Query         009414
Match_columns 535
No_of_seqs    229 out of 2601
Neff          10.9
Searched_HMMs 46136
Date          Thu Mar 28 12:49:48 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009414.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009414hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0   5E-85 1.1E-89  635.7  47.6  453   67-534    25-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 6.7E-81 1.4E-85  596.5  39.0  452   55-534    25-499 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0   9E-78   2E-82  609.2  48.6  461   65-534    54-534 (543)
  4 PLN00110 flavonoid 3',5'-hydro 100.0 2.7E-77 5.9E-82  600.2  47.1  460   67-534    30-497 (504)
  5 PLN03234 cytochrome P450 83B1; 100.0 2.1E-77 4.6E-82  604.5  46.4  459   65-533    25-498 (499)
  6 PLN02687 flavonoid 3'-monooxyg 100.0 4.3E-77 9.2E-82  602.6  47.6  463   66-534    32-509 (517)
  7 PLN02183 ferulate 5-hydroxylas 100.0 3.6E-77 7.8E-82  603.0  46.5  451   67-533    35-511 (516)
  8 PLN03112 cytochrome P450 famil 100.0 7.5E-77 1.6E-81  602.1  48.5  469   62-534    26-508 (514)
  9 PTZ00404 cytochrome P450; Prov 100.0 1.7E-77 3.6E-82  602.5  43.2  449   67-533    28-482 (482)
 10 PLN00168 Cytochrome P450; Prov 100.0 8.9E-76 1.9E-80  593.3  49.3  458   67-534    34-517 (519)
 11 PLN02394 trans-cinnamate 4-mon 100.0 3.3E-75 7.1E-80  589.1  48.6  457   67-534    29-502 (503)
 12 PLN02290 cytokinin trans-hydro 100.0 7.1E-76 1.5E-80  595.3  42.8  440   69-534    43-515 (516)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 8.3E-76 1.8E-80  584.1  36.6  448   67-534    34-496 (497)
 14 PLN02966 cytochrome P450 83A1  100.0 1.3E-74 2.9E-79  582.8  44.6  455   67-533    28-499 (502)
 15 PLN02655 ent-kaurene oxidase   100.0 5.7E-74 1.2E-78  572.8  44.8  452   70-535     1-465 (466)
 16 KOG0159 Cytochrome P450 CYP11/ 100.0 1.5E-74 3.3E-79  538.9  37.3  454   64-534    46-518 (519)
 17 PLN03018 homomethionine N-hydr 100.0 4.6E-72   1E-76  562.9  49.5  466   66-534    38-524 (534)
 18 PLN02500 cytochrome P450 90B1  100.0 8.7E-73 1.9E-77  568.5  43.6  435   66-532    36-488 (490)
 19 PLN02169 fatty acid (omega-1)- 100.0 3.2E-72 6.9E-77  562.3  39.5  441   69-533    32-499 (500)
 20 PLN02774 brassinosteroid-6-oxi 100.0   6E-72 1.3E-76  557.8  41.2  424   68-532    31-462 (463)
 21 PLN03195 fatty acid omega-hydr 100.0 6.6E-72 1.4E-76  565.8  40.9  450   70-534    32-516 (516)
 22 PLN02196 abscisic acid 8'-hydr 100.0 1.9E-71   4E-76  553.7  43.1  425   66-533    33-462 (463)
 23 PF00067 p450:  Cytochrome P450 100.0 1.2E-72 2.6E-77  569.8  33.6  445   70-530     1-463 (463)
 24 PLN02738 carotene beta-ring hy 100.0 1.1E-70 2.4E-75  558.4  43.6  439   80-535   143-596 (633)
 25 PLN02302 ent-kaurenoic acid ox 100.0 5.9E-70 1.3E-74  550.7  46.6  433   65-534    39-488 (490)
 26 PLN03141 3-epi-6-deoxocathaste 100.0   2E-70 4.3E-75  545.7  40.9  431   65-535     4-451 (452)
 27 PLN02987 Cytochrome P450, fami 100.0 3.3E-69 7.2E-74  535.3  43.9  431   65-534    27-469 (472)
 28 KOG0684 Cytochrome P450 [Secon 100.0 1.1E-69 2.3E-74  493.2  34.0  445   68-534    31-485 (486)
 29 PLN02426 cytochrome P450, fami 100.0 2.6E-68 5.6E-73  533.1  42.8  439   76-535    49-501 (502)
 30 PLN02936 epsilon-ring hydroxyl 100.0 3.8E-68 8.3E-73  533.1  41.6  444   70-535    14-483 (489)
 31 PLN02648 allene oxide synthase 100.0 1.6E-59 3.4E-64  462.0  28.0  411   64-507    13-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.3E-54 2.8E-59  422.6  30.7  379   89-533    24-410 (411)
 33 PF15050 SCIMP:  SCIMP protein   88.5     1.4 2.9E-05   33.5   5.1   55   29-83     16-84  (133)
 34 PF10577 UPF0560:  Uncharacteri  62.6      12 0.00027   39.1   4.8   43    7-49    246-298 (807)
 35 PF12273 RCR:  Chitin synthesis  53.7      15 0.00033   29.4   3.1    7   66-72     30-36  (130)
 36 PF05952 ComX:  Bacillus compet  51.7      16 0.00035   24.1   2.3   18  346-363     5-22  (57)
 37 KOG0114 Predicted RNA-binding   42.7   1E+02  0.0022   23.4   5.5   60   66-129    10-75  (124)
 38 COG0851 MinE Septum formation   41.8      50  0.0011   24.0   3.8   42  329-370     4-52  (88)
 39 PF12955 DUF3844:  Domain of un  39.0      77  0.0017   24.0   4.6   29   18-46     62-90  (103)
 40 PF05568 ASFV_J13L:  African sw  37.6      40 0.00086   26.8   3.0   29   21-49     25-53  (189)
 41 PHA03049 IMV membrane protein;  37.3      71  0.0015   21.7   3.6    7   67-73     30-36  (68)
 42 KOG3506 40S ribosomal protein   30.5      23 0.00051   22.8   0.6   11  470-480    12-22  (56)
 43 PF15330 SIT:  SHP2-interacting  30.4 1.4E+02  0.0031   22.9   4.9   12   75-86     45-56  (107)
 44 PF12508 DUF3714:  Protein of u  29.7      42 0.00091   29.1   2.3   44  381-427    51-94  (200)
 45 PF07886 BA14K:  BA14K-like pro  28.9      53  0.0011   18.6   1.8   16  465-480    16-31  (31)
 46 PHA02902 putative IMV membrane  27.7      69  0.0015   21.5   2.4   14   35-48     10-23  (70)
 47 PF07095 IgaA:  Intracellular g  27.6      70  0.0015   33.1   3.7   67    6-82    207-274 (705)
 48 PF09201 SRX:  SRX;  InterPro:   27.2      56  0.0012   26.0   2.3   24  477-500    18-41  (148)
 49 PF15176 LRR19-TM:  Leucine-ric  26.3      47   0.001   24.7   1.7   10   49-58     38-47  (102)
 50 PF07849 DUF1641:  Protein of u  26.3      82  0.0018   19.3   2.5   20  343-362    12-31  (42)
 51 PF01102 Glycophorin_A:  Glycop  24.4      45 0.00097   26.2   1.4   11   26-36     65-75  (122)
 52 PF15202 Adipogenin:  Adipogeni  24.3 1.5E+02  0.0034   20.0   3.6   12   15-26      7-18  (81)
 53 PF12554 MOZART1:  Mitotic-spin  24.3   2E+02  0.0043   18.3   4.6   42  323-364     6-47  (48)
 54 PF13625 Helicase_C_3:  Helicas  23.1 1.7E+02  0.0037   23.2   4.6   40   87-130    74-113 (129)
 55 PF02083 Urotensin_II:  Urotens  22.8      39 0.00084   14.3   0.4    7    3-9       2-8   (12)
 56 PHA03162 hypothetical protein;  22.6      71  0.0015   25.1   2.1   24  473-496     2-25  (135)
 57 PF09551 Spore_II_R:  Stage II   22.5   1E+02  0.0022   24.6   3.0   19  406-424    80-98  (130)
 58 cd01324 cbb3_Oxidase_CcoQ Cyto  21.7 2.2E+02  0.0047   18.1   3.8   22   28-49     11-32  (48)
 59 PRK13991 cell division topolog  21.1 2.2E+02  0.0049   20.8   4.3   18  353-370    35-52  (87)
 60 PRK06789 flagellar motor switc  20.8 1.1E+02  0.0023   21.6   2.5   40  388-428    21-62  (74)
 61 PF14824 Sirohm_synth_M:  Siroh  20.7 1.3E+02  0.0029   16.9   2.3   15  353-367    15-29  (30)
 62 PF11138 DUF2911:  Protein of u  20.5      79  0.0017   25.8   2.1   22  408-429    52-73  (145)
 63 PF14550 Peptidase_U35_2:  Puta  20.3      68  0.0015   25.3   1.6   22  406-427    71-92  (122)
 64 PF12444 Sox_N:  Sox developmen  20.3      71  0.0015   23.2   1.6   20  487-506    60-79  (84)
 65 PF03597 CcoS:  Cytochrome oxid  20.1 2.1E+02  0.0046   17.9   3.4   21   29-49      6-26  (45)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5e-85  Score=635.70  Aligned_cols=453  Identities=38%  Similarity=0.659  Sum_probs=402.0

Q ss_pred             CCCCCCCCCCCccccccccCCC-hhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCch-hhh
Q 009414           67 SKPIPGPRGLPFIGSMSLMTNL-PHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVK-ESA  142 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~~~-~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~-~~~  142 (535)
                      .+.||||+++|+|||++++... ++..+.+|.++|  ||+|++|+|..++|||+|+++++|+++.  ..|+.|+.. ...
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~y--Gpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKY--GPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHh--CCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            6789999999999999999876 999999999999  9999999999999999999999999984  899999972 233


Q ss_pred             hhhh-cccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh-CCCceeHHHHHHHHHHHHHHHH
Q 009414          143 YSLM-FNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY-GGSAFRLRDILKPASLNNMMCS  220 (535)
Q Consensus       143 ~~~~-~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~-~~~~vdl~~~~~~~~~~vi~~~  220 (535)
                      .... .+.+++++++|+.|+++||+....+|+...++++.....++++.+++.+.+. ++++||+.+.+..++.++|+++
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~  182 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRM  182 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHH
Confidence            3344 3488999999999999999999999999999999888899999999999862 2278999999999999999999


Q ss_pred             HhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccc-cccccc-hhHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 009414          221 VFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLP-WLADFD-LQKVRLRSSKLVPQVNRFVNRIIQEHRTTQT  298 (535)
Q Consensus       221 ~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  298 (535)
                      +||.++..   .++++..++.+.+.+..+..+.+...+++| ++.+++ ..+..++......++..++++.|+++++..+
T Consensus       183 ~fG~rf~~---~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~  259 (489)
T KOG0156|consen  183 LFGRRFEE---EDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIG  259 (489)
T ss_pred             HhCCcccc---CCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            99999987   444577779999999999999999999999 676664 2356667777777799999999999988642


Q ss_pred             CCCCCCcHHHHHhccCCCCC---CCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCC
Q 009414          299 SLQRNSDFVDVLLSLSGPDR---LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLT  375 (535)
Q Consensus       299 ~~~~~~d~l~~ll~~~~~~~---l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~  375 (535)
                      .++. .|++|.+++..++++   +++++|.+.+.++++||+|||++|+.|++.+|++||++|+|+|+||++++|.++.++
T Consensus       260 ~~~~-~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~  338 (489)
T KOG0156|consen  260 DEEG-RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVS  338 (489)
T ss_pred             cCCC-CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC
Confidence            1223 499999999765332   899999999999999999999999999999999999999999999999999888899


Q ss_pred             hhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCC
Q 009414          376 ESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEA  455 (535)
Q Consensus       376 ~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~  455 (535)
                      .+|+.+||||+|||+||+|++|++|... +|.+.+|+.++||.|||||.|+++.|++|+||++|+||++|+||||++.++
T Consensus       339 e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~-ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~d  417 (489)
T KOG0156|consen  339 ESDLPKLPYLKAVIKETLRLHPPLPLLL-PRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSND  417 (489)
T ss_pred             hhhhccCHHHHHHHHHHHhcCCCccccc-cccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCcc
Confidence            9999999999999999999999999876 899999999999999999999999999999999999999999999998741


Q ss_pred             CCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          456 ADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       456 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      .      ......++|||.|+|+|||..+|++|+.+++|+++++|+|++.++ .+++... +++...+.|+.+...+|.
T Consensus       418 ~------~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  418 G------KGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             c------cCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecCCcceeeeecCC
Confidence            1      114578999999999999999999999999999999999999987 6677666 477777788888887774


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.7e-81  Score=596.49  Aligned_cols=452  Identities=24%  Similarity=0.424  Sum_probs=356.3

Q ss_pred             cccccccCCCCCCCCCCCCCCCCccccccccCC--ChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--
Q 009414           55 GKHLYKKGSKACSKPIPGPRGLPFIGSMSLMTN--LPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--  130 (535)
Q Consensus        55 ~~~~~~~~~~~~~~~~PgP~~~P~iG~~~~~~~--~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--  130 (535)
                      ..||+||+       +|||+++|++||+..+..  .+.....+...+|  |+++.++.|.++.++|+||+.+++|+..  
T Consensus        25 ~~yw~rrG-------i~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~--~~~~G~y~~~~p~l~v~D~elik~I~ik~F   95 (499)
T KOG0158|consen   25 YSYWRRRG-------IPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKY--RPVVGIYEGRQPALLVSDPELIKEILIKDF   95 (499)
T ss_pred             hhhhccCC-------CCCCCCCCcEecHHHHHhccCcHHHHHHHHhcC--CCEEEEEecCCcceEecCHHHHHHHHHHhC
Confidence            35776665       999999999999988863  3366666666666  8999999999999999999999999983  


Q ss_pred             CCCCCC--CchhhhhhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCC--CceeHH
Q 009414          131 SVFADR--PVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGG--SAFRLR  206 (535)
Q Consensus       131 ~~~~~~--~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~--~~vdl~  206 (535)
                      .+|..+  +....-...+...++ +..+|+.||++|..+ +|.||..+++.|.+.+++.++++++.+.+...  ..+++.
T Consensus        96 ~~F~~r~~~~~~d~~~~l~~~~L-f~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~  173 (499)
T KOG0158|consen   96 DNFYNRKRPIYGDPEDPLSALNL-FFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIK  173 (499)
T ss_pred             ccCcCCCCCCcCCCCCcccccCc-hhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHH
Confidence            788884  333322222222344 555999999999999 89999999999999999999999999988633  478999


Q ss_pred             HHHHHHHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHh-cccccc----ccccccccccchhHHHHHHHHhhHH
Q 009414          207 DILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDL-LGKLNF----SDHLPWLADFDLQKVRLRSSKLVPQ  281 (535)
Q Consensus       207 ~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~P~l~~l~~~~~~~~~~~~~~~  281 (535)
                      +.+.++|.|||+.++||.+.+++..    ....+.......+.. ...+.+    ...+|.+...  ...........+.
T Consensus       174 dl~~~yT~DVI~~~AfG~~~~s~~d----~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~--l~~~~~~~~~~~~  247 (499)
T KOG0158|consen  174 DLCARYTTDVIGSCAFGLDANSLRD----PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP--LRVKLFPEDVTDF  247 (499)
T ss_pred             HHHHHHHHHHHhHhhcccchhhhcC----chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh--hhcccChHHHHHH
Confidence            9999999999999999999888542    222333222222222 111111    1122322211  1111122333444


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCC-------C-CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhC
Q 009414          282 VNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGP-------D-RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLH  353 (535)
Q Consensus       282 ~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~-------~-~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~  353 (535)
                      +.+.+...++.|.+   .+..+.|+++.++++..+       . .+|.+||+++++.|++||.||||++++.++|+|++|
T Consensus       248 ~~~~v~~~v~~R~~---~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~  324 (499)
T KOG0158|consen  248 FRKLVNSRVEQREK---ENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKN  324 (499)
T ss_pred             HHHHHHHHHHHHHh---cCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcC
Confidence            45555555555522   223344999999998743       1 499999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceec-CeeeCCCCEEEEehhhh
Q 009414          354 PDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAI  432 (535)
Q Consensus       354 p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~-g~~ip~G~~v~~~~~~~  432 (535)
                      |++|+|||+||+++..+...+|+|.+.+|+||++||+||||+||+++..  .|.+.+|++++ ++.||||+.|.++++++
T Consensus       325 PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~--~R~C~k~~~i~~~~~i~kG~~V~Ip~~al  402 (499)
T KOG0158|consen  325 PDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL--NRECTKDYEIPGGFVIPKGTPVMIPTYAL  402 (499)
T ss_pred             hHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc--cceecCceecCCCeEeCCCCEEEeecccc
Confidence            9999999999999987655599999999999999999999999999987  89999999999 99999999999999999


Q ss_pred             hcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCc
Q 009414          433 MRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDL  512 (535)
Q Consensus       433 ~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~  512 (535)
                      ||||++||||++|+||||.+++.+      ...++.|+|||.|||.|+|++||++|+|+.|+.||++|+++..+....+.
T Consensus       403 H~Dp~~~p~Pe~F~PERF~~~~~~------~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~  476 (499)
T KOG0158|consen  403 HHDPEYWPEPEKFKPERFEEENNK------SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPL  476 (499)
T ss_pred             cCCcccCCCcccCCCccCCCCccc------ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcc
Confidence            999999999999999999977622      23678999999999999999999999999999999999999988322221


Q ss_pred             -cccccccccccCceeEEEEecc
Q 009414          513 -SEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       513 -~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                       ....+.+..|++++++++++|.
T Consensus       477 ~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  477 EGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             cCCccceeeecCCceEEEEEeCC
Confidence             1234677899999999999985


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=9e-78  Score=609.23  Aligned_cols=461  Identities=25%  Similarity=0.476  Sum_probs=366.4

Q ss_pred             CCCCCCCCCCCCCccccccccCC-C-hhHHHHHHHHHhcCc-ceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCch
Q 009414           65 ACSKPIPGPRGLPFIGSMSLMTN-L-PHHNLAAAAEAYKAK-RVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVK  139 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~~~-~-~~~~l~~~~~ky~~G-~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~  139 (535)
                      ++.+.||||+++|++||++.+.. . .+.++.++.++|  | ++|++++|+.++|+|+||+.+++++.+  ..|.+++..
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~y--g~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~  131 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKEL--NTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLT  131 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHh--CCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcc
Confidence            34678999999999999988743 2 467899999999  6 899999999999999999999999984  568888753


Q ss_pred             hhhhhhhccc---ceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHH
Q 009414          140 ESAYSLMFNR---AIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASL  214 (535)
Q Consensus       140 ~~~~~~~~g~---~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~  214 (535)
                      ... . ..|.   +.++..+|+.|+++|+.+.++++++...+.+.+.++++++.+++.+.+.  +++++|+.+.++++++
T Consensus       132 ~~~-~-~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~  209 (543)
T PLN02971        132 YAQ-K-ILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCG  209 (543)
T ss_pred             cch-h-hccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHH
Confidence            322 1 2232   3467679999999999997777888788889999999999999888653  4567999999999999


Q ss_pred             HHHHHHHhcccccccCCC-CchHHHHHHHHHHHHHHhcc---ccccccccccccccchhHHHHHHHHhhHHHHHHHHHHH
Q 009414          215 NNMMCSVFGRKYALLGYS-SNTEARRLSRLVEEGYDLLG---KLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRII  290 (535)
Q Consensus       215 ~vi~~~~fG~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i  290 (535)
                      +++++++||.++...... +++...+..+.++..+....   ...+.+++|++.+++..+..+...+..+.+.+++.+.|
T Consensus       210 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  289 (543)
T PLN02971        210 NAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPII  289 (543)
T ss_pred             HHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence            999999999987431100 01111222333333332211   12344567776655322334455556778888999999


Q ss_pred             HHHHHhhcCC--CCCCcHHHHHhccCCCC---CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHH
Q 009414          291 QEHRTTQTSL--QRNSDFVDVLLSLSGPD---RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELD  365 (535)
Q Consensus       291 ~~~~~~~~~~--~~~~d~l~~ll~~~~~~---~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~  365 (535)
                      +++++..+.+  ....|+++.|++..+++   .++++++.+++.++++||+|||+++++|++++|++||++|+|+|+||+
T Consensus       290 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~  369 (543)
T PLN02971        290 DERIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEID  369 (543)
T ss_pred             HHHHHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            8887643221  12249999999865432   389999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCC
Q 009414          366 QVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKF  445 (535)
Q Consensus       366 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  445 (535)
                      +++++++.++++++++||||+|||+|+||++|++|... +|.+.+|++++||.||||+.|.+++|++||||++|+||++|
T Consensus       370 ~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~-~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F  448 (543)
T PLN02971        370 RVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNL-PHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSF  448 (543)
T ss_pred             HHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCc-ceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCcccc
Confidence            99988788999999999999999999999999999743 89999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCC-CCCccccccccccccC
Q 009414          446 MPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYD-PVDLSEVLRLSCEMKN  524 (535)
Q Consensus       446 ~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~  524 (535)
                      +||||++++.+.   .....+..|+|||.|+|+|+|++||++|+++++|+||++|+|++.+++ +.++....+ +...++
T Consensus       449 ~PeRfl~~~~~~---~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~  524 (543)
T PLN02971        449 KPERHLNECSEV---TLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSK  524 (543)
T ss_pred             CcccCCCCCccc---cccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccc
Confidence            999999753110   011134679999999999999999999999999999999999987754 556666655 554557


