Query         009414
Match_columns 535
No_of_seqs    229 out of 2601
Neff          10.9
Searched_HMMs 29240
Date          Mon Mar 25 04:39:41 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009414.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009414hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3pm0_A Cypib1, cytochrome P450 100.0 3.1E-78 1.1E-82  615.7  37.0  457   65-534     6-484 (507)
  2 3tbg_A Cytochrome P450 2D6; mo 100.0 2.4E-77 8.1E-82  604.9  42.9  455   64-535     6-477 (479)
  3 3swz_A Steroid 17-alpha-hydrox 100.0 1.7E-77 5.8E-82  607.6  41.2  454   66-534     6-479 (494)
  4 3k9v_A 1,25-dihydroxyvitamin D 100.0 2.6E-77   9E-82  605.1  40.7  447   65-533    21-482 (482)
  5 3e6i_A CYPIIE1, P450-J, cytoch 100.0 2.3E-76 7.8E-81  597.0  40.6  451   65-535     7-473 (476)
  6 3czh_A Cytochrome P450 2R1; vi 100.0 2.3E-76   8E-81  596.0  40.2  452   67-535    11-477 (481)
  7 2hi4_A Cytochrome P450 1A2; CY 100.0 2.1E-76 7.1E-81  598.9  39.0  454   65-533    13-487 (495)
  8 2fdv_A Cytochrome P450 2A6; CY 100.0 4.2E-76 1.4E-80  594.0  40.3  448   68-534    10-473 (476)
  9 3ld6_A Lanosterol 14-alpha dem 100.0 5.7E-77 1.9E-81  597.8  32.0  443   63-534     6-454 (461)
 10 1r9o_A Cytochrome P450 2C9; mo 100.0   5E-76 1.7E-80  593.9  37.5  449   68-535    11-475 (477)
 11 3s79_A Cytochrome P450 19A1; o 100.0 5.8E-76   2E-80  598.1  37.6  438   67-534    44-496 (503)
 12 1po5_A Cytochrome P450 2B4; ox 100.0 3.9E-76 1.3E-80  594.2  35.8  449   68-535    10-474 (476)
 13 3nxu_A Cytochrome P450 3A4; al 100.0 1.7E-76 5.7E-81  599.3  32.5  445   70-534    16-475 (485)
 14 3qz1_A Steroid 21-hydroxylase; 100.0 2.1E-76 7.3E-81  600.3  32.6  439   65-534    26-484 (496)
 15 3n9y_A Cholesterol SIDE-chain  100.0 1.4E-74 4.7E-79  585.6  38.8  451   63-534     4-475 (487)
 16 2cib_A Cytochrome P450 51; hem 100.0 2.7E-73 9.2E-78  569.5  35.1  439   68-534     4-449 (455)
 17 2ij2_A Cytochrome P450 BM3; mo 100.0   1E-72 3.6E-77  567.3  38.8  440   68-534     3-452 (470)
 18 2ve3_A Putative cytochrome P45 100.0 1.4E-72 4.7E-77  562.6  38.5  430   66-534    10-444 (444)
 19 3gw9_A Sterol 14alpha-demethyl 100.0 2.3E-72   8E-77  563.7  36.8  437   67-534     2-450 (450)
 20 3mdm_A Cholesterol 24-hydroxyl 100.0 9.2E-71 3.1E-75  552.6  42.6  424   87-534    10-442 (456)
 21 3i3k_A Lanosterol 14-alpha dem 100.0 3.4E-72 1.2E-76  563.6  32.2  440   64-531     7-452 (461)
 22 3dbg_A Putative cytochrome P45 100.0 2.5E-72 8.6E-77  565.0  29.1  435   67-533    22-461 (467)
 23 3dax_A Cytochrome P450 7A1; ch 100.0   3E-68   1E-72  539.7  25.3  447   66-534    11-486 (491)
 24 3v8d_A Cholesterol 7-alpha-mon 100.0 1.6E-68 5.4E-73  541.2  22.3  447   66-534    11-486 (491)
 25 3b6h_A Prostacyclin synthase;  100.0 2.5E-66 8.6E-71  526.2  29.7  448   66-535    16-491 (498)
 26 1izo_A P450bsbeta, cytochrome  100.0 2.2E-64 7.6E-69  499.1  36.8  406   69-534     4-416 (417)
 27 2cd8_A Cytochrome P450 monooxy 100.0 7.8E-65 2.7E-69  503.4  30.4  395   67-535    25-430 (436)
 28 1n97_A CYP175A1; electron tran 100.0 3.4E-65 1.2E-69  499.6  22.4  386   72-535     3-388 (389)
 29 3awm_A Fatty acid alpha-hydrox 100.0 2.6E-63 8.9E-68  491.1  35.8  401   70-533     4-413 (415)
 30 3b98_A Prostaglandin I2 syntha 100.0 1.3E-65 4.6E-70  518.1  19.6  435   66-534    16-471 (475)
 31 1ued_A P450 OXYC, P450 monooxy 100.0 1.3E-62 4.5E-67  483.5  29.7  383   67-530     9-406 (406)
 32 1jfb_A Nitric-oxide reductase  100.0 1.5E-61 5.1E-66  476.8  35.3  366   69-506     2-381 (404)
 33 2jjn_A Cytochrome P450 113A1;  100.0 7.2E-62 2.5E-66  479.4  30.9  388   65-535    16-408 (411)
 34 1cpt_A Cytochrome P450-TERP; o 100.0 1.4E-61 4.6E-66  480.0  31.8  400   67-533     5-428 (428)
 35 3aba_A Cytochrome P450; oxidor 100.0 9.3E-61 3.2E-65  469.8  33.3  376   84-533    16-402 (403)
 36 1s1f_A Putative cytochrome P45 100.0 4.1E-61 1.4E-65  472.8  28.9  386   68-531     8-405 (406)
 37 2zbx_A Cytochrome P450-SU1; be 100.0 2.9E-60   1E-64  467.7  34.9  391   68-531     5-407 (412)
 38 2zwu_A Camphor 5-monooxygenase 100.0   1E-60 3.6E-65  470.3  30.7  390   64-535     7-412 (415)
 39 3ejb_B Biotin biosynthesis cyt 100.0 6.6E-60 2.3E-64  465.1  35.7  380   84-534    10-397 (404)
 40 1odo_A Putative cytochrome P45 100.0 4.3E-60 1.5E-64  466.2  32.9  377   84-532    12-407 (408)
 41 3a4g_A Vitamin D hydroxylase;  100.0   1E-59 3.5E-64  463.0  35.2  376   84-535    17-403 (411)
 42 4fb2_A P450CIN; heme, monooxyg 100.0 1.3E-60 4.5E-65  468.6  28.3  376   84-535    16-395 (398)
 43 1gwi_A CYP154C1, cytochrome P4 100.0 1.9E-60 6.6E-65  468.5  29.3  380   84-535    14-411 (411)
 44 3buj_A CALO2; heme, iron, meta 100.0 1.4E-59 4.8E-64  461.1  33.9  375   87-534    13-397 (397)
 45 3abb_A CYP105D6, cytochrome P4 100.0 3.6E-60 1.2E-64  466.8  27.1  376   83-533    20-407 (408)
 46 2xkr_A CYP142, putative cytoch 100.0 5.8E-59   2E-63  456.9  35.6  375   86-535    17-396 (398)
 47 2z36_A MOXA, cytochrome P450 t 100.0 1.2E-59 4.2E-64  462.8  30.8  388   65-531     4-408 (413)
 48 3dsk_A Cytochrome P450 74A, ch 100.0 4.5E-61 1.5E-65  487.2  20.8  423   64-512    24-477 (495)
 49 3dan_A Cytochrome P450 74A2; A 100.0 4.2E-60 1.5E-64  477.6  26.9  412   65-513     6-460 (473)
 50 2z3t_A Cytochrome P450; monoxy 100.0   2E-59 6.7E-64  463.1  30.2  378   86-533    19-416 (425)
 51 1q5d_A P450 epoxidase; cytochr 100.0 4.4E-59 1.5E-63  460.4  31.9  379   85-534    24-417 (419)
 52 2dkk_A Cytochrome P450; CYP158 100.0 8.5E-60 2.9E-64  463.2  26.7  372   87-533    27-410 (411)
 53 2y5n_A MYCG, P-450-like protei 100.0 9.7E-59 3.3E-63  456.6  33.7  374   84-530    34-417 (417)
 54 2xbk_A PIMD protein; epoxidati 100.0 2.2E-58 7.4E-63  451.8  35.9  367   85-530    24-404 (404)
 55 3ivy_A Cytochrome P450 CYP125; 100.0 5.7E-59   2E-63  461.3  31.2  391   67-534    17-429 (433)
 56 3lxh_A Cytochrome P450; heme,  100.0 5.6E-59 1.9E-63  460.2  30.4  377   85-534    36-418 (421)
 57 1z8o_A 6-deoxyerythronolide B  100.0 1.8E-58 6.3E-63  454.0  33.8  373   84-530    11-402 (404)
 58 2wm5_A CYP124, putative cytoch 100.0   7E-58 2.4E-62  453.0  35.3  374   87-530    44-434 (435)
 59 2uuq_A CYP130, cytochrome P450 100.0 4.4E-59 1.5E-63  458.9  26.3  371   87-534    25-414 (414)
 60 3nc3_A Cytochrome P450 CYPX; c 100.0 4.5E-59 1.5E-63  462.5  26.5  384   87-532    53-440 (441)
 61 3tkt_A Cytochrome P450; aromat 100.0 3.1E-58 1.1E-62  458.0  32.4  381   89-532    47-449 (450)
 62 3oft_A Cytochrome P450, CYP101 100.0 1.2E-58   4E-63  454.9  28.9  370   84-531    21-395 (396)
 63 3mgx_A Putative P450 monooxyge 100.0 3.7E-58 1.3E-62  451.8  29.3  369   87-533    37-415 (415)
 64 3tyw_A Putative cytochrome P45 100.0 1.2E-57 4.2E-62  450.1  32.1  352   84-507    26-389 (417)
 65 1n40_A P450 MT2, cytochrome P4 100.0 4.9E-58 1.7E-62  449.4  28.4  368   85-530    14-396 (396)
 66 3r9b_A Cytochrome P450 164A2;  100.0 6.4E-58 2.2E-62  453.0  27.9  380   84-534    26-418 (418)
 67 1lfk_A OXYB, P450 monooxygenas 100.0 2.8E-58 9.7E-63  451.7  24.4  362   93-529    19-397 (398)
 68 3oo3_A OXY protein; cytochrome 100.0 2.3E-57 7.7E-62  443.9  30.4  368   84-529     9-383 (384)
 69 3rwl_A Cytochrome P450 alkane  100.0   1E-56 3.5E-61  443.5  30.4  375   87-532    38-426 (426)
 70 2wiy_A XPLA-heme, cytochrome P 100.0 2.8E-56 9.5E-61  436.4  30.7  372   87-530    20-393 (394)
 71 1io7_A Cytochrome P450 CYP119; 100.0 8.6E-56   3E-60  429.4  28.3  354   89-534     1-368 (368)
 72 3b4x_A 367AA long hypothetical 100.0 1.9E-55 6.5E-60  426.2  28.4  352   89-532     1-366 (367)
 73 3p3o_A Cytochrome P450; monoox 100.0 1.2E-55   4E-60  435.2  27.3  382   76-532    24-415 (416)
 74 2rfb_A Cytochrome P450; heme,  100.0 6.2E-55 2.1E-59  419.1  23.7  320   98-509     2-326 (343)
 75 4dnj_A Putative cytochrome P45 100.0 2.2E-53 7.6E-58  417.8  27.5  384   73-532    17-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 8.1E-49 2.8E-53  384.2  30.5  374   86-530    36-413 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 2.7E-47 9.3E-52  364.7   3.1  330   69-529    35-380 (381)
 78 2diu_A KIAA0430 protein; struc  57.9      19 0.00065   25.9   4.9   51   77-129    12-64  (96)
 79 2krb_A Eukaryotic translation   49.1      48  0.0017   22.4   6.1   50   78-129     5-65  (81)
 80 2l8s_A Integrin alpha-1; trans  41.3      47  0.0016   20.8   4.1   13   35-47     20-32  (54)
 81 1m46_B IQ4, IQ4 motif from MYO  38.9      25 0.00086   17.1   2.1   13  354-366     7-19  (26)
 82 2knc_A Integrin alpha-IIB; tra  37.4      47  0.0016   20.8   3.7   13   35-47     23-35  (54)
 83 2jwa_A Receptor tyrosine-prote  34.9      50  0.0017   19.7   3.3    9   39-47     27-35  (44)
 84 2k1a_A Integrin alpha-IIB; sin  29.9      88   0.003   18.4   4.2   13   35-47     21-33  (42)
 85 3lqv_A PRE-mRNA branch site pr  27.5 1.5E+02  0.0051   21.5   6.2   56   70-129     4-65  (115)
 86 3bej_E Nuclear receptor coacti  26.5      69  0.0024   16.0   2.5   21  479-499     1-21  (26)
 87 2nlw_A Eukaryotic translation   25.7 1.7E+02  0.0057   20.9   6.0   52   76-129    17-79  (105)
 88 2a3j_A U1 small nuclear ribonu  22.3 2.3E+02   0.008   21.2   6.3   52   76-129    31-90  (127)
 89 3ns6_A Eukaryotic translation   22.3 1.3E+02  0.0043   21.3   4.7   50   78-129    10-72  (100)
 90 2dgx_A KIAA0430 protein; RRM d  21.0 1.9E+02  0.0064   20.1   5.3   51   77-129    12-70  (96)
 91 1oo0_B CG8781-PA, drosophila Y  20.6 2.2E+02  0.0077   20.2   5.9   49   77-129    29-86  (110)

No 1  
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.1e-78  Score=615.69  Aligned_cols=457  Identities=25%  Similarity=0.386  Sum_probs=365.5

Q ss_pred             CCCCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhc--CCCCCCCCchhhh
Q 009414           65 ACSKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILN--SSVFADRPVKESA  142 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~--~~~~~~~~~~~~~  142 (535)
                      ++.+.||||+++|++||++.+..+++..+.+++++|  |++|++++|+.++++|+||+.+++|+.  ...|.+++.....
T Consensus         6 ~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~   83 (507)
T 3pm0_A            6 SSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRY--GDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASF   83 (507)
T ss_dssp             ----------------------CCHHHHHHHHHHHH--CSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHH
T ss_pred             CCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHh--CCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHH
Confidence            346679999999999999999889999999999999  999999999999999999999999996  3678888776665


Q ss_pred             hhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhh------hchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHH
Q 009414          143 YSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIN------SAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASL  214 (535)
Q Consensus       143 ~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~------~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~  214 (535)
                      .....|.+++++.+|+.|+++|+.+ .+.|+.....      .+.+.+.++++++++.+.+.  +++.+|+.+++.++++
T Consensus        84 ~~~~~g~~l~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~  162 (507)
T 3pm0_A           84 RVVSGGRSMAFGHYSEHWKVQRRAA-HSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVA  162 (507)
T ss_dssp             HHGGGGTCSSSSCSSHHHHHHHHHH-HHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHHH
T ss_pred             HhhcCCCceEECCCChHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHHH
Confidence            5445567877776899999999999 4655443333      38899999999999999764  4678999999999999


Q ss_pred             HHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchh--HHHHHHHHhhHHHHHHHHHHHHH
Q 009414          215 NNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQ--KVRLRSSKLVPQVNRFVNRIIQE  292 (535)
Q Consensus       215 ~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~--~~~~~~~~~~~~~~~~~~~~i~~  292 (535)
                      |+++.++||.+++.    .++....+.+.+.............+.+|++.+++..  ...+...+..+.+.+++.+.+++
T Consensus       163 dvi~~~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~  238 (507)
T 3pm0_A          163 NVMSAVCFGCRYSH----DDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLR  238 (507)
T ss_dssp             HHHHHHHTSCCCCT----TCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHccccCCC----CCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999876    3345556666666666655555566778888777422  14566777888899999999999


Q ss_pred             HHHhhcCCCCCCcHHHHHhccCC----C------CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHH
Q 009414          293 HRTTQTSLQRNSDFVDVLLSLSG----P------DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHS  362 (535)
Q Consensus       293 ~~~~~~~~~~~~d~l~~ll~~~~----~------~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~  362 (535)
                      +++..+.++...|+++.+++..+    +      .+++++++.+++..+++||+|||+++++|++++|++||++|++||+
T Consensus       239 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~  318 (507)
T 3pm0_A          239 HCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQA  318 (507)
T ss_dssp             HHHHCCTTCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HHhccccccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            88876543334499999986431    1      1489999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCC
Q 009414          363 ELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADP  442 (535)
Q Consensus       363 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p  442 (535)
                      ||++++++++.++++++++||||+|||+||||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||
T Consensus       319 Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp  397 (507)
T 3pm0_A          319 ELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTI-PHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNP  397 (507)
T ss_dssp             HHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCS-CEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTCSSS
T ss_pred             HHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCC-CccccCCceEcCEEECCCCEEEeChHHHhCCcccCCCc
Confidence            99999988888999999999999999999999999999743 79999999999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccc
Q 009414          443 LKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEM  522 (535)
Q Consensus       443 ~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  522 (535)
                      ++|+||||++++...    .......|+|||.|+|+|+|++||++|++++++.||++|++++.++.++++....+++..|
T Consensus       398 ~~F~PeRfl~~~~~~----~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p  473 (507)
T 3pm0_A          398 ENFDPARFLDKDGLI----NKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKP  473 (507)
T ss_dssp             SSCCGGGGBCTTSCB----CHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEESSSEEE
T ss_pred             CccCCCcccCCCCcc----cCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCCCccccC
Confidence            999999999765221    0012357999999999999999999999999999999999999887666665566677766


Q ss_pred             cCceeEEEEecc
Q 009414          523 KNPLTVRVHARR  534 (535)
Q Consensus       523 ~~~~~v~~~~r~  534 (535)
                       .++.|++++|+
T Consensus       474 -~~~~v~~~~R~  484 (507)
T 3pm0_A          474 -KSFKVNVTLRE  484 (507)
T ss_dssp             -CSCCEEEEESS
T ss_pred             -CCcEEEEEEcc
Confidence             46899999986


No 2  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=2.4e-77  Score=604.89  Aligned_cols=455  Identities=24%  Similarity=0.386  Sum_probs=366.1

Q ss_pred             CCCCCCCCCCCCCCccccccccC-CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchh
Q 009414           64 KACSKPIPGPRGLPFIGSMSLMT-NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKE  140 (535)
Q Consensus        64 ~~~~~~~PgP~~~P~iG~~~~~~-~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~  140 (535)
                      ++..+.||||+++|++||++++. .+++..+.+|++||  |+||++++|++++|+|+||+++++|+.+  ..|+.++...
T Consensus         6 ss~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kY--G~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~   83 (479)
T 3tbg_A            6 SSKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRF--GDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVP   83 (479)
T ss_dssp             ---CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHH--CSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCG
T ss_pred             CCCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHh--CCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchH
Confidence            34457899999999999999986 68899999999999  9999999999999999999999999974  6777777665


Q ss_pred             hhhhhhcc---cceeeCcCChhHHHHHHHhhhccCCHhhhhh--chhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHH
Q 009414          141 SAYSLMFN---RAIGFAPYGVYWRTLRRIAATHLFCPKQINS--AEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLN  215 (535)
Q Consensus       141 ~~~~~~~g---~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~--~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~  215 (535)
                      .......+   .+++++.+|+.|+++|+.+ .+.|+...+..  +.+.+....+.+...+....++.+|+.+++..+++|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  162 (479)
T 3tbg_A           84 ITQILGFGPRSQGVFLARYGPAWREQRRFS-VSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSN  162 (479)
T ss_dssp             GGGGGTCBTTBCCSTTCCSSHHHHHHHHHH-HHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHH
T ss_pred             HHHHhccCCCCCceeeCCCCHHHHHHHHHH-HHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHH
Confidence            54443333   5566777899999999999 56777666643  556777777777777777677889999999999999


Q ss_pred             HHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhcccc--ccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHH
Q 009414          216 NMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKL--NFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEH  293 (535)
Q Consensus       216 vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  293 (535)
                      +++.++||.+++.    .++...................  ......|+...+  .....+.....+...+.+.+.++++
T Consensus       163 ~~~~~~fg~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  236 (479)
T 3tbg_A          163 VIASLTCGRRFEY----DDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAFLTQLDELLTEH  236 (479)
T ss_dssp             HHHHHHHSCCCCT----TCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCcccc----cchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999877    3334444444444443332221  112233444333  3344455666677777888888877


Q ss_pred             HHhhcCCCCCCcHHHHHhcc------CCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHh
Q 009414          294 RTTQTSLQRNSDFVDVLLSL------SGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQV  367 (535)
Q Consensus       294 ~~~~~~~~~~~d~l~~ll~~------~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~  367 (535)
                      .+..+......|+++.+...      .....++++++.+++..+++||+|||+++++|++|+|++||++|+|||+||+.+
T Consensus       237 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~  316 (479)
T 3tbg_A          237 RMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDV  316 (479)
T ss_dssp             HHHCCTTSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             HHhhhcccccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence            77655444444777665432      123469999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCC
Q 009414          368 VGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMP  447 (535)
Q Consensus       368 ~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  447 (535)
                      ++.++.++.+++++||||+|||+||||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|
T Consensus       317 ~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~-~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~P  395 (479)
T 3tbg_A          317 IGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGV-THMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHP  395 (479)
T ss_dssp             TCSSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCC-CEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCG
T ss_pred             Hhhccccchhhhccccccccceeeeccccccccccc-eeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCc
Confidence            988899999999999999999999999999999874 6678899999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCC-ccccccccccccCce
Q 009414          448 ERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVD-LSEVLRLSCEMKNPL  526 (535)
Q Consensus       448 ~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~  526 (535)
                      |||++++...      ..+.+|+|||+|+|+|+|++||++|+++++|.||++|+|++.+|++.+ .....+++..| +++
T Consensus       396 eRfl~~~~~~------~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P-~~~  468 (479)
T 3tbg_A          396 EHFLDAQGHF------VKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSP-SPY  468 (479)
T ss_dssp             GGGBCTTCCB------CCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEE-CCC
T ss_pred             cccCCCCccc------CCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecC-CCe
Confidence            9999765221      245789999999999999999999999999999999999998876543 34456677777 689


Q ss_pred             eEEEEeccC
Q 009414          527 TVRVHARRR  535 (535)
Q Consensus       527 ~v~~~~r~~  535 (535)
                      .|+++||++
T Consensus       469 ~v~~~pRs~  477 (479)
T 3tbg_A          469 ELCAVPRHH  477 (479)
T ss_dssp             CBEEEEC--
T ss_pred             EEEEEECCC
Confidence            999999985


No 3  
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=1.7e-77  Score=607.55  Aligned_cols=454  Identities=26%  Similarity=0.427  Sum_probs=375.1

Q ss_pred             CCCCCCCCCCCCccccccccC--CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhh
Q 009414           66 CSKPIPGPRGLPFIGSMSLMT--NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKES  141 (535)
Q Consensus        66 ~~~~~PgP~~~P~iG~~~~~~--~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~  141 (535)
                      ..+.||||+++|++||++++.  +.++..+.+|+++|  |+||++++|+.++|+|+||+.+++++..  ..|.+++....
T Consensus         6 ~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kY--G~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~   83 (494)
T 3swz_A            6 GAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKY--GPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT   83 (494)
T ss_dssp             ------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHH--CSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred             CCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHc--CCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence            466799999999999999886  36789999999999  9999999999999999999999999974  67888877654


Q ss_pred             hhhhhc-ccceeeCcCChhHHHHHHHhhhccCCH--hhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHH
Q 009414          142 AYSLMF-NRAIGFAPYGVYWRTLRRIAATHLFCP--KQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMM  218 (535)
Q Consensus       142 ~~~~~~-g~~~~~~~~g~~w~~~Rr~l~~~~fs~--~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~  218 (535)
                      ...... +.++++..+|+.|+++|+++ .+.|+.  ..++.+.+.+.++++.+++.+.+.+++.+|+.+++..+++|+++
T Consensus        84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~  162 (494)
T 3swz_A           84 LDIASNNRKGIAFADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVIS  162 (494)
T ss_dssp             HHHHTTTTCSSSSSCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHH
T ss_pred             HHHhccCCCCeEeCCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHH
Confidence            432222 46777776799999999999 577864  45778999999999999999987667789999999999999999


Q ss_pred             HHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 009414          219 CSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQT  298 (535)
Q Consensus       219 ~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  298 (535)
                      .++||.+++.    +++....+....+.+........+.+++|++.+++ ....+...+..+.+.+++...++++++...
T Consensus       163 ~~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  237 (494)
T 3swz_A          163 LICFNTSYKN----GDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFP-NKTLEKLKSHVKIRNDLLNKILENYKEKFR  237 (494)
T ss_dssp             HHHHSCCCCT----TCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSC-CSHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             HHHcCCcCCC----CCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999998865    22344444444455555555556677889988874 334456667777888888888888776554


Q ss_pred             CCCCCCcHHHHHhccC------------CCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHH
Q 009414          299 SLQRNSDFVDVLLSLS------------GPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQ  366 (535)
Q Consensus       299 ~~~~~~d~l~~ll~~~------------~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~  366 (535)
                      .+... |+++.|++..            ..+.++++++..++..+++||+|||+++++|++++|++||++|+++|+||++
T Consensus       238 ~~~~~-d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~  316 (494)
T 3swz_A          238 SDSIT-NMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ  316 (494)
T ss_dssp             TTCCC-SHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             ccchh-HHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            43444 9999998753            1124889999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCC
Q 009414          367 VVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFM  446 (535)
Q Consensus       367 ~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  446 (535)
                      +++.++.++++++++||||+|||+|+||++|+++... +|.+.+|++++||.||||+.|.++.|++|+||++|+||++|+
T Consensus       317 v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~  395 (494)
T 3swz_A          317 NVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLI-PHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFM  395 (494)
T ss_dssp             HTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCS-CEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTSCC
T ss_pred             hcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCccccc-ceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCcccCC
Confidence            9998889999999999999999999999999999743 899999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCC-CCccccccccccccCc
Q 009414          447 PERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDP-VDLSEVLRLSCEMKNP  525 (535)
Q Consensus       447 P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~  525 (535)
                      ||||++++...    .......|+|||.|+|+|+|++||++|++++++.||++|+|++.++.+ .+.....+++..| .+
T Consensus       396 PeRfl~~~~~~----~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p-~~  470 (494)
T 3swz_A          396 PERFLNPAGTQ----LISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLI-DS  470 (494)
T ss_dssp             GGGGBCTTSSS----BCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEEC-CC
T ss_pred             cccccCCCCcc----ccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecC-CC
Confidence            99999765221    112346799999999999999999999999999999999999876533 3344455666665 78


Q ss_pred             eeEEEEecc
Q 009414          526 LTVRVHARR  534 (535)
Q Consensus       526 ~~v~~~~r~  534 (535)
                      +.|++++|+
T Consensus       471 ~~v~~~~R~  479 (494)
T 3swz_A          471 FKVKIKVRQ  479 (494)
T ss_dssp             CCEEEEECH
T ss_pred             cEEEEEEcC
Confidence            999999985


No 4  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=2.6e-77  Score=605.07  Aligned_cols=447  Identities=21%  Similarity=0.335  Sum_probs=371.4

Q ss_pred             CCCCCCCCCCCCCccccccccC-----CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC-CCCCCCCc
Q 009414           65 ACSKPIPGPRGLPFIGSMSLMT-----NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS-SVFADRPV  138 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~~-----~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~~~  138 (535)
                      ++++.+|||+++|++||++.+.     ++++..+.+++++|  |+||++++|+.++|+|+||+.+++|+.+ ..|.+++.
T Consensus        21 ~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~Y--G~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~r~~   98 (482)
T 3k9v_A           21 RNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKY--GQIFRMKLGSFDSVHLGSPSLLEALYRTESAHPQRLE   98 (482)
T ss_dssp             EEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHH--CSEEEEEETTEEEEEECSHHHHHHHHHTCCSSCCCCC
T ss_pred             CCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHc--CCEEEEccCCCCEEEEcCHHHHHHHHHhcCCCCCCCC
Confidence            4577899999999999998872     46889999999999  9999999999999999999999999985 57777765


Q ss_pred             hhhh--hhh--hcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh---CCCceeHHHHHHH
Q 009414          139 KESA--YSL--MFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY---GGSAFRLRDILKP  211 (535)
Q Consensus       139 ~~~~--~~~--~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~---~~~~vdl~~~~~~  211 (535)
                      ....  ...  ..+.++++. +|+.|+++||.+...+++++.++.+.+.++++++.+++.+.+.   +++++|+.+++.+
T Consensus        99 ~~~~~~~~~~~~~~~~l~~~-~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~  177 (482)
T 3k9v_A           99 IKPWKAYRDHRNEAYGLMIL-EGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNK  177 (482)
T ss_dssp             CHHHHHHHHHHTCCCCTTTC-CHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHH
T ss_pred             chHHHHHHHhcCCCCCceeC-CCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHH
Confidence            4322  111  134666554 8999999999995444588999999999999999999999875   4568999999999


Q ss_pred             HHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccc--cccccchhHHHHHHHHhhHHHHHHHHHH
Q 009414          212 ASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLP--WLADFDLQKVRLRSSKLVPQVNRFVNRI  289 (535)
Q Consensus       212 ~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P--~l~~l~~~~~~~~~~~~~~~~~~~~~~~  289 (535)
                      +++|+++.++||.+++.++....+....+.+.+..........   ..+|  ++.++ +....+...+..+.+.+++.+.
T Consensus       178 ~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~  253 (482)
T 3k9v_A          178 WSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKM---MVTPVELHKRL-NTKVWQAHTLAWDTIFKSVKPC  253 (482)
T ss_dssp             HHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGG---SSSCHHHHHHH-TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHH---HhhhHHHHHhc-CCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999997754332234455666666655443322   2233  22222 2234455666677888888899


Q ss_pred             HHHHHHhhcCCCCCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhc
Q 009414          290 IQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVG  369 (535)
Q Consensus       290 i~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  369 (535)
                      |++++++...+... |+++.+++.   ++++++++.+++..+++||+|||+++++|++++|++||++|+++|+||+++++
T Consensus       254 i~~r~~~~~~~~~~-d~l~~ll~~---~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~  329 (482)
T 3k9v_A          254 IDNRLQRYSQQPGA-DFLCDIYQQ---DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLP  329 (482)
T ss_dssp             HHHHHHHTTTCTTS-CHHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHhccCCch-HHHHHHHhc---cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence            99888765433334 888888764   35899999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCc
Q 009414          370 RSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPER  449 (535)
Q Consensus       370 ~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  449 (535)
                      +++.++++++++||||+|||+|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|||
T Consensus       330 ~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~--~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR  407 (482)
T 3k9v_A          330 DNQTPRAEDLRNMPYLKACLKESMRLTPSVPFT--TRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPER  407 (482)
T ss_dssp             TTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEE--EEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTTSCCGGG
T ss_pred             CCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCc--ccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcCccCccc
Confidence            888999999999999999999999999999986  899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEE
Q 009414          450 FVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVR  529 (535)
Q Consensus       450 ~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  529 (535)
                      |++++..       ..+..|+|||.|+|+|+|++||++|++++++.|+++|++++.++.+++  .....+..|+++++|+
T Consensus       408 fl~~~~~-------~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~p~~~~~~~  478 (482)
T 3k9v_A          408 WLQKEKK-------INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVE--MLHLGILVPSRELPIA  478 (482)
T ss_dssp             GTCTTSC-------CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCCC--EEESSSEEESSSCCEE
T ss_pred             cCCCCCC-------CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCcc--cccceeecCCCCcceE
Confidence            9976521       245689999999999999999999999999999999999998765443  3445677899999999


Q ss_pred             EEec
Q 009414          530 VHAR  533 (535)
Q Consensus       530 ~~~r  533 (535)
                      +++|
T Consensus       479 ~~~R  482 (482)
T 3k9v_A          479 FRPR  482 (482)
T ss_dssp             EEEC
T ss_pred             EeeC
Confidence            9987


No 5  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=2.3e-76  Score=597.04  Aligned_cols=451  Identities=24%  Similarity=0.382  Sum_probs=369.4

Q ss_pred             CCCCCCCCCCCCCccccccccC-CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhh
Q 009414           65 ACSKPIPGPRGLPFIGSMSLMT-NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKES  141 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~~-~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~  141 (535)
                      ++.+.||||+++|++||++++. .+++..+.+|+++|  |++|++++|+.++++|+||+.+++|+.+  ..|++++....
T Consensus         7 ~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~y--G~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~   84 (476)
T 3e6i_A            7 SKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRF--GPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPA   84 (476)
T ss_dssp             ---CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHH--CSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGG
T ss_pred             CCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHh--CCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCch
Confidence            4466799999999999999984 78999999999999  9999999999999999999999999974  56777766544


Q ss_pred             hhhhhcccceeeCcCChhHHHHHHHhhhccCCHhhh--hhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHH
Q 009414          142 AYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQI--NSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMC  219 (535)
Q Consensus       142 ~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l--~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~  219 (535)
                      ... ..+.++++. +|+.|+++|++. .+.|+...+  ..+++.++++++.+++.+.+..++++|+.+++..+++|+++.
T Consensus        85 ~~~-~~~~~l~~~-~g~~w~~~Rr~~-~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi~~  161 (476)
T 3e6i_A           85 FHA-HRDRGIIFN-NGPTWKDIRRFS-LTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIAD  161 (476)
T ss_dssp             GGG-GTTSSSTTC-CSTTHHHHHHHH-HHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHHHH
T ss_pred             hhe-ecCCCEEec-CCcHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHHHH
Confidence            433 333466555 899999999987 455554333  346789999999999999876677899999999999999999


Q ss_pred             HHhcccccccCCCCchHHHHHHHHHHHHHHhccc--cccccccc-cccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009414          220 SVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGK--LNFSDHLP-WLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTT  296 (535)
Q Consensus       220 ~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  296 (535)
                      ++||.+++.    .++....+...+...+.....  ....+.+| ++.+++  ...++..+..+.+.+++.+.|+++++.
T Consensus       162 ~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~~~~~~  235 (476)
T 3e6i_A          162 ILFRKHFDY----NDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP--GSHRKVIKNVAEVKEYVSERVKEHHQS  235 (476)
T ss_dssp             HHHSCCCCT----TCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHcCCCCCC----CCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999876    234455566666555544332  12234456 555553  234566777888999999999998877


Q ss_pred             hcCCCCCCcHHHHHhccCC------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcC
Q 009414          297 QTSLQRNSDFVDVLLSLSG------PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGR  370 (535)
Q Consensus       297 ~~~~~~~~d~l~~ll~~~~------~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  370 (535)
                      .+.+... |+++.++....      +..++++++.+++..+++||+|||+++++|++++|++||++|++||+||+++++.
T Consensus       236 ~~~~~~~-d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~  314 (476)
T 3e6i_A          236 LDPNCPR-DLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGP  314 (476)
T ss_dssp             CCTTSCC-SHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCCCc-cHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCC
Confidence            5544444 99999886432      2358999999999999999999999999999999999999999999999999988


Q ss_pred             CCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCcc
Q 009414          371 SRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERF  450 (535)
Q Consensus       371 ~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~  450 (535)
                      +..++++++++||||+|||+|+||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||
T Consensus       315 ~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR~  393 (476)
T 3e6i_A          315 SRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNL-PHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHF  393 (476)
T ss_dssp             TSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCS-CEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGG
T ss_pred             CCCCChhhccCCchHHHHHHHHHHhccCCCccc-cccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCchhh
Confidence            888999999999999999999999999999632 7999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecC-CCCCCcccc-ccccccccCceeE
Q 009414          451 VNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSD-YDPVDLSEV-LRLSCEMKNPLTV  528 (535)
Q Consensus       451 l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~-~~~~~~~~~-~~~~~~~~~~~~v  528 (535)
                      ++++..      ......|+|||.|+|+|+|++||++|++++++.|+++|++++.. +.+.++... .+++..| .++.|
T Consensus       394 l~~~~~------~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~  466 (476)
T 3e6i_A          394 LNENGK------FKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIP-PRYKL  466 (476)
T ss_dssp             BCTTSS------BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEEC-CCCCE
T ss_pred             cCCCCC------ccCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCC-CCeEE
Confidence            976522      12456799999999999999999999999999999999999854 334444443 5666656 68999


Q ss_pred             EEEeccC
Q 009414          529 RVHARRR  535 (535)
Q Consensus       529 ~~~~r~~  535 (535)
                      ++++|+.
T Consensus       467 ~~~~R~~  473 (476)
T 3e6i_A          467 CVIPRSH  473 (476)
T ss_dssp             EEEECC-
T ss_pred             EEEeccc
Confidence            9999974


No 6  
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=2.3e-76  Score=596.02  Aligned_cols=452  Identities=25%  Similarity=0.424  Sum_probs=371.5

Q ss_pred             CCCCCCCCCCCccccccccCCC---hhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhh
Q 009414           67 SKPIPGPRGLPFIGSMSLMTNL---PHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKES  141 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~~~---~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~  141 (535)
                      .+.||||+++|++||++.+...   ++..+.+++++|  |+||++++|+.++++|+||+.+++|+.+  ..|++++....
T Consensus        11 ~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~y--G~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~   88 (481)
T 3czh_A           11 MGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVY--GEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL   88 (481)
T ss_dssp             -CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHH--CSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred             CCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHh--CCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence            4569999999999999887543   899999999999  9999999999999999999999999985  46877765433


Q ss_pred             hhhhhcccceeeCcCChhHHHHHHHhhhccCCHhhh--hhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHH
Q 009414          142 AYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQI--NSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMC  219 (535)
Q Consensus       142 ~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l--~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~  219 (535)
                      ......+.++++..+|+.|+++|+++ .+.|+...+  ..+++.++++++++++.+.+.+++++|+.+++.++++|+++.
T Consensus        89 ~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~  167 (481)
T 3czh_A           89 FMKMTKMGGLLNSRYGRGWVDHRRLA-VNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITNL  167 (481)
T ss_dssp             HHHHHTTCSSTTCCSSHHHHHHHHHH-HHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHHHHHH
T ss_pred             HHhhcCCCCeEeCCCChHHHHHHHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHHH
Confidence            32222234655556899999999999 677876544  678999999999999999876566899999999999999999


Q ss_pred             HHhcccccccCCCCchHHHHHHHHHHHHHHhccccc--cccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhh
Q 009414          220 SVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLN--FSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQ  297 (535)
Q Consensus       220 ~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  297 (535)
                      ++||.+++.    ++++...+.+.+...+.......  +...+|++.+++ ....++..+..+.+.+++.+.|+++++..
T Consensus       168 ~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~  242 (481)
T 3czh_A          168 IIFGERFTY----EDTDFQHMIELFSENVELAASASVFLYNAFPWIGILP-FGKHQQLFRNAAVVYDFLSRLIEKASVNR  242 (481)
T ss_dssp             HHHSSCCCT----TCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCS-SSHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHcCCCCCC----CCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCC-chHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999998764    23455556555555554433221  345678776553 23445667778889999999999888654


Q ss_pred             cCCCCCCcHHHHHhccCC------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCC
Q 009414          298 TSLQRNSDFVDVLLSLSG------PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRS  371 (535)
Q Consensus       298 ~~~~~~~d~l~~ll~~~~------~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~  371 (535)
                      +.+..+ |+++.|++...      +.+++++++.+++..+++||+|||+++++|++++|++||++|++||+|++++++++
T Consensus       243 ~~~~~~-d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~  321 (481)
T 3czh_A          243 KPQLPQ-HFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPN  321 (481)
T ss_dssp             CTTCCS-SHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS
T ss_pred             CCCchH-HHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCC
Confidence            332334 99999987531      23699999999999999999999999999999999999999999999999999877


Q ss_pred             CCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccC
Q 009414          372 RPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFV  451 (535)
Q Consensus       372 ~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  451 (535)
                      +.++++++++||||+|||+|+||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||+
T Consensus       322 ~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~-~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l  400 (481)
T 3czh_A          322 GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGI-FHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFL  400 (481)
T ss_dssp             SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCS-CEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGGB
T ss_pred             CCCChhhhhhChHHHHHHHHHHhhccccccCc-ceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCCcee
Confidence            88999999999999999999999999999532 79999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEE
Q 009414          452 NPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVH  531 (535)
Q Consensus       452 ~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  531 (535)
                      +++..      ...+..|+|||.|+|+|+|++||++|++++++.||++|++++.++.+.+.....+++..| .++.++++
T Consensus       401 ~~~~~------~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~  473 (481)
T 3czh_A          401 DSSGY------FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQP-QPYLICAE  473 (481)
T ss_dssp             CTTSC------BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCC-CCCCBEEE
T ss_pred             CCCCC------CcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecC-CceEEEEE
Confidence            75421      124568999999999999999999999999999999999998765444444445666666 68899999


Q ss_pred             eccC
Q 009414          532 ARRR  535 (535)
Q Consensus       532 ~r~~  535 (535)
                      ||-+
T Consensus       474 ~~~~  477 (481)
T 3czh_A          474 RRHH  477 (481)
T ss_dssp             ECC-
T ss_pred             eccc
Confidence            9854


No 7  
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=2.1e-76  Score=598.91  Aligned_cols=454  Identities=24%  Similarity=0.380  Sum_probs=371.9

Q ss_pred             CCCCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhh
Q 009414           65 ACSKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESA  142 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~  142 (535)
                      ++++.+|||+++|++||++.+.++++..+.+++++|  |+||++++|++++++|+||+.+++|+.+  ..|++++.....
T Consensus        13 ~~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~y--G~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~   90 (495)
T 2hi4_A           13 KGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRY--GDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTS   90 (495)
T ss_dssp             TTCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHH--CSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHH
T ss_pred             CCCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHh--CCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHH
Confidence            446667999999999999988888999999999999  9999999999999999999999999974  468877655433


Q ss_pred             hhhhcccceeeC-cCChhHHHHHHHhhhccCC---Hhhh---h---hchhHHHHHHHHHHHHHHh--hCCCceeHHHHHH
Q 009414          143 YSLMFNRAIGFA-PYGVYWRTLRRIAATHLFC---PKQI---N---SAEPQRSDIASQMVSMIAS--YGGSAFRLRDILK  210 (535)
Q Consensus       143 ~~~~~g~~~~~~-~~g~~w~~~Rr~l~~~~fs---~~~l---~---~~~~~~~~~~~~lv~~l~~--~~~~~vdl~~~~~  210 (535)
                      .....|.+++++ .+|+.|+++|+++ .+.|+   ..+.   +   .+++.+.++++++++.+.+  .+++++|+.+++.
T Consensus        91 ~~~~~~~~l~~~~~~g~~w~~~Rr~~-~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~  169 (495)
T 2hi4_A           91 TLITDGQSLTFSTDSGPVWAARRRLA-QNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVV  169 (495)
T ss_dssp             HTSTTSCCTTTSSCCSHHHHHHHHHH-HHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHH
T ss_pred             HHhcCCCCEEEcCCCChHHHHHHHHH-HHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHH
Confidence            222335666555 4799999999999 56543   3333   2   6899999999999999976  3567899999999


Q ss_pred             HHHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHH
Q 009414          211 PASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRII  290 (535)
Q Consensus       211 ~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i  290 (535)
                      .+++|+++.++||.+++.    ++++...+.+....+...........++|++.+++ ....++..++.+.+.+++.+.|
T Consensus       170 ~~~~dvi~~~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp-~~~~~~~~~~~~~~~~~~~~~i  244 (495)
T 2hi4_A          170 VSVANVIGAMCFGQHFPE----SSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLP-NPALQRFKAFNQRFLWFLQKTV  244 (495)
T ss_dssp             HHHHHHHHHHHHGGGSCT----TCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSC-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCC----CCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcC-chHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998764    22344555555555555443333456788887663 3445567778888999999999


