP-MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 452 NPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVD 511
N + SD PF G+R C G+GL + + T++ F+ ++S P D
Sbjct: 396 NEKG-----QFKKSDA-FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKD 448
Query: 512 L 512
+
Sbjct: 449 I 449
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 209/480 (43%), Gaps = 61/480 (12%)
Query: 61 KGSKACSKPIPGPRGLPFIGS-MSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITC 119
K + + K PGP LPFIG+ + L T +++L V LG RV++ C
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGP--VFTIHLGPRRVVVLC 60
Query: 120 SPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRR--IAATHLFCPK 175
D +E L + F+ R +++ + +F G + LRR IA F
Sbjct: 61 GHDAVREALVDQAEEFSGRG-EQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVG 119
Query: 176 QINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNT 235
+ E + + A ++ + GG+ L N + VFG ++ +
Sbjct: 120 K-RGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDY----KDK 174
Query: 236 EARRLSRLVEEGYDLLGKLNFSD---------------HLPWLADFDLQKVRLRSSKLVP 280
E L R+ +LG F+ HLP + ++ +L+
Sbjct: 175 EFLSLLRM------MLGIFQFTSTSTGQLYEMFSSVMKHLPG--------PQQQAFQLLQ 220
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNS--DFVD-VLLSLSGPDRLSD-----HDIVAVLWEMI 332
+ F+ + + EH Q +L NS DF+D L+ + ++ + ++V ++
Sbjct: 221 GLEDFIAKKV-EH--NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLF 277
Query: 333 FRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEV 392
GT+TV+ + + ++ HP++++KVH E+D+V+G++R D M Y+ AV+ E+
Sbjct: 278 VGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEI 337
Query: 393 VRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVN 452
R P +S AR DT + +P GT + +++RDP +++P F P+ F+N
Sbjct: 338 QRFGDVIP-MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLN 396
Query: 453 PEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDL 512
+ SD PF G+R C G+GL + + T++ F+ ++S P D+
Sbjct: 397 EKG-----QFKKSDA-FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKDI 449
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 200/474 (42%), Gaps = 48/474 (10%)
Query: 61 KGSKACSKPIPGPRGLPFIGSMSLM--TNLPHHNLXXXXXXXXXXRVMAFSLGETRVIIT 118
K + + K PGP LP IG++ + N+P V +G R+++
Sbjct: 3 KKTSSKGKLPPGPFPLPIIGNLFQLELKNIPK---SFTRLAQRFGPVFTLYVGSQRMVVM 59
Query: 119 CSPDVAKEIL-----NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHL-- 171
KE L S D P A+ +R I F G W+ +RR + T L
Sbjct: 60 HGYKAVKEALLDYKDEFSGRGDLP----AFHAHRDRGIIFN-NGPTWKDIRRFSLTTLRN 114
Query: 172 -FCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLG 230
KQ N + QR A ++ + G F ++ A N ++ + RK+
Sbjct: 115 YGMGKQGNESRIQRE--AHFLLEALRKTQGQPFDPTFLIGCAPCN-VIADILFRKH---- 167
Query: 231 YSSNTEA-RRLSRLVEEGYDLLGK--LNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVN 287
+ N E RL L E + LL L ++ P + L + K V +V +V+
Sbjct: 168 FDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHY-LPGSHRKVIKNVAEVKEYVS 226
Query: 288 RIIQEHRTTQTSLQRNS--DFVDVLL-----SLSGPDRLSDHD-IVAVLWEMIFRGTDTV 339
++EH SL N D D LL +RL D I + ++ F GT+T
Sbjct: 227 ERVKEH---HQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETT 283
Query: 340 AILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPG 399
+ + + L ++ +P+I+ K+H E+D+V+G SR D Q M Y+ AVV E+ R
Sbjct: 284 STTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLV 343
Query: 400 PLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMD 459
P + A DT Y +P GT + + +++ D + + DP KF PE F+N
Sbjct: 344 P-SNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENG---- 398
Query: 460 ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLS 513
SD PF +G+R C G+GL + + +L F ++ DP D+
Sbjct: 399 -KFKYSDY-FKPFSTGKRVCAGEGLARMELFLLLCAILQHFN-LKPLVDPKDID 449
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 208/481 (43%), Gaps = 62/481 (12%)
Query: 60 KKGSKACSKPIPGPRGLPFIGS-MSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIIT 118
KK S P PGP LPFIG+ + L T +++L V LG RV++
Sbjct: 3 KKTSSKGKLP-PGPTPLPFIGNYLQLNTEQMYNSLMKISERYGP--VFTIHLGPRRVVVL 59
Query: 119 CSPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRR--IAATHLFCP 174
C D +E L + F+ R +++ + +F G + LRR IA F
Sbjct: 60 CGHDAVREALVDQAEEFSGRG-EQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGV 118
Query: 175 KQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSN 234
+ E + + A ++ + GG+ L N + VFG ++ +
Sbjct: 119 GK-RGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDY----KD 173
Query: 235 TEARRLSRLVEEGYDLLGKLNFSD---------------HLPWLADFDLQKVRLRSSKLV 279
E L R+ +LG F+ HLP + ++ +L+
Sbjct: 174 KEFLSLLRM------MLGIFQFTSTSTGQLYEMFSSVMKHLPG--------PQQQAFQLL 219
Query: 280 PQVNRFVNRIIQEHRTTQTSLQRNS--DFVD-VLLSLSGPDRLSD-----HDIVAVLWEM 331
+ F+ + + EH Q +L NS DF+D L+ + ++ + ++V +
Sbjct: 220 QGLEDFIAKKV-EH--NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNL 276
Query: 332 IFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKE 391
GT+TV+ + + ++ HP++++KVH E+D+V+G++R D M Y+ AV+ E
Sbjct: 277 FIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHE 336
Query: 392 VVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFV 451
+ R P +S AR DT + +P GT + +++RDP +++P F P+ F+
Sbjct: 337 IQRFGDVIP-MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 452 NPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVD 511
N + SD PF G+R C G+GL + + T++ F+ ++S P D
Sbjct: 396 NEKG-----QFKKSDA-FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKD 448
Query: 512 L 512
+
Sbjct: 449 I 449
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 199/488 (40%), Gaps = 77/488 (15%)
Query: 61 KGSKACSKPIPGPRGLPFIGS-MSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITC 119
K + + K PGP LPFIG+ + L T +++L V LG RV++ C
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGP--VFTIHLGPRRVVVLC 60
Query: 120 SPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRR--IAATHLFCPK 175
D +E L + F+ R +++ + +F G + LRR IA F
Sbjct: 61 GHDAVREALVDQAEEFSGRG-EQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVG 119
Query: 176 QINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNT 235
+ E + + A ++ + GG+ L N + VFG ++ +
Sbjct: 120 K-RGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDY----KDK 174
Query: 236 EARRLSRLVEEGYDLLGKLNFSD---------------HLPW-----------LADFDLQ 269
E L R+ +LG F+ HLP L DF +
Sbjct: 175 EFLSLLRM------MLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAK 228
Query: 270 KVRLRSSKLVPQ-----VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDI 324
KV L P ++ F+ R+ +E + T ++
Sbjct: 229 KVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLK-------------------NL 269
Query: 325 VAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVY 384
V ++ GT+TV+ + + ++ HP++++KVH E+D+V+G++R D M Y
Sbjct: 270 VMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPY 329
Query: 385 LPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLK 444
+ AV+ E+ R P +S AR DT + +P GT + +++RDP +++P
Sbjct: 330 MEAVIHEIQRFGDVIP-MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQD 388
Query: 445 FMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQ 504
F P+ F+N + SD PF G+R C G+GL + + T++ F+ ++
Sbjct: 389 FNPQHFLNEKG-----QFKKSDA-FVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LK 441
Query: 505 SDYDPVDL 512
S P D+
Sbjct: 442 SSQSPKDI 449
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 195/488 (39%), Gaps = 77/488 (15%)
Query: 61 KGSKACSKPIPGPRGLPFIGS-MSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITC 119
K + + K PGP LPFIG+ + L T +++L V LG RV++ C
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGP--VFTIHLGPRRVVVLC 60
Query: 120 SPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRR--IAATHLFCPK 175
D KE L + F+ R + + L + F+ G + LRR IA F
Sbjct: 61 GHDAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFS-NGERAKQLRRFSIATLRGFGVG 119
Query: 176 QINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNT 235
+ E + + A ++ + G+ L N + VFG ++ +
Sbjct: 120 K-RGIEERIQEEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFDY----EDK 174
Query: 236 EARRLSRLVEEGYDLLGKLNFS---------------DHLPW-----------LADFDLQ 269
E L R+ +LG F+ HLP L DF +
Sbjct: 175 EFLSLLRM------MLGSFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAK 228
Query: 270 KVRLRSSKLVPQ-----VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDI 324
KV L P ++ F+ R+ +E + T ++
Sbjct: 229 KVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLK-------------------NL 269
Query: 325 VAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVY 384
V + F GT+TV+ + + ++ HP++++KVH E+D+V+G++R D M Y
Sbjct: 270 VMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPY 329
Query: 385 LPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLK 444
AV+ E+ R P + A DT + +P GT + +++RDP +++P
Sbjct: 330 TEAVIHEIQRFGDMLP-MGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRD 388
Query: 445 FMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQ 504
F P+ F++ + SD PF G+R C G+GL + + T++ F++ +
Sbjct: 389 FNPQHFLDKKG-----QFKKSDA-FVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRF-K 441
Query: 505 SDYDPVDL 512
S P D+
Sbjct: 442 SPQSPKDI 449
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 193/467 (41%), Gaps = 41/467 (8%)
Query: 58 LYKKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVII 117
+ KK S P PGP LP IG+M L ++ V G +++
Sbjct: 1 MAKKTSSKGKLP-PGPTPLPIIGNM-LQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVV 58
Query: 118 TCSPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGF-APYGVYWRTLRRIAATHL--F 172
+ KE L N F+ R S S + +G + G W+ +RR + T L F
Sbjct: 59 FHGYEAVKEALIDNGEEFSGR--GNSPISQRITKGLGIISSNGKRWKEIRRFSLTTLRNF 116
Query: 173 CPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYS 232
+ S E + + A +V + S IL A N + VF +++ +
Sbjct: 117 GMGK-RSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQN 175
Query: 233 SNTEARRLSRLVEEGYDLLGK--LNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRII 290
T +R + E + +L + ++ P L D + K V ++ +
Sbjct: 176 FLTLMKRFN----ENFRILNSPWIQVCNNFPLLIDC-FPGTHNKVLKNVALTRSYIREKV 230
Query: 291 QEHRTTQTSLQRNS--DFVDVLL------SLSGPDRLSDHDIVAVLWEMIFRGTDTVAIL 342
+EH Q SL N+ DF+D L + + ++V + ++ GT+T +
Sbjct: 231 KEH---QASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTT 287
Query: 343 IEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVR---LHPPG 399
+ + L ++ HP++ +KV E+D V+GR R D M Y AVV E+ R L P G
Sbjct: 288 LRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTG 347
Query: 400 PLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMD 459
TDT +Y +P GTT M + +++ D + + +P F P F+ D +
Sbjct: 348 ----VPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFL-----DKN 398
Query: 460 ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSD 506
+ SD PF +G+R C G+GL + ++ T+L F D
Sbjct: 399 GNFKKSDY-FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVD 444
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 189/482 (39%), Gaps = 50/482 (10%)
Query: 60 KKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITC 119
KK S P PGP LP +G++ L + V LG V++ C
Sbjct: 3 KKTSSKGKLP-PGPSPLPVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLC 60
Query: 120 SPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIA-ATHLFCPKQ 176
D +E L + F+ R + + FA G WR LRR + AT
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMG 119
Query: 177 INSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCS-VFGRKYALLGYSSNT 235
S E + + A +V + G A +L + +N++CS VFG+++ Y
Sbjct: 120 KRSVEERIQEEARCLVEELRKSKG-ALLDNTLLFHSITSNIICSIVFGKRF---DYKDPV 175
Query: 236 EARRLS----------RLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRF 285
R L + ++L FS L + Q R + ++N F
Sbjct: 176 FLRLLDLFFQSFSLISSFSSQVFEL-----FSGFLKYFPGTHRQIYRN-----LQEINTF 225
Query: 286 VNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR------LSDHDIVAVLWEMIFRGTDTV 339
+ + +++HR T DF+DV L D+ +++ + + F GT+T
Sbjct: 226 IGQSVEKHRATLDP-SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETT 284
Query: 340 AILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPG 399
+ + + M+ +P + +V E++QV+G RP D M Y AV+ E+ RL G
Sbjct: 285 STTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL---G 341
Query: 400 PLLSWA--RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAAD 457
L+ + DT Y +P T + + + DP + P F P F++ A
Sbjct: 342 DLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGA- 400
Query: 458 MDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLR 517
+ + PF G+R C G+G+ + + T+L F + S P D+ R
Sbjct: 401 -----LKRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFS-IASPVPPEDIDLTPR 454
Query: 518 LS 519
S
Sbjct: 455 ES 456
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 189/482 (39%), Gaps = 50/482 (10%)
Query: 60 KKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITC 119
KK S P PGP LP +G++ L + V LG V++ C
Sbjct: 3 KKTSSKGKLP-PGPSPLPVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLC 60
Query: 120 SPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIA-ATHLFCPKQ 176
D +E L + F+ R + + FA G WR LRR + AT
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMG 119
Query: 177 INSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCS-VFGRKYALLGYSSNT 235
S E + + A +V + G A +L + +N++CS VFG+++ Y
Sbjct: 120 KRSVEERIQEEARCLVEELRKSKG-ALLDNTLLFHSITSNIICSIVFGKRF---DYKDPV 175
Query: 236 EARRLS----------RLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRF 285
R L + ++L FS L + Q R + ++N F
Sbjct: 176 FLRLLDLFFQSFSLISSFSSQVFEL-----FSGFLKYFPGTHRQIYRN-----LQEINTF 225
Query: 286 VNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR------LSDHDIVAVLWEMIFRGTDTV 339
+ + +++HR T DF+DV L D+ +++ + + F GT+T
Sbjct: 226 IGQSVEKHRATLDP-SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETT 284
Query: 340 AILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPG 399
+ + + M+ +P + +V E++QV+G RP D M Y AV+ E+ RL G
Sbjct: 285 STTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL---G 341
Query: 400 PLLSWA--RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAAD 457
L+ + DT Y +P T + + + DP + P F P F++ A
Sbjct: 342 DLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGA- 400
Query: 458 MDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLR 517
+ + PF G+R C G+G+ + + T+L F + S P D+ R
Sbjct: 401 -----LKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFS-IASPVPPEDIDLTPR 454
Query: 518 LS 519
S
Sbjct: 455 ES 456
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 188/482 (39%), Gaps = 50/482 (10%)
Query: 60 KKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITC 119
KK S P PGP LP +G++ L + V LG V++ C
Sbjct: 3 KKTSSKGKLP-PGPSPLPVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLC 60
Query: 120 SPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIA-ATHLFCPKQ 176
D +E L + F+ R + + FA G WR LRR + AT
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMG 119
Query: 177 INSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCS-VFGRKYALLGYSSNT 235
S E + + A +V + G A +L + +N++CS VFG+++ Y
Sbjct: 120 KRSVEERIQEEARCLVEELRKSKG-ALLDNTLLFHSITSNIICSIVFGKRF---DYKDPV 175