Q ss_pred             ceeEEEEecc
Q 009414          525 PLTVRVHARR  534 (535)
Q Consensus       525 ~~~v~~~~r~  534 (535)
                      ++.|.+++|.
T Consensus       525 ~~~~~~~~~~  534 (543)
T PLN02971        525 PLVMVGELRL  534 (543)
T ss_pred             cceeeeeecC
Confidence            9999999983


No 4  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.7e-77  Score=600.17  Aligned_cols=460  Identities=32%  Similarity=0.603  Sum_probs=378.4

Q ss_pred             CCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhh
Q 009414           67 SKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYS  144 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~  144 (535)
                      .+.||||+++|++||++.+...++.++.+++++|  |++|++++|+.++|+|+||+.+++++.+  ..|++++.......
T Consensus        30 ~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~  107 (504)
T PLN00110         30 RKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRY--GPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATH  107 (504)
T ss_pred             CCCcccCCCCCeeechhhcCCchHHHHHHHHHHh--CCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhh
Confidence            4569999999999999888767899999999999  8999999999999999999999999984  46787775443333


Q ss_pred             hhcc-cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHHHHHHH
Q 009414          145 LMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNNMMCSV  221 (535)
Q Consensus       145 ~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~vi~~~~  221 (535)
                      ...| .+.+++.+|+.|+++|+.+..+.|++++++.+.+.+.++++.+++.+.+.  +++++|+.+++..+++|+++.++
T Consensus       108 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~  187 (504)
T PLN00110        108 LAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVI  187 (504)
T ss_pred             hccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHH
Confidence            3333 44556668999999999996568999999999999999999999998753  56789999999999999999999


Q ss_pred             hcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCC
Q 009414          222 FGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQ  301 (535)
Q Consensus       222 fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  301 (535)
                      ||.++..   ..+.+..++...+...........+.+++|++.+++.....+...+..+.+.+++.+.++++++......
T Consensus       188 fg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  264 (504)
T PLN00110        188 LSRRVFE---TKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHERK  264 (504)
T ss_pred             hCCcccc---cCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            9998722   1122345566666666554433334456676655432233455666778888888888888776543222


Q ss_pred             CCCcHHHHHhccCC---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhh
Q 009414          302 RNSDFVDVLLSLSG---PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESD  378 (535)
Q Consensus       302 ~~~d~l~~ll~~~~---~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~  378 (535)
                      .+.|+++.+++..+   +.+++++++.+++..+++||+|||+++++|++++|++||++|+++++|+++++++.+.+++++
T Consensus       265 ~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~  344 (504)
T PLN00110        265 GNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESD  344 (504)
T ss_pred             cCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHH
Confidence            23499999997542   236999999999999999999999999999999999999999999999999998777899999


Q ss_pred             ccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCc
Q 009414          379 LQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADM  458 (535)
Q Consensus       379 l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~  458 (535)
                      +++||||+|||+||||++|+++... +|.+.+|++++||.||||+.|.++++++|+||++|+||++|+||||++++....
T Consensus       345 ~~~lpyl~avi~EtlRl~p~~~~~~-~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~  423 (504)
T PLN00110        345 LPKLPYLQAICKESFRKHPSTPLNL-PRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKI  423 (504)
T ss_pred             hhcChHHHHHHHHHhcCCCCccccc-ccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCccc
Confidence            9999999999999999999999743 799999999999999999999999999999999999999999999996542211


Q ss_pred             cccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          459 DISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       459 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      +  .......|+|||.|+|+|+|++||++|+++++|.|+++|++++.++.+.+.....+++..|+.++.|++++|.
T Consensus       424 ~--~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        424 D--PRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             c--cCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccCC
Confidence            0  0112357999999999999999999999999999999999999887655554566788889999999999985


No 5  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=2.1e-77  Score=604.46  Aligned_cols=459  Identities=29%  Similarity=0.559  Sum_probs=374.2

Q ss_pred             CCCCCCCCCCCCCccccccccCC-ChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhh
Q 009414           65 ACSKPIPGPRGLPFIGSMSLMTN-LPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKES  141 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~~~-~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~  141 (535)
                      ++.+.||||+++|++||++.+.. ++..++.+++++|  |++|++++|+.++|+++||+.+++|+.+  ..|.+++....
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~y--G~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~  102 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLY--GPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKG  102 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHc--CCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            34667999999999999988864 6888999999999  9999999999999999999999999974  46888776543


Q ss_pred             hhh-hhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHHHH
Q 009414          142 AYS-LMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNNMM  218 (535)
Q Consensus       142 ~~~-~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~vi~  218 (535)
                      ... ...+..+.+...++.|+++|+.+..++|++++++.+.+.+++.++++++.+.+.  +++++|+.+.+..+++|+++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~  182 (499)
T PLN03234        103 QQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVC  182 (499)
T ss_pred             hhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHH
Confidence            322 223455556667899999999865689999999999999999999999999754  46789999999999999999


Q ss_pred             HHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccc-hhHHHHHHHHhhHHHHHHHHHHHHHHHHhh
Q 009414          219 CSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFD-LQKVRLRSSKLVPQVNRFVNRIIQEHRTTQ  297 (535)
Q Consensus       219 ~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  297 (535)
                      .++||.+++..    .++...+.+.+.+.........+...+|++..+. ..+..++..++.+.+.+++.+.|+++++..
T Consensus       183 ~~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  258 (499)
T PLN03234        183 RQAFGKRYNEY----GTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPN  258 (499)
T ss_pred             HHHhCCccccc----chhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99999988652    2244556666655554433333344556543331 123345677888999999999999876543


Q ss_pred             cCCCCCCcHHHHHhccCCC----CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCC
Q 009414          298 TSLQRNSDFVDVLLSLSGP----DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRP  373 (535)
Q Consensus       298 ~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  373 (535)
                      ..+....|+++.+++..++    +.+++++|.+++..+++||+|||+++++|++|+|++||++|+++|+|+++++++.+.
T Consensus       259 ~~~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~  338 (499)
T PLN03234        259 RPKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGY  338 (499)
T ss_pred             ccCCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCC
Confidence            3222334899998875432    258999999999999999999999999999999999999999999999999987778


Q ss_pred             CChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCC-CCCCCCCCCccCC
Q 009414          374 LTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIY-ADPLKFMPERFVN  452 (535)
Q Consensus       374 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~  452 (535)
                      ++++++++||||+|||+|+||++|+++... +|.+.+|++++||.|||||.|.++++++||||++| +||++|+||||++
T Consensus       339 ~~~~~l~~l~yl~avi~E~lRl~p~~~~~~-~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~  417 (499)
T PLN03234        339 VSEEDIPNLPYLKAVIKESLRLEPVIPILL-HRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMK  417 (499)
T ss_pred             CCHHHHhcChHHHHHHHHHhccCCCccccC-CcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcC
Confidence            999999999999999999999999999753 69999999999999999999999999999999999 8999999999997


Q ss_pred             CCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCC-C--CCccccccccccccCceeEE
Q 009414          453 PEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYD-P--VDLSEVLRLSCEMKNPLTVR  529 (535)
Q Consensus       453 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~--~~~~~~~~~~~~~~~~~~v~  529 (535)
                      +....   ........|+|||.|+|+|+|+++|++|+++++|.++++|+|++.++. +  .......+++..|++++.+.
T Consensus       418 ~~~~~---~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (499)
T PLN03234        418 EHKGV---DFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLA  494 (499)
T ss_pred             CCCCc---CcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEE
Confidence            54211   111235679999999999999999999999999999999999998763 2  33444667777787766666


Q ss_pred             EEec
Q 009414          530 VHAR  533 (535)
Q Consensus       530 ~~~r  533 (535)
                      .++|
T Consensus       495 ~~~~  498 (499)
T PLN03234        495 PTKH  498 (499)
T ss_pred             eecC
Confidence            6654


No 6  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=4.3e-77  Score=602.62  Aligned_cols=463  Identities=35%  Similarity=0.628  Sum_probs=375.4

Q ss_pred             CCCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhh
Q 009414           66 CSKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAY  143 (535)
Q Consensus        66 ~~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~  143 (535)
                      ..+.||||+++|++||++.+..+++.++.+++++|  |++|++++|+.++++++||+.+++++.+  ..|.+++......
T Consensus        32 ~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~  109 (517)
T PLN02687         32 KRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTY--GPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAE  109 (517)
T ss_pred             CCCCCccCCCCCccccHHhcCCchhHHHHHHHHHh--CCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchh
Confidence            34568999999999999888777899999999999  8999999999999999999999999984  5778776543322


Q ss_pred             hhh-cccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh-CCCceeHHHHHHHHHHHHHHHHH
Q 009414          144 SLM-FNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY-GGSAFRLRDILKPASLNNMMCSV  221 (535)
Q Consensus       144 ~~~-~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~-~~~~vdl~~~~~~~~~~vi~~~~  221 (535)
                      ... .+.+.+++.+|+.|+++|+.+.+++|+.++++.+.+.++++++++++.|.+. +++++|+.++++.+++|+++..+
T Consensus       110 ~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~  189 (517)
T PLN02687        110 HMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAM  189 (517)
T ss_pred             hhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence            211 1346667768999999999995478999999999999999999999999764 45689999999999999999999


Q ss_pred             hcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcC-C
Q 009414          222 FGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTS-L  300 (535)
Q Consensus       222 fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~  300 (535)
                      ||.++....  .+.....+.+.+.............+++|++.++++....++..+..+.+.+++.+.++++++.... +
T Consensus       190 fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~  267 (517)
T PLN02687        190 VGRRVFAGD--GDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGS  267 (517)
T ss_pred             hCccccccC--CcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence            999975422  1223455666666665544433333556765544322234455667788889999999988876432 1


Q ss_pred             CCCCcHHHHHhccCCC-------CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCC
Q 009414          301 QRNSDFVDVLLSLSGP-------DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRP  373 (535)
Q Consensus       301 ~~~~d~l~~ll~~~~~-------~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  373 (535)
                      +...|+++.+++..++       ..++++++.+++..+++||+|||+++++|++|+|++||++|+++++|+++++++++.
T Consensus       268 ~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~  347 (517)
T PLN02687        268 EEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRL  347 (517)
T ss_pred             cccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCC
Confidence            2334999999986432       359999999999999999999999999999999999999999999999999987778


Q ss_pred             CChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCC
Q 009414          374 LTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNP  453 (535)
Q Consensus       374 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  453 (535)
                      ++++++++||||+|||+||||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||+++
T Consensus       348 ~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~  426 (517)
T PLN02687        348 VSESDLPQLTYLQAVIKETFRLHPSTPLSL-PRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPG  426 (517)
T ss_pred             CCHHHhhhCHHHHHHHHHHHccCCCccccc-cccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCC
Confidence            999999999999999999999999999733 7999999999999999999999999999999999999999999999975


Q ss_pred             CCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCC-Cc--cccccccccccCceeEEE
Q 009414          454 EAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPV-DL--SEVLRLSCEMKNPLTVRV  530 (535)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~-~~--~~~~~~~~~~~~~~~v~~  530 (535)
                      +... +......+..|+|||.|+|+|+|++||++|+++++|.||++|++++.++... ++  ....+++..+..++.|++
T Consensus       427 ~~~~-~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (517)
T PLN02687        427 GEHA-GVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHP  505 (517)
T ss_pred             CCcc-ccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEee
Confidence            3211 0011123457999999999999999999999999999999999999876321 22  223455555666788888


Q ss_pred             Eecc
Q 009414          531 HARR  534 (535)
Q Consensus       531 ~~r~  534 (535)
                      ++|.
T Consensus       506 ~~R~  509 (517)
T PLN02687        506 RPRL  509 (517)
T ss_pred             ccCC
Confidence            8773


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=3.6e-77  Score=603.02  Aligned_cols=451  Identities=34%  Similarity=0.612  Sum_probs=362.3

Q ss_pred             CCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhh
Q 009414           67 SKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYS  144 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~  144 (535)
                      .+.||||+++|++||++.+....+.++.+++++|  |++|++++|+.++|+|+||+.+++|+.+  ..|++++.......
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~  112 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQY--GGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISY  112 (516)
T ss_pred             CCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHh--CCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhc
Confidence            4579999999999999887666778899999999  9999999999999999999999999984  55777665332222


Q ss_pred             hhcc-cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHhc
Q 009414          145 LMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFG  223 (535)
Q Consensus       145 ~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG  223 (535)
                      ...+ .+.+++.+|+.|+++|+.+.+++|+.+.++.+.+.+ ++++.+++.+.+..++++|+.+++.++++|+++.++||
T Consensus       113 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~fG  191 (516)
T PLN02183        113 LTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAAFG  191 (516)
T ss_pred             cccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHhhc
Confidence            2222 344566699999999999657899999999988864 67899999997655678999999999999999999999


Q ss_pred             ccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcC----
Q 009414          224 RKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTS----  299 (535)
Q Consensus       224 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----  299 (535)
                      .+++.       ...++.+.+...............+|++.++.+....++..+..+.+.+++.+.++++.++...    
T Consensus       192 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  264 (516)
T PLN02183        192 SSSNE-------GQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNAD  264 (516)
T ss_pred             Ccccc-------hHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            87643       2234555555544443334445567776554333334566677788888888888877653221    


Q ss_pred             ---CCCCCcHHHHHhccCCC-------------CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHH
Q 009414          300 ---LQRNSDFVDVLLSLSGP-------------DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSE  363 (535)
Q Consensus       300 ---~~~~~d~l~~ll~~~~~-------------~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~E  363 (535)
                         ++...|+++.+++...+             ..++++++.+++..+++||+|||+++++|++|+|++||++|+|+++|
T Consensus       265 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~E  344 (516)
T PLN02183        265 NDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQE  344 (516)
T ss_pred             cccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence               11224899999874321             25899999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCC
Q 009414          364 LDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPL  443 (535)
Q Consensus       364 i~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  443 (535)
                      ++++++.++.++++++++||||+|||+||||++|++|+.  .|.+.+|++++||.|||||+|.++.+++||||++|+||+
T Consensus       345 i~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~--~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~  422 (516)
T PLN02183        345 LADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL--LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPD  422 (516)
T ss_pred             HHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce--eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCcc
Confidence            999998667789999999999999999999999999987  799999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCC---CCccccccccc
Q 009414          444 KFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDP---VDLSEVLRLSC  520 (535)
Q Consensus       444 ~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~  520 (535)
                      +|+||||++++...    .......|+|||+|+|+|+|++||++|+++++|+++++|++++.++..   .+.....+.+.
T Consensus       423 ~F~PeRfl~~~~~~----~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  498 (516)
T PLN02183        423 TFKPSRFLKPGVPD----FKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTA  498 (516)
T ss_pred             ccCchhhCCCCCcc----ccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcccccc
Confidence            99999999654211    112346799999999999999999999999999999999999877642   22223345554


Q ss_pred             cccCceeEEEEec
Q 009414          521 EMKNPLTVRVHAR  533 (535)
Q Consensus       521 ~~~~~~~v~~~~r  533 (535)
                      .+.+++.+.+++|
T Consensus       499 ~~~~~~~~~~~~r  511 (516)
T PLN02183        499 PRATRLVAVPTYR  511 (516)
T ss_pred             ccCCCcEEEeecC
Confidence            4555777777766


No 8  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=7.5e-77  Score=602.13  Aligned_cols=469  Identities=32%  Similarity=0.564  Sum_probs=378.6

Q ss_pred             CCCCCCCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCch
Q 009414           62 GSKACSKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVK  139 (535)
Q Consensus        62 ~~~~~~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~  139 (535)
                      +.+++.+.||||+++|++||++++..+++.++.+++++|  |++|++++|+.++++++||+.+++|+.+  ..|++++..
T Consensus        26 ~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~ky--G~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~  103 (514)
T PLN03112         26 SMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKY--GPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRT  103 (514)
T ss_pred             cccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHh--CCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCc
Confidence            345567789999999999999988777899999999999  9999999999999999999999999963  577777664


Q ss_pred             hhhhhhhccc-ceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHH
Q 009414          140 ESAYSLMFNR-AIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNN  216 (535)
Q Consensus       140 ~~~~~~~~g~-~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~v  216 (535)
                      .......+|. +.++..+|+.|+++|+.+.++.|+.++++.+.+.+.+.++.+++.+.+.  +++.+|+.+.++++++++
T Consensus       104 ~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~v  183 (514)
T PLN03112        104 LAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNN  183 (514)
T ss_pred             ccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHH
Confidence            3333334443 3445668999999999976778999999999999999999999987653  456899999999999999


Q ss_pred             HHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009414          217 MMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTT  296 (535)
Q Consensus       217 i~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  296 (535)
                      ++.++||.++........++...+.+.+...+..........++|++.++.+....++..+..+.+.+++...++++++.
T Consensus       184 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  263 (514)
T PLN03112        184 VTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRA  263 (514)
T ss_pred             HHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999875422111123455666666655443333334456765554333344566677888888999999887764


Q ss_pred             hcC---CCCCCcHHHHHhccCCCC---CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcC
Q 009414          297 QTS---LQRNSDFVDVLLSLSGPD---RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGR  370 (535)
Q Consensus       297 ~~~---~~~~~d~l~~ll~~~~~~---~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  370 (535)
                      .+.   +....|+++.++++..++   .++++++.+++..+++||+|||+++++|++|+|++||++|+++|+||++++++
T Consensus       264 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~  343 (514)
T PLN03112        264 RSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGR  343 (514)
T ss_pred             hcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCC
Confidence            321   122349999999864322   48999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCcc
Q 009414          371 SRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERF  450 (535)
Q Consensus       371 ~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~  450 (535)
                      ++.++++++++||||+|||+||||++|+++... +|.+.+|++++|+.||||+.|.++++++|+||++|+||++|+||||
T Consensus       344 ~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~-~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf  422 (514)
T PLN03112        344 NRMVQESDLVHLNYLRCVVRETFRMHPAGPFLI-PHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERH  422 (514)
T ss_pred             CCcCChhhhccCcHHHHHHHHHhccCCCccccc-ccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCccc
Confidence            778999999999999999999999999999743 7999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCC---CCCccccccccccccCcee
Q 009414          451 VNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYD---PVDLSEVLRLSCEMKNPLT  527 (535)
Q Consensus       451 l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~  527 (535)
                      ..+...... ........|+|||.|+|+|+|++||++|++++++.+|++|+|++.++.   +++.....+++..+.+++.
T Consensus       423 ~~~~~~~~~-~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (514)
T PLN03112        423 WPAEGSRVE-ISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLR  501 (514)
T ss_pred             CCCCCCccc-cccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeE
Confidence            654211100 001134579999999999999999999999999999999999987652   2333345567777778999


Q ss_pred             EEEEecc
Q 009414          528 VRVHARR  534 (535)
Q Consensus       528 v~~~~r~  534 (535)
                      +++.||.
T Consensus       502 ~~~~~r~  508 (514)
T PLN03112        502 AVATPRL  508 (514)
T ss_pred             EEeecCC
Confidence            9999985


No 9  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.7e-77  Score=602.54  Aligned_cols=449  Identities=22%  Similarity=0.379  Sum_probs=362.4

Q ss_pred             CCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhh
Q 009414           67 SKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYS  144 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~  144 (535)
                      .+.+|||+++|++||+..+..+++..+.+++++|  |++|++++|+.++|+++||+.+++|+.+  ..|.+++.......
T Consensus        28 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~  105 (482)
T PTZ00404         28 KNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKY--GGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKH  105 (482)
T ss_pred             CCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHh--CCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeee
Confidence            5669999999999999888778999999999999  9999999999999999999999999984  45766665443322


Q ss_pred             hhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHHHHHHHh
Q 009414          145 LMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNNMMCSVF  222 (535)
Q Consensus       145 ~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~vi~~~~f  222 (535)
                      ..+|++++.. +|+.|+++|+.+ ++.|+..+++.+.+.+.+.++.+++.|.+.  +++.+|+.+++.++++|+++.++|
T Consensus       106 ~~~~~~l~~~-~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~f  183 (482)
T PTZ00404        106 GTFYHGIVTS-SGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIF  183 (482)
T ss_pred             eccCCceecc-ChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHh
Confidence            3346777554 999999999999 689999999999999999999999999764  466799999999999999999999