Q ss_pred             HHHHHhhcCCCCCCcHHHHHhccC---C---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHH
Q 009414          291 QEHRTTQTSLQRNSDFVDVLLSLS---G---PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSEL  364 (535)
Q Consensus       291 ~~~~~~~~~~~~~~d~l~~ll~~~---~---~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei  364 (535)
                      +++++..+.++.+ |+++.+++..   +   +..++++++.+++..+++||+|||+++++|++++|++||++|++||+||
T Consensus       245 ~~r~~~~~~~~~~-d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei  323 (495)
T 2hi4_A          245 QEHYQDFDKNSVR-DITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKEL  323 (495)
T ss_dssp             HHHHHTCCTTCCC-SHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             HHHHHhhcccccc-cHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence            9988764433334 9999998532   1   2258999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCC
Q 009414          365 DQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLK  444 (535)
Q Consensus       365 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  444 (535)
                      ++++++++.++++++++||||+|||+|+||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||++
T Consensus       324 ~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~-~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~  402 (495)
T 2hi4_A          324 DTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTI-PHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSE  402 (495)
T ss_dssp             HHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCS-CEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTTS
T ss_pred             HHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCC-ccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcCc
Confidence            999987788999999999999999999999999999632 7999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccC
Q 009414          445 FMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKN  524 (535)
Q Consensus       445 F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  524 (535)
                      |+||||++++....+   ...+..|+|||.|+|+|+|++||++|++++++.|+++|++++.++.+.++....+++..|+ 
T Consensus       403 F~PeRfl~~~~~~~~---~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-  478 (495)
T 2hi4_A          403 FRPERFLTADGTAIN---KPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHA-  478 (495)
T ss_dssp             CCGGGGBCTTSSSBC---HHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSSCBCC-
T ss_pred             cCcccccCCCCcccc---cCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCceecCC-
Confidence            999999975421000   0124579999999999999999999999999999999999988765444555557777774 


Q ss_pred             ce-eEEEEec
Q 009414          525 PL-TVRVHAR  533 (535)
Q Consensus       525 ~~-~v~~~~r  533 (535)
                      ++ .|+++ |
T Consensus       479 ~~~~v~~~-R  487 (495)
T 2hi4_A          479 RCEHVQAR-R  487 (495)
T ss_dssp             CCCCBEEE-C
T ss_pred             CcceEEEE-E
Confidence            56 88888 7


No 8  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=4.2e-76  Score=594.01  Aligned_cols=448  Identities=22%  Similarity=0.393  Sum_probs=369.4

Q ss_pred             CCCCCCCCCCccccccccC-CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhh
Q 009414           68 KPIPGPRGLPFIGSMSLMT-NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYS  144 (535)
Q Consensus        68 ~~~PgP~~~P~iG~~~~~~-~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~  144 (535)
                      +.||||+++|++||++.+. .+++..+.+++++|  |+||++++|+.++++|+||+.+++|+.+  ..|++++.......
T Consensus        10 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~y--G~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~   87 (476)
T 2fdv_A           10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERY--GPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW   87 (476)
T ss_dssp             BCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHH--CSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHH
T ss_pred             CCCCCCCCCcccccHhhcCCcchHHHHHHHHHHh--CCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhh
Confidence            4689999999999999984 68899999999999  9999999999999999999999999953  56776655433322


Q ss_pred             hhcccceeeCcCChhHHHHHHHhhhccCCHhhh--hhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHh
Q 009414          145 LMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQI--NSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVF  222 (535)
Q Consensus       145 ~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l--~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~f  222 (535)
                      ...|.++++. +|+.|+++|+++ .+.|+...+  +.+.+.+.++++++++.+.+.+++++|+.+++..+++|+++.++|
T Consensus        88 ~~~~~~l~~~-~g~~~~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~f  165 (476)
T 2fdv_A           88 VFKGYGVVFS-NGERAKQLRRFS-IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVF  165 (476)
T ss_dssp             HHTTCSSSSC-CHHHHHHHHHHH-HHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCeEec-CchHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHHc
Confidence            3345677655 899999999999 678988766  789999999999999999876567899999999999999999999


Q ss_pred             cccccccCCCCchHHHHHHHHHHHHHHhcccc--cccccccc-ccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcC
Q 009414          223 GRKYALLGYSSNTEARRLSRLVEEGYDLLGKL--NFSDHLPW-LADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTS  299 (535)
Q Consensus       223 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  299 (535)
                      |.+++.    ++++...+.+.+...+......  .+.+.+|+ +.+++  ...++..++.+.+.+++.+.|+++++..+.
T Consensus       166 G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  239 (476)
T 2fdv_A          166 GDRFDY----KDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP--GPQQQAFQLLQGLEDFIAKKVEHNQRTLDP  239 (476)
T ss_dssp             SSCCCT----TCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred             CCcCCC----CCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            998875    2234555555555554432211  12334565 44442  233556677888999999999988765433


Q ss_pred             CCCCCcHHHHHhccCC------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCC
Q 009414          300 LQRNSDFVDVLLSLSG------PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRP  373 (535)
Q Consensus       300 ~~~~~d~l~~ll~~~~------~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  373 (535)
                      +..+ |+++.+++...      +.+++++++.+++..+++||+|||+++++|++++|++||++|++||+||++++++++.
T Consensus       240 ~~~~-d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~  318 (476)
T 2fdv_A          240 NSPR-DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ  318 (476)
T ss_dssp             TSCC-SHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSC
T ss_pred             CCCc-cHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCC
Confidence            2334 99999987531      2468999999999999999999999999999999999999999999999999987778


Q ss_pred             CChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCC
Q 009414          374 LTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNP  453 (535)
Q Consensus       374 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  453 (535)
                      ++++++++||||+|||+|+||++|+++... +|.+.+|++++|+.||||+.|.++.+++|+||++|+||++|+||||+++
T Consensus       319 ~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~-~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l~~  397 (476)
T 2fdv_A          319 PKFEDRAKMPYMEAVIHEIQRFGDVIPMSL-ARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE  397 (476)
T ss_dssp             CCGGGGGGCHHHHHHHHHHHHHHCSSTTCS-CEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCT
T ss_pred             CChhhhhcChHHHHHHHHHHHhcCCcccCc-ceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhCCC
Confidence            999999999999999999999999999422 8999999999999999999999999999999999999999999999975


Q ss_pred             CCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCC-CCccc-cccccccccCceeEEEE
Q 009414          454 EAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDP-VDLSE-VLRLSCEMKNPLTVRVH  531 (535)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~-~~~~~~~~~~~~~v~~~  531 (535)
                      +...      ..+..|+|||.|+|.|+|++||++|++++++.|+++|++++.++.+ .++.. ..+++..| .++.|+++
T Consensus       398 ~~~~------~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~  470 (476)
T 2fdv_A          398 KGQF------KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP-RNYTMSFL  470 (476)
T ss_dssp             TSCB------CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC-CCCCEEEE
T ss_pred             CCCC------CCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC-CceEEEEE
Confidence            4211      1346799999999999999999999999999999999999987642 23333 55677777 78999999


Q ss_pred             ecc
Q 009414          532 ARR  534 (535)
Q Consensus       532 ~r~  534 (535)
                      +|+
T Consensus       471 ~R~  473 (476)
T 2fdv_A          471 PRH  473 (476)
T ss_dssp             EC-
T ss_pred             ecc
Confidence            986


No 9  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=5.7e-77  Score=597.82  Aligned_cols=443  Identities=19%  Similarity=0.279  Sum_probs=368.5

Q ss_pred             CCCCCCCCCCCCC-CCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCch
Q 009414           63 SKACSKPIPGPRG-LPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVK  139 (535)
Q Consensus        63 ~~~~~~~~PgP~~-~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~  139 (535)
                      .+.+.+.||||++ +|++||++++.++++.++.++++||  |+||++++|+.++|+|+||+.+++++.+  ..|.+++..
T Consensus         6 lP~g~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kY--G~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~   83 (461)
T 3ld6_A            6 LPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKY--GPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVY   83 (461)
T ss_dssp             ----CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHH--CSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHH
T ss_pred             CccCCCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHh--CCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcch
Confidence            4556778999875 9999999999889999999999999  9999999999999999999999999974  567777766


Q ss_pred             hhhhhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHH
Q 009414          140 ESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMC  219 (535)
Q Consensus       140 ~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~  219 (535)
                      .......+|+++++..+|+.|+++|+.+ .+.|+...++.+.+.+++.++++++.+.+  ++.+|+.+.+..+++++++.
T Consensus        84 ~~~~~~~~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~  160 (461)
T 3ld6_A           84 SRLTTPVFGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASH  160 (461)
T ss_dssp             HHHHHHHHCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHH
T ss_pred             hhhhhccCCCccccCCCcHHHHHHHHhc-cccccHHHHhhhhHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHH
Confidence            6666777888888877999999999999 68999999999999999999999988854  45789999999999999999


Q ss_pred             HHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcC
Q 009414          220 SVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTS  299 (535)
Q Consensus       220 ~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  299 (535)
                      ++||.+++.   ..++....+...+...+..     ....+|.+.   +.....+..++.+.+.+++.+.|++++.+.+ 
T Consensus       161 ~~fG~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~-  228 (461)
T 3ld6_A          161 CLHGKEIRS---QLNEKVAQLYADLDGGFSH-----AAWLLPGWL---PLPSFRRRDRAHREIKDIFYKAIQKRRQSQE-  228 (461)
T ss_dssp             HHTCHHHHH---TCCHHHHHHHHHHHTTSSH-----HHHHSCTTS---CCHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-
T ss_pred             HHcCcchhh---hhhhhhhhhhhhhhhhhhh-----HHHhhhhhc---cCcHHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence            999998866   3333333333333222111     111233322   2334455667788888899988887765432 


Q ss_pred             CCCCCcHHHHHhccCCCC--CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCC-CCCCh
Q 009414          300 LQRNSDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRS-RPLTE  376 (535)
Q Consensus       300 ~~~~~d~l~~ll~~~~~~--~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~-~~~~~  376 (535)
                       ..+ |+++.|++...++  +++++++.+++..+++||+|||+++++|++++|++||++|+++|+|+++++++. ..++.
T Consensus       229 -~~~-d~l~~ll~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~  306 (461)
T 3ld6_A          229 -KID-DILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTY  306 (461)
T ss_dssp             -CCC-SHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCH
T ss_pred             -CCc-chhhhhHHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccchhH
Confidence             334 9999999876443  599999999999999999999999999999999999999999999999999864 56789


Q ss_pred             hhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCC
Q 009414          377 SDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAA  456 (535)
Q Consensus       377 ~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~  456 (535)
                      +++++||||+|||+||||++|+++..  .|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++++..
T Consensus       307 ~~l~~lpyl~avi~E~lRl~p~~~~~--~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~  384 (461)
T 3ld6_A          307 DQLKDLNLLDRCIKETLRLRPPIMIM--MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA  384 (461)
T ss_dssp             HHHHTCHHHHHHHHHHHHHSCSCCCE--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHH
T ss_pred             HHHHHHhhhhheeeeccccCCchhcc--ccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCcc
Confidence            99999999999999999999999987  7999999999999999999999999999999999999999999999986522


Q ss_pred             CccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       457 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                            ...+..|+|||+|+|+|+|++||++|++++++.||++|+|++.+|..... ...+++..| +++.|++++|+
T Consensus       385 ------~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~-~~~~~~~~p-~~~~v~~~~Rs  454 (461)
T 3ld6_A          385 ------SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTV-NYTTMIHTP-ENPVIRYKRRS  454 (461)
T ss_dssp             ------HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCB-CCSSSSCCB-SSCEEEEEECC
T ss_pred             ------cCCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcc-cccceEEcC-CceEEEEEECC
Confidence                  12456799999999999999999999999999999999999988744332 233455545 57789999996


No 10 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=5e-76  Score=593.88  Aligned_cols=449  Identities=20%  Similarity=0.317  Sum_probs=358.1

Q ss_pred             CCCCCCCCCCccccccccC-CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhh
Q 009414           68 KPIPGPRGLPFIGSMSLMT-NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYS  144 (535)
Q Consensus        68 ~~~PgP~~~P~iG~~~~~~-~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~  144 (535)
                      +.||||+++|++||++.+. .+++..+.+++++|  |+||++++|+.++++|+||+.+++|+.+  ..|.+++.......
T Consensus        11 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~y--G~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~   88 (477)
T 1r9o_A           11 KLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVY--GPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAER   88 (477)
T ss_dssp             BCCCCSSSCC-----CCBCHHHHHHHHHHHHHHH--CSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCT
T ss_pred             CCCCCCCCCceeccHhhcCCCChHHHHHHHHHHh--CCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhh
Confidence            4699999999999999884 67889999999999  9999999999999999999999999963  56776554322222


Q ss_pred             hhcccceeeCcCChhHHHHHHHhhhccCCHh--hhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHh
Q 009414          145 LMFNRAIGFAPYGVYWRTLRRIAATHLFCPK--QINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVF  222 (535)
Q Consensus       145 ~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~--~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~f  222 (535)
                      ...|.++++. +|+.|+++|+++ .+.|+..  .++.+.+.+.++++++++.+.+..++++|+.+++..+++|+++.++|
T Consensus        89 ~~~~~~l~~~-~g~~w~~~Rr~~-~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~f  166 (477)
T 1r9o_A           89 ANRGFGIVFS-NGKKWKEIRRFS-LMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIF  166 (477)
T ss_dssp             TTCTTSSTTC-CHHHHHHHHHHH-HHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCceEec-CChHHHHHHHHH-HHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHHc
Confidence            2345666555 899999999998 5778876  45778999999999999999875567899999999999999999999


Q ss_pred             cccccccCCCCchHHHHHHHHHHHHHHhccc--ccccccccc-ccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcC
Q 009414          223 GRKYALLGYSSNTEARRLSRLVEEGYDLLGK--LNFSDHLPW-LADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTS  299 (535)
Q Consensus       223 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~-l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  299 (535)
                      |.+++.   .+ ++...+.+.+...+.....  ..+...+|+ +..+ +. ..++..++.+.+.+++.+.|+++++..+.
T Consensus       167 G~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l-p~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  240 (477)
T 1r9o_A          167 HKRFDY---KD-QQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYF-PG-THNKLLKNVAFMKSYILEKVKEHQESMDM  240 (477)
T ss_dssp             SCCCCT---TC-HHHHHHHHHHHHHHHHHTCCBC-------CCCSCC-TT-CHHHHHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred             cCcCCC---CC-HHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhc-ch-HHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            998865   22 3445555555554432221  122345676 3333 22 22456667788899999999998875433


Q ss_pred             CCCCCcHHHHHhccC------CCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCC
Q 009414          300 LQRNSDFVDVLLSLS------GPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRP  373 (535)
Q Consensus       300 ~~~~~d~l~~ll~~~------~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  373 (535)
                      ++.+ |+++.+++..      .+.+++++++.+++..+++||+|||+++++|++++|++||++|++||+||++++++++.
T Consensus       241 ~~~~-d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~  319 (477)
T 1r9o_A          241 NNPQ-DFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRS  319 (477)
T ss_dssp             TCCC-SHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSC
T ss_pred             CCch-HHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCC
Confidence            2334 9999988532      12359999999999999999999999999999999999999999999999999987788


Q ss_pred             CChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCC
Q 009414          374 LTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNP  453 (535)
Q Consensus       374 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  453 (535)
                      ++++++++||||+|||+|+||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||+++
T Consensus       320 ~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~-~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l~~  398 (477)
T 1r9o_A          320 PCMQDRSHMPYTDAVVHEVQRYIDLLPTSL-PHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDE  398 (477)
T ss_dssp             CCGGGGGGCHHHHHHHHHHHHHHTSSTTCS-CEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCT
T ss_pred             CChHhhccCcHHHHHHHHHHHhcCCCCCCC-ceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccceECC
Confidence            999999999999999999999999999532 8999999999999999999999999999999999999999999999975


Q ss_pred             CCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCC-CCccc-cccccccccCceeEEEE
Q 009414          454 EAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDP-VDLSE-VLRLSCEMKNPLTVRVH  531 (535)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~-~~~~~~~~~~~~~v~~~  531 (535)
                      +...      .....|+|||.|+|+|+|++||++|++++++.||++|++++.++.+ .+... ..+++..| .++.|+++
T Consensus       399 ~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~  471 (477)
T 1r9o_A          399 GGNF------KKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-PFYQLCFI  471 (477)
T ss_dssp             TSCB------CCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-CCCCEEEE
T ss_pred             CCCc------CccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC-CCeEEEEE
Confidence            4111      1346899999999999999999999999999999999999987642 22333 45666677 78999999


Q ss_pred             eccC
Q 009414          532 ARRR  535 (535)
Q Consensus       532 ~r~~  535 (535)
                      +|++
T Consensus       472 ~R~~  475 (477)
T 1r9o_A          472 PIHH  475 (477)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            9963


No 11 
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=5.8e-76  Score=598.12  Aligned_cols=438  Identities=19%  Similarity=0.277  Sum_probs=362.8

Q ss_pred             CCCCCCCCCCCccccccccCC----ChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCchhhh
Q 009414           67 SKPIPGPRGLPFIGSMSLMTN----LPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKESA  142 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~~----~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~  142 (535)
                      .+.||||+++|++||++++..    ..+..+.+|+++|  |++|++++|+.++++|+||+.+++++++..|++++.....
T Consensus        44 ~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~y--G~v~~~~~g~~~~vvv~~p~~~~~il~~~~~~~r~~~~~~  121 (503)
T 3s79_A           44 TSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVY--GEFMRVWISGEETLIISKSSSMFHIMKHNHYSSRFGSKLG  121 (503)
T ss_dssp             -CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHS--CSEEEEESSSSEEEEECCHHHHHHHHHSGGGCCCCCCHHH
T ss_pred             cCCCCCCCCCceeeehhccccccccchhHHHHHHHHHh--CCeEEEEeCCccEEEECCHHHHHHHHhcCCCCCcchhhhh
Confidence            356999999999999988753    4556889999999  9999999999999999999999999987778777654333


Q ss_pred             hhh--hcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHHHH
Q 009414          143 YSL--MFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNNMM  218 (535)
Q Consensus       143 ~~~--~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~vi~  218 (535)
                      ...  ..|.++++..+|+.|+++|+.+ .+.|+...++.+.+.+.++++++++.+.+.  +++.+|+.+++.++++|+++
T Consensus       122 ~~~~~~~~~~~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi~  200 (503)
T 3s79_A          122 LQCIGMHEKGIIFNNNPELWKTTRPFF-MKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTSN  200 (503)
T ss_dssp             HHHHTCTTSSSTTCCCHHHHHHHHHHH-HHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHHH
T ss_pred             hhhhccCCCceeeCCCccHHHHHHHhh-hHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHHH
Confidence            222  2356777777899999999999 588999999999999999999999988763  45689999999999999999


Q ss_pred             HHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 009414          219 CSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQT  298 (535)
Q Consensus       219 ~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  298 (535)
                      .++||.+++.     ++....+.+.++..........+...+|++        .++..+..+.+.+++.+.++++++..+
T Consensus       201 ~~~fG~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~~  267 (503)
T 3s79_A          201 TLFLRIPLDE-----SAIVVKIQGYFDAWQALLIKPDIFFKISWL--------YKKYEKSVKDLKDAIEVLIAEKRRRIS  267 (503)
T ss_dssp             HHHTCCCCCH-----HHHHHHHHHHHHHHHHHTTCCHHHHHSGGG--------THHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCcccCc-----hhHHHHHHHHHHHHHHHhcCcHHHhhcchh--------HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999988743     112233333333222221111111111221        234566778889999999998887654


Q ss_pred             CCC---CCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCC
Q 009414          299 SLQ---RNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLT  375 (535)
Q Consensus       299 ~~~---~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~  375 (535)
                      .++   ...|+++.+++..++++++++++.+++..+++||+|||+++++|++++|++||++|+++|+||+++++ ++.++
T Consensus       268 ~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~-~~~~~  346 (503)
T 3s79_A          268 TEEKLEECMDFATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIK  346 (503)
T ss_dssp             TCTTTTTTCCHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT-TSCCC
T ss_pred             cccccchHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-CCCCC
Confidence            321   22399999998766667999999999999999999999999999999999999999999999999998 67899


Q ss_pred             hhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCC
Q 009414          376 ESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEA  455 (535)
Q Consensus       376 ~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~  455 (535)
                      ++++++||||+|||+|+||++|+++..  .|.+.+|++++||.||||+.|.++.+++|+| ++|+||++|+||||++.. 
T Consensus       347 ~~~~~~lpyl~avi~E~lRl~p~~~~~--~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~~~~-  422 (503)
T 3s79_A          347 IDDIQKLKVMENFIYESMRYQPVVDLV--MRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKNV-  422 (503)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHSCSSCCE--EEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGSSCC-
T ss_pred             HHHHhcCHHHHHHHHhhhccCCCcccc--cccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcCCCC-
Confidence            999999999999999999999999987  7999999999999999999999999999999 999999999999998643 


Q ss_pred             CCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCC-CccccccccccccCc---eeEEEE
Q 009414          456 ADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPV-DLSEVLRLSCEMKNP---LTVRVH  531 (535)
Q Consensus       456 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~---~~v~~~  531 (535)
                               ....|+|||+|+|+|+|++||++|++++++.|+++|+|++.+|.+. +.....+++..|+++   ++|+++
T Consensus       423 ---------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~  493 (503)
T 3s79_A          423 ---------PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFT  493 (503)
T ss_dssp             ---------CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEEEE
T ss_pred             ---------CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeEEec
Confidence                     3457999999999999999999999999999999999999887543 445566788888775   999999


Q ss_pred             ecc
Q 009414          532 ARR  534 (535)
Q Consensus       532 ~r~  534 (535)
                      +|.
T Consensus       494 ~R~  496 (503)
T 3s79_A          494 PRN  496 (503)
T ss_dssp             ECC
T ss_pred             cCC
Confidence            996


No 12 
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=3.9e-76  Score=594.18  Aligned_cols=449  Identities=23%  Similarity=0.389  Sum_probs=364.7

Q ss_pred             CCCCCCCCCCcccccccc-CCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhh
Q 009414           68 KPIPGPRGLPFIGSMSLM-TNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYS  144 (535)
Q Consensus        68 ~~~PgP~~~P~iG~~~~~-~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~  144 (535)
                      +.||||+++|++||++.+ .++++..+.+++++|  |++|++++|+.++++|+||+.+++|+.+  ..|.+++.......
T Consensus        10 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~y--G~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~   87 (476)
T 1po5_A           10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKY--GDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDP   87 (476)
T ss_dssp             CCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHH--CSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCS
T ss_pred             CCCcCCCCCCccccHHhccCCcHHHHHHHHHHHh--CCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHh
Confidence            469999999999999998 578999999999999  9999999999999999999999999963  56776654332222


Q ss_pred             hhcccceeeCcCChhHHHHHHHhhhccCCHh--hhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHh
Q 009414          145 LMFNRAIGFAPYGVYWRTLRRIAATHLFCPK--QINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVF  222 (535)
Q Consensus       145 ~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~--~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~f  222 (535)
                      ...|.+++++ +|+.|+++|+++ .+.|++.  .++.+.+.+.++++++++.+.+..++++|+.+++..+++|+++.++|
T Consensus        88 ~~~~~~l~~~-~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~f  165 (476)
T 1po5_A           88 IFQGYGVIFA-NGERWRALRRFS-LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVF  165 (476)
T ss_dssp             CCSSCCCCCS-SHHHHHHHHHHH-HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCceEec-CCcHHHHHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHHHc
Confidence            2345676655 999999999998 5778776  45778999999999999999876567899999999999999999999


Q ss_pred             cccccccCCCCchHHHHHHHHHHHHHHhcccc--cccccccc-ccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcC
Q 009414          223 GRKYALLGYSSNTEARRLSRLVEEGYDLLGKL--NFSDHLPW-LADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTS  299 (535)
Q Consensus       223 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  299 (535)
                      |.+++.   . +++...+.+.+..........  .....+|+ +.+++ . ..++..+..+.+.+++.+.|+++++..+.
T Consensus       166 G~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp-~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  239 (476)
T 1po5_A          166 GKRFDY---K-DPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP-G-THRQIYRNLQEINTFIGQSVEKHRATLDP  239 (476)
T ss_dssp             SSCCCT---T-CHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSS-C-SHHHHHHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred             CCCCCC---C-CHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcC-c-HHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            998865   2 234444544444443221111  12234565 33332 1 12456667788899999999988765433


Q ss_pred             CCCCCcHHHHHhccCC------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCC
Q 009414          300 LQRNSDFVDVLLSLSG------PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRP  373 (535)
Q Consensus       300 ~~~~~d~l~~ll~~~~------~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  373 (535)
                      ++.+ |+++.|++...      +.+++++++.+++..+++||+|||+++++|++++|++||++|++||+||++++++++.
T Consensus       240 ~~~~-d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~  318 (476)
T 1po5_A          240 SNPR-DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP  318 (476)
T ss_dssp             TSCC-SHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSC
T ss_pred             CCcc-cHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCC
Confidence            2334 99999885321      2348899999999999999999999999999999999999999999999999987778


Q ss_pred             CChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCC
Q 009414          374 LTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNP  453 (535)
Q Consensus       374 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  453 (535)
                      ++++++++||||+|||+|+||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||+++
T Consensus       319 ~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l~~  397 (476)
T 1po5_A          319 PALDDRAKMPYTDAVIHEIQRLGDLIPFGV-PHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDA  397 (476)
T ss_dssp             CCGGGGGGCHHHHHHHHHHHHHHCSSTTCC-CEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCT
T ss_pred             CChHHHhcCcHHHHHHHHHHHhccCCCCCC-ccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhhCCC
Confidence            999999999999999999999999999522 8999999999999999999999999999999999999999999999975


Q ss_pred             CCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCC-CCccc-cccccccccCceeEEEE
Q 009414          454 EAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDP-VDLSE-VLRLSCEMKNPLTVRVH  531 (535)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~-~~~~~~~~~~~~~v~~~  531 (535)
                      +...      .....|+|||.|+|+|+|++||++|++++++.||++|++++.++.+ .+... ..+++..| .++.|+++
T Consensus       398 ~~~~------~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~  470 (476)
T 1po5_A          398 NGAL------KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-PSYQIRFL  470 (476)
T ss_dssp             TSCB------CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC-CCCCBEEE
T ss_pred             CCCc------cCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC-cceEEEEE
Confidence            4211      1346799999999999999999999999999999999999987642 22333 55677777 78999999


Q ss_pred             eccC
Q 009414          532 ARRR  535 (535)
Q Consensus       532 ~r~~  535 (535)
                      +|+.
T Consensus       471 ~R~~  474 (476)
T 1po5_A          471 ARHH  474 (476)
T ss_dssp             ECC-
T ss_pred             ecCC
Confidence            9863


No 13 
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=1.7e-76  Score=599.32  Aligned_cols=445  Identities=23%  Similarity=0.393  Sum_probs=351.9

Q ss_pred             CCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC---CCCCCCCchhhhhhhh
Q 009414           70 IPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS---SVFADRPVKESAYSLM  146 (535)
Q Consensus        70 ~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~---~~~~~~~~~~~~~~~~  146 (535)
                      ||||+++|++||++.+..+++.++.+|+++|  |++|++++|+.++|+|+||+.+++|+.+   ..|..++......  .
T Consensus        16 ~PGP~~~PliGn~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~--~   91 (485)
T 3nxu_A           16 IPGPTPLPFLGNILSYHKGFCMFDMECHKKY--GKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG--F   91 (485)
T ss_dssp             CCCCCCBTTTBTGGGGGGCHHHHHHHHHHHH--CSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCG--G
T ss_pred             CCCCCCcCeecCcHHhhcChHHHHHHHHHHc--CCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccc--c
Confidence            9999999999999999888999999999999  9999999999999999999999999974   3455555433221  3


Q ss_pred             cccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHHHHHHHhcc
Q 009414          147 FNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNNMMCSVFGR  224 (535)
Q Consensus       147 ~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~vi~~~~fG~  224 (535)
                      .+.++++ .+|+.|+++|+++ .+.|++++++.+.+.+++.++++++.+.+.  +++++|+.+++..+++|+++.++||.
T Consensus        92 ~~~~l~~-~~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~fG~  169 (485)
T 3nxu_A           92 MKSAISI-AEDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGV  169 (485)
T ss_dssp             GGGSTTT-CCHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHHSC
T ss_pred             cccCccc-cCCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHcCC
Confidence            3455544 4899999999999 689999999999999999999999999754  56789999999999999999999999


Q ss_pred             cccccCCCCchHHHHHHHHHHHHHHhccc---cccccccccccccch-hHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCC
Q 009414          225 KYALLGYSSNTEARRLSRLVEEGYDLLGK---LNFSDHLPWLADFDL-QKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSL  300 (535)
Q Consensus       225 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~P~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  300 (535)
                      +++.+....+    .+.+.+.........   ......+|++.++.. ...........+.+.+.+.+.++++.+.. . 
T Consensus       170 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-  243 (485)
T 3nxu_A          170 NIDSLNNPQD----PFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT-Q-  243 (485)
T ss_dssp             CCCGGGCTTC----HHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred             ccccccCCCc----HHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhcc-C-
Confidence            9987543332    222222221111000   011123343321100 00000001222334444444444443221 1 


Q ss_pred             CCCCcHHHHHhccCC------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCC
Q 009414          301 QRNSDFVDVLLSLSG------PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPL  374 (535)
Q Consensus       301 ~~~~d~l~~ll~~~~------~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  374 (535)
                      +...|+++.+++...      ...++++++.+++..+++||+|||+++++|++++|++||++|++||+|++++++++..+
T Consensus       244 ~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  323 (485)
T 3nxu_A          244 KHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP  323 (485)
T ss_dssp             --CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTCCC
T ss_pred             CCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCCCC
Confidence            233499999997543      23589999999999999999999999999999999999999999999999999888889


Q ss_pred             ChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCC
Q 009414          375 TESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPE  454 (535)
Q Consensus       375 ~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~  454 (535)
                      +++++++||||+|||+|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++++
T Consensus       324 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~~  401 (485)
T 3nxu_A          324 TYDTVLQMEYLDMVVNETLRLFPIAMRL--ERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN  401 (485)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHSCSCSCE--EEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHHH
T ss_pred             CHHHHhcChHHHHHHHHHHhcCCCccCc--ceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccCCCc
Confidence            9999999999999999999999999986  89999999999999999999999999999999999999999999999643


Q ss_pred             CCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          455 AADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       455 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      ..      ...+..|+|||.|+|+|+|++||++|++++++.|+++|++++.++.+.++....+.+..|++++.|++++|+
T Consensus       402 ~~------~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  475 (485)
T 3nxu_A          402 KD------NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRD  475 (485)
T ss_dssp             HT------TSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSCCEEEEEEC-
T ss_pred             cc------cCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCCeEEEEEEcc
Confidence            11      124567999999999999999999999999999999999999876554555555677889899999999996


No 14 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=2.1e-76  Score=600.26  Aligned_cols=439  Identities=21%  Similarity=0.341  Sum_probs=363.3

Q ss_pred             CCCCCCCCCCCCCcccccccc-CCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhh
Q 009414           65 ACSKPIPGPRGLPFIGSMSLM-TNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKES  141 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~-~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~  141 (535)
                      +..+.||||++      ++++ .++++..+.+++++|  |+||++++|+.++++|+||+.+++|+.+  ..|++++....
T Consensus        26 ~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~y--G~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~   97 (496)
T 3qz1_A           26 RNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKL--GPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPS   97 (496)
T ss_dssp             ---CCCCBCSC------SCTTSSSCHHHHHHHGGGTS--CSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTT
T ss_pred             cCCCCCcCCcc------ccccCCCcchHHHHHHHHHh--CCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcch
Confidence            34678999987      4444 478999999999999  9999999999999999999999999974  56888876655


Q ss_pred             hhhhhccc-ceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHH
Q 009414          142 AYSLMFNR-AIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCS  220 (535)
Q Consensus       142 ~~~~~~g~-~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~  220 (535)
                      ......|. ++++..+|+.|+++||++ .+.|+.+.++.+.+.++++++++++.+.+.+++++|+.+++..+++|+++.+
T Consensus        98 ~~~~~~~~~~l~~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~  176 (496)
T 3qz1_A           98 YKLVSQRCQDISLGDYSLLWKAHKKLT-RSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYL  176 (496)
T ss_dssp             TTTSCTTCCCSSSSCCSHHHHHHHHHH-HHHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHHTTTT
T ss_pred             HHHhcCCCCceEECCCCHHHHHHHHHH-HHHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHH
Confidence            44444454 776664499999999999 6788877788899999999999999998766778999999999999999999


Q ss_pred             HhcccccccCCCCchHHHHHHHHHHHHHHhccc--cccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 009414          221 VFGRKYALLGYSSNTEARRLSRLVEEGYDLLGK--LNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQT  298 (535)
Q Consensus       221 ~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  298 (535)
                      +||.   .    +++....+.+.+.........  ....+.+|++.+++ ....++..+..+.+.+++.+.++++++..+
T Consensus       177 ~fG~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  248 (496)
T 3qz1_A          177 TFGN---K----EDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFP-NPGLWRLKQAIENRDHMVEKQLRRHKESMV  248 (496)
T ss_dssp             STTC---C----CHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             hcCC---C----CChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9998   1    223455555555555443333  33456778887774 345567788889999999999999988765


Q ss_pred             CCCCCCcHHHHHhccCCCC-------CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcC-
Q 009414          299 SLQRNSDFVDVLLSLSGPD-------RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGR-  370 (535)
Q Consensus       299 ~~~~~~d~l~~ll~~~~~~-------~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~-  370 (535)
                      .+..+ |+++.|++...+.       +++++++.+++..+++||+|||+++++|++++|++||++|+++|+|+++++++ 
T Consensus       249 ~~~~~-d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~  327 (496)
T 3qz1_A          249 AGQWR-DMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPG  327 (496)
T ss_dssp             SSCCS-SSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSS
T ss_pred             CCCcc-chHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence            54444 9999999875432       68999999999999999999999999999999999999999999999999986 


Q ss_pred             ---CCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCC
Q 009414          371 ---SRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMP  447 (535)
Q Consensus       371 ---~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  447 (535)
                         ++.+ ++++++||||+|||+|+||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|
T Consensus       328 ~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P  405 (496)
T 3qz1_A          328 ASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLAL-PHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRP  405 (496)
T ss_dssp             SSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCC-CEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSCCC
T ss_pred             cccCCCC-hhhhhcCcHHHHHHHHHHHhcCCccccc-CccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccCCc
Confidence               4566 9999999999999999999999999743 7999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCC-CCCcccc--ccccccccC
Q 009414          448 ERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYD-PVDLSEV--LRLSCEMKN  524 (535)
Q Consensus       448 ~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~--~~~~~~~~~  524 (535)
                      |||++++          ....++|||.|+|+|+|++||++|++++++.|+++|++++.+++ +.++...  .+++..| .
T Consensus       406 eR~l~~~----------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~  474 (496)
T 3qz1_A          406 DRFLEPG----------ANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKV-Q  474 (496)
T ss_dssp             CCCC-------------CCCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCC-C
T ss_pred             ccccCCC----------CCcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecC-C
Confidence            9999754          12379999999999999999999999999999999999988643 2334333  5677777 5


Q ss_pred             ceeEEEEecc
Q 009414          525 PLTVRVHARR  534 (535)
Q Consensus       525 ~~~v~~~~r~  534 (535)
                      ++.|++++|+
T Consensus       475 ~~~v~~~~R~  484 (496)
T 3qz1_A          475 PFQVRLQPRG  484 (496)
T ss_dssp             CCCCCCCCC-
T ss_pred             ceEEEEEEec
Confidence            9999999986


No 15 
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=1.4e-74  Score=585.62  Aligned_cols=451  Identities=19%  Similarity=0.254  Sum_probs=364.6

Q ss_pred             CCCCCCCCCCCCCCCccccccccC-----CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC-CCCCCC
Q 009414           63 SKACSKPIPGPRGLPFIGSMSLMT-----NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS-SVFADR  136 (535)
Q Consensus        63 ~~~~~~~~PgP~~~P~iG~~~~~~-----~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~  136 (535)
                      ..++++.+|||++.|+. +++.+.     ..++..+.++++||  |+||++++|+.++|+|+||+.+++|+++ ..|+++
T Consensus         4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kY--G~i~~~~~g~~~~vvv~dp~~~~~il~~~~~f~~r   80 (487)
T 3n9y_A            4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKY--GPIYREKLGNVESVYVIDPEDVALLFKSEGPNPER   80 (487)
T ss_dssp             CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHH--CSEEEEEETTEEEEEECCHHHHHHHHHTCCSSCCC
T ss_pred             CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHc--CceeeccCCCCCEEEEcCHHHHHHHHHhCCCCCCC
Confidence            34678889999988876 655541     36888999999999  9999999999999999999999999985 567777


Q ss_pred             Cchhhhh--hhh--cccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh------CCCceeHH
Q 009414          137 PVKESAY--SLM--FNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY------GGSAFRLR  206 (535)
Q Consensus       137 ~~~~~~~--~~~--~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~------~~~~vdl~  206 (535)
                      +......  ...  .+.+++ ..+|+.|+++|+.+...+|+.+.++.+.+.++++++++++.+.+.      +++++|+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~l~-~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~  159 (487)
T 3n9y_A           81 FLIPPWVAYHQYYQRPIGVL-LKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDIS  159 (487)
T ss_dssp             CCCHHHHHHHHHTTCCCCGG-GCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCH
T ss_pred             CCCcHHHHHHHHccccCCCc-cCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHH
Confidence            6554321  111  245554 459999999999994336999999999999999999999999763      24579999


Q ss_pred             HHHHHHHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhcccccccccccc-ccccchhHHHHHHHHhhHHHHHH
Q 009414          207 DILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPW-LADFDLQKVRLRSSKLVPQVNRF  285 (535)
Q Consensus       207 ~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~~l~~~~~~~~~~~~~~~~~~~  285 (535)
                      +++.++++|+++.++||.+++.++...+.....+.+.+...+.....   ...+|. +..+.+....+...+..+.+.++
T Consensus       160 ~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~  236 (487)
T 3n9y_A          160 DDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLFRTKTWKDHVAAWDVIFSK  236 (487)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhcccHHHHHHHHHHHHHHHH
Confidence            99999999999999999999876555445556666666655543322   223332 22111233344444555566666


Q ss_pred             HHHHHHHHHHhh----cCCCCCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHH
Q 009414          286 VNRIIQEHRTTQ----TSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVH  361 (535)
Q Consensus       286 ~~~~i~~~~~~~----~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr  361 (535)
                      +.+.++++.+..    ..+....|+++.+++.   ++++++++.+++..+++||+|||+++++|++|+|++||++|++++
T Consensus       237 ~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~---~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~  313 (487)
T 3n9y_A          237 ADIYTQNFYWELRQKGSVHHDYRGILYRLLGD---SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLR  313 (487)
T ss_dssp             HHHHHHHHHHHHHHHCCCCSSCCCHHHHHHHS---CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCcccchHHHHHHHHhc---CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHH
Confidence            777776554432    1112234899999874   358999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCC
Q 009414          362 SELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYAD  441 (535)
Q Consensus       362 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~  441 (535)
                      +||++++++...++++++++||||+|||+|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+|
T Consensus       314 ~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~--~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~d  391 (487)
T 3n9y_A          314 AEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTL--QRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFD  391 (487)
T ss_dssp             HHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSEE--EEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSS
T ss_pred             HHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCccccc--ceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCC
Confidence            99999998777777999999999999999999999999876  8999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCcccccccccc
Q 009414          442 PLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCE  521 (535)
Q Consensus       442 p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  521 (535)
                      |++|+||||++++..       .....|+|||.|+|+|+|++||++|++++++.|+++|+|++.++.  ++....+++..
T Consensus       392 p~~F~PeR~l~~~~~-------~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~  462 (487)
T 3n9y_A          392 PENFDPTRWLSKDKN-------ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLS--DVGTTFNLILM  462 (487)
T ss_dssp             TTSCCGGGGTCSCTT-------SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCC--CCCEEESSSEE
T ss_pred             cccCChhhcCCCCCC-------CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCc--ccccceeeeec
Confidence            999999999975421       135679999999999999999999999999999999999998753  34445567889


Q ss_pred             ccCceeEEEEecc
Q 009414          522 MKNPLTVRVHARR  534 (535)
Q Consensus       522 ~~~~~~v~~~~r~  534 (535)
                      |++++.|++++|+
T Consensus       463 p~~~~~~~~~~r~  475 (487)
T 3n9y_A          463 PEKPISFTFWPFN  475 (487)
T ss_dssp             ESSCCCEEEEEC-
T ss_pred             CCCCceeEEEECC
Confidence            9999999999996


No 16 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=2.7e-73  Score=569.53  Aligned_cols=439  Identities=19%  Similarity=0.311  Sum_probs=340.0

Q ss_pred             CCCCC-CCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhhhh
Q 009414           68 KPIPG-PRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESAYS  144 (535)
Q Consensus        68 ~~~Pg-P~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~~~  144 (535)
                      +.||| |+++|++||++.+..+++.++.+++++|  |++|++++|+.++++|+||+.+++|+.+  ..|++++... ...
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~y--G~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~-~~~   80 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDEL--GDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYP-FMT   80 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHH--CSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCG-GGH
T ss_pred             CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHc--CCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchh-HHH
Confidence            46898 8889999999999888999999999999  9999999999999999999999999974  4667666542 223


Q ss_pred             hhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHhcc
Q 009414          145 LMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGR  224 (535)
Q Consensus       145 ~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~  224 (535)
                      ..+|.++. . +|+.|+++|+.+ .+.|+++.++.+.+.+.++++++++.+.+  ++.+|+.+++..+++++++.++||.
T Consensus        81 ~~~g~~~~-~-~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~~~~--~~~vd~~~~~~~~~~~vi~~~~fG~  155 (455)
T 2cib_A           81 PIFGEGVV-F-DASPERRKEMLH-NAALRGEQMKGHAATIEDQVRRMIADWGE--AGEIDLLDFFAELTIYTSSACLIGK  155 (455)
T ss_dssp             HHHC-----------------------CCHHHHHHHHHHHHHHHHHHHTTCCS--EEEEEHHHHHHHHHHHHHHHHHTCH
T ss_pred             hhcCCccc-c-CcHHHHHHHhhh-ccccCHHHHHHHHHHHHHHHHHHHHHhCC--CCcEeHHHHHHHHHHHHHHHHHcCC
Confidence            34455543 3 789999999999 78999999999999999999999998743  4579999999999999999999999


Q ss_pred             cccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCC
Q 009414          225 KYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNS  304 (535)
Q Consensus       225 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  304 (535)
                      +++.   ..++   ++.+.+..+....  .....++||+.    ....++..++.+.+.+++.+.|++++++......+.
T Consensus       156 ~~~~---~~~~---~~~~~~~~~~~~~--~~~~~~~p~l~----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~  223 (455)
T 2cib_A          156 KFRD---QLDG---RFAKLYHELERGT--DPLAYVDPYLP----IESFRRRDEARNGLVALVADIMNGRIANPPTDKSDR  223 (455)
T ss_dssp             HHHT---TCCH---HHHHHHHHHHTTC--CGGGGTCTTCS----CHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CC
T ss_pred             Ccch---hhhH---HHHHHHHHHHhhh--hHHHHhcccCC----ChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcc
Confidence            9865   2222   3333333332211  11223455431    223345566778889999999998886543211123


Q ss_pred             cHHHHHhccCCCC--C-CCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccC
Q 009414          305 DFVDVLLSLSGPD--R-LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQS  381 (535)
Q Consensus       305 d~l~~ll~~~~~~--~-l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~  381 (535)
                      |+++.|++...++  . ++++++.+++..+++||+|||+++++|++++|++||++|++||+||+++++++..++++++++
T Consensus       224 dll~~ll~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~  303 (455)
T 2cib_A          224 DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQ  303 (455)
T ss_dssp             CHHHHHHHCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHHHTTSC
T ss_pred             cHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhc
Confidence            9999999875332  3 899999999999999999999999999999999999999999999999998767889999999


Q ss_pred             CCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCcccc
Q 009414          382 MVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDIS  461 (535)
Q Consensus       382 lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~  461 (535)
                      ||||+|||+|+||++|+++..  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++++...    
T Consensus       304 lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~----  377 (455)
T 2cib_A          304 IPQLENVLKETLRLHPPLIIL--MRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQED----  377 (455)
T ss_dssp             CHHHHHHHHHHHHHSCSCCCE--EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHH----
T ss_pred             CHHHHHHHHHHHhcCCccccc--ceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCccc----
Confidence            999999999999999999876  89999999999999999999999999999999999999999999999654111    