Query: 236 EARRLS----------RLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRF 285
R L + ++L F H P + + + ++N F
Sbjct: 176 FLRLLDLFFQSFSLISSFSSQVFELFS--GFLKHFPG--------THRQIYRNLQEINTF 225
Query: 286 VNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR------LSDHDIVAVLWEMIFRGTDTV 339
+ + +++HR T DF+DV L D+ +++ + + F GT+T
Sbjct: 226 IGQSVEKHRATLDP-SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETT 284
Query: 340 AILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPG 399
+ + + M+ +P + +V E++QV+G RP D M Y AV+ E+ RL G
Sbjct: 285 STTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL---G 341
Query: 400 PLLSWA--RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAAD 457
L+ + DT Y +P T + + + DP + P F P F++ A
Sbjct: 342 DLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGA- 400
Query: 458 MDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLR 517
+ + PF G+R C G+G+ + + T+L F + S P D+ R
Sbjct: 401 -----LKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFS-IASPVPPEDIDLTPR 454
Query: 518 LS 519
S
Sbjct: 455 ES 456
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 189/482 (39%), Gaps = 50/482 (10%)
Query: 60 KKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITC 119
KK S P PGP LP +G++ L + V LG V++ C
Sbjct: 3 KKTSSKGKLP-PGPSPLPVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLC 60
Query: 120 SPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIA-ATHLFCPKQ 176
D +E L + F+ R + + FA G WR LRR + AT
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMG 119
Query: 177 INSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCS-VFGRKYALLGYSSNT 235
S E + + A +V + G A +L + +N++CS VFG+++ Y
Sbjct: 120 KRSVEERIQEEARCLVEELRKSKG-ALLDNTLLFHSITSNIICSIVFGKRF---DYKDPV 175
Query: 236 EARRLS----------RLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRF 285
R L + ++L FS L + Q R + ++N F
Sbjct: 176 FLRLLDLFFQSFSLISSFSSQVFEL-----FSGFLKYFPGTHRQIYRN-----LQEINTF 225
Query: 286 VNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR------LSDHDIVAVLWEMIFRGTDTV 339
+ + +++HR T DF+DV L D+ +++ + + F GT+T
Sbjct: 226 IGQSVEKHRATLDP-SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETT 284
Query: 340 AILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPG 399
+ + + M+ +P + +V E++QV+G RP D M Y AV+ E+ RL G
Sbjct: 285 STTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL---G 341
Query: 400 PLLSWA--RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAAD 457
L+ + DT Y +P T + + + DP + P F P F++ A
Sbjct: 342 DLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGA- 400
Query: 458 MDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLR 517
+ + PF G+R C G+G+ + + T+L F + S P D+ R
Sbjct: 401 -----LKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFS-IASPVPPEDIDLTPR 454
Query: 518 LS 519
S
Sbjct: 455 ES 456
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 200/473 (42%), Gaps = 41/473 (8%)
Query: 58 LYKKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVII 117
+ KK S K PGP LP IG++ L ++ + V G R+++
Sbjct: 1 MAKKTSSGRGKLPPGPTPLPVIGNI-LQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVV 59
Query: 118 TCSPDVAKEILN--SSVFADR---PVKESAYSLMFNRAIGFA-PYGVYWRTLRRIAATHL 171
+V KE L F+ R P+ E A NR G G W+ +RR + L
Sbjct: 60 LHGYEVVKEALIDLGEEFSGRGHFPLAERA-----NRGFGIVFSNGKRWKEIRRFSLMTL 114
Query: 172 --FCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALL 229
F + S E + + A +V + S IL A N + +F +++
Sbjct: 115 RNFGMGK-RSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDY- 172
Query: 230 GYSSNTEARRLSRLVEEGYDLLGK--LNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVN 287
+ + L + E ++ + ++ P + D+ +KL+ + +
Sbjct: 173 ---KDQQFLNLMEKLNENIRIVSTPWIQICNNFPTIIDY----FPGTHNKLLKNLAFMES 225
Query: 288 RIIQEHRTTQTSLQRNS--DFVDVLL------SLSGPDRLSDHDIVAVLWEMIFRGTDTV 339
I+++ + Q S+ N+ DF+D L + + ++V +++ GT+T
Sbjct: 226 DILEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETT 285
Query: 340 AILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPG 399
+ + + L ++ HP++ +KV E+++VVGR+R D M Y AVV EV R
Sbjct: 286 STTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLI 345
Query: 400 PLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMD 459
P S D +Y +P GTT + ++ +++ D + + +P F P F++ E +
Sbjct: 346 P-TSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLD-EGGNFK 403
Query: 460 ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDL 512
S PF +G+R C G+GL + ++ +L F ++S DP DL
Sbjct: 404 KSNY-----FMPFSAGKRICVGEGLARMELFLFLTFILQNFN-LKSLIDPKDL 450
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 14/222 (6%)
Query: 285 FVNRIIQEHRTTQTSLQRNSDFVDVLLSLS--GPDRLSDHDIVAVLWEMIFRGTDTVAIL 342
V+ II E R S Q+ D + LL D + + +I + ++ G++T+A
Sbjct: 226 LVDEIIAERRA---SGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIAST 282
Query: 343 IEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLL 402
I W+L + HP+ ++ E++ V G RP+ D++ + + V+ E +RL P +L
Sbjct: 283 IMWLLQALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVL 341
Query: 403 SWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISL 462
+ R A+ ++ + Y +PAG + + +AI RDP+ Y D L+F P+R++ AA++
Sbjct: 342 T--RRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYA 399
Query: 463 MGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQ 504
M PF +G+R CP +A ++ L ++++ Q
Sbjct: 400 M------KPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQ 435
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 188/482 (39%), Gaps = 50/482 (10%)
Query: 60 KKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITC 119
KK S P PGP LP +G++ L + V LG V++ C
Sbjct: 3 KKTSSKGKLP-PGPSPLPVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLC 60
Query: 120 SPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIA-ATHLFCPKQ 176
D +E L + F+ R + + FA G WR LRR + AT
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMG 119
Query: 177 INSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCS-VFGRKYALLGYSSNT 235
S E + + A +V + G A +L + +N++CS VFG+++ Y
Sbjct: 120 KRSVEERIQEEARCLVEELRKSKG-ALLDNTLLFHSITSNIICSIVFGKRF---DYKDPV 175
Query: 236 EARRLS----------RLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRF 285
R L + ++L FS L + Q R + ++N F
Sbjct: 176 FLRLLDLFFQSFSLISSFSSQVFEL-----FSGFLKYFPGTHRQIYRN-----LQEINTF 225
Query: 286 VNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR------LSDHDIVAVLWEMIFRGTDTV 339
+ + +++HR T DF+DV L D+ +++ + + GT+T
Sbjct: 226 IGQSVEKHRATLDP-SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETT 284
Query: 340 AILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPG 399
+ + + M+ +P + +V E++QV+G RP D M Y AV+ E+ RL G
Sbjct: 285 STTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL---G 341
Query: 400 PLLSWA--RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAAD 457
L+ + DT Y +P T + + + DP + P F P F++ A
Sbjct: 342 DLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGA- 400
Query: 458 MDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLR 517
+ + PF G+R C G+G+ + + T+L F + S P D+ R
Sbjct: 401 -----LKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFS-IASPVPPEDIDLTPR 454
Query: 518 LS 519
S
Sbjct: 455 ES 456
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 153/355 (43%), Gaps = 29/355 (8%)
Query: 187 IASQMVSMIASYGGSA-FRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEAR--RLSRL 243
I Q+ MIA +G + L D ++ ++ G+K+ + R +L
Sbjct: 117 IEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSATLIGKKF-----RDQLDGRFAKLYHE 171
Query: 244 VEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRN 303
+E G D L ++ P+L ++ + LV V +N I T ++ +
Sbjct: 172 LERGTDPLAYVD-----PYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKS----D 222
Query: 304 SDFVDVLLSL---SGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKV 360
D +DVL+++ +G R S +I + M+F G T + W L ++ H D + V
Sbjct: 223 RDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 361 HSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVP 420
ELD++ G R ++ L+ + L V+KE +RLHP PL+ R+A + V + +
Sbjct: 283 IDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQGHRIH 340
Query: 421 AGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCP 480
G + R PE + DP F+P R+ P D + + PFG+GR C
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQED-----LLNRWTWIPFGAGRHRCV 395
Query: 481 GKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR 535
G + + LL E+++ + ++ ++ ++ P VR RRR
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRY--RRR 448
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 147/307 (47%), Gaps = 28/307 (9%)
Query: 216 NMMCSV-FGRKYALLGYSSNTEARRLSRLVEEGYDLLGK--LNFSDHLPWLADF--DLQK 270
N++CSV F ++ + E +L + E +LLG L ++ P L D+ + K
Sbjct: 158 NVICSVIFHNRFDY----KDEEFLKLMESLHENVELLGTPWLQVYNNFPALLDYFPGIHK 213
Query: 271 VRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNS--DFVDV-LLSLSGPDRL--SDHDIV 325
L+++ + F+ ++EH Q L N+ DF+D L+ + + L + +V
Sbjct: 214 TLLKNADYI---KNFIMEKVKEH---QKLLDVNNPRDFIDCFLIKMEQENNLEFTLESLV 267
Query: 326 AVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYL 385
+ ++ GT+T + + + L ++ HP++ ++V E+++V+GR R D M Y
Sbjct: 268 IAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYT 327
Query: 386 PAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKF 445
AV+ E+ R P + D +Y +P GT + ++ +++ D + + +P F
Sbjct: 328 DAVIHEIQRFIDLLP-TNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVF 386
Query: 446 MPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQS 505
P F+ D + SD PF +G+R C G+GL + ++ ++L FK +QS
Sbjct: 387 DPGHFL-----DESGNFKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSILQNFK-LQS 439
Query: 506 DYDPVDL 512
+P DL
Sbjct: 440 LVEPKDL 446
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 152/355 (42%), Gaps = 29/355 (8%)
Query: 187 IASQMVSMIASYGGSA-FRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEAR--RLSRL 243
I Q+ MIA +G + L D ++ + G+K+ + R +L
Sbjct: 117 IEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKF-----RDQLDGRFAKLYHE 171
Query: 244 VEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRN 303
+E G D L ++ P+L ++ + LV V +N I T ++ +
Sbjct: 172 LERGTDPLAYVD-----PYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKS----D 222
Query: 304 SDFVDVLLSL---SGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKV 360
D +DVL+++ +G R S +I + M+F G T + W L ++ H D + V
Sbjct: 223 RDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 361 HSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVP 420
ELD++ G R ++ L+ + L V+KE +RLHP PL+ R+A + V + +
Sbjct: 283 IDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQGHRIH 340
Query: 421 AGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCP 480
G + R PE + DP F+P R+ P D + + PFG+GR C
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQED-----LLNRWTWIPFGAGRHRCV 395
Query: 481 GKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR 535
G + + LL E+++ + ++ ++ ++ P VR RRR
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPACVRY--RRR 448
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 152/355 (42%), Gaps = 29/355 (8%)
Query: 187 IASQMVSMIASYGGSA-FRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEAR--RLSRL 243
I Q+ MIA +G + L D ++ + G+K+ + R +L
Sbjct: 117 IEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKF-----RDQLDGRFAKLYHE 171
Query: 244 VEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRN 303
+E G D L ++ P+L ++ + LV V +N I T ++ +
Sbjct: 172 LERGTDPLAYVD-----PYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKS----D 222
Query: 304 SDFVDVLLSL---SGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKV 360
D +DVL+++ +G R S +I + M+F G T + W L ++ H D + V
Sbjct: 223 RDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 361 HSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVP 420
ELD++ G R ++ L+ + L V+KE +RLHP PL+ R+A + V + +
Sbjct: 283 IDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQGHRIH 340
Query: 421 AGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCP 480
G + R PE + DP F+P R+ P D + + PFG+GR C
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQED-----LLNRWTWIPFGAGRHRCV 395
Query: 481 GKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR 535
G + + LL E+++ + ++ ++ ++ P VR RRR
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRY--RRR 448
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 152/355 (42%), Gaps = 29/355 (8%)
Query: 187 IASQMVSMIASYGGSA-FRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEAR--RLSRL 243
I Q+ MIA +G + L D ++ + G+K+ + R +L
Sbjct: 117 IEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKF-----RDQLDGRFAKLYHE 171
Query: 244 VEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRN 303
+E G D L ++ P+L ++ + LV V +N I T ++ +
Sbjct: 172 LERGTDPLAYVD-----PYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKS----D 222
Query: 304 SDFVDVLLSL---SGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKV 360
D +DVL+++ +G R S +I + M+F G T + W L ++ H D + V
Sbjct: 223 RDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 361 HSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVP 420
ELD++ G R ++ L+ + L V+KE +RLHP PL+ R+A + V + +
Sbjct: 283 IDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQGHRIH 340
Query: 421 AGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCP 480
G + R PE + DP F+P R+ P D + + PFG+GR C
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQED-----LLNRWTWIPFGAGRHRCV 395
Query: 481 GKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR 535
G + + LL E+++ + ++ ++ ++ P VR RRR
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRY--RRR 448
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 199/479 (41%), Gaps = 53/479 (11%)
Query: 58 LYKKGSKACSKPIPGPRGLPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVII 117
+ KK S K PGP LP IG++ L + + V G +++
Sbjct: 1 MAKKTSSGRGKLPPGPTPLPVIGNI-LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVV 59
Query: 118 TCSPDVAKEILN--SSVFADR---PVKESAYSLMFNRAIGFA-PYGVYWRTLRRIAATHL 171
+ KE L F+ R P+ E A NR G G W+ +RR + L
Sbjct: 60 LHGYEAVKEALIDLGEEFSGRGIFPLAERA-----NRGFGIVFSNGKKWKEIRRFSLMTL 114
Query: 172 --FCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALL 229
F + S E + + A +V + S IL A N++CS+ K
Sbjct: 115 RNFGMGK-RSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPC-NVICSIIFHK---- 168
Query: 230 GYSSNTEARRLSRLVEEGYDLLGKLNFSDHL---PWLA---DFD--LQKVRLRSSKLVPQ 281
R ++ +L+ KLN + + PW+ +F + +KL+
Sbjct: 169 ---------RFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKN 219
Query: 282 VNRFVNRIIQEHRTTQTSLQRNS--DFVDVLL------SLSGPDRLSDHDIVAVLWEMIF 333
V + I+++ + Q S+ N+ DF+D L + P + + ++
Sbjct: 220 VAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFG 279
Query: 334 RGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVV 393
GT+T + + + L ++ HP++ +KV E+++V+GR+R D M Y AVV EV
Sbjct: 280 AGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQ 339
Query: 394 RLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNP 453
R P S D +Y +P GTT ++++ +++ D + + +P F P F++