Q ss_pred             cccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCC
Q 009414          223 GRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQR  302 (535)
Q Consensus       223 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  302 (535)
                      |.+++......++....+.+.+...+...........++++..+ .........+..+.+.+++.+.+++++++.+....
T Consensus       184 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  262 (482)
T PTZ00404        184 NEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPEVP  262 (482)
T ss_pred             ccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCc
Confidence            99876521111123355666666665544333222333332221 11112223445667777777777766554332223


Q ss_pred             CCcHHHHHhccCCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccC
Q 009414          303 NSDFVDVLLSLSGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQS  381 (535)
Q Consensus       303 ~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~  381 (535)
                      + |+++.+++...+ .....+++.+++..+++||+|||+++++|++|+|++||++|+|+++|++++++++..++++++++
T Consensus       263 ~-dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~  341 (482)
T PTZ00404        263 R-DLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQS  341 (482)
T ss_pred             c-cHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCcccccc
Confidence            3 999999986432 12223358899999999999999999999999999999999999999999998767789999999


Q ss_pred             CCchhHHHHhhhcCCCCCCccccccccccccee-cCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccc
Q 009414          382 MVYLPAVVKEVVRLHPPGPLLSWARLAITDTTV-DHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDI  460 (535)
Q Consensus       382 lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~  460 (535)
                      ||||+|||+||||++|+++... +|.+.+|+++ +||.||||+.|.++.+++|+||++|+||++|+||||++..      
T Consensus       342 L~yl~avi~EtlRl~p~~~~~~-~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~------  414 (482)
T PTZ00404        342 TPYTVAIIKETLRYKPVSPFGL-PRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD------  414 (482)
T ss_pred             ChHHHHHHHHHHHhcCCccccc-ceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC------
Confidence            9999999999999999999633 7999999999 9999999999999999999999999999999999998642      


Q ss_pred             cccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEec
Q 009414          461 SLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR  533 (535)
Q Consensus       461 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  533 (535)
                          ....|+|||.|+|+|+|++||++|++++++.++++|++++.++++.+.....+++..| .++.|++++|
T Consensus       415 ----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R  482 (482)
T PTZ00404        415 ----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLKP-NKFKVLLEKR  482 (482)
T ss_pred             ----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeecC-CCceeeeecC
Confidence                3468999999999999999999999999999999999998776554444455676664 7899999987


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=8.9e-76  Score=593.29  Aligned_cols=458  Identities=26%  Similarity=0.442  Sum_probs=362.0

Q ss_pred             CCCCCCCCCCCccccccccC---CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhh
Q 009414           67 SKPIPGPRGLPFIGSMSLMT---NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKES  141 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~---~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~  141 (535)
                      .+.||||+++|++||++.+.   ..++..+.+++++|  |++|++++|+.++++|+||+++++++.+  ..|++++....
T Consensus        34 ~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         34 RRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARY--GPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHh--CCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            45699999999999997664   35788999999999  8999999999999999999999999973  56777765432


Q ss_pred             hhhhhcc-cceee-CcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHHH
Q 009414          142 AYSLMFN-RAIGF-APYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNNM  217 (535)
Q Consensus       142 ~~~~~~g-~~~~~-~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~vi  217 (535)
                      . ..+.. .+++. ..+|+.|+++||.+.++.|+.++++.+.+.+.+.++.+++.|.+.  +++.+|+.+.+..++.+++
T Consensus       112 ~-~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        112 S-RLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             h-hhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence            1 22222 23333 368999999998655899999999999999999999999999764  2346899999999999999


Q ss_pred             HHHHhcccccccCCCCchHHHHHHHHHHHHHHhc-cccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009414          218 MCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLL-GKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTT  296 (535)
Q Consensus       218 ~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  296 (535)
                      +.++||.+++.      .....+........... ........+|++.+.......++..+..+.+.+++..+++++++.
T Consensus       191 ~~~~fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (519)
T PLN00168        191 VLMCFGERLDE------PAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREY  264 (519)
T ss_pred             HHHHcCCCcCh------hhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999988754      12223333333222211 122233456654332112233455667888999999999987764


Q ss_pred             hc---C-C-------CCCCcHHHHHhccCC----CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHH
Q 009414          297 QT---S-L-------QRNSDFVDVLLSLSG----PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVH  361 (535)
Q Consensus       297 ~~---~-~-------~~~~d~l~~ll~~~~----~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr  361 (535)
                      .+   . +       ....|+++.|++...    +..++++++.+++.++++||+|||+++++|++++|++||++|++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~  344 (519)
T PLN00168        265 KNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLH  344 (519)
T ss_pred             hhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            21   0 0       013389999997542    2359999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCC-CCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCC
Q 009414          362 SELDQVVGRS-RPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYA  440 (535)
Q Consensus       362 ~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~  440 (535)
                      +||+++++++ +.++++++++||||+|||+||||++|+++... +|.+.+|++++||.||||+.|.++++++|+||++|+
T Consensus       345 ~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~-~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~  423 (519)
T PLN00168        345 DEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVL-PHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWE  423 (519)
T ss_pred             HHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccC-CccCCCCccCCCEEECCCCEEEEChHHHhcCccccC
Confidence            9999999753 67899999999999999999999999998754 799999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccc
Q 009414          441 DPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSC  520 (535)
Q Consensus       441 ~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  520 (535)
                      ||++|+||||+++............+..|+|||.|+|+|+|++||++|++++++.||++|+|++.++.+.+.....+++.
T Consensus       424 ~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  503 (519)
T PLN00168        424 RPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTT  503 (519)
T ss_pred             CccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEE
Confidence            99999999999753211000011134579999999999999999999999999999999999998765444433345666


Q ss_pred             cccCceeEEEEecc
Q 009414          521 EMKNPLTVRVHARR  534 (535)
Q Consensus       521 ~~~~~~~v~~~~r~  534 (535)
                      .++++++|++++|+
T Consensus       504 ~~~~~~~~~~~~R~  517 (519)
T PLN00168        504 VMAKPLRARLVPRR  517 (519)
T ss_pred             eecCCcEEEEEecc
Confidence            77789999999986


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.3e-75  Score=589.09  Aligned_cols=457  Identities=28%  Similarity=0.484  Sum_probs=356.8

Q ss_pred             CCCCCCCCCCCccccccccCCC-hhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhh
Q 009414           67 SKPIPGPRGLPFIGSMSLMTNL-PHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAY  143 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~~~-~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~  143 (535)
                      ++.||||+++|++||++.+..+ .+..+.+++++|  |++|++++|+.++|+|+||+.+++++.+  ..|.+++... ..
T Consensus        29 ~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~y--G~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~-~~  105 (503)
T PLN02394         29 LKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKY--GDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNV-VF  105 (503)
T ss_pred             CCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHh--CCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcc-hH
Confidence            6679999999999999888644 578999999999  9999999999999999999999999973  4566654322 22


Q ss_pred             hhhcc--cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh---CCCceeHHHHHHHHHHHHHH
Q 009414          144 SLMFN--RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY---GGSAFRLRDILKPASLNNMM  218 (535)
Q Consensus       144 ~~~~g--~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~---~~~~vdl~~~~~~~~~~vi~  218 (535)
                      ..+.|  .+.+++.+|+.|+++||.+..+.|+++.++.+.+.++++++++++.+.+.   .++.+++.+.++.+++|+++
T Consensus       106 ~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~  185 (503)
T PLN02394        106 DIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMY  185 (503)
T ss_pred             hHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHH
Confidence            23333  34556668999999999985589999999999999999999999999764   24468999999999999999


Q ss_pred             HHHhcccccccCCCCchHHHHHHHHHHHHHHhccc--cccccccccccccchhHHHHHHHHhhHHHHH-HHHHHHHHHHH
Q 009414          219 CSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGK--LNFSDHLPWLADFDLQKVRLRSSKLVPQVNR-FVNRIIQEHRT  295 (535)
Q Consensus       219 ~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~  295 (535)
                      .++||.+++.   ..++....+.....+.......  .....++|++.+. .....+........... +....++++++
T Consensus       186 ~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (503)
T PLN02394        186 RMMFDRRFES---EDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYFVDERKK  261 (503)
T ss_pred             HHHhCCCccc---ccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999876   2222333333333332222211  1223344544322 11112222222222222 33445666654


Q ss_pred             hhc----CCCCCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCC
Q 009414          296 TQT----SLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRS  371 (535)
Q Consensus       296 ~~~----~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~  371 (535)
                      ..+    ..+...|+++.++++.+++.++++++..++..+++||+|||+++++|++|+|++||++|++||+||+++++.+
T Consensus       262 ~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~  341 (503)
T PLN02394        262 LMSAKGMDKEGLKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPG  341 (503)
T ss_pred             HhhhccCCcchhhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC
Confidence            321    1112248999999987666799999999999999999999999999999999999999999999999999876


Q ss_pred             CCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccC
Q 009414          372 RPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFV  451 (535)
Q Consensus       372 ~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  451 (535)
                      ..++++++++||||+|||+|+||++|++|... +|.+.+|++++||.|||||.|.+++|++|+||++|+||++|+||||+
T Consensus       342 ~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~-~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl  420 (503)
T PLN02394        342 NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLV-PHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFL  420 (503)
T ss_pred             CCCCHhHHhhCHHHHHHHHHHHhcCCCccccc-ceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccC
Confidence            77899999999999999999999999999864 68999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCC-CCcccccc-ccccccCceeEE
Q 009414          452 NPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDP-VDLSEVLR-LSCEMKNPLTVR  529 (535)
Q Consensus       452 ~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~-~~~~~~~~~~v~  529 (535)
                      ++++..   ........|+|||.|+|+|+|++||++|+++++|.++++|++++.+|.+ .+.....+ +....+.++.|+
T Consensus       421 ~~~~~~---~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (503)
T PLN02394        421 EEEAKV---EANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVV  497 (503)
T ss_pred             CCCCcc---cccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEE
Confidence            654211   0111346799999999999999999999999999999999999988763 44444453 455456799999


Q ss_pred             EEecc
Q 009414          530 VHARR  534 (535)
Q Consensus       530 ~~~r~  534 (535)
                      +.+|.
T Consensus       498 ~~~r~  502 (503)
T PLN02394        498 FKPRS  502 (503)
T ss_pred             eecCC
Confidence            99996


No 12 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=7.1e-76  Score=595.31  Aligned_cols=440  Identities=21%  Similarity=0.336  Sum_probs=354.9

Q ss_pred             CCCCCCCCCccccccccCC-------------------ChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhc
Q 009414           69 PIPGPRGLPFIGSMSLMTN-------------------LPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILN  129 (535)
Q Consensus        69 ~~PgP~~~P~iG~~~~~~~-------------------~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~  129 (535)
                      .||||+++|++||++++..                   +....+.+|+++|  |++|++++|+.++|+|+||+.+++++.
T Consensus        43 ~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         43 GVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQY--GKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             CCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHh--CCeEEEccCCccEEEECCHHHHHHHHh
Confidence            3999999999999987642                   2233578899999  999999999999999999999999998


Q ss_pred             C-CCCCCCCchhh-hhhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh---CCCcee
Q 009414          130 S-SVFADRPVKES-AYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY---GGSAFR  204 (535)
Q Consensus       130 ~-~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~---~~~~vd  204 (535)
                      + ..+..++.... ......|.++++. +|+.|+++|+.+ .+.|+.++++.+.+.+.++++++++.+.+.   +++.+|
T Consensus       121 ~~~~~~~r~~~~~~~~~~~~g~~l~~~-~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd  198 (516)
T PLN02290        121 KYNTVTGKSWLQQQGTKHFIGRGLLMA-NGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVE  198 (516)
T ss_pred             cCCCCCCCcchhhhHHHHHhcCCcccc-CchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence            5 34555553321 1223456777555 899999999999 689999999999999999999999999764   235799


Q ss_pred             HHHHHHHHHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHH
Q 009414          205 LRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNR  284 (535)
Q Consensus       205 l~~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~  284 (535)
                      +.++++++++|+++.++||.+++.   .  +..   .+.+...............+|++.+++ ....+...+..+.+.+
T Consensus       199 ~~~~~~~~~~~vi~~~~fG~~~~~---~--~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~  269 (516)
T PLN02290        199 IGEYMTRLTADIISRTEFDSSYEK---G--KQI---FHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVER  269 (516)
T ss_pred             hHHHHHHHHHHHHHHHHcCCcccc---c--hHH---HHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHHH
Confidence            999999999999999999988754   1  122   222222222111111112345444442 3334556667788899


Q ss_pred             HHHHHHHHHHHhhcCC---CCCCcHHHHHhccCCC-----CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHH
Q 009414          285 FVNRIIQEHRTTQTSL---QRNSDFVDVLLSLSGP-----DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDI  356 (535)
Q Consensus       285 ~~~~~i~~~~~~~~~~---~~~~d~l~~ll~~~~~-----~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~  356 (535)
                      ++.+.|+++++..+.+   ....|+++.+++..++     ..++++++.+++.++++||+|||+++++|++++|++||++
T Consensus       270 ~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~v  349 (516)
T PLN02290        270 LLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTW  349 (516)
T ss_pred             HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHH
Confidence            9999999887653321   1234999999875321     2478999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCC
Q 009414          357 QSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDP  436 (535)
Q Consensus       357 ~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~  436 (535)
                      |+++|+||+++++++ .++++++++||||+|||+||||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||
T Consensus       350 q~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~--~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp  426 (516)
T PLN02290        350 QDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLL--PRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSE  426 (516)
T ss_pred             HHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCcccc--ceeecCCeeECCEEECCCCEEEecHHHhcCCh
Confidence            999999999999864 789999999999999999999999999976  89999999999999999999999999999999


Q ss_pred             CCC-CCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCcccc
Q 009414          437 EIY-ADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEV  515 (535)
Q Consensus       437 ~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~  515 (535)
                      ++| +||++|+||||++++.        .....|+|||.|+|+|+|++||++|++++++.++++|++++.++.+  ....
T Consensus       427 ~~~~~dP~~F~PeRfl~~~~--------~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~--~~~~  496 (516)
T PLN02290        427 ELWGKDANEFNPDRFAGRPF--------APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR--HAPV  496 (516)
T ss_pred             hhhCCChhhcCccccCCCCC--------CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc--cCcc
Confidence            999 8999999999995321        1235799999999999999999999999999999999999877532  2233


Q ss_pred             ccccccccCceeEEEEecc
Q 009414          516 LRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       516 ~~~~~~~~~~~~v~~~~r~  534 (535)
                      .+++..|++++.|++++|+
T Consensus       497 ~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        497 VVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             ceeeecCCCCCeEEEEeCC
Confidence            4688899999999999986


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=8.3e-76  Score=584.07  Aligned_cols=448  Identities=26%  Similarity=0.433  Sum_probs=369.0

Q ss_pred             CCCCCCCCCCCccccccccCC---ChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhc--CCCCCCCCchhh
Q 009414           67 SKPIPGPRGLPFIGSMSLMTN---LPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILN--SSVFADRPVKES  141 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~~---~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~--~~~~~~~~~~~~  141 (535)
                      ...||||+++|++|++..+.+   ....++.++..+|  |++|+.++||.++++++||+.+++|+.  +..+.+.+.+..
T Consensus        34 ~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~  111 (497)
T KOG0157|consen   34 KKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRY--GPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPE  111 (497)
T ss_pred             hccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHc--CchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHH
Confidence            456999999999999988853   5778889999999  899999999999999999999999997  366777777777


Q ss_pred             hhhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhC-CCceeHHHHHHHHHHHHHHHH
Q 009414          142 AYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYG-GSAFRLRDILKPASLNNMMCS  220 (535)
Q Consensus       142 ~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~-~~~vdl~~~~~~~~~~vi~~~  220 (535)
                      ....++|.|++++ +|+.|+++|+++ .+.|+...++.+...+.+.+..++..+.... ++.+|+.+.++++++|+++.+
T Consensus       112 ~~~~~lG~gll~~-~g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~  189 (497)
T KOG0157|consen  112 SLKPWLGDGLLFS-DGEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKT  189 (497)
T ss_pred             HHHHHhcCccccC-CchHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHH
Confidence            7778888899888 599999999999 7899999999999999999999888877653 333999999999999999999


Q ss_pred             HhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccc-cccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcC
Q 009414          221 VFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLP-WLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTS  299 (535)
Q Consensus       221 ~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  299 (535)
                      +||.....   ...++..++.+++..........   ...| +..++...+..++..++.+.++++++++|++|++....
T Consensus       190 ~~G~~~~~---~~~~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~  263 (497)
T KOG0157|consen  190 AMGPESLD---AEGPELFEYVQAFDDLTELISKR---INLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEK  263 (497)
T ss_pred             hcCCcccc---ccCCcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99922211   12223344555555433332221   2233 33333223367888899999999999999999976432


Q ss_pred             C-----CCCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCC-
Q 009414          300 L-----QRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRP-  373 (535)
Q Consensus       300 ~-----~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~-  373 (535)
                      +     ....|+++.+....+ +.+++++|.+++.++++||+||||++++|++++|+.||++|+++++|+++++++... 
T Consensus       264 ~~~~~~~~~~d~L~~~~~~~~-~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~  342 (497)
T KOG0157|consen  264 EGSGEEKKRLDFLDTLLLEED-KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDK  342 (497)
T ss_pred             cCCcccchhhhHHHHHHHhcc-CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCC
Confidence            1     223488886333333 679999999999999999999999999999999999999999999999999975332 


Q ss_pred             CChhhccCCCchhHHHHhhhcCCCCCCccccccccccccee-cCeeeCCCCEEEEehhhhhcCCCCCC-CCCCCCCCccC
Q 009414          374 LTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTV-DHYHVPAGTTAMVNIWAIMRDPEIYA-DPLKFMPERFV  451 (535)
Q Consensus       374 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~F~P~R~l  451 (535)
                      .+..+.++|+||++||+||||||||+|..  .|.+.+|+++ +||.||||+.|.++++++|||+.+|+ ||++||||||+
T Consensus       343 ~~~~~~~~m~yl~~vi~EsLRLyppvp~~--~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~  420 (497)
T KOG0157|consen  343 WEVEKLDQMKYLEMVIKESLRLYPPVPLV--ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFL  420 (497)
T ss_pred             CChhhhhhhHHHHHHHHHHhccCCCCchh--hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccC
Confidence            23333346999999999999999999998  8999999999 58999999999999999999999996 99999999999


Q ss_pred             CCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEE
Q 009414          452 NPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVH  531 (535)
Q Consensus       452 ~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  531 (535)
                      +++...     ..++++|+|||+|+|.|+|++||++|++++++.++++|+|++..+..  ..+....+.+|+++++|+++
T Consensus       421 ~~~~~~-----~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~  493 (497)
T KOG0157|consen  421 DGEEKA-----KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLR  493 (497)
T ss_pred             CCCCcC-----CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEE
Confidence            764221     22568999999999999999999999999999999999999988643  55677899999999999999


Q ss_pred             ecc
Q 009414          532 ARR  534 (535)
Q Consensus       532 ~r~  534 (535)
                      +|.
T Consensus       494 ~r~  496 (497)
T KOG0157|consen  494 PRG  496 (497)
T ss_pred             eCC
Confidence            986


No 14 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.3e-74  Score=582.84  Aligned_cols=455  Identities=27%  Similarity=0.509  Sum_probs=355.8

Q ss_pred             CCCCCCCCCCCccccccccC-CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhh
Q 009414           67 SKPIPGPRGLPFIGSMSLMT-NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAY  143 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~-~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~  143 (535)
                      .+.||||+++|++||++.+. .+++.++.+++++|  |++|++++|+.++++|+||+.+++|+.+  ..|.+++......
T Consensus        28 ~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~y--G~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~  105 (502)
T PLN02966         28 YKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKY--GPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHE  105 (502)
T ss_pred             CCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHh--CCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccce
Confidence            45799999999999998885 47899999999999  9999999999999999999999999984  4566655433221


Q ss_pred             hhhcc-cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHHHHHH
Q 009414          144 SLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNNMMCS  220 (535)
Q Consensus       144 ~~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~vi~~~  220 (535)
                      ....| .++.+..+|+.|+++|+.+.++.|+++.++.+.+.+++.++++++.|.+.  +++.+|+.+++..+++|+++.+
T Consensus       106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~  185 (502)
T PLN02966        106 FISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQ  185 (502)
T ss_pred             eeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHH
Confidence            11123 33445557999999999955789999999999999999999999999764  4567999999999999999999


Q ss_pred             HhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccc-hhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcC
Q 009414          221 VFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFD-LQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTS  299 (535)
Q Consensus       221 ~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  299 (535)
                      +||.+++..   . ++...+.+.+...........+..++|++..+. .....+......+...+++.+.++++.+....
T Consensus       186 ~fG~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (502)
T PLN02966        186 AFGKKYNED---G-EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRV  261 (502)
T ss_pred             HhCCccCcc---c-hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            999988752   2 234556665555554444333444555432221 11112223344556667777777665443221