Q ss_pred             ccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCcc-ccccccccccCceeEEEEecc
Q 009414          462 LMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLS-EVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       462 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r~  534 (535)
                       ...+..|+|||.|+|+|+|++||++|++++++.||++|++++... +.++. ...+++..|++++.|++++|.
T Consensus       378 -~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~p~~~~~v~~~~R~  449 (455)
T 2cib_A          378 -LLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP-PESYRNDHSKMVVQLAQPAAVRYRRRT  449 (455)
T ss_dssp             -HHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSC-GGGCCEECSSSSCEECSCCEEEEEEC-
T ss_pred             -ccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCC-ccccccccccccccCCCCceEEEEECc
Confidence             012467999999999999999999999999999999999998732 22231 123456677789999999985


No 17 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=1e-72  Score=567.34  Aligned_cols=440  Identities=18%  Similarity=0.290  Sum_probs=355.0

Q ss_pred             CCCCCCCCCCccccccccC-CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCchhhh--hh
Q 009414           68 KPIPGPRGLPFIGSMSLMT-NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKESA--YS  144 (535)
Q Consensus        68 ~~~PgP~~~P~iG~~~~~~-~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~--~~  144 (535)
                      +.||||+++|++||++.+. ++++..+.+++++|  |+||++++|+.++++|+||+.+++|+.+..|.+... ...  ..
T Consensus         3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~y--G~v~~~~~~~~~~v~v~~~~~~~~il~~~~f~~~~~-~~~~~~~   79 (470)
T 2ij2_A            3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADEL--GEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLS-QALKFVR   79 (470)
T ss_dssp             CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHH--CSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCC-HHHHHHH
T ss_pred             CCCCCCCCCCccccHHHHhcccchHHHHHHHHHh--CCeEEEecCCccEEEECCHHHHHHHHhhcCcCcCch-hHHHHHH
Confidence            4599999999999999886 57888999999999  999999999999999999999999997655543222 111  11


Q ss_pred             hhcccceeeC-cCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh-CCCceeHHHHHHHHHHHHHHHHHh
Q 009414          145 LMFNRAIGFA-PYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY-GGSAFRLRDILKPASLNNMMCSVF  222 (535)
Q Consensus       145 ~~~g~~~~~~-~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~-~~~~vdl~~~~~~~~~~vi~~~~f  222 (535)
                      ...+.++++. .+|+.|+++||.+ .+.|++..++.+.+.+.++++++++.+.+. +++.+|+.+++..+++|+++.++|
T Consensus        80 ~~~~~~l~~~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~f  158 (470)
T 2ij2_A           80 DFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGF  158 (470)
T ss_dssp             HHHTTSGGGSCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCceEEcCCCchHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHHc
Confidence            2235666554 5899999999999 689999999999999999999999999764 356899999999999999999999


Q ss_pred             cccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCC
Q 009414          223 GRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQR  302 (535)
Q Consensus       223 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  302 (535)
                      |.+++.+...+   ...+...+...+.......  ...|++.++ +....++..+..+.+.+++.+.|++++++..  ..
T Consensus       159 G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--~~  230 (470)
T 2ij2_A          159 NYRFNSFYRDQ---PHPFITSMVRALDEAMNKL--QRANPDDPA-YDENKRQFQEDIKVMNDLVDKIIADRKASGE--QS  230 (470)
T ss_dssp             SCCCCGGGCSS---CCHHHHHHHHHHHHHHHTC-----CTTSGG-GHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CC
T ss_pred             CCcccccccCC---CCHHHHHHHHHHHHHHHHH--hhhhhHhhc-cchHHHHHHHHHHHHHHHHHHHHHHHHhccc--Cc
Confidence            99987642111   1122233333222111110  011334333 2334455667778889999999998876532  33


Q ss_pred             CCcHHHHHhccCC---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhc
Q 009414          303 NSDFVDVLLSLSG---PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDL  379 (535)
Q Consensus       303 ~~d~l~~ll~~~~---~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l  379 (535)
                      + |+++.|++..+   +.+++++++.+++..+++||+|||+++++|++++|++||++|++||+|+++++++ ..++++++
T Consensus       231 ~-dll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~~~~~  308 (470)
T 2ij2_A          231 D-DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD-PVPSYKQV  308 (470)
T ss_dssp             S-SHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS-SSCCHHHH
T ss_pred             h-hHHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC-CCCCHHHH
Confidence            4 99999998653   2359999999999999999999999999999999999999999999999999885 56999999


Q ss_pred             cCCCchhHHHHhhhcCCCCCCcccccccccccceecC-eeeCCCCEEEEehhhhhcCCCCC-CCCCCCCCCccCCCCCCC
Q 009414          380 QSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDH-YHVPAGTTAMVNIWAIMRDPEIY-ADPLKFMPERFVNPEAAD  457 (535)
Q Consensus       380 ~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g-~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~  457 (535)
                      ++||||+|||+|+||++|+++..  .|.+.+|++++| |.||||+.|.++.+++||||++| +||++|+|||| ++. . 
T Consensus       309 ~~lpyl~a~i~E~lRl~p~~~~~--~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~~-~-  383 (470)
T 2ij2_A          309 KQLKYVGMVLNEALRLWPTAPAF--SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-ENP-S-  383 (470)
T ss_dssp             HTCHHHHHHHHHHHHHSCSSCEE--EEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SSG-G-
T ss_pred             hCCHHHHHHHHHHHhcCCCcccc--ceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CCC-C-
Confidence            99999999999999999999986  799999999999 99999999999999999999999 99999999999 211 0 


Q ss_pred             ccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          458 MDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       458 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                           ......|+|||.|+|+|+|++||++|++++++.||++|+++ .+ ...++....+++..|+ +++|++++|.
T Consensus       384 -----~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~-~~~~~~~~~~~~~~p~-~~~v~~~~R~  452 (470)
T 2ij2_A          384 -----AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DH-TNYELDIKETLTLKPE-GFVVKAKSKK  452 (470)
T ss_dssp             -----GSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CT-TCCCCCEEESSSEEET-TCEEEEEECC
T ss_pred             -----cCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eC-CCCccccccceEecCC-CeEEEEEEcc
Confidence                 11346799999999999999999999999999999999999 32 1233444456677786 9999999985


No 18 
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=1.4e-72  Score=562.60  Aligned_cols=430  Identities=22%  Similarity=0.308  Sum_probs=349.5

Q ss_pred             CCCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCC--CCCCCCchhhhh
Q 009414           66 CSKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSS--VFADRPVKESAY  143 (535)
Q Consensus        66 ~~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~--~~~~~~~~~~~~  143 (535)
                      +.+.||||+++|++||++.+..+++ ++.+++++|  |++|++++++.+.++|+||+.+++|+.+.  .|..+  .....
T Consensus        10 ~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~y--g~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~--~~~~~   84 (444)
T 2ve3_A           10 SLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQF--GPIFKTRLFGKNVIFISGALANRFLFTKEQETFQAT--WPLST   84 (444)
T ss_dssp             CCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHH--CSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEE--CCHHH
T ss_pred             CCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHc--CCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccc--hhHHH
Confidence            3567999999999999988866667 888999999  89999999888899999999999999853  34422  11222


Q ss_pred             hhhccc-ceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHh
Q 009414          144 SLMFNR-AIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVF  222 (535)
Q Consensus       144 ~~~~g~-~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~f  222 (535)
                      ...+|. ++++ .+|+.|+++|+.+ .+.|++++++.+.+.++++++++++.|.+  ++++|+.+++..+++|+++.++|
T Consensus        85 ~~~~g~~~l~~-~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~vi~~~~f  160 (444)
T 2ve3_A           85 RILLGPNALAT-QMGEIHRSRRKIL-YQAFLPRTLDSYLPKMDGIVQGYLEQWGK--ANEVIWYPQLRRMTFDVAATLFM  160 (444)
T ss_dssp             HHHHCTTSGGG-CCHHHHHHHHHHH-HGGGCHHHHHTTHHHHHHHHHHHHHHHHH--SSEEEHHHHHHHHHHHHHHHHHT
T ss_pred             HHHhCcccccc-CCchHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhcC--CCcEeHHHHHHHHHHHHHHHHHc
Confidence            233454 6655 4899999999999 68999999999999999999999999964  56899999999999999999999


Q ss_pred             cccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCC
Q 009414          223 GRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQR  302 (535)
Q Consensus       223 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  302 (535)
                      | ....   .+    .++.+.+..........  ...+|.       ...++..++.+.+.+++.+.|++++++.   ..
T Consensus       161 G-~~~~---~~----~~~~~~~~~~~~~~~~~--~~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~~---~~  220 (444)
T 2ve3_A          161 G-EKVS---QN----PQLFPWFETYIQGLFSL--PIPLPN-------TLFGKSQRARALLLAELEKIIKARQQQP---PS  220 (444)
T ss_dssp             C-HHHH---SC----TTHHHHHHHHHHHHSSC--CCCSTT-------SHHHHHHHHHHHHHHHHHHHHHHHHTSC---CC
T ss_pred             C-CCcc---cH----HHHHHHHHHHHHHHhcC--CccCCC-------cHHHHHHHHHHHHHHHHHHHHHHHhcCC---CC
Confidence            9 3322   11    12222222222221111  111221       1224556677888899999998887642   23


Q ss_pred             CCcHHHHHhccCCC--CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhcc
Q 009414          303 NSDFVDVLLSLSGP--DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQ  380 (535)
Q Consensus       303 ~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~  380 (535)
                      ..|+++.|++..++  .+++++++.+++..+++||+|||+++++|++++|++||++|++||+|++.++++. .+++++++
T Consensus       221 ~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~l~  299 (444)
T 2ve3_A          221 EEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ-ELTAETLK  299 (444)
T ss_dssp             CSSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS-CCCHHHHT
T ss_pred             ccCHHHHHHhccccCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC-CCChhhhh
Confidence            34999999986533  3589999999999999999999999999999999999999999999999998754 89999999


Q ss_pred             CCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccc
Q 009414          381 SMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDI  460 (535)
Q Consensus       381 ~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~  460 (535)
                      +||||+|||+|+||++|+++..  .|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++++...   
T Consensus       300 ~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~---  374 (444)
T 2ve3_A          300 KMPYLDQVLQEVLRLIPPVGGG--FRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSAT---  374 (444)
T ss_dssp             TCHHHHHHHHHHHHHSCSSCEE--EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTT---
T ss_pred             cChHHHHHHHHHHhcCCCccCc--cceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCccc---
Confidence            9999999999999999999976  79999999999999999999999999999999999999999999999754211   


Q ss_pred             cccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          461 SLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       461 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                        ...+..|+|||.|+|+|+|++||++|++++++.|+++|++++.++.+.+  .....+..|+++++|++++|+
T Consensus       375 --~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~l~v~~~~r~  444 (444)
T 2ve3_A          375 --HNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLE--LVVTPSPRPKDNLRVKLHSLM  444 (444)
T ss_dssp             --TSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCCCC--EEESSSEEETTCCEEEEEEC-
T ss_pred             --CCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCCcc--eeccccccCCCCceEEEEeCC
Confidence              1134569999999999999999999999999999999999998764433  334456788899999999984


No 19 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=2.3e-72  Score=563.70  Aligned_cols=437  Identities=18%  Similarity=0.269  Sum_probs=365.0

Q ss_pred             CCCCCCCCC-CCccccccccCCChhHHHHHHHHHhcCc-ceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchhhh
Q 009414           67 SKPIPGPRG-LPFIGSMSLMTNLPHHNLAAAAEAYKAK-RVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKESA  142 (535)
Q Consensus        67 ~~~~PgP~~-~P~iG~~~~~~~~~~~~l~~~~~ky~~G-~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~~~  142 (535)
                      .+.||||++ +|++||++.+..+++.++.+++++|  | ++|++++|+.++++|+||+.+++++.+  ..|.+++... .
T Consensus         2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~y--G~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~-~   78 (450)
T 3gw9_A            2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQL--KSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYS-F   78 (450)
T ss_dssp             CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHH--TCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGG-G
T ss_pred             CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHh--CCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHH-H
Confidence            456999665 9999999999888999999999999  7 999999999999999999999999984  4566665443 3


Q ss_pred             hhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHH-HHHhhCCCceeHHHHHHHHHHHHHHHHH
Q 009414          143 YSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVS-MIASYGGSAFRLRDILKPASLNNMMCSV  221 (535)
Q Consensus       143 ~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~-~l~~~~~~~vdl~~~~~~~~~~vi~~~~  221 (535)
                      ....+|.++++..+|+.|+++|+.+ .+.|+.+.++.+.+.+.++++++++ .+.+ .++.+|+.+++..+++++++.++
T Consensus        79 ~~~~~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~-~~~~vd~~~~~~~~~~~~i~~~~  156 (450)
T 3gw9_A           79 MVPVFGEGVAYAAPYPRMREQLNFL-AEELTIAKFQNFVPAIQHEVRKFMAANWDK-DEGEINLLEDCSTMIINTACQCL  156 (450)
T ss_dssp             GHHHHCTTSGGGSCHHHHHHHHHHH-HHTTSGGGCTTHHHHHHHHHHHHHHHHSCS-SEEEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCcccCCCcHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHhcc-CCCcccHHHHHHHHHHHHHHHHH
Confidence            3445677777766899999999999 6899999999999999999999999 6643 34579999999999999999999


Q ss_pred             hcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cCC
Q 009414          222 FGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQ-TSL  300 (535)
Q Consensus       222 fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~  300 (535)
                      ||.+++..   .  ...++.+.+.......  ......+|++.+++ ....++..++.+.+.+++.+.++++++.. ..+
T Consensus       157 fG~~~~~~---~--~~~~~~~~~~~~~~~~--~~~~~~~P~l~~lp-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~  228 (450)
T 3gw9_A          157 FGEDLRKR---L--DARRFAQLLAKMESSL--IPAAVFLPILLKLP-LPQSARCHEARTELQKILSEIIIARKEEEVNKD  228 (450)
T ss_dssp             SCHHHHHH---S--CHHHHHHHHHHHHHTC--CGGGGTCGGGGGSC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             cCcchhhh---h--hhHHHHHHHHHHHhcc--ccchhcccchhccC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence            99987651   1  1334444444443322  23345678887764 44556677888899999999999888653 122


Q ss_pred             CCCCcHHHHHhccCCC--CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHH--hChHHHHHHHHHHHHhhcCCCCCCh
Q 009414          301 QRNSDFVDVLLSLSGP--DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMV--LHPDIQSKVHSELDQVVGRSRPLTE  376 (535)
Q Consensus       301 ~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~--~~p~~~~~lr~Ei~~~~~~~~~~~~  376 (535)
                      ....|+++.+++...+  .+++++++.+++..+++||+|||+++++|++++|+  .||++|+++|+|++++   ...+++
T Consensus       229 ~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---~~~~~~  305 (450)
T 3gw9_A          229 SSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---PAQLNY  305 (450)
T ss_dssp             CCCCSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC---CSSCCH
T ss_pred             CccchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc---cCCCCh
Confidence            3334999999987533  35999999999999999999999999999999999  9999999999999987   566899


Q ss_pred             hhc-cCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCC
Q 009414          377 SDL-QSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEA  455 (535)
Q Consensus       377 ~~l-~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~  455 (535)
                      +++ ++||||+|||+|+||++|+++..  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|||+..   
T Consensus       306 ~~~~~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~~---  380 (450)
T 3gw9_A          306 NNVMDEMPFAERCARESIRRDPPLLML--MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK---  380 (450)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHSCSCCCE--EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCS---
T ss_pred             HHHHHhcHHHHHHHHHHHHhCCchhcc--ccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCcC---
Confidence            999 99999999999999999999976  799999999999999999999999999999999999999999999311   


Q ss_pred             CCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCcccccccccccc-CceeEEEEecc
Q 009414          456 ADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMK-NPLTVRVHARR  534 (535)
Q Consensus       456 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~r~  534 (535)
                               .+..|+|||.|+|+|+|++||++|++++++.||++|+|++.++...+.. ..+++..|+ .++.|++++|.
T Consensus       381 ---------~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~-~~~~~~~p~~~~~~v~~~~R~  450 (450)
T 3gw9_A          381 ---------VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPD-YHTMVVGPTASQCRVKYIRRK  450 (450)
T ss_dssp             ---------STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEE-TTSSSCEECGGGCEEEEEECC
T ss_pred             ---------CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCc-cccceecCCCCceEeEeeecC
Confidence                     2467999999999999999999999999999999999999865333222 234667787 79999999984


No 20 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=9.2e-71  Score=552.61  Aligned_cols=424  Identities=20%  Similarity=0.293  Sum_probs=349.8

Q ss_pred             CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCchhhhhh-----hhcccceeeCcCChhHH
Q 009414           87 NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKESAYS-----LMFNRAIGFAPYGVYWR  161 (535)
Q Consensus        87 ~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~g~~w~  161 (535)
                      ..++..+.+|+++|  |+||++++|+.++|+|+||+.+++|+.+..+.+++.......     ..+|.++++..+|+.|+
T Consensus        10 ~~~~~~~~~~~~ky--G~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~   87 (456)
T 3mdm_A           10 RVLQDVFLDWAKKY--GPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWH   87 (456)
T ss_dssp             CCHHHHHHHHHHHH--CSEEEEEETTEEEEEECCHHHHHHHHTCTTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHH
T ss_pred             chHHHHHHHHHHHh--CCeEEEEeCCCCEEEECCHHHHHHHHhhccccccchhHHHHHHhhcccccCCCcccCCChHHHH
Confidence            46789999999999  999999999999999999999999998767776654433222     12456666666899999


Q ss_pred             HHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCceeHHHHHHHHHHHHHHHHHhcccccccCCCCchHHHH
Q 009414          162 TLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARR  239 (535)
Q Consensus       162 ~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~  239 (535)
                      ++|+.+ .+.|+++.++.+.+.+++.++++++.+.+.  +++++|+.+++..+++|+++.++||.+++.+......    
T Consensus        88 ~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~----  162 (456)
T 3mdm_A           88 KQRRVI-DLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKP----  162 (456)
T ss_dssp             HHHHHH-GGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHH----
T ss_pred             HHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccH----
Confidence            999999 689999999999999999999999999875  4568999999999999999999999998875433322    


Q ss_pred             HHHHHHHHHHhccccccccccccccccc-hhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCC-CCCCcHHHHHhccCCCC
Q 009414          240 LSRLVEEGYDLLGKLNFSDHLPWLADFD-LQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSL-QRNSDFVDVLLSLSGPD  317 (535)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~d~l~~ll~~~~~~  317 (535)
                      +...+..........    ..|++.+++ .....+...+..+.+.+++.++++++++..+.+ +...|+++.+++.. ++
T Consensus       163 ~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~-~~  237 (456)
T 3mdm_A          163 LSQAVKLMLEGITAS----RNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAE-EG  237 (456)
T ss_dssp             HHHHHHHHHHHHHHH----HHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHT-SS
T ss_pred             HHHHHHHHHHHHHHH----HHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHhc-CC
Confidence            222222222211110    012222222 122334556667788888889998887764432 22349999999865 34


Q ss_pred             CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCC
Q 009414          318 RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHP  397 (535)
Q Consensus       318 ~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~  397 (535)
                      .++++++.+++..+++||+|||+++++|++++|++||++|++||+|+++++++++.++++++++||||+|||+|+||++|
T Consensus       238 ~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p  317 (456)
T 3mdm_A          238 AQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYP  317 (456)
T ss_dssp             CSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHHCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             CCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCC
Q 009414          398 PGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRR  477 (535)
Q Consensus       398 ~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r  477 (535)
                      +++..  .|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||+++..        .....|+|||.|+|
T Consensus       318 ~~~~~--~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~--------~~~~~~~pFg~G~r  387 (456)
T 3mdm_A          318 PAWGT--FRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP--------KPRFTYFPFSLGHR  387 (456)
T ss_dssp             SSCCE--EEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC--------CCSSSCCTTCCGGG
T ss_pred             Ccccc--ccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC--------CCCCcccCCCCCCc
Confidence            99977  799999999999999999999999999999999999999999999997531        13467999999999


Q ss_pred             CCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          478 TCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       478 ~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      +|+|++||++|++++++.|+++|++++.++.+.++  ....+..|++++.|++++|.
T Consensus       388 ~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~r~  442 (456)
T 3mdm_A          388 SCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGL--QEQATLKPLDPVLCTLRPRG  442 (456)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHHHEEEEECTTCCCCE--EESSSEEESSCCEEEEEECC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCccee--ecceEEecCCCeEEEEEEcC
Confidence            99999999999999999999999999988755443  34567789899999999986


No 21 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=3.4e-72  Score=563.59  Aligned_cols=440  Identities=19%  Similarity=0.274  Sum_probs=359.0

Q ss_pred             CCCCCCCCC-CCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC--CCCCCCCchh
Q 009414           64 KACSKPIPG-PRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS--SVFADRPVKE  140 (535)
Q Consensus        64 ~~~~~~~Pg-P~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~--~~~~~~~~~~  140 (535)
                      +++.+.||| |+++|++||++.+..+++.++.+++++|  |+||++++|+.++++|+||+.+++++.+  ..+.+++.+.
T Consensus         7 ~~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~y--G~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~   84 (461)
T 3i3k_A            7 PAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKY--GPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYS   84 (461)
T ss_dssp             ---CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHH--CSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHH
T ss_pred             CCCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHh--CCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHH
Confidence            445678999 8899999999999888999999999999  9999999999999999999999999975  3445444444


Q ss_pred             hhhhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHH
Q 009414          141 SAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCS  220 (535)
Q Consensus       141 ~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~  220 (535)
                      .....++|.++.+..+|+.|+++|+++ .+.|+...++.+.+.+.++++++++.|.+  ++.+|+.+.+..+++++++.+
T Consensus        85 ~~~~~~~g~g~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~~~~~  161 (461)
T 3i3k_A           85 RLTTPVFGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASHC  161 (461)
T ss_dssp             HHHHHHHCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHHH
T ss_pred             HhhhhhcCCeeeeCCCcHHHHHHHHHH-hhhhCHHHHHHHHHHHHHHHHHHHHHhhh--cCCcCHHHHHHHHHHHHHHHH
Confidence            444556788887776899999999999 57899999999999999999999998854  345899999999999999999


Q ss_pred             HhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCC
Q 009414          221 VFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSL  300 (535)
Q Consensus       221 ~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  300 (535)
                      +||.++..   ..++...+.   +........  .....+|.+  + +....++..++.+.+.+++.+.++++++..+  
T Consensus       162 ~~G~~~~~---~~~~~~~~~---~~~~~~~~~--~~~~~~P~~--l-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  228 (461)
T 3i3k_A          162 LHGKEIRS---QLNEKVAQL---YADLDGGFS--HAAWLLPGW--L-PLPSFRRRDRAHREIKDIFYKAIQKRRQSQE--  228 (461)
T ss_dssp             HTCHHHHH---TCCHHHHHH---HHHHHTTSS--HHHHHSCTT--S-CCHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--
T ss_pred             HccHhhhh---HHHHHHHHH---HHHHHhccc--cchhhcccc--c-CCHHHHHHHHHHHHHHHHHHHHHHHHHhccc--
Confidence            99988755   222222222   222221111  111123421  2 2334456677788888999999888765432  


Q ss_pred             CCCCcHHHHHhccCCCC--CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCC-CCCChh
Q 009414          301 QRNSDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRS-RPLTES  377 (535)
Q Consensus       301 ~~~~d~l~~ll~~~~~~--~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~-~~~~~~  377 (535)
                      ... |+++.+++...++  +++++++.++++.+++||+|||+++++|++++|++||++|+++|+|++++++++ ..++++
T Consensus       229 ~~~-d~l~~ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~  307 (461)
T 3i3k_A          229 KID-DILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYD  307 (461)
T ss_dssp             CCC-SHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHH
T ss_pred             ccc-cHHHHHHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCHH
Confidence            334 9999999876433  499999999999999999999999999999999999999999999999999864 456999


Q ss_pred             hccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCC
Q 009414          378 DLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAAD  457 (535)
Q Consensus       378 ~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~  457 (535)
                      ++++||||+|||+|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||++.+.. 
T Consensus       308 ~~~~l~~l~a~i~E~lRl~p~~~~~--~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~-  384 (461)
T 3i3k_A          308 QLKDLNLLDRCIKETLRLRPPIMIM--MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA-  384 (461)
T ss_dssp             HHHTCHHHHHHHHHHHHHSCSCCCE--EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHH-
T ss_pred             HHhcChHHHHHHHHHHhcCCCcccc--ccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCC-
Confidence            9999999999999999999999876  8999999999999999999999999999999999999999999999975411 


Q ss_pred             ccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEE
Q 009414          458 MDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVH  531 (535)
Q Consensus       458 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  531 (535)
                           ......|+|||+|+|+|||++||++|++++++.||++|++++.++...+.. ...+...|++|+.++=.
T Consensus       385 -----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~  452 (461)
T 3i3k_A          385 -----SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVN-YTTMIHTPENPVIRYKR  452 (461)
T ss_dssp             -----HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBC-CSSSSCCBSSCEEEEEE
T ss_pred             -----CCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcc-cceeecCCCCceEEeec
Confidence                 113567999999999999999999999999999999999999887433333 44566788888766543


No 22 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=2.5e-72  Score=565.03  Aligned_cols=435  Identities=20%  Similarity=0.340  Sum_probs=330.7

Q ss_pred             CCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCchhhhhhhh
Q 009414           67 SKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKESAYSLM  146 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~  146 (535)
                      ..+||||+++|++||++.+..+++.++.++++ |  |+||++++|+.++++|+||+.+++|+.+..|..++.........
T Consensus        22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-y--Gpv~~~~~g~~~~~vv~~~~~i~~il~~~~~~~~~~~~~~~~~~   98 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-H--GDVVRIKLGPKTVYAVTNPELTGALALNPDYHIAGPLWESLEGL   98 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-G--CSEEEEEETTEEEEEECSHHHHHHHHHCTTC-------------
T ss_pred             CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-h--CCEEEEEeCCccEEEECCHHHHHHHHhCcCcccccchHHHHHHh
Confidence            45689999999999999998899999999988 9  99999999999999999999999999876664333333333334


Q ss_pred             cc-cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHhccc
Q 009414          147 FN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRK  225 (535)
Q Consensus       147 ~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~  225 (535)
                      .| .++++ .+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+  ++++|+.+++..+++++++.++||.+
T Consensus        99 ~g~~~l~~-~dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~vi~~~~~g~~  174 (467)
T 3dbg_A           99 LGKEGVAT-ANGPLHRRQRRTI-QPAFRLDAIPAYGPIMEEEAHALTERWQP--GKTVDATSESFRVAVRVAARCLLRGQ  174 (467)
T ss_dssp             ------------------CGGG-HHHHSTTTSTTTHHHHHHHHHHHHHHSCT--TSCEEHHHHHHHHHHHHHHHHHSCSS
T ss_pred             cCCCCccc-CCcHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhcc--CCcCcHHHHHHHHHHHHHHHHHhCCc
Confidence            55 56644 5999999999999 68999999999999999999999999854  66899999999999999999999988


Q ss_pred             ccccCCCCchHHHHHHHHHHHHHHhcccccccccccc--ccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCC
Q 009414          226 YALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPW--LADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRN  303 (535)
Q Consensus       226 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  303 (535)
                      ++.      +....+...+.........   ...+|+  +.++ +....++..++.+.+.+++.+.+++++++..  ...
T Consensus       175 ~~~------~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--~~~  242 (467)
T 3dbg_A          175 YMD------ERAERLCVALATVFRGMYR---RMVVPLGPLYRL-PLPANRRFNDALADLHLLVDEIIAERRASGQ--KPD  242 (467)
T ss_dssp             CCH------HHHHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHHHHHTTCCS--SCC
T ss_pred             ccc------hhHHHHHHHHHHHHHHHHH---HhccchhhhhhC-CChHhHHHHHHHHHHHHHHHHHHHHHHhcCC--Cch
Confidence            754      2344555555554443221   122332  3333 2334456677888899999999988775422  334


Q ss_pred             CcHHHHHhccCCCC--CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccC
Q 009414          304 SDFVDVLLSLSGPD--RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQS  381 (535)
Q Consensus       304 ~d~l~~ll~~~~~~--~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~  381 (535)
                       |+++.|++..+++  +++++++.+++..+++||+|||+++++|++++|++||++|++||+|+++++++ ..++++++++
T Consensus       243 -dll~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~-~~~~~~~l~~  320 (467)
T 3dbg_A          243 -DLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVAFEDVRK  320 (467)
T ss_dssp             -SHHHHHTTC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT-SCCCHHHHTT
T ss_pred             -HHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCHHHHhh
Confidence             9999999875432  59999999999999999999999999999999999999999999999999985 7899999999


Q ss_pred             CCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCcccc
Q 009414          382 MVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDIS  461 (535)
Q Consensus       382 lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~  461 (535)
                      ||||+|||+|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||++++..     
T Consensus       321 l~yl~a~i~E~lRl~p~~~~~--~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~-----  393 (467)
T 3dbg_A          321 LRHTGNVIVEAMRLRPAVWVL--TRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA-----  393 (467)
T ss_dssp             CHHHHHHHHHHHHHSCSCCCE--EEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHT-----
T ss_pred             CHHHHHHHHHHhhcCCCcccc--ceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccc-----
Confidence            999999999999999999886  8999999999999999999999999999999999999999999999964311     


Q ss_pred             ccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEec
Q 009414          462 LMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR  533 (535)
Q Consensus       462 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  533 (535)
                       ......|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+  .....+++.+|+ ++.++=..|
T Consensus       394 -~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~p~-~l~~~~~~~  461 (467)
T 3dbg_A          394 -NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSN--DAVRVGITLRPH-DLLVRPVAR  461 (467)
T ss_dssp             -TSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCE--EEEEESSSEEEE-ECEEEEEEC
T ss_pred             -cCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCC--CccceeeEecCC-CCccchhhh
Confidence             12456799999999999999999999999999999999999988643  344556777673 554444333


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=3e-68  Score=539.70  Aligned_cols=447  Identities=15%  Similarity=0.197  Sum_probs=329.0

Q ss_pred             CCCCCCCCCC-CCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCC-CCCCCchhhhh
Q 009414           66 CSKPIPGPRG-LPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSV-FADRPVKESAY  143 (535)
Q Consensus        66 ~~~~~PgP~~-~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~-~~~~~~~~~~~  143 (535)
                      ..+.||||++ +|++||++++..+++.++.+++++|  |++|++++|+.++++|+||+.+++|+++.. +..++......
T Consensus        11 ~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~ky--G~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~~~   88 (491)
T 3dax_A           11 QTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKH--GHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFATS   88 (491)
T ss_dssp             CTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHH--CSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHHHH
T ss_pred             CCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhc--CCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHHHH
Confidence            3567999988 8999999999888999999999999  999999999999999999999999998533 34333332222


Q ss_pred             hhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh-----CCCceeHHHHHHHHHHHHHH
Q 009414          144 SLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY-----GGSAFRLRDILKPASLNNMM  218 (535)
Q Consensus       144 ~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~-----~~~~vdl~~~~~~~~~~vi~  218 (535)
                      ...+|.+++...+|+.|+++|+.+ .+.|+.+.++.+.+.+.+.+.++++.....     ....+++..++.++++++++
T Consensus        89 ~~~~g~~~~~~~~g~~w~~~r~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  167 (491)
T 3dax_A           89 AKAFGHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGY  167 (491)
T ss_dssp             HHHHTCCCCCGGGTSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHHHH
T ss_pred             HHHcCCCcccccchhHHHHHHHHH-HHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHHhH
Confidence            334565654244788999999998 468999999998888888887777655321     12357899999999999999


Q ss_pred             HHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 009414          219 CSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQT  298 (535)
Q Consensus       219 ~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  298 (535)
                      .+.||.++..    ++.....+....+.+..      +.+.+|++.+..+....++..+..+.+.+.+   ++++.++. 
T Consensus       168 ~~~fG~~~~~----~~~~~~~~~~~~~~~~~------~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~~~~~~~~-  233 (491)
T 3dax_A          168 LTIFGRDLTR----RDTQKAHILNNLDNFKQ------FDKVFPALVAGLPIHMFRTAHNAREKLAESL---RHENLQKR-  233 (491)
T ss_dssp             HHHHCBCSTT----GGGHHHHHHHHHHHHHH------HHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---SHHHHTTC-
T ss_pred             HHHcCccccc----ccchhhhhhHHHHHHHH------HHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---HHHHhhcc-
Confidence            9999987654    11122122222221111      1123443322111111223333333333322   22222221 


Q ss_pred             CCCCCCcHHHHHhccCCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCC-----
Q 009414          299 SLQRNSDFVDVLLSLSGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSR-----  372 (535)
Q Consensus       299 ~~~~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~-----  372 (535)
                       .... |+++.+++..++ +.++++++.++++.+++||+|||+++++|++++|++||++|+++|+||++++++++     
T Consensus       234 -~~~~-d~l~~ll~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~  311 (491)
T 3dax_A          234 -ESIS-ELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSL  311 (491)
T ss_dssp             -BSCC-HHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCS
T ss_pred             -cchh-HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhcccccccc
Confidence             1333 999988765322 24789999999999999999999999999999999999999999999999987543     


Q ss_pred             -----CCChhhccCCCchhHHHHhhhcCCCCCCccccccccccccee----cCeeeCCCCEEEEehhhhhcCCCCCCCCC
Q 009414          373 -----PLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTV----DHYHVPAGTTAMVNIWAIMRDPEIYADPL  443 (535)
Q Consensus       373 -----~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~----~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  443 (535)
                           .++++++++||||+|||+||||++|+ +.+  +|.+.+|+++    +||.||||+.|.++.+++|+||++|+||+
T Consensus       312 ~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~--~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~  388 (491)
T 3dax_A          312 EGNPICLSQAELNDLPVLDSIIKESLRLSSA-SLN--IRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPL  388 (491)
T ss_dssp             SSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-ECE--EEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSSTT
T ss_pred             CCCccccCHHHHhcCHHHHHHHHHHHhcCCC-ccc--eeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCCHH
Confidence                 36999999999999999999999975 655  8999999999    78999999999999999999999999999


Q ss_pred             CCCCCccCCCCCCCc-ccc--ccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCC--CCCccc-ccc
Q 009414          444 KFMPERFVNPEAADM-DIS--LMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYD--PVDLSE-VLR  517 (535)
Q Consensus       444 ~F~P~R~l~~~~~~~-~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~-~~~  517 (535)
                      +|+||||++++.... +..  ....+..|+|||+|+|+|||++||++|+++++|.||++|+|++.++.  +.+++. ..+
T Consensus       389 ~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  468 (491)
T 3dax_A          389 TFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAG  468 (491)
T ss_dssp             SCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTB
T ss_pred             HcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCccccc
Confidence            999999996542110 000  00134679999999999999999999999999999999999998763  233333 234


Q ss_pred             c-cccccCceeEEEEecc
Q 009414          518 L-SCEMKNPLTVRVHARR  534 (535)
Q Consensus       518 ~-~~~~~~~~~v~~~~r~  534 (535)
                      + +..|+.++.|+++.+-
T Consensus       469 ~~~~~p~~~~~~~~r~~~  486 (491)
T 3dax_A          469 LGILPPLNDIEFKYKFKH  486 (491)
T ss_dssp             EEECCBSSCCEEEEEECC
T ss_pred             ccccCCCCCceEEEEecc
Confidence            3 4577788888887653


No 24 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=1.6e-68  Score=541.16  Aligned_cols=447  Identities=15%  Similarity=0.186  Sum_probs=349.5

Q ss_pred             CCCCCCCCCC-CCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCC-CCCCCchhhhh
Q 009414           66 CSKPIPGPRG-LPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSV-FADRPVKESAY  143 (535)
Q Consensus        66 ~~~~~PgP~~-~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~-~~~~~~~~~~~  143 (535)
                      ..+.||||++ +|++||++.+..+++.++.+++++|  |+||++++|+.++++|+||+.+++++++.+ +..........
T Consensus        11 ~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~y--Gpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~~~   88 (491)
T 3v8d_A           11 QTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKH--GHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFALS   88 (491)
T ss_dssp             CTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHH--CSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHHHH
T ss_pred             CCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHc--CCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHHHH
Confidence            4568999998 7999999999999999999999999  999999999999999999999999998643 44444433344


Q ss_pred             hhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh-----CCCceeHHHHHHHHHHHHHH
Q 009414          144 SLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY-----GGSAFRLRDILKPASLNNMM  218 (535)
Q Consensus       144 ~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~-----~~~~vdl~~~~~~~~~~vi~  218 (535)
                      ...+|.+.....+|+.|+++|+.+ .+.|+++.++.+.+.+.++++++++.+...     ....+++.+++..+++++++
T Consensus        89 ~~~~g~~~~~~~~g~~~~~~Rr~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  167 (491)
T 3v8d_A           89 AKAFGHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGY  167 (491)
T ss_dssp             HHHHTCCCCCGGGSSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHHHHH
T ss_pred             HHhcCCcccccccchhHHHHHHHH-HHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHHHHH
Confidence            455665555555899999999988 688999999999999999999999754221     23468999999999999999


Q ss_pred             HHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 009414          219 CSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQT  298 (535)
Q Consensus       219 ~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  298 (535)
                      ..+||.++..    .++....+.+.++.+...      .+.+|.+....+....++..++.+.+.+++.+.+++++   +
T Consensus       168 ~~~fG~~~~~----~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~---~  234 (491)
T 3v8d_A          168 LTIFGRDLTR----RDTQKAHILNNLDNFKQF------DKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKR---E  234 (491)
T ss_dssp             HHHHCBCCSC----GGGHHHHHHHHHHHHHHH------HHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTC---B
T ss_pred             HHHcCccccc----cchhhhhhHHHHHHHHHH------HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcc---c
Confidence            9999988654    122333344444333321      12223222211233345566666666666665554332   1


Q ss_pred             CCCCCCcHHHHHhccCCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCC------
Q 009414          299 SLQRNSDFVDVLLSLSGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRS------  371 (535)
Q Consensus       299 ~~~~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~------  371 (535)
                        +.. |+++.+++..++ +.++++++..+++.+++||+|||+++++|++++|++||++|++||+||+++++++      
T Consensus       235 --~~~-d~l~~l~~~~~~~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~  311 (491)
T 3v8d_A          235 --SIS-ELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSL  311 (491)
T ss_dssp             --SCC-HHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred             --ccc-HHHHHHHHHhhccCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhcccccccc
Confidence              233 899998875433 3589999999999999999999999999999999999999999999999998643      


Q ss_pred             ----CCCChhhccCCCchhHHHHhhhcCCCCCCccccccccccccee----cCeeeCCCCEEEEehhhhhcCCCCCCCCC
Q 009414          372 ----RPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTV----DHYHVPAGTTAMVNIWAIMRDPEIYADPL  443 (535)
Q Consensus       372 ----~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~----~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  443 (535)
                          ..+++++++++|||+|||+|+||++| ++.+  .|.+.+|+++    +||.||||+.|.++.+++|+||++|+||+
T Consensus       312 ~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p-~~~~--~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  388 (491)
T 3v8d_A          312 EGNPICLSQAELNDLPVLDSIIKESLRLSS-ASLN--IRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPL  388 (491)
T ss_dssp             SSSCCCCCHHHHHCCHHHHHHHHHHHHHHE-EECE--EEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSSTT
T ss_pred             ccccccCCHHHHhcChHHHHHHHHHhhcCC-CCcc--ceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCCCcc
Confidence                46889999999999999999999997 4455  7999999999    99999999999999999999999999999


Q ss_pred             CCCCCccCCCCCCCccc---cccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCC--CCCccc-ccc
Q 009414          444 KFMPERFVNPEAADMDI---SLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYD--PVDLSE-VLR  517 (535)
Q Consensus       444 ~F~P~R~l~~~~~~~~~---~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~-~~~  517 (535)
                      +|+|+||++.+......   .....+..|+|||+|+|.|+|++||++|++++++.|+++|+|++.+++  ..+.+. ..+
T Consensus       389 ~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~  468 (491)
T 3v8d_A          389 TFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAG  468 (491)
T ss_dssp             SCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTB
T ss_pred             ccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCc
Confidence            99999999765321100   001135679999999999999999999999999999999999998762  233333 223


Q ss_pred             -ccccccCceeEEEEecc
Q 009414          518 -LSCEMKNPLTVRVHARR  534 (535)
Q Consensus       518 -~~~~~~~~~~v~~~~r~  534 (535)
                       .+..|+.++.|++|..-
T Consensus       469 ~~~~~p~~~i~v~~~~~~  486 (491)
T 3v8d_A          469 LGILPPLNDIEFKYKFKH  486 (491)
T ss_dssp             EEECCBSSCCEEEEEECS
T ss_pred             CcccCCCCCeEEEEEecc
Confidence             45788889999998754


No 25 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=2.5e-66  Score=526.17  Aligned_cols=448  Identities=15%  Similarity=0.189  Sum_probs=324.3

Q ss_pred             CCCCCCCCCC-CCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCC--CCCCCchhhh
Q 009414           66 CSKPIPGPRG-LPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSV--FADRPVKESA  142 (535)
Q Consensus        66 ~~~~~PgP~~-~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~--~~~~~~~~~~  142 (535)
                      ..+.||||++ +|++||++.+..+++.++.+++++|  |+||++++|++++++|+||+.+++++++..  ++.++.....
T Consensus        16 ~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kY--G~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~   93 (498)
T 3b6h_A           16 RPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKH--GDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFL   93 (498)
T ss_dssp             CTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHH--CSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHH
T ss_pred             CCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHc--CCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHH
Confidence            3567999988 9999999998778999999999999  999999999999999999999999998533  4544433333


Q ss_pred             hhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh---CCCceeHHHHHHHHHHHHHHH
Q 009414          143 YSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY---GGSAFRLRDILKPASLNNMMC  219 (535)
Q Consensus       143 ~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~---~~~~vdl~~~~~~~~~~vi~~  219 (535)
                      ....+|.+++. .+|+.|   |+.+ .+.|+.+.++.+.+.+.+.+.+.++.....   ....+++..++..+++++++.
T Consensus        94 ~~~~~g~~~~~-~~~~~~---rr~~-~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~  168 (498)
T 3b6h_A           94 MERIFDVQLPH-YSPSDE---KARM-KLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYL  168 (498)
T ss_dssp             HHHTSCCCCTT-CCHHHH---HHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCccc-cCHHHH---HHHH-HHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHHH
Confidence            33445666543 366666   4455 457888888888887777777776655332   223578999999999999999


Q ss_pred             HHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccc-cchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 009414          220 SVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLAD-FDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQT  298 (535)
Q Consensus       220 ~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  298 (535)
                      ++||.+++.   .+..........+........  .+.+.+|++.+ +.+....+...++.+.+.+.+   ++++.++. 
T Consensus       169 ~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-  239 (498)
T 3b6h_A          169 TLYGIEALP---RTHESQAQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLL---SPARLARR-  239 (498)
T ss_dssp             HHHCBSCSS---CCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHT---CHHHHTTC-
T ss_pred             hhcCccccc---ccccchhhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHH---HHHHHhcc-
Confidence            999988754   221111112222222222111  11233453321 111222223333333333322   22222221 


Q ss_pred             CCCCCCcHHHHHhccCCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCC-----
Q 009414          299 SLQRNSDFVDVLLSLSGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSR-----  372 (535)
Q Consensus       299 ~~~~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~-----  372 (535)
                       .... |+++.+++..++ +.++++++. +++.+++||+|||+++++|++++|++||++|+++|+|+++++++++     
T Consensus       240 -~~~~-d~l~~ll~~~~~~~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~  316 (498)
T 3b6h_A          240 -AHRS-KWLESYLLHLEEMGVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQ  316 (498)
T ss_dssp             -BSCC-HHHHHHHHHHHHTTCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC-------
T ss_pred             -ccHH-HHHHHHHHHHHhCCCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCCc
Confidence             1334 999998875433 246777777 8888999999999999999999999999999999999999998654     