Sbjct: 340 RYIDLLP-TSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLD- 397
Query: 454 EAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDL 512
E + S PF +G+R C G+ L + ++ ++L F ++S DP +L
Sbjct: 398 EGGNFKKSKY-----FMPFSAGKRICVGEALAGMELFLFLTSILQNFN-LKSLVDPKNL 450
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 192/460 (41%), Gaps = 41/460 (8%)
Query: 71 PGPRGLPFIGSMSLMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPDVAKEILN- 129
PGP LP IG++ L + + V G +++ + KE L
Sbjct: 12 PGPTPLPVIGNI-LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 130 -SSVFADR---PVKESAYSLMFNRAIGFA-PYGVYWRTLRRIAATHL--FCPKQINSAEP 182
F+ R P+ E A NR G G W+ +RR + L F + S E
Sbjct: 71 LGEEFSGRGIFPLAERA-----NRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGK-RSIED 124
Query: 183 QRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSR 242
+ + A +V + S IL A N + +F +++ + + L
Sbjct: 125 RVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDY----KDQQFLNLME 180
Query: 243 LVEEGYDLLGK--LNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSL 300
+ E ++L + ++ P L D+ +KL+ V + I+++ + Q S+
Sbjct: 181 KLNENIEILSSPWIQVYNNFPALLDY----FPGTHNKLLKNVAFMKSYILEKVKEHQESM 236
Query: 301 QRNS--DFVDVLL------SLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVL 352
N+ DF+D L + P + + ++ GT+T + + + L ++
Sbjct: 237 DMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLK 296
Query: 353 HPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDT 412
HP++ +KV E+++V+GR+R D M Y AVV EV R P S D
Sbjct: 297 HPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLP-TSLPHAVTCDI 355
Query: 413 TVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPF 472
+Y +P GTT ++++ +++ D + + +P F P F++ E + S PF
Sbjct: 356 KFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLD-EGGNFKKSKY-----FMPF 409
Query: 473 GSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDL 512
+G+R C G+ L + ++ ++L F ++S DP +L
Sbjct: 410 SAGKRICVGEALAGMELFLFLTSILQNFN-LKSLVDPKNL 448
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 168/379 (44%), Gaps = 42/379 (11%)
Query: 142 AYSLMFNRAIG--FAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSM----I 195
AY + + IG F G W+ R + T + P+ I + P + ++ VS+ I
Sbjct: 90 AYHRYYQKPIGVLFKKSGT-WKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRI 148
Query: 196 ASYGGSAF--RLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGK 253
G F +++ L + ++ +FG + +L + N EA++ ++ Y +
Sbjct: 149 KQQGSGKFVGDIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKF---IDAVYKM--- 202
Query: 254 LNFSDHLPWLADFDLQKVRLRSSKL----VPQVNRFVNRIIQEHRTTQTSLQRNSDFVD- 308
F +P L + + RL +K V + N+ + L+R ++F +
Sbjct: 203 --FHTSVP-LLNVPPELYRLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLRRKTEFRNY 259
Query: 309 --VLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQ 366
+L L +++ D+ A + EM+ G +T ++ ++W L M ++Q + E
Sbjct: 260 PGILYCLLKSEKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREE--- 316
Query: 367 VVGRSRPLTESDLQSMVY----LPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAG 422
V +R E D+ M+ L A +KE +RLHP ++ R +D + Y +PA
Sbjct: 317 -VLNARRQAEGDISKMLQMVPLLKASIKETLRLHPIS--VTLQRYPESDLVLQDYLIPAK 373
Query: 423 TTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGK 482
T V I+A+ RDP ++ P KF P R+++ + + +G FG G R C G+
Sbjct: 374 TLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLIHFRNLG-------FGWGVRQCVGR 426
Query: 483 GLGLATVSFWVGTLLHEFK 501
+ ++ ++ +L FK
Sbjct: 427 RIAELEMTLFLIHILENFK 445
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 187/462 (40%), Gaps = 43/462 (9%)
Query: 70 IPGPRGLPFIGSMSLM---TNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPDVAKE 126
+PGP P +GS+ + L + ++ LG + SP + +
Sbjct: 26 LPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEA 85
Query: 127 ILNSSV-----FADRPVKESAYSLMFNRAIGFAPY-GVYWRTLRRIAATHLFCPKQINSA 180
+ + +P K AY N A G G W+ +R L P +I
Sbjct: 86 LYRTESAHPQRLEIKPWK--AYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKL 143
Query: 181 EPQRSDIASQMVSMIASYGGSAFRLRDI---LKPASLNNMMCSVFGRKYALLGYSSNTEA 237
+ + +++ + + + R+ D+ L S ++ ++ +++ LL + EA
Sbjct: 144 DKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEA 203
Query: 238 RRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFV-NRIIQ----- 291
++ GK+ + +L K R + V Q + + I +
Sbjct: 204 LTFITAIKTMMSTFGKM-------MVTPVELHK---RLNTKVWQAHTLAWDTIFKSVKPC 253
Query: 292 -EHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARM 350
++R + S Q +DF L + D LS ++ A + E+ +T A + WIL +
Sbjct: 254 IDNRLQRYSQQPGADF---LCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNL 310
Query: 351 VLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAIT 410
+P Q ++ E+ V+ ++ DL++M YL A +KE +RL P P + R
Sbjct: 311 SRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTT--RTLDK 368
Query: 411 DTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLA 470
T + Y +P GT +N + + + D KF PER++ E + +
Sbjct: 369 PTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINPFAHL------- 421
Query: 471 PFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDL 512
PFG G+R C G+ L + + ++ ++ V +D +PV++
Sbjct: 422 PFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEM 463
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 165/409 (40%), Gaps = 29/409 (7%)
Query: 105 VMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKESAYSLMFNRAIG--FAPYGVYWRT 162
V LG V++ C + +E L A + A F R G FA G W+
Sbjct: 46 VFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFAN-GNRWKV 104
Query: 163 LRRIAATHL--FCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCS 220
LRR + T + F + S E + + A ++ + G+ + + + N +
Sbjct: 105 LRRFSVTTMRDFGMGK-RSVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITANIICSI 163
Query: 221 VFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADF--DLQKVRLRSSKL 278
VFG+++ + + E ++ L + + L+ + F + F + K
Sbjct: 164 VFGKRF----HYQDQEFLKMLNLFYQTFSLISSV-FGQLFELFSGFLKHFPGAHRQVYKN 218
Query: 279 VPQVNRFVNRIIQEHRTT-QTSLQRNSDFVDVLL------SLSGPDRLSDHDIVAVLWEM 331
+ ++N ++ +++HR T S R D +D L + S ++ +
Sbjct: 219 LQEINAYIGHSVEKHRETLDPSAPR--DLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSL 276
Query: 332 IFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKE 391
F GT+T + + + M+ +P + +V+ E++QV+G RP D M Y AV+ E
Sbjct: 277 FFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYE 336
Query: 392 VVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFV 451
+ R P + + T+ Y +P T + + + DP + P F P+ F+
Sbjct: 337 IQRFSDLLP-MGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFL 395
Query: 452 NPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
+ A + PF G+R C G+G+ A + + T+L F
Sbjct: 396 DANGA------LKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNF 438
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 155/371 (41%), Gaps = 25/371 (6%)
Query: 142 AYSLMFNRAIG-FAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMI----- 195
AY + R IG W+ R + P+ + P ++ VS++
Sbjct: 85 AYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIK 144
Query: 196 -ASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDL-LGK 253
A G + + D L + ++ +FG + +L N EA+R + + + +
Sbjct: 145 KAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPM 204
Query: 254 LNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNS---DFVDVL 310
LN L F L + + + F I Q+ S D+ +L
Sbjct: 205 LNLPPDL-----FRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGIL 259
Query: 311 LSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGR 370
L G ++S DI A + EM+ G DT ++ ++W L M + +Q + +E+ +
Sbjct: 260 YRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQ 319
Query: 371 SRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIW 430
++ + LQ + L A +KE +RLHP L R + D + Y +PA T V I+
Sbjct: 320 AQGDMATMLQLVPLLKASIKETLRLHPISVTLQ--RYLVNDLVLRDYMIPAKTLVQVAIY 377
Query: 431 AIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVS 490
A+ R+P + DP F P R++ + D +I+ R FG G R C G+ + ++
Sbjct: 378 ALGREPTFFFDPENFDPTRWL---SKDKNITY----FRNLGFGWGVRQCLGRRIAELEMT 430
Query: 491 FWVGTLLHEFK 501
++ +L F+
Sbjct: 431 IFLINMLENFR 441
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 158/369 (42%), Gaps = 21/369 (5%)
Query: 142 AYSLMFNRAIG-FAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMI----- 195
AY + R IG W+ R + P+ + P ++ VS++
Sbjct: 88 AYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIK 147
Query: 196 -ASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDL-LGK 253
A G + + D L + ++ +FG + +L N EA+R + + + +
Sbjct: 148 KAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPM 207
Query: 254 LNFSDHLPWLADFDLQKVRLRSSKLV-PQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLS 312
LN L L K + + ++ + + + E R + + D+ +L
Sbjct: 208 LNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSV---HHDYRGILYR 264
Query: 313 LSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSR 372
L G ++S DI A + EM+ G DT ++ ++W L M + +Q + +E+ +++
Sbjct: 265 LLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQ 324
Query: 373 PLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAI 432
+ LQ + L A +KE +RLHP L R + D + Y +PA T V I+A+
Sbjct: 325 GDMATMLQLVPLLKASIKETLRLHPISVTLQ--RYLVNDLVLRDYMIPAKTLVQVAIYAL 382
Query: 433 MRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFW 492
R+P + DP F P R++ + D +I+ R FG G R C G+ + ++ +
Sbjct: 383 GREPTFFFDPENFDPTRWL---SKDKNITY----FRNLGFGWGVRQCLGRRIAELEMTIF 435
Query: 493 VGTLLHEFK 501
+ +L F+
Sbjct: 436 LINMLENFR 444
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 176/436 (40%), Gaps = 47/436 (10%)
Query: 84 LMTNLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPDVAKE--ILNSSVFADRPVKES 141
L NLP H L R+ LG V++ S +E I FA RP +
Sbjct: 41 LQPNLPIHLLSLTQKLGPVYRL---RLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP-QIP 96
Query: 142 AYSLMFNRA--IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYG 199
+Y L+ R I Y + W+ +++ + L + +S EP + + +
Sbjct: 97 SYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR-SSMEPWVDQLTQEFCERMRVQA 155
Query: 200 GSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLG-----KL 254
G+ I K SL + CS+ Y G +T V+ DL+ +
Sbjct: 156 GAPV---TIQKEFSL--LTCSIIC--YLTFGNKEDTLVHAFHDCVQ---DLMKTWDHWSI 205
Query: 255 NFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLS-- 312
D +P+L F + R + + + V + ++ H+ + + Q D D +L
Sbjct: 206 QILDMVPFLRFFPNPGL-WRLKQAIENRDHMVEKQLRRHKESMVAGQWR-DMTDYMLQGV 263
Query: 313 -----LSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQV 367
GP +L + + + ++ GT+T A + W +A ++ HP+IQ ++ ELD+
Sbjct: 264 GRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRE 323
Query: 368 VGRSRP---LTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTT 424
+G +T D + L A + EV+RL P P L+ +++ Y +P G
Sbjct: 324 LGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVP-LALPHRTTRPSSIFGYDIPEGMV 382
Query: 425 AMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGL 484
+ N+ D ++ P +F P+RF+ P G++ FG G R C G+ L
Sbjct: 383 VIPNLQGAHLDETVWEQPHEFRPDRFLEP----------GANPSALAFGCGARVCLGESL 432
Query: 485 GLATVSFWVGTLLHEF 500
+ + LL F
Sbjct: 433 ARLELFVVLARLLQAF 448
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 176/406 (43%), Gaps = 38/406 (9%)
Query: 112 ETRVIITCSPDVAKEILNSSVFADRPVKESAYSLMFNRAI---GFAPYGVY--WRTLRRI 166
+T VI+T SP+ K+ L S+ + A +F + G Y W RR+
Sbjct: 34 KTSVIVT-SPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRV 92
Query: 167 AATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNNMMCSVFGR 224
F + S ++ A Q+V ++ + G + ++D+L +++ + + FG
Sbjct: 93 IDLA-FSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGM 151
Query: 225 KYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNR 284
+ ++L + + +L+ EG + + LP L++VR S + + QV R
Sbjct: 152 ETSML-LGAQKPLSQAVKLMLEGITA-SRNTLAKFLPGKRK-QLREVR-ESIRFLRQVGR 207
Query: 285 FVNRIIQEHRTTQTSLQRNSDF-VDVLLSLSGPDR--LSDHDIVAVLWEMIFRGTDTVAI 341
+Q R +L+R + D+L + + D ++ G +T A
Sbjct: 208 ---DWVQRRRE---ALKRGEEVPADILTQILKAEEGAQDDEGLLDNFVTFFIAGHETSAN 261
Query: 342 LIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPL 401
+ + + + P+I +++ +E+D+V+G R L DL + YL V+KE +RL+PP
Sbjct: 262 HLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPP--- 318
Query: 402 LSWA--RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMD 459
+W RL +T +D VP T + + + + R + DPL F P+RF P A
Sbjct: 319 -AWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF-GPGAPKPR 376
Query: 460 ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLH--EFKWV 503
+ PF G R+C G+ V + LL EF+ V
Sbjct: 377 FTYF-------PFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLV 415
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 26/287 (9%)
Query: 240 LSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTS 299
+ R ++E + L + N D +D K + + V +N V++II + + S
Sbjct: 178 MVRALDEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDLVDKIIADRKA---S 227
Query: 300 LQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDI 356
+++ D + +L+ P+ L D +I + + G +T + L+ + L +V +P +
Sbjct: 228 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 287
Query: 357 QSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVD- 415
K E +V+ P + ++ + Y+ V+ E +RL P P S A DT +
Sbjct: 288 LQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGG 344
Query: 416 HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAADMDISLMGSDLRLAPFGS 474
Y + G MV I + RD I+ D ++ F PERF NP A PFG+
Sbjct: 345 EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA--------FKPFGN 396
Query: 475 GRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCE 521
G+R CPG+ L + +G +L F + +D+ E L L E
Sbjct: 397 GQRACPGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 331 MIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVK 390
++F G +T+ + + H DI+ +V E +++ S+ LT L+ M YL V++
Sbjct: 251 LLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQ-LSQELTAETLKKMPYLDQVLQ 309
Query: 391 EVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERF 450
EV+RL PP + R I D +H P G I DP++Y DP KF PERF
Sbjct: 310 EVLRLIPP--VGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERF 367
Query: 451 VNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPV 510
+A + PFG G R C GK + + L+ +F W +
Sbjct: 368 TPDGSATHNPPFAH-----VPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNL 422
Query: 511 DLSEVLRLSCEMKNPLTVRVHA 532
+L V+ S K+ L V++H+
Sbjct: 423 EL--VVTPSPRPKDNLRVKLHS 442
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + KV E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + +G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C GK L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + +G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 213 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 269
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 270 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 328
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 329 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 386
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 387 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