Q ss_pred             CCCCCcHHHHHhccCCC----CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCC--CC
Q 009414          300 LQRNSDFVDVLLSLSGP----DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRS--RP  373 (535)
Q Consensus       300 ~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~--~~  373 (535)
                      .....|+++.+++..++    .+++++++.+++..+++||+|||+++++|++|+|++||++|+++++||++++++.  ..
T Consensus       262 ~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~  341 (502)
T PLN02966        262 KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTF  341 (502)
T ss_pred             ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCc
Confidence            11223899999875432    3589999999999999999999999999999999999999999999999998742  45


Q ss_pred             CChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCC-CCCCCCCCCccCC
Q 009414          374 LTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIY-ADPLKFMPERFVN  452 (535)
Q Consensus       374 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~  452 (535)
                      ++++++++||||+|||+|+||++|+++... +|.+.+|++++||.|||||.|.+++|++||||++| +||++|+||||++
T Consensus       342 ~~~~dl~~lpyl~avi~E~LRl~p~v~~~~-~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~  420 (502)
T PLN02966        342 VTEDDVKNLPYFRALVKETLRIEPVIPLLI-PRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLE  420 (502)
T ss_pred             CCHhhccCCcHHHHHHHHHhccCCCccccc-CcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcC
Confidence            799999999999999999999999999743 79999999999999999999999999999999999 9999999999996


Q ss_pred             CCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCC---CCccccccccccccCceeEE
Q 009414          453 PEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDP---VDLSEVLRLSCEMKNPLTVR  529 (535)
Q Consensus       453 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~  529 (535)
                      ++..     ....+..|+|||+|+|+|+|++||++|+++++|.+|++|+|++.++..   .+.++..+++..+.+++.++
T Consensus       421 ~~~~-----~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (502)
T PLN02966        421 KEVD-----FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLV  495 (502)
T ss_pred             CCCC-----cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEE
Confidence            5311     112456799999999999999999999999999999999999987642   33344556665444455444


Q ss_pred             EEec
Q 009414          530 VHAR  533 (535)
Q Consensus       530 ~~~r  533 (535)
                      ..+.
T Consensus       496 ~~~~  499 (502)
T PLN02966        496 PEKV  499 (502)
T ss_pred             EEeC
Confidence            4443


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=5.7e-74  Score=572.81  Aligned_cols=452  Identities=23%  Similarity=0.432  Sum_probs=365.5

Q ss_pred             CCCCCCCCccccccccC-CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhhhh
Q 009414           70 IPGPRGLPFIGSMSLMT-NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYSLM  146 (535)
Q Consensus        70 ~PgP~~~P~iG~~~~~~-~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~~~  146 (535)
                      ||||+++|++||++++. .+++.++.+++++|  |++|++++|+.++++|+||+.+++|+.+  ..|++++..... ..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~-~~~   77 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIY--GPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKAL-TVL   77 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHh--CCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHH-HHH
Confidence            78999999999998886 46899999999999  8999999999999999999999999973  677777654333 334


Q ss_pred             cc-c-ceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh----CCCceeHHHHHHHHHHHHHHHH
Q 009414          147 FN-R-AIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY----GGSAFRLRDILKPASLNNMMCS  220 (535)
Q Consensus       147 ~g-~-~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~----~~~~vdl~~~~~~~~~~vi~~~  220 (535)
                      .| . .+.+..+|+.|+++||.+.+++|+...++.+.+.+++.++.+++.+.+.    +++++|+.+.++++++|+++.+
T Consensus        78 ~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~  157 (466)
T PLN02655         78 TRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQ  157 (466)
T ss_pred             hcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHH
Confidence            44 2 2444446999999999887888998889999999999998888888643    4568999999999999999999


Q ss_pred             HhcccccccCCCCch-H---HHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009414          221 VFGRKYALLGYSSNT-E---ARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTT  296 (535)
Q Consensus       221 ~fG~~~~~l~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  296 (535)
                      +||.+++.....+.. .   ...+...+...+.......+.+++|++.+++.....+...+....+.+++..++++++++
T Consensus       158 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  237 (466)
T PLN02655        158 ALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKR  237 (466)
T ss_pred             HhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999987763211100 0   122333344444444333445567766655432233344444455667888888877765


Q ss_pred             hcCCCCCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCCh
Q 009414          297 QTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTE  376 (535)
Q Consensus       297 ~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~  376 (535)
                      ...++...|+++.+++..  ..++++++.+++.++++||+|||+++++|++++|++||++|+++|+||+++.+++. +++
T Consensus       238 ~~~~~~~~d~l~~ll~~~--~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~  314 (466)
T PLN02655        238 IARGEERDCYLDFLLSEA--THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTE  314 (466)
T ss_pred             hcCCCCcccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCH
Confidence            333333348999999865  35899999999999999999999999999999999999999999999999988644 999


Q ss_pred             hhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCC
Q 009414          377 SDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAA  456 (535)
Q Consensus       377 ~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~  456 (535)
                      ++++++|||+|||+||||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++++..
T Consensus       315 ~~l~~l~yl~a~i~EtlRl~p~~~~~~-~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~  393 (466)
T PLN02655        315 EDLPNLPYLNAVFHETLRKYSPVPLLP-PRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYE  393 (466)
T ss_pred             HHHhcChHHHHHHHHHhccCCCcCCCC-CcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcc
Confidence            999999999999999999999999764 6999999999999999999999999999999999999999999999965311


Q ss_pred             CccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEeccC
Q 009414          457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR  535 (535)
Q Consensus       457 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  535 (535)
                      .      .....++|||.|+|+|||++||+.|++++++.||++|++++.++... .....+++..+++++.|++++|.+
T Consensus       394 ~------~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        394 S------ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEE-KEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             c------CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCcc-ccchhheeEeecCCcEEEEeecCC
Confidence            1      12367999999999999999999999999999999999999876432 234567778899999999999874


No 16 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-74  Score=538.88  Aligned_cols=454  Identities=24%  Similarity=0.393  Sum_probs=390.8

Q ss_pred             CCCCCCCCCCCCCCccccccccC----CChhHHHHHHHHHhcCcceEEEE-eCCeeEEEecCHHHHHHHhcC-CCCCCCC
Q 009414           64 KACSKPIPGPRGLPFIGSMSLMT----NLPHHNLAAAAEAYKAKRVMAFS-LGETRVIITCSPDVAKEILNS-SVFADRP  137 (535)
Q Consensus        64 ~~~~~~~PgP~~~P~iG~~~~~~----~~~~~~l~~~~~ky~~G~v~~~~-~g~~~~vvv~dp~~i~~i~~~-~~~~~~~  137 (535)
                      .++...+|||+++|++|.+..+.    .+.|+....++++|  |+||+.. +|+...|+|.||+.++.+|++ +.++.|+
T Consensus        46 ~r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~Y--G~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp  123 (519)
T KOG0159|consen   46 ARPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKY--GPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRP  123 (519)
T ss_pred             cCChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHc--CceeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCcc
Confidence            45677899999999999987442    47899999999999  9999999 888999999999999999996 5678885


Q ss_pred             -chhhh--hhhhcc--cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhC-----CCceeHHH
Q 009414          138 -VKESA--YSLMFN--RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYG-----GSAFRLRD  207 (535)
Q Consensus       138 -~~~~~--~~~~~g--~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~-----~~~vdl~~  207 (535)
                       ..+.+  ....++  .|++. .+|++|++.|..++..++++++++.|.+.+++.++++++.+....     ..+.|+.+
T Consensus       124 ~~~~~w~~~rd~~~~~~Gl~~-~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~  202 (519)
T KOG0159|consen  124 LLIEPWVAYRDFRGGVCGLFL-LEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQ  202 (519)
T ss_pred             cccchhhhhHHhhccCCCccc-CCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHH
Confidence             33322  334444  56644 499999999999999999999999999999999999999998762     23679999


Q ss_pred             HHHHHHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccc-cccccchhHHHHHHHHhhHHHHHHH
Q 009414          208 ILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLP-WLADFDLQKVRLRSSKLVPQVNRFV  286 (535)
Q Consensus       208 ~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~  286 (535)
                      .+.+++++.||.++||+++++++...+++.+.+.+++..++.....+.   +.| +.+++ +.+.+++..++.+.+.++.
T Consensus       203 ~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~---~~p~l~r~~-~t~~wk~~~~~~D~i~~~~  278 (519)
T KOG0159|consen  203 ELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLM---LMPSLWRYF-PTKVWKDFVRAWDQIFDVG  278 (519)
T ss_pred             HHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHH---hcchHHHhC-CChHHHHHHHHHHHHHHHH
Confidence            999999999999999999999988877899999999999998765542   234 44444 6888999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCC-CcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHH
Q 009414          287 NRIIQEHRTTQTSLQRN-SDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELD  365 (535)
Q Consensus       287 ~~~i~~~~~~~~~~~~~-~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~  365 (535)
                      ..+|++..++.+...+. ...-+.+.+......++.+++..++++++.||.||||+++.|+||+|++||++|++|++|+.
T Consensus       279 ~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~  358 (519)
T KOG0159|consen  279 DKYIDNALEELEKQDSAGSEYTGSLLELLLRKELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEIL  358 (519)
T ss_pred             HHHHHHHHHHHHhccccccchhHHHHHHHHHccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence            99999888765432220 12222222222223579999999999999999999999999999999999999999999999


Q ss_pred             HhhcC-CCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCC
Q 009414          366 QVVGR-SRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLK  444 (535)
Q Consensus       366 ~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  444 (535)
                      ++..+ +..++.+++.+||||.||||||+|+||.++++  .|...+|++++||.|||||.|.++.+.+.+||.+|++|++
T Consensus       359 ~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~--~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~  436 (519)
T KOG0159|consen  359 AVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN--GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEE  436 (519)
T ss_pred             hhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc--ccccchhceeccceecCCCeEEEeehhhccChhhCCCccc
Confidence            99987 68899999999999999999999999999998  8999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccC
Q 009414          445 FMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKN  524 (535)
Q Consensus       445 F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  524 (535)
                      |+|||||+++.      ...++..++|||.|+|+|+||+||.+|+.+.||+++++|+++..++  .++.....++..|..
T Consensus       437 F~PeRWL~~~~------~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~--~pv~~~~~~il~P~~  508 (519)
T KOG0159|consen  437 FLPERWLKPST------KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE--EPVEYVYRFILVPNR  508 (519)
T ss_pred             cChhhhccccc------CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC--CCccceeEEEEcCCC
Confidence            99999998762      1236788999999999999999999999999999999999999884  456677888889999


Q ss_pred             ceeEEEEecc
Q 009414          525 PLTVRVHARR  534 (535)
Q Consensus       525 ~~~v~~~~r~  534 (535)
                      ++.+++++|+
T Consensus       509 ~l~f~f~~r~  518 (519)
T KOG0159|consen  509 PLRFKFRPRN  518 (519)
T ss_pred             CcceeeeeCC
Confidence            9999999986


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=4.6e-72  Score=562.91  Aligned_cols=466  Identities=25%  Similarity=0.439  Sum_probs=351.7

Q ss_pred             CCCCCCCCCCCCccccccccC-CChh-HHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhh
Q 009414           66 CSKPIPGPRGLPFIGSMSLMT-NLPH-HNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKES  141 (535)
Q Consensus        66 ~~~~~PgP~~~P~iG~~~~~~-~~~~-~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~  141 (535)
                      ..+.||||+++|++||++++. ..+. .++.+..++|+ |++|++++|++++|+|+||+.+++++.+  ..|++++....
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~-g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~  116 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELK-TDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSI  116 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhC-CCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchh
Confidence            345799999999999998874 2332 45667777764 7999999999999999999999999973  56888775443


Q ss_pred             hhhhhcc-cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHHHH
Q 009414          142 AYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNNMM  218 (535)
Q Consensus       142 ~~~~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~vi~  218 (535)
                      ......+ .++++..+|+.|+++|+.+....++....+.+.+.++.+++++++.+.+.  .++++|+.+.++++++|+++
T Consensus       117 ~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  196 (534)
T PLN03018        117 METIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTM  196 (534)
T ss_pred             hhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHH
Confidence            3222111 35667667999999999995434455555556667777899999999763  45579999999999999999


Q ss_pred             HHHhcccccccCCC--CchH-HHHHHHHHHHHHH---hccccccccccc-cccccchhHHHHHHHHhhHHHHHHHHHHHH
Q 009414          219 CSVFGRKYALLGYS--SNTE-ARRLSRLVEEGYD---LLGKLNFSDHLP-WLADFDLQKVRLRSSKLVPQVNRFVNRIIQ  291 (535)
Q Consensus       219 ~~~fG~~~~~l~~~--~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~  291 (535)
                      .++||.+++.+...  ++.. ...+...+.....   ........+.+| |+.++.......+.......+.+++.+.++
T Consensus       197 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  276 (534)
T PLN03018        197 RMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIID  276 (534)
T ss_pred             HHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence            99999998653211  1111 1112212222221   111122223344 443221112233455556778888899998


Q ss_pred             HHHHhhc--CC-CCCCcHHHHHhccCCCC---CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHH
Q 009414          292 EHRTTQT--SL-QRNSDFVDVLLSLSGPD---RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELD  365 (535)
Q Consensus       292 ~~~~~~~--~~-~~~~d~l~~ll~~~~~~---~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~  365 (535)
                      ++++...  .+ ....|+++.+++..+++   .++++++.+++..+++||+|||+++++|++++|+.||++|+++++||+
T Consensus       277 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  356 (534)
T PLN03018        277 ERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELD  356 (534)
T ss_pred             HHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            8876421  11 12249999999865432   389999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCC
Q 009414          366 QVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKF  445 (535)
Q Consensus       366 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  445 (535)
                      ++++.++.++.+++.+||||+|||+||||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|
T Consensus       357 ~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~-~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F  435 (534)
T PLN03018        357 EVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVP-PHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVY  435 (534)
T ss_pred             HHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccC-CcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCcccc
Confidence            99987778999999999999999999999999999763 69999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCC-CCCccccccccccccC
Q 009414          446 MPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYD-PVDLSEVLRLSCEMKN  524 (535)
Q Consensus       446 ~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~  524 (535)
                      +||||++.+....+......+..|+|||.|+|+|+|++||++|+++++|.|+++|++++.++. +.+.....+.+.. ++
T Consensus       436 ~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-p~  514 (534)
T PLN03018        436 EPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLLM-AK  514 (534)
T ss_pred             CCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccccceec-CC
Confidence            999999654211010111245679999999999999999999999999999999999987753 3333333354444 47


Q ss_pred             ceeEEEEecc
Q 009414          525 PLTVRVHARR  534 (535)
Q Consensus       525 ~~~v~~~~r~  534 (535)
                      +++|++++|.
T Consensus       515 ~~~v~~~~R~  524 (534)
T PLN03018        515 PLLLSVEPRL  524 (534)
T ss_pred             CeEEEEEecc
Confidence            9999999983


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=8.7e-73  Score=568.51  Aligned_cols=435  Identities=18%  Similarity=0.271  Sum_probs=338.8

Q ss_pred             CCCCCCCCCCCCccccccccC-----CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCc
Q 009414           66 CSKPIPGPRGLPFIGSMSLMT-----NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPV  138 (535)
Q Consensus        66 ~~~~~PgP~~~P~iG~~~~~~-----~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~  138 (535)
                      ..+.||||+++|++||++.+.     +.++.++.+++++|  |++|++++|++++|+|+||+++++++.+  ..|..+..
T Consensus        36 ~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~y--G~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         36 RFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRY--GKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             CCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHh--cccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            356799999999999986542     35678899999999  9999999999999999999999999984  33443321


Q ss_pred             hhhhhhhhcc-cceeeCcCChhHHHHHHHhhhccCCHhhhhh-chhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHH
Q 009414          139 KESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINS-AEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNN  216 (535)
Q Consensus       139 ~~~~~~~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~-~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~v  216 (535)
                      .. . ....| .++++. +|+.|+++|+.+ .+.|++.+++. +.+.+.+.+..+++.|.+  ++.+|+.+.++++++|+
T Consensus       114 ~~-~-~~~~g~~~~~~~-~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~~v  187 (490)
T PLN02500        114 RS-I-GGILGKWSMLVL-VGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWKE--NSTFSAQDEAKKFTFNL  187 (490)
T ss_pred             hH-H-HHHhCccccccc-CCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhCC--CCCEEehHHHHHHHHHH
Confidence            11 1 12234 355555 899999999999 58899999987 567888888888887743  45799999999999999


Q ss_pred             HHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009414          217 MMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTT  296 (535)
Q Consensus       217 i~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  296 (535)
                      +++++||.+.+.      .+...+...+..........  ...+|..       ..++..++.+.+.+++.+.++++++.
T Consensus       188 i~~~~fg~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~  252 (490)
T PLN02500        188 MAKHIMSMDPGE------EETEQLKKEYVTFMKGVVSA--PLNFPGT-------AYRKALKSRATILKFIERKMEERIEK  252 (490)
T ss_pred             HHHHHhCCCCCc------hHHHHHHHHHHHHHhhhhcc--hhcCCCc-------ccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999987543      12233333333332221111  1112321       12344556788888999999887764


Q ss_pred             hcCC---CCCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhc----
Q 009414          297 QTSL---QRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVG----  369 (535)
Q Consensus       297 ~~~~---~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~----  369 (535)
                      ...+   ....|+++.+++.   ..++++++.+++..+++||+|||+++++|++++|++||++|+|+|+|++++++    
T Consensus       253 ~~~~~~~~~~~d~l~~ll~~---~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~  329 (490)
T PLN02500        253 LKEEDESVEEDDLLGWVLKH---SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQ  329 (490)
T ss_pred             hhcccCCCCcchHHHHHHhc---cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcccc
Confidence            3221   1234899999874   25899999999999999999999999999999999999999999999999863    


Q ss_pred             -CCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCC
Q 009414          370 -RSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPE  448 (535)
Q Consensus       370 -~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~  448 (535)
                       ++..++++++++||||+|||+||||++|+++.+  +|.+.+|++++||.||||+.|.++.|++||||++|+||++|+||
T Consensus       330 ~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~--~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~Pe  407 (490)
T PLN02500        330 SGESELNWEDYKKMEFTQCVINETLRLGNVVRFL--HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPW  407 (490)
T ss_pred             CCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe--eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChh
Confidence             234689999999999999999999999999987  79999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCcccc-ccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCcee
Q 009414          449 RFVNPEAADMDIS-LMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLT  527 (535)
Q Consensus       449 R~l~~~~~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (535)
                      ||++++....... ....+..|+|||.|+|+|+|++||++|+++++|.++++|+|++.+++.. ..  ...+ .+.++++
T Consensus       408 Rfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~~--~~~~-~~~~~l~  483 (490)
T PLN02500        408 RWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-FA--FPFV-DFPKGLP  483 (490)
T ss_pred             hccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-ee--cccc-cCCCCce
Confidence            9997542110000 0013567999999999999999999999999999999999999775432 11  1233 3457999


Q ss_pred             EEEEe
Q 009414          528 VRVHA  532 (535)
Q Consensus       528 v~~~~  532 (535)
                      |++.+
T Consensus       484 ~~~~~  488 (490)
T PLN02500        484 IRVRR  488 (490)
T ss_pred             EEEEe
Confidence            99875


No 19 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3.2e-72  Score=562.29  Aligned_cols=441  Identities=19%  Similarity=0.299  Sum_probs=339.7

Q ss_pred             CCCCCCCCCccccccccCCC---hhHHHHHHHHHhcCcceEE---EEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchh
Q 009414           69 PIPGPRGLPFIGSMSLMTNL---PHHNLAAAAEAYKAKRVMA---FSLGETRVIITCSPDVAKEILNS--SVFADRPVKE  140 (535)
Q Consensus        69 ~~PgP~~~P~iG~~~~~~~~---~~~~l~~~~~ky~~G~v~~---~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~  140 (535)
                      ..|||+++|++||+..+..+   .++++.+...+|  |..++   .++|+.++++|+||+.+++|+.+  ..|++++...
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~  109 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEAS--NLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFK  109 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhC--CCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHH
Confidence            48999999999999776533   233334444446  65555   67899999999999999999984  4566654433


Q ss_pred             hhhhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhh--chhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHH
Q 009414          141 SAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINS--AEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNN  216 (535)
Q Consensus       141 ~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~--~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~v  216 (535)
                      .. ....|+|++++ +|+.|+++|+.+ .+.|+...++.  +.+.+++.++.+++.+.+.  .++.+|+.+.+.++++|+
T Consensus       110 ~~-~~~~g~gl~~~-~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dv  186 (500)
T PLN02169        110 KI-FDVLGEGILTV-DFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDT  186 (500)
T ss_pred             HH-HHhhcCccccc-CcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHH
Confidence            22 34467888766 899999999999 69999988764  3467778888888888754  456899999999999999


Q ss_pred             HHHHHhcccccccCCCCchHHHHHHHHHHHHHHhcccccccccccccc----ccchhHHHHHHHHhhHHHHHHHHHHHHH
Q 009414          217 MMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA----DFDLQKVRLRSSKLVPQVNRFVNRIIQE  292 (535)
Q Consensus       217 i~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~----~l~~~~~~~~~~~~~~~~~~~~~~~i~~  292 (535)
                      +++++||.+.+++....  ...++...+.........   ..+.|++.    .+.+.+..++..++.+.+++++.+.|++
T Consensus       187 i~~~~fG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~  261 (500)
T PLN02169        187 SSILMTGYDPMSLSIEM--LEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISS  261 (500)
T ss_pred             HHhheeCCCccccCCCC--CCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999876532111  111233333222221111   11223211    1112334566778888999999999998