Q ss_pred             --CCChhhccCCCchhHHHHhhhcCCCCCCccccccccccccee-----cCeeeCCCCEEEEehhh-hhcCCCCCCCCCC
Q 009414          373 --PLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTV-----DHYHVPAGTTAMVNIWA-IMRDPEIYADPLK  444 (535)
Q Consensus       373 --~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~-----~g~~ip~G~~v~~~~~~-~~~d~~~~~~p~~  444 (535)
                        .++++++++||||+|||+|+||++|+ +.+  +|.+.+|+++     +||.||||+.|.++.++ +|+||++|+||++
T Consensus       317 ~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~--~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p~~  393 (498)
T 3b6h_A          317 TTTLPQKVLDSTPVLDSVLSESLRLTAA-PFI--TREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEV  393 (498)
T ss_dssp             ---CCTHHHHSCHHHHHHHHHHHHHHBC-BCE--EEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTS
T ss_pred             ccccCHHHHhcCHHHHHHHHHHHhccCC-Ccc--eeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCChhh
Confidence              36999999999999999999999985 555  8999999998     68999999999999999 9999999999999


Q ss_pred             CCCCccCCCCCCCcc-c--cccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCC--CCCccc-cccc
Q 009414          445 FMPERFVNPEAADMD-I--SLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYD--PVDLSE-VLRL  518 (535)
Q Consensus       445 F~P~R~l~~~~~~~~-~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~-~~~~  518 (535)
                      |+||||++.+..... .  .....+..|+|||+|+|+|||++||++|+++++|.||++|+|++.++.  ..+.+. ..+.
T Consensus       394 F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  473 (498)
T 3b6h_A          394 FKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGF  473 (498)
T ss_dssp             CCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBS
T ss_pred             cCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCcccccc
Confidence            999999975422100 0  000134679999999999999999999999999999999999998753  222332 1333


Q ss_pred             -cccccCceeEEEEeccC
Q 009414          519 -SCEMKNPLTVRVHARRR  535 (535)
Q Consensus       519 -~~~~~~~~~v~~~~r~~  535 (535)
                       +..|..++.|++++|.+
T Consensus       474 ~~~~p~~~~~~~~~~~~~  491 (498)
T 3b6h_A          474 GLMQPEHDVPVRYRIRPH  491 (498)
T ss_dssp             SBCCBSSCCEEEEEECCC
T ss_pred             ccCCCCCCccEEEEeccc
Confidence             45777789999988864


No 26 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=2.2e-64  Score=499.13  Aligned_cols=406  Identities=15%  Similarity=0.215  Sum_probs=326.1

Q ss_pred             CCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCchh-hhhhhhc
Q 009414           69 PIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKE-SAYSLMF  147 (535)
Q Consensus        69 ~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~-~~~~~~~  147 (535)
                      +||||   |++||+..+..+++.++.+++++|| ||||++++++.++++|+||+.++.++....|.+++... .....++
T Consensus         4 p~Pg~---P~lG~~~~~~~~p~~~~~~l~~~yg-~pv~~~~~~g~~~v~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   79 (417)
T 1izo_A            4 QIPHD---KSLDNSLTLLKEGYLFIKNRTERYN-SDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLF   79 (417)
T ss_dssp             --CBC---CCTTHHHHHHHHGGGHHHHHHHHTT-SSEEEEEETTEEEEEECSHHHHHHHTCTTTEECTTCSCHHHHTTTT
T ss_pred             CCCCC---CccchHHHHhhCcHHHHHHHHHHhC-CCeEEeecCCccEEEECCHHHHHHHhcccccccccccccchhhhhc
Confidence            35665   8999999988889999999999993 39999999998999999999998766555566543322 2223345


Q ss_pred             ccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHhccccc
Q 009414          148 NRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYA  227 (535)
Q Consensus       148 g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~  227 (535)
                      |.+.++..+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.|.+  ++++|+.+++..+++++++.+ ||.+++
T Consensus        80 g~~~l~~~dg~~h~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~vi~~~-~G~~~~  155 (417)
T 1izo_A           80 GVNAIQGMDGSAHIHRKMLF-LSLMTPPHQKRLAELMTEEWKAAVTRWEK--ADEVVLFEEAKEILCRVACYW-AGVPLK  155 (417)
T ss_dssp             CTTCGGGCCHHHHHHHHHHH-HHTSSHHHHHHHHHHHHHHHHHHHHHHTT--SSEEEHHHHHHHHHHHHHHHH-HTCCCC
T ss_pred             cccceeecCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHhc--CCCeeHHHHHHHHHHHHHHHH-cCCCCC
Confidence            63323455999999999999 68999999999999999999999999965  568999999999999999998 698765


Q ss_pred             ccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHH
Q 009414          228 LLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFV  307 (535)
Q Consensus       228 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l  307 (535)
                      .   .   +..++.+.+.........            +  ....++..++.+.+.+++.++|++++++......+ |++
T Consensus       156 ~---~---~~~~~~~~~~~~~~~~~~------------~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~-d~l  214 (417)
T 1izo_A          156 E---T---EVKERADDFIDMVDAFGA------------V--GPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSG-TAL  214 (417)
T ss_dssp             T---T---THHHHHHHHHHHHHHTTC------------C--SHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTT-SHH
T ss_pred             c---h---HHHHHHHHHHHHHhhccc------------C--CccchhHHHHHHHHHHHHHHHHHHHHhhccCCCcC-CHH
Confidence            4   1   233444444333332110            0  11223455677889999999999988654322333 999


Q ss_pred             HHHhccCCC--CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCch
Q 009414          308 DVLLSLSGP--DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYL  385 (535)
Q Consensus       308 ~~ll~~~~~--~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l  385 (535)
                      +.|++..++  ..++++++..++..+ +||++||+++++|++++|++||++|++|++|                 ++|||
T Consensus       215 ~~ll~~~~~~g~~l~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-----------------~~~~l  276 (417)
T 1izo_A          215 HEMAFHTQEDGSQLDSRMAAIELINV-LRPIVAISYFLVFSALALHEHPKYKEWLRSG-----------------NSRER  276 (417)
T ss_dssp             HHHHHCBCTTSCBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-----------------CHHHH
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc-----------------CCHHH
Confidence            999987543  247888777776655 4999999999999999999999999999987                 36899


Q ss_pred             hHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCC
Q 009414          386 PAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGS  465 (535)
Q Consensus       386 ~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~  465 (535)
                      +|||+|+||++|+++..  .|.+.+|++++|+.||||+.|.++.+++|+||++|+||++|+|+||++.+         ..
T Consensus       277 ~a~i~E~lRl~p~~~~~--~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~---------~~  345 (417)
T 1izo_A          277 EMFVQEVRRYYPFGPFL--GALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE---------EN  345 (417)
T ss_dssp             HHHHHHHHHHSCCCCEE--EEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC---------CC
T ss_pred             HHHHHHHhhcCCccccc--ceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC---------CC
Confidence            99999999999999986  89999999999999999999999999999999999999999999998643         13


Q ss_pred             CCceeccCCC----CCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          466 DLRLAPFGSG----RRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       466 ~~~~~~Fg~G----~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      ...|+|||.|    +|.|+|++||++|++++++.|+++|++++.+++ ..+. ...++..|+++++|++++|.
T Consensus       346 ~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~-~~~~-~~~~~~~p~~~~~~~~~~r~  416 (417)
T 1izo_A          346 LFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQS-LHYS-LARMPSLPESGFVMSGIRRK  416 (417)
T ss_dssp             SSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCC-CCCC-SSSSSCCCTTCCEEEEEEEC
T ss_pred             CcceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC-cCcc-cccCCCCCCCCceEeeeeCC
Confidence            4679999999    599999999999999999999999999987642 2222 23567789899999999985


No 27 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=7.8e-65  Score=503.40  Aligned_cols=395  Identities=17%  Similarity=0.221  Sum_probs=311.1

Q ss_pred             CCCCCCCCCCCcccccc-ccCCChhHHHHHHHHHhcCcceEEEEe-CCeeEEEecCHHHHHHHhcCCCCCCCCch--hhh
Q 009414           67 SKPIPGPRGLPFIGSMS-LMTNLPHHNLAAAAEAYKAKRVMAFSL-GETRVIITCSPDVAKEILNSSVFADRPVK--ESA  142 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~-~~~~~~~~~l~~~~~ky~~G~v~~~~~-g~~~~vvv~dp~~i~~i~~~~~~~~~~~~--~~~  142 (535)
                      .+.||||+++|++|++. .+..+++..+.++ ++|  |+||++++ |+.++++|+||+.+++|+.+..|++++..  ...
T Consensus        25 ~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~y--Gpv~~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~  101 (436)
T 2cd8_A           25 QQGTTASPPVLDLGALGQDFAADPYPTYARL-RAE--GPAHRVRTPEGDEVWLVVGYDRARAVLADPRFSKDWRNSTTPL  101 (436)
T ss_dssp             ---------CCBHHHHHHHHHHCCHHHHHHH-HTT--CSEEEEECSSCCEEEEECSHHHHHHHHHCTTEECCGGGCSSCC
T ss_pred             ccCCCCCCccccCCCCCcccccChHHHHHHH-HHh--CCeeeeccCCCCeEEEEcCHHHHHHHHcCCCCccccccccccc
Confidence            35699999999999986 5557889999999 899  99999998 78889999999999999986677776542  111


Q ss_pred             h--hhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHH
Q 009414          143 Y--SLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMC  219 (535)
Q Consensus       143 ~--~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~  219 (535)
                      .  ....+.++++ .+|+.|+++|+.+ .+.|+++.++.+.+.+++.++++++.|.+..++++|+.+++ ..+++++++.
T Consensus       102 ~~~~~~~~~~l~~-~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~vi~~  179 (436)
T 2cd8_A          102 TEAEAALNHNMLE-SDPPRHTRLRKLV-AREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVISE  179 (436)
T ss_dssp             CTTGGGTCCSGGG-CCTTHHHHHHHHH-GGGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHHHHH
T ss_pred             ccccccccccccc-cCchHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHH
Confidence            0  0223456544 5999999999999 68999999999999999999999999975335689999976 5799999998


Q ss_pred             HHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcC
Q 009414          220 SVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTS  299 (535)
Q Consensus       220 ~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  299 (535)
                       +||.+.+.        ...+......++..      .   +      +    ++..++.+.+.+++.+.|++++++   
T Consensus       180 -~~G~~~~~--------~~~~~~~~~~~~~~------~---~------~----~~~~~~~~~~~~~~~~~i~~r~~~---  228 (436)
T 2cd8_A          180 -LLGVPEPD--------RAAFRVWTDAFVFP------D---D------P----AQAQTAMAEMSGYLSRLIDSKRGQ---  228 (436)
T ss_dssp             -HHTCCGGG--------HHHHHHHHHHHHSC------S---S------T----THHHHHHHHHHHHHHHHHHHHTTS---
T ss_pred             -HhCCCHHH--------HHHHHHHHHHHhcc------C---C------H----HHHHHHHHHHHHHHHHHHHHHhcC---
Confidence             79986532        22333333333210      0   0      1    234566778888999988887653   


Q ss_pred             CCCCCcHHHHHhccCC--CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChh
Q 009414          300 LQRNSDFVDVLLSLSG--PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTES  377 (535)
Q Consensus       300 ~~~~~d~l~~ll~~~~--~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~  377 (535)
                       ..+ |+++.|++...  +..++++++.+++..+++||+|||+++++|++++|++||++|++|++|++            
T Consensus       229 -~~~-d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~------------  294 (436)
T 2cd8_A          229 -DGE-DLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT------------  294 (436)
T ss_dssp             -CCC-SHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------
T ss_pred             -CCC-CHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChh------------
Confidence             223 99999997643  34699999999999999999999999999999999999999999999853            


Q ss_pred             hccCCCchhHHHHhhhcCCCCCC-cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCC
Q 009414          378 DLQSMVYLPAVVKEVVRLHPPGP-LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAA  456 (535)
Q Consensus       378 ~l~~lp~l~a~i~EtlRl~~~~~-~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~  456 (535)
                            ||+|||+|+||++|+++ .+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||-     
T Consensus       295 ------~l~a~i~E~lRl~p~~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-----  361 (436)
T 2cd8_A          295 ------LLDGAVEEMLRYEGPVESAT--YRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT-----  361 (436)
T ss_dssp             ------GHHHHHHHHHHHHCSBSSCC--CBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSCC-----
T ss_pred             ------hHHHHHHHHHHhcCcccCce--eEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCCC-----
Confidence                  79999999999999999 55  89999999999999999999999999999999999999999999951     


Q ss_pred             CccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEeccC
Q 009414          457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR  535 (535)
Q Consensus       457 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  535 (535)
                                ..++|||.|+|.|+|++||++|++++++.|+++| ++++..+ ..++........++..+++|++++|++
T Consensus       362 ----------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~l~v~~~~r~~  430 (436)
T 2cd8_A          362 ----------AGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVS-PGELVWYPNPMIRGLKALPIRWRRGRE  430 (436)
T ss_dssp             ----------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSC-GGGCCBCCCTTBCCBSCCEEC------
T ss_pred             ----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCC-CccceeccCcccCCcceeEEEEecCcc
Confidence                      2589999999999999999999999999999999 6998642 112222334455677899999999863


No 28 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=3.4e-65  Score=499.55  Aligned_cols=386  Identities=20%  Similarity=0.249  Sum_probs=311.8

Q ss_pred             CCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCchhhhhhhhcccce
Q 009414           72 GPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKESAYSLMFNRAI  151 (535)
Q Consensus        72 gP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~g~~~  151 (535)
                      ++...|++||++.+..+++.++.+++++|  |++++ ++|+.++++|+||+.+++|+.+..|++++........+.|.++
T Consensus         3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~y--Gpv~~-~~g~~~~vvv~~~~~i~~il~~~~f~~~~~~~~~~~~~~g~~l   79 (389)
T 1n97_A            3 RLSLREAWPYLKDLQQDPLAVLLAWGRAH--PRLFL-PLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGL   79 (389)
T ss_dssp             ECCHHHHHHHHHHHHHCHHHHHHHHHHHC--SEEEE-CCTTCCEEEECSHHHHHHHHHCTTEECCSHHHHHHHHHHCSST
T ss_pred             ccccccccccHHHHhhChHHHHHHHHHHc--CCeeE-ecCCccEEEECCHHHHHHHHhcCCCCCChhHHHHHHHHhCCcc
Confidence            45568999999988778999999999999  99999 9999999999999999999986577777622222233456676


Q ss_pred             eeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHhcccccccCC
Q 009414          152 GFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGY  231 (535)
Q Consensus       152 ~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~l~~  231 (535)
                      ++. +|+.|+++|+.+ .+.|+++.++.+.+.+++.++++++.+.   ++++|+.+++..+++|+++.++||.+++.   
T Consensus        80 ~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~---~~~~dl~~~~~~~~~~vi~~~~fG~~~~~---  151 (389)
T 1n97_A           80 LTD-WGESWKEARKAL-KDPFLPKNVRGYREAMEEEARAFFGEWR---GEERDLDHEMLALSLRLLGRALFGKPLSP---  151 (389)
T ss_dssp             TTC-CHHHHHHHHHHH-CGGGSHHHHHTTHHHHHHHHHHHHHTCC---SCCEEHHHHHHHHHHHHHHHHHHSSCCCH---
T ss_pred             ccC-CcHHHHHHHHHh-CcccCHHHHHHHHHHHHHHHHHHHHHcc---CCcCcHHHHHHHHHHHHHHHHHcCCcchH---
Confidence            554 899999999999 6899999999999999999999999885   56899999999999999999999987641   


Q ss_pred             CCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHh
Q 009414          232 SSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLL  311 (535)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll  311 (535)
                             ++.+.+........ ...   ++++.++ +....++..++.+.+.+++.+.++++                ++
T Consensus       152 -------~~~~~~~~~~~~~~-~~~---~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~i~~r----------------ll  203 (389)
T 1n97_A          152 -------SLAEHALKALDRIM-AQT---RSPLALL-DLAAEARFRKDRGALYREAEALIVHP----------------PL  203 (389)
T ss_dssp             -------HHHHHHHHHHHHHH-HHH---HCGGGGG-CHHHHHHHHHHHHHHHHHHGGGTTST----------------TG
T ss_pred             -------HHHHHHHHHHHHHH-HHH---hhHHHhc-CCchhHHHHHHHHHHHHHHHHHHHHH----------------hc
Confidence                   23333333332221 111   1111222 22233344455555555555544322                22


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHh
Q 009414          312 SLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKE  391 (535)
Q Consensus       312 ~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E  391 (535)
                           ++++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+.                  |||+|
T Consensus       204 -----~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~------------------a~i~E  260 (389)
T 1n97_A          204 -----SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AAFQE  260 (389)
T ss_dssp             -----GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH------------------HHHHH
T ss_pred             -----ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH------------------HHHHH
Confidence                 3589999999999999999999999999999999999999999999999863                  99999


Q ss_pred             hhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceec
Q 009414          392 VVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAP  471 (535)
Q Consensus       392 tlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~  471 (535)
                      +||++|+++..  +|.+.+|++++||.||||+.|.++.+++|+|  +|+||++|+||||++++ .       ..+..++|
T Consensus       261 ~lRl~p~~~~~--~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~-~-------~~~~~~~~  328 (389)
T 1n97_A          261 ALRLYPPAWIL--TRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER-G-------TPSGRYFP  328 (389)
T ss_dssp             HHHHSCSSCCE--EEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSC-C-------CCBTTBCT
T ss_pred             HHhcCCCcccc--ceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCC-C-------CCCCCccC
Confidence            99999999986  8999999999999999999999999999999  99999999999998641 0       13467999


Q ss_pred             cCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEeccC
Q 009414          472 FGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR  535 (535)
Q Consensus       472 Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  535 (535)
                      ||.|+|.|+|++||++|++++++.|+++|++++.++.+.    ..+.+..|+++++|++++|.|
T Consensus       329 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~----~~~~~~~p~~~~~v~~~~~~~  388 (389)
T 1n97_A          329 FGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRV----LAQVTLRPEGGLPARPREEVR  388 (389)
T ss_dssp             TCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCE----EESSSEEETTCCEECCBC---
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCcc----cceEEeeeCCCceEEEeeccc
Confidence            999999999999999999999999999999998875442    456778888899999998864


No 29 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=2.6e-63  Score=491.14  Aligned_cols=401  Identities=17%  Similarity=0.188  Sum_probs=321.8

Q ss_pred             CCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC-CCCCCCCchh-hhhhhhc
Q 009414           70 IPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS-SVFADRPVKE-SAYSLMF  147 (535)
Q Consensus        70 ~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~~~~~-~~~~~~~  147 (535)
                      ||||   |++||++.+..+++.++.+++++|+ ||||++++++.+++++++|+.++ ++.+ ..|++++... .....++
T Consensus         4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~-gpv~~~~~~g~~~~vv~~~~~~~-~l~~~~~f~~~~~~~~~~~~~~~   78 (415)
T 3awm_A            4 TPHT---KGPDETLSLLADPYRFISRQCQRLG-ANAFESRFLLKKTNCLKGAKAAE-IFYDTTRFEREGAMPVAIQKTLL   78 (415)
T ss_dssp             --------CCCCHHHHHHSTTTHHHHHHHHHT-SSEEEEEETTEEEEEEESHHHHH-HHTCTTTEECTTCSCHHHHTTTS
T ss_pred             CCCC---CccchHHHHHhChHHHHHHHHHHhC-CCeEEEecCCCcEEEEeCHHHHH-HHhcccccccccccchhhhhhcc
Confidence            7887   8999999988889999999999996 69999999988999999999997 5554 5676654332 1223345


Q ss_pred             c-cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHhcccc
Q 009414          148 N-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKY  226 (535)
Q Consensus       148 g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~  226 (535)
                      | .++ +..+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.|.+  ++++|+.+++..+++++++.+ ||.++
T Consensus        79 g~~~l-~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~~~~--~~~vdl~~~~~~~~~~vi~~~-~G~~~  153 (415)
T 3awm_A           79 GQGGV-QGLDGETHRHRKQMF-MGLMTPERVRALAQLFEAEWRRAVPGWTR--KGEIVFYDELHEPLTRAVCAW-AGVPL  153 (415)
T ss_dssp             CSSSG-GGCCHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHHHH--HSEEEHHHHHHHHHHHHHHHH-HTCCC
T ss_pred             CCcce-eecCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhhcc--CCcEeHHHHHHHHHHHHHHHH-cCCCC
Confidence            5 444 445999999999999 68999999999999999999999999976  457999999999999999998 89876


Q ss_pred             cccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcH
Q 009414          227 ALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDF  306 (535)
Q Consensus       227 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~  306 (535)
                      +.      .+..++.+.+.......         ++   +  ....++..++.+.+.+++.+.|++++++......+ |+
T Consensus       154 ~~------~~~~~~~~~~~~~~~~~---------~~---~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~-d~  212 (415)
T 3awm_A          154 PD------DEAGNRAGELRALFDAA---------GS---A--SPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSG-TA  212 (415)
T ss_dssp             CG------GGHHHHHHHHHHHHHST---------TC---S--SHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCTT-SH
T ss_pred             Cc------chHHHHHHHHHHHHHHh---------cc---c--CchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC-CH
Confidence            54      12333433333333211         11   0  11234566778889999999999988764322333 99


Q ss_pred             HHHHhccCCC--CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCc
Q 009414          307 VDVLLSLSGP--DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVY  384 (535)
Q Consensus       307 l~~ll~~~~~--~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~  384 (535)
                      ++.|++..++  ..++++++..++..++ ||++||+++++|++++|++||++|++||+|                  +||
T Consensus       213 l~~ll~~~~~~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e------------------~~~  273 (415)
T 3awm_A          213 AYAIAWHRDRHDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ------------------PDY  273 (415)
T ss_dssp             HHHHHHCBCTTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC------------------TTH
T ss_pred             HHHHHhhhhccCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH------------------HHH
Confidence            9999986543  2488888877776554 999999999999999999999999999987                  589


Q ss_pred             hhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccC
Q 009414          385 LPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMG  464 (535)
Q Consensus       385 l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~  464 (535)
                      |+|||+|+||++|+++.+  .|.+.+|++++|+.||||+.|.++.+++|+||++|+||++|+|+||++.+         .
T Consensus       274 l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~---------~  342 (415)
T 3awm_A          274 AELFVQEVRRFYPFFPAV--VARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWD---------E  342 (415)
T ss_dssp             HHHHHHHHHHHSCCSCEE--EEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCC---------C
T ss_pred             HHHHHHHHhhcCCCcccc--ceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCC---------C
Confidence            999999999999999986  89999999999999999999999999999999999999999999998643         1


Q ss_pred             CCCceeccCCC----CCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCccccccccccccCceeEEEEec
Q 009414          465 SDLRLAPFGSG----RRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR  533 (535)
Q Consensus       465 ~~~~~~~Fg~G----~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  533 (535)
                      ....|+|||.|    +|.|+|++||++|++++++.|+++|++++.+++ ..+. ...++..|++++.|++++.
T Consensus       343 ~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~~~~-~~~~~~~p~~~~~~~~~~~  413 (415)
T 3awm_A          343 DSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD-LSID-FARLPALPKSGFVMRNVHI  413 (415)
T ss_dssp             CSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCC-CCBC-TTSSSCCBTTCCEEEEEES
T ss_pred             CCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCC-CCcC-cCCCccccCCCceEEEEeC
Confidence            34679999999    599999999999999999999999999987642 2222 3457778989999999864


No 30 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=1.3e-65  Score=518.06  Aligned_cols=435  Identities=14%  Similarity=0.168  Sum_probs=307.7

Q ss_pred             CCCCCCCCCC-CCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCC-CCCCCchhhhh
Q 009414           66 CSKPIPGPRG-LPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSV-FADRPVKESAY  143 (535)
Q Consensus        66 ~~~~~PgP~~-~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~-~~~~~~~~~~~  143 (535)
                      ..+.||||++ +|++||++.+..+++.++.+++++|  |+||++++|+.++++|+||+.+++++++.. ++.++......
T Consensus        16 ~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~y--G~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~   93 (475)
T 3b98_A           16 RRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKH--GDIFTVRAAGLYITVLLDSNCYDAVLSDVASLDQTSYAQVLM   93 (475)
T ss_dssp             CTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHH--CSEEEEEETTEEEEEECCTTTHHHHHTCTTTEESHHHHHHHH
T ss_pred             CCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHh--CCeEEEEECCceEEEEeCHHHHHHHHcCcccCCchHHHHHHH
Confidence            3567999998 9999999998778999999999999  999999999999999999999999998643 44433222223


Q ss_pred             hhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhC-C---CceeHHHHHHHHHHHHHHH
Q 009414          144 SLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYG-G---SAFRLRDILKPASLNNMMC  219 (535)
Q Consensus       144 ~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~-~---~~vdl~~~~~~~~~~vi~~  219 (535)
                      ...+|.++++. +|+.|   |+++ .+.|+++.++.+.+.+.+.+.++++.+...+ .   ..+++..++..+++++++.
T Consensus        94 ~~~~g~~~~~~-~~~~~---R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (475)
T 3b98_A           94 KRIFNMILPSH-NPESE---KKRA-EMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYL  168 (475)
T ss_dssp             HHTTCCCCTTC-CHHHH---HHHH-HHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCC-ChHHH---HHHH-HHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhhh
Confidence            33456555433 66655   5666 5689999999999999999998887764322 1   1457777777777777777


Q ss_pred             HHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccc-cchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 009414          220 SVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLAD-FDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQT  298 (535)
Q Consensus       220 ~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  298 (535)
                      ..||.+.     .+.....++...+....         +.+|++.+ +.+....+...++.+.+.+.+.   +++.   +
T Consensus       169 ~~~g~~~-----~~~~~~~~~~~~~~~~~---------~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~  228 (475)
T 3b98_A          169 TVFGAEN-----NNSAALTQIYEEFRRFD---------KLLPKLARTTVNKEEKQIASAAREKLWKWLT---PSGL---D  228 (475)
T ss_dssp             HHHCCTT-----SCHHHHHHHHHHHHHHH---------HHHHHHHTTCCCHHHHHHHHHHHHHHHHHHS---CTTS---C
T ss_pred             heeCCcc-----ccchhcHHHHHHHHHHH---------hhhHHHHHHhcChhhhHHHHHHHHHHHHHHH---HHHh---h
Confidence            7777431     11122223322222211         12333211 1111222233333333222221   1111   1


Q ss_pred             CCCCCCcHHHHHhccCC-CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChh
Q 009414          299 SLQRNSDFVDVLLSLSG-PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTES  377 (535)
Q Consensus       299 ~~~~~~d~l~~ll~~~~-~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~  377 (535)
                      ..+...|+++.+++..+ ++.++++++. +++.+++||+|||+++++|++++|++||++|++||+|++  .+ ...++++
T Consensus       229 ~~~~~~d~l~~ll~~~~~~~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~--~~-~~~~~~~  304 (475)
T 3b98_A          229 RKPREQSWLGSYVKQLQDEGIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--GG-KHLRLEE  304 (475)
T ss_dssp             CCCCTTSHHHHHHHHHHHTTCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC------------
T ss_pred             ccccccHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh--cC-CCCCCHH
Confidence            11233499999987543 2357788888 999999999999999999999999999999999999998  23 3456999


Q ss_pred             hccCCCchhHHHHhhhcCCCCCCccccccccccccee-----cCeeeCCCCEEEEehhh-hhcCCCCCCCCCCCCCCccC
Q 009414          378 DLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTV-----DHYHVPAGTTAMVNIWA-IMRDPEIYADPLKFMPERFV  451 (535)
Q Consensus       378 ~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~-----~g~~ip~G~~v~~~~~~-~~~d~~~~~~p~~F~P~R~l  451 (535)
                      ++++||||+|||+|+||++|+ +.+  +|.+.+|+++     +||.||||+.|.++.++ +|+||++|+||++|+|+||+
T Consensus       305 ~~~~lpyl~a~i~E~lRl~p~-~~~--~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl  381 (475)
T 3b98_A          305 RQKNTPVFDSVLWETLRLTAA-ALI--TRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFL  381 (475)
T ss_dssp             ---CCHHHHHHHHHHHHHHEE-ECE--EEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTB
T ss_pred             HHhcCHHHHHHHHHHHhcCCc-cce--eEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhc
Confidence            999999999999999999986 655  8999999999     88999999999999999 99999999999999999999


Q ss_pred             CCCCCCc-ccc--ccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCC--CCCccc-ccc-ccccccC
Q 009414          452 NPEAADM-DIS--LMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYD--PVDLSE-VLR-LSCEMKN  524 (535)
Q Consensus       452 ~~~~~~~-~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~-~~~-~~~~~~~  524 (535)
                      +++.... +..  .......|+|||+|+|+|+|++||++|++++++.||++|++++.++.  ..+++. ..+ .+..|+.
T Consensus       382 ~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~  461 (475)
T 3b98_A          382 NADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAG  461 (475)
T ss_dssp             CTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSS
T ss_pred             CCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCC
Confidence            7542210 000  00134679999999999999999999999999999999999998763  222222 223 3567778


Q ss_pred             ceeEEEEecc
Q 009414          525 PLTVRVHARR  534 (535)
Q Consensus       525 ~~~v~~~~r~  534 (535)
                      ++.|++++|+
T Consensus       462 ~~~~~~~~R~  471 (475)
T 3b98_A          462 DLEIRYRIRF  471 (475)
T ss_dssp             CCEEEEEEC-
T ss_pred             CceEEEEecc
Confidence            9999999986


No 31 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=1.3e-62  Score=483.45  Aligned_cols=383  Identities=18%  Similarity=0.231  Sum_probs=311.2

Q ss_pred             CCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEE----e-CC-eeEEEecCHHHHHHHh-cCCCCCCCCch
Q 009414           67 SKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFS----L-GE-TRVIITCSPDVAKEIL-NSSVFADRPVK  139 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~----~-g~-~~~vvv~dp~~i~~i~-~~~~~~~~~~~  139 (535)
                      .+.||||+++|+.     +..+++..+.++ ++|  |+|++++    + |+ .++++|+||+.+++|+ .+..+++++..
T Consensus         9 ~~lppgp~~~p~~-----~~~~p~~~~~~l-~~y--Gpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~~~~~~~~   80 (406)
T 1ued_A            9 APLLREPANFQLR-----TNCDPHEDNFGL-RAH--GPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEHFTTRPQF   80 (406)
T ss_dssp             CCEEECCTTTTCE-----ETTEECHHHHHH-HTT--CSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSSEECCCCC
T ss_pred             CCCcccCcccCCC-----CCCCcHHHHHHH-HHh--CCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCccccccccc
Confidence            4468999999987     567889999999 999  9999999    7 88 8999999999999999 66566665432


Q ss_pred             hh----hhh-hhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHH-HH
Q 009414          140 ES----AYS-LMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKP-AS  213 (535)
Q Consensus       140 ~~----~~~-~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~-~~  213 (535)
                      ..    ... ...+.++++ .+|+.|+++|+.+ .+.|+++.++.+.+.++++++++++.+.+ .++++|+.+++.. ++
T Consensus        81 ~~~~~~~~~~~~~~~~l~~-~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~  157 (406)
T 1ued_A           81 TQSKSGAHVEAQFVGQIST-YDPPEHTRLRKML-TPEFTVRRIRRMEPAIQSLIDDRLDLLEA-EGPSADLQGLFADPVG  157 (406)
T ss_dssp             ---------CGGGTTCGGG-CCTTHHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHH-HCTTEEHHHHTHHHHH
T ss_pred             ccccccccccccccccccc-CCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeeHHHHHHHHhH
Confidence            11    110 112345544 4999999999999 68999999999999999999999999975 3568999998765 99


Q ss_pred             HHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHH
Q 009414          214 LNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEH  293 (535)
Q Consensus       214 ~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  293 (535)
                      +++++ .+||.+.+        ....+.......+.    .       .   . .   .++..++.+.+.+++.+.|+++
T Consensus       158 ~~vi~-~~~G~~~~--------~~~~~~~~~~~~~~----~-------~---~-~---~~~~~~~~~~~~~~~~~~i~~r  210 (406)
T 1ued_A          158 AHALC-ELLGIPRD--------DQREFVRRIRRNAD----L-------S---R-G---LKARAADSAAFNRYLDNLLARQ  210 (406)
T ss_dssp             HHHHH-HHHTCCHH--------HHHHHHHHHHHCC-----------------C-C---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHcCCCHH--------HHHHHHHHHHHHHh----c-------c---C-C---HHHHHHHHHHHHHHHHHHHHHH
Confidence            99999 57997632        12233333322211    0       0   1 0   1345667778889999999988


Q ss_pred             HHhhcCCCCCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCC
Q 009414          294 RTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRP  373 (535)
Q Consensus       294 ~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  373 (535)
                      +++.    . .|+++.|++.. +.+++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++        
T Consensus       211 ~~~~----~-~d~l~~ll~~~-~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~--------  276 (406)
T 1ued_A          211 RADP----D-DGLLGMIVRDH-GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE--------  276 (406)
T ss_dssp             HHSC----C-SSHHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH--------
T ss_pred             HhCC----C-CCHHHHHHHhc-CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH--------
Confidence            7642    2 39999999865 44689999999999999999999999999999999999999999999975        


Q ss_pred             CChhhccCCCchhHHHHhhhcCCCCCCc-ccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCC
Q 009414          374 LTESDLQSMVYLPAVVKEVVRLHPPGPL-LSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVN  452 (535)
Q Consensus       374 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~-~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  452 (535)
                                ||+|||+|+||++|+++. +  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||- 
T Consensus       277 ----------~l~a~i~E~lRl~p~~~~~~--~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~-  343 (406)
T 1ued_A          277 ----------KAERVVNELVRYLSPVQAPN--PRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRAA-  343 (406)
T ss_dssp             ----------HHHHHHHHHHHHHCSSCSCS--CEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC-
T ss_pred             ----------HHHHHHHHHHhcCCCcccCc--ceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCCC-
Confidence                      589999999999999996 5  89999999999999999999999999999999999999999999981 


Q ss_pred             CCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEE
Q 009414          453 PEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRV  530 (535)
Q Consensus       453 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  530 (535)
                                    ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ +.++....+.+.++ ++++|++
T Consensus       344 --------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          344 --------------VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVP-IEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             --------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC-GGGCCBCCSSSCCB-SCCEEEC
T ss_pred             --------------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCC-cccccccccccccC-CeeeeeC
Confidence                          3589999999999999999999999999999999 7998753 12333444566677 8888863


No 32 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=1.5e-61  Score=476.80  Aligned_cols=366  Identities=15%  Similarity=0.185  Sum_probs=295.8

Q ss_pred             CCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeC-CeeEEEecCHHHHHHHhcCCCC---CCCCchhhhh-
Q 009414           69 PIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLG-ETRVIITCSPDVAKEILNSSVF---ADRPVKESAY-  143 (535)
Q Consensus        69 ~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g-~~~~vvv~dp~~i~~i~~~~~~---~~~~~~~~~~-  143 (535)
                      .||||+++|++|++..   +++..+.+++ +|  |+|++++++ +...++|++++.+++++.+..+   ..++...... 
T Consensus         2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~--Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~   75 (404)
T 1jfb_A            2 MASGAPSFPFSRASGP---EPPAEFAKLR-AT--NPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSA   75 (404)
T ss_dssp             ----CCBSSCCCSSTT---SCCTHHHHHH-HH--CSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSH
T ss_pred             CCCCCCCCCCCCCcCC---CccHHHHHHH-Hh--CCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccc
Confidence            3899999999999765   7888899986 69  999999874 5666789999999999986432   2333221111 


Q ss_pred             ---hhhcc-cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhC--CCceeHHHHHHHHHHHHH
Q 009414          144 ---SLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYG--GSAFRLRDILKPASLNNM  217 (535)
Q Consensus       144 ---~~~~g-~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~--~~~vdl~~~~~~~~~~vi  217 (535)
                         ....+ .++++ .+|+.|+++|+.+ .+.|++++++.+.+.++++++++++.+.+.+  ++++|+.+.+...+.+++
T Consensus        76 ~~~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i  153 (404)
T 1jfb_A           76 SGKQAAKAKPTFVD-MDPPEHMHQRSMV-EPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYI  153 (404)
T ss_dssp             HHHHHTTSCCCGGG-CCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHH
T ss_pred             cccchhcccCcccc-cCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHH
Confidence               11223 34444 4899999999999 7899999999999999999999999998653  467999999999999999


Q ss_pred             HHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhh
Q 009414          218 MCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQ  297 (535)
Q Consensus       218 ~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  297 (535)
                      +..+||.+++.         .++.........           .+.   +   ..+...++.+.+.+++.+.|++++++.
T Consensus       154 ~~~~~G~~~~~---------~~~~~~~~~~~~-----------~~~---~---~~~~~~~~~~~~~~~~~~~i~~r~~~~  207 (404)
T 1jfb_A          154 IYTLLGVPFND---------LEYLTQQNAIRT-----------NGS---S---TAREASAANQELLDYLAILVEQRLVEP  207 (404)
T ss_dssp             HHHHHTCCGGG---------HHHHHHHHHHHH-----------CTT---S---CHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHcCCCHHH---------HHHHHHHHHHHh-----------ccC---c---chHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999987643         112221111110           010   0   113455667788899999998887642


Q ss_pred             cCCCCCCcHHHHHhccC-CCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCCh
Q 009414          298 TSLQRNSDFVDVLLSLS-GPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTE  376 (535)
Q Consensus       298 ~~~~~~~d~l~~ll~~~-~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~  376 (535)
                          . .|+++.|++.. ++++++++++.+++..+++||+|||+++++|++++|++||++|++||+|             
T Consensus       208 ----~-~d~l~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~-------------  269 (404)
T 1jfb_A          208 ----K-DDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN-------------  269 (404)
T ss_dssp             ----C-SSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC-------------
T ss_pred             ----C-CcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC-------------
Confidence                2 39999999643 3446999999999999999999999999999999999999999999982             


Q ss_pred             hhccCCCchhHHHHhhhcCCCCCC-cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCC
Q 009414          377 SDLQSMVYLPAVVKEVVRLHPPGP-LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEA  455 (535)
Q Consensus       377 ~~l~~lp~l~a~i~EtlRl~~~~~-~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~  455 (535)
                           .+||+|||+|+||++|+++ .+  +|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||+++  
T Consensus       270 -----~~yl~a~i~E~lRl~p~~~~~~--~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~--  340 (404)
T 1jfb_A          270 -----PSLAPQFVEELCRYHTASALAI--KRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP--  340 (404)
T ss_dssp             -----GGGHHHHHHHHHHHSCSCCSCC--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS--
T ss_pred             -----hHhHHHHHHHHHhhCCCccccc--eeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC--
Confidence                 2699999999999999999 45  8999999999999999999999999999999999999999999998743  


Q ss_pred             CCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecC
Q 009414          456 ADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSD  506 (535)
Q Consensus       456 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~  506 (535)
                                 ..++|||.|+|.|+|++||++|++++++.|+++| ++++.+
T Consensus       341 -----------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~  381 (404)
T 1jfb_A          341 -----------QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAV  381 (404)
T ss_dssp             -----------SCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred             -----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecC
Confidence                       2489999999999999999999999999999999 799865


No 33 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=7.2e-62  Score=479.36  Aligned_cols=388  Identities=18%  Similarity=0.206  Sum_probs=309.5

Q ss_pred             CCCCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC-CCCCCCCchhhhh
Q 009414           65 ACSKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS-SVFADRPVKESAY  143 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~~~~~~~~  143 (535)
                      +++..+|||+.          ..+++.++.++++ |  |||   ++++.++++|+||+.+++++.+ ..|++++... ..
T Consensus        16 ~pl~~~PGp~~----------~~~p~~~~~~l~~-~--gpv---~~~~~~~~vv~~~~~v~~vl~~~~~f~~~~~~~-~~   78 (411)
T 2jjn_A           16 TTIDEVPGMAD----------ETALLDWLGTMRE-K--QPV---WQDRYGVWHVFRHADVQTVLRDTATFSSDPTRV-IE   78 (411)
T ss_dssp             -CCCSCCCSSC----------HHHHHHHHHHHHH-H--CSE---EECTTSCEEECSHHHHHHHHHCTTTEESCGGGG-ST
T ss_pred             CCCCCCCCccc----------ccChHHHHHHHHH-h--CCc---ccCCCCeEEECCHHHHHHHHcCcccccCccccc-CC
Confidence            45777899861          2578889999976 8  898   6777778999999999999986 3577765422 11


Q ss_pred             hh-hcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHHHHHHHHH
Q 009414          144 SL-MFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLR-DILKPASLNNMMCSV  221 (535)
Q Consensus       144 ~~-~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~-~~~~~~~~~vi~~~~  221 (535)
                      .. ..+.++++ .+|+.|+++|+.+ .+.|+++.++.+.+.+++.++++++.    .++++|+. ++...+++++++.+ 
T Consensus        79 ~~~~~~~~~~~-~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~----~~~~~d~~~~~~~~~~~~vi~~~-  151 (411)
T 2jjn_A           79 GASPTPGMIHE-IDPPEHRALRKVV-SSAFTPRTISDLEPRIRDVTRSLLAD----AGESFDLVDVLAFPLPVTIVAEL-  151 (411)
T ss_dssp             TCCCCTTCGGG-CCTTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHT----SCSEEEHHHHTTTHHHHHHHHHH-
T ss_pred             ccccccccccc-CCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHhc----CCCceeHHHHHHHHHHHHHHHHH-
Confidence            11 22345544 4899999999999 68999999999999999999999988    24589998 45578999999998 


Q ss_pred             hcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCC
Q 009414          222 FGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQ  301 (535)
Q Consensus       222 fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  301 (535)
                      ||.+.+...     ...+   ....+....        .|.+  + +....++..++.+.+.+++.+.|++++++    .
T Consensus       152 fG~~~~~~~-----~~~~---~~~~~~~~~--------~~~~--~-~p~~~~~~~~~~~~~~~~~~~~i~~r~~~----~  208 (411)
T 2jjn_A          152 LGLPPMDHE-----QFGD---WSGALVDIQ--------MDDP--T-DPALAERIADVLNPLTAYLKARCAERRAD----P  208 (411)
T ss_dssp             HTCCSCCCS-----TTCC---HHHHHHHSC--------CSCT--T-CHHHHHHHHHHHHHHHHHHHHHHHHHHHS----C
T ss_pred             cCCCHHHHH-----HHHH---HHHHHHhcc--------Cccc--c-chHHHHHHHHHHHHHHHHHHHHHHHHHhC----C
Confidence            998865411     1111   222222211        1111  1 12334456677888899999999988763    2


Q ss_pred             CCCcHHHHHhccCCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhcc
Q 009414          302 RNSDFVDVLLSLSGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQ  380 (535)
Q Consensus       302 ~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~  380 (535)
                      . .|+++.|++...+ .+++++++.+++..+++||+|||+++++|++++|++||++|+++++|++               
T Consensus       209 ~-~d~l~~ll~~~~~~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------  272 (411)
T 2jjn_A          209 G-DDLISRLVLAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG---------------  272 (411)
T ss_dssp             C-SSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG---------------
T ss_pred             C-CCHHHHHHhcccCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------
Confidence            2 3999999987533 3699999999999999999999999999999999999999999999975               


Q ss_pred             CCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccc
Q 009414          381 SMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDI  460 (535)
Q Consensus       381 ~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~  460 (535)
                         ||+|||+|+||++|+++..  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||.+        
T Consensus       273 ---~l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~--------  339 (411)
T 2jjn_A          273 ---RIPAIVEEVLRYRPPFPQM--QRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG--------  339 (411)
T ss_dssp             ---GHHHHHHHHHHHSCSSCEE--EEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS--------
T ss_pred             ---hHHHHHHHHhhhCCCcCCc--ceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC--------
Confidence               8999999999999999975  899999999999999999999999999999999999999999999742        


Q ss_pred             cccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcce-eeecCCCCCCccccccccccccCceeEEEEeccC
Q 009414          461 SLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFK-WVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR  535 (535)
Q Consensus       461 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  535 (535)
                           ...++|||.|+|.|+|++||++|++++++.|+++|+ +++.+.  .+++...+.......+++|++++|.|
T Consensus       340 -----~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~lpv~~~~~~r  408 (411)
T 2jjn_A          340 -----GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRD--DERLRHFEQIVLGTRHLPVLAGSSPR  408 (411)
T ss_dssp             -----SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCS--SCCCCBCCSSSSSBSCCEEECSCCTT
T ss_pred             -----CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCC--CceeccccccccCcceeEEEecCCCC
Confidence                 125899999999999999999999999999999996 999752  23321334455667899999998875


No 34 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=1.4e-61  Score=480.01  Aligned_cols=400  Identities=17%  Similarity=0.177  Sum_probs=310.3