Query: 517 RLSCE 521
L E
Sbjct: 439 TLKPE 443
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 213 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 269
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 270 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 328
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 329 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 386
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 387 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
Query: 517 RLSCE 521
L E
Sbjct: 439 TLKPE 443
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 215 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 271
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 272 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 330
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 331 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 388
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 389 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 440
Query: 517 RLSCE 521
L E
Sbjct: 441 TLKPE 445
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 215 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 271
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 272 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 330
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 331 SPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 388
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 389 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 440
Query: 517 RLSCE 521
L E
Sbjct: 441 TLKPE 445
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 26/287 (9%)
Query: 240 LSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTS 299
+ R ++E + L + N D +D K + + V +N V++II + + S
Sbjct: 183 MVRALDEAMNKLQRTNPDD-----PAYDENKRQFQEDIKV--MNDLVDKIIADRKA---S 232
Query: 300 LQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDI 356
+++ D + +L P+ L D +I + + G +T + L+ + L +V +P +
Sbjct: 233 GEQSDDLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHV 292
Query: 357 QSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVD- 415
K E +V+ P + ++ + Y+ V+ E +RL P P S A DT +
Sbjct: 293 LQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGG 349
Query: 416 HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAADMDISLMGSDLRLAPFGS 474
Y + G MV I + RD I+ D ++ F PERF NP A PFG+
Sbjct: 350 EYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA--------FKPFGN 401
Query: 475 GRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCE 521
G+R C G+ L + +G +L F + +D+ E L L E
Sbjct: 402 GQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 448
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 213 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 269
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 270 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 328
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 329 APPFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 386
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 387 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
Query: 517 RLSCE 521
L E
Sbjct: 439 TLKPE 443
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +
Sbjct: 213 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEA 269
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 270 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 328
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
GP S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 329 GPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 386
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 387 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
Query: 517 RLSCE 521
L E
Sbjct: 439 VLKPE 443
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEA 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
GP S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 GPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 VLKPE 442
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
P+G+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 215 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 271
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 272 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 330
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 331 VPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 388
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 389 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 440
Query: 517 RLSCE 521
L E
Sbjct: 441 TLKPE 445
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR--LSDHDIVAVLWEMIFRGTDT 338
++ + IQ+ R +Q ++ D + LL + D L+D ++ +L ++ G T
Sbjct: 211 EIKDIFYKAIQKRRQSQ---EKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHT 267
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRS-RPLTESDLQSMVYLPAVVKEVVRLHP 397
+ W+ + +Q K + E V G + PLT L+ + L +KE +RL P
Sbjct: 268 SSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRP 327
Query: 398 PGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAAD 457
P ++ R+A T TV Y +P G V+ R + + + L F P+R++ A
Sbjct: 328 P--IMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPAS 385
Query: 458 MDISLMGSDLRLAPFGSGRRTCPGKGLGLATV-SFWVGTL-LHEFKWVQSDYDPVDLSEV 515
G PFG+GR C G+ + + W L L+EF + + V+ + +
Sbjct: 386 ------GEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTM 439
Query: 516 L 516
+
Sbjct: 440 I 440
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G ++
Sbjct: 213 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHES 269
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 270 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 328
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 329 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 386
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 387 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
Query: 517 RLSCE 521
L E
Sbjct: 439 LLKPE 443
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEN 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G ++
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHES 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 LLKPE 442
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEA 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEA 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEA 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
P+G+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
P G+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +T
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
P G+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G ++
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHES 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETQ 437
Query: 517 RLSCE 521
L E
Sbjct: 438 LLKPE 442
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 19/243 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L P+ L D +I + + G +T
Sbjct: 213 MNDLVDKIIADRKA---SGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHET 269
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P + K E +V+ P + ++ + Y+ V+ E +R+ P
Sbjct: 270 TSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRIWPT 328
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD ++ D ++ F PERF NP A
Sbjct: 329 APAFSL--YAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAI 386
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 387 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIEETL 438
Query: 517 RLS 519
L
Sbjct: 439 TLK 441
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +
Sbjct: 213 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEA 269
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 270 TSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVP-SHKQVKQLKYVGMVLNEALRLWPT 328
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD ++ D ++ F PERF NP A
Sbjct: 329 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAI 386
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 387 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
Query: 517 RLSCE 521
L E
Sbjct: 439 TLKPE 443
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 17/230 (7%)
Query: 274 RSSKLVPQVNRFVNRIIQEHR---TTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWE 330
+ K V + + +I E R +T+ L+ DF L+ L+ ++ + E
Sbjct: 243 KYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDLTRENVNQCILE 302
Query: 331 MIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVK 390
M+ DT+++ + ++L + HP+++ + E+ V+G R + D+Q + + +
Sbjct: 303 MLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVMENFIY 361
Query: 391 EVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERF 450
E +R P L+ R A+ D +D Y V GT ++NI + R E + P +F E F
Sbjct: 362 ESMRYQPVVDLV--MRKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPNEFTLENF 418
Query: 451 VNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
A ++ PFG G R C GK + + + + TLL F
Sbjct: 419 ----AKNVPYRY------FQPFGFGPRGCAGKYIAMVMMKAILVTLLRRF 458
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 19/245 (7%)
Query: 282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDT 338
+N V++II + + S +++ D + +L+ P+ L D +I + + G +
Sbjct: 212 MNDLVDKIIADRKA---SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEA 268
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
+ L+ + L +V +P K E +V+ P + ++ + Y+ V+ E +RL P
Sbjct: 269 TSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT 327
Query: 399 GPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLK-FMPERFVNPEAA 456
P S A DT + Y + G MV I + RD I+ D ++ F PERF NP A
Sbjct: 328 APAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVL 516
PFG+G+R C G+ L + +G +L F + +D+ E L
Sbjct: 386 PQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
Query: 517 RLSCE 521
L E
Sbjct: 438 TLKPE 442
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 286 VNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEW 345
+ +I QE + R + ++ L LS I A E+ DT A +
Sbjct: 245 IQKIYQE-----LAFNRPQHYTGIVAELLLKAELSLEAIKANSMELTAGSVDTTAFPLLM 299
Query: 346 ILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLP---AVVKEVVRLHPPGPLL 402
L + +PD+Q + E + + ++E ++ LP A +KE +RL+P G L
Sbjct: 300 TLFELARNPDVQQILRQE---SLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFL 356
Query: 403 SWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISL 462
R+ +D + +YH+PAGT V ++++ R+ ++ P ++ P+R+ +DI
Sbjct: 357 E--RVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRW-------LDIRG 407
Query: 463 MGSDLRLAPFGSGRRTCPGK 482
G + PFG G R C G+
Sbjct: 408 SGRNFHHVPFGFGMRQCLGR 427
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 26/250 (10%)
Query: 260 LPWLADFDL-QKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRN-SDFVDVLLSLSGPD 317
+PWL L Q R R ++ ++ + + II + S N SD + LL D
Sbjct: 186 MPWLLRLPLPQSARCREARA--ELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRD 243
Query: 318 --RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQS---KVHSELDQVVGRSR 372
R+S H++ ++ +F G T I W + + +HP + K+H E+D+ +
Sbjct: 244 GTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL-MHPKNKKWLDKLHKEIDEFPAQLN 302
Query: 373 PLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAI 432
++ + M + V+E +R PP LL R+ + V Y VP G +
Sbjct: 303 --YDNVMDEMPFAERCVRESIRRDPP--LLMVMRMVKAEVKVGSYVVPKGDIIACSPLLS 358
Query: 433 MRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFW 492
D E + +P + PER +D + +G FG+G C G+ L V
Sbjct: 359 HHDEEAFPNPRLWDPER-----DEKVDGAFIG-------FGAGVHKCIGQKFALLQVKTI 406
Query: 493 VGTLLHEFKW 502
+ T E+ +
Sbjct: 407 LATAFREYDF 416
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 26/250 (10%)
Query: 260 LPWLADFDL-QKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRN-SDFVDVLLSLSGPD 317
+PWL L Q R R ++ ++ + + II + S N SD + LL D
Sbjct: 192 MPWLLRLPLPQSARCREARA--ELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRD 249
Query: 318 --RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQS---KVHSELDQVVGRSR 372
R+S H++ ++ +F G T I W + + +HP + K+H E+D+ +
Sbjct: 250 GTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL-MHPKNKKWLDKLHKEIDEFPAQLN 308
Query: 373 PLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAI 432
++ + M + V+E +R PP LL R+ + V Y VP G +
Sbjct: 309 --YDNVMDEMPFAERCVRESIRRDPP--LLMVMRMVKAEVKVGSYVVPKGDIIACSPLLS 364
Query: 433 MRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFW 492
D E + +P + PER +D + +G FG+G C G+ L V
Sbjct: 365 HHDEEAFPNPRLWDPER-----DEKVDGAFIG-------FGAGVHKCIGQKFALLQVKTI 412
Query: 493 VGTLLHEFKW 502
+ T E+ +
Sbjct: 413 LATAFREYDF 422
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 26/250 (10%)
Query: 260 LPWLADFDL-QKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRN-SDFVDVLLSLSGPD 317
+PWL L Q R R ++ ++ + + II + S N SD + LL D
Sbjct: 201 MPWLLRLPLPQSARCREARA--ELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRD 258
Query: 318 --RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQS---KVHSELDQVVGRSR 372
R+S H++ ++ +F G T I W + + +HP + K+H E+D+ +
Sbjct: 259 GTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL-MHPKNKKWLDKLHKEIDEFPAQLN 317
Query: 373 PLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAI 432
++ + M + V+E +R PP LL R+ + V Y VP G +
Sbjct: 318 --YDNVMDEMPFAERCVRESIRRDPP--LLMVMRMVKAEVKVGSYVVPKGDIIACSPLLS 373
Query: 433 MRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFW 492
D E + +P + PER +D + +G FG+G C G+ L V
Sbjct: 374 HHDEEAFPNPRLWDPER-----DEKVDGAFIG-------FGAGVHKCIGQKFALLQVKTI 421
Query: 493 VGTLLHEFKW 502
+ T E+ +
Sbjct: 422 LATAFREYDF 431
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 27/251 (10%)
Query: 260 LPWLADFDL-QKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGP-- 316
LPW+ L Q R R ++ ++ ++ II + Q++++ D+L L G
Sbjct: 187 LPWILKLPLPQSYRCRDARA--ELQDILSEIIIAREKEEA--QKDTNTSDLLAGLLGAVY 242
Query: 317 ---DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQ--SKVHSELDQVVGRS 371
R+S H++ ++ +F G T I W L ++ + + +K+H E+D+ +
Sbjct: 243 RDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQL 302
Query: 372 RPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWA 431
++ ++ M + +E +R PP L+ R + V Y VP G +
Sbjct: 303 N--YDNVMEEMPFAEQCARESIRRDPP--LVMLMRKVLKPVQVGKYVVPEGDIIACSPLL 358
Query: 432 IMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSF 491
+D E + +P ++ PER ++ L+ D FG+G C G+ GL V
Sbjct: 359 SHQDEEAFPNPREWNPER---------NMKLV--DGAFCGFGAGVHKCIGEKFGLLQVKT 407
Query: 492 WVGTLLHEFKW 502
+ T+L ++ +
Sbjct: 408 VLATVLRDYDF 418
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 20/188 (10%)
Query: 345 WILARMVLHPDIQSKVHSELDQVV----------GRSRPLTESDLQSMVYLPAVVKEVVR 394
W L +M+ +P+ E+ + + G L++++L + L +++KE +R
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 395 LHPPGPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNP 453
L + A+ T D Y++ + + DPEIY DPL F +R+++
Sbjct: 339 LSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLD- 397