Q ss_pred             HHHhhc-C---CCCCCcHHHHHhccCCC-----CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHH
Q 009414          293 HRTTQT-S---LQRNSDFVDVLLSLSGP-----DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSE  363 (535)
Q Consensus       293 ~~~~~~-~---~~~~~d~l~~ll~~~~~-----~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~E  363 (535)
                      ++++.. .   ++...|+++.+++...+     .+++++++.+++.++++||+|||+++++|++|+|++||++|+|+++|
T Consensus       262 r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~E  341 (500)
T PLN02169        262 RRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHE  341 (500)
T ss_pred             HHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            876421 1   11124899999886431     14788999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccce-ecCeeeCCCCEEEEehhhhhcCCCCC-CC
Q 009414          364 LDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTT-VDHYHVPAGTTAMVNIWAIMRDPEIY-AD  441 (535)
Q Consensus       364 i~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~-~~g~~ip~G~~v~~~~~~~~~d~~~~-~~  441 (535)
                      |++++      +++++++||||+|||+||||+||++|..  .|.+.+|.+ ++|+.||||+.|.+++|++||||++| +|
T Consensus       342 i~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~--~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~d  413 (500)
T PLN02169        342 INTKF------DNEDLEKLVYLHAALSESMRLYPPLPFN--HKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGED  413 (500)
T ss_pred             HHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcC--ceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCC
Confidence            99763      6899999999999999999999999988  677776655 49999999999999999999999999 89


Q ss_pred             CCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCcccccccccc
Q 009414          442 PLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCE  521 (535)
Q Consensus       442 p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  521 (535)
                      |++|+||||++++...    ....+..|+|||+|+|+|+|++||++|+++++|.|+++|++++.++.+.  ....+.+.+
T Consensus       414 P~~F~PeRfl~~~~~~----~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~~~~~l~  487 (500)
T PLN02169        414 ALDFKPERWISDNGGL----RHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--EAIPSILLR  487 (500)
T ss_pred             hhhcCccccCCCCCCc----cCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccccceEEe
Confidence            9999999999654211    0113578999999999999999999999999999999999999865433  334567888


Q ss_pred             ccCceeEEEEec
Q 009414          522 MKNPLTVRVHAR  533 (535)
Q Consensus       522 ~~~~~~v~~~~r  533 (535)
                      |+++++|++++|
T Consensus       488 ~~~gl~l~l~~~  499 (500)
T PLN02169        488 MKHGLKVTVTKK  499 (500)
T ss_pred             cCCCEEEEEEeC
Confidence            999999999987


No 20 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=6e-72  Score=557.82  Aligned_cols=424  Identities=21%  Similarity=0.311  Sum_probs=341.0

Q ss_pred             CCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhhh
Q 009414           68 KPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYSL  145 (535)
Q Consensus        68 ~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~~  145 (535)
                      +.||||+++|++||++.+..++..++.+++++|  |++|++++|+.++++++||+.+++++.+  ..|..+.. ..... 
T Consensus        31 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~-~~~~~-  106 (463)
T PLN02774         31 GLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRY--GSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYP-QSMLD-  106 (463)
T ss_pred             CCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHh--ccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCC-HHHHH-
Confidence            458999999999999888767788999999999  8999999999999999999999999974  33333322 22222 


Q ss_pred             hcc-cceeeCcCChhHHHHHHHhhhccCCHhhhhh-chhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHhc
Q 009414          146 MFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINS-AEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFG  223 (535)
Q Consensus       146 ~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~-~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG  223 (535)
                      .+| .+++. .+|+.|+++|+.+ .+.|++..++. +.+.+.+.++++++.|..  ++++|+.+.+..+++++++.++||
T Consensus       107 ~lg~~~~~~-~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~g  182 (463)
T PLN02774        107 ILGTCNIAA-VHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWDG--LKTIDIQEKTKEMALLSALKQIAG  182 (463)
T ss_pred             HhCccchhh-cCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhCC--CCCEEeeHHHHHHHHHHHHHHHcC
Confidence            344 35544 4899999999999 67899999986 789999999999888853  457999999999999999999999


Q ss_pred             ccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCC
Q 009414          224 RKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRN  303 (535)
Q Consensus       224 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  303 (535)
                      .+.+.       ...++...+.....  ...    .+|.  ++ +....++..++.+.+.+++.+.|++++++..  .. 
T Consensus       183 ~~~~~-------~~~~~~~~~~~~~~--~~~----~~~~--~l-p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--~~-  243 (463)
T PLN02774        183 TLSKP-------ISEEFKTEFFKLVL--GTL----SLPI--DL-PGTNYRSGVQARKNIVRMLRQLIQERRASGE--TH-  243 (463)
T ss_pred             CCChH-------HHHHHHHHHHHHhc--ccc----cCCc--CC-CChhhhHHHHHHHHHHHHHHHHHHHHHhcCC--Cc-
Confidence            76432       22223322222211  111    1121  12 1222345567788899999999988875432  23 


Q ss_pred             CcHHHHHhccCCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcC---CCCCChhhc
Q 009414          304 SDFVDVLLSLSGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGR---SRPLTESDL  379 (535)
Q Consensus       304 ~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~---~~~~~~~~l  379 (535)
                      .|+++.+++...+ ..++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++++++.   ...++++++
T Consensus       244 ~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l  323 (463)
T PLN02774        244 TDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDY  323 (463)
T ss_pred             ccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHH
Confidence            4999999875433 258999999999999999999999999999999999999999999999999863   356899999


Q ss_pred             cCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCcc
Q 009414          380 QSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMD  459 (535)
Q Consensus       380 ~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~  459 (535)
                      ++||||+|||+|+||++|+++..  .|.+.+|++++||.||||+.|+++++.+|+||++|+||++|+||||++++..   
T Consensus       324 ~~lpyl~a~ikE~lRl~P~v~~~--~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~---  398 (463)
T PLN02774        324 KSMRFTRAVIFETSRLATIVNGV--LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE---  398 (463)
T ss_pred             hcCcHHHHHHHHHHhcCCCCCCc--ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC---
Confidence            99999999999999999999977  7999999999999999999999999999999999999999999999964311   


Q ss_pred             ccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEe
Q 009414          460 ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHA  532 (535)
Q Consensus       460 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  532 (535)
                           ....|+|||+|+|+|||++||++|++++++.|+++|+|++.++++..  ...  +..|+++++|++++
T Consensus       399 -----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~--~~~--~~~p~~g~~~~~~~  462 (463)
T PLN02774        399 -----SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLM--KFP--RVEAPNGLHIRVSP  462 (463)
T ss_pred             -----CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccc--cCC--CCCCCCCceEEeee
Confidence                 12359999999999999999999999999999999999998764321  111  33477999999875


No 21 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=6.6e-72  Score=565.80  Aligned_cols=450  Identities=20%  Similarity=0.307  Sum_probs=344.7

Q ss_pred             CCCCCCCCccccccccCCChhHHHHHHHHHhc-CcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhhhh
Q 009414           70 IPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYK-AKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYSLM  146 (535)
Q Consensus        70 ~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~-~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~~~  146 (535)
                      +|||+++|++||++.+..+ +..+.++.++|. +|++|++++|++++++++||+.+++|+.+  ..|.+++.+......+
T Consensus        32 ~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~  110 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVL  110 (516)
T ss_pred             cCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHH
Confidence            8999999999998765433 344566666663 26899999999999999999999999974  4566654433333344


Q ss_pred             cccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHH-HHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHHHHHHHhc
Q 009414          147 FNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQR-SDIASQMVSMIASY--GGSAFRLRDILKPASLNNMMCSVFG  223 (535)
Q Consensus       147 ~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~-~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~vi~~~~fG  223 (535)
                      +|.+++. .+|+.|+++||.+ ++.|+.++++.+.+.+ .+.++.+++.+.+.  +++++|+.++++.+++|+++.++||
T Consensus       111 ~g~~l~~-~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG  188 (516)
T PLN03195        111 LGDGIFN-VDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGFG  188 (516)
T ss_pred             hcCeeec-cCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHhC
Confidence            5777654 5899999999999 6889999999999876 66777888777643  4567999999999999999999999


Q ss_pred             ccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcC----
Q 009414          224 RKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTS----  299 (535)
Q Consensus       224 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----  299 (535)
                      .+++.+.....  ...+.+.++....... ......++.+..+......+...+..+.+.+++.+.+++++++...    
T Consensus       189 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (516)
T PLN03195        189 VEIGTLSPSLP--ENPFAQAFDTANIIVT-LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKS  265 (516)
T ss_pred             CCccccccCCC--ccHHHHHHHHHHHHHH-HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            99876432111  1123333332221110 0001111111111011122344556778888899999887765321    


Q ss_pred             -CCCCCcHHHHHhccCCC--CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcC------
Q 009414          300 -LQRNSDFVDVLLSLSGP--DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGR------  370 (535)
Q Consensus       300 -~~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~------  370 (535)
                       +....|+++.+++..++  ++++++++.+++..+++||+|||+++++|++|+|++||++|++||+|+++++++      
T Consensus       266 ~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~  345 (516)
T PLN03195        266 GKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEED  345 (516)
T ss_pred             cccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccccc
Confidence             11234899999976432  359999999999999999999999999999999999999999999999988642      


Q ss_pred             --------------CCCCChhhccCCCchhHHHHhhhcCCCCCCccccccccccccee-cCeeeCCCCEEEEehhhhhcC
Q 009414          371 --------------SRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTV-DHYHVPAGTTAMVNIWAIMRD  435 (535)
Q Consensus       371 --------------~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d  435 (535)
                                    ++.++++++++||||+|||+||||++|++|..  .|.+.+|..+ +|+.||||+.|.+++|++|+|
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~--~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~d  423 (516)
T PLN03195        346 PEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD--PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRM  423 (516)
T ss_pred             ccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch--hhhhccCcCcCCCcEECCCCEEEEehHhhccC
Confidence                          24589999999999999999999999999988  6777777665 999999999999999999999


Q ss_pred             CCCC-CCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccc
Q 009414          436 PEIY-ADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSE  514 (535)
Q Consensus       436 ~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~  514 (535)
                      |++| +||++|+||||++++...     ...+..|+|||+|+|+|+|++||++|+++++|.++++|++++.++.+.  ..
T Consensus       424 p~~~g~dP~~F~PeRwl~~~~~~-----~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~  496 (516)
T PLN03195        424 EYNWGPDAASFKPERWIKDGVFQ-----NASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPV--KY  496 (516)
T ss_pred             hhhhccChhhcCCcccCCCCCcC-----CCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcc--ee
Confidence            9999 999999999999643111     113467999999999999999999999999999999999998775433  23


Q ss_pred             cccccccccCceeEEEEecc
Q 009414          515 VLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       515 ~~~~~~~~~~~~~v~~~~r~  534 (535)
                      ....+..|++++.|++++|.
T Consensus       497 ~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        497 RMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             eeeeEEecCCCEEEEEEeCC
Confidence            33456778899999999884


No 22 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.9e-71  Score=553.72  Aligned_cols=425  Identities=22%  Similarity=0.352  Sum_probs=345.0

Q ss_pred             CCCCCCCCCCCCcccccccc-CCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCchhhhhh
Q 009414           66 CSKPIPGPRGLPFIGSMSLM-TNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKESAYS  144 (535)
Q Consensus        66 ~~~~~PgP~~~P~iG~~~~~-~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~  144 (535)
                      ..+.||||+++|++||++.+ .++++.++.+++++|  |++|++++|+.++|+++||+++++++.+.....++.......
T Consensus        33 ~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~~  110 (463)
T PLN02196         33 KLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRY--GSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKE  110 (463)
T ss_pred             CCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHh--hhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCchHHH
Confidence            35678999999999998775 468999999999999  899999999999999999999999997422122333333333


Q ss_pred             hhccc-ceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHhc
Q 009414          145 LMFNR-AIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFG  223 (535)
Q Consensus       145 ~~~g~-~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG  223 (535)
                      ...|. ++++ .+|+.|+++|+++ .+.|++++++.+.+.+++.++++++.|.   ++.+|+.++++.+++++++.++||
T Consensus       111 ~~~g~~~l~~-~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~~~~~~~~~v~~~~~fG  185 (463)
T PLN02196        111 RMLGKQAIFF-HQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQEMKTYTFNVALLSIFG  185 (463)
T ss_pred             HHcCcccccc-cCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHHHHHHHHHHHHHHHHcC
Confidence            44564 5544 4899999999999 5789999999999999999999998883   457999999999999999999999


Q ss_pred             ccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCC
Q 009414          224 RKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRN  303 (535)
Q Consensus       224 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  303 (535)
                      .+...       ....+.+.+.....   .   ...+|+.  + +....++..++.+.+.+++.+.+++++++..  +..
T Consensus       186 ~~~~~-------~~~~~~~~~~~~~~---~---~~~~~~~--~-p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~--~~~  247 (463)
T PLN02196        186 KDEVL-------YREDLKRCYYILEK---G---YNSMPIN--L-PGTLFHKSMKARKELAQILAKILSKRRQNGS--SHN  247 (463)
T ss_pred             CCCch-------HHHHHHHHHHHHhc---c---hhccccc--C-CCccchHHHHHHHHHHHHHHHHHHHHhhcCC--Ccc
Confidence            87432       11122222111111   0   1112321  1 1122345667778888999999988765432  233


Q ss_pred             CcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcC---CCCCChhhcc
Q 009414          304 SDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGR---SRPLTESDLQ  380 (535)
Q Consensus       304 ~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~---~~~~~~~~l~  380 (535)
                       |+++.+++.  ..+++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++.+.   ++.+++++++
T Consensus       248 -d~l~~ll~~--~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~  324 (463)
T PLN02196        248 -DLLGSFMGD--KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTK  324 (463)
T ss_pred             -cHHHHHHhc--CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHh
Confidence             899998863  3468999999999999999999999999999999999999999999999998863   4568999999


Q ss_pred             CCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccc
Q 009414          381 SMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDI  460 (535)
Q Consensus       381 ~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~  460 (535)
                      ++|||+|||+||||++|+++..  .|.+.+|++++||.||||+.|+++++++|+||++|+||++|+||||++..      
T Consensus       325 ~l~yl~avi~EtlRl~p~~~~~--~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~------  396 (463)
T PLN02196        325 KMPLTSRVIQETLRVASILSFT--FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP------  396 (463)
T ss_pred             cChHHHHHHHHHHhcCCCcccc--ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC------
Confidence            9999999999999999999987  79999999999999999999999999999999999999999999999632      


Q ss_pred             cccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEec
Q 009414          461 SLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR  533 (535)
Q Consensus       461 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  533 (535)
                          .+..++|||.|+|.|+|+++|++|++++++.|+++|+|++.+++ .+  ..+..+..|+++++|+++.+
T Consensus       397 ----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~--~~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        397 ----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NG--IQYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             ----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-Cc--eEEcccccCCCCceEEEecC
Confidence                34679999999999999999999999999999999999987642 22  23444566999999998864


No 23 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.2e-72  Score=569.75  Aligned_cols=445  Identities=29%  Similarity=0.518  Sum_probs=369.2

Q ss_pred             CCCCCCCCccccccccC--CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCC--CCCCCCchhhhh--
Q 009414           70 IPGPRGLPFIGSMSLMT--NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSS--VFADRPVKESAY--  143 (535)
Q Consensus        70 ~PgP~~~P~iG~~~~~~--~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~--~~~~~~~~~~~~--  143 (535)
                      ||||+++|++||++.+.  ++++.++.+++++|  |++|++++|++++++|+||+.+++|+.+.  .+..++......  
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~ky--G~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~   78 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKY--GPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIF   78 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHH--TSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHh--CCEEEEeEecccccccccchhhccccccccccccccccccccccc
Confidence            79999999999999987  68899999999999  99999999999999999999999999853  444443333332  


Q ss_pred             -hhhcccceeeCcCChhHHHHHHHhhhccCCHh-hhhhchhHHHHHHHHHHHHHHhhCCC--ceeHHHHHHHHHHHHHHH
Q 009414          144 -SLMFNRAIGFAPYGVYWRTLRRIAATHLFCPK-QINSAEPQRSDIASQMVSMIASYGGS--AFRLRDILKPASLNNMMC  219 (535)
Q Consensus       144 -~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~-~l~~~~~~~~~~~~~lv~~l~~~~~~--~vdl~~~~~~~~~~vi~~  219 (535)
                       ....+.++++. +|+.|+.+|+.+ .+.|+.. .+ .+.+.+++.++.+++.|.+..+.  .+|+.++++.+++|+++.
T Consensus        79 ~~~~~~~~l~~~-~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~  155 (463)
T PF00067_consen   79 RGPFGGKGLFFS-DGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGR  155 (463)
T ss_dssp             HHHHTTTSSTTS-SHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHH
T ss_pred             cccccccccccc-cccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccc
Confidence             24556777655 789999999999 5778887 66 99999999999999999887433  599999999999999999


Q ss_pred             HHhcccccccCCCCchHHHHHHHHHHHHHHhccc--cccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhh
Q 009414          220 SVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGK--LNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQ  297 (535)
Q Consensus       220 ~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  297 (535)
                      ++||.++++   .+++....+.+.+......+..  ..+...+|++.++ +....+...++.+.+.+++.+.+++++++.
T Consensus       156 ~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  231 (463)
T PF00067_consen  156 VLFGKDFGS---LDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREEL  231 (463)
T ss_dssp             HHHSSHHHG---TTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             ccccceeee---ccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence            999999886   2333455666666666554322  1234456766666 456677788888999999999999999887


Q ss_pred             cCC-CCCCcHHHHHhccC--CC--CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCC
Q 009414          298 TSL-QRNSDFVDVLLSLS--GP--DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSR  372 (535)
Q Consensus       298 ~~~-~~~~d~l~~ll~~~--~~--~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  372 (535)
                      ..+ ....|+++.+++..  .+  .+++++++.+++..+++||+|||+.+++|++++|++||++|+++|+||+++.+++.
T Consensus       232 ~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  311 (463)
T PF00067_consen  232 DDGDESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGR  311 (463)
T ss_dssp             HSSSSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            654 23449999999975  22  26999999999999999999999999999999999999999999999999997777


Q ss_pred             CCChhhccCCCchhHHHHhhhcCCCCCC-cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccC
Q 009414          373 PLTESDLQSMVYLPAVVKEVVRLHPPGP-LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFV  451 (535)
Q Consensus       373 ~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  451 (535)
                      .++.+++++||||+|||+||||++|+++ .+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||+
T Consensus       312 ~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~--~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~  389 (463)
T PF00067_consen  312 EITFEDLSKLPYLDAVIKETLRLYPPVPFSL--PRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFL  389 (463)
T ss_dssp             SHHHHHHGTGHHHHHHHHHHHHHSTSSSTEE--EEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGB
T ss_pred             ccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            8999999999999999999999999999 45  89999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEE
Q 009414          452 NPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRV  530 (535)
Q Consensus       452 ~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  530 (535)
                      +.+..     .......|+|||.|+|+|||++||++|+++++|.+|++|++++.++.+............|+.++.|++
T Consensus       390 ~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  390 DERGI-----SNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             TTTST-----BCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred             ccccc-----cccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence            87631     123567899999999999999999999999999999999999987654433333323344557777764


No 24 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.1e-70  Score=558.42  Aligned_cols=439  Identities=19%  Similarity=0.335  Sum_probs=340.4

Q ss_pred             ccccccC-CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhhhhcccceeeCcC
Q 009414           80 GSMSLMT-NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYSLMFNRAIGFAPY  156 (535)
Q Consensus        80 G~~~~~~-~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~  156 (535)
                      ||+..+. +..+..+.+++++|  |+||++++|+.++++|+||+.+++||.+  ..|.+++.. .......|.++++ .+
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kY--GpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~-~~~~~~~g~~l~~-~d  218 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTY--GGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILA-EILEFVMGKGLIP-AD  218 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHh--CCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchH-HHHhhccCCceec-CC
Confidence            4444444 56789999999999  9999999999999999999999999984  456665432 2222344667655 48


Q ss_pred             ChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHHHHHHHhcccccccCCCCc
Q 009414          157 GVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSN  234 (535)
Q Consensus       157 g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~l~~~~~  234 (535)
                      |+.|+.+|+.+ .+.|+...++.+++.+.+.++.+++++.+.  .++.+|+.+.+..+++|+|+.++||.+++.+...+ 
T Consensus       219 ge~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~-  296 (633)
T PLN02738        219 GEIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDT-  296 (633)
T ss_pred             cHHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccch-
Confidence            99999999999 689999999999999999999999999764  46789999999999999999999999987632111 