Q ss_pred             CCCCCCCCCCCccccccccC-----CChhHHHHHHHHHhcCcceEEEEe-CCeeEEEecCHHHHHHHhcC-CCCCCCCc-
Q 009414           67 SKPIPGPRGLPFIGSMSLMT-----NLPHHNLAAAAEAYKAKRVMAFSL-GETRVIITCSPDVAKEILNS-SVFADRPV-  138 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~-----~~~~~~l~~~~~ky~~G~v~~~~~-g~~~~vvv~dp~~i~~i~~~-~~~~~~~~-  138 (535)
                      .+.|||     ++|++....     .+++..+.++++ |  |||+++++ |+.++++|+||+.+++++++ ..|++++. 
T Consensus         5 ~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~--gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~~fs~r~~~   76 (428)
T 1cpt_A            5 ATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-E--QPLAMAHIEGYDPMWIATKHADVMQIGKQPGLFSNAEGS   76 (428)
T ss_dssp             CCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-H--CSEEEECCTTSCCEEEECSHHHHHHHHHCTTTEESSSSC
T ss_pred             cccchh-----hhcccCChhhhcccCCccHHHHHHHH-h--CCeeeccccCCCCeEEEccHHHHHHHHcCchhccCcccc
Confidence            345888     899865543     357888988876 7  89999998 78889999999999999985 45777664 


Q ss_pred             hhhh--hh-h-h---cc------cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeH
Q 009414          139 KESA--YS-L-M---FN------RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRL  205 (535)
Q Consensus       139 ~~~~--~~-~-~---~g------~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl  205 (535)
                      ....  .. . +   .|      .++++ .+|+.|+++|+++ .+.|+++.++.+.+.++++++++++.+.+. ++.+|+
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~-~~g~~~~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~d~  153 (428)
T 1cpt_A           77 EILYDQNNEAFMRSISGGCPHVIDSLTS-MDPPTHTAYRGLT-LNWFQPASIRKLEENIRRIAQASVQRLLDF-DGECDF  153 (428)
T ss_dssp             SSCCCHHHHHHHHHHTTTSSCSSCCGGG-CCTTHHHHHHHHH-HTTSSHHHHGGGHHHHHHHHHHHHHHHHTS-SSEEEH
T ss_pred             ccCCcccccchhcccccccccccccccc-CChHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHHh-CCCeeh
Confidence            2111  01 1 1   22      34544 4899999999999 689999999999999999999999999763 357999


Q ss_pred             HH-HHHHHHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHH
Q 009414          206 RD-ILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNR  284 (535)
Q Consensus       206 ~~-~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~  284 (535)
                      .+ +...+++++++.+ ||.+++.        ...+.+..........  .....+|++..+. ....++..++.+.+.+
T Consensus       154 ~~~~~~~~~~~vi~~~-fG~~~~~--------~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~  221 (428)
T 1cpt_A          154 MTDCALYYPLHVVMTA-LGVPEDD--------EPLMLKLTQDFFGVHE--PDEQAVAAPRQSA-DEAARRFHETIATFYD  221 (428)
T ss_dssp             HHHTTTTHHHHHHHHH-HTCCGGG--------HHHHHHHHHTTTCC-------------------CHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhHHHHHHHH-cCCCHhH--------HHHHHHHHHHHHhccc--ccccccccccccc-hhhHHHHHHHHHHHHH
Confidence            85 4567999999999 9987643        2233333332221111  1112345544331 1223456677788889


Q ss_pred             HHHHHHHHHHHhhcCCCCCCcHHHHHhccCCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHH
Q 009414          285 FVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSE  363 (535)
Q Consensus       285 ~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~E  363 (535)
                      ++.+.|++++++    .. .|+++.|++...+ +.++++++.+++..+++||+|||+++++|++++|++||++|+++++|
T Consensus       222 ~~~~~i~~r~~~----~~-~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E  296 (428)
T 1cpt_A          222 YFNGFTVDRRSC----PK-DDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD  296 (428)
T ss_dssp             HHHHHHHHHTTS----CC-SSHHHHHHHCBSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC
T ss_pred             HHHHHHHHHHcC----CC-CcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHh
Confidence            999999887652    22 3999999987543 35999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCC
Q 009414          364 LDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPL  443 (535)
Q Consensus       364 i~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  443 (535)
                      ++                  |++|||+|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||+
T Consensus       297 ~~------------------~l~a~i~E~lRl~p~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~  356 (428)
T 1cpt_A          297 PA------------------LIPRLVDEAVRWTAPVKSF--MRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPD  356 (428)
T ss_dssp             GG------------------GHHHHHHHHHHHHCCBCCC--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTT
T ss_pred             HH------------------HHHHHHHHHHHhCCccccc--ceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChh
Confidence            75                  8999999999999999976  899999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcce-eeecCCCCCCccccccccccc
Q 009414          444 KFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFK-WVQSDYDPVDLSEVLRLSCEM  522 (535)
Q Consensus       444 ~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~  522 (535)
                      +|+||||.+               .++|||.|+|.|+|++||++|++++++.|+++|+ +++.+ + ..+  ........
T Consensus       357 ~F~PeR~~~---------------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~-~~~--~~~~~~~~  417 (428)
T 1cpt_A          357 EFDITRFPN---------------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSG-P-PRL--VATNFVGG  417 (428)
T ss_dssp             SCCTTCCSC---------------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESS-C-CEE--CCCSSBCS
T ss_pred             hcCCCCCCC---------------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCC-C-ccc--ccCccccC
Confidence            999999841               3899999999999999999999999999999997 78764 2 222  22223344


Q ss_pred             cCceeEEEEec
Q 009414          523 KNPLTVRVHAR  533 (535)
Q Consensus       523 ~~~~~v~~~~r  533 (535)
                      ..+++|+++||
T Consensus       418 ~~~lpv~~~p~  428 (428)
T 1cpt_A          418 PKNVPIRFTKA  428 (428)
T ss_dssp             EEECEEEEEEC
T ss_pred             cceeeEEeeCC
Confidence            47889999876


No 35 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=9.3e-61  Score=469.83  Aligned_cols=376  Identities=15%  Similarity=0.185  Sum_probs=307.8

Q ss_pred             ccCCChhHHHHHHHHHhcCcceEEEEe-CCeeEEEecCHHHHHHHhcCCCCCCCCc--h-hh---hhhhhcccceeeCcC
Q 009414           84 LMTNLPHHNLAAAAEAYKAKRVMAFSL-GETRVIITCSPDVAKEILNSSVFADRPV--K-ES---AYSLMFNRAIGFAPY  156 (535)
Q Consensus        84 ~~~~~~~~~l~~~~~ky~~G~v~~~~~-g~~~~vvv~dp~~i~~i~~~~~~~~~~~--~-~~---~~~~~~g~~~~~~~~  156 (535)
                      .+..+++..+.++ ++|  |+|+++++ |+.++++|+||+.+++|+.+..|++++.  . ..   ......+.++++ .+
T Consensus        16 ~~~~~p~~~~~~l-~~y--Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~-~~   91 (403)
T 3aba_A           16 SCPFLPPDGIADI-RAA--APVTRATFTSGHEAWLVTGYEEVRALLRDSSFSVQVPHALHTQDGVVTQKPGRGSLLW-QD   91 (403)
T ss_dssp             SSTTSCCTTHHHH-HHH--CSEEEEECTTSCEEEEECCHHHHHHHHHCTTEESCCSCCTTSSSCCCCCCCCTTCCTT-CC
T ss_pred             ccccChhHHHHHH-Hhc--CCeeeeccCCCceEEEEcCHHHHHHHHcCCCccccccccccccccccccccccccccc-CC
Confidence            3556888899999 899  99999997 8999999999999999998766777642  1 11   111123456544 59


Q ss_pred             ChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCCch
Q 009414          157 GVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSSNT  235 (535)
Q Consensus       157 g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~~~  235 (535)
                      |+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+ .++++|+.+.+ ..+++++++. +||.+.+.       
T Consensus        92 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-------  161 (403)
T 3aba_A           92 EPEHTSDRKLL-AKEFTVRRMQALRPNIQRIVDEHLDAIEA-RGGPVDLVKTFANAVPSMVISD-LFGVPVER-------  161 (403)
T ss_dssp             TTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-------
T ss_pred             chhHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH-------
Confidence            99999999999 68899999999999999999999999984 35689998665 5799999997 79987543       


Q ss_pred             HHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCC
Q 009414          236 EARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSG  315 (535)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~  315 (535)
                       ...+..........   .     .+      +    ++..++.+.+.+++.+.|++++++.    .+ |+++.|++..+
T Consensus       162 -~~~~~~~~~~~~~~---~-----~~------p----~~~~~~~~~~~~~~~~~i~~r~~~~----~~-dll~~ll~~~~  217 (403)
T 3aba_A          162 -RAEFQDIAEAMMRV---D-----QD------A----AATEAAGMRLGGLLYQLVQERRANP----GD-DLISALITTED  217 (403)
T ss_dssp             -HHHHHHHHHHHSBS---S-----SC------H----HHHHHHHHHHHHHHHHHHHHHHHSC----CS-SHHHHHHTSCC
T ss_pred             -HHHHHHHHHHHHhc---c-----Cc------H----HHHHHHHHHHHHHHHHHHHHHHhCC----CC-CHHHHHHhhcc
Confidence             22333333322210   0     00      1    4456677888899999999887642    23 99999998754


Q ss_pred             C-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhc
Q 009414          316 P-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVR  394 (535)
Q Consensus       316 ~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlR  394 (535)
                      + .+++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+|||+|+||
T Consensus       218 ~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lR  279 (403)
T 3aba_A          218 PDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS------------------LVGNAVEELLR  279 (403)
T ss_dssp             TTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHh
Confidence            3 3699999999999999999999999999999999999999999999963                  79999999999


Q ss_pred             CCCCCC-cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccC
Q 009414          395 LHPPGP-LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFG  473 (535)
Q Consensus       395 l~~~~~-~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg  473 (535)
                      ++|+++ .+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||.               ..++|||
T Consensus       280 l~p~~~~~~--~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------------~~~l~FG  342 (403)
T 3aba_A          280 YLTIGQFGG--ERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP---------------APHLAFG  342 (403)
T ss_dssp             HHCSCTTCE--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC---------------CCCSTTC
T ss_pred             cCCCccccc--ceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC---------------CCccCCC
Confidence            999999 55  89999999999999999999999999999999999999999999982               2489999


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEec
Q 009414          474 SGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR  533 (535)
Q Consensus       474 ~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  533 (535)
                      .|+|.|+|++||++|++++++.|+++| ++++.++. .++....+...++.++++|++++|
T Consensus       343 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~~~lpv~~~~r  402 (403)
T 3aba_A          343 FGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPV-EELRFRHDMVFYGVHELPVTWHHH  402 (403)
T ss_dssp             CGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG-GGSCBCTTBSSCCBSCCEEECCCC
T ss_pred             CCCccCcCHHHHHHHHHHHHHHHHHhCCCceecCCc-cccccccCcccCCcceeEEEecCC
Confidence            999999999999999999999999999 58887641 222233455667779999999887


No 36 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=4.1e-61  Score=472.84  Aligned_cols=386  Identities=18%  Similarity=0.231  Sum_probs=308.8

Q ss_pred             CCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEe-CCee-EEEecCHHHHHHHhcCCCCCCCCchhhhh--
Q 009414           68 KPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSL-GETR-VIITCSPDVAKEILNSSVFADRPVKESAY--  143 (535)
Q Consensus        68 ~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~-g~~~-~vvv~dp~~i~~i~~~~~~~~~~~~~~~~--  143 (535)
                      +.+|+|+++|+.++   ...+++.++.+++ +|  |+|+++++ ++.+ +++|+||+.+++|+.+..|++++......  
T Consensus         8 ~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~--Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~   81 (406)
T 1s1f_A            8 QAVPPVRDWPAVDL---PGSDFDPVLTELM-RE--GPVTRISLPNGEGWAWLVTRHDDVRLVTNDPRFGREAVMDRQVTR   81 (406)
T ss_dssp             CCSCCEEECCCCCC---CTTCCCHHHHHHH-HH--CSEEEEECSBSBSCEEEECSHHHHHHHHTCTTEESTTTTTTTBCB
T ss_pred             hhccCCCCCCCCcc---cccCchHHHHHHH-hc--CCeeeeccCCCcccEEEEcCHHHHHHHHcCCCccCCcCCCCCccc
Confidence            45788888898877   4578899999985 79  99999996 6666 99999999999999977777765432111  


Q ss_pred             -hh-h--cccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHH
Q 009414          144 -SL-M--FNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMM  218 (535)
Q Consensus       144 -~~-~--~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~  218 (535)
                       .. .  .+.++++. +|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+ .++++|+.+.+ ..+++++++
T Consensus        82 ~~~~~~~~~~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~  158 (406)
T 1s1f_A           82 LAPHFIPARGAVGFL-DPPDHTRLRRSV-AAAFTARGVERVRERSRGMLDELVDAMLR-AGPPADLTEAVLSPFPIAVIC  158 (406)
T ss_dssp             SSSSCSSCTTSGGGC-CTTHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTHHHHHHHH
T ss_pred             ccccccccccccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHhhHhHHHHHH
Confidence             11 2  25666554 899999999999 67899999999999999999999999974 35689998666 579999999


Q ss_pred             HHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 009414          219 CSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQT  298 (535)
Q Consensus       219 ~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  298 (535)
                      . +||.+++.        ...+............        |      +    ++..++.+.+.+++.+.|++++++  
T Consensus       159 ~-~~G~~~~~--------~~~~~~~~~~~~~~~~--------~------~----~~~~~~~~~~~~~~~~~i~~r~~~--  209 (406)
T 1s1f_A          159 E-LMGVPATD--------RHSMHTWTQLILSSSH--------G------A----EVSERAKNEMNAYFSDLIGLRSDS--  209 (406)
T ss_dssp             H-HHTCCGGG--------HHHHHHHHHHHHHHHT--------T------C----CCCHHHHTHHHHHHHHHHHTSCCS--
T ss_pred             H-HhCCCHHH--------HHHHHHHHHHHHhccC--------C------H----HHHHHHHHHHHHHHHHHHHHHHhC--
Confidence            8 69987643        1233333333332110        1      0    122345566777888888766532  


Q ss_pred             CCCCCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhh
Q 009414          299 SLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESD  378 (535)
Q Consensus       299 ~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~  378 (535)
                         ...|+++.|++..++.+++++++.+++..+++|| |||+++++|++++|++||++|+++++|++             
T Consensus       210 ---~~~d~l~~ll~~~~~~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------  272 (406)
T 1s1f_A          210 ---AGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE-------------  272 (406)
T ss_dssp             ---CCCSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG-------------
T ss_pred             ---CCCCHHHHHHHhhcccCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------
Confidence               2239999999864335799999999999999999 99999999999999999999999999964             


Q ss_pred             ccCCCchhHHHHhhhcCCCCCC--cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCC
Q 009414          379 LQSMVYLPAVVKEVVRLHPPGP--LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAA  456 (535)
Q Consensus       379 l~~lp~l~a~i~EtlRl~~~~~--~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~  456 (535)
                           |++|||+|+||++|+++  .+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||.     
T Consensus       273 -----~l~a~i~E~lRl~p~~~~~~~--~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-----  340 (406)
T 1s1f_A          273 -----IRPRAIDELLRWIPHRNAVGL--SRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP-----  340 (406)
T ss_dssp             -----GHHHHHHHHHHHSCCBSSCCC--CEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC-------
T ss_pred             -----HHHHHHHHHHhhCCCccccCc--ceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC-----
Confidence                 79999999999999999  55  89999999999999999999999999999999999999999999984     


Q ss_pred             CccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEE
Q 009414          457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVH  531 (535)
Q Consensus       457 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  531 (535)
                                ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++. .++....+...+....++|++.
T Consensus       341 ----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~~~lpv~~~  405 (406)
T 1s1f_A          341 ----------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP-EDVPFKKGALIRGPEALPVTWH  405 (406)
T ss_dssp             ----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG-GGSCBCSSCSBCCBSCCEEECC
T ss_pred             ----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCC-ccceeccCcccCCcceeEEeeC
Confidence                      2479999999999999999999999999999999 79998752 1222233445566688888763


No 37 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=2.9e-60  Score=467.69  Aligned_cols=391  Identities=15%  Similarity=0.185  Sum_probs=309.4

Q ss_pred             CCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEe-CCeeEEEecCHHHHHHHhcCCCCCCCCchhhhhhh-
Q 009414           68 KPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSL-GETRVIITCSPDVAKEILNSSVFADRPVKESAYSL-  145 (535)
Q Consensus        68 ~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~-g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~-  145 (535)
                      ..||||+++|.+.....+..+++..+.++ ++| +|+|+++++ |+.++++|+||+.+++|+.+..+++++....+... 
T Consensus         5 ~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~-yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~   82 (412)
T 2zbx_A            5 ATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDT-PGPLHRVTLYDGRQAWVVTKHEAARKLLGDPRLSSNRTDDNFPATS   82 (412)
T ss_dssp             ---CCCCSSCBSSCCCSSTTSCCHHHHHH-HHS-SSSEEEEECTTSCEEEEECSHHHHHHHHTCTTEECCTTSTTSCCCS
T ss_pred             CCCCCCCCCCCCCCCchhccChHHHHHHH-Hhc-CCCeEeeccCCCCcEEEEecHHHHHHHHcCcccccCcccccccccc
Confidence            45788888886644455667899999999 555 289999998 88999999999999999986556555431111100 


Q ss_pred             -----h--cccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHH-HHHHHHH
Q 009414          146 -----M--FNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILK-PASLNNM  217 (535)
Q Consensus       146 -----~--~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~-~~~~~vi  217 (535)
                           .  .+.++++ .+|+.|+++|+.+ .+.|+++.++.+.+.+++.++++++.|.+ .++++|+.+.+. .++++++
T Consensus        83 ~~~~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi  159 (412)
T 2zbx_A           83 PRFEAVRESPQAFIG-LDPPEHGTRRRMT-ISEFTVKRIKGMRPEVEEVVHGFLDEMLA-AGPTADLVSQFALPVPSMVI  159 (412)
T ss_dssp             GGGC----CCCCGGG-CCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHH
T ss_pred             ccccccccccccccc-CCcHHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHH
Confidence                 1  2344544 5999999999999 68899999999999999999999999975 356899998876 4899999


Q ss_pred             HHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhh
Q 009414          218 MCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQ  297 (535)
Q Consensus       218 ~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  297 (535)
                      +. +||.+.+.        ...+.......+..          +      ..   ++..++.+.+.+++.+.|++++++.
T Consensus       160 ~~-~~G~~~~~--------~~~~~~~~~~~~~~----------~------~~---~~~~~~~~~~~~~~~~~i~~r~~~~  211 (412)
T 2zbx_A          160 CR-LLGVPYAD--------HEFFQDASKRLVQS----------T------DA---QSALTARNDLAGYLDGLITQFQTEP  211 (412)
T ss_dssp             HH-HHTCCGGG--------HHHHHHHHHHHHHC----------S------SH---HHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HH-HcCCCHHH--------HHHHHHHHHHHhcc----------C------cH---HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            96 79987543        22333333333220          0      01   4556677888899999999887642


Q ss_pred             cCCCCCCcHHHHHhccCC-CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCCh
Q 009414          298 TSLQRNSDFVDVLLSLSG-PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTE  376 (535)
Q Consensus       298 ~~~~~~~d~l~~ll~~~~-~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~  376 (535)
                          . .|+++.|++... +.+++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++           
T Consensus       212 ----~-~d~l~~ll~~~~~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-----------  275 (412)
T 2zbx_A          212 ----G-AGLVGALVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRS-----------  275 (412)
T ss_dssp             ----C-SSHHHHHHHTTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----------
T ss_pred             ----C-CCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChH-----------
Confidence                2 399999998754 34699999999999999999999999999999999999999999999853           


Q ss_pred             hhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCC
Q 009414          377 SDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAA  456 (535)
Q Consensus       377 ~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~  456 (535)
                             ||+|||+|+||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||.     
T Consensus       276 -------~l~a~i~E~lRl~p~~~~~~-~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-----  342 (412)
T 2zbx_A          276 -------LVPGAVEELLRYLAIADIAG-GRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSA-----  342 (412)
T ss_dssp             -------GHHHHHHHHHHHHCCCGGGC-EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC-----
T ss_pred             -------hHHHHHHHHHHhCCcccccc-ceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCCC-----
Confidence                   79999999999999999422 89999999999999999999999999999999999999999999971     


Q ss_pred             CccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEE
Q 009414          457 DMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVH  531 (535)
Q Consensus       457 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  531 (535)
                                ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++. .++....+...+....++|+..
T Consensus       343 ----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~g~~~lpv~~~  407 (412)
T 2zbx_A          343 ----------RHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPV-EQLVLRPGTTIQGVNELPVTWH  407 (412)
T ss_dssp             ----------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG-GGSCBCCTTSCCCBSCCEEECC
T ss_pred             ----------CCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCc-ccceeccccccCCcceeeeecc
Confidence                      3589999999999999999999999999999999 79987531 1222233333444466666543


No 38 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=1e-60  Score=470.33  Aligned_cols=390  Identities=12%  Similarity=0.103  Sum_probs=314.1

Q ss_pred             CCCCCCCCCCCCCCcc--ccccc-----cCCChhHHHHHHHHHhcCc--ceEEEE-eCCeeEEEecCHHHHHHHhcC-CC
Q 009414           64 KACSKPIPGPRGLPFI--GSMSL-----MTNLPHHNLAAAAEAYKAK--RVMAFS-LGETRVIITCSPDVAKEILNS-SV  132 (535)
Q Consensus        64 ~~~~~~~PgP~~~P~i--G~~~~-----~~~~~~~~l~~~~~ky~~G--~v~~~~-~g~~~~vvv~dp~~i~~i~~~-~~  132 (535)
                      .+..+.||||++.|..  +.+-.     +..+++.++.+|+ +|  |  +||+++ +|  ++++|+||+.+++|+++ ..
T Consensus         7 ~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~--G~~pv~~~~~~g--~~vvv~~~~~v~~vl~~~~~   81 (415)
T 2zwu_A            7 QSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ES--NVPDLVWTRCNG--GHWIATRGQLIREAYEDYRH   81 (415)
T ss_dssp             ----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-ST--TSCSEEEECGGG--CEEEECSHHHHHHHHHCTTT
T ss_pred             cCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hc--CCCCeEEecCCC--CeEEEcCHHHHHHHHcCccc
Confidence            4557789999999874  53322     2357889999996 78  8  999998 56  57999999999999985 45


Q ss_pred             CCCCC-chhhhhhhhcccc-eeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-
Q 009414          133 FADRP-VKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-  209 (535)
Q Consensus       133 ~~~~~-~~~~~~~~~~g~~-~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-  209 (535)
                      |++++ ..... ....+.+ +++. +|+.|+++|+.+ .+.|++..++.+.+.+.++++++++.+.+.  +.+|+.+.+ 
T Consensus        82 f~~~~~~~~~~-~~~~~~~~l~~~-~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--~~~d~~~~~~  156 (415)
T 2zwu_A           82 FSSECPFIPRE-AGEAYDFIPTSM-DPPEQRQFRALA-NQVVGMPVVDKLENRIQELACSLIESLRPQ--GQCNFTEDYA  156 (415)
T ss_dssp             EETTSCSSSHH-HHHHCCCTTTTC-CTTTTHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHGGG--TEEEHHHHTT
T ss_pred             cCCCcccCCCC-ccccccccCccC-CCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhc--CCccHHHHHH
Confidence            77776 22222 2223555 6544 899999999999 688999999999999999999999999763  479999754 


Q ss_pred             HHHHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHH
Q 009414          210 KPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRI  289 (535)
Q Consensus       210 ~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~  289 (535)
                      ..+++++++.+ ||.+++.        ..++.+.....+..   .     .|.           +..++.+.+.+++.+.
T Consensus       157 ~~~~~~vi~~~-~G~~~~~--------~~~~~~~~~~~~~~---~-----~P~-----------~~~~~~~~~~~~~~~~  208 (415)
T 2zwu_A          157 EPFPIRIFMLL-AGLPEED--------IPHLKYLTDQMTRP---D-----GSM-----------TFAEAKEALYDYLIPI  208 (415)
T ss_dssp             THHHHHHHHHH-HTCCGGG--------HHHHHHHHHHHHSC---C-----SSS-----------CHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-cCCCHHH--------HHHHHHHHHHHHhc---c-----CHH-----------HHHHHHHHHHHHHHHH
Confidence            88999999998 9987643        22344444333321   0     121           2345667788899999


Q ss_pred             HHHHHHhhcCCCCCCcHHHHHhccCCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhh
Q 009414          290 IQEHRTTQTSLQRNSDFVDVLLSLSGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVV  368 (535)
Q Consensus       290 i~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~  368 (535)
                      |++++++.    . .|+++.|++...+ .+++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++   
T Consensus       209 i~~r~~~~----~-~dll~~ll~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---  280 (415)
T 2zwu_A          209 IEQRRQKP----G-TDAISIVANGQVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE---  280 (415)
T ss_dssp             HHHHHHSC----C-SSHHHHHHTCEETTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG---
T ss_pred             HHHHHhCC----C-CCHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH---
Confidence            99887632    2 3999999986433 3599999999999999999999999999999999999999999999964   


Q ss_pred             cCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCC
Q 009414          369 GRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPE  448 (535)
Q Consensus       369 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~  448 (535)
                                     ||+|||+|+||++|+++.  . |.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||
T Consensus       281 ---------------~l~a~i~E~lRl~p~~~~--~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~Pe  342 (415)
T 2zwu_A          281 ---------------RIPAACEELLRRFSLVAD--G-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFS  342 (415)
T ss_dssp             ---------------GHHHHHHHHHHHTCCBCC--E-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTT
T ss_pred             ---------------HHHHHHHHHHhhcCCcCC--c-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccccCCC
Confidence                           899999999999999994  3 9999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcce-eeecCCCCCCccccccccccccCcee
Q 009414          449 RFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFK-WVQSDYDPVDLSEVLRLSCEMKNPLT  527 (535)
Q Consensus       449 R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (535)
                      ||-               ..++|||.|+|.|+|++||++|++++++.|+++|+ +++.++  .++. ..+....+..+++
T Consensus       343 R~~---------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~-~~~~~~~~~~~lp  404 (415)
T 2zwu_A          343 RQK---------------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPG--AQIQ-HKSGIVSGVQALP  404 (415)
T ss_dssp             CSS---------------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTT--CCCC-EECSSBCEESCCE
T ss_pred             CCC---------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCC--cccc-cCCccccCcceeE
Confidence            951               25899999999999999999999999999999998 999873  2331 2344556678999


Q ss_pred             EEEEeccC
Q 009414          528 VRVHARRR  535 (535)
Q Consensus       528 v~~~~r~~  535 (535)
                      |++++|.+
T Consensus       405 v~~~~r~~  412 (415)
T 2zwu_A          405 LVWDPATT  412 (415)
T ss_dssp             EECCGGGC
T ss_pred             EEEecCCC
Confidence            99999864


No 39 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=6.6e-60  Score=465.08  Aligned_cols=380  Identities=18%  Similarity=0.234  Sum_probs=303.8

Q ss_pred             ccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC-CCCCCCCchhh-----hhhhhcccceeeCcCC
Q 009414           84 LMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS-SVFADRPVKES-----AYSLMFNRAIGFAPYG  157 (535)
Q Consensus        84 ~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~~~~~~-----~~~~~~g~~~~~~~~g  157 (535)
                      .+..+++..+.++ ++|  |||+++++|+.++++|+||+.+++++++ ..|++++....     ......+.++++ .+|
T Consensus        10 ~~~~~p~~~~~~~-r~y--Gpv~~~~~~~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g   85 (404)
T 3ejb_B           10 EFLKNPYSFYDTL-RAV--HPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLF-QNQ   85 (404)
T ss_dssp             HHHHCHHHHHHHH-HHH--CSEEEEEETTEEEEEECCHHHHHHHHHCTTEECCCSSCTTCCTTHHHHHHHHTSGGG-CCT
T ss_pred             ccccCchHHHHHH-Hhh--CCEeeccCCCCCEEEEecHHHHHHHHhCcccccCcccccccccccchhhhhhcchhh-cCC
Confidence            3446889999998 589  9999999999999999999999999985 45555553111     112234566644 489


Q ss_pred             hhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHH-HHHHHHHHHHHHHHhcccccccCCCCchH
Q 009414          158 VYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRD-ILKPASLNNMMCSVFGRKYALLGYSSNTE  236 (535)
Q Consensus       158 ~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~-~~~~~~~~vi~~~~fG~~~~~l~~~~~~~  236 (535)
                      +.|+++|+.+ .+.|+++.++.+.+.+++.++++++.+.+  ++.+|+.. +...++.++++. +||.+.+.        
T Consensus        86 ~~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--------  153 (404)
T 3ejb_B           86 PDHRRLRTLA-SGAFTPRTTESYQPYIIETVHHLLDQVQG--KKKMEVISDFAFPLASFVIAN-IIGVPEED--------  153 (404)
T ss_dssp             THHHHHHHHH-HGGGSHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTHHHHHHHHHHH-HHTCCGGG--------
T ss_pred             chHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhhh--cCCcchHHHHHHHHHHHHHHH-HcCCCHHH--------
Confidence            9999999999 68999999999999999999999999865  56789865 455689999988 48976543        


Q ss_pred             HHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCC
Q 009414          237 ARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGP  316 (535)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~  316 (535)
                      ...+.+........+.       .|+     .....++..+..+.+.+++.+.+++++++.    . .|+++.|+...++
T Consensus       154 ~~~~~~~~~~~~~~~~-------~p~-----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~-~d~l~~ll~~~~~  216 (404)
T 3ejb_B          154 REQLKEWAASLIQTID-------FTR-----SRKALTEGNIMAVQAMAYFKELIQKRKRHP----Q-QDMISMLLKGREK  216 (404)
T ss_dssp             HHHHHHHHHHHHGGGS-------TTC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC----C-SSHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHhcc-------CCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----c-chHHHHHHhcccC
Confidence            2233333333332211       132     122345667788888999999998887532    2 3999999933334


Q ss_pred             CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCC
Q 009414          317 DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLH  396 (535)
Q Consensus       317 ~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~  396 (535)
                      ++++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |++|||+|+||++
T Consensus       217 ~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~  278 (404)
T 3ejb_B          217 DKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD------------------LIGTAVEECLRYE  278 (404)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHHHS
T ss_pred             CCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHhC
Confidence            5799999999999999999999999999999999999999999999975                  7999999999999


Q ss_pred             CCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCC
Q 009414          397 PPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGR  476 (535)
Q Consensus       397 ~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~  476 (535)
                      |+++..  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||.               ..++|||.|+
T Consensus       279 p~~~~~--~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~---------------~~~~~Fg~G~  341 (404)
T 3ejb_B          279 SPTQMT--ARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP---------------NPHLSFGHGH  341 (404)
T ss_dssp             CSBCEE--EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS---------------CCCCTTCCST
T ss_pred             Cccccc--ceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC---------------CCCCCCCCcC
Confidence            999966  89999999999999999999999999999999999999999999982               2479999999


Q ss_pred             CCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          477 RTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       477 r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      |.|+|++||++|++++++.|+++| ++++.++ ++.+  ..+...+....++|++++|.
T Consensus       342 r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-~~~~--~~~~~~~~~~~lpv~~~~~~  397 (404)
T 3ejb_B          342 HVCLGSSLARLEAQIAINTLLQRMPSLNLADF-EWRY--RPLFGFRALEELPVTFEASW  397 (404)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHCTTCEEC---CCCB--CSCSSBCCBSCCEEECC---
T ss_pred             ccCcCHHHHHHHHHHHHHHHHHhCcccccCCC-Ccee--ccCcccCCcceeEEEEeccc
Confidence            999999999999999999999999 9999863 2333  34555567789999999874


No 40 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=4.3e-60  Score=466.22  Aligned_cols=377  Identities=21%  Similarity=0.285  Sum_probs=304.7

Q ss_pred             ccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCc--hhh---hhh--hh----ccccee
Q 009414           84 LMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPV--KES---AYS--LM----FNRAIG  152 (535)
Q Consensus        84 ~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~--~~~---~~~--~~----~g~~~~  152 (535)
                      .+..+++..+.++ ++|  |+|+++++++.++++|+||+.+++|+.+..+++++.  +..   ...  .+    .+.++ 
T Consensus        12 ~~~~~p~~~~~~l-~~y--Gpv~~~~~~~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-   87 (408)
T 1odo_A           12 PTGADHHTEHRTL-REG--GPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVENM-   87 (408)
T ss_dssp             TTCTTHHHHHHHH-HTT--CSEEEEEETTEEEEEECCHHHHHHHTTCTTEESCHHHHCTTHHHHTTTCTTTHHHHCCSG-
T ss_pred             cccCChHHHHHHH-HHh--CCeEEeccCCCCEEEECCHHHHHHHHcCCCcccccccccccccccccccccccccccccc-
Confidence            4567899999999 999  999999999889999999999999998755554432  110   000  01    23455 


Q ss_pred             eCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhC-CCceeHHHHHH-HHHHHHHHHHHhcccccccC
Q 009414          153 FAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYG-GSAFRLRDILK-PASLNNMMCSVFGRKYALLG  230 (535)
Q Consensus       153 ~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~-~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~l~  230 (535)
                      +..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.|.+.. ++++|+.+.+. .+++++++. +||.+.+.  
T Consensus        88 ~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--  163 (408)
T 1odo_A           88 FTAYGPNHRKLRRLV-APAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR--  163 (408)
T ss_dssp             GGCCHHHHHHHHHTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH--
T ss_pred             cccCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH--
Confidence            445999999999999 6899999999999999999999999998543 67899998886 599999996 79976432  


Q ss_pred             CCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHH
Q 009414          231 YSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVL  310 (535)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~l  310 (535)
                            ...+.......+..           .   ..    .++..++.+.+.+++.+.|++++++.    . .|+++.|
T Consensus       164 ------~~~~~~~~~~~~~~-----------~---~~----~~~~~~~~~~~~~~~~~~i~~r~~~~----~-~d~l~~l  214 (408)
T 1odo_A          164 ------RDGFRALVDGVFDT-----------T---LD----QAEAQANTARLYEVLDQLIAAKRATP----G-DDMTSLL  214 (408)
T ss_dssp             ------HHHHHHHHHHHHCT-----------T---CC----HHHHHHHHHHHHHHHHHHHHHHHHSC----C-SSHHHHH
T ss_pred             ------HHHHHHHHHHHhcc-----------c---CC----HHHHHHHHHHHHHHHHHHHHHHhhCC----C-CCHHHHH
Confidence                  23343333333220           0   10    13455677788899999998887642    2 3999999


Q ss_pred             hccCCC----CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchh
Q 009414          311 LSLSGP----DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLP  386 (535)
Q Consensus       311 l~~~~~----~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~  386 (535)
                      ++...+    .+++++++.+++..+++||+|||+++++|++++|++||++|+++|+|+                  +||+
T Consensus       215 l~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~  276 (408)
T 1odo_A          215 IAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE------------------VTWA  276 (408)
T ss_dssp             HHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS------------------SCHH
T ss_pred             HHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHH
Confidence            986533    469999999999999999999999999999999999999999999973                  3799


Q ss_pred             HHHHhhhcCCCCCCcccccccccccceec-CeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCC
Q 009414          387 AVVKEVVRLHPPGPLLSWARLAITDTTVD-HYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGS  465 (535)
Q Consensus       387 a~i~EtlRl~~~~~~~~~~R~~~~d~~~~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~  465 (535)
                      |||+|+||++|+++... +|.+.+|++++ ||.||||+.|.++.+++|+||++|+||++|+|||+               
T Consensus       277 a~i~E~lRl~p~~~~~~-~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~---------------  340 (408)
T 1odo_A          277 DVVEETLRHEPAVKHLP-LRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT---------------  340 (408)
T ss_dssp             HHHHHHHHHSCSBSCEE-EEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS---------------
T ss_pred             HHHHHHHhhCCCccCCc-ceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC---------------
Confidence            99999999999998522 89999999999 99999999999999999999999999999999993               


Q ss_pred             CCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEe
Q 009414          466 DLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHA  532 (535)
Q Consensus       466 ~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  532 (535)
                      +..++|||.|+|.|+|++||++|++++++.|+++| ++++..+ ..++....+.+.++..+++|+++|
T Consensus       341 ~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          341 VKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADP-AEELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCT-TSCCCBCSCSSBCCBSCCEEECC-
T ss_pred             CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCC-ccccccccCccccCcccceEEecC
Confidence            13589999999999999999999999999999999 7998743 123333445666777899999875


No 41 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=1e-59  Score=463.03  Aligned_cols=376  Identities=18%  Similarity=0.205  Sum_probs=307.9

Q ss_pred             ccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCchh-h----h-hhhhcccceeeCcCC
Q 009414           84 LMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKE-S----A-YSLMFNRAIGFAPYG  157 (535)
Q Consensus        84 ~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~-~----~-~~~~~g~~~~~~~~g  157 (535)
                      .+..+++.++.++ ++|  |+||++++|+.++++|+||+.+++++.+..|++++... .    . .....+.++++ .+|
T Consensus        17 ~~~~~p~~~~~~l-~~y--Gpv~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g   92 (411)
T 3a4g_A           17 TFWQNPHPAYAAL-RAE--DPVRKLALPDGPVWLLTRYADVREAFVDPRLSKDWRHTLPEDQRADMPATPTPMMIL-MDP   92 (411)
T ss_dssp             GGTTCCHHHHHHH-HHH--CSEEEEEETTEEEEEECSHHHHHHHHTCTTEESCGGGGSCGGGCTTCCSCSSCCGGG-CCT
T ss_pred             hhhcCchHHHHHH-Hhc--CCeeeccCCCCCEEEEecHHHHHHHHhCCCcccccccccccccccccCccccccccc-CCc
Confidence            3557899999999 899  99999999999999999999999999876687775432 1    0 11113556544 499


Q ss_pred             hhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHHHHHHHHHhcccccccCCCCchH
Q 009414          158 VYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLR-DILKPASLNNMMCSVFGRKYALLGYSSNTE  236 (535)
Q Consensus       158 ~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~-~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~  236 (535)
                      +.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+  ++++|+. ++...+++++++.+ ||.+.+.        
T Consensus        93 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~--------  160 (411)
T 3a4g_A           93 PDHTRLRKLV-GRSFTVRRMNELEPRITEIADGLLAGLPT--DGPVDLMREYAFQIPVQVICEL-LGVPAED--------  160 (411)
T ss_dssp             THHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHSCS--SSCEEHHHHTTTTHHHHHHHHH-HTCCGGG--------
T ss_pred             hHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHhHHHHHHHH-hCCCHHH--------
Confidence            9999999999 68999999999999999999999999964  3579997 45578999999975 9987543        


Q ss_pred             HHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCC-
Q 009414          237 ARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSG-  315 (535)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~-  315 (535)
                      ...+......+...         .|      +    ++..++.+.+.+++.+.|++++++.    . .|+++.|++..+ 
T Consensus       161 ~~~~~~~~~~~~~~---------~p------~----~~~~~~~~~~~~~~~~~i~~r~~~~----~-~d~l~~ll~~~~~  216 (411)
T 3a4g_A          161 RDDFSAWSSVLVDD---------SP------A----DDKNAAMGKLHGYLSDLLERKRTEP----D-DALLSSLLAVSDE  216 (411)
T ss_dssp             HHHHHHHHHHHTTS---------SC------T----TTHHHHHHHHHHHHHHHHHHHHHSC----C-SSHHHHHHHCCCT
T ss_pred             HHHHHHHHHHHhcc---------CC------H----HHHHHHHHHHHHHHHHHHHHHHhCC----C-CCHHHHHHHhhcc
Confidence            22333333332211         12      1    1344566778889999998887642    2 399999998754 


Q ss_pred             -CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhc
Q 009414          316 -PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVR  394 (535)
Q Consensus       316 -~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlR  394 (535)
                       +..++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++                  |++|||+|+||
T Consensus       217 ~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lR  278 (411)
T 3a4g_A          217 DGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS------------------LISSAVEEFLR  278 (411)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH------------------HHHHHHHHHHH
Confidence             33699999999999999999999999999999999999999999999963                  89999999999


Q ss_pred             CCCCCC-cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccC
Q 009414          395 LHPPGP-LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFG  473 (535)
Q Consensus       395 l~~~~~-~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg  473 (535)
                      ++|+++ .+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||.               ..++|||
T Consensus       279 l~p~~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------------~~~l~FG  341 (411)
T 3a4g_A          279 FDSPVSQAP--IRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA---------------SGGVFFG  341 (411)
T ss_dssp             HTCSBCBCC--CEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC---------------TTCCTTC
T ss_pred             hcccccCCc--eeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC---------------CCCCCCC
Confidence            999999 55  89999999999999999999999999999999999999999999972               2489999


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEeccC
Q 009414          474 SGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR  535 (535)
Q Consensus       474 ~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  535 (535)
                      .|+|.|+|++||++|++++++.|+++| ++++.++. .+.........++..+++|++++|.+
T Consensus       342 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~~~lpv~~~~r~~  403 (411)
T 3a4g_A          342 HGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGL-DELVYRESTLVRGLSRMPVTMGPRSA  403 (411)
T ss_dssp             CSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG-GGCCBCCCTTBCCBSCCEEECCCCCC
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHHhCCCcEECCCc-cccccccCccccCcceeEEEecCcch
Confidence            999999999999999999999999999 69987531 12222334555677899999999863


No 42 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=1.3e-60  Score=468.59  Aligned_cols=376  Identities=14%  Similarity=0.156  Sum_probs=307.4

Q ss_pred             ccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC-CCCCCCCchhhhhhhhcccceeeCcCChhHHH
Q 009414           84 LMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS-SVFADRPVKESAYSLMFNRAIGFAPYGVYWRT  162 (535)
Q Consensus        84 ~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~  162 (535)
                      .+..+++.++.+++++|+.|||+++++|+ ++++|+||+.+++|+++ ..|++++..........+...++..+|+.|++
T Consensus        16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   94 (398)
T 4fb2_A           16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQNTKAFSNKGVTFPRYETGEFELMMAGQDDPVHKK   94 (398)
T ss_dssp             CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTCCSSEEGGGCSSSCC----CCCTTTTCCTTHHHH
T ss_pred             hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhChhhccCCcccccCCCCcccccCcccCCchHHHH
Confidence            35578999999999999556999999986 47999999999999975 46776655433222222333335569999999


Q ss_pred             HHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCCchHHHHHH
Q 009414          163 LRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSSNTEARRLS  241 (535)
Q Consensus       163 ~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~  241 (535)
                      +|+.+ .+.|+++.++.+.+.+.+.++++++.+.+  ++.+|+...+ ..+++++++. +||.+.+.        ...+.
T Consensus        95 ~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--------~~~~~  162 (398)
T 4fb2_A           95 YRQLV-AKPFSPEATDLFTEQLRQSTNDLIDARIE--LGEGDAATWLANEIPARLTAI-LLGLPPED--------GDTYR  162 (398)
T ss_dssp             HHHHH-HTTTCHHHHHTTHHHHHHHHHHHHHTTTT--TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG--------HHHHH
T ss_pred             HHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHHH--------HHHHH
Confidence            99999 68999999999999999999999999865  4468875554 7899999998 78976433        33444


Q ss_pred             HHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCCC-CCC
Q 009414          242 RLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD-RLS  320 (535)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~-~l~  320 (535)
                      +.......           +.   . +    .+..++.+.+.+++.+.|++++++.    .+ |+++.|++...++ +++
T Consensus       163 ~~~~~~~~-----------~~---~-~----~~~~~~~~~~~~~~~~~i~~r~~~~----~~-d~l~~ll~~~~~~~~l~  218 (398)
T 4fb2_A          163 RWVWAITH-----------VE---N-P----EEGAEIFAELVAHARTLIAERRTNP----GN-DIMSRVIMSKIDGESLS  218 (398)
T ss_dssp             HHHHHHHH-----------CC---C-H----HHHHHHHHHHHHHHHHHHHHHHHSC----CS-SHHHHHHHCCBTTBCCC
T ss_pred             HHHHHHhc-----------CC---C-H----HHHHHHHHHHHHHHHHHHHHHHhCC----CC-CHHHHHHHcccCCCCCC
Confidence            44444332           11   0 1    2456677888999999999888742    23 9999999876443 599