Query: 454 EAADMDISLMGSDLRLA----PFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWV----QS 505
E + + L+L PFGSG CPG+ + + ++ +L F+ Q+
Sbjct: 398 ENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQA 457
Query: 506 DYDPVDLS 513
P+D S
Sbjct: 458 KCPPLDQS 465
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 20/188 (10%)
Query: 345 WILARMVLHPDIQSKVHSELDQVV----------GRSRPLTESDLQSMVYLPAVVKEVVR 394
W L +M+ +P+ E+ + + G L++++L + L +++KE +R
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 395 LHPPGPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNP 453
L + A+ T D Y++ + + DPEIY DPL F +R+++
Sbjct: 339 LSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLD- 397
Query: 454 EAADMDISLMGSDLRLA----PFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWV----QS 505
E + + L+L PFGSG CPG+ + + ++ +L F+ Q+
Sbjct: 398 ENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQA 457
Query: 506 DYDPVDLS 513
P+D S
Sbjct: 458 KCPPLDQS 465
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 389 VKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPE 448
V+EV R +P GP L L D ++ GT+ +++++ DP ++ P +F PE
Sbjct: 280 VQEVRRYYPFGPFL--GALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPE 337
Query: 449 RFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKW 502
RF E D+ G G R CPG+G+ + + + L+H+ ++
Sbjct: 338 RFAEREENLFDMIPQGG----GHAEKGHR-CPGEGITIEVMKASLDFLVHQIEY 386
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 18/203 (8%)
Query: 303 NSDFVDVLLSLSGPDR--LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKV 360
SD + LLS D +S H++ ++ +F G T +I W + + +HP +
Sbjct: 231 TSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHL 289
Query: 361 HSELDQVVGRSRPLTESD-LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHV 419
+ ++ L ++ + M + +E +R PP LL R + D V Y V
Sbjct: 290 EALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPP--LLMLMRKVMADVKVGSYVV 347
Query: 420 PAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTC 479
P G + D E + +P ++ PER E A +G FG+G C
Sbjct: 348 PKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGA-----FIG-------FGAGVHKC 395
Query: 480 PGKGLGLATVSFWVGTLLHEFKW 502
G+ GL V + T + +
Sbjct: 396 IGQKFGLLQVKTILATAFRSYDF 418
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 18/203 (8%)
Query: 303 NSDFVDVLLSLSGPDR--LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKV 360
SD + LLS D +S H++ ++ +F G T +I W + + +HP +
Sbjct: 230 TSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHL 288
Query: 361 HSELDQVVGRSRPLTESD-LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHV 419
+ ++ L ++ + M + +E +R PP LL R + D V Y V
Sbjct: 289 EALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPP--LLMLMRKVMADVKVGSYVV 346
Query: 420 PAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTC 479
P G + D E + +P ++ PER E A +G FG+G C
Sbjct: 347 PKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGA-----FIG-------FGAGVHKC 394
Query: 480 PGKGLGLATVSFWVGTLLHEFKW 502
G+ GL V + T + +
Sbjct: 395 IGQKFGLLQVKTILATAFRSYDF 417
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 18/203 (8%)
Query: 303 NSDFVDVLLSLSGPDR--LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKV 360
SD + LLS D +S H++ ++ +F G T +I W + + +HP +
Sbjct: 232 TSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHL 290
Query: 361 HSELDQVVGRSRPLTESD-LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHV 419
+ ++ L ++ + M + +E +R PP LL R + D V Y V
Sbjct: 291 EALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPP--LLMLMRKVMADVKVGSYVV 348
Query: 420 PAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTC 479
P G + D E + +P ++ PER E A +G FG+G C
Sbjct: 349 PKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGA-----FIG-------FGAGVHKC 396
Query: 480 PGKGLGLATVSFWVGTLLHEFKW 502
G+ GL V + T + +
Sbjct: 397 IGQKFGLLQVKTILATAFRSYDF 419
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 18/203 (8%)
Query: 303 NSDFVDVLLSLSGPDR--LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKV 360
SD + LLS D +S H++ ++ +F G T +I W + + +HP +
Sbjct: 231 TSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHL 289
Query: 361 HSELDQVVGRSRPLTESD-LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHV 419
+ ++ L ++ + M + +E +R PP LL R + D V Y V
Sbjct: 290 EALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPP--LLMLMRKVMADVKVGSYVV 347
Query: 420 PAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTC 479
P G + D E + +P ++ PER E A +G FG+G C
Sbjct: 348 PKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGA-----FIG-------FGAGVHKC 395
Query: 480 PGKGLGLATVSFWVGTLLHEFKW 502
G+ GL V + T + +
Sbjct: 396 IGQKFGLLQVKTILATAFRSYDF 418
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 18/203 (8%)
Query: 303 NSDFVDVLLSLSGPDR--LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKV 360
SD + LLS D +S H++ ++ +F G T +I W + + +HP +
Sbjct: 244 TSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHL 302
Query: 361 HSELDQVVGRSRPLTESD-LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHV 419
+ ++ L ++ + M + +E +R PP LL R + D V Y V
Sbjct: 303 EALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPP--LLMLMRKVMADVKVGSYVV 360
Query: 420 PAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTC 479
P G + D E + +P ++ PER E A +G FG+G C
Sbjct: 361 PKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGA-----FIG-------FGAGVHKC 408
Query: 480 PGKGLGLATVSFWVGTLLHEFKW 502
G+ GL V + T + +
Sbjct: 409 IGQKFGLLQVKTILATAFRSYDF 431
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 18/203 (8%)
Query: 303 NSDFVDVLLSLSGPDR--LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKV 360
SD + LLS D +S H++ ++ +F G T +I W + + +HP +
Sbjct: 244 TSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHL 302
Query: 361 HSELDQVVGRSRPLTESD-LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHV 419
+ ++ L ++ + M + +E +R PP LL R + D V Y V
Sbjct: 303 EALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPP--LLMLMRKVMADVKVGSYVV 360
Query: 420 PAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTC 479
P G + D E + +P ++ PER E A +G FG+G C
Sbjct: 361 PKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGA-----FIG-------FGAGVHKC 408
Query: 480 PGKGLGLATVSFWVGTLLHEFKW 502
G+ GL V + T + +
Sbjct: 409 IGQKFGLLQVKTILATAFRSYDF 431
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 89/229 (38%), Gaps = 31/229 (13%)
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD-RLSDHDIVAVLWEMIFRGTDTV 339
Q+++++ +I+E R SD + +L + LSD DI+A++ ++ T+
Sbjct: 220 QLSQYLMPVIKERRVNP-----GSDLISILCTSEYEGMALSDKDILALILNVLLAATEPA 274
Query: 340 AILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPG 399
+ ++ ++ +P+ + V L +P + E +R PP
Sbjct: 275 DKTLALMIYHLLNNPEQMNDV------------------LADRSLVPRAIAETLRYKPPV 316
Query: 400 PLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMD 459
L+ R DT V + T I A RDPE + P F R E +
Sbjct: 317 QLI--PRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR----EDLGIK 370
Query: 460 ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYD 508
+ G+ LA FGSG C G + +L + + ++ + D
Sbjct: 371 SAFSGAARHLA-FGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEED 418
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 387 AVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFM 446
A++ E+VR+ PP LS+ R D + + AG+ I A RDPE++ DP F
Sbjct: 268 AIINEMVRMDPPQ--LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 325
Query: 447 PERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSD 506
R P AA ++S FG G +C G+ + A + L ++ ++
Sbjct: 326 HTR---PPAASRNLS----------FGLGPHSCAGQIISRAEATTVFAVLAERYERIELA 372
Query: 507 YDPV 510
+P
Sbjct: 373 EEPT 376
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 387 AVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFM 446
A++ E+VR+ PP LS+ R D + + AG+ I A RDPE++ DP F
Sbjct: 266 AIINEMVRMDPPQ--LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 323
Query: 447 PERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSD 506
R P AA ++S FG G +C G+ + A + L ++ ++
Sbjct: 324 HTR---PPAASRNLS----------FGLGPHSCAGQIISRAEATTVFAVLAERYERIELA 370
Query: 507 YDPV 510
+P
Sbjct: 371 EEPT 374
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Query: 387 AVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFM 446
AV++E +R PP L+S R A D T+ + VP G T ++ + A RDP I P +F
Sbjct: 291 AVIEETMRYDPPVQLVS--RYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFD 348
Query: 447 PERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSD 506
P+R + +R FG G C G L + + L F +
Sbjct: 349 PDR---------------AQIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLS 393
Query: 507 YDP 509
+P
Sbjct: 394 GEP 396
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 16/143 (11%)
Query: 371 SRPLTESDLQSMVYL-PAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNI 429
SRP L+S + P + E++R P + +R+A+ D + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 430 WAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATV 489
A RDPE++ DP + ER NP + FG G CPG L
Sbjct: 319 LAANRDPEVFPDPDRIDFERSPNPHVS---------------FGFGPHYCPGGMLARLES 363
Query: 490 SFWVGTLLHEFKWVQSDYDPVDL 512
V +L ++ P D+
Sbjct: 364 ELLVDAVLDRVPGLKLAVAPEDV 386
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 16/143 (11%)
Query: 371 SRPLTESDLQSMVYL-PAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNI 429
SRP L+S + P + E++R P + +R+A+ D + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 430 WAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATV 489
A RDPE++ DP + ER NP + FG G CPG L
Sbjct: 319 LAANRDPEVFPDPDRIDFERSPNPHVS---------------FGFGPHYCPGGMLARLES 363
Query: 490 SFWVGTLLHEFKWVQSDYDPVDL 512
V +L ++ P D+
Sbjct: 364 ELLVDAVLDRVPGLKLAVAPEDV 386
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 16/143 (11%)
Query: 371 SRPLTESDLQSMVYL-PAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNI 429
SRP L+S + P + E++R P + +R+A+ D + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 430 WAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATV 489
A RDPE++ DP + ER NP + FG G CPG L
Sbjct: 319 LAANRDPEVFPDPDRIDFERSPNPHVS---------------FGFGPHYCPGGMLARLES 363
Query: 490 SFWVGTLLHEFKWVQSDYDPVDL 512
V +L ++ P D+
Sbjct: 364 ELLVDAVLDRVPGLKLAVAPEDV 386
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 16/143 (11%)
Query: 371 SRPLTESDLQSMVYL-PAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNI 429
SRP L+S + P + E++R P + +R+A+ D + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 430 WAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATV 489
A RDPE++ DP + ER NP + FG G CPG L
Sbjct: 319 LAANRDPEVFPDPDRIDFERSPNPHVS---------------FGFGPHYCPGGMLARLES 363
Query: 490 SFWVGTLLHEFKWVQSDYDPVDL 512
V +L ++ P D+
Sbjct: 364 ELLVDAVLDRVPGLKLAVAPEDV 386
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 16/143 (11%)
Query: 371 SRPLTESDLQSMVYL-PAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNI 429
SRP L+S + P + E++R P + +R+A+ D + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 430 WAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATV 489
A RDPE++ DP + ER NP + FG G CPG L
Sbjct: 319 LAANRDPEVFPDPDRIDFERSPNPHVS---------------FGFGPHYCPGGMLARLES 363
Query: 490 SFWVGTLLHEFKWVQSDYDPVDL 512
V +L ++ P D+
Sbjct: 364 ELLVDAVLDRVPGLKLAVAPEDV 386
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 16/143 (11%)
Query: 371 SRPLTESDLQSMVYL-PAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNI 429
SRP L+S + P + E++R P + +R+A+ D + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 430 WAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATV 489
A RDPE++ DP + ER NP + FG G CPG L
Sbjct: 319 LAANRDPEVFPDPDRIDFERSPNPHVS---------------FGFGPHYCPGGMLARLES 363
Query: 490 SFWVGTLLHEFKWVQSDYDPVDL 512
V +L ++ P D+
Sbjct: 364 ELLVDAVLDRVPGLKLAVAPEDV 386
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 16/143 (11%)
Query: 371 SRPLTESDLQSMVYL-PAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNI 429
SRP L+S + P + E++R P + +R+A+ D + + AG V+
Sbjct: 259 SRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 430 WAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATV 489
A RDPE++ DP + ER NP + FG G CPG L
Sbjct: 319 LAANRDPEVFPDPDRIDFERSPNPHVS---------------FGFGPHYCPGGMLARLES 363
Query: 490 SFWVGTLLHEFKWVQSDYDPVDL 512
V +L ++ P D+
Sbjct: 364 ELLVDAVLDRVPGLKLAVAPEDV 386
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 32/168 (19%)
Query: 317 DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTE 376
D L+D +IV+ L M+ G +T LI + + HP+ ++ V
Sbjct: 225 DHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALV---------------- 268
Query: 377 SDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDP 436
L AVV+E +R P + R A D V +PAG +V+ A+ RD
Sbjct: 269 --LSGEAEWSAVVEETLRFSTPTSHV-LIRFAAEDVPVGDRVIPAGDALIVSYGALGRD- 324
Query: 437 EIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGL 484
ER P A D++ + ++ FG G CPG L
Sbjct: 325 -----------ERAHGPTADRFDLTRTSGNRHIS-FGHGPHVCPGAAL 360
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 129/340 (37%), Gaps = 62/340 (18%)
Query: 157 GVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNN 216
G R LR +A TH F P++I + +P Q++ + G ++ P
Sbjct: 95 GADHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKLPQ--GDFDFVQHFAHPLP-AL 150
Query: 217 MMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSS 276
+MC LLG+ E YD +G+L+ +L LA + Q + ++
Sbjct: 151 VMCQ-------LLGFPL------------EDYDTVGRLSIETNL-GLALSNDQDILVKVE 190
Query: 277 KLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGT 336
+ + ++ ++ I E R + SD V L D+++ ++ ++ G
Sbjct: 191 QGLGRMFDYLVAAI-EKRKVEPGDDLTSDIVRAFHD----GVLDDYELRTLVATVLVAGY 245
Query: 337 DTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLH 396
+T + + HPD K+ ++ P V+EV+R
Sbjct: 246 ETTNHQLALAMYDFAQHPDQWMKIK------------------ENPELAPQAVEEVLRWS 287
Query: 397 PPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAA 456
P P+ + R+A D V+ +P GT + RDP ++AD +F
Sbjct: 288 PTLPVTA-TRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF----------- 335
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTL 496
DI++ +A FG G C G L ++ V L
Sbjct: 336 --DITVKREAPSIA-FGGGPHFCLGTALARLELTEAVAAL 372
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 129/340 (37%), Gaps = 62/340 (18%)
Query: 157 GVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNN 216
G R LR +A TH F P++I + +P Q++ + G ++ P
Sbjct: 105 GADHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKLPQ--GDFDFVQHFPHPLP-AL 160
Query: 217 MMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSS 276
+MC LLG+ E YD +G+L+ +L LA + Q + ++
Sbjct: 161 VMCQ-------LLGFPL------------EDYDTVGRLSIETNL-GLALSNDQDILVKVE 200
Query: 277 KLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGT 336
+ + ++ ++ I E R + SD V L D+++ ++ ++ G
Sbjct: 201 QGLGRMFDYLVAAI-EKRKVEPGDDLTSDIVRAFHD----GVLDDYELRTLVATVLVAGY 255
Query: 337 DTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLH 396
+T + + HPD K+ ++ P V+EV+R
Sbjct: 256 ETTNHQLALAMYDFAQHPDQWMKIK------------------ENPELAPQAVEEVLRWS 297
Query: 397 PPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAA 456