Q ss_pred             hHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhc----------CCCCCC
Q 009414          235 TEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQT----------SLQRNS  304 (535)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~  304 (535)
                      +....+...+...............+|.+..++  ...++..+..+.+.+++.++++.+++..+          .+....
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~--~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~  374 (633)
T PLN02738        297 GIVEAVYTVLREAEDRSVSPIPVWEIPIWKDIS--PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDP  374 (633)
T ss_pred             HHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccc
Confidence            122223333322221111110001122222221  12234444555666666666654433110          011223


Q ss_pred             cHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCc
Q 009414          305 DFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVY  384 (535)
Q Consensus       305 d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~  384 (535)
                      |+++.|++..  +.++++++.++++.+++||+|||+++++|++|+|++||++|+|||+|++++++ +..++++++++|||
T Consensus       375 dil~~Ll~~~--~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~kLPY  451 (633)
T PLN02738        375 SILHFLLASG--DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKKLKY  451 (633)
T ss_pred             hHHHHHHHcC--CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHccCHH
Confidence            8999998754  35899999999999999999999999999999999999999999999999988 46789999999999


Q ss_pred             hhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccC
Q 009414          385 LPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMG  464 (535)
Q Consensus       385 l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~  464 (535)
                      |+|||+|+||++|+++.+  .|.+.+|.+++||.|||||.|.++.|.+|+||++|+||++|+||||+..+...   ....
T Consensus       452 L~AVIkEtLRL~p~~p~~--~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~---~~~~  526 (633)
T PLN02738        452 TTRVINESLRLYPQPPVL--IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNP---NETN  526 (633)
T ss_pred             HHHHHHHHHhcCCCcccc--ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCc---cccC
Confidence            999999999999999987  78899999999999999999999999999999999999999999998532110   0111


Q ss_pred             CCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEeccC
Q 009414          465 SDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR  535 (535)
Q Consensus       465 ~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  535 (535)
                      ....|+|||.|+|+|+|++||++|+++++|.|+++|+|++.++.+ ++....+++..|+++++|++++|.+
T Consensus       527 ~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        527 QNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             CCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCC
Confidence            456799999999999999999999999999999999999987642 2333446777888999999999863


No 25 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=5.9e-70  Score=550.65  Aligned_cols=433  Identities=21%  Similarity=0.320  Sum_probs=345.2

Q ss_pred             CCCCCCCCCCCCCccccccccC-----CChhHHHHHHHHHhcCcc--eEEEEeCCeeEEEecCHHHHHHHhcC-CCCCCC
Q 009414           65 ACSKPIPGPRGLPFIGSMSLMT-----NLPHHNLAAAAEAYKAKR--VMAFSLGETRVIITCSPDVAKEILNS-SVFADR  136 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~~-----~~~~~~l~~~~~ky~~G~--v~~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~  136 (535)
                      +..+.||||+++|++|+++.+.     .+++.++.+++++|  |+  +|++++|+.++++++||+.+++|+.+ ..|.++
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~ky--G~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~~f~~~  116 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRY--GRTGIYKAFMFGQPTVLVTTPEACKRVLTDDDAFEPG  116 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHh--CCCcceeeecCCCCeEEEcCHHHHHHHHcCCCccccC
Confidence            4566799999999999998762     46888999999999  65  79999999999999999999999985 345544


Q ss_pred             CchhhhhhhhcccceeeCcCChhHHHHHHHhhhccC-CHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHH
Q 009414          137 PVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLF-CPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLN  215 (535)
Q Consensus       137 ~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~f-s~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~  215 (535)
                      ..... .. .+|.+.+...+|+.|+++|+.+ .+.| +++.++.+.+.+.+.++++++.+..  ++.+|+.+.++.++++
T Consensus       117 ~~~~~-~~-~~g~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~~~  191 (490)
T PLN02302        117 WPEST-VE-LIGRKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLTFK  191 (490)
T ss_pred             CchhH-HH-HhccccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHHHH
Confidence            32221 12 3454433445899999999999 4667 5789999999999999999999854  3469999999999999


Q ss_pred             HHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 009414          216 NMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRT  295 (535)
Q Consensus       216 vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  295 (535)
                      +++.++||.+++.       ....+...+..........  ...+|.       ...++..++.+.+.+++.+.++++++
T Consensus       192 vi~~~~~G~~~~~-------~~~~~~~~~~~~~~~~~~~--~~~~p~-------~~~~~~~~~~~~l~~~~~~~i~~~~~  255 (490)
T PLN02302        192 IIMYIFLSSESEL-------VMEALEREYTTLNYGVRAM--AINLPG-------FAYHRALKARKKLVALFQSIVDERRN  255 (490)
T ss_pred             HHHHHHcCCCChH-------HHHHHHHHHHHHHHHhhhC--CcCCCc-------hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987543       2222222222221111110  011121       12234445667888899999988876


Q ss_pred             hhcCC--CCCCcHHHHHhccCCC--CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCC
Q 009414          296 TQTSL--QRNSDFVDVLLSLSGP--DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRS  371 (535)
Q Consensus       296 ~~~~~--~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~  371 (535)
                      ....+  ....|+++.+++..++  ..++++++.+++..+++||+|||+++++|++++|++||++|+++|+|+++++++.
T Consensus       256 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~  335 (490)
T PLN02302        256 SRKQNISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKR  335 (490)
T ss_pred             hhhccCCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Confidence            53321  1234999999986533  2589999999999999999999999999999999999999999999999998642


Q ss_pred             ----CCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCC
Q 009414          372 ----RPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMP  447 (535)
Q Consensus       372 ----~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  447 (535)
                          ..++++++++||||+|||+|+||++|+++..  .|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|
T Consensus       336 ~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~P  413 (490)
T PLN02302        336 PPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV--FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDP  413 (490)
T ss_pred             CCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc--hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccCh
Confidence                2378999999999999999999999999987  7999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCcee
Q 009414          448 ERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLT  527 (535)
Q Consensus       448 ~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (535)
                      |||++..         ..+..++|||.|+|+|+|++||.+|++++++.++++|++++.+++ .++.  ......|.++++
T Consensus       414 eR~~~~~---------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~  481 (490)
T PLN02302        414 SRWDNYT---------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVM--YLPHPRPKDNCL  481 (490)
T ss_pred             hhcCCCC---------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Ccce--eCCCCCCCCCce
Confidence            9998643         134679999999999999999999999999999999999997642 2222  222377889999


Q ss_pred             EEEEecc
Q 009414          528 VRVHARR  534 (535)
Q Consensus       528 v~~~~r~  534 (535)
                      +++++|+
T Consensus       482 ~~~~~~~  488 (490)
T PLN02302        482 ARITKVA  488 (490)
T ss_pred             EEEEecc
Confidence            9999885


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=2e-70  Score=545.69  Aligned_cols=431  Identities=21%  Similarity=0.300  Sum_probs=343.4

Q ss_pred             CCCCCCCCCCCCCccccccccC-----CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCC
Q 009414           65 ACSKPIPGPRGLPFIGSMSLMT-----NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRP  137 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~~-----~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~  137 (535)
                      ++.+.||||.++|++||++.+.     .+++.++.++.++|  |+||++++|+.++++++||+.+++++.+  ..|..+.
T Consensus         4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~y--G~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLY--GKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHh--hheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            3456689999999999998873     46889999999999  8999999999999999999999999984  3344332


Q ss_pred             chhhhhhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhh-chhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHH
Q 009414          138 VKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINS-AEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNN  216 (535)
Q Consensus       138 ~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~-~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~v  216 (535)
                        ......++|.+.++..+|+.|+++|+++ .+.|+...+.. ..+.+.+.++++++.+.  .++.+|+.+.+..+++++
T Consensus        82 --~~~~~~l~g~~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v  156 (452)
T PLN03141         82 --PKSLTELMGKSSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR--DDPPVLVQDETKKIAFEV  156 (452)
T ss_pred             --chhHHHHhCcccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc--CCCCEEhHHHHHHHHHHH
Confidence              1222234554323444899999999999 57788777765 35666777777776663  356799999999999999


Q ss_pred             HHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009414          217 MMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTT  296 (535)
Q Consensus       217 i~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  296 (535)
                      ++.++||.+.+.       +..++...+.........      +|+.  ++ ....++..++.+.+.+++.+.|+++++.
T Consensus       157 i~~~~~G~~~~~-------~~~~~~~~~~~~~~~~~~------~~~~--~p-~~~~~~~~~~~~~l~~~~~~~i~~~~~~  220 (452)
T PLN03141        157 LVKALISLEPGE-------EMEFLKKEFQEFIKGLMS------LPIK--LP-GTRLYRSLQAKKRMVKLVKKIIEEKRRA  220 (452)
T ss_pred             HHHHHcCCCchH-------HHHHHHHHHHHHhhhHHh------CccC--CC-chHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999976433       233333333333322111      2211  11 1122344567889999999999988765


Q ss_pred             hcCCC-----CCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhc--
Q 009414          297 QTSLQ-----RNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVG--  369 (535)
Q Consensus       297 ~~~~~-----~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~--  369 (535)
                      .+.+.     ...|+++.+++.. +..++++++..+++.+++||+|||+.+++|++++|++||++|+++++|++++.+  
T Consensus       221 ~~~~~~~~~~~~~d~l~~ll~~~-~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~  299 (452)
T PLN03141        221 MKNKEEDETGIPKDVVDVLLRDG-SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLK  299 (452)
T ss_pred             HhccCccccCChhhHHHHHHhcC-CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhcc
Confidence            43211     1238999999864 346899999999999999999999999999999999999999999999998763  


Q ss_pred             --CCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCC
Q 009414          370 --RSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMP  447 (535)
Q Consensus       370 --~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  447 (535)
                        .+..++++++.+||||+|||+|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|
T Consensus       300 ~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~--~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~P  377 (452)
T PLN03141        300 ADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV--MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNP  377 (452)
T ss_pred             CCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc--ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCc
Confidence              245689999999999999999999999999876  8999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCcee
Q 009414          448 ERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLT  527 (535)
Q Consensus       448 ~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (535)
                      |||++++         ..+..|+|||+|+|+|+|++||++|+++++|.|+++|++++.++...     ...+..|..++.
T Consensus       378 eRfl~~~---------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~-----~~~~~~~~~~~~  443 (452)
T PLN03141        378 WRWQEKD---------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV-----NFPTVRMKRKLP  443 (452)
T ss_pred             ccccCCC---------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee-----ecccccCCCCce
Confidence            9999643         12467999999999999999999999999999999999998765321     124778889999


Q ss_pred             EEEEeccC
Q 009414          528 VRVHARRR  535 (535)
Q Consensus       528 v~~~~r~~  535 (535)
                      |++++|++
T Consensus       444 ~~~~~~~~  451 (452)
T PLN03141        444 IWVTRIDD  451 (452)
T ss_pred             EEEEeCCC
Confidence            99999964


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=3.3e-69  Score=535.28  Aligned_cols=431  Identities=19%  Similarity=0.274  Sum_probs=339.2

Q ss_pred             CCCCCCCCCCCCCccccccccC-----CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCC
Q 009414           65 ACSKPIPGPRGLPFIGSMSLMT-----NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRP  137 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~~-----~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~  137 (535)
                      .+.+.||||.++|++||++.+.     .++..++.+++++|  |++|++++|++++++|+||+.+++++.+  ..|.++.
T Consensus        27 ~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~y--G~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~  104 (472)
T PLN02987         27 RRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARY--GSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSY  104 (472)
T ss_pred             CCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHh--chhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecC
Confidence            3456789999999999998863     45888999999999  9999999999999999999999999985  4454443


Q ss_pred             chhhhhhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchh-HHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHH
Q 009414          138 VKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEP-QRSDIASQMVSMIASYGGSAFRLRDILKPASLNN  216 (535)
Q Consensus       138 ~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~-~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~v  216 (535)
                      . ......+.+.++++. +|+.|+++|+++ .+.++.+.++.+.. .+.+.++..++.|    .+++++.+.++++++++
T Consensus       105 ~-~~~~~~lg~~~l~~~-~g~~wr~~R~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~t~~v  177 (472)
T PLN02987        105 P-GSISNLLGKHSLLLM-KGNLHKKMHSLT-MSFANSSIIKDHLLLDIDRLIRFNLDSW----SSRVLLMEEAKKITFEL  177 (472)
T ss_pred             c-HHHHHHhCccccccc-CcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHhh----ccceehHHHHHHHHHHH
Confidence            2 222222333567666 899999999998 45445555555432 1333344444444    24699999999999999


Q ss_pred             HHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009414          217 MMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTT  296 (535)
Q Consensus       217 i~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  296 (535)
                      +++++||.+.+.       ..+.+.+.+.......    ....+|++     ....++..++.+++.+++.+.++++++.
T Consensus       178 i~~~~fg~~~~~-------~~~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~  241 (472)
T PLN02987        178 TVKQLMSFDPGE-------WTESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEALTLVVMKRRKE  241 (472)
T ss_pred             HHHHHcCCCChH-------HHHHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999976533       1122222222221111    11234543     2234567778899999999999998775


Q ss_pred             hcCC-CCCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhc---CCC
Q 009414          297 QTSL-QRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVG---RSR  372 (535)
Q Consensus       297 ~~~~-~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~---~~~  372 (535)
                      .+.+ +...|+++.+++..+  +++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++.+   +..
T Consensus       242 ~~~~~~~~~d~l~~ll~~~~--~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~  319 (472)
T PLN02987        242 EEEGAEKKKDMLAALLASDD--GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSY  319 (472)
T ss_pred             hhccCcccccHHHHHHhcCC--CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCC
Confidence            4322 223499999998643  6899999999999999999999999999999999999999999999999875   245


Q ss_pred             CCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCC
Q 009414          373 PLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVN  452 (535)
Q Consensus       373 ~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  452 (535)
                      .++++++.+|||++||++|+||++|+++..  .|.+.+|++++||.||||+.|.++.+.+|+||++|+||++|+||||++
T Consensus       320 ~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~--~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~  397 (472)
T PLN02987        320 SLEWSDYKSMPFTQCVVNETLRVANIIGGI--FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQS  397 (472)
T ss_pred             CCCHHHHhcChHHHHHHHHHHHccCCcCCc--cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCC
Confidence            688999999999999999999999999876  799999999999999999999999999999999999999999999987


Q ss_pred             CCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEe
Q 009414          453 PEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHA  532 (535)
Q Consensus       453 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  532 (535)
                      ++..      ......++|||.|+|.|||++||+.|++++++.|+++|++++.++++..  .  ..+.+|.+++.+++++
T Consensus       398 ~~~~------~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~--~--~~~~~p~~~~~~~~~~  467 (472)
T PLN02987        398 NSGT------TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLV--F--FPTTRTQKRYPINVKR  467 (472)
T ss_pred             CCCC------CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCcee--e--cccccCCCCceEEEEe
Confidence            5311      1134579999999999999999999999999999999999998764322  2  3488899999999999


Q ss_pred             cc
Q 009414          533 RR  534 (535)
Q Consensus       533 r~  534 (535)
                      |.
T Consensus       468 r~  469 (472)
T PLN02987        468 RD  469 (472)
T ss_pred             cc
Confidence            85


No 28 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-69  Score=493.24  Aligned_cols=445  Identities=20%  Similarity=0.340  Sum_probs=369.7

Q ss_pred             CCCCCCCC-CCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhh
Q 009414           68 KPIPGPRG-LPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYS  144 (535)
Q Consensus        68 ~~~PgP~~-~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~  144 (535)
                      ..||.-++ +|++|++..++++|.+++++.++||  |+||++.++|+.+.++.||+....++++  .+++....+.....
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~--GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~  108 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKY--GDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTT  108 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhc--CCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhh
Confidence            56888765 9999999999999999999999999  9999999999999999999999999986  46666666667778


Q ss_pred             hhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHH-HHhhCCCceeHHHHHHHHHHHHHHHHHhc
Q 009414          145 LMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSM-IASYGGSAFRLRDILKPASLNNMMCSVFG  223 (535)
Q Consensus       145 ~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~-l~~~~~~~vdl~~~~~~~~~~vi~~~~fG  223 (535)
                      ..||+|+....++....++.+++ ...+...+++++.+.|.+++.+.++. +.+ ++.+-.+.+++..+++.+.-.+.||
T Consensus       109 ~vFg~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~-s~~~d~l~~~~~~ii~tAs~~ll~~  186 (486)
T KOG0684|consen  109 PVFGKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE-SGETDGLYTFCRLIIFTASRLLLGG  186 (486)
T ss_pred             hhcCCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc-ccchhHhhhhhHHHhhhhHHHhhhh
Confidence            89999999888888999999999 67899999999999999999998887 544 4555667778888888777777777


Q ss_pred             ccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCC
Q 009414          224 RKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRN  303 (535)
Q Consensus       224 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  303 (535)
                      +....+    +.....+...+++.+..     +...||.  ++ |....++..++++.+.+.+...+.++++..+. ...
T Consensus       187 e~r~~~----d~~~a~l~~dLd~~F~~-----~d~~FP~--~L-P~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~-~~~  253 (486)
T KOG0684|consen  187 EVRDQL----DADVAKLYHDLDQGFQP-----FDFLFPY--NL-PIPLLRRRDRARKKISKIFSKIILDRRASISK-WDN  253 (486)
T ss_pred             hhhhhh----cchHHHHHHHHhccccc-----hHhhccc--CC-CcchhhhHHHHHHHHHHHHHHHHHHHHhcccc-ccH
Confidence            765542    22334444444444332     2233553  33 34455666689999999999999999987753 333


Q ss_pred             CcHHHHHhccCC-CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCC-CChhhccC
Q 009414          304 SDFVDVLLSLSG-PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRP-LTESDLQS  381 (535)
Q Consensus       304 ~d~l~~ll~~~~-~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~-~~~~~l~~  381 (535)
                       |+++.+++..+ .-+.+++|+++..+.++|||+.||++|.+|++++|++|||+++++++|++.++|.... ++++.+++
T Consensus       254 -dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~  332 (486)
T KOG0684|consen  254 -DMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKD  332 (486)
T ss_pred             -HHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhc
Confidence             89999998333 3368999999999999999999999999999999999999999999999999987654 99999999


Q ss_pred             CCchhHHHHhhhcCCCCCCcccccccccccceecC----eeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCC
Q 009414          382 MVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDH----YHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAAD  457 (535)
Q Consensus       382 lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~  457 (535)
                      ||.|++||+|||||+||.+.+  -|.+.+|.++.+    |.||+|..|.+++..+|+||++|+||+.|+|+||++++.++
T Consensus       333 lplL~~~IkEtLRL~~p~~~~--~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~  410 (486)
T KOG0684|consen  333 LPLLDSCIKETLRLHPPAHSL--MRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGES  410 (486)
T ss_pred             chHHHHHHHHHHhcCCchhhH--HHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCccc
Confidence            999999999999999999987  699999999955    99999999999999999999999999999999999876444


Q ss_pred             ccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          458 MDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       458 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      .+.. ..-++.|||||+|.|.|||+.||.+|++.++..+|+.||+++.+|..++++ ...++..|++++.++.+.|+
T Consensus       411 ~k~g-~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d-~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  411 KKNG-EKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVD-YSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             cccc-ccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCC-HHHhhcCCCCCceEEEeecC
Confidence            2111 113456799999999999999999999999999999999999997333333 33448899999999999886


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=2.6e-68  Score=533.07  Aligned_cols=439  Identities=20%  Similarity=0.273  Sum_probs=344.0

Q ss_pred             CCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhhhhcccceee
Q 009414           76 LPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYSLMFNRAIGF  153 (535)
Q Consensus        76 ~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~~~~g~~~~~  153 (535)
                      .++.|++.....+.++++..+.++++ +.+++++..+.  ++++||+.+++|++.  .+|.+...+........|+|++.
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi~~  125 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSP-TGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIFN  125 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCC-CcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCceee
Confidence            55888887755566788878888884 36777776665  899999999999984  56777655444444456888755


Q ss_pred             CcCChhHHHHHHHhhhccCCHhhhhhch--hHHHHHHHHHHHHHHhh----CCCceeHHHHHHHHHHHHHHHHHhccccc
Q 009414          154 APYGVYWRTLRRIAATHLFCPKQINSAE--PQRSDIASQMVSMIASY----GGSAFRLRDILKPASLNNMMCSVFGRKYA  227 (535)
Q Consensus       154 ~~~g~~w~~~Rr~l~~~~fs~~~l~~~~--~~~~~~~~~lv~~l~~~----~~~~vdl~~~~~~~~~~vi~~~~fG~~~~  227 (535)
                      . +|+.|+++||.+ ++.|+.++++.+.  +.+++.++.+++.+.+.    .++++|+.++++++++|+++.++||.+++
T Consensus       126 ~-~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~  203 (502)
T PLN02426        126 V-DGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPG  203 (502)
T ss_pred             c-CcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCc
Confidence            4 899999999999 7899999998874  67788888888888653    23579999999999999999999999987