Q ss_pred             HHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCC
Q 009414          321 DHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGP  400 (535)
Q Consensus       321 ~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~  400 (535)
                      ++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |++|||+|+||++|+++
T Consensus       219 ~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~  280 (398)
T 4fb2_A          219 EDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE------------------LIPNAVDELLRFYGPAM  280 (398)
T ss_dssp             HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHHCCBC
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhCCCcC
Confidence            999999999999999999999999999999999999999999976                  68999999999999999


Q ss_pred             cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCc
Q 009414          401 LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCP  480 (535)
Q Consensus       401 ~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~  480 (535)
                       +  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||.               ..++|||.|+|.|+
T Consensus       281 -~--~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------------~~~~~FG~G~r~C~  342 (398)
T 4fb2_A          281 -V--GRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTP---------------NRHLSLGHGIHRCL  342 (398)
T ss_dssp             -E--EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCS---------------CCCCTTCCSTTCCT
T ss_pred             -C--CeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCC---------------CCCCCCCCCCcCCC
Confidence             6  89999999999999999999999999999999999999999999972               35899999999999


Q ss_pred             chhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEeccC
Q 009414          481 GKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR  535 (535)
Q Consensus       481 G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  535 (535)
                      |++||++|++++++.|+++| ++++.++.+..+..  +... ....++|++++|.+
T Consensus       343 G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~--~~~~-~~~~lpv~~~~~~~  395 (398)
T 4fb2_A          343 GAHLIRVEARVAITEFLKRIPEFSLDPNKECEWLM--GQVA-GMLHVPIIFPKGKR  395 (398)
T ss_dssp             THHHHHHHHHHHHHHHHHHCCSCEECTTSCCEEEC--SSBC-EEEECEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCcEECCCCCceecc--cccc-ccceeEEEEcCCCC
Confidence            99999999999999999999 99998865444332  3333 33679999998864


No 43 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=1.9e-60  Score=468.54  Aligned_cols=380  Identities=20%  Similarity=0.250  Sum_probs=306.9

Q ss_pred             ccCCChhHHHHHHHHHhcCcceEEEEe-CCeeEEEecCHHHHHHHhcCCCCCCCC-chhhhh-----h--h----hc-cc
Q 009414           84 LMTNLPHHNLAAAAEAYKAKRVMAFSL-GETRVIITCSPDVAKEILNSSVFADRP-VKESAY-----S--L----MF-NR  149 (535)
Q Consensus        84 ~~~~~~~~~l~~~~~ky~~G~v~~~~~-g~~~~vvv~dp~~i~~i~~~~~~~~~~-~~~~~~-----~--~----~~-g~  149 (535)
                      .+..+++..+.++ ++|  |||+++++ |+.++++|+||+.+++|+.+..+++++ .+....     .  .    .. +.
T Consensus        14 ~~~~~p~~~~~~l-~~y--Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (411)
T 1gwi_A           14 PFVTDLDGESARL-RAA--GPLAAVELPGGVPVWAVTHHAEAKALLTDPRLVKDINVWGAWRRGEIPADWPLIGLANPGR   90 (411)
T ss_dssp             TTCSCHHHHHHHH-HHT--CSEEEEEETTTEEEEEECSHHHHHHHHTCTTEECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred             cccCChHHHHHHH-HHh--CCeeeeecCCCccEEEEeCHHHHHHHHcCCccccCcccccccccccCCcccchhhhhcccc
Confidence            4557899999999 999  99999998 899999999999999999875565543 111110     0  0    12 44


Q ss_pred             ceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHH-HHHHHHHHHHHhcccccc
Q 009414          150 AIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILK-PASLNNMMCSVFGRKYAL  228 (535)
Q Consensus       150 ~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~  228 (535)
                      ++ +..+|+.|+++|+.+ .+.|+++.++.+.+.+++.++++++.|.+ .++++|+.+.+. .+++++++. +||.+.+.
T Consensus        91 ~l-~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~  166 (411)
T 1gwi_A           91 SM-LTVDGAEHRRLRTLV-AQALTVRRVEHMRGRITELTDRLLDELPA-DGGVVDLKAAFAYPLPMYVVAD-LMGIEEAR  166 (411)
T ss_dssp             SG-GGCCHHHHHHHHHHH-TTTSCHHHHHTTHHHHHHHHHHHHHTSCC-SCCCEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred             cc-ccCCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcchHHHHhhHHHHHHHHH-HhCCCHHH
Confidence            55 445999999999999 68999999999999999999999999963 367899998776 599999996 79976532


Q ss_pred             cCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHH
Q 009414          229 LGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVD  308 (535)
Q Consensus       229 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~  308 (535)
                              ...+.......+...              ..    .++..++.+.+.+++.+.|++++++.    . .|+++
T Consensus       167 --------~~~~~~~~~~~~~~~--------------~~----~~~~~~~~~~~~~~~~~~i~~r~~~~----~-~d~l~  215 (411)
T 1gwi_A          167 --------LPRLKVLFEKFFSTQ--------------TP----PEEVVATLTELASIMTDTVAAKRAAP----G-DDLTS  215 (411)
T ss_dssp             --------HHHHHHHHHHHHCTT--------------SC----HHHHHHHHHHHHHHHHHHHHHHHHSC----C-SSHHH
T ss_pred             --------HHHHHHHHHHHhccC--------------CC----hHHHHHHHHHHHHHHHHHHHHHHhCC----C-CCHHH
Confidence                    233333333332210              00    13455677788899999998887642    2 39999


Q ss_pred             HHhccCC-CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhH
Q 009414          309 VLLSLSG-PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPA  387 (535)
Q Consensus       309 ~ll~~~~-~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a  387 (535)
                      .|++..+ +.+++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  +||+|
T Consensus       216 ~ll~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a  277 (411)
T 1gwi_A          216 ALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE------------------AEWSA  277 (411)
T ss_dssp             HHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS------------------SCHHH
T ss_pred             HHHHhcccCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh------------------HHHHH
Confidence            9998754 3369999999999999999999999999999999999999999999873                  37999


Q ss_pred             HHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCC-CCCCCCCCCccCCCCCCCccccccCCC
Q 009414          388 VVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIY-ADPLKFMPERFVNPEAADMDISLMGSD  466 (535)
Q Consensus       388 ~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~  466 (535)
                      ||+|+||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++| +||++|+||||..              
T Consensus       278 ~i~E~lRl~p~~~~~~-~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~--------------  342 (411)
T 1gwi_A          278 VVEETLRFSTPTSHVL-IRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG--------------  342 (411)
T ss_dssp             HHHHHHHHSCSBCCEE-EEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS--------------
T ss_pred             HHHHHHHhCCcccCCc-eeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC--------------
Confidence            9999999999998522 89999999999999999999999999999999999 9999999999942              


Q ss_pred             CceeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEeccC
Q 009414          467 LRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARRR  535 (535)
Q Consensus       467 ~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  535 (535)
                      ..++|||.|+|.|+|++||++|++++++.|+++| ++++..+ +.++....+...++..+++|++++|.+
T Consensus       343 ~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~lpv~~~~r~~  411 (411)
T 1gwi_A          343 NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVP-AAELRNKPVVTQNDLFELPVRLAHHHH  411 (411)
T ss_dssp             SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC-GGGCCBCSCTTBCCBSCCEEESSCC--
T ss_pred             CCcccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCC-cccccccccccccCcceeEEEecCCCC
Confidence            3589999999999999999999999999999999 7998753 112333344556777899999999854


No 44 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=1.4e-59  Score=461.11  Aligned_cols=375  Identities=19%  Similarity=0.197  Sum_probs=304.2

Q ss_pred             CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCchhhh--------hhhhcccceeeCcCCh
Q 009414           87 NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKESA--------YSLMFNRAIGFAPYGV  158 (535)
Q Consensus        87 ~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~--------~~~~~g~~~~~~~~g~  158 (535)
                      .+++.++.++ ++|  |||++ +  +.++++|+||+.+++|+.+..|++++.....        ....++.++++. +|+
T Consensus        13 ~~p~~~~~~l-~~y--Gpv~~-~--g~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~   85 (397)
T 3buj_A           13 RDPYPSYHWL-LRH--DPVHR-G--AHRVWYVSRFADVRAVLGDERFARTGIRRFWTDLVGPGLLAEIVGDIILFQ-DEP   85 (397)
T ss_dssp             HCCHHHHHHH-HHH--CSEEE-C--GGGCEEECSHHHHHHHHTCTTEESHHHHHHHHHHHCSSHHHHHHTTCGGGC-CTT
T ss_pred             cCchHHHHHH-Hhc--CCeee-C--CCCeEEEcCHHHHHHHHcCCCcccCcccccccccccccccccccccccccC-Cch
Confidence            5788888887 589  99998 6  5778999999999999987666665432111        011115566544 899


Q ss_pred             hHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHH-HHHHHHHHHHHHHHhcccccccCCCCchHH
Q 009414          159 YWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRD-ILKPASLNNMMCSVFGRKYALLGYSSNTEA  237 (535)
Q Consensus       159 ~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~-~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~  237 (535)
                      .|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+  ++++|+.. +...+++++++.+ ||.+.+.        .
T Consensus        86 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~--------~  153 (397)
T 3buj_A           86 DHGRLRGVV-GPAFSPSALRRLEPVIAGTVDDLLRPALA--RGAMDVVDELAYPLALRAVLGL-LGLPAAD--------W  153 (397)
T ss_dssp             HHHHHHHHH-GGGSSTTTTGGGHHHHHHHHHHHHHHHHT--TTEEEHHHHTHHHHHHHHHHHH-HTCCGGG--------H
T ss_pred             hHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHhHHHHHHHH-hCCCHHH--------H
Confidence            999999999 68999999999999999999999999975  45899874 5578999999998 9987643        2


Q ss_pred             HHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCCC
Q 009414          238 RRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD  317 (535)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~  317 (535)
                      ..+............        +.   + +....++..++.+.+.+++.+.|++++++.    .+ |+++.|++..+++
T Consensus       154 ~~~~~~~~~~~~~~~--------~~---~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~-dll~~ll~~~~~~  216 (397)
T 3buj_A          154 GAVGRWSRDVGRTLD--------RG---A-SAEDMRRGHAAIAEFADYVERALARRRREG----GE-DLLALMLDAHDRG  216 (397)
T ss_dssp             HHHHHHHHHHHGGGC--------SS---C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CC-SHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhhcC--------CC---C-ChHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CC-CHHHHHHHhhhcC
Confidence            233333333332211        00   1 122345566778889999999999887652    23 9999999865332


Q ss_pred             CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCC
Q 009414          318 RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHP  397 (535)
Q Consensus       318 ~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~  397 (535)
                      .++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+|||+|+||++|
T Consensus       217 ~ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p  278 (397)
T 3buj_A          217 LMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD------------------LLAQAVEECLRYDP  278 (397)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHHSC
T ss_pred             CCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH------------------HHHHHHHHHHhhcC
Confidence            399999999999999999999999999999999999999999999963                  89999999999999


Q ss_pred             CCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCC
Q 009414          398 PGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRR  477 (535)
Q Consensus       398 ~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r  477 (535)
                      +++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||.               ..++|||.|+|
T Consensus       279 ~~~~~--~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------------~~~~~FG~G~r  341 (397)
T 3buj_A          279 SVQSN--TRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP---------------VPSMSFGAGMR  341 (397)
T ss_dssp             SCCEE--EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC---------------CCCSTTCCGGG
T ss_pred             cccCc--ceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC---------------CCCCCCCCCCc
Confidence            99965  89999999999999999999999999999999999999999999994               24799999999


Q ss_pred             CCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          478 TCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       478 ~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      .|+|++||++|++++++.| ++| ++++.++. .+.....+.+.++.++++|++++|.
T Consensus       342 ~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~-~~~~~~~~~~~~~~~~l~v~~~~rg  397 (397)
T 3buj_A          342 YCLGSYLARTQLRAAVAAL-ARLPGLRLGCAS-DALAYQPRTMFRGLASLPIAFTPGG  397 (397)
T ss_dssp             CCTTHHHHHHHHHHHHHHH-HTSTTCEESSCS-TTCCBCSCSSCCCBSCCEEECCTTC
T ss_pred             cCCCHHHHHHHHHHHHHHH-hcCCCceeCCCC-cccccccccccCCCcceeEEecCCC
Confidence            9999999999999999999 999 89998751 1222334556677799999999873


No 45 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=3.6e-60  Score=466.78  Aligned_cols=376  Identities=14%  Similarity=0.178  Sum_probs=302.5

Q ss_pred             cccCCChhHHHHHHHHHhcCcceEEEEe-CCeeEEEecCHHHHHHHhcCCCCCCCCchhhh-----hhh---hcccceee
Q 009414           83 SLMTNLPHHNLAAAAEAYKAKRVMAFSL-GETRVIITCSPDVAKEILNSSVFADRPVKESA-----YSL---MFNRAIGF  153 (535)
Q Consensus        83 ~~~~~~~~~~l~~~~~ky~~G~v~~~~~-g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~-----~~~---~~g~~~~~  153 (535)
                      ..+..+++..+.+| ++|  |+|+++++ |+.++++|+||+.+++|+.+..+++++....+     ...   ..+.++++
T Consensus        20 ~~~~~~p~~~~~~l-~~y--Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (408)
T 3abb_A           20 RTCPYQPPKAYEER-RGE--SPLTQVTLFDGRPAWLITGHAEGRALLVDPRLSSDWGHPDFPVVVRRTEDRGGLAFPLIG   96 (408)
T ss_dssp             CSSTTSCCHHHHHH-CCS--SSEEEEECTTSCEEEEECCHHHHHHHHTCTTEECCTTSTTCCCCC---------CCTTTT
T ss_pred             cccccCchHHHHHH-Hhc--CCeeeeecCCCCcEEEEeCHHHHHHHHcCCCcccccccccccccccCCcccccccccccc
Confidence            34567899999999 889  99999998 88999999999999999986555554321111     000   12234544


Q ss_pred             CcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHH-HHHHHHHHHHHhcccccccCCC
Q 009414          154 APYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILK-PASLNNMMCSVFGRKYALLGYS  232 (535)
Q Consensus       154 ~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~l~~~  232 (535)
                       .+|+.|+++|+.+ .+.|+++.++.+.+.++++++++++.+.. .++++|+.+.+. .+++++++. +||.+++.    
T Consensus        97 -~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----  168 (408)
T 3abb_A           97 -VDDPVHARQRRML-IPSFGVKRMNAIRPRLQSLVDRLLDDMLA-KGPGADLVSAFALPVPSVAICE-LLGVPYGD----  168 (408)
T ss_dssp             -CCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH-TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG----
T ss_pred             -CCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH----
Confidence             5999999999999 68999999999999999999999999975 456899998876 589999997 79987543    


Q ss_pred             CchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhc
Q 009414          233 SNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLS  312 (535)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~  312 (535)
                          ...+.......+..          +       ..  ++..++.+.+.+++.+.|++++++.    . .|+++.|++
T Consensus       169 ----~~~~~~~~~~~~~~----------~-------~~--~~~~~~~~~~~~~~~~~i~~r~~~~----~-~d~l~~ll~  220 (408)
T 3abb_A          169 ----HDFFEECSRNFVGA----------A-------TS--AEADAAFGELYTYLHGLVGRKQAEP----E-DGLLDELIA  220 (408)
T ss_dssp             ----HHHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHSC----C-SSHHHHHHH
T ss_pred             ----HHHHHHHHHHHhcc----------c-------ch--HHHHHHHHHHHHHHHHHHHHHHhCC----C-CCHHHHHHh
Confidence                22333333322210          0       00  2334566778888999998887642    2 399999998


Q ss_pred             cCC-CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHh
Q 009414          313 LSG-PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKE  391 (535)
Q Consensus       313 ~~~-~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E  391 (535)
                      ... +++++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+|||+|
T Consensus       221 ~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E  282 (408)
T 3abb_A          221 RQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG------------------AVSGVVEE  282 (408)
T ss_dssp             HHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH------------------HHHHHHHH
T ss_pred             cccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHH
Confidence            642 34699999999999999999999999999999999999999999999865                  68999999


Q ss_pred             hhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceec
Q 009414          392 VVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAP  471 (535)
Q Consensus       392 tlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~  471 (535)
                      +||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||-               ..++|
T Consensus       283 ~lRl~p~~~~~--~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------------~~~~~  345 (408)
T 3abb_A          283 LLRFTSVSDHI--VRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNA---------------RHHVG  345 (408)
T ss_dssp             HHHHHCSSCEE--EEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCC---------------TTCCT
T ss_pred             HHHhcCccccc--ceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCCC---------------CCCCC
Confidence            99999999965  89999999999999999999999999999999999999999999961               35899


Q ss_pred             cCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEec
Q 009414          472 FGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR  533 (535)
Q Consensus       472 Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  533 (535)
                      ||.|+|.|+|++||++|++++++.|+++| ++++..+ +.++....+...++...++|++++|
T Consensus       346 FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~lpv~~~~~  407 (408)
T 3abb_A          346 FGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVP-LDEVPIKAGHDAQGPIELPVVWHHH  407 (408)
T ss_dssp             TCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC-GGGSCBCCTTSCCSBSCCEEECSCC
T ss_pred             CCCCCcCCcCHHHHHHHHHHHHHHHHHhCccceecCC-ccccccccCcccCCcceeEEEeCCC
Confidence            99999999999999999999999999999 8998753 1122223345556778999999876


No 46 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=5.8e-59  Score=456.89  Aligned_cols=375  Identities=14%  Similarity=0.142  Sum_probs=305.6

Q ss_pred             CCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCC-CCCCCCchhhhhhhhcccceeeCcCChhHHHHH
Q 009414           86 TNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSS-VFADRPVKESAYSLMFNRAIGFAPYGVYWRTLR  164 (535)
Q Consensus        86 ~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R  164 (535)
                      ..+++.++.++++ |  ||||+  ++. ++++|+||+.+++|+.+. .|++++...  .....+.++++. +|+.|+++|
T Consensus        17 ~~~p~~~~~~l~~-~--Gpv~~--~~~-~~vvv~~~~~v~~vl~~~~~f~~~~~~~--~~~~~~~~l~~~-~g~~h~~~R   87 (398)
T 2xkr_A           17 SREARAAYRWMRA-N--QPVFR--DRN-GLAAASTYQAVIDAERQPELFSNAGGIR--PDQPALPMMIDM-DDPAHLLRR   87 (398)
T ss_dssp             CTTHHHHHHHHHH-H--CSEEE--CTT-CCEEECSHHHHHHHHTCTTTEESTTCSS--TTSCCCSSGGGC-CTTHHHHHH
T ss_pred             ccChhHHHHHHHh-c--CCeee--cCC-CeEEEecHHHHHHHHhCcccccCccccC--Cccccccccccc-CchHHHHHH
Confidence            4688999999987 9  89974  444 679999999999999863 577765432  112245565444 899999999


Q ss_pred             HHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHHHHHHHHHhcccccccCCCCchHHHHHHHH
Q 009414          165 RIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLR-DILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRL  243 (535)
Q Consensus       165 r~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~-~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~  243 (535)
                      +.+ .+.|+++.++.+.+.+.+.++++++.+.+  ++.+|+. ++...+++++++.+ ||.+.+.        ...+...
T Consensus        88 ~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~--------~~~~~~~  155 (398)
T 2xkr_A           88 KLV-NAGFTRKRVKDKEASIAALCDTLIDAVCE--RGECDFVRDLAAPLPMAVIGDM-LGVRPEQ--------RDMFLRW  155 (398)
T ss_dssp             HHH-GGGSCHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTHHHHHHHHHH-HTCCGGG--------HHHHHHH
T ss_pred             HHh-hhhhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCccHHHHHHHHHHHHHHHHH-hCCCHHH--------HHHHHHH
Confidence            999 68999999999999999999999999965  3479999 55678999999998 9987643        2233333


Q ss_pred             HHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCC-CCCCHH
Q 009414          244 VEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGP-DRLSDH  322 (535)
Q Consensus       244 ~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~  322 (535)
                      ........        .|.+  + + ...++..++.+.+.+++.+.|++++++    .. .|+++.|++...+ .+++++
T Consensus       156 ~~~~~~~~--------~~~~--~-p-~~~~~~~~~~~~~~~~~~~~i~~r~~~----~~-~dll~~ll~~~~~~~~ls~~  218 (398)
T 2xkr_A          156 SDDLVTFL--------SSHV--S-Q-EDFQITMDAFAAYNDFTRATIAARRAD----PT-DDLVSVLVSSEVDGERLSDD  218 (398)
T ss_dssp             HHHHHHHH--------TSCC--C-H-HHHHHHHHHHHHHHHHHHHHHHHHHHS----CC-SSHHHHHHHCCBTTBCCCHH
T ss_pred             HHHHHhcc--------Cccc--c-h-hhHHHHHHHHHHHHHHHHHHHHHHHhC----CC-CCHHHHHHHhhccCCCCCHH
Confidence            44333321        1111  1 1 233456677888999999999988763    22 3999999987543 359999


Q ss_pred             HHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcc
Q 009414          323 DIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLL  402 (535)
Q Consensus       323 ~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~  402 (535)
                      ++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |++|||+|+||++|+++.+
T Consensus       219 ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~  280 (398)
T 2xkr_A          219 ELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS------------------LLPGAIEEMLRWTAPVKNM  280 (398)
T ss_dssp             HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHHHCSBCEE
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhhcccccCc
Confidence            9999999999999999999999999999999999999999975                  8999999999999999985


Q ss_pred             cccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcch
Q 009414          403 SWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGK  482 (535)
Q Consensus       403 ~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~  482 (535)
                        +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||..               .++|||.|+|.|+|+
T Consensus       281 --~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~---------------~~l~FG~G~r~C~G~  343 (398)
T 2xkr_A          281 --CRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN---------------SHLAFGFGTHFCLGN  343 (398)
T ss_dssp             --EEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC---------------CCCTTCCSTTCCTTH
T ss_pred             --ceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC---------------CCCcCCCCCcCCcCH
Confidence              899999999999999999999999999999999999999999999741               389999999999999


Q ss_pred             hHHHHHHHHHHHHHhhcc-eeeecCCCCCCccc-cccccccccCceeEEEEeccC
Q 009414          483 GLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSE-VLRLSCEMKNPLTVRVHARRR  535 (535)
Q Consensus       483 ~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~r~~  535 (535)
                      +||++|++++++.|+++| ++++.+.  .++.. ..+.......+++|++++|.|
T Consensus       344 ~lA~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~lpv~~~p~~r  396 (398)
T 2xkr_A          344 QLARLELSLMTERVLRRLPDLRLVAD--DSVLPLRPANFVSGLESMPVVFTPSPP  396 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCEESCT--TCCCCBCCCSSBCCBSCCEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHHHhCCCceECCC--cceecccCcccccCccceeEEecCCCC
Confidence            999999999999999999 5999753  23320 223444566899999999875


No 47 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=1.2e-59  Score=462.79  Aligned_cols=388  Identities=16%  Similarity=0.202  Sum_probs=305.4

Q ss_pred             CCCCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEe-CCeeEEEecCHHHHHHHhcCCCCCCCCchhhh-
Q 009414           65 ACSKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSL-GETRVIITCSPDVAKEILNSSVFADRPVKESA-  142 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~-g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~-  142 (535)
                      +.....|||.. |+-   ..+..+++.++.+++ +|  |||+++++ |+.++++|+||+.+++++.+..|++++..... 
T Consensus         4 ~~~~~~~g~~~-~~~---~~~~~~p~~~~~~l~-~~--Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~   76 (413)
T 2z36_A            4 NVADELAGLEL-PVE---RGCPFAPPAAYERLR-ER--APINKVRLTSGGQAWWVSGHEEARAVLADGRFSSDKRKDGFP   76 (413)
T ss_dssp             ------CCCEE-CCC---CCBTTBCCHHHHHHH-HH--CSEEEEEETTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCC
T ss_pred             cHHHHhccccC-CCC---cccccCchHHHHHHH-Hc--CCeeEeecCCCceEEEEecHHHHHHHHcCCCcccCccccCcc
Confidence            45667888763 442   335578999999997 89  99999998 89999999999999999987677776533211 


Q ss_pred             ----hhhh-----cccc-eeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HH
Q 009414          143 ----YSLM-----FNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KP  211 (535)
Q Consensus       143 ----~~~~-----~g~~-~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~  211 (535)
                          ....     .+.+ +++ .+|+.|+++|+.+ .+.|+++.++.+.+.+++.++++++.+.+..++++|+.+.+ ..
T Consensus        77 ~~~~~~~~~~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~  154 (413)
T 2z36_A           77 LFTLDAATLQQLRSQPPLMLG-MDGAEHSAARRPV-IGEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLP  154 (413)
T ss_dssp             CSSCCHHHHHHHTTSCCCGGG-CCHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTH
T ss_pred             ccccccccccccccccccccc-cCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhh
Confidence                1122     2566 544 4899999999999 68899999999999999999999999975335689998655 47


Q ss_pred             HHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHH
Q 009414          212 ASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQ  291 (535)
Q Consensus       212 ~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~  291 (535)
                      +++++++. +||.+++.        ...+......+..            .   ..+    ++..++.+.+.+++.+.|+
T Consensus       155 ~~~~vi~~-~~G~~~~~--------~~~~~~~~~~~~~------------~---~~~----~~~~~~~~~~~~~~~~~i~  206 (413)
T 2z36_A          155 VPSLVICE-LLGVPYTD--------HDFFQSRTTMMVS------------R---TSM----EDRRRAFAELRAYIDDLIT  206 (413)
T ss_dssp             HHHHHHHH-HHTCCGGG--------HHHHHHHHHHTTC------------S---SCH----HHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHH-HhCCCHHH--------HHHHHHHHHHHhc------------c---cCc----HHHHHHHHHHHHHHHHHHH
Confidence            99999998 49986543        1222222221110            0   001    3456677788889999998


Q ss_pred             HHHHhhcCCCCCCcHHHHHhccCC-CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcC
Q 009414          292 EHRTTQTSLQRNSDFVDVLLSLSG-PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGR  370 (535)
Q Consensus       292 ~~~~~~~~~~~~~d~l~~ll~~~~-~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  370 (535)
                      +++++.     ..|+++.|++..+ +.+++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++     
T Consensus       207 ~r~~~~-----~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----  276 (413)
T 2z36_A          207 RKESEP-----GDDLFSRQIARQRQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG-----  276 (413)
T ss_dssp             HHHSSC-----CSSHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----
T ss_pred             HHHhCC-----CCCHHHHHHHhhcCCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH-----
Confidence            877532     2399999997642 23699999999999999999999999999999999999999999999963     


Q ss_pred             CCCCChhhccCCCchhHHHHhhhcCCCCCC-cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCc
Q 009414          371 SRPLTESDLQSMVYLPAVVKEVVRLHPPGP-LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPER  449 (535)
Q Consensus       371 ~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  449 (535)
                                   |++|||+|+||++|+++ .+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|||
T Consensus       277 -------------~l~a~i~E~lRl~p~~~~~~--~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR  341 (413)
T 2z36_A          277 -------------RTPMAVEELLRYFTIADGVT--SRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER  341 (413)
T ss_dssp             -------------GHHHHHHHHHHHHCTTTTCE--EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC
T ss_pred             -------------HHHHHHHHHHHhCCCcccce--eeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCC
Confidence                         79999999999999999 55  899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCC-CCCCccccccccccccCcee
Q 009414          450 FVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDY-DPVDLSEVLRLSCEMKNPLT  527 (535)
Q Consensus       450 ~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~  527 (535)
                      |.               ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ .++++.  .+...+....++
T Consensus       342 ~~---------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~--~~~~~~g~~~lp  404 (413)
T 2z36_A          342 GA---------------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMEDVPFK--GDSVIYGVHELP  404 (413)
T ss_dssp             CC---------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBC--TTSSSCCBSCCE
T ss_pred             CC---------------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCCcccceec--ccccccCcceee
Confidence            83               2479999999999999999999999999999999 5888764 222333  333334446777


Q ss_pred             EEEE
Q 009414          528 VRVH  531 (535)
Q Consensus       528 v~~~  531 (535)
                      |++.
T Consensus       405 v~~~  408 (413)
T 2z36_A          405 VTWH  408 (413)
T ss_dssp             EECC
T ss_pred             EEee
Confidence            7654


No 48 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=4.5e-61  Score=487.22  Aligned_cols=423  Identities=15%  Similarity=0.169  Sum_probs=299.4

Q ss_pred             CCCCCCCCCCCCCCcccccccc-----CCChhHHHHHHHHHhcCcc-eEEEEeCCeeE-------EEecCHHHHHHHhcC
Q 009414           64 KACSKPIPGPRGLPFIGSMSLM-----TNLPHHNLAAAAEAYKAKR-VMAFSLGETRV-------IITCSPDVAKEILNS  130 (535)
Q Consensus        64 ~~~~~~~PgP~~~P~iG~~~~~-----~~~~~~~l~~~~~ky~~G~-v~~~~~g~~~~-------vvv~dp~~i~~i~~~  130 (535)
                      ..+.+.||||+++|++||++++     ..+++.++.++++||  |+ ||++++++.++       +++.|++..+.++..
T Consensus        24 ~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~ky--G~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~  101 (495)
T 3dsk_A           24 DLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKY--NSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDV  101 (495)
T ss_dssp             CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHH--TCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCT
T ss_pred             CCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHh--CCceEeecCCCCCCccCCCCEEEEeCCcceeeeccc
Confidence            3467789999999999999877     478999999999999  88 99999998887       666777766666653


Q ss_pred             CCCCCCC----chhhhhhhhcc---cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCC
Q 009414          131 SVFADRP----VKESAYSLMFN---RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGS  201 (535)
Q Consensus       131 ~~~~~~~----~~~~~~~~~~g---~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~  201 (535)
                      +...++.    .+.... .++|   ...++..+|+.|+++|+++ .+.|++.. +.+.+.+++.++++++.|.+.  +++
T Consensus       102 ~~v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~-~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~  178 (495)
T 3dsk_A          102 DKVEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLL-FFLLKSSR-NRIFPEFQATYSELFDSLEKELSLKG  178 (495)
T ss_dssp             TTEECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHH-HHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ccccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            2211111    111111 2333   2333456899999999999 57788754 889999999999999999763  356


Q ss_pred             ceeHHHHHHHHHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhcccccccccccccc-ccchhHHHHHHHHhhH
Q 009414          202 AFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA-DFDLQKVRLRSSKLVP  280 (535)
Q Consensus       202 ~vdl~~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-~l~~~~~~~~~~~~~~  280 (535)
                      ++|+.+++..+++++++.++||.+++.....  .....+.+   .......       .|++. .+ +........+.++
T Consensus       179 ~vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~--~~~~~~~~---~~~~~~~-------~p~~~~~~-p~~~~~~~~~~~~  245 (495)
T 3dsk_A          179 KADFGGSSDGTAFNFLARAFYGTNPADTKLK--ADAPGLIT---KWVLFNL-------HPLLSIGL-PRVIEEPLIHTFS  245 (495)
T ss_dssp             SEESHHHHHHHHHHHHHHHHHSCCGGGSTTT--TCHHHHHH---HHHHHHH-------GGGCCCSS-CHHHHHHHHSSSC
T ss_pred             CccHHHHHHHHHHHHHHHHHcCCCcchhhhh--hhHHHHHH---HHHHHhh-------hhHhHhcc-HHHHHHHHHHhhc
Confidence            8999999999999999999999988763111  12222222   2211100       11111 11 1000000000000


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCCCCCCHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHh-ChHHHH
Q 009414          281 QVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMI-FRGTDTVAILIEWILARMVL-HPDIQS  358 (535)
Q Consensus       281 ~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~-~aG~~tta~~l~~~l~~L~~-~p~~~~  358 (535)
                      .-...+....++..+...      +.++.+++..++.+++++|+..+++.++ +||+|||+.+++|++++|+. ||++|+
T Consensus       246 ~~~~~~~~~~~~~~~~~~------~~~~~ll~~~~~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~  319 (495)
T 3dsk_A          246 LPPALVKSDYQRLYEFFL------ESAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHN  319 (495)
T ss_dssp             CCGGGGHHHHHHHHHHHH------HHCHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred             ccchhhhhhHHHHHHHHH------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHH
Confidence            000000000000000000      2233344433445789999998766665 99999999999999999996 999999


Q ss_pred             HHHHHHHHhhcCC-CCCChhhccCCCchhHHHHhhhcCCCCCCccccccccccccee----cCeeeCCCCEEEEehhhhh
Q 009414          359 KVHSELDQVVGRS-RPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTV----DHYHVPAGTTAMVNIWAIM  433 (535)
Q Consensus       359 ~lr~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~----~g~~ip~G~~v~~~~~~~~  433 (535)
                      +||+|++++++++ +.++++++++||||+|||+|+||++|+++..  .|.+.+|+++    +||.||||+.|.++.+++|
T Consensus       320 ~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~--~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~  397 (495)
T 3dsk_A          320 RLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQ--YGRAKKDLVIESHDAAFKVKAGEMLYGYQPLAT  397 (495)
T ss_dssp             HHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEE--EEEESSCEEEECSSCEEEECTTCEEEEEHHHHH
T ss_pred             HHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCcccc--ceeecCCeEeccCCCceEECCCCEEEeccHHhh
Confidence            9999999998754 7799999999999999999999999999987  5779999999    4999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCccCCCCCCCc-cccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcceeeecCCCCCCc
Q 009414          434 RDPEIYADPLKFMPERFVNPEAADM-DISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFKWVQSDYDPVDL  512 (535)
Q Consensus       434 ~d~~~~~~p~~F~P~R~l~~~~~~~-~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~  512 (535)
                      +||++|+||++|+|+||++++.... .....+....++|||+|+|.|||++||++|++++++.|+++|++...++++.++
T Consensus       398 ~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~  477 (495)
T 3dsk_A          398 RDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPL  477 (495)
T ss_dssp             TCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred             CCcccCCCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCCCCccc
Confidence            9999999999999999997531110 000011112355666666999999999999999999999999998765433333


No 49 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=4.2e-60  Score=477.60  Aligned_cols=412  Identities=15%  Similarity=0.182  Sum_probs=297.0

Q ss_pred             CCCCCCCCCCCCCcccccccc-----CC-ChhHHHHHHHHHhcCcc-eEEEEeCCe-------eEEEecCHHHHHHHhcC
Q 009414           65 ACSKPIPGPRGLPFIGSMSLM-----TN-LPHHNLAAAAEAYKAKR-VMAFSLGET-------RVIITCSPDVAKEILNS  130 (535)
Q Consensus        65 ~~~~~~PgP~~~P~iG~~~~~-----~~-~~~~~l~~~~~ky~~G~-v~~~~~g~~-------~~vvv~dp~~i~~i~~~  130 (535)
                      .+++.||||+++|++||++++     .. +++.++.++++||  |+ ||++++++.       .++++.|++..+.++..
T Consensus         6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~ky--G~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~   83 (473)
T 3dan_A            6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKY--QSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDV   83 (473)
T ss_dssp             SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHH--TCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCT
T ss_pred             CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHh--CCeEEEecCCCCCccccCCceEEeecccccceecCC
Confidence            467889999999999999875     35 7899999999999  88 999999744       33444555555455542


Q ss_pred             CCCCCCCc----hhhhhhhhcc--cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhh--CCCc
Q 009414          131 SVFADRPV----KESAYSLMFN--RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY--GGSA  202 (535)
Q Consensus       131 ~~~~~~~~----~~~~~~~~~g--~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~  202 (535)
                      ....+...    .........|  ...++..+|+.|+++|+++ .+.|++ .++.+.+.+++.++++++.|.+.  ++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~h~~~R~~~-~~~f~~-~~~~~~~~i~~~~~~ll~~~~~~~~~~~~  161 (473)
T 3dan_A           84 SKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLL-FFMLKN-SSNRVIPQFETTYTELFEGLEAELAKNGK  161 (473)
T ss_dssp             TTEECSSCTTSSSCCCGGGGTTSCCGGGCCTTSHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             cceeccccccccccCCccccCCCcceeeeCCCcHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence            11111111    1111122222  2333456899999999999 688998 48999999999999999999753  3568


Q ss_pred             eeHHHHHHHHHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhcccccccccccccc-ccchhHHHHHH------
Q 009414          203 FRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA-DFDLQKVRLRS------  275 (535)
Q Consensus       203 vdl~~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-~l~~~~~~~~~------  275 (535)
                      +|+.+++..+++++++.++||.+++..  ........+........          .+|++. .++  ......      
T Consensus       162 vdl~~~~~~~~~~~i~~~~~G~~~~~~--~~~~~~~~~~~~~~~~~----------~~p~~~~~lp--~~~~~~~~~~~~  227 (473)
T 3dan_A          162 AAFNDVGEQAAFRFLGRAYFNSNPEET--KLGTSAPTLISSWVLFN----------LAPTLDLGLP--WFLQEPLLHTFR  227 (473)
T ss_dssp             EECHHHHHHHHHHHHHHHHHSCCGGGS--TTTTCHHHHHHHHHHHH----------HGGGCCCSCC--HHHHHHHHSSSC
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCCCch--hhhhhHHHHHHHHHHHh----------ccchhhhcch--HHHHHHHhhhcc
Confidence            999999999999999999999988762  11112222222111110          112211 111  000000      


Q ss_pred             ------HHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCCCCCCHHHHHHHHHHHH-HhccccHHHHHHHHHH
Q 009414          276 ------SKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMI-FRGTDTVAILIEWILA  348 (535)
Q Consensus       276 ------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~-~aG~~tta~~l~~~l~  348 (535)
                            .+..+.+.+++.                 |+++.+++..++.+++++++..+++.++ ++|++||+++++|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~-----------------~~~~~ll~~~~~~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~  290 (473)
T 3dan_A          228 LPAFLIKSTYNKLYDYFQ-----------------SVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLK  290 (473)
T ss_dssp             CCGGGTHHHHHHHHHHHH-----------------HHCHHHHHHHHHHTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             chHhhhhhchhhhHHHHH-----------------HHHHHHHHhHhhcCCCHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence                  011111111111                 4455555544445789999998886666 7888889999999999


Q ss_pred             HHHh-ChHHHHHHHHHHHHhhcC--CCCCChhhccCCCchhHHHHhhhcCCCCCCccccccccccccee----cCeeeCC
Q 009414          349 RMVL-HPDIQSKVHSELDQVVGR--SRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTV----DHYHVPA  421 (535)
Q Consensus       349 ~L~~-~p~~~~~lr~Ei~~~~~~--~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~----~g~~ip~  421 (535)
                      +|++ ||++|++||+|+++++++  +..++++++++||||+|||+|+||++|+++..  .|.+.+|+++    +||.|||
T Consensus       291 ~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~--~r~~~~d~~l~~~~~g~~Ip~  368 (473)
T 3dan_A          291 WIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQ--YGKAKSNFTIESHDATFEVKK  368 (473)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEE--EEEESSCEEEECSSCEEEECT
T ss_pred             HHHhcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCcccc--cccccCCcEeecCCCceEeCC
Confidence            9999 899999999999999764  37899999999999999999999999999987  5779999999    9999999


Q ss_pred             CCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcce
Q 009414          422 GTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFK  501 (535)
Q Consensus       422 G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~  501 (535)
                      |+.|.++.+++|+||++|+||++|||+||++++.........+....+++||+|+|.|+|++||++|++++++.|+++|+
T Consensus       369 G~~v~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~  448 (473)
T 3dan_A          369 GEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYD  448 (473)
T ss_dssp             TCEEEEEHHHHTTCTTTSSSTTSCCTTTTSGGGGGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEE
T ss_pred             CCEEEechHHhhCCchhcCCcccCCccccCCCcccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999975211100000111123455555669999999999999999999999999


Q ss_pred             eeecCCCCCCcc
Q 009414          502 WVQSDYDPVDLS  513 (535)
Q Consensus       502 ~~~~~~~~~~~~  513 (535)
                      +...++++.++.
T Consensus       449 ~~~~~~~~~~~~  460 (473)
T 3dan_A          449 SFEIELGESPLG  460 (473)
T ss_dssp             EEEEEEECCSSS
T ss_pred             eEEccCCccccc
Confidence            887665444443


No 50 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=2e-59  Score=463.10  Aligned_cols=378  Identities=16%  Similarity=0.179  Sum_probs=300.2

Q ss_pred             CCChhHHHHHHHHHhcCcceEEEEeC--CeeEEEecCHHHHHHHhcCCCCCCCCch--------hhh-------hhhhcc
Q 009414           86 TNLPHHNLAAAAEAYKAKRVMAFSLG--ETRVIITCSPDVAKEILNSSVFADRPVK--------ESA-------YSLMFN  148 (535)
Q Consensus        86 ~~~~~~~l~~~~~ky~~G~v~~~~~g--~~~~vvv~dp~~i~~i~~~~~~~~~~~~--------~~~-------~~~~~g  148 (535)
                      ..+++.++.+++ +|  |||+++++|  +.++++|+||+.+++|+.+..|++++..        ...       .....|
T Consensus        19 ~~~p~~~~~~l~-~~--Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (425)
T 2z3t_A           19 IADPYPVYRRYR-EA--APVHRTASGPGKPDTYYVFTYDDVVRVLSNRRLGRNARVASGDTDTAPVPIPTEHRALRTVVE   95 (425)
T ss_dssp             HHCCHHHHHHHH-HH--CSEEEECCCSSCCCEEEECSHHHHHHHHHCTTEESSCCCC---------------CHHHHHHT
T ss_pred             hcChHHHHHHHH-hc--CCeEeccccCCCCCeEEEcCHHHHHHHHcCCCccccccccccccccccccccccccccccccc
Confidence            457889999986 59  999999987  7789999999999999987677777531        111       112234


Q ss_pred             cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHH-HHHHHHHHHHHHHhccccc
Q 009414          149 RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDI-LKPASLNNMMCSVFGRKYA  227 (535)
Q Consensus       149 ~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~-~~~~~~~vi~~~~fG~~~~  227 (535)
                      .++++. +|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+.  +++|+.+. ...+++++++.+ ||.+.+
T Consensus        96 ~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--g~~dl~~~~~~~~~~~vi~~~-~G~~~~  170 (425)
T 2z3t_A           96 NWLVFL-DPPHHTELRSLL-TTEFSPSIVTGLRPRIAELASALLDRLRAQ--RRPDLVEGFAAPLPILVISAL-LGIPEE  170 (425)
T ss_dssp             TCGGGC-CHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTS--SSCBHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred             cccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc--CCccHHHHHHHHHHHHHHHHH-hCCCHH
Confidence            666555 899999999999 689999999999999999999999999652  37999874 578999999998 998754


Q ss_pred             ccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHH
Q 009414          228 LLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFV  307 (535)
Q Consensus       228 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l  307 (535)
                      .        ...+...........      +.+|    + +....++..++.+.+.+++.+.|++++++.     ..|++
T Consensus       171 ~--------~~~~~~~~~~~~~~~------~~~~----~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~dll  226 (425)
T 2z3t_A          171 D--------HTWLRANAVALQEAS------TTRA----R-DGRGYARAEAASQEFTRYFRREVDRRGGDD-----RDDLL  226 (425)
T ss_dssp             G--------HHHHHHHHHHHHTTC------TTCC----C----HHHHHHHHHHHHHHHHHHHHCC------------CHH
T ss_pred             H--------HHHHHHHHHHHHhhc------cccC----C-CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCCHH
Confidence            3        223333333333211      1112    1 112334566777888889999888776532     23999


Q ss_pred             HHHhccCC-CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchh
Q 009414          308 DVLLSLSG-PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLP  386 (535)
Q Consensus       308 ~~ll~~~~-~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~  386 (535)
                      +.|++... +.+++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++                  ||+
T Consensus       227 ~~ll~~~~~~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~  288 (425)
T 2z3t_A          227 TLLVRARDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE------------------STP  288 (425)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHH
T ss_pred             HHHHHhhccCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH------------------hHH
Confidence            99998643 34699999999999999999999999999999999999999999999964                  899


Q ss_pred             HHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCC
Q 009414          387 AVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSD  466 (535)
Q Consensus       387 a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~  466 (535)
                      |||+|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||.               
T Consensus       289 a~i~E~lRl~p~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------------  351 (425)
T 2z3t_A          289 AAVEELMRYDPPVQAV--TRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA---------------  351 (425)
T ss_dssp             HHHHHHHHHSCSBCEE--EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS---------------
T ss_pred             HHHHHHHHhCCcccCc--ceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC---------------
Confidence            9999999999999965  89999999999999999999999999999999999999999999994               