P P+ + R+A D V+ +P GT + RDP ++AD +F
Sbjct: 298 PTLPVTA-TRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF----------- 345
Query: 457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTL 496
DI++ +A FG G C G L ++ V L
Sbjct: 346 --DITVKREAPSIA-FGGGPHFCLGTALARLELTEAVAAL 382
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 385 LPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLK 444
+P +V E VR P+ S+ R A+ DT V ++ G M++ + RD E++++P +
Sbjct: 300 IPRLVDEAVRW--TAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDE 357
Query: 445 FMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQ 504
F RF N R FG G C G+ L + + LL + K V+
Sbjct: 358 FDITRFPN---------------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVE 402
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 345 WILARMVLHPDIQSKVHSELD-------QVVGRSRPLTESDLQSMVYLPAVVKEVVRLHP 397
W+L ++ +P+ + V EL+ Q V ++ L + L S L +V+ E +RL
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 342
Query: 398 PGPLLSW---ARLAITDTTVDHYHVPAGTTAMV-NIWAIMRDPEIYADPLKFMPERFVNP 453
P ++ LA+ +++ G ++ + RDPEIY DP F RF+NP
Sbjct: 343 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 402
Query: 454 EAAD-MDISLMGSDLR--LAPFGSGRRTCPGKGLGLATVSFWVGTLL 497
+ ++ D G L+ P+G+G C G+ + ++ +V +L
Sbjct: 403 DGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVL 449
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 345 WILARMVLHPDIQSKVHSELD-------QVVGRSRPLTESDLQSMVYLPAVVKEVVRLHP 397
W+L ++ +P+ + V EL+ Q V ++ L + L S L +V+ E +RL
Sbjct: 272 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 330
Query: 398 PGPLLSW---ARLAITDTTVDHYHVPAGTTAMV-NIWAIMRDPEIYADPLKFMPERFVNP 453
P ++ LA+ +++ G ++ + RDPEIY DP F RF+NP
Sbjct: 331 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 390
Query: 454 EAAD-MDISLMGSDLR--LAPFGSGRRTCPGKGLGLATVSFWVGTLL 497
+ ++ D G L+ P+G+G C G+ + ++ +V +L
Sbjct: 391 DGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVL 437
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 379 LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEI 438
+Q Y V+EV R +P GP + AR A D + P G +++++ D
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVV-AR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 325
Query: 439 YADPLKFMPERFVNPEAADMD----ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVG 494
+ADP +F PERF A D D I G D L G R CPG+ + LA +
Sbjct: 326 WADPQEFRPERF---RAWDEDSFNFIPQGGGDHYL-----GHR-CPGEWIVLAIMKVAAH 376
Query: 495 TLLHEFKWVQSDYD 508
L++ ++ D D
Sbjct: 377 LLVNAMRYDVPDQD 390
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 345 WILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSW 404
W++ ++ HP+ V E+ G+ L E + V+ +V+ E +RL +
Sbjct: 275 WVMGYLLTHPEALRAVREEIQG--GKHLRLEERQKNTPVF-DSVLWETLRL-------TA 324
Query: 405 ARLAITDTTVD---------HYHVPAGTTAMVNIW-AIMRDPEIYADPLKFMPERFVNPE 454
A L D T D YH+ G V + + DP+I+ P F +RF+N +
Sbjct: 325 AALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNAD 384
Query: 455 AAD-MDISLMGSDLRL--APFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
+ D G+ ++ P+G+ CPG+ + + V T+L F
Sbjct: 385 RTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRF 433
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDT 338
+++ +++R+I R Q D + L+ S D RL+ +++ + ++ G +T
Sbjct: 213 EMSGYLSRLIDSKRG-----QDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHET 267
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
LI + ++ HPD + + ++ M L V+E++R
Sbjct: 268 TVNLIANGMYALLSHPDQLAALRAD------------------MTLLDGAVEEMLRYE-- 307
Query: 399 GPLLSWA-RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKF 445
GP+ S R + +D +PAG T +V + R PE + DP +F
Sbjct: 308 GPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDT 338
+++ +++R+I R Q D + L+ S D RL+ +++ + ++ G +T
Sbjct: 213 EMSGYLSRLIDSKRG-----QDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHET 267
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
LI + ++ HPD + + ++ M L V+E++R
Sbjct: 268 TVNLIANGMYALLSHPDQLAALRAD------------------MTLLDGAVEEMLRYE-- 307
Query: 399 GPLLSWA-RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKF 445
GP+ S R + +D +PAG T +V + R PE + DP +F
Sbjct: 308 GPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDT 338
+++ +++R+I R Q D + L+ S D RL+ +++ + ++ G +T
Sbjct: 213 EMSGYLSRLIDSKRG-----QDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHET 267
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
LI + ++ HPD + + ++ M L V+E++R
Sbjct: 268 TVNLIANGMYALLSHPDQLAALRAD------------------MTLLDGAVEEMLRYE-- 307
Query: 399 GPLLSWA-RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKF 445
GP+ S R + +D +PAG T +V + R PE + DP +F
Sbjct: 308 GPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 17/97 (17%)
Query: 385 LPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLK 444
LP +V+E +R P+ + R A TDT + + AG M+N A DP + +P K
Sbjct: 322 LPGIVEEAIRWT--TPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRK 379
Query: 445 FMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPG 481
F P R N R FG+G C G
Sbjct: 380 FDPTRPAN---------------RHLAFGAGSHQCLG 401
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 74/208 (35%), Gaps = 43/208 (20%)
Query: 303 NSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHS 362
D + +LL D+L++ + + + G +T LI + ++ HP+ K+
Sbjct: 203 QQDMISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRE 262
Query: 363 ELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAG 422
D ++G V+E +R P + AR+A D + + G
Sbjct: 263 NPD-LIG-----------------TAVEECLRYESPTQMT--ARVASEDIDICGVTIRQG 302
Query: 423 TTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGK 482
+ + A RDP I+ +P F R NP + FG G C G
Sbjct: 303 EQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLS---------------FGHGHHVCLGS 347
Query: 483 GLGLATVSFWVGTLLH--------EFKW 502
L + TLL +F+W
Sbjct: 348 SLARLEAQIAINTLLQRMPSLNLADFEW 375
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 17/122 (13%)
Query: 388 VVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMP 447
VV+EV+R P + R+ D T++ +P+GT + + A RDP + DP F+P
Sbjct: 290 VVEEVLRWTSPA--MHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLP 347
Query: 448 ERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDY 507
R N R FG G C G L +S + L V +
Sbjct: 348 GRKPN---------------RHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLER 392
Query: 508 DP 509
+P
Sbjct: 393 EP 394
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 385 LPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIM--RDPEIYADP 442
+PA+V+EV+R PP P + R T V +PA MVN W + RD + + DP
Sbjct: 274 IPAIVEEVLRYRPPFPQMQ--RTTTKATEVAGVPIPADV--MVNTWVLSANRDSDAHDDP 329
Query: 443 LKFMPER 449
+F P R
Sbjct: 330 DRFDPSR 336
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 385 LPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIM--RDPEIYADP 442
+PA+V+EV+R PP P + R T V +PA MVN W + RD + + DP
Sbjct: 294 IPAIVEEVLRYRPPFPQMQ--RTTTKATEVAGVPIPADV--MVNTWVLSANRDSDAHDDP 349
Query: 443 LKFMPER 449
+F P R
Sbjct: 350 DRFDPSR 356
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 405 ARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMG 464
AR+A+ D V + AG V+ A RDP+++ DP + +R NP A
Sbjct: 297 ARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDPNPHLA-------- 348
Query: 465 SDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
+G+G C G L V TLL
Sbjct: 349 -------YGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 405 ARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMG 464
AR+A+ D V + AG V+ A RDP+++ DP + +R NP A
Sbjct: 297 ARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDPNPHLA-------- 348
Query: 465 SDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
+G+G C G L V TLL
Sbjct: 349 -------YGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 379 LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEI 438
+Q Y V+EV R +P P + AR A D + P G +++++ D
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 317
Query: 439 YADPLKFMPERFVNPEAADMD----ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVG 494
+ADP +F PERF A D D I G D L G R CPG+ + LA +
Sbjct: 318 WADPQEFRPERF---RAWDEDSFNFIPQGGGDHYL-----GHR-CPGEWIVLAIMKVAAH 368
Query: 495 TLLHEFKWVQSDYD 508
L++ ++ D D
Sbjct: 369 LLVNAMRYDVPDQD 382
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 379 LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEI 438
+Q Y V+EV R +P P + AR A D + P G +++++ D
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 317
Query: 439 YADPLKFMPERFVNPEAADMD----ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVG 494
+ADP +F PERF A D D I G D L G R CPG+ + LA +
Sbjct: 318 WADPQEFRPERF---RAWDEDSFNFIPQGGGDHYL-----GHR-CPGEWIVLAIMKVAAH 368
Query: 495 TLLHEFKWVQSDYD 508
L++ ++ D D
Sbjct: 369 LLVNAMRYDVPDQD 382
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 379 LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEI 438
+Q Y V+EV R +P P + AR A D + P G +++++ D
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 317
Query: 439 YADPLKFMPERFVNPEAADMD----ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVG 494
+ADP +F PERF A D D I G D L G R CPG+ + LA +
Sbjct: 318 WADPQEFRPERF---RAWDEDSFNFIPQGGGDHYL-----GHR-CPGEWIVLAIMKVAAH 368
Query: 495 TLLHEFKWVQSDYD 508
L++ ++ D D
Sbjct: 369 LLVNAMRYDVPDQD 382
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 45/226 (19%)
Query: 283 NRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR-LSDHDIVAVLWEMIFRGTDTVAI 341
NR V+R+++ ++ + ++VL S +R L+ + + + +I G +T
Sbjct: 142 NRMVSRLLEIFKSDSHGI------INVLAGSSLKNRKLTMDEKIKYIMLLIIGGNETTTN 195
Query: 342 LIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPL 401
LI ++ + +PDI D + RS V+E +R + P
Sbjct: 196 LIGNMIRVIDENPDIID------DALKNRS---------------GFVEETLRYYSPIQF 234
Query: 402 LSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDIS 461
L R A D+ +++ + G +V + + RD + +P F R
Sbjct: 235 LPH-RFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR------------ 281
Query: 462 LMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDY 507
++ LA FG G C G L S + +L+ FK ++ DY
Sbjct: 282 ---REMHLA-FGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDY 323
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 379 LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEI 438
+Q Y V+EV R +P P + AR A D + P G +++++ D
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 325
Query: 439 YADPLKFMPERFVNPEAADMD----ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVG 494
+ADP +F PERF A D D I G D L G R CPG+ + LA +
Sbjct: 326 WADPQEFRPERF---RAWDEDSFNFIPQGGGDHYL-----GHR-CPGEWIVLAIMKVAAH 376
Query: 495 TLLHEFKWVQSDYD 508
L++ ++ D D
Sbjct: 377 LLVNAMRYDVPDQD 390
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 379 LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEI 438
+Q Y V+EV R +P P + AR A D + P G +++++ D
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 325
Query: 439 YADPLKFMPERFVNPEAADMD----ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVG 494
+ADP +F PERF A D D I G D L G R CPG+ + LA +
Sbjct: 326 WADPQEFRPERF---RAWDEDSFNFIPQGGGDHYL-----GHR-CPGEWIVLAIMKVAAH 376
Query: 495 TLLHEFKWVQSDYD 508
L++ ++ D D
Sbjct: 377 LLVNAMRYDVPDQD 390
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 23/123 (18%)
Query: 385 LPAVVKEVVRLHPPGPLLSWA----RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYA 440
+PA V+E++R++ LS+A RLA D V V G +V +
Sbjct: 265 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGA-------- 311
Query: 441 DPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
F PE F NP + ++D S L FG G+ CPG LG + LL +
Sbjct: 312 ---NFDPEHFPNPGSIELDRPNPTSHLA---FGRGQHFCPGSALGRRHAQIGIEALLKKM 365
Query: 501 KWV 503
V
Sbjct: 366 PGV 368
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 23/123 (18%)
Query: 385 LPAVVKEVVRLHPPGPLLSWA----RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYA 440
+PA V+E++R++ LS+A RLA D V V G +V +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGA-------- 312
Query: 441 DPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
F PE F NP + ++D S L FG G+ CPG LG + LL +
Sbjct: 313 ---NFDPEHFPNPGSIELDRPNPTSHLA---FGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Query: 501 KWV 503
V
Sbjct: 367 PGV 369
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 23/123 (18%)
Query: 385 LPAVVKEVVRLHPPGPLLSWA----RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYA 440
+PA V+E++R++ LS+A RLA D V V G +V +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGA-------- 312
Query: 441 DPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
F PE F NP + ++D S L FG G+ CPG LG + LL +
Sbjct: 313 ---NFDPEHFPNPGSIELDRPNPTSHLA---FGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Query: 501 KWV 503
V
Sbjct: 367 PGV 369
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 23/123 (18%)
Query: 385 LPAVVKEVVRLHPPGPLLSWA----RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYA 440
+PA V+E++R++ LS+A RLA D V V G +V +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGA-------- 312
Query: 441 DPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
F PE F NP + ++D S L FG G+ CPG LG + LL +
Sbjct: 313 ---NFDPEHFPNPGSIELDRPNPTSHLA---FGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Query: 501 KWV 503
V
Sbjct: 367 PGV 369
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 23/123 (18%)
Query: 385 LPAVVKEVVRLHPPGPLLSWA----RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYA 440
+PA V+E++R++ LS+A RLA D V V G +V +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGA-------- 312
Query: 441 DPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
F PE F NP + ++D S L FG G+ CPG LG + LL +
Sbjct: 313 ---NFDPEHFPNPGSIELDRPNPTSHLA---FGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Query: 501 KWV 503
V
Sbjct: 367 PGV 369
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 71/193 (36%), Gaps = 34/193 (17%)
Query: 318 RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTES 377
RLS ++VA++ +I GTDT LI + + ++ P+ V +E L +
Sbjct: 238 RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG--------LMRN 289
Query: 378 DLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPE 437
L ++ +++ + R A D + G + I + +RD
Sbjct: 290 ALDEVLRFENILR-----------IGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGT 338
Query: 438 IYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLL 497
+++ P F R D SL +G G CPG L VGT+
Sbjct: 339 VFSRPDVFDVRR-------DTSASLA--------YGRGPHVCPGVSLARLEAEIAVGTIF 383
Query: 498 HEFKWVQSDYDPV 510
F ++ PV
Sbjct: 384 RRFPEMKLKETPV 396
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 17/97 (17%)
Query: 389 VKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPE 448
V+E +R PP ++ R+ + + G V I + RD E++ DP F+P+
Sbjct: 244 VEEALRFSPP--VMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPD 301
Query: 449 RFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLG 485
R NP + FGSG C G L
Sbjct: 302 RTPNPHLS---------------FGSGIHLCLGAPLA 323
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 71/193 (36%), Gaps = 34/193 (17%)