Q ss_pred             ccCCCCchHHHHHHHHHHHHHHhcccccccccccccc---ccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCC
Q 009414          228 LLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA---DFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNS  304 (535)
Q Consensus       228 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~---~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  304 (535)
                      .++...  ...++...++........ .....+|++.   .+.+.+..++..++.+.+.+++.+.|+++++.... . ..
T Consensus       204 ~l~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~-~-~~  278 (502)
T PLN02426        204 CLELSL--PISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFS-A-SK  278 (502)
T ss_pred             ccCCCC--CccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccC-C-cc
Confidence            753211  122333444333221111 0111123221   11112334566778889999999999988765332 2 34


Q ss_pred             cHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCC-CCCChhhccCCC
Q 009414          305 DFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRS-RPLTESDLQSMV  383 (535)
Q Consensus       305 d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~-~~~~~~~l~~lp  383 (535)
                      |+++.+++..    .+++++.+++.++++||+|||+++++|++|+|++||++|+++|+|++++++.+ ..++++++++||
T Consensus       279 dll~~ll~~~----~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~Lp  354 (502)
T PLN02426        279 DLLSRFMASI----NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMH  354 (502)
T ss_pred             hHHHHHHhcC----CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcCh
Confidence            9999999754    26889999999999999999999999999999999999999999999998753 468999999999


Q ss_pred             chhHHHHhhhcCCCCCCccccccccccccee-cCeeeCCCCEEEEehhhhhcCCCCC-CCCCCCCCCccCCCCCCCcccc
Q 009414          384 YLPAVVKEVVRLHPPGPLLSWARLAITDTTV-DHYHVPAGTTAMVNIWAIMRDPEIY-ADPLKFMPERFVNPEAADMDIS  461 (535)
Q Consensus       384 ~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~  461 (535)
                      ||+|||+|+||++|+++..  .|.+.+|.++ +|+.||||+.|.++.+++||||++| +||++|+||||++++..     
T Consensus       355 Yl~avi~EtLRl~p~v~~~--~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~-----  427 (502)
T PLN02426        355 YLHAALYESMRLFPPVQFD--SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVF-----  427 (502)
T ss_pred             HHHHHHHHHHhCCCCCCCc--ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCc-----
Confidence            9999999999999999987  7999998887 9999999999999999999999999 99999999999863210     


Q ss_pred             ccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEeccC
Q 009414          462 LMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR  535 (535)
Q Consensus       462 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  535 (535)
                      .......++|||+|+|.|+|++||++|++++++.++++|++++.++.+.......+++..|++++.|++++|.+
T Consensus       428 ~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~~  501 (502)
T PLN02426        428 VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERVR  501 (502)
T ss_pred             CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEccC
Confidence            01134679999999999999999999999999999999999986532222233446788999999999999864


No 30 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3.8e-68  Score=533.09  Aligned_cols=444  Identities=21%  Similarity=0.350  Sum_probs=353.0

Q ss_pred             CCCCCCCCcccccccc-----CCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhh
Q 009414           70 IPGPRGLPFIGSMSLM-----TNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESA  142 (535)
Q Consensus        70 ~PgP~~~P~iG~~~~~-----~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~  142 (535)
                      --|-.|||++|+.+.+     .+..+..+.+++++|  |++|++++|+.++++++||+++++|+++  ..|.+++... .
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~-~   90 (489)
T PLN02936         14 WGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEY--GPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAE-V   90 (489)
T ss_pred             CCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHc--CCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhh-h
Confidence            4567889999988776     357899999999999  8999999999999999999999999974  6777765432 2


Q ss_pred             hhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchh-HHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHHHHH
Q 009414          143 YSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEP-QRSDIASQMVSMIASY--GGSAFRLRDILKPASLNNMMC  219 (535)
Q Consensus       143 ~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~-~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~vi~~  219 (535)
                      ....+|.++++. +|+.|+++|+.+ .+.|+...+..+.+ .+.++++.+++.+.+.  +++++|+.++++++++|+++.
T Consensus        91 ~~~~~~~~i~~~-~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~  168 (489)
T PLN02936         91 SEFLFGSGFAIA-EGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGL  168 (489)
T ss_pred             hHHHhcCccccC-CchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence            233456676554 899999999999 68999988888765 7889999999999765  456899999999999999999


Q ss_pred             HHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccc-----cccchhHHHHHHHHhhHHHHHHHHHHHHHHH
Q 009414          220 SVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWL-----ADFDLQKVRLRSSKLVPQVNRFVNRIIQEHR  294 (535)
Q Consensus       220 ~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-----~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  294 (535)
                      ++||.+++.+... +    ++.+.+...+..... .....+|++     .++  .+..++..++.+.+.+++.+.+++++
T Consensus       169 ~~fG~~~~~~~~~-~----~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~--~p~~~~~~~~~~~i~~~~~~~i~~~~  240 (489)
T PLN02936        169 SVFNYNFDSLTTD-S----PVIQAVYTALKEAET-RSTDLLPYWKVDFLCKI--SPRQIKAEKAVTVIRETVEDLVDKCK  240 (489)
T ss_pred             HHcCCCccccccC-c----HHHHHHHHHHHHHHH-hhhccchHHhhHHHhcc--ChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998764221 1    122222222221111 111223322     112  12344566777888888888888776


Q ss_pred             HhhcC-----------CCCCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHH
Q 009414          295 TTQTS-----------LQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSE  363 (535)
Q Consensus       295 ~~~~~-----------~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~E  363 (535)
                      +..+.           ++.+.|+++.|++..+  +++++++.++++.+++||+|||+++++|++|+|++||++|+++|+|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~--~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~E  318 (489)
T PLN02936        241 EIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE--EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEE  318 (489)
T ss_pred             HHHhhcccccccccccccCchHHHHHHHhccc--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            53211           0123479999987543  4899999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCC
Q 009414          364 LDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPL  443 (535)
Q Consensus       364 i~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  443 (535)
                      +++++++ ..++++++++||||+|||+||||++|+++... +|.+.+|+.++||.||||+.|.++.+++|+||++|+||+
T Consensus       319 i~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~-~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~  396 (489)
T PLN02936        319 LDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLI-RRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAE  396 (489)
T ss_pred             HHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCccccc-ceeccCccccCCeEECCCCEEEecHHhccCChhhCCCcc
Confidence            9999874 45899999999999999999999999998764 666677888899999999999999999999999999999


Q ss_pred             CCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCcccccccccccc
Q 009414          444 KFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMK  523 (535)
Q Consensus       444 ~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  523 (535)
                      +|+||||+.++...   .....+..++|||.|+|+|+|++||++|++++++.|+++|++++.++++..  ...+++..|+
T Consensus       397 ~F~PeRwl~~~~~~---~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~~  471 (489)
T PLN02936        397 EFVPERFDLDGPVP---NETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIV--MTTGATIHTT  471 (489)
T ss_pred             ccCccccCCCCCCc---cccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccc--eecceEEeeC
Confidence            99999999643111   011124579999999999999999999999999999999999998765432  2345667788


Q ss_pred             CceeEEEEeccC
Q 009414          524 NPLTVRVHARRR  535 (535)
Q Consensus       524 ~~~~v~~~~r~~  535 (535)
                      +++.|++++|.+
T Consensus       472 ~~~~v~~~~R~~  483 (489)
T PLN02936        472 NGLYMTVSRRRV  483 (489)
T ss_pred             CCeEEEEEeeeC
Confidence            999999999975


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.6e-59  Score=462.05  Aligned_cols=411  Identities=16%  Similarity=0.219  Sum_probs=294.9

Q ss_pred             CCCCCCCCCCCCCCcccccccc-----CCChhHHHHHHHHHhcCcc-eEEEEeCCeeE-------EEecCHHHHHHHhcC
Q 009414           64 KACSKPIPGPRGLPFIGSMSLM-----TNLPHHNLAAAAEAYKAKR-VMAFSLGETRV-------IITCSPDVAKEILNS  130 (535)
Q Consensus        64 ~~~~~~~PgP~~~P~iG~~~~~-----~~~~~~~l~~~~~ky~~G~-v~~~~~g~~~~-------vvv~dp~~i~~i~~~  130 (535)
                      ..+.+.|||+.++|++|+++++     ..++..++.+.++||  |+ ||+++++|.++       |+++||+.++.+|.+
T Consensus        13 ~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~ky--G~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~   90 (480)
T PLN02648         13 SLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKY--KSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDV   90 (480)
T ss_pred             CCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHh--CCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecc
Confidence            4467779999999999999864     346689999999999  88 99999998655       999999999999974


Q ss_pred             ----C-CCCCCCchhhhhhhhcccc---eeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CC
Q 009414          131 ----S-VFADRPVKESAYSLMFNRA---IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GG  200 (535)
Q Consensus       131 ----~-~~~~~~~~~~~~~~~~g~~---~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~  200 (535)
                          + .+... .+..... ++|.+   .++..+|+.|+++|+++ .+.|+ ..++.+.+.|.+.++++++.|...  .+
T Consensus        91 ~~~~~~~~~~~-~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~  166 (480)
T PLN02648         91 SKVDKRDVFTG-TYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELAKK  166 (480)
T ss_pred             hhcccccccee-eeccCcc-ccCCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhC
Confidence                2 21111 2223333 56643   44556899999999999 58898 577889999999999999999653  44


Q ss_pred             CceeHHHHHHHHHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhcccccc-ccccc-cccc-----cchhHHHH
Q 009414          201 SAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNF-SDHLP-WLAD-----FDLQKVRL  273 (535)
Q Consensus       201 ~~vdl~~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P-~l~~-----l~~~~~~~  273 (535)
                      +.+|+.+.++++++|++++++||.+.+.   .  .....+........... .... ...+| ++..     ++ ... .
T Consensus       167 ~~vdv~~~~~~lt~~vi~~~lfG~~~~~---~--~l~~~~~~~~~~~~~~~-~~p~~~~~l~~~~~~~i~~~~~-~~~-~  238 (480)
T PLN02648        167 GKAEFNDPLDQMAFNFLCKALTGKDPSE---T--ALGSDGPALIQKWLALQ-LAPLASTGLPHVLEELLLHTFP-LPF-F  238 (480)
T ss_pred             CCccccchHHHHHHHHHHHHHcCCCcch---h--hhccchhHHHHHHHHHH-hhHHHHcCchHHHHHHhhcccC-Cch-h
Confidence            5799999999999999999999986543   0  00111111111111100 0000 00001 0000     00 000 0


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCCCCCCHHHHHHHHHH-HHHhccccHHHHHHHHHHHHHh
Q 009414          274 RSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWE-MIFRGTDTVAILIEWILARMVL  352 (535)
Q Consensus       274 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~-~~~aG~~tta~~l~~~l~~L~~  352 (535)
                      ...+..+.+.+++++.                 ++.+++...+.+++++|+.++++. +.+++++||+++++|++|+|++
T Consensus       239 ~~~~~~~~~~~~~~~~-----------------~~~ll~~~~~~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~  301 (480)
T PLN02648        239 LVKSDYDKLYDFFRAS-----------------ATEALDLAEKFGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGR  301 (480)
T ss_pred             hhhccHHHHHHHHHHH-----------------HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHc
Confidence            0001111111111111                 112232222246999999999875 4467788888999999999999


Q ss_pred             ChH-HHHHHHHHHHHhhcC-CCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceec----CeeeCCCCEEE
Q 009414          353 HPD-IQSKVHSELDQVVGR-SRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVD----HYHVPAGTTAM  426 (535)
Q Consensus       353 ~p~-~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~----g~~ip~G~~v~  426 (535)
                      ||+ +|++||+|++++.+. +..++++++++||||++||+|+||++|+++..  .|.+.+|++++    ||.||||+.|+
T Consensus       302 ~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~--~r~a~~d~~l~~~~~g~~IpkG~~V~  379 (480)
T PLN02648        302 AGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ--YGRAREDFVIESHDAAFEIKKGEMLF  379 (480)
T ss_pred             CCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc--cceecCCEEEecCCceEEECCCCEEE
Confidence            995 999999999999863 45789999999999999999999999999987  68899999996    79999999999


Q ss_pred             EehhhhhcCCCCCCCCCCCCCCccCCCCCCCcc-ccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcce-eee
Q 009414          427 VNIWAIMRDPEIYADPLKFMPERFVNPEAADMD-ISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFK-WVQ  504 (535)
Q Consensus       427 ~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~-~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~  504 (535)
                      ++.+.+|+||++|+||++|+|+||++++..... .-..+......+||+|+|.|+|++||+.|++++++.|+++|+ |++
T Consensus       380 ~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l  459 (480)
T PLN02648        380 GYQPLVTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEI  459 (480)
T ss_pred             EChHHHhCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEee
Confidence            999999999999999999999999865321100 000000111233477889999999999999999999999998 998


Q ss_pred             cCC
Q 009414          505 SDY  507 (535)
Q Consensus       505 ~~~  507 (535)
                      .++
T Consensus       460 ~~~  462 (480)
T PLN02648        460 EVD  462 (480)
T ss_pred             cCC
Confidence            775


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.3e-54  Score=422.64  Aligned_cols=379  Identities=26%  Similarity=0.391  Sum_probs=305.3

Q ss_pred             hhHHHHHHHHHhcCcceEEEEeCCee--EEEecCHHHHHHHhcCCCCCCCCch-hh---hhhhhcccceeeCcCChhHHH
Q 009414           89 PHHNLAAAAEAYKAKRVMAFSLGETR--VIITCSPDVAKEILNSSVFADRPVK-ES---AYSLMFNRAIGFAPYGVYWRT  162 (535)
Q Consensus        89 ~~~~l~~~~~ky~~G~v~~~~~g~~~--~vvv~dp~~i~~i~~~~~~~~~~~~-~~---~~~~~~g~~~~~~~~g~~w~~  162 (535)
                      +......+.+.|  |.+++++..+..  ++++++++.+++++++..+...... ..   ......|.+.+...+|+.|.+
T Consensus        24 ~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r  101 (411)
T COG2124          24 PRFFLERAEDPY--GDYFTLRLPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTR  101 (411)
T ss_pred             hhhhHHHHhCCC--chhhhhhccCccceEEEEcCHHHHHHHHcCcccccccccccccccchhhhccccceeecCCHHHHH
Confidence            455566677777  778888775543  7999999999999996442222221 11   134556666455569999999


Q ss_pred             HHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHhcccccccCCCCchHHHHHHH
Q 009414          163 LRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSR  242 (535)
Q Consensus       163 ~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~  242 (535)
                      +|+++ ++.|+++.++.+.+.+.+.++++++.+ ..+ +.+++.+.+..++.++|+ .+||.+.+.        ...+..
T Consensus       102 ~Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~--------~~~~~~  169 (411)
T COG2124         102 LRKLL-APAFTPRALRGYRPLIREIADRLLDDL-WQG-GADLVLDFAAELTLRVIA-ELLGVPLED--------RPQLLR  169 (411)
T ss_pred             HHHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-ccC-CchhHHHHhhhhhHHHHH-HHhCCCHHH--------HHHHHH
Confidence            99999 789999999999999999999999999 534 788999999999999999 999977544        223333


Q ss_pred             HHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCCCC--CC
Q 009414          243 LVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR--LS  320 (535)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~--l~  320 (535)
                      ..........        |...   +.....+..++...+.+++..+|++++.     +...|+++.|+.+.++++  +|
T Consensus       170 ~~~~~~~~~~--------~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~-----~~~~dlls~l~~a~~~~~~~ls  233 (411)
T COG2124         170 WSDALLLRLD--------PDLG---PEEPWRRARAARRELDAYLRALIAERRA-----APRDDLLSLLLSAEDDGGGRLS  233 (411)
T ss_pred             HHHHHHhccC--------cccC---CcccHHHHHHHHHHHHHHHHHHHHHhcc-----CCcccHHHHHHHHhhCCCCcCC
Confidence            3332222100        1111   2233557778899999999999999983     233399999999876654  99


Q ss_pred             HHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCC
Q 009414          321 DHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGP  400 (535)
Q Consensus       321 ~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~  400 (535)
                      ++||.++++.+++||+|||+++++|++|.|++||++++++++|.+.                ||++++++|+||++||++
T Consensus       234 d~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~  297 (411)
T COG2124         234 DDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVP  297 (411)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchh
Confidence            9999999999999999999999999999999999999999999874                789999999999999999


Q ss_pred             cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCc
Q 009414          401 LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCP  480 (535)
Q Consensus       401 ~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~  480 (535)
                      ..  .|.+.+|++++|+.||||+.|.++++.+||||++|+||++|+|+||.               +.|+|||+|+|.|+
T Consensus       298 ~~--~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~---------------~~~l~FG~G~H~Cl  360 (411)
T COG2124         298 LA--RRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN---------------NAHLPFGGGPHRCL  360 (411)
T ss_pred             cc--ceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC---------------CCCcCCCCCCcccc
Confidence            95  89999999999999999999999999999999999999999999985               36999999999999


Q ss_pred             chhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEec
Q 009414          481 GKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR  533 (535)
Q Consensus       481 G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  533 (535)
                      |.+||++|++++++.+|++|++....+ .  .......+..+..+..+.++.+
T Consensus       361 G~~lA~~E~~~~l~~ll~r~~~~~~~~-~--~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         361 GAALARLELKVALAELLRRFPLLLLAE-P--PPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CHHHHHHHHHHHHHHHHHhCchhhcCC-C--CCccccccccCCCcceeeeecC
Confidence            999999999999999999999988775 2  1122233444545666666654


No 33 
>PF15050 SCIMP:  SCIMP protein
Probab=88.51  E-value=1.4  Score=33.46  Aligned_cols=55  Identities=22%  Similarity=0.326  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCccccccc---cc----------CCCCCCCCCCCCC-CCCcccccc
Q 009414           29 SILLCMAFFWLAMALCFWAHPGGHAWGKHLY---KK----------GSKACSKPIPGPR-GLPFIGSMS   83 (535)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----------~~~~~~~~~PgP~-~~P~iG~~~   83 (535)
                      .++..+.+.+++.|++.|+++.|..|.--.-   ++          .+.++...||.|+ +.|+.|+..
T Consensus        16 II~vS~~lglIlyCvcR~~lRqGkkweiakp~k~~~rdeEkmYENv~n~~~~~LPpLPPRg~~s~~~~s   84 (133)
T PF15050_consen   16 IILVSVVLGLILYCVCRWQLRQGKKWEIAKPLKQKQRDEEKMYENVLNQSPVQLPPLPPRGSPSPEDSS   84 (133)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccccceeccchhhhcccHHHHHHHhhcCCcCCCCCCCCCCCCCccccC
Confidence            4455566777888889999998888863211   11          1224456778754 588888763


No 34 
>PF10577 UPF0560:  Uncharacterised protein family UPF0560;  InterPro: IPR018890  This family of proteins has no known function. 
Probab=62.59  E-value=12  Score=39.14  Aligned_cols=43  Identities=12%  Similarity=0.244  Sum_probs=21.6

Q ss_pred             chhhhhhhhhcccccchh---------hhHHHHHH-HHHHHHHHHHHHHHhcC
Q 009414            7 CFWVLALASKCKSLTFQN---------NILASILL-CMAFFWLAMALCFWAHP   49 (535)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~---------~~l~~~~~-~~~~~~~~~~~~~~~~~   49 (535)
                      ++|++|.++...-+-++-         -+|..++. .++++++++|+++|.++
T Consensus       246 GYWiAA~~P~~~G~~~~~~~Di~~YHT~fLl~ILG~~~livl~lL~vLl~yCr  298 (807)
T PF10577_consen  246 GYWIAAMSPSSSGPVVSTGSDITTYHTVFLLAILGGTALIVLILLCVLLCYCR  298 (807)
T ss_pred             chhhhccCccccCcccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            789999965544332222         22223332 23334455566666555


No 35 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=53.75  E-value=15  Score=29.38  Aligned_cols=7  Identities=43%  Similarity=0.596  Sum_probs=2.8

Q ss_pred             CCCCCCC
Q 009414           66 CSKPIPG   72 (535)
Q Consensus        66 ~~~~~Pg   72 (535)
                      +...+.|
T Consensus        30 G~~P~~g   36 (130)
T PF12273_consen   30 GLQPIYG   36 (130)
T ss_pred             CCCCcCC
Confidence            3433444


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=51.73  E-value=16  Score=24.09  Aligned_cols=18  Identities=22%  Similarity=0.492  Sum_probs=15.6

Q ss_pred             HHHHHHhChHHHHHHHHH
Q 009414          346 ILARMVLHPDIQSKVHSE  363 (535)
Q Consensus       346 ~l~~L~~~p~~~~~lr~E  363 (535)
                      .+.||.+||++.++|.+.
T Consensus         5 iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHChHHHHHHHcC
Confidence            567999999999999874


No 37 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=42.74  E-value=1e+02  Score=23.38  Aligned_cols=60  Identities=12%  Similarity=0.175  Sum_probs=40.7