Q ss_pred             CceeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEec
Q 009414          467 LRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR  533 (535)
Q Consensus       467 ~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  533 (535)
                      ..++|||.|+|.|+|++||++|++++++.|+++| +++ .++...  ......+.++..+++|++++.
T Consensus       352 ~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~--~~~~~~~~~~~~~lpv~~~~~  416 (425)
T 2z3t_A          352 ERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHEV--EYADDMVFHGPTRLLLDLPDA  416 (425)
T ss_dssp             SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEE--EECSCSSBCCEEEEEECCC--
T ss_pred             CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCcc--ccccccccCCcceeeEEecch
Confidence            2489999999999999999999999999999999 899 653211  223345556778888887764


No 51 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=4.4e-59  Score=460.36  Aligned_cols=379  Identities=17%  Similarity=0.205  Sum_probs=306.7

Q ss_pred             cCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCc-----hh-h-hhhhh--c-ccceeeC
Q 009414           85 MTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPV-----KE-S-AYSLM--F-NRAIGFA  154 (535)
Q Consensus        85 ~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~-----~~-~-~~~~~--~-g~~~~~~  154 (535)
                      +..+++.++.++ ++|  |+|++ + ++.++++|+||+.+++|+.+..|++++.     +. . ....+  . +.++++ 
T Consensus        24 ~~~~p~~~~~~l-~~~--Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-   97 (419)
T 1q5d_A           24 YAEDPFPAIERL-REA--TPIFY-W-DEGRSWVLTRYHDVSAVFRDERFAVSREEWESSAEYSSAIPELSDMKKYGLFG-   97 (419)
T ss_dssp             TTTCCHHHHHHH-HHH--CSEEE-E-TTTTEEEECSHHHHHHHHTCTTEECCGGGSTTHHHHHHSSGGGHHHHHHSTTT-
T ss_pred             hhhChHHHHHHH-Hhh--CCccc-c-CCCCEEEEecHHHHHHHHcCCCccccccccccccccccccchhhhhccccccc-
Confidence            456899999999 789  99998 5 7778899999999999998655888762     11 1 11121  1 445544 


Q ss_pred             cCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHH-HHHHHHHHHHHHHHhcccccccCCCC
Q 009414          155 PYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRD-ILKPASLNNMMCSVFGRKYALLGYSS  233 (535)
Q Consensus       155 ~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~-~~~~~~~~vi~~~~fG~~~~~l~~~~  233 (535)
                      .+|+.|+++|+.+ .+.|+++.++.+.+.+++.++++++.+.+  ++.+|+.. +...+++++++.+ ||.+++.     
T Consensus        98 ~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~-----  168 (419)
T 1q5d_A           98 LPPEDHARVRKLV-NPSFTSRAIDLLRAEIQRTVDQLLDARSG--QEEFDVVRDYAEGIPMRAISAL-LKVPAEC-----  168 (419)
T ss_dssp             SCHHHHHHHHHHH-GGGGSHHHHGGGHHHHHHHHHHHHHHHTT--SSCEETTTTTGGGSHHHHHHHH-TTCCGGG-----
T ss_pred             CCchHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH-hCCCHHH-----
Confidence            4899999999999 68999999999999999999999999965  34799886 4589999999998 9987643     


Q ss_pred             chHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCC-cHHHHHhc
Q 009414          234 NTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNS-DFVDVLLS  312 (535)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-d~l~~ll~  312 (535)
                         ...+......+.....    ...+|+..     ...++..++...+.+++.+.|++++++     ... |+++.|++
T Consensus       169 ---~~~~~~~~~~~~~~~~----~~~~P~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~~dll~~ll~  231 (419)
T 1q5d_A          169 ---DEKFRRFGSATARALG----VGLVPRVD-----EETKTLVASVTEGLALLHGVLDERRRN-----PLENDVLTMLLQ  231 (419)
T ss_dssp             ---HHHHHHHHHHHHHHTT----TTTSSCCC-----SCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSCHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHhcc----cccccCCh-----HHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCCHHHHHHh
Confidence               2233333443333221    11234321     112455677788899999999988763     234 89999998


Q ss_pred             cCC-CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHh
Q 009414          313 LSG-PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKE  391 (535)
Q Consensus       313 ~~~-~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E  391 (535)
                      ... +.+++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+|||+|
T Consensus       232 ~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E  293 (419)
T 1q5d_A          232 AEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG------------------LMRNALDE  293 (419)
T ss_dssp             HHHSSTTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHH
T ss_pred             hhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHH
Confidence            643 33699999999999999999999999999999999999999999999952                  89999999


Q ss_pred             hhcCCCCCC-cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCcee
Q 009414          392 VVRLHPPGP-LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLA  470 (535)
Q Consensus       392 tlRl~~~~~-~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~  470 (535)
                      +||++|+++ .+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||  +             ..++
T Consensus       294 ~lRl~p~~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--~-------------~~~l  356 (419)
T 1q5d_A          294 VLRFDNILRIGT--VRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD--T-------------SASL  356 (419)
T ss_dssp             HHHHSCSBSSEE--EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC--C-------------TTCC
T ss_pred             HHHhCCcccccc--ceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC--C-------------CCCC
Confidence            999999999 55  8999999999999999999999999999999999999999999994  1             2589


Q ss_pred             ccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          471 PFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       471 ~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      |||.|+|.|+|++||++|++++++.|+++| ++++.++  .++  ......++..+++|++++|.
T Consensus       357 ~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~--~~~~~~~~~~~l~v~~~~r~  417 (419)
T 1q5d_A          357 AYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKET--PVF--GYHPAFRNIESLNVILKPSK  417 (419)
T ss_dssp             TTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC--CEE--CCCSSBCCEEECEEESSCC-
T ss_pred             CCCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCC--ccc--ccccccCCCceeEEEEecCC
Confidence            999999999999999999999999999999 8999874  222  23455667789999999885


No 52 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=8.5e-60  Score=463.24  Aligned_cols=372  Identities=16%  Similarity=0.187  Sum_probs=300.3

Q ss_pred             CChhHHHHHHHHHhcCcceEEEEeCC--eeEEEecCHHHHHHHhcCCCCCCCCchhh---hhhhhc---ccceeeCcCCh
Q 009414           87 NLPHHNLAAAAEAYKAKRVMAFSLGE--TRVIITCSPDVAKEILNSSVFADRPVKES---AYSLMF---NRAIGFAPYGV  158 (535)
Q Consensus        87 ~~~~~~l~~~~~ky~~G~v~~~~~g~--~~~vvv~dp~~i~~i~~~~~~~~~~~~~~---~~~~~~---g~~~~~~~~g~  158 (535)
                      ++++.++.+++ +|  |||+++++++  .++++|+||+.+++|+.+..|++++....   ......   +.+++ ..+|+
T Consensus        27 ~~p~~~~~~l~-~~--Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~-~~dg~  102 (411)
T 2dkk_A           27 PEFDPVLAELM-RE--GPLTRVRLPHGEGWAWLATRYDDVKAITNDPRFGRAEVTQRQITRLAPHFKPRPGSLA-FADQP  102 (411)
T ss_dssp             SCCCHHHHHHH-TT--CSEEEEECSBSBSCEEEECSHHHHHHHTTCTTEESGGGGGSCBCBSSSCCCCCTTCST-TCCTT
T ss_pred             ccccHHHHHHH-hc--CCeEeeecCCCceeEEEEcCHHHHHHHHcCCCcccCCCCCCCccccccchhccccccc-cCCch
Confidence            56779999998 79  9999999865  67899999999999998766766644321   111121   45554 45999


Q ss_pred             hHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHH-HHHHHHHHHHHhcccccccCCCCchHH
Q 009414          159 YWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILK-PASLNNMMCSVFGRKYALLGYSSNTEA  237 (535)
Q Consensus       159 ~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~-~~~~~vi~~~~fG~~~~~l~~~~~~~~  237 (535)
                      .|+++|+.+ .+.|+++.++.+.+.+.+.++++++.|.+. ++++|+.+.+. .+++++++. +||.+++.        .
T Consensus       103 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--------~  171 (411)
T 2dkk_A          103 DHNRLRRAV-AGAFTVGATKRLRPRAQEILDGLVDGILAE-GPPADLVERVLEPFPIAVVSE-VMGVPAAD--------R  171 (411)
T ss_dssp             HHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHH-CSCEEHHHHTTTHHHHHHHHH-HHTCCSSH--------H
T ss_pred             HHHHHHHHh-hHhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHH-HhCCCHHH--------H
Confidence            999999999 689999999999999999999999999763 45799997775 799999998 59976532        2


Q ss_pred             HHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCCC
Q 009414          238 RRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD  317 (535)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~  317 (535)
                      ..+.....    .+..     ..+         ..++..++.+.+.+++.+.|++++++     ...|+++.|++..++.
T Consensus       172 ~~~~~~~~----~~~~-----~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~-----~~~dll~~ll~~~~~~  228 (411)
T 2dkk_A          172 ERVHSWTR----QIIS-----TSG---------GAEAAERAKRGLYGWITETVRARAGS-----EGGDVYSMLGAAVGRG  228 (411)
T ss_dssp             HHHHHHHG----GGCS-----SCS---------CSHHHHHHHHHHHHHHHHHHHTTTTC-----CSSCHHHHHHHHHHTT
T ss_pred             HHHHHHHH----HHHh-----ccc---------hHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHhcCCC
Confidence            22222211    1111     111         01344566777888888888876543     2239999999862233


Q ss_pred             CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCC
Q 009414          318 RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHP  397 (535)
Q Consensus       318 ~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~  397 (535)
                      +++++++.+++..+++|| |||+++++|++++|++||++|++|++|++                  |++|||+|+||++|
T Consensus       229 ~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p  289 (411)
T 2dkk_A          229 EVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG------------------ARGTALDELLRWIS  289 (411)
T ss_dssp             SSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT------------------CCHHHHHHHHHHSC
T ss_pred             CCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHhhCC
Confidence            699999999999999999 99999999999999999999999999974                  79999999999999


Q ss_pred             CCC-c-ccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCC
Q 009414          398 PGP-L-LSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSG  475 (535)
Q Consensus       398 ~~~-~-~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G  475 (535)
                      +++ . +  +|.+.+|++++|+.||||+.|.++.+++|+||++|+||++|+|+||.               ..++|||.|
T Consensus       290 ~~~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~---------------~~~l~FG~G  352 (411)
T 2dkk_A          290 HRTSVGL--ARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP---------------NPHLAYGNG  352 (411)
T ss_dssp             CBSSCCC--CEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS---------------CCCCTTCCS
T ss_pred             ccccCcc--ceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC---------------CCCCCCCCC
Confidence            999 5 5  89999999999999999999999999999999999999999999994               248999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEec
Q 009414          476 RRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR  533 (535)
Q Consensus       476 ~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  533 (535)
                      +|.|+|++||++|++++++.|+++| ++++.++. .++....+...++..+++|++++|
T Consensus       353 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~~~lpv~~~~R  410 (411)
T 2dkk_A          353 HHFCTGAVLARMQTELLVDTLLERLPGLRLAVPA-EQVAWRRKTMIRGPRTLPCTWHHH  410 (411)
T ss_dssp             TTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG-GGCCBCCSSSBCCBSCCEEECCCC
T ss_pred             CCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCc-cccccccCcccCCcceeEEEeccC
Confidence            9999999999999999999999999 99998742 122223344556778999999877


No 53 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=9.7e-59  Score=456.61  Aligned_cols=374  Identities=16%  Similarity=0.218  Sum_probs=301.2

Q ss_pred             ccCCChhHHHHHHHHHhcCcceEEEEe-CCeeEEEecCHHHHHHHhcCCCCCCCCch-hhh--hhh-hcccceeeCcCCh
Q 009414           84 LMTNLPHHNLAAAAEAYKAKRVMAFSL-GETRVIITCSPDVAKEILNSSVFADRPVK-ESA--YSL-MFNRAIGFAPYGV  158 (535)
Q Consensus        84 ~~~~~~~~~l~~~~~ky~~G~v~~~~~-g~~~~vvv~dp~~i~~i~~~~~~~~~~~~-~~~--~~~-~~g~~~~~~~~g~  158 (535)
                      .+..+++.++.++ ++|  |||+++++ |+.++++|+||+.+++|+.+..|.+++.. ..+  ... ..+.++++ .+|+
T Consensus        34 ~~~~~p~~~~~~l-~~y--Gpv~~~~~~g~~~~vvv~~~~~i~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~l~~-~dg~  109 (417)
T 2y5n_A           34 VHGLTLAGRYGEL-QET--EPVSRVRPPYGEEAWLVTRYEDVRAVLGDGRFVRGPSMTRDEPRTRPEMVKGGLLS-MDPP  109 (417)
T ss_dssp             SSSCCCCHHHHHH-HHH--CSEEEEECSBSCCEEEECSHHHHHHHHTCTTEESGGGGTSCCCBSSSSCCCCSGGG-CCTT
T ss_pred             hhccCchHHHHHH-Hhc--CCeEeeccCCCceEEEECCHHHHHHHHcCCCcccCccccccccccCcccccccCcc-CCch
Confidence            3456899999999 899  99999997 89999999999999999987667665433 111  111 13455544 4999


Q ss_pred             hHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCCchHH
Q 009414          159 YWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSSNTEA  237 (535)
Q Consensus       159 ~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~~~~~  237 (535)
                      .|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+ +++++|+.+.+ ..+++++++. +||.+++.        .
T Consensus       110 ~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~--------~  178 (417)
T 2y5n_A          110 EHSRLRRLV-VKAFTARRAESLRPRAREIAHELVDQMAA-TGQPADLVAMFARQLPVRVICE-LLGVPSAD--------H  178 (417)
T ss_dssp             HHHHHHHHH-HHHSCHHHHHHTHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG--------H
T ss_pred             HHHHHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh-CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH--------H
Confidence            999999999 67899999999999999999999999975 22279998766 5699999997 69987543        1


Q ss_pred             HHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCC-
Q 009414          238 RRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGP-  316 (535)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~-  316 (535)
                      ..+.........    .  ..       . +   .++..++.+.+.+++.+.|++++++.    . .|+++.|++..++ 
T Consensus       179 ~~~~~~~~~~~~----~--~~-------~-~---~~~~~~~~~~l~~~~~~~i~~r~~~~----~-~dll~~ll~~~~~~  236 (417)
T 2y5n_A          179 DRFTRWSGAFLS----T--AE-------V-T---AEEMQEAAEQAYAYMGDLIDRRRKEP----T-DDLVSALVQARDQQ  236 (417)
T ss_dssp             HHHHHHHHTTST----T--CC-------C-C---HHHHHHHHHHHHHHHHHHHHHHHHSC----C-SSHHHHHHHCCBTT
T ss_pred             HHHHHHHHHHhc----c--cC-------C-C---HHHHHHHHHHHHHHHHHHHHHHHhCC----C-CCHHHHHHhhhccC
Confidence            223222221111    0  00       0 1   13556677888899999999887642    2 3999999987543 


Q ss_pred             CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCC
Q 009414          317 DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLH  396 (535)
Q Consensus       317 ~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~  396 (535)
                      .+++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++                  ||+|||+|+||++
T Consensus       237 ~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~  298 (417)
T 2y5n_A          237 DSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE------------------LIPSAVEELTRWV  298 (417)
T ss_dssp             BCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHhc
Confidence            3699999999999999999999999999999999999999999999863                  7999999999999


Q ss_pred             CCCC--cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCC
Q 009414          397 PPGP--LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGS  474 (535)
Q Consensus       397 ~~~~--~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~  474 (535)
                      |+++  .+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||.               ..++|||.
T Consensus       299 p~~~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------------~~~lpFG~  361 (417)
T 2y5n_A          299 PLGVGTAF--PRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP---------------NQHLGFGH  361 (417)
T ss_dssp             CCBSSCCS--CEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS---------------CCCCTTCC
T ss_pred             CCcccccc--ceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC---------------CCcCCCCC
Confidence            9999  55  89999999999999999999999999999999999999999999982               24899999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEE
Q 009414          475 GRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRV  530 (535)
Q Consensus       475 G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  530 (535)
                      |+|.|+|++||++|++++++.|+++| ++++.++. .++....+...+....++|++
T Consensus       362 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          362 GVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPE-TQLRWSEGMLLRGPLELPVVW  417 (417)
T ss_dssp             STTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG-GGCCBCCCSSBCCBSCCEEEC
T ss_pred             CCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCC-ccceeccCcccCCcceeEEeC
Confidence            99999999999999999999999999 58987641 122233344455667777763


No 54 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=2.2e-58  Score=451.82  Aligned_cols=367  Identities=16%  Similarity=0.174  Sum_probs=299.5

Q ss_pred             cCCChhHHHHHHHHHhcCcceEEEEe-CCeeEEEecCHHHHHHHhcCCCCCCCCchhhhh-hhhcccc--eeeCcCC---
Q 009414           85 MTNLPHHNLAAAAEAYKAKRVMAFSL-GETRVIITCSPDVAKEILNSSVFADRPVKESAY-SLMFNRA--IGFAPYG---  157 (535)
Q Consensus        85 ~~~~~~~~l~~~~~ky~~G~v~~~~~-g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~-~~~~g~~--~~~~~~g---  157 (535)
                      +..+++.++.++ ++|  |||+++++ |+.++++|+||+.+++|+.+..|++++...... ....+.+  +++ .+|   
T Consensus        24 ~~~~p~~~~~~l-~~y--Gpv~~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~   99 (404)
T 2xbk_A           24 KMLKLSPLLRAL-QDR--GPIHRVRTPAGDEAWLVTRHAELKQLLHDERIGRTHPDPPSAAQYVRSPFLDLLI-SDADAE   99 (404)
T ss_dssp             BTTBCCHHHHHH-HHH--CSEEEEECTTSCEEEEECSHHHHHHHTTCTTEESBCSSGGGSCCSSCCHHHHTTC-BCSCHH
T ss_pred             cccCccHHHHHH-Hhh--CCEeeeccCCCceEEEEcCHHHHHHHHcCCCCCCCccccccCCccccccccccee-eCCCCC
Confidence            456789999999 899  99999997 899999999999999999876677665443211 1123445  544 489   


Q ss_pred             ---hhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCC
Q 009414          158 ---VYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSS  233 (535)
Q Consensus       158 ---~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~  233 (535)
                         +.|+++|+.+ .+.|+++.++.+.+.+++.++++++.+.+ .++++|+.+.+ ..+++++++. +||.+++.     
T Consensus       100 ~~~~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-----  171 (404)
T 2xbk_A          100 SGRRQHAETRRLL-TPLFSARRVLEMQPKVEEAADTLLDAFIA-QGPPGDLHGELTVPFALTVLCE-VIGVPPQR-----  171 (404)
T ss_dssp             HHHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH-TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG-----
T ss_pred             CCCchHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH-----
Confidence               9999999999 68999999999999999999999999975 45589998665 5799999997 79987543     


Q ss_pred             chHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhcc
Q 009414          234 NTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSL  313 (535)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~  313 (535)
                         ...+..........   .           . + +   +..++.+.+.+++.+.|++++++.    . .|+++.| + 
T Consensus       172 ---~~~~~~~~~~~~~~---~-----------~-~-p---~~~~~~~~~~~~~~~~i~~r~~~~----~-~dll~~l-~-  222 (404)
T 2xbk_A          172 ---RAELTTLLAGIAKL---D-----------D-R-E---GAVRAQDDLFGYVAGLVEHKRAEP----G-PDIISRL-N-  222 (404)
T ss_dssp             ---HHHHHHHHHHHTBS---S-----------C-H-H---HHHHHHHHHHHHHHHHHHHHHHSC----C-SSHHHHH-H-
T ss_pred             ---HHHHHHHHHHHHhc---c-----------C-c-H---HHHHHHHHHHHHHHHHHHHHHhCC----C-CCHHHHh-h-
Confidence               22333333332210   0           0 1 1   445667788889999999887642    2 3899998 3 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhh
Q 009414          314 SGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVV  393 (535)
Q Consensus       314 ~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~Etl  393 (535)
                       ++ +++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+|||+|+|
T Consensus       223 -~~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~l  282 (404)
T 2xbk_A          223 -DG-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD------------------VMARAVEEVL  282 (404)
T ss_dssp             -SS-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH------------------HHHHHHHHHH
T ss_pred             -cC-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHH
Confidence             22 799999999999999999999999999999999999999999999975                  6899999999


Q ss_pred             cCCCCCC--cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceec
Q 009414          394 RLHPPGP--LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAP  471 (535)
Q Consensus       394 Rl~~~~~--~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~  471 (535)
                      |++|+++  .+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||.               ..++|
T Consensus       283 Rl~p~~~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------------~~~lp  345 (404)
T 2xbk_A          283 RTARAGGSVLP--PRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP---------------NPHLT  345 (404)
T ss_dssp             HHSCSSCCBCS--CEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS---------------CCCCT
T ss_pred             HhCCCcccccc--ceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC---------------CCCCC
Confidence            9999999  55  89999999999999999999999999999999999999999999983               25899


Q ss_pred             cCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEE
Q 009414          472 FGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRV  530 (535)
Q Consensus       472 Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  530 (535)
                      ||.|+|.|+|++||++|++++++.|+++| ++++.++. .++....+...+....++|++
T Consensus       346 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          346 FGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPV-EQLRLKEGQLSGGFAELRVVW  404 (404)
T ss_dssp             TEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCG-GGCCBCSSBTTCCBSCCEEEC
T ss_pred             CCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCC-CcceeccCcccCCcceeeeeC
Confidence            99999999999999999999999999999 79987641 222333445556667777763


No 55 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=5.7e-59  Score=461.25  Aligned_cols=391  Identities=15%  Similarity=0.156  Sum_probs=305.7

Q ss_pred             CCCCCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEE--------eCCeeEEEecCHHHHHHHhcC-CCCCCCC
Q 009414           67 SKPIPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFS--------LGETRVIITCSPDVAKEILNS-SVFADRP  137 (535)
Q Consensus        67 ~~~~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~--------~g~~~~vvv~dp~~i~~i~~~-~~~~~~~  137 (535)
                      ...||+|.++++++....-..+++..+.++ ++|  |||+++.        +|+.++++|+||+.+++|+++ ..|++++
T Consensus        17 ~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~--gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~~~fs~~~   93 (433)
T 3ivy_A           17 VPSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSA--APIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHSDVFSSYE   93 (433)
T ss_dssp             ---CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHH--CSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCTTTEESTT
T ss_pred             cCCCCCCCCCCCCCHHHhhcCCccHHHHHH-Hhc--CCEEecccccccccccCCCCEEEEecHHHHHHHHcChhhccCCc
Confidence            445777877887776554446799999999 789  9999998        566789999999999999986 4577665


Q ss_pred             chhhh---------hhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHH
Q 009414          138 VKESA---------YSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDI  208 (535)
Q Consensus       138 ~~~~~---------~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~  208 (535)
                      .....         .....+.+++ ..+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+  ++.+|+...
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~l~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~  169 (433)
T 3ivy_A           94 NGVIPRFKNDIAREDIEVQRFVML-NMDAPHHTRLRKII-SRGFTPRAVGRLHDELQERAQKIAAEAAA--AGSGDFVEQ  169 (433)
T ss_dssp             TCSCCCCCTTCCHHHHHGGGGSGG-GCCTTHHHHHHHHH-GGGSCHHHHHTTHHHHHHHHHHHHHHHHH--HCEEEHHHH
T ss_pred             ccccccccccccccccccccCCcc-ccChHHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhh--CCCeeHHHH
Confidence            43221         1122345554 45999999999999 78999999999999999999999999975  457999888


Q ss_pred             H-HHHHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHH
Q 009414          209 L-KPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVN  287 (535)
Q Consensus       209 ~-~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~  287 (535)
                      + ..+++++++.+ ||.+.        ++...+.+....    +..    ...|....       .+..++.+.+.+++.
T Consensus       170 ~~~~~~~~vi~~l-~G~~~--------~~~~~~~~~~~~----~~~----~~~p~~~~-------~~~~~~~~~~~~~~~  225 (433)
T 3ivy_A          170 VSCELPLQAIAGL-LGVPQ--------EDRGKLFHWSNE----MTG----NEDPEYAH-------IDPKASSAELIGYAM  225 (433)
T ss_dssp             TTSHHHHHHHHHH-HTCCH--------HHHHHHHHHHTT----CSC----CCCGGGTT-------CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-cCCCH--------HHHHHHHHHHHH----Hhc----cCCchhhh-------HHHHHHHHHHHHHHH
Confidence            7 99999999996 88542        122233222211    111    11222211       134456677888899


Q ss_pred             HHHHHHHHhhcCCCCCCcHHHHHhccCCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHH
Q 009414          288 RIIQEHRTTQTSLQRNSDFVDVLLSLSGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQ  366 (535)
Q Consensus       288 ~~i~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~  366 (535)
                      +.|++++++.     ..|+++.|++...+ ++++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++ 
T Consensus       226 ~~i~~r~~~~-----~~dll~~ll~~~~~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~-  299 (433)
T 3ivy_A          226 KMAEEKAKNP-----ADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP-  299 (433)
T ss_dssp             HHHHHC------------CHHHHHSCC--CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC-
T ss_pred             HHHHHHhcCC-----CCcHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc-
Confidence            9888876543     23999999987543 3699999999999999999999999999999999999999999999974 


Q ss_pred             hhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCC
Q 009414          367 VVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFM  446 (535)
Q Consensus       367 ~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  446 (535)
                                         +|||+|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+
T Consensus       300 -------------------~a~i~E~LRl~p~~~~~--~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~  358 (433)
T 3ivy_A          300 -------------------ETAADEIVRWATPVTAF--QRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFN  358 (433)
T ss_dssp             -------------------TTHHHHHHHHHCSBCEE--EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCC
T ss_pred             -------------------cchhHHHhhhCcchhce--eeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccC
Confidence                               79999999999999986  899999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCCCccccccCCCCceeccC-CCCCCCcchhHHHHHHHHHHHHHhhcce-eeecCCCCCCccccccccccccC
Q 009414          447 PERFVNPEAADMDISLMGSDLRLAPFG-SGRRTCPGKGLGLATVSFWVGTLLHEFK-WVQSDYDPVDLSEVLRLSCEMKN  524 (535)
Q Consensus       447 P~R~l~~~~~~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~  524 (535)
                      |+||.               ..++||| .|+|.|+|++||++|++++++.|+++|+ +++.++.  ++.  .........
T Consensus       359 p~R~~---------------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~--~~~~~~g~~  419 (433)
T 3ivy_A          359 ILRNP---------------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAP--ERL--RSGWLNGIK  419 (433)
T ss_dssp             TTCCS---------------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCC--EEC--CCSSBCCEE
T ss_pred             CCCCC---------------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCC--cee--ccCcccCcc
Confidence            99983               2589999 9999999999999999999999999999 9998632  221  122233346


Q ss_pred             ceeEEEEecc
Q 009414          525 PLTVRVHARR  534 (535)
Q Consensus       525 ~~~v~~~~r~  534 (535)
                      .++|++++|.
T Consensus       420 ~lpv~~~~R~  429 (433)
T 3ivy_A          420 HWQVDYTGRC  429 (433)
T ss_dssp             ECEEESCC--
T ss_pred             eeEEEEeccc
Confidence            8899998875


No 56 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=5.6e-59  Score=460.24  Aligned_cols=377  Identities=15%  Similarity=0.149  Sum_probs=304.1

Q ss_pred             cCCChhHHHHHHHHHhcCc-ceEEEEeCCeeEEEecCHHHHHHHhcC-CCCCCCCchhhhh-hhhcccceeeCcCChhHH
Q 009414           85 MTNLPHHNLAAAAEAYKAK-RVMAFSLGETRVIITCSPDVAKEILNS-SVFADRPVKESAY-SLMFNRAIGFAPYGVYWR  161 (535)
Q Consensus        85 ~~~~~~~~l~~~~~ky~~G-~v~~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~~~~~~~~-~~~~g~~~~~~~~g~~w~  161 (535)
                      +..+++.++.++++++  | ||+++..++. +++|+||+.+++|+++ ..|++++...... ....+.++ +..+|+.|+
T Consensus        36 ~~~dp~~~~~~lr~~~--G~pv~~~~~~~~-~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~-~~~dg~~h~  111 (421)
T 3lxh_A           36 LEQGFHEAWKRVQQPD--TPPLVWTPFTGG-HWIATRGTLIDEIYRSPERFSSRVIWVPREAGEAYDMVP-TKLDPPEHT  111 (421)
T ss_dssp             GGGCHHHHHHHHCCTT--CCSEEEESSTTS-EEEECSHHHHHHHHTCTTTEETTCCSSSHHHHHHCCCTT-TTCCTTTHH
T ss_pred             hhcChhHHHHHHHhcC--CCCeEeccCCCC-eEEEcCHHHHHHHHcChhhccCCcccCCcccccccccCC-ccCCcHHHH
Confidence            3458999999998765  5 8999988764 7899999999999985 4777776332211 11223344 445999999


Q ss_pred             HHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCCchHHHHH
Q 009414          162 TLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSSNTEARRL  240 (535)
Q Consensus       162 ~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~  240 (535)
                      ++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+  ++.+|+...+ ..++.++++. +||.+.+.        ...+
T Consensus       112 ~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--------~~~~  179 (421)
T 3lxh_A          112 PYRKAI-DKGLNLAEIRKLEDQIRTIAVEIIEGFAD--RGHCEFGSEFSTVFPVRVFLA-LAGLPVED--------ATKL  179 (421)
T ss_dssp             HHHHHH-HHHHSHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTTHHHHHHHH-HHTCCGGG--------HHHH
T ss_pred             HHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHHHHHHHHH-HcCCCHHH--------HHHH
Confidence            999999 68999999999999999999999999864  4578875555 6677777765 58866433        3444


Q ss_pred             HHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCC-CCC
Q 009414          241 SRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGP-DRL  319 (535)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l  319 (535)
                      .+....++....            ++ +....++..++.+.+.+++.+.+++++++     ...|+++.|++...+ +++
T Consensus       180 ~~~~~~~~~~~~------------~~-p~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~~~~~~~l  241 (421)
T 3lxh_A          180 GLLANEMTRPSG------------NT-PEEQGRSLEAANKGFFEYVAPIIAARRGG-----SGTDLITRILNVEIDGKPM  241 (421)
T ss_dssp             HHHHHHHHSCCC------------SS-HHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCSHHHHHHTSCBTTBCC
T ss_pred             HHHHHHHhcccc------------CC-CchhHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhhhccCCCC
Confidence            444444432111            11 23335667788889999999999888754     223999999987543 369


Q ss_pred             CHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCC
Q 009414          320 SDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPG  399 (535)
Q Consensus       320 ~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~  399 (535)
                      +++++.+++..+++||+|||+++++|++++|++||++|+++|+|++                  |++|||+|+||++|++
T Consensus       242 ~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~  303 (421)
T 3lxh_A          242 PDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL------------------KLQRGVEELFRRFAVV  303 (421)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH------------------HHHHHHHHHHHHCCCB
T ss_pred             CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhcCcc
Confidence            9999999999999999999999999999999999999999999987                  7899999999999999


Q ss_pred             CcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCC
Q 009414          400 PLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTC  479 (535)
Q Consensus       400 ~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C  479 (535)
                       .+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||               ...++|||.|+|.|
T Consensus       304 -~~--~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~---------------~~~~l~FG~G~r~C  365 (421)
T 3lxh_A          304 -SD--ARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR---------------DVTHSTFAQGPHRC  365 (421)
T ss_dssp             -EE--EEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS---------------CCCCCTTCCGGGSC
T ss_pred             -CC--ceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC---------------CCCCCCCCCcCccC
Confidence             66  8999999999999999999999999999999999999999999994               24699999999999


Q ss_pred             cchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          480 PGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       480 ~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      +|++||++|++++++.|+++| ++++.++.+..+.  .+....+ ..++|+++||+
T Consensus       366 ~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~~~~~--~~~~~~~-~~lpv~~~p~~  418 (421)
T 3lxh_A          366 AGMHLARLEVTVMLQEWLARIPEFRLKDRAVPIYH--SGIVAAV-ENIPLEWEPQR  418 (421)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCCCCEECTTCCCEEE--CSSBCEE-ECCEEECCCC-
T ss_pred             cCHHHHHHHHHHHHHHHHHhCCCcEECCCCCceec--cccccCc-eeeeEEEeccc
Confidence            999999999999999999999 9999876554433  2333333 67999999875


No 57 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=1.8e-58  Score=453.96  Aligned_cols=373  Identities=18%  Similarity=0.255  Sum_probs=305.0

Q ss_pred             ccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCch--h----h-----hh-hh---hcc
Q 009414           84 LMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVK--E----S-----AY-SL---MFN  148 (535)
Q Consensus        84 ~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~--~----~-----~~-~~---~~g  148 (535)
                      .+..+++.++.++ ++|  |||+++++|+.++++|+||+.+++++.+..|++++..  .    .     .. ..   ..+
T Consensus        11 ~~~~~p~~~~~~l-~~y--Gpv~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (404)
T 1z8o_A           11 SFHVDWYRTYAEL-RET--APVTPVRFLGQDAWLVTGYDEAKAALSDLRLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFA   87 (404)
T ss_dssp             GGTSSHHHHHHHH-HHH--CSEEEEEETTEEEEEECSHHHHHHHHHCTTEECCTTCCCTTCCCCCGGGTTCCHHHHHHHS
T ss_pred             ccccCcHHHHHHH-Hhc--CCeeeecCCCceEEEEcCHHHHHHHHcCCCccccccccccccccccccccccccchhhhcc
Confidence            3456899999999 999  9999999999999999999999999987677776543  2    1     11 11   145


Q ss_pred             cceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhccccc
Q 009414          149 RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYA  227 (535)
Q Consensus       149 ~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~  227 (535)
                      .++++. +|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+  ++++|+.+.+ ..+++++++. +||.+.+
T Consensus        88 ~~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~  162 (404)
T 1z8o_A           88 TNMGTS-DPPTHTRLRKLV-SQEFTVRRVEAMRPRVEQITAELLDEVGD--SGVVDIVDRFAHPLPIKVICE-LLGVDEK  162 (404)
T ss_dssp             SSGGGC-CTTHHHHHHHHH-HTTSCHHHHHHTHHHHHHHHHHHHHTSCS--SSEEEHHHHTTTHHHHHHHHH-HTTCCGG
T ss_pred             cccccC-CCcHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCcchHHHHhHHHHHHHHHH-HhCCCHH
Confidence            666544 999999999999 68999999999999999999999999864  5689998655 6899999998 5998764


Q ss_pred             ccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHH
Q 009414          228 LLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFV  307 (535)
Q Consensus       228 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l  307 (535)
                      .   .     ..+.........    .    ..|       .  .++..++.+.+.+++.+.|++++++.    . .|++
T Consensus       163 ~---~-----~~~~~~~~~~~~----~----~~p-------~--~~~~~~~~~~~~~~~~~~i~~r~~~~----~-~dll  212 (404)
T 1z8o_A          163 Y---R-----GEFGRWSSEILV----M----DPE-------R--AEQRGQAAREVVNFILDLVERRRTEP----G-DDLL  212 (404)
T ss_dssp             G---T-----TTHHHHHHHHHC----C----CGG-------G--HHHHHHHHHHHHHHHHHHHHHHHHSC----C-SSHH
T ss_pred             H---H-----HHHHHHHHHHhc----c----CCh-------h--HHHHHHHHHHHHHHHHHHHHHHHhCC----C-CCHH
Confidence            4   1     122222332222    1    001       1  34566777888999999999887642    2 3999


Q ss_pred             HHHhcc-CCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCch
Q 009414          308 DVLLSL-SGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYL  385 (535)
Q Consensus       308 ~~ll~~-~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l  385 (535)
                      +.|++. .++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||
T Consensus       213 ~~ll~~~~~~~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l  274 (404)
T 1z8o_A          213 SALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS------------------AL  274 (404)
T ss_dssp             HHHHHCEETTTEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GH
T ss_pred             HHHHhhhcccCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------hH
Confidence            999986 433 2599999999999999999999999999999999999999999999963                  79


Q ss_pred             hHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCC
Q 009414          386 PAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGS  465 (535)
Q Consensus       386 ~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~  465 (535)
                      +|||+|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||.              
T Consensus       275 ~a~i~E~lRl~p~~~~~--~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~--------------  338 (404)
T 1z8o_A          275 PNAVEEILRYIAPPETT--TRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT--------------  338 (404)
T ss_dssp             HHHHHHHHHHTCSSCCE--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC--------------
T ss_pred             HHHHHHHHHhcCCccCc--ceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC--------------
Confidence            99999999999999966  89999999999999999999999999999999999999999999983              


Q ss_pred             CCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEE
Q 009414          466 DLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRV  530 (535)
Q Consensus       466 ~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  530 (535)
                       ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++. .+.....+.+.++..+++|++
T Consensus       339 -~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~~~l~v~~  402 (404)
T 1z8o_A          339 -RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDA-DDVVWRRSLLLRGIDHLPVRL  402 (404)
T ss_dssp             -TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG-GGCCCCCCSSSCCCSCCEEET
T ss_pred             -CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCC-CcceeccccccCCcceeEEEe
Confidence             2489999999999999999999999999999999 58987631 122223355566778888875


No 58 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=7e-58  Score=453.05  Aligned_cols=374  Identities=18%  Similarity=0.199  Sum_probs=303.0

Q ss_pred             CChhHHHHHHHHHhcCcceEEEEeC-------CeeEEEecCHHHHHHHhcC-CCCCCCCch--hhhhhhh--cccceeeC
Q 009414           87 NLPHHNLAAAAEAYKAKRVMAFSLG-------ETRVIITCSPDVAKEILNS-SVFADRPVK--ESAYSLM--FNRAIGFA  154 (535)
Q Consensus        87 ~~~~~~l~~~~~ky~~G~v~~~~~g-------~~~~vvv~dp~~i~~i~~~-~~~~~~~~~--~~~~~~~--~g~~~~~~  154 (535)
                      .+++.++.+++ +|  ||||+++++       +.++++|+||+.+++|+.+ ..|++++..  ......+  .+.++++.
T Consensus        44 ~~p~~~~~~l~-~~--Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~  120 (435)
T 2wm5_A           44 DVRDGAFATLR-RE--APISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPELAEYFGSMIVL  120 (435)
T ss_dssp             HHHHHHHHHHH-HH--CSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCTTTEECSSCCSSSCCCHHHHHHHHGGGGC
T ss_pred             CChhHHHHHHH-hc--CCeEecccccccccCCCCCeEEEcCHHHHHHHHcCcccccCccccccCccccchhhhccccccC
Confidence            56888999996 79  999999986       6678999999999999986 357777632  1111111  25566555


Q ss_pred             cCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhC-CCceeHHHHH-HHHHHHHHHHHHhcccccccCCC
Q 009414          155 PYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYG-GSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYS  232 (535)
Q Consensus       155 ~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~-~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~  232 (535)
                       +|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+.+ ++.+|+.+.+ ..+++++++.+ ||.+++.    
T Consensus       121 -dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~----  193 (435)
T 2wm5_A          121 -DDPRHQRLRSIV-SRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKAD----  193 (435)
T ss_dssp             -CTTHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG----
T ss_pred             -CcHHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHHH----
Confidence             899999999999 6899999999999999999999999998653 4489999765 79999999999 9987643    


Q ss_pred             CchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhc
Q 009414          233 SNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLS  312 (535)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~  312 (535)
                          ...+.+.........        .|++..     ..++..++.+.+.+++.+.|++++++.    . .|+++.|++
T Consensus       194 ----~~~~~~~~~~~~~~~--------~p~~~~-----~~~~~~~~~~~~~~~~~~~i~~r~~~~----~-~dll~~ll~  251 (435)
T 2wm5_A          194 ----HQRIFHWTNVILGFG--------DPDLAT-----DFDEFMQVSADIGAYATALAEDRRVNH----H-DDLTSSLVE  251 (435)
T ss_dssp             ----HHHHHHHHHHHHHTT--------CTTSCC-----CHHHHHHHHHHHHHHHHHHHHHHHHSC----C-SSHHHHHHH
T ss_pred             ----HHHHHHHHHHHhccC--------Ccchhh-----hHHHHHHHHHHHHHHHHHHHHHHhcCC----C-CCHHHHHHh
Confidence                223444444443321        132211     123556777888999999999887632    2 399999998


Q ss_pred             cCCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHh
Q 009414          313 LSGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKE  391 (535)
Q Consensus       313 ~~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E  391 (535)
                      ...+ .+++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++.                 ||+|||+|
T Consensus       252 ~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~-----------------~l~a~i~E  314 (435)
T 2wm5_A          252 AEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDG-----------------LAPTAVEE  314 (435)
T ss_dssp             CCBTTBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHHH-----------------HHHHHHHH
T ss_pred             hhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChHh-----------------HHHHHHHH
Confidence            7543 35999999999999999999999999999999999999999999999873                 79999999


Q ss_pred             hhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceec
Q 009414          392 VVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAP  471 (535)
Q Consensus       392 tlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~  471 (535)
                      +||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+|+  +             ..++|
T Consensus       315 ~lRl~p~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~--~-------------~~~lp  377 (435)
T 2wm5_A          315 IVRWASPVVYM--RRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN--P-------------NPHLG  377 (435)
T ss_dssp             HHHHHCSBCCE--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC--S-------------CCCCT
T ss_pred             HHhhcCcccCc--ceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC--C-------------CCCCC
Confidence            99999999966  8999999999999999999999999999999999999999999993  1             25899


Q ss_pred             cCC-CCCCCcchhHHHHHHHHHHHHHhhcce-eeecCCCCCCccccccccccccCceeEEE
Q 009414          472 FGS-GRRTCPGKGLGLATVSFWVGTLLHEFK-WVQSDYDPVDLSEVLRLSCEMKNPLTVRV  530 (535)
Q Consensus       472 Fg~-G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  530 (535)
                      ||. |+|.|+|++||++|++++++.||++|+ +++.+  +.++  ......+....++|++
T Consensus       378 FG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~--~~~~--~~~~~~~~~~~lpv~~  434 (435)
T 2wm5_A          378 FGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATE--EPAR--LLSQFIHGIKTLPVTW  434 (435)
T ss_dssp             TCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEECS--CCEE--CCCSSBCCEEECEEEC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccEECC--Cccc--cccccccCccceeEEe
Confidence            999 999999999999999999999999997 99876  2233  2233334446677765


No 59 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=4.4e-59  Score=458.94  Aligned_cols=371  Identities=15%  Similarity=0.169  Sum_probs=297.9

Q ss_pred             CChhHHHHHHHHHhcCcceE-----EEEeCCeeEEEecCHHHHHHHhcC-CCCCCCCchh-hhh--hh---hcccceeeC
Q 009414           87 NLPHHNLAAAAEAYKAKRVM-----AFSLGETRVIITCSPDVAKEILNS-SVFADRPVKE-SAY--SL---MFNRAIGFA  154 (535)
Q Consensus        87 ~~~~~~l~~~~~ky~~G~v~-----~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~~~~~-~~~--~~---~~g~~~~~~  154 (535)
                      .+++.++.+++ +|  |||+     ++++  .++++|+||+.+++|+.+ ..|++++... ...  ..   ..+.++++.
T Consensus        25 ~~p~~~~~~l~-~~--Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~   99 (414)
T 2uuq_A           25 PNPWPMYRALR-DH--DPVHHVVPPQRPE--YDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTPPMVMQ   99 (414)
T ss_dssp             TCCHHHHHHHH-HH--CSEEEECCTTCGG--GCEEEECSHHHHHHHHHCTTTEESTTCSSSCTTHHHHHTCSSSCCGGGC
T ss_pred             cCchHHHHHHH-hc--CCEEcccccccCC--CCEEEEcCHHHHHHHHcCchhccCCCCcccccCcccccccccccccccC
Confidence            57899999985 79  9998     7766  567999999999999986 4577775432 111  11   235666555