Query: 318 RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTES 377
RLS ++VA++ +I GTDT LI + + ++ P+ V +E L +
Sbjct: 238 RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG--------LMRN 289
Query: 378 DLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPE 437
L ++ +++ + R A D + G + I + +RD
Sbjct: 290 ALDEVLRFDNILR-----------IGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGT 338
Query: 438 IYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLL 497
+++ P F R D SL +G G CPG L VGT+
Sbjct: 339 VFSRPDVFDVRR-------DTSASLA--------YGRGPHVCPGVSLARLEAEIAVGTIF 383
Query: 498 HEFKWVQSDYDPV 510
F ++ PV
Sbjct: 384 RRFPEMKLKETPV 396
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 29/168 (17%)
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDT 338
+V F+ +++ RT + D + L+S+ D RLS ++ ++ ++ G +
Sbjct: 190 EVVNFILDLVERRRT-----EPGDDLLSALISVQDDDDGRLSADELTSIALVLLLAGFEA 244
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVR-LHP 397
LI ++ HPD + V R+ P LP V+E++R + P
Sbjct: 245 SVSLIGIGTYLLLTHPDQLALV---------RADPSA---------LPNAVEEILRYIAP 286
Query: 398 PGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKF 445
P + R A + + +P +T +V A RDP + DP +F
Sbjct: 287 PE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRF 331
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 23/123 (18%)
Query: 385 LPAVVKEVVRLHPPGPLLSWA----RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYA 440
+PA V+E++R++ L++A RLA D V V G +V +
Sbjct: 266 IPAGVEELLRIN-----LAFADGLPRLATADIQVGDVLVRKGELVLVLLEGA-------- 312
Query: 441 DPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
F PE F NP + ++D S L FG G+ CPG LG + LL +
Sbjct: 313 ---NFDPEHFPNPGSIELDRPNPTSHLA---FGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Query: 501 KWV 503
V
Sbjct: 367 PGV 369
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 68/186 (36%), Gaps = 35/186 (18%)
Query: 331 MIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVK 390
++ G +TVA + W + PD Q +V + + A +
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AAFQ 259
Query: 391 EVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERF 450
E +RL+PP +L+ R + +P GTT +++ + R + D F PERF
Sbjct: 260 EALRLYPPAWILT--RRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERF 315
Query: 451 VNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPV 510
+ R PFG G+R C G+ L + F+ DP+
Sbjct: 316 LEERGTPSG--------RYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFR-----LDPL 362
Query: 511 DLSEVL 516
VL
Sbjct: 363 PFPRVL 368
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 29/168 (17%)
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDT 338
+V F+ +++ RT + D + L+ + D RLS ++ ++ ++ G +T
Sbjct: 191 EVVNFILDLVERRRT-----EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFET 245
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVR-LHP 397
LI ++ HPD + V R P LP V+E++R + P
Sbjct: 246 SVSLIGIGTYLLLTHPDQLALV---------RRDPSA---------LPNAVEEILRYIAP 287
Query: 398 PGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKF 445
P + R A + + +P +T +V A RDP+ + DP +F
Sbjct: 288 PE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 332
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 283 NRFVNRIIQEHRTTQTSLQRNSDFVDVLLSL---SGPDRLSDHDIVAVLWEMIFRGTDTV 339
NR+++ ++ R +D D LL + D ++D ++ + +I G +TV
Sbjct: 200 NRYLDNLLARQR---------ADPDDGLLGMIVRDHGDNVTDEELKGLCTALILGGVETV 250
Query: 340 AILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPG 399
A +I + + ++ +P G+ L ES ++ + +V+ + + P
Sbjct: 251 AGMIGFGVLALLDNP--------------GQIELLFESPEKAERVVNELVRYLSPVQAPN 296
Query: 400 PLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMD 459
P RLAI D +D + AG + +I RD + DP R AA D
Sbjct: 297 P-----RLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANR-----AAVSD 346
Query: 460 ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
+ FG G C G L + + TL F
Sbjct: 347 VG----------FGHGIHYCVGAALARSMLRMAYQTLWRRF 377
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 35/186 (18%)
Query: 331 MIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVK 390
++ G +TVA + W + PD Q +V + + A +
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AAFQ 259
Query: 391 EVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERF 450
E +RL+PP +L+ R + +P GTT +++ + R + + F PERF
Sbjct: 260 EALRLYPPAWILT--RRLERPLLLGEDRLPQGTTLVLSPYVTQRL--YFPEGEAFQPERF 315
Query: 451 VNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPV 510
+ R PFG G+R C G+ L + F+ DP+
Sbjct: 316 LAERGTPSG--------RYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFR-----LDPL 362
Query: 511 DLSEVL 516
VL
Sbjct: 363 PFPRVL 368
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 38/170 (22%)
Query: 331 MIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVK 390
++F G DTVA +I + + HP+ DQ + R RP DL +PA
Sbjct: 231 LLFGGLDTVAAMIGMVALHLARHPE---------DQRLLRERP----DL-----IPAAAD 272
Query: 391 EVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERF 450
E++R + P ++ +R A+ D D + G +V + +++ + P F
Sbjct: 273 ELMRRY---PTVAVSRNAVADVDADGVTIRKGD--LVYLPSVLHN---------LDPASF 318
Query: 451 VNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLG-LATVSF---WVGTL 496
PE D L + +R G G C G GL + + F W+G +
Sbjct: 319 EAPEEVRFDRGL--APIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGM 366
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 24/128 (18%)
Query: 380 QSMVYLPAVVKEVVRLHPP---GPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDP 436
+ +YL A+ +E +R PP + R+ + D T++ G V I + RD
Sbjct: 236 EENLYLKAI-EEALRYSPPVMRTVRKTKERVKLGDQTIEE-----GEYVRVWIASANRDE 289
Query: 437 EIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTL 496
E++ D KF+P+R NP + FGSG C G L +
Sbjct: 290 EVFHDGEKFIPDRNPNPHLS---------------FGSGIHLCLGAPLARLEARIAIEEF 334
Query: 497 LHEFKWVQ 504
F+ ++
Sbjct: 335 SKRFRHIE 342
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 24/128 (18%)
Query: 380 QSMVYLPAVVKEVVRLHPP---GPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDP 436
+ +YL A+ +E +R PP + R+ + D T++ G V I + RD
Sbjct: 236 EENLYLKAI-EEALRYSPPVMRTVRKTKERVKLGDQTIEE-----GEYVRVWIASANRDE 289
Query: 437 EIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTL 496
E++ D KF+P+R NP + FGSG C G L +
Sbjct: 290 EVFHDGEKFIPDRNPNPHLS---------------FGSGIHLCLGAPLARLEARIAIEEF 334
Query: 497 LHEFKWVQ 504
F+ ++
Sbjct: 335 SKRFRHIE 342
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 29/168 (17%)
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDT 338
+V F+ +++ RT + D + L+ + D RLS ++ ++ ++ G ++
Sbjct: 190 EVVNFILDLVERRRT-----EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFES 244
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVR-LHP 397
LI ++ HPD + V R P LP V+E++R + P
Sbjct: 245 SVSLIGIGTYLLLTHPDQLALV---------RRDPSA---------LPNAVEEILRYIAP 286
Query: 398 PGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKF 445
P + R A + + +P +T +V A RDP+ + DP +F
Sbjct: 287 PE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 331
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 29/168 (17%)
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDT 338
+V F+ +++ RT + D + L+ + D RLS ++ ++ ++ G ++
Sbjct: 191 EVVNFILDLVERRRT-----EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFES 245
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVR-LHP 397
LI ++ HPD + V R P LP V+E++R + P
Sbjct: 246 SVSLIGIGTYLLLTHPDQLALV---------RRDPSA---------LPNAVEEILRYIAP 287
Query: 398 PGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKF 445
P + R A + + +P +T +V A RDP+ + DP +F
Sbjct: 288 PE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 332
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 23/123 (18%)
Query: 385 LPAVVKEVVRLHPPGPLLSWA----RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYA 440
+PA V+E++R++ LS+A RLA D V V G +V +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGA-------- 312
Query: 441 DPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
F PE F NP + ++D S L G G+ CPG LG + LL +
Sbjct: 313 ---NFDPEHFPNPGSIELDRPNPTSHLA---HGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Query: 501 KWV 503
V
Sbjct: 367 PGV 369
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 321 DHDIVAVLWEMIFRGTDTVAIL----IEWI-LARMVLHPDIQSKVHSELDQVVGRSRPLT 375
D + +L+ + F V IL ++WI LA LH + ++ + + +T
Sbjct: 263 DEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGN--VT 320
Query: 376 ESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDH---YHVPAGTTAMVNIWAI 432
++ M +VV E +R+ PP P + + T H + V G
Sbjct: 321 LEAIEQMPLTKSVVYESLRIEPPVPP-QYGKAKSNFTIESHDATFEVKKGEMLFGYQPFA 379
Query: 433 MRDPEIYADPLKFMPERFV 451
+DP+++ P +++P+RFV
Sbjct: 380 TKDPKVFDRPEEYVPDRFV 398
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 356 IQSKVHSELDQVV-GRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTV 414
+ +++ E+ V+ LT ++ M +VV E +R PP + + A D +
Sbjct: 317 VHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPP--VTAQYGRAKKDLVI 374
Query: 415 DH----YHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADM 458
+ + V AG RDP+I+ +F+PERFV E +
Sbjct: 375 ESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKL 422
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 356 IQSKVHSELDQVV-GRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTV 414
+ +++ E+ V+ LT ++ M +VV E +R PP + + A D +
Sbjct: 317 VHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPP--VTAQYGRAKKDLVI 374
Query: 415 DH----YHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADM 458
+ + V AG RDP+I+ +F+PERFV E +
Sbjct: 375 ESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKL 422
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 29/168 (17%)
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDT 338
+V F+ +++ RT + D + L+ + D RLS ++ ++ ++ G +
Sbjct: 190 EVVNFILDLVERRRT-----EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEA 244
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVR-LHP 397
LI ++ HPD + V R P LP V+E++R + P
Sbjct: 245 SVSLIGIGTYLLLTHPDQLALV---------RRDPSA---------LPNAVEEILRYIAP 286
Query: 398 PGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKF 445
P + R A + + +P +T +V A RDP+ + DP +F
Sbjct: 287 PE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 331
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 29/168 (17%)
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDT 338
+V F+ +++ RT + D + L+ + D RLS ++ ++ ++ G +
Sbjct: 191 EVVNFILDLVERRRT-----EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEA 245
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVR-LHP 397
LI ++ HPD + V R P LP V+E++R + P
Sbjct: 246 SVSLIGIGTYLLLTHPDQLALV---------RRDPSA---------LPNAVEEILRYIAP 287
Query: 398 PGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKF 445
P + R A + + +P +T +V A RDP+ + DP +F
Sbjct: 288 PE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 332
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 72/185 (38%), Gaps = 38/185 (20%)
Query: 317 DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTE 376
DRLS ++VA+ ++ G +T LI + ++ HPD Q K+ +E ++
Sbjct: 219 DRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKLLAEDPSLIS------- 270
Query: 377 SDLQSMVYLPAVVKEVVRLHPPGPLLSWA--RLAITDTTVDHYHVPAGTTAMVNIWAIMR 434
+ V+E +R P +S A R D T +PAG M+ + A R
Sbjct: 271 ----------SAVEEFLRFDSP---VSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANR 317
Query: 435 DPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVG 494
D + +MPE P+ D+ G FG G C G L +G
Sbjct: 318 DAD-------WMPE----PDRLDITRDASGGVF----FGHGIHFCLGAQLARLEGRVAIG 362
Query: 495 TLLHE 499
L +
Sbjct: 363 RLFAD 367
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 30/166 (18%)
Query: 281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDT 338
+++ +++ +++ RT + + + LL++S D RLS ++VA+ ++ G +T
Sbjct: 186 KLHGYLSDLLERKRT-----EPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHET 240
Query: 339 VAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP 398
LI + ++ HPD Q K+ +E ++ + V+E +R P
Sbjct: 241 TVNLIGNGVLALLTHPD-QRKLLAEDPSLIS-----------------SAVEEFLRFDSP 282
Query: 399 GPLLSWA--RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADP 442
+S A R D T +PAG M+ + A RD + +P
Sbjct: 283 ---VSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEP 325
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 23/123 (18%)
Query: 385 LPAVVKEVVRLHPPGPLLSWA----RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYA 440
+PA V+E++R++ LS+A RLA D V V G +V +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGA-------- 312
Query: 441 DPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF 500
F PE F NP + ++D S L FG G+ C G LG + LL +
Sbjct: 313 ---NFDPEHFPNPGSIELDRPNPTSHLA---FGRGQHFCLGSALGRRHAQIGIEALLKKM 366
Query: 501 KWV 503
V
Sbjct: 367 PGV 369
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 33/170 (19%)
Query: 292 EHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMV 351
E R T+ + S V + G D I+A + M+ G DTV ++ + +
Sbjct: 208 ERRRTEPADDAISHLVAAGVGADG-DTAGTLSILAFTFTMVTAGNDTVTGMLGGSMPLLH 266
Query: 352 LHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITD 411
PD + + LD G +P V+E++RL P+ AR D
Sbjct: 267 RRPDQRRLL---LDDPEG---------------IPDAVEELLRL--TSPVQGLARTTTRD 306
Query: 412 TTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDIS 461
T+ +PAG ++ + RD ER P+AA++D++
Sbjct: 307 VTIGDTTIPAGRRVLLLYGSANRD------------ERQYGPDAAELDVT 344
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 33/170 (19%)
Query: 292 EHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMV 351
E R T+ + S V + G D I+A + M+ G DTV ++ + +
Sbjct: 208 ERRRTEPADDAISHLVAAGVGADG-DTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLH 266
Query: 352 LHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITD 411
PD + + LD G +P V+E++RL P+ AR D
Sbjct: 267 RRPDQRRLL---LDDPEG---------------IPDAVEELLRL--TSPVQGLARTTTRD 306
Query: 412 TTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDIS 461
T+ +PAG ++ + RD ER P+AA++D++
Sbjct: 307 VTIGDTTIPAGRRVLLLYGSANRD------------ERQYGPDAAELDVT 344
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 33/170 (19%)
Query: 292 EHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMV 351
E R T+ + S V + G D I+A + M+ G DTV ++ + +
Sbjct: 209 ERRRTEPADDAISHLVAAGVGADG-DTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLH 267
Query: 352 LHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITD 411
PD + + LD G +P V+E++RL P+ AR D
Sbjct: 268 RRPDQRRLL---LDDPEG---------------IPDAVEELLRLT--SPVQGLARTTTRD 307
Query: 412 TTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDIS 461
T+ +PAG ++ + RD ER P+AA++D++
Sbjct: 308 VTIGDTTIPAGRRVLLLYGSANRD------------ERQYGPDAAELDVT 345
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 386 PAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADP 442
PA V+E++R PP + + R A D + + +P G+ + + + RDP + DP
Sbjct: 288 PAAVEELMRYDPP--VQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDP 342
>pdb|2GY9|C Chain C, Structure Of The 30s Subunit Of A Pre-Translocational E.