Q ss_pred             CCCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeC------CeeEEEecCHHHHHHHhc
Q 009414           66 CSKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLG------ETRVIITCSPDVAKEILN  129 (535)
Q Consensus        66 ~~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g------~~~~vvv~dp~~i~~i~~  129 (535)
                      ..+.||-.-.+-++-|++.  +-..+.+-++.-+|  |+|..+++|      |.-+||-.|-..++....
T Consensus        10 ~~rlppevnriLyirNLp~--~ITseemydlFGky--g~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~d   75 (124)
T KOG0114|consen   10 NIRLPPEVNRILYIRNLPF--KITSEEMYDLFGKY--GTIRQIRIGNTKETRGTAFVVYEDIFDAKKACD   75 (124)
T ss_pred             CCCCChhhheeEEEecCCc--cccHHHHHHHhhcc--cceEEEEecCccCcCceEEEEehHhhhHHHHHH
Confidence            3455665555555555532  23456677788889  999999998      566788788777777665


No 38 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=41.78  E-value=50  Score=23.98  Aligned_cols=42  Identities=17%  Similarity=0.325  Sum_probs=26.1

Q ss_pred             HHHHHhccccHHHHHHHHHHHHHh-------ChHHHHHHHHHHHHhhcC
Q 009414          329 WEMIFRGTDTVAILIEWILARMVL-------HPDIQSKVHSELDQVVGR  370 (535)
Q Consensus       329 ~~~~~aG~~tta~~l~~~l~~L~~-------~p~~~~~lr~Ei~~~~~~  370 (535)
                      +.+++.-.-||+++.--=|..++.       -|++...+|+||-+++..
T Consensus         4 ~dff~~r~~~Sa~~AkeRLQiilA~eR~~~~~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851           4 FDFFFSRKKNSAETAKERLQLILAHERAAGLQPDYLEQLRKEILEVISK   52 (88)
T ss_pred             HHHHHhcCCCcHHHHHHHHHHhhhhhhhcCCCcchHHHHHHHHHHHHHH
Confidence            344443333555555544443332       288999999999998754


No 39 
>PF12955 DUF3844:  Domain of unknown function (DUF3844);  InterPro: IPR024382 This presumed domain is found in fungal species. It contains 8 largely conserved cysteine residues. This domain is found in proteins thought to be located in the endoplasmic reticulum.
Probab=39.04  E-value=77  Score=24.02  Aligned_cols=29  Identities=7%  Similarity=0.125  Sum_probs=20.3

Q ss_pred             ccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 009414           18 KSLTFQNNILASILLCMAFFWLAMALCFW   46 (535)
Q Consensus        18 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   46 (535)
                      ++++..++++++..++++++++..+-++|
T Consensus        62 kDvS~~F~L~~~~ti~lv~~~~~~I~lL~   90 (103)
T PF12955_consen   62 KDVSVPFWLFAGFTIALVVLVAGAIGLLF   90 (103)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            35677788888877777776666556665


No 40 
>PF05568 ASFV_J13L:  African swine fever virus J13L protein;  InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=37.64  E-value=40  Score=26.79  Aligned_cols=29  Identities=10%  Similarity=0.328  Sum_probs=17.0

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHhcC
Q 009414           21 TFQNNILASILLCMAFFWLAMALCFWAHP   49 (535)
Q Consensus        21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   49 (535)
                      +|.+.-|..+++.++++++++.++++++.
T Consensus        25 sffsthm~tILiaIvVliiiiivli~lcs   53 (189)
T PF05568_consen   25 SFFSTHMYTILIAIVVLIIIIIVLIYLCS   53 (189)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            45555566666666666665555555544


No 41 
>PHA03049 IMV membrane protein; Provisional
Probab=37.29  E-value=71  Score=21.65  Aligned_cols=7  Identities=29%  Similarity=0.382  Sum_probs=3.0

Q ss_pred             CCCCCCC
Q 009414           67 SKPIPGP   73 (535)
Q Consensus        67 ~~~~PgP   73 (535)
                      ...||-|
T Consensus        30 q~~~p~~   36 (68)
T PHA03049         30 SQNPPSQ   36 (68)
T ss_pred             CCCCCCh
Confidence            3444443


No 42 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=30.55  E-value=23  Score=22.82  Aligned_cols=11  Identities=45%  Similarity=1.084  Sum_probs=9.3

Q ss_pred             eccCCCCCCCc
Q 009414          470 APFGSGRRTCP  480 (535)
Q Consensus       470 ~~Fg~G~r~C~  480 (535)
                      -+||.|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999999994


No 43 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=30.36  E-value=1.4e+02  Score=22.88  Aligned_cols=12  Identities=25%  Similarity=0.437  Sum_probs=8.6

Q ss_pred             CCCccccccccC
Q 009414           75 GLPFIGSMSLMT   86 (535)
Q Consensus        75 ~~P~iG~~~~~~   86 (535)
                      .-|+-||+....
T Consensus        45 ~~p~YgNL~~~q   56 (107)
T PF15330_consen   45 DDPCYGNLELQQ   56 (107)
T ss_pred             CCcccccccccc
Confidence            488889986653


No 44 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=29.74  E-value=42  Score=29.11  Aligned_cols=44  Identities=16%  Similarity=0.117  Sum_probs=33.2

Q ss_pred             CCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEE
Q 009414          381 SMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMV  427 (535)
Q Consensus       381 ~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~  427 (535)
                      .-..+.|||.|+.-+..-.. +  .=...+|+.++|..||||+.+.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~-v--rlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSR-V--RLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCE-E--EEEEcCceEECCEEeCCCCEEEE
Confidence            34567899999988765433 2  23356899999999999998865


No 45 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=28.94  E-value=53  Score=18.61  Aligned_cols=16  Identities=31%  Similarity=0.636  Sum_probs=13.5

Q ss_pred             CCCceeccCCCCCCCc
Q 009414          465 SDLRLAPFGSGRRTCP  480 (535)
Q Consensus       465 ~~~~~~~Fg~G~r~C~  480 (535)
                      .++.|+|+.+..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4578999999999994


No 46 
>PHA02902 putative IMV membrane protein; Provisional
Probab=27.72  E-value=69  Score=21.46  Aligned_cols=14  Identities=21%  Similarity=0.339  Sum_probs=7.1

Q ss_pred             HHHHHHHHHHHHhc
Q 009414           35 AFFWLAMALCFWAH   48 (535)
Q Consensus        35 ~~~~~~~~~~~~~~   48 (535)
                      ++.++++|+++|..
T Consensus        10 ~v~v~Ivclliya~   23 (70)
T PHA02902         10 AVIVIIFCLLIYAA   23 (70)
T ss_pred             HHHHHHHHHHHHHH
Confidence            34445555555543


No 47 
>PF07095 IgaA:  Intracellular growth attenuator protein IgaA;  InterPro: IPR010771 This family consists of several bacterial intracellular growth attenuator (IgaA) proteins. IgaA is involved in negative control of bacterial proliferation within fibroblasts. IgaA is homologous to the Escherichia coli YrfF and Proteus mirabilis UmoB proteins. Whereas the biological function of YrfF is currently unknown, UmoB has been shown elsewhere to act as a positive regulator of FlhDC, the master regulator of flagella and swarming. FlhDC has been shown to repress cell division during P. mirabilis swarming, suggesting that UmoB could repress cell division via FlhDC. This biological function, if maintained in Salmonella enterica, could sustain a putative negative control of cell division and growth exerted by IgaA in intracellular bacteria [].; GO: 0009276 Gram-negative-bacterium-type cell wall, 0016021 integral to membrane
Probab=27.64  E-value=70  Score=33.14  Aligned_cols=67  Identities=16%  Similarity=0.129  Sum_probs=30.2

Q ss_pred             cchhhhhhhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccCCCCCCCCCCC-CCCCCccccc
Q 009414            6 DCFWVLALASKCKSLTFQNNILASILLCMAFFWLAMALCFWAHPGGHAWGKHLYKKGSKACSKPIPG-PRGLPFIGSM   82 (535)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg-P~~~P~iG~~   82 (535)
                      +.+|.+++....-+|-.-+.++.|++...+++++..++.+|-.+        .  .+..+.....-| |+.|.++|..
T Consensus       207 a~~i~~afll~f~~L~~p~~~~pWL~~~a~l~~~~~~w~lfr~p--------~--~~~lqeVhClrG~PkrwgLfgE~  274 (705)
T PF07095_consen  207 AFLICLAFLLLFISLISPAVLLPWLLAAAALLLAWGLWLLFRPP--------S--PRKLQEVHCLRGTPKRWGLFGES  274 (705)
T ss_pred             HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCC--------c--cccchhhhcccCccceeeeeccc
Confidence            34444444444444444444555664444444443333333211        0  111122334455 7778888854


No 48 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=27.18  E-value=56  Score=26.03  Aligned_cols=24  Identities=17%  Similarity=0.393  Sum_probs=17.1

Q ss_pred             CCCcchhHHHHHHHHHHHHHhhcc
Q 009414          477 RTCPGKGLGLATVSFWVGTLLHEF  500 (535)
Q Consensus       477 r~C~G~~~A~~e~~~~l~~ll~~f  500 (535)
                      ..|.|+.||..++-.++..++..-
T Consensus        18 yN~~gKKFsE~QiN~FIs~lItsP   41 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITSP   41 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS-
T ss_pred             ecccchHHHHHHHHHHHHHHhcCC
Confidence            379999999999999999999843


No 49 
>PF15176 LRR19-TM:  Leucine-rich repeat family 19 TM domain
Probab=26.33  E-value=47  Score=24.74  Aligned_cols=10  Identities=30%  Similarity=0.381  Sum_probs=4.9

Q ss_pred             CCCCcccccc
Q 009414           49 PGGHAWGKHL   58 (535)
Q Consensus        49 ~~~~~~~~~~   58 (535)
                      .|++.|++|+
T Consensus        38 aKC~~~~k~~   47 (102)
T PF15176_consen   38 AKCPVWYKYL   47 (102)
T ss_pred             HHhHHHHHHH
Confidence            3444555554


No 50 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=26.33  E-value=82  Score=19.29  Aligned_cols=20  Identities=25%  Similarity=0.218  Sum_probs=15.8

Q ss_pred             HHHHHHHHHhChHHHHHHHH
Q 009414          343 IEWILARMVLHPDIQSKVHS  362 (535)
Q Consensus       343 l~~~l~~L~~~p~~~~~lr~  362 (535)
                      -.|.++.++++||+|.-|.-
T Consensus        12 gl~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   12 GLFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             CHHHHHHHHcCHHHHHHHHH
Confidence            34677889999999988764


No 51 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=24.36  E-value=45  Score=26.22  Aligned_cols=11  Identities=9%  Similarity=0.214  Sum_probs=5.0

Q ss_pred             hHHHHHHHHHH
Q 009414           26 ILASILLCMAF   36 (535)
Q Consensus        26 ~l~~~~~~~~~   36 (535)
                      .++.+++++++
T Consensus        65 ~i~~Ii~gv~a   75 (122)
T PF01102_consen   65 AIIGIIFGVMA   75 (122)
T ss_dssp             CHHHHHHHHHH
T ss_pred             ceeehhHHHHH
Confidence            34444444443


No 52 
>PF15202 Adipogenin:  Adipogenin
Probab=24.34  E-value=1.5e+02  Score=20.05  Aligned_cols=12  Identities=25%  Similarity=0.288  Sum_probs=6.6

Q ss_pred             hhcccccchhhh
Q 009414           15 SKCKSLTFQNNI   26 (535)
Q Consensus        15 ~~~~~~~~~~~~   26 (535)
                      ++.++|+++.-.
T Consensus         7 plvndltfsflv   18 (81)
T PF15202_consen    7 PLVNDLTFSFLV   18 (81)
T ss_pred             chhchhhHHHHH
Confidence            455666665443


No 53 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=24.31  E-value=2e+02  Score=18.33  Aligned_cols=42  Identities=21%  Similarity=0.295  Sum_probs=30.8

Q ss_pred             HHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHH
Q 009414          323 DIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSEL  364 (535)
Q Consensus       323 ~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei  364 (535)
                      ++..++..++=.|-|..+-.++-.+...--||+.+..+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455566667777777777777777777777888887777765


No 54 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=23.09  E-value=1.7e+02  Score=23.24  Aligned_cols=40  Identities=18%  Similarity=0.243  Sum_probs=29.9

Q ss_pred             CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC
Q 009414           87 NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS  130 (535)
Q Consensus        87 ~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~  130 (535)
                      .+....+.+|.++|  |.+--  ..+..++...|++.++++..+
T Consensus        74 ~~v~~~i~~w~~~~--g~v~l--~~~~~~l~~~d~~~l~~l~~~  113 (129)
T PF13625_consen   74 QNVEQSIEDWARRY--GRVRL--YKGAYLLECDDPELLDELLAD  113 (129)
T ss_pred             HHHHHHHHHHHHhc--CCEEE--ecCeEEEEECCHHHHHHHHhC
Confidence            35677899999999  65522  224667789999999999875


No 55 
>PF02083 Urotensin_II:  Urotensin II;  InterPro: IPR001483 Urotensin II, a small peptide that contains a disulphide bridge, was originally isolated from the caudal portion of the spinal cord of teleost and elasmobranch fish []. The peptide has also been found in the brain of frogs []. Urotensin II seems to be involved in smooth muscle stimulation.; GO: 0005179 hormone activity, 0005576 extracellular region
Probab=22.78  E-value=39  Score=14.32  Aligned_cols=7  Identities=57%  Similarity=1.768  Sum_probs=4.1

Q ss_pred             Ccccchh
Q 009414            3 SKIDCFW    9 (535)
Q Consensus         3 ~~~~~~~    9 (535)
                      .+.+|||
T Consensus         2 ~~~~CFW    8 (12)
T PF02083_consen    2 GKSECFW    8 (12)
T ss_pred             Cccchhh
Confidence            3456666


No 56 
>PHA03162 hypothetical protein; Provisional
Probab=22.57  E-value=71  Score=25.12  Aligned_cols=24  Identities=17%  Similarity=0.419  Sum_probs=20.4

Q ss_pred             CCCCCCCcchhHHHHHHHHHHHHH
Q 009414          473 GSGRRTCPGKGLGLATVSFWVGTL  496 (535)
Q Consensus       473 g~G~r~C~G~~~A~~e~~~~l~~l  496 (535)
                      ++|.+.|||++..+-|+..=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999999988777765


No 57 
>PF09551 Spore_II_R:  Stage II sporulation protein R (spore_II_R);  InterPro: IPR014202  This entry is designated stage II sporulation protein R. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species. SpoIIR is a signalling protein that links the activation of sigma E to the transcriptional activity of sigma F during sporulation [, ].
Probab=22.48  E-value=1e+02  Score=24.60  Aligned_cols=19  Identities=26%  Similarity=0.375  Sum_probs=13.3

Q ss_pred             ccccccceecCeeeCCCCE
Q 009414          406 RLAITDTTVDHYHVPAGTT  424 (535)
Q Consensus       406 R~~~~d~~~~g~~ip~G~~  424 (535)
                      +..-..-.+|++++|+|.+
T Consensus        80 ~~~FPtK~YG~~~~PaG~Y   98 (130)
T PF09551_consen   80 RFYFPTKTYGDIVLPAGEY   98 (130)
T ss_pred             eeeCCCceECCEeccCCce
Confidence            3333445568999999987


No 58 
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ.  Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane.  Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I.  Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center.  ccoQ, the fourth subunit, is a single transmembrane helix protein.  It has been shown to protect the core complex from proteolytic degradation by serine proteases.  See cd00919, cd01322
Probab=21.70  E-value=2.2e+02  Score=18.12  Aligned_cols=22  Identities=14%  Similarity=0.223  Sum_probs=13.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcC
Q 009414           28 ASILLCMAFFWLAMALCFWAHP   49 (535)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~   49 (535)
                      +....++.+.++.++++.|.+.
T Consensus        11 a~~~~l~~~~~~Figiv~wa~~   32 (48)
T cd01324          11 ADSWGLLYLALFFLGVVVWAFR   32 (48)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC
Confidence            3344444455666777778766


No 59 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=21.05  E-value=2.2e+02  Score=20.84  Aligned_cols=18  Identities=22%  Similarity=0.643  Sum_probs=15.4

Q ss_pred             ChHHHHHHHHHHHHhhcC
Q 009414          353 HPDIQSKVHSELDQVVGR  370 (535)
Q Consensus       353 ~p~~~~~lr~Ei~~~~~~  370 (535)
                      .|++++.+++||-+++..
T Consensus        35 ~p~~l~~lk~eil~VIsK   52 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKR   52 (87)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            599999999999988753


No 60 
>PRK06789 flagellar motor switch protein; Validated
Probab=20.83  E-value=1.1e+02  Score=21.63  Aligned_cols=40  Identities=5%  Similarity=0.080  Sum_probs=29.3

Q ss_pred             HHHhhhcCCCCCCccccccccccc--ceecCeeeCCCCEEEEe
Q 009414          388 VVKEVVRLHPPGPLLSWARLAITD--TTVDHYHVPAGTTAMVN  428 (535)
Q Consensus       388 ~i~EtlRl~~~~~~~~~~R~~~~d--~~~~g~~ip~G~~v~~~  428 (535)
                      -++|.+.|.+-..... .|.+-+.  +.++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~L-dk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRL-ENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEe-CCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            4788888888655433 5666664  55599999999999874


No 61 
>PF14824 Sirohm_synth_M:  Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=20.70  E-value=1.3e+02  Score=16.91  Aligned_cols=15  Identities=13%  Similarity=0.525  Sum_probs=11.5

Q ss_pred             ChHHHHHHHHHHHHh
Q 009414          353 HPDIQSKVHSELDQV  367 (535)
Q Consensus       353 ~p~~~~~lr~Ei~~~  367 (535)
                      -|.+-.++|+||++.
T Consensus        15 sP~la~~iR~~ie~~   29 (30)
T PF14824_consen   15 SPRLARLIRKEIERL   29 (30)
T ss_dssp             -HHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHh
Confidence            478888899998864


No 62 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=20.47  E-value=79  Score=25.80  Aligned_cols=22  Identities=27%  Similarity=0.347  Sum_probs=18.0

Q ss_pred             ccccceecCeeeCCCCEEEEeh
Q 009414          408 AITDTTVDHYHVPAGTTAMVNI  429 (535)
Q Consensus       408 ~~~d~~~~g~~ip~G~~v~~~~  429 (535)
                      ..+|+.++|..||+|++-+..+
T Consensus        52 f~~dv~igGk~l~AG~Ysl~ti   73 (145)
T PF11138_consen   52 FSKDVTIGGKKLKAGTYSLFTI   73 (145)
T ss_pred             ECCCeEECCEEcCCeeEEEEEe
Confidence            3478999999999999977644


No 63 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=20.30  E-value=68  Score=25.26  Aligned_cols=22  Identities=23%  Similarity=0.271  Sum_probs=18.1

Q ss_pred             ccccccceecCeeeCCCCEEEE
Q 009414          406 RLAITDTTVDHYHVPAGTTAMV  427 (535)
Q Consensus       406 R~~~~d~~~~g~~ip~G~~v~~  427 (535)
                      =++++|.+++|.+||+|+-|+.
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             EecCCCcccCCeeecceEEEEE
Confidence            3456789999999999999864


No 64 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=20.25  E-value=71  Score=23.16  Aligned_cols=20  Identities=15%  Similarity=0.340  Sum_probs=17.7

Q ss_pred             HHHHHHHHHHhhcceeeecC
Q 009414          487 ATVSFWVGTLLHEFKWVQSD  506 (535)
Q Consensus       487 ~e~~~~l~~ll~~f~~~~~~  506 (535)
                      ..|+-++..+|+-|||.+++
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            45788999999999999986


No 65 
>PF03597 CcoS:  Cytochrome oxidase maturation protein cbb3-type;  InterPro: IPR004714 Cytochrome cbb3 oxidases are found almost exclusively in Proteobacteria, and represent a distinctive class of proton-pumping respiratory haem-copper oxidases (HCO) that lack many of the key structural features that contribute to the reaction cycle of the intensely studied mitochondrial cytochrome c oxidase (CcO). Expression of cytochrome cbb3 oxidase allows human pathogens to colonise anoxic tissues and agronomically important diazotrophs to sustain nitrogen fixation []. Genes encoding a cytochrome cbb3 oxidase were initially designated fixNOQP (ccoNOQP), the ccoNOQP operon is always found close to a second gene cluster, known as fixGHIS (ccoGHIS) whose expression is necessary for the assembly of a functional cbb3 oxidase. On the basis of their derived amino acid sequences each of the four proteins encoded by the ccoGHIS operon are thought to be membrane-bound. It has been suggested that they may function in concert as a multi-subunit complex, possibly playing a role in the uptake and metabolism of copper required for the assembly of the binuclear centre of cytochrome cbb3 oxidase. 
Probab=20.13  E-value=2.1e+02  Score=17.90  Aligned_cols=21  Identities=24%  Similarity=0.382  Sum_probs=12.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhcC
Q 009414           29 SILLCMAFFWLAMALCFWAHP   49 (535)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~   49 (535)
                      .+.+.+++.++.+...+|..+
T Consensus         6 lip~sl~l~~~~l~~f~Wavk   26 (45)
T PF03597_consen    6 LIPVSLILGLIALAAFLWAVK   26 (45)
T ss_pred             HHHHHHHHHHHHHHHHHHHHc
Confidence            344455556666667777655


Done!