Coli Ribosome Obtained By Fitting Atomic Models For Rna
And Protein Components Into Cryo-Em Map Emd-1056
pdb|2GYB|C Chain C, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli
Ribosome Complex Obtained By Fitting Atomic Models For
Rna And Protein Components Into Cryo-Em Map Emd-1143
pdb|3FIH|C Chain C, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
Consists Of The 30s Subunit, Trnas And The Ternary
Complex.
pdb|2WWL|C Chain C, E.Coli 70s Ribosome Stalled During Translation Of Tnac
Leader Peptide. This File Contains The 30s, The P-Site
Trna And The Tnac Leader Peptide (Part 1 Of 2).
pdb|3OFO|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
pdb|3OFP|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
pdb|3OFA|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The First 70s Ribosome.
pdb|3OFB|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The Second 70s Ribosome.
pdb|3OFX|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
pdb|3OFY|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome
pdb|3OAQ|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
pdb|3OAR|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
pdb|2YKR|C Chain C, 30s Ribosomal Subunit With Rsga Bound In The Presence Of
Gmppnp
pdb|4A2I|C Chain C, Cryo-Electron Microscopy Structure Of The 30s Subunit In
Complex With The Yjeq Biogenesis Factor
pdb|3J18|C Chain C, Structure Of The Bacterial Ribosome Complexed By
Tmrna-Smpb And Ef-G During Translocation And Mld-Loading
(30s Subunit)
pdb|4GD1|C Chain C, Structures Of The Bacterial Ribosome In Classical And
Hybrid States Of Trna Binding
pdb|4GD2|C Chain C, Structures Of The Bacterial Ribosome In Classical And
Hybrid States Of Trna Binding
Length = 206
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Query: 130 SSVFADRPVKESAYSLMFNR-AIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIA 188
S + +RP K ++ R I G LR++ A P QIN AE ++ ++
Sbjct: 52 SRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELD 111
Query: 189 SQMVS-MIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARR 239
+++V+ I S R +K A N M G K + G E R
Sbjct: 112 AKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR 163
>pdb|1VS5|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|1VS7|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|3E1A|O Chain O, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Pre- Accommodation State
pdb|3E1C|O Chain O, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Post-Accommodation State
pdb|3I1M|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
pdb|3I1O|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
pdb|3I1Q|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
pdb|3I1S|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
pdb|3I1Z|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
pdb|3I21|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
pdb|3KC4|C Chain C, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s
Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found
In Pdb Entry 3kcr
pdb|3OR9|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The First
70s Ribosome.
pdb|3ORA|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
pdb|3IZV|G Chain G, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Small Subunit Of A Ribosome Programmed With A
Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And
Ef-Tu
pdb|3IZW|G Chain G, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding.This Entry Contains The
Small Subunit Of A Ribosome Programmed With A Cognate
Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu
pdb|3SFS|C Chain C, Crystal Structure Of Release Factor Rf3 Trapped In The Gtp
State On A Rotated Conformation Of The Ribosome
pdb|3UOQ|C Chain C, Crystal Structure Of Release Factor Rf3 Trapped In The Gtp
State On A Rotated Conformation Of The Ribosome (Without
Viomycin)
pdb|4GAQ|C Chain C, Allosteric Control Of The Ribosome By Small-Molecule
Antibiotics
pdb|4GAS|C Chain C, Allosteric Control Of The Ribosome By Small-Molecule
Antibiotics
Length = 233
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Query: 130 SSVFADRPVKESAYSLMFNR-AIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIA 188
S + +RP K ++ R I G LR++ A P QIN AE ++ ++
Sbjct: 53 SRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELD 112
Query: 189 SQMVS-MIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARR 239
+++V+ I S R +K A N M G K + G E R
Sbjct: 113 AKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR 164
>pdb|1P6G|C Chain C, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
State Of E. Coli 70s Ribosome
pdb|1P87|C Chain C, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The
Initiation-Like State Of E. Coli 70s Ribosome
pdb|2AVY|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|2AW7|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 30s Subunit Of The Second 70s Ribosome. The Entire
Crystal Structure Contains Two 70s Ribosomes And Is
Described In Remark 400.
pdb|2I2P|C Chain C, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|2I2U|C Chain C, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|2QOU|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The First 70s Ribosome,
With Spectinomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
pdb|2QOW|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The Second 70s
Ribosome, With Spectinomycin Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
pdb|2QOY|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
First 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
pdb|2QP0|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
pdb|2QAL|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Neomycin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
pdb|2QAN|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Neomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
pdb|2QB9|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Gentamicin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
pdb|2QBB|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Gentamicin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
pdb|2QBD|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
First 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
pdb|2QBF|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
pdb|2QBH|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 30s
Subunit Of The First 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
pdb|2QBJ|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 30s
Subunit Of The Second 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
pdb|2Z4K|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The First 70s Ribosome, With Paromomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
pdb|2Z4M|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The Second 70s Ribosome, With Paromomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
pdb|2VHO|C Chain C, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 3 Of 4)
pdb|2VHP|C Chain C, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 4 Of 4)
pdb|3DF1|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Hygromycin B Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
pdb|3DF3|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Hygromycin B Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
pdb|3J00|C Chain C, Structure Of The Ribosome-Secye Complex In The Membrane
Environment
pdb|4ADV|C Chain C, Structure Of The E. Coli Methyltransferase Ksga Bound To
The E. Coli 30s Ribosomal Subunit
pdb|3J0U|F Chain F, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class2 Of The Six
Classes)
pdb|3J0V|F Chain F, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 4a Of The Six
Classes)
pdb|3J0X|F Chain F, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 4b Of The Six
Classes)
pdb|3J0Z|F Chain F, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 5 Of The Six
Classes)
pdb|3J10|F Chain F, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 6 Of The Six
Classes)
pdb|3J13|E Chain E, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 3 Of The Six
Classes)
Length = 232
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Query: 130 SSVFADRPVKESAYSLMFNR-AIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIA 188
S + +RP K ++ R I G LR++ A P QIN AE ++ ++
Sbjct: 52 SRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELD 111
Query: 189 SQMVS-MIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARR 239
+++V+ I S R +K A N M G K + G E R
Sbjct: 112 AKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR 163
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 70/182 (38%), Gaps = 35/182 (19%)
Query: 303 NSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHS 362
D + ++L +S ++IV+ + IF G +TVA + + ++ HPD
Sbjct: 202 GEDLLALMLDAHDRGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPD------- 254
Query: 363 ELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAG 422
+LD + R RP DL L V+E +R P + S R D + +
Sbjct: 255 QLDLL--RRRP----DL-----LAQAVEECLRYDP--SVQSNTRQLDVDVELRGRRLRRD 301
Query: 423 TTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGK 482
+V A RDP Y P F ER P + FG+G R C G
Sbjct: 302 DVVVVLAGAANRDPRRYDRPDDFDIERDPVPSMS---------------FGAGMRYCLGS 346
Query: 483 GL 484
L
Sbjct: 347 YL 348
>pdb|4FB2|A Chain A, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|B Chain B, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|C Chain C, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|D Chain D, Crystal Structure Of Substrate-Free P450cin
pdb|4FYZ|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FYZ|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FMX|A Chain A, Crystal Structure Of Substrate-Bound P450cin
pdb|4FMX|B Chain B, Crystal Structure Of Substrate-Bound P450cin
Length = 398
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 63/166 (37%), Gaps = 29/166 (17%)
Query: 289 IIQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILA 348
+I E RT N V++S + LS+ D++ ++ G D A + +
Sbjct: 191 LIAERRTNPG----NDIMSRVIMSKIDGESLSEDDLIGFFTILLLGGIDNTARFLSSVFW 246
Query: 349 RMVLHPDIQSKV--HSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWAR 406
R+ +++ ++ H EL +P V E++R + P + R
Sbjct: 247 RLAWDIELRRRLIAHPEL--------------------IPNAVDELLRFYGPAMV---GR 283
Query: 407 LAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVN 452
L + TV + G TAM+ RD + P + ER N
Sbjct: 284 LVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTPN 329
>pdb|1T2B|A Chain A, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
pdb|1T2B|B Chain B, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
Length = 397
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 63/166 (37%), Gaps = 29/166 (17%)
Query: 289 IIQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILA 348
+I E RT N V++S + LS+ D++ ++ G D A + +
Sbjct: 190 LIAERRTNPG----NDIMSRVIMSKIDGESLSEDDLIGFFTILLLGGIDNTARFLSSVFW 245
Query: 349 RMVLHPDIQSKV--HSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWAR 406
R+ +++ ++ H EL +P V E++R + P + R
Sbjct: 246 RLAWDIELRRRLIAHPEL--------------------IPNAVDELLRFYGPAMV---GR 282
Query: 407 LAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVN 452
L + TV + G TAM+ RD + P + ER N
Sbjct: 283 LVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTPN 328
>pdb|3BDZ|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BDZ|B Chain B, The Role Of Asn 242 In P450cin
pdb|3BE0|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BE0|B Chain B, The Role Of Asn 242 In P450cin
Length = 397
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 63/166 (37%), Gaps = 29/166 (17%)
Query: 289 IIQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILA 348
+I E RT N V++S + LS+ D++ ++ G D A + +
Sbjct: 190 LIAERRTNPG----NDIMSRVIMSKIDGESLSEDDLIGFFTILLLGGIDATARFLSSVFW 245
Query: 349 RMVLHPDIQSKV--HSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWAR 406
R+ +++ ++ H EL +P V E++R + P + R
Sbjct: 246 RLAWDIELRRRLIAHPEL--------------------IPNAVDELLRFYGPAMV---GR 282
Query: 407 LAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVN 452
L + TV + G TAM+ RD + P + ER N
Sbjct: 283 LVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTPN 328
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 35/178 (19%)
Query: 321 DH-DIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDL 379
DH +V++ + ++ G +T A +I + ++ HP+ + V + GR+
Sbjct: 231 DHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKAN----PGRT-------- 278
Query: 380 QSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIY 439
P V+E++R ++ +RLA D + + AG +V++ + DP ++
Sbjct: 279 ------PMAVEELLRYFTIADGVT-SRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVF 331
Query: 440 ADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLL 497
DP ER G+ LA FG G C G+ L + TL
Sbjct: 332 KDPAVLDVER--------------GARHHLA-FGFGPHQCLGQNLARMELQIVFDTLF 374
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,504,340
Number of Sequences: 62578
Number of extensions: 616376
Number of successful extensions: 1967
Number of sequences better than 100.0: 178
Number of HSP's better than 100.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 1613
Number of HSP's gapped (non-prelim): 204
length of query: 535
length of database: 14,973,337
effective HSP length: 103
effective length of query: 432
effective length of database: 8,527,803
effective search space: 3684010896
effective search space used: 3684010896
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 54 (25.4 bits)