Q ss_pred             cCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHHHHHHHHHhcccccccCCCC
Q 009414          155 PYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLR-DILKPASLNNMMCSVFGRKYALLGYSS  233 (535)
Q Consensus       155 ~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~-~~~~~~~~~vi~~~~fG~~~~~l~~~~  233 (535)
                       +|+.|+++|+.+ .+.|+++.++.+.+.+++.++++++.+.+.  +.+|+. +++..+++++++. +||.+++.     
T Consensus       100 -~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--~~vdl~~~~~~~~~~~vi~~-~~G~~~~~-----  169 (414)
T 2uuq_A          100 -DPPVHTEFRKLV-SRGFTPRQVETVEPTVRKFVVERLEKLRAN--GGGDIVTELFKPLPSMVVAH-YLGVPEED-----  169 (414)
T ss_dssp             -CTTHHHHHHHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHT--TEEEHHHHTTTHHHHHHHHH-HTTCCGGG-----
T ss_pred             -CchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhc--CCccHHHHHHHHhHHHHHHH-HhCCCHHH-----
Confidence             999999999999 689999999999999999999999999763  469997 6678999999998 69987643     


Q ss_pred             chHHHHHHHHHHHHHHhcccccccccc-ccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhc
Q 009414          234 NTEARRLSRLVEEGYDLLGKLNFSDHL-PWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLS  312 (535)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~  312 (535)
                         ...+..........       ..+ |..         .+..++.+.+.+++.+.|++++++    .. .|+++.|++
T Consensus       170 ---~~~~~~~~~~~~~~-------~~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~~----~~-~dll~~ll~  225 (414)
T 2uuq_A          170 ---WTQFDGWTQAIVAA-------NAVDGAT---------TGALDAVGSMMAYFTGLIERRRTE----PA-DDAISHLVA  225 (414)
T ss_dssp             ---HHHHHHHHHHHHHH-------HHC--------------CCHHHHHHHHHHHHHHHHHHTTS----CC-SSHHHHHHH
T ss_pred             ---HHHHHHHHHHHHhh-------cccCCch---------hHHHHHHHHHHHHHHHHHHHHHhC----CC-CCHHHHHHh
Confidence               12233333333221       011 210         123345667888888888877653    22 399999998


Q ss_pred             cCC---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHH
Q 009414          313 LSG---PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVV  389 (535)
Q Consensus       313 ~~~---~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i  389 (535)
                      ...   +.+++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+|||
T Consensus       226 ~~~~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i  287 (414)
T 2uuq_A          226 AGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPE------------------GIPDAV  287 (414)
T ss_dssp             TTTTCTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHH
T ss_pred             cccccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHH
Confidence            753   23488999999999999999999999999999999999999999999963                  899999


Q ss_pred             HhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCC-CCCCCCCCCccCCCCCCCccccccCCCCc
Q 009414          390 KEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIY-ADPLKFMPERFVNPEAADMDISLMGSDLR  468 (535)
Q Consensus       390 ~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~  468 (535)
                      +|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++| +||++|+||||.               ..
T Consensus       288 ~E~lRl~p~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~---------------~~  350 (414)
T 2uuq_A          288 EELLRLTSPVQGL--ARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP---------------RN  350 (414)
T ss_dssp             HHHHHHHCSBCCE--EEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC---------------CS
T ss_pred             HHHHHhCCCcCCc--ceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC---------------CC
Confidence            9999999999966  89999999999999999999999999999999999 999999999984               24


Q ss_pred             eeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          469 LAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       469 ~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      ++|||.|+|.|+|++||++|++++++.|+++| ++++.++ +.++  ..+.+.++..+++|++++|+
T Consensus       351 ~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~-~~~~--~~~~~~~~~~~lpv~~~~r~  414 (414)
T 2uuq_A          351 ILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAES-RIVW--SGGSYVRRPLSVPFRVTSSR  414 (414)
T ss_dssp             CCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECGG-GCEE--CCCSSBCCEEECEEEEC---
T ss_pred             CcCCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC-Cccc--cccccccCcceeEEEecCCC
Confidence            89999999999999999999999999999999 6999742 2333  33555677789999999874


No 60 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=4.5e-59  Score=462.46  Aligned_cols=384  Identities=18%  Similarity=0.214  Sum_probs=294.5

Q ss_pred             CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC-CCCCCCCchhhhhhhhcccceeeCcCChhHHHHHH
Q 009414           87 NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS-SVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRR  165 (535)
Q Consensus        87 ~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr  165 (535)
                      .+++.++.++ ++|  |||+++..++  +++|+||+.+++|+++ ..|++++..... ....|.+.++..+|+.|+++|+
T Consensus        53 ~~p~~~~~~l-r~~--gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~f~~~~~~~~~-~~~~~~~~l~~~dg~~h~~~Rr  126 (441)
T 3nc3_A           53 NNPYAYFSQL-REE--DPVHYEESID--SYFISRYHDVRYILQHPDIFTTKSLVERA-EPVMRGPVLAQMHGKEHSAKRR  126 (441)
T ss_dssp             HCGGGTHHHH-HHH--CSEEEETTTT--EEEECCHHHHHHHHHCTTTEECCCTTSCC-CCSCC-------------CCHH
T ss_pred             cChHHHHHHH-Hhc--CCEEEeCCCC--EEEEcCHHHHHHHhcCccccccccccccc-ccccCCCccccCCcHHHHHHHH
Confidence            5788888887 589  9998887766  7999999999999986 347766554332 2234544345559999999999


Q ss_pred             HhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHHHHHHHHHhcccccccCCCCchHHHHHHHHH
Q 009414          166 IAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLR-DILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLV  244 (535)
Q Consensus       166 ~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~-~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~  244 (535)
                      ++ .+.|+++.++.+.+.+.+.++++++.|.+  ++.+|+. ++...+++++++. +||.+...        ...+....
T Consensus       127 ~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--------~~~~~~~~  194 (441)
T 3nc3_A          127 IV-VRSFIGDALDHLSPLIKQNAENLLAPYLE--RGKSDLVNDFGKTFAVCVTMD-MLGLDKRD--------HEKISEWH  194 (441)
T ss_dssp             HH-HHHHHHTHHHHHHHHHHHHHHHHHTTTTT--TTEEECCCCCHHHHHHHHHHH-HTTCCGGG--------HHHHHHHH
T ss_pred             HH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHHHHH-HcCCCHHH--------HHHHHHHH
Confidence            99 68999999999999999999999998864  5578874 5556799999998 58976533        23344444


Q ss_pred             HHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCC-CCCCCHHH
Q 009414          245 EEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSG-PDRLSDHD  323 (535)
Q Consensus       245 ~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~-~~~l~~~~  323 (535)
                      ..+........          . .....+...++.+.+.+++.+.|++++++     ...|+++.|++... ++++++++
T Consensus       195 ~~~~~~~~~~~----------~-~~~~~~~~~~~~~~l~~~~~~~i~~rr~~-----~~~Dll~~Ll~~~~~~~~ls~~e  258 (441)
T 3nc3_A          195 SGVADFITSIS----------Q-SPEARAHSLWCSEQLSQYLMPVIKERRVN-----PGSDLISILCTSEYEGMALSDKD  258 (441)
T ss_dssp             HHHHHHHHCSC----------C-CHHHHHHHHHHHHHHHHHHHHHHHHHTTS-----CCSSHHHHHCC------CCCHHH
T ss_pred             HHHHHhccccc----------C-ChHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHhhccCCCCCHHH
Confidence            44443322110          0 12223456677788899999999887643     22399999998764 34699999


Q ss_pred             HHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCccc
Q 009414          324 IVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLS  403 (535)
Q Consensus       324 i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~  403 (535)
                      +.+++..+++||+|||+++++|++++|++||++|+++++|+                  +|++|||+|+||++|+++.+ 
T Consensus       259 l~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~pp~~~~-  319 (441)
T 3nc3_A          259 ILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR------------------SLVPRAIAETLRYKPPVQLI-  319 (441)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBCEE-
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHhhhcCCcccCc-
Confidence            99999999999999999999999999999999999999986                  48999999999999999986 


Q ss_pred             ccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchh
Q 009414          404 WARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKG  483 (535)
Q Consensus       404 ~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  483 (535)
                       +|.+.+|++++|+.||||+.|.++.+++|+||++|+||++|+|+||+.++..     .......++|||.|+|.|+|++
T Consensus       320 -~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~-----~~~~~~~~l~FG~G~r~C~G~~  393 (441)
T 3nc3_A          320 -PRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKS-----AFSGAARHLAFGSGIHNCVGTA  393 (441)
T ss_dssp             -EEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGG-----TTSSSCSSCTTCCGGGCCTTHH
T ss_pred             -cEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCccccc-----ccCCCCCcccCCCCCccCCCHH
Confidence             8999999999999999999999999999999999999999999999764311     1112567999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEe
Q 009414          484 LGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHA  532 (535)
Q Consensus       484 ~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  532 (535)
                      ||++|++++++.|+++| ++++.++.+ .  ...+...+....++|++++
T Consensus       394 lA~~e~~~~l~~ll~~f~~~~l~~~~~-~--~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          394 FAKNEIEIVANIVLDKMRNIRLEEDFC-Y--AESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCEECTTCC-C--CEECSSBCEESCCEEECC-
T ss_pred             HHHHHHHHHHHHHHHhCcccEECCCCc-c--cccCccccCcceeEEEEec
Confidence            99999999999999999 999987532 2  2334455666888888764


No 61 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=3.1e-58  Score=457.96  Aligned_cols=381  Identities=19%  Similarity=0.217  Sum_probs=298.9

Q ss_pred             hhHHHHHHHHHhcCcceE--EEE-eCCeeEEEecCHHHHHHHhcC-CCCCCCCchhhhhhh--------------hcccc
Q 009414           89 PHHNLAAAAEAYKAKRVM--AFS-LGETRVIITCSPDVAKEILNS-SVFADRPVKESAYSL--------------MFNRA  150 (535)
Q Consensus        89 ~~~~l~~~~~ky~~G~v~--~~~-~g~~~~vvv~dp~~i~~i~~~-~~~~~~~~~~~~~~~--------------~~g~~  150 (535)
                      ++..+.++ ++|  |||+  +++ +|+.++++|++++.+++++++ ..|++++........              ..+.+
T Consensus        47 p~~~~~~l-r~~--gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~  123 (450)
T 3tkt_A           47 LLDRFDAL-RAE--APVAKVVAPDDEHEPFWLVSSFDGVMKASKDNATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVES  123 (450)
T ss_dssp             HHHHHHHH-HHH--CSEEEECCTTCSSCCEEEECSHHHHHHHHHCTTTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCC
T ss_pred             chHHHHHH-Hhc--CCeecccccCCCCCCEEEEecHHHHHHHHhCcccccCCCccccccccccccccccccccccccccC
Confidence            78888888 678  9999  888 788899999999999999986 557776543221100              12234


Q ss_pred             eeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhccccccc
Q 009414          151 IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALL  229 (535)
Q Consensus       151 ~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l  229 (535)
                      + +..+|+.|+++|+++ .+.|+++.++.+.+.+++.++++++.+.+. ++++|+.+.+ ..+++++|+.+ ||.+.+. 
T Consensus       124 l-~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~-  198 (450)
T 3tkt_A          124 L-VQMDAPKHPKLRRLT-QDWFMPKNLARLDGEIRKIANEAIDRMLGA-GEEGDFMALVAAPYPLHVVMQI-LGVPPED-  198 (450)
T ss_dssp             G-GGCCTTHHHHHHHHH-HTTTSHHHHGGGHHHHHHHHHHHHHHHHHT-CSEEEHHHHTTTHHHHHHHHHH-TTCCGGG-
T ss_pred             c-ccCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEeeHHHHHHHHHHHHHHHH-cCCChhH-
Confidence            4 445999999999999 689999999999999999999999999763 6789988887 69999999985 8965432 


Q ss_pred             CCCCchHHHHHHHHHHHHHHhccccccccccccccccc-hhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHH
Q 009414          230 GYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFD-LQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVD  308 (535)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~  308 (535)
                             ...+.+....+.....    ....++..++. .....++..++.+.+.+++.+.+++++++.     ..|+++
T Consensus       199 -------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~dll~  262 (450)
T 3tkt_A          199 -------EPKMLFLTQQMFGGQD----EDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP-----TDDVAT  262 (450)
T ss_dssp             -------HHHHHHHHHTTSCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHSC-----CSSHHH
T ss_pred             -------HHHHHHHHHHHhcccc----chhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCCHHH
Confidence                   3334333333322111    11222221111 123445667788889999999999887643     239999


Q ss_pred             HHhccCCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhH
Q 009414          309 VLLSLSGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPA  387 (535)
Q Consensus       309 ~ll~~~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a  387 (535)
                      .|++...+ ++++++++.+++..+++||+|||+++++|++++|++||++|++||+|++                  |++|
T Consensus       263 ~ll~~~~~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a  324 (450)
T 3tkt_A          263 VIANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN------------------LLPG  324 (450)
T ss_dssp             HHHTCEETTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHH
T ss_pred             HHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHH------------------HHHH
Confidence            99987543 3599999999999999999999999999999999999999999999974                  7999


Q ss_pred             HHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCC
Q 009414          388 VVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDL  467 (535)
Q Consensus       388 ~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~  467 (535)
                      ||+|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+|+.               .
T Consensus       325 ~i~E~LRl~pp~~~~--~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~---------------~  387 (450)
T 3tkt_A          325 IVEEAIRWTTPVQHF--MRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA---------------N  387 (450)
T ss_dssp             HHHHHHHHHCSBCEE--EEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT---------------T
T ss_pred             HHHHHHHhCCCccCc--ceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC---------------C
Confidence            999999999999966  89999999999999999999999999999999999999999999942               2


Q ss_pred             ceeccCCCCCCCcchhHHHHHHHHHHHHHhhcce-eeecCCCCCCccccccccccccCceeEEEEe
Q 009414          468 RLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFK-WVQSDYDPVDLSEVLRLSCEMKNPLTVRVHA  532 (535)
Q Consensus       468 ~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  532 (535)
                      .++|||.|+|.|+|++||++|++++++.|+++|+ +++.+ ++ ++.  .....+....++|++++
T Consensus       388 ~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~-~~-~~~--~~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          388 RHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAG-EP-KRV--NSTFVGGFKSLPMRWKA  449 (450)
T ss_dssp             CSSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESS-CC-EEC--CCSSBCCEEECEEEEEE
T ss_pred             CCCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCC-Cc-ccc--cCcccCCcccceEEEec
Confidence            5899999999999999999999999999999998 56653 22 222  22223344677888765


No 62 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=1.2e-58  Score=454.92  Aligned_cols=370  Identities=15%  Similarity=0.187  Sum_probs=296.1

Q ss_pred             ccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC-CCCCCCCchhhhh-hhhcccceeeCcCChhHH
Q 009414           84 LMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS-SVFADRPVKESAY-SLMFNRAIGFAPYGVYWR  161 (535)
Q Consensus        84 ~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~~~~~~~~-~~~~g~~~~~~~~g~~w~  161 (535)
                      .+..+++.++.+++++   |||+++..|+. .++|+||+.+++++++ ..|++++...... ....+.++ +..+|+.|+
T Consensus        21 ~~~~~p~~~~~~l~~~---Gpv~~~~~~~~-~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~-~~~~g~~h~   95 (396)
T 3oft_A           21 GVEQDYFAAWKTLLDG---PGLVWSTANGG-HWIAARGDVVRELWGDAERLSSQCLAVTPGLGKVMQFIP-LQQDGAEHK   95 (396)
T ss_dssp             TTTTCHHHHHHGGGGS---CSEEEECSTTS-EEEECSHHHHHHHHHCTTTEESTTCCSSTTHHHHHCCTT-TTCCHHHHH
T ss_pred             hhhcChHHHHHHHHhc---CCeeeecCCCC-EEEEcCHHHHHHHHcCcccccCCcccCCCccccccccCc-cccCCcHHH
Confidence            3456899999999876   79999998754 6889999999999985 4777766322111 11112333 455999999


Q ss_pred             HHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCCchHHHHH
Q 009414          162 TLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSSNTEARRL  240 (535)
Q Consensus       162 ~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~  240 (535)
                      ++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+  ++.+|+...+ ..++.++++. +||.+...        ...+
T Consensus        96 ~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--------~~~~  163 (396)
T 3oft_A           96 AFRTPV-MKGLASRFVVALEPKVQAVARKLMESLRP--RGSCDFVSDFAEILPLNIFLT-LIDVPLED--------RPRL  163 (396)
T ss_dssp             HHHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHGG--GSEEEHHHHTTTTHHHHHHHH-HTTCCGGG--------HHHH
T ss_pred             HHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHHH--------HHHH
Confidence            999999 68999999999999999999999999975  3468886655 5566776665 68865432        3344


Q ss_pred             HHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCC-CCC
Q 009414          241 SRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGP-DRL  319 (535)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l  319 (535)
                      ...........         .          .+...++.+.+.+++.+.|++++++.     ..|+++.|++...+ .++
T Consensus       164 ~~~~~~~~~~~---------~----------~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~d~l~~ll~~~~~~~~l  219 (396)
T 3oft_A          164 RQLGVQLTRPD---------G----------SMTVEQLKQAADDYLWPFIEKRMAQP-----GDDLFSRILSEPVGGRPW  219 (396)
T ss_dssp             HHHHHHHHSCC---------S----------SCCHHHHHHHHHHHHHHHHHHHHHSC-----CSSHHHHHHTSCBTTBCC
T ss_pred             HHHHHHHhCCC---------C----------HHHHHHHHHHHHHHHHHHHHHHHhCC-----CCCHHHHHHHhhccCCCC
Confidence            44443332210         0          11334566788889999999887752     23999999987543 369


Q ss_pred             CHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCC
Q 009414          320 SDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPG  399 (535)
Q Consensus       320 ~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~  399 (535)
                      +++++.+++..+++||+|||+++++|++++|++||++|+++|+|++                  |++|||+|+||++|++
T Consensus       220 ~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~  281 (396)
T 3oft_A          220 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD------------------LIPAAADELMRRYPTV  281 (396)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHCCCB
T ss_pred             CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHHHHHhcCcc
Confidence            9999999999999999999999999999999999999999999976                  7899999999999999


Q ss_pred             CcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCC
Q 009414          400 PLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTC  479 (535)
Q Consensus       400 ~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C  479 (535)
                       .+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||+.             +..++|||.|+|.|
T Consensus       282 -~~--~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~-------------~~~~~~FG~G~r~C  345 (396)
T 3oft_A          282 -AV--SRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA-------------PIRHTTMGVGAHRC  345 (396)
T ss_dssp             -EE--EEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC-------------GGGSSTTCCGGGCC
T ss_pred             -cC--ceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC-------------CCCcccCCCCCccC
Confidence             66  899999999999999999999999999999999999999999999963             24699999999999


Q ss_pred             cchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEE
Q 009414          480 PGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVH  531 (535)
Q Consensus       480 ~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  531 (535)
                      +|++||++|++++++.|+++| ++++.++++..+..  +.. +....++|++.
T Consensus       346 ~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~~~~~~--~~~-~~~~~lpv~~~  395 (396)
T 3oft_A          346 VGAGLARMEVIVFLREWLGGMPEFALAPDKAVTMKG--GNV-GACTALPLVWR  395 (396)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHSCCEEECSSSCCEEEC--SSB-CEEEECEEEEC
T ss_pred             cCHHHHHHHHHHHHHHHHHhCCCceECCCCCceecc--ccc-cCcccceEEeC
Confidence            999999999999999999999 99998765544432  222 23345677653


No 63 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=3.7e-58  Score=451.80  Aligned_cols=369  Identities=16%  Similarity=0.194  Sum_probs=298.0

Q ss_pred             CChhHHHHHHHHHhcCcceEEEEeCC--eeEEEecCHHHHHHHhcC-CCCCCCCchhhhhh--hh--c-ccceeeCcCCh
Q 009414           87 NLPHHNLAAAAEAYKAKRVMAFSLGE--TRVIITCSPDVAKEILNS-SVFADRPVKESAYS--LM--F-NRAIGFAPYGV  158 (535)
Q Consensus        87 ~~~~~~l~~~~~ky~~G~v~~~~~g~--~~~vvv~dp~~i~~i~~~-~~~~~~~~~~~~~~--~~--~-g~~~~~~~~g~  158 (535)
                      .+++..+.++++ |  |||++++..|  .++++|++|+.+++++++ ..|++++.......  ..  . +.++ +..+|+
T Consensus        37 ~dp~~~~~~lr~-~--gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~l-~~~dg~  112 (415)
T 3mgx_A           37 LERHARWRELAA-E--DAMVWSDPGSSPSGFWSVFSHRACAAVLAPSAPLTSEYGMMIGFDRDHPDNSGGRMM-VVSEHE  112 (415)
T ss_dssp             TTHHHHHHHHHH-H--TCCEEECSSSSSSCEEEECSHHHHHHHSCTTSSEECTTCSSTTCCSSSCCTTTTTSG-GGCCHH
T ss_pred             CChhHHHHHHHh-c--CCEeeccCCCCcCCEEEEecHHHHHHHHhChhhhcCCccccccccccccccccCCCc-cccCcH
Confidence            589999999987 8  9999887344  788999999999999986 45777654322110  01  1 3334 445999


Q ss_pred             hHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCCchHH
Q 009414          159 YWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSSNTEA  237 (535)
Q Consensus       159 ~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~~~~~  237 (535)
                      .|+++|+++ .+.|+++.++.+.+.+.+.++++++.+.+  ++.+|+.+++ ..+++++++. +||.+.+        +.
T Consensus       113 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~--------~~  180 (415)
T 3mgx_A          113 QHRKLRKLV-GPLLSRAAARKLAERVRIEVGDVLGRVLD--GEVCDAATAIGPRIPAAVVCE-ILGVPAE--------DE  180 (415)
T ss_dssp             HHHHHHHHH-GGGSSHHHHHHSHHHHHHHHHHHTTTSSS--SSCEESTTTTTTHHHHHHHHH-HHTCCGG--------GH
T ss_pred             HHHHHHHHh-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCcchHHHHHHHHHHHHHHH-HcCCCHH--------HH
Confidence            999999999 68999999999999999999999998865  3479999887 6799999998 5886532        23


Q ss_pred             HHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCCC
Q 009414          238 RRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD  317 (535)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~  317 (535)
                      ..+.+..+.+.....    ....|       .    ...++.+.+.+++.+.|++++++.     ..|+++.|++..   
T Consensus       181 ~~~~~~~~~~~~~~~----~~~~~-------~----~~~~~~~~l~~~~~~~i~~rr~~~-----~~dll~~ll~~~---  237 (415)
T 3mgx_A          181 DMLIDLTNHAFGGED----ELFDG-------M----TPRQAHTEILVYFDELITARRKEP-----GDDLVSTLVTDD---  237 (415)
T ss_dssp             HHHHHHHHHHTSCCC--------C-------C----CHHHHHHHHHHHHHHHHHHHHHSC-----CSSHHHHHHHCT---
T ss_pred             HHHHHHHHHHHcccC----cccch-------H----HHHHHHHHHHHHHHHHHHHHHhCC-----CCCHHHHHHhCC---
Confidence            344444444332111    11111       1    112566788889999999887652     239999999865   


Q ss_pred             CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCC
Q 009414          318 RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHP  397 (535)
Q Consensus       318 ~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~  397 (535)
                      +++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  ||++|||+|+||++|
T Consensus       238 ~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~p  299 (415)
T 3mgx_A          238 DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS------------------ADVDTVVEEVLRWTS  299 (415)
T ss_dssp             TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS------------------SCHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHHHHHHhcC
Confidence            68999999999999999999999999999999999999999999996                  799999999999999


Q ss_pred             CCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCC
Q 009414          398 PGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRR  477 (535)
Q Consensus       398 ~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r  477 (535)
                      +++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||.               ..++|||.|+|
T Consensus       300 p~~~~--~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~---------------~~~l~FG~G~r  362 (415)
T 3mgx_A          300 PAMHV--LRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP---------------NRHITFGHGMH  362 (415)
T ss_dssp             CBCEE--EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS---------------CCCCTTCCGGG
T ss_pred             ccccc--ceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC---------------CCCCCCCCCCc
Confidence            99976  89999999999999999999999999999999999999999999972               25899999999


Q ss_pred             CCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEec
Q 009414          478 TCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHAR  533 (535)
Q Consensus       478 ~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  533 (535)
                      .|+|++||++|++++++.|+++| ++++.++  ..+  ..+...+....++|++++|
T Consensus       363 ~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~--~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          363 HCLGSALARIELSVVLRVLAERVSRVDLERE--PAW--LRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHEEEEEECSC--CEE--CSCSSBCCEEECEEEEEEC
T ss_pred             cCcCHHHHHHHHHHHHHHHHHhCCCCccCCC--ccc--ccCCcccCceeeeEEEecC
Confidence            99999999999999999999999 8998752  222  2233344557889999987


No 64 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=1.2e-57  Score=450.07  Aligned_cols=352  Identities=16%  Similarity=0.169  Sum_probs=291.6

Q ss_pred             ccCCChhHHHHHHHHHhcCcceEEEEeC-CeeEEEecCHHHHHHHhcCCCCCCCCch---hhhhhh-----hcccceeeC
Q 009414           84 LMTNLPHHNLAAAAEAYKAKRVMAFSLG-ETRVIITCSPDVAKEILNSSVFADRPVK---ESAYSL-----MFNRAIGFA  154 (535)
Q Consensus        84 ~~~~~~~~~l~~~~~ky~~G~v~~~~~g-~~~~vvv~dp~~i~~i~~~~~~~~~~~~---~~~~~~-----~~g~~~~~~  154 (535)
                      .+..+++..+.+++++   ||||+++++ |.++++|+||+.+++|+++..|++++..   ......     ..+.++++ 
T Consensus        26 ~~~~dp~~~~~~l~~~---Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~-  101 (417)
T 3tyw_A           26 GCPFAAPAEYAALRTD---DPVARVTLPTRREAWVVTRYDDVRELLSDPRVSADIRRPGFPALGEGEQEAGARFRPFIR-  101 (417)
T ss_dssp             SSTTSCCTHHHHHHHT---CTEEEEECTTSCEEEEECCHHHHHHHHHCTTEECCSSSTTCCCSSTTTSTTSSSCCCGGG-
T ss_pred             ccccCchHHHHHHHhh---CCeeeeecCCCCCeEEEcCHHHHHHHHcCCCcccCCccccccccccccccccccccchhh-
Confidence            3457899999999865   899999997 5889999999999999987677765322   111111     13445544 


Q ss_pred             cCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCC
Q 009414          155 PYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSS  233 (535)
Q Consensus       155 ~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~  233 (535)
                      .+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+ .++++|+.+.+ ..++.++++.+ ||.+++.   . 
T Consensus       102 ~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~---~-  174 (417)
T 3tyw_A          102 TDAPEHTRYRRML-LPAFTVRRVRAMRPAVQARVDEILDGMLA-AGGPVDLVSAYANAVSTSVICEL-LGIPRHD---L-  174 (417)
T ss_dssp             CCHHHHHHHHHHH-GGGGCHHHHHHTHHHHHHHHHHHHHHHHH-HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTT---T-
T ss_pred             cCCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh-hCCCcchHHHHHHHHHHHHHHHH-hCCCHHH---H-
Confidence            4899999999999 68999999999999999999999999987 45679999987 58899999987 9987654   1 


Q ss_pred             chHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhcc
Q 009414          234 NTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSL  313 (535)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~  313 (535)
                       +....   ........         .+.         .++..++.+.+.+++.+.|++++++.    . .|+++.+++.
T Consensus       175 -~~~~~---~~~~~~~~---------~~~---------~~~~~~~~~~l~~~~~~~i~~r~~~~----~-~d~l~~ll~~  227 (417)
T 3tyw_A          175 -EFFRD---VTRISGSR---------NST---------AEQVSEALGGLFGLLGGLVAERREEP----R-DDLISKLVTD  227 (417)
T ss_dssp             -THHHH---HHHHHHSS---------SSC---------TTHHHHHHHHHHHHHHHHHHHHHSSC----C-SSHHHHHHHH
T ss_pred             -HHHHH---HHHHHhcc---------cCC---------HHHHHHHHHHHHHHHHHHHHHHhhCC----C-CCHHHHHHHh
Confidence             12222   22222211         010         12455667788889999998877532    2 3999999987


Q ss_pred             CCC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhh
Q 009414          314 SGP-DRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEV  392 (535)
Q Consensus       314 ~~~-~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~Et  392 (535)
                      ..+ ++++++++.+++..+++||+|||+++++|++++|++||++|++||+|++                  ||+|||+|+
T Consensus       228 ~~~~~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~  289 (417)
T 3tyw_A          228 HLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD------------------LMPAAVDEL  289 (417)
T ss_dssp             TTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG------------------GHHHHHHHH
T ss_pred             cccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------HHHHHHHHH
Confidence            644 3699999999999999999999999999999999999999999999965                  799999999


Q ss_pred             hcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceecc
Q 009414          393 VRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPF  472 (535)
Q Consensus       393 lRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~F  472 (535)
                      ||++|+++... +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||.               ..++||
T Consensus       290 lRl~p~~~~~~-~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------------~~~l~F  353 (417)
T 3tyw_A          290 LRVLSVADSIP-LRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD---------------NHHVAF  353 (417)
T ss_dssp             HHHHCSCTTCC-EEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC---------------CCCCTT
T ss_pred             HHhccccccCc-eeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC---------------CCCCCC
Confidence            99999999732 79999999999999999999999999999999999999999999993               258999


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCC
Q 009414          473 GSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDY  507 (535)
Q Consensus       473 g~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~  507 (535)
                      |.|+|.|+|++||++|++++++.|+++| ++++.++
T Consensus       354 G~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~  389 (417)
T 3tyw_A          354 GYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGE  389 (417)
T ss_dssp             CCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred             CCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence            9999999999999999999999999999 9999753


No 65 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=4.9e-58  Score=449.41  Aligned_cols=368  Identities=17%  Similarity=0.184  Sum_probs=292.2

Q ss_pred             cCCChhHHHHHHHHHhcCcceEEEEe-CCeeEEEecCHHHHHHHhcCCCCC-C-CCch--hhhh----hhhcccceeeCc
Q 009414           85 MTNLPHHNLAAAAEAYKAKRVMAFSL-GETRVIITCSPDVAKEILNSSVFA-D-RPVK--ESAY----SLMFNRAIGFAP  155 (535)
Q Consensus        85 ~~~~~~~~l~~~~~ky~~G~v~~~~~-g~~~~vvv~dp~~i~~i~~~~~~~-~-~~~~--~~~~----~~~~g~~~~~~~  155 (535)
                      +..+++..+.+| ++|  |||+++++ |+.++++|+||+.+++++.+..|+ + ++..  ....    ....+.++++. 
T Consensus        14 ~~~~p~~~~~~l-~~y--Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-   89 (396)
T 1n40_A           14 RGDRIPDAVAEL-RTR--EPIRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPEVVNNMGNI-   89 (396)
T ss_dssp             CSSSCCHHHHHH-HHH--CSEEEEECTTSCEEEEECSHHHHHHHHTCTTEESGGGGSTTCCCSSCCSSCGGGGGHHHHH-
T ss_pred             cccCccHHHHHH-HHh--CCeeEeecCCCceEEEEecHHHHHHHHhCCCcccccCccccccccccccCCchhhhhhhhH-
Confidence            456899999999 999  99999998 889999999999999999876666 4 4321  1110    11124455433 


Q ss_pred             CChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCCc
Q 009414          156 YGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSSN  234 (535)
Q Consensus       156 ~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~~  234 (535)
                         .|+++|+.+ .+.|+++ ++.+.+.+.+.++++++.+.+. ++++|+.+.+ ..+++++++. +||.+++.      
T Consensus        90 ---~h~~~R~~~-~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------  156 (396)
T 1n40_A           90 ---ADAGLRKAV-MKAITPK-APGLEQFLRDTANSLLDNLITE-GAPADLRNDFADPLATALHCK-VLGIPQED------  156 (396)
T ss_dssp             ---HHTTCHHHH-HHHTSSC-STTHHHHHHHHHHHHHHHHHHH-CSCEETTTTTHHHHHHHHHHH-HHTCCGGG------
T ss_pred             ---HHHHHHHHH-HHhhChH-HHHhHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHhHHHHHHH-HhCCChhh------
Confidence               999999999 6789999 9999999999999999999763 5689998665 5899999998 89987543      


Q ss_pred             hHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccC
Q 009414          235 TEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLS  314 (535)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~  314 (535)
                        ...+.+..........      ..|       .   ++..++.+.+ +++.+.|+      +.++.+ |+++.|++..
T Consensus       157 --~~~~~~~~~~~~~~~~------~~p-------~---~~~~~~~~~~-~~~~~~i~------~~~~~~-dll~~ll~~~  210 (396)
T 1n40_A          157 --GPKLFRSLSIAFMSSA------DPI-------P---AAKINWDRDI-EYMAGILE------NPNITT-GLMGELSRLR  210 (396)
T ss_dssp             --HHHHHHTHHHHTBCCS------SCC-------H---HHHHHHHHHH-HHHHHHHH------CTTCCS-HHHHHHHHHH
T ss_pred             --HHHHHHHHHHHhcccc------CCC-------H---HHHHHHHHHH-HHHHHHHh------CCCCCC-CHHHHHHHhh
Confidence              2234433333322110      011       1   2444555666 77777766      121224 9999999764


Q ss_pred             ---CCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHh
Q 009414          315 ---GPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKE  391 (535)
Q Consensus       315 ---~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E  391 (535)
                         ++.+++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++                  ||+|||+|
T Consensus       211 ~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E  272 (396)
T 1n40_A          211 KDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------------LIPAGVEE  272 (396)
T ss_dssp             TSGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHH
T ss_pred             cccccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH------------------HHHHHHHH
Confidence               234699999999999999999999999999999999999999999999964                  79999999


Q ss_pred             hhcCCCCCC-cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCcee
Q 009414          392 VVRLHPPGP-LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLA  470 (535)
Q Consensus       392 tlRl~~~~~-~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~  470 (535)
                      +||++|+++ .+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|+||.+              ..++
T Consensus       273 ~lRl~p~~~~~~--~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~--------------~~~~  336 (396)
T 1n40_A          273 LLRINLSFADGL--PRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP--------------TSHL  336 (396)
T ss_dssp             HHHTCCCBCSCE--EEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST--------------TCSS
T ss_pred             HHhhCCCccccc--ceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC--------------CCCC
Confidence            999999999 55  899999999999999999999999999999999999999999999962              2589


Q ss_pred             ccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEE
Q 009414          471 PFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRV  530 (535)
Q Consensus       471 ~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  530 (535)
                      |||.|+|.|+|++||++|++++++.|+++| ++++.++. .++....+...+....++|++
T Consensus       337 ~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          337 AFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPI-DQLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             TTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG-GGCCBCCSBSBCCBSCCEEEC
T ss_pred             CCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCc-cccccccccccCCcceeeeeC
Confidence            999999999999999999999999999999 59987641 222233445556667887763


No 66 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=6.4e-58  Score=453.01  Aligned_cols=380  Identities=21%  Similarity=0.243  Sum_probs=299.1

Q ss_pred             ccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCC-CCCCchhhhhh---------hhcccceee
Q 009414           84 LMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVF-ADRPVKESAYS---------LMFNRAIGF  153 (535)
Q Consensus        84 ~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~-~~~~~~~~~~~---------~~~g~~~~~  153 (535)
                      .+..+++.++.++ ++|  |||+++++|   +++|+||+.+++|+++..+ ++++.......         ...+.++++
T Consensus        26 ~~~~~p~~~~~~l-r~~--gpv~~~~~g---~~vv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   99 (418)
T 3r9b_A           26 ATRADPYPIYDRI-RRG--GPLALPEAN---LAVFSSFSDCDDVLRHPSSCSDRTKSTIFQRQLAAETQPRPQGPASFLF   99 (418)
T ss_dssp             GGTTCCHHHHHHH-HHH--CCEEEGGGT---EEEECSHHHHHHHHHCTTEECCGGGCHHHHHHHC---------CCCGGG
T ss_pred             hhccCchHHHHHH-Hhc--CCEEECCCC---eEEEecHHHHHHHHcCcccccCcccccccccccccccccccccccchhh
Confidence            4457899999998 588  999988776   7999999999999986544 33332221111         122345544


Q ss_pred             CcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHH-HHHHHHHHHHHHHhcccccccCCC
Q 009414          154 APYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDI-LKPASLNNMMCSVFGRKYALLGYS  232 (535)
Q Consensus       154 ~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~-~~~~~~~vi~~~~fG~~~~~l~~~  232 (535)
                       .+|+.|+++|+.+ .+.|+++.++.+.+.+++.++++++ +.+  ++.+|+... ...+++++++. +||.+.+.    
T Consensus       100 -~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~-l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----  169 (418)
T 3r9b_A          100 -LDPPDHTRLRGLV-SKAFAPRVIKRLEPEITALVDQLLD-AVD--GPEFNLIDNLAYPLPVAVICR-LLGVPIED----  169 (418)
T ss_dssp             -CCTTHHHHHHHHH-HGGGSHHHHGGGHHHHHHHHHHHHH-TCC--SSEEEHHHHTTTHHHHHHHHH-HHTCCGGG----
T ss_pred             -cCCchHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHh-hhc--cCCeehHHHHhCcCCHHHHHH-HcCCCHHH----
Confidence             4899999999999 6899999999999999999999999 743  458997654 56899999999 89987643    


Q ss_pred             CchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhc
Q 009414          233 SNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLS  312 (535)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~  312 (535)
                          ...+..............      +.+.++ +....++..++.+.+.+++.+.+++++++.     ..|+++.|++
T Consensus       170 ----~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~-----~~d~l~~ll~  233 (418)
T 3r9b_A          170 ----EPKFSRASALLAAALDPF------LALTGE-TSDLFDEQMKAGMWLRDYLRALIDERRRTP-----GEDLMSGLVA  233 (418)
T ss_dssp             ----HHHHHHHHHHHHHTTSCH------HHHHSS-CCTTHHHHHHHHHHHHHHHHHHHHHTTTSC-----CSSHHHHHHH
T ss_pred             ----HHHHHHHHHHHHhhcCcc------cccccc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CccHHHHHHH
Confidence                223333333332221111      111111 122345667778888899999988776432     2399999997


Q ss_pred             cCC-CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHh
Q 009414          313 LSG-PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKE  391 (535)
Q Consensus       313 ~~~-~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E  391 (535)
                      ..+ +++++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |++|||+|
T Consensus       234 ~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E  295 (418)
T 3r9b_A          234 VEESGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS------------------RASAVIEE  295 (418)
T ss_dssp             HHHHSSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG------------------GHHHHHHH
T ss_pred             hhhccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------hHHHHHHH
Confidence            643 34699999999999999999999999999999999999999999999975                  78999999


Q ss_pred             hhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceec
Q 009414          392 VVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAP  471 (535)
Q Consensus       392 tlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~  471 (535)
                      +||++|+++..  .|.+.+|++++|+.||||+.|.++.+++|+||++|+||++|+|+|.               ...++|
T Consensus       296 ~lRl~p~~~~~--~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~---------------~~~~~~  358 (418)
T 3r9b_A          296 TMRYDPPVQLV--SRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA---------------QIRHLG  358 (418)
T ss_dssp             HHHHSCSBCCE--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS---------------CCCCCT
T ss_pred             HHHhCCccccc--eeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC---------------CCCCcC
Confidence            99999999987  7999999999999999999999999999999999999999999992               135899


Q ss_pred             cCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          472 FGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       472 Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      ||.|+|.|+|++||++|++++++.|+++| ++++.++  .  ....+.+.++...++|++.+|.
T Consensus       359 FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~--~~~~~~~~~~~~~lpv~~~~r~  418 (418)
T 3r9b_A          359 FGKGAHFCLGAPLARLEATVALPALAARFPEARLSGE--P--EYKRNLTLRGMSTLSIAVHHHH  418 (418)
T ss_dssp             TCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC--C--EECSCSSBCCEEECEEEC----
T ss_pred             CCCcCccCccHHHHHHHHHHHHHHHHHhCccceeCCC--C--ccccCCcccCcceeEEEecCCC
Confidence            99999999999999999999999999999 8998863  2  2344566677789999998874


No 67 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=2.8e-58  Score=451.71  Aligned_cols=362  Identities=16%  Similarity=0.175  Sum_probs=285.6

Q ss_pred             HHHHHHHhcCcceEEEEeC-Ce---eEEEecCHHHHHHHh-cCCCCCCCCc------hh---hhhhhhcccceeeCcCCh
Q 009414           93 LAAAAEAYKAKRVMAFSLG-ET---RVIITCSPDVAKEIL-NSSVFADRPV------KE---SAYSLMFNRAIGFAPYGV  158 (535)
Q Consensus        93 l~~~~~ky~~G~v~~~~~g-~~---~~vvv~dp~~i~~i~-~~~~~~~~~~------~~---~~~~~~~g~~~~~~~~g~  158 (535)
                      +.+|+ ++  |||++++++ +.   ++++|+||+.+++++ ++..|++++.      ..   .......+.++++ .+|+
T Consensus        19 ~~~l~-~~--Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~   94 (398)
T 1lfk_A           19 ADELL-AA--GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQQFSTRRRWDPRDEIGGKGIFRPRELVGNLMD-YDPP   94 (398)
T ss_dssp             CHHHH-TS--CSEEEEC------CCCEEEECSHHHHHHHHHCTTTEEECTTCCC-------------CCTTCGGG-CCTT
T ss_pred             hHHHH-hc--CCccccccCCCCcccceEEEecHHHHHHHHhhCcccccccccccccccCCcccccccccccCccc-cCCH
Confidence            33454 44  899999875 45   789999999999999 6666776654      11   1111223456655 4899


Q ss_pred             hHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHH-HHHHHHHHHHhcccccccCCCCchHH
Q 009414          159 YWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKP-ASLNNMMCSVFGRKYALLGYSSNTEA  237 (535)
Q Consensus       159 ~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~-~~~~vi~~~~fG~~~~~l~~~~~~~~  237 (535)
                      .|+++|+.+ .+.|+++.++.+.+.+++.++++++.+.+ .++++|+.+++.. ++.++++. +||.+++.        .
T Consensus        95 ~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--------~  163 (398)
T 1lfk_A           95 EHTRLRRKL-TPGFTLRKMQRMAPYIEQIVNDRLDEMER-AGSPADLIAFVADKVPGAVLCE-LVGVPRDD--------R  163 (398)
T ss_dssp             HHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG--------H
T ss_pred             HHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH--------H
Confidence            999999999 68899999999999999999999999975 3567999999887 88999987 69987543        2


Q ss_pred             HHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCCC
Q 009414          238 RRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPD  317 (535)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~  317 (535)
                      ..+.......+.         . +        ...++..++.+.+.+++.+.|++++++.    . .|+++.|++.. ++
T Consensus       164 ~~~~~~~~~~~~---------~-~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~-~dll~~ll~~~-~~  219 (398)
T 1lfk_A          164 DMFMKLCHGHLD---------A-S--------LSQKRRAALGDKFSRYLLAMIARERKEP----G-EGMIGAVVAEY-GD  219 (398)
T ss_dssp             HHHHHHHHHTTC---------T-T--------SCHHHHHHHHHHHHHHHHHHHHHHHHSC----C-SSHHHHHHHHH-GG
T ss_pred             HHHHHHHHHHHh---------c-c--------cchHHHHHHHHHHHHHHHHHHHHHHhCC----C-CCHHHHHHHhc-CC
Confidence            233333322211         0 0        0114456677888999999999887642    2 39999999865 44


Q ss_pred             CCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCC
Q 009414          318 RLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHP  397 (535)
Q Consensus       318 ~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~  397 (535)
                      +++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++                  |++|||+|+||++|
T Consensus       220 ~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p  281 (398)
T 1lfk_A          220 DATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ------------------SAQRAVDELIRYLT  281 (398)
T ss_dssp             GSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH------------------HHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHhCc
Confidence            689999999999999999999999999999999999999999999986                  68999999999999


Q ss_pred             CCC-cccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCC
Q 009414          398 PGP-LLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGR  476 (535)
Q Consensus       398 ~~~-~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~  476 (535)
                      +++ ..  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||.               ..++|||.|+
T Consensus       282 ~~~~~~--~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------------~~~l~FG~G~  344 (398)
T 1lfk_A          282 VPYSPT--PRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP---------------IPHVAFGHGV  344 (398)
T ss_dssp             CBSCCS--CEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC---------------CCCCTTCCST
T ss_pred             cccccc--ceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC---------------CCCCCCCCCC
Confidence            999 45  89999999999999999999999999999999999999999999983               2489999999


Q ss_pred             CCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEE
Q 009414          477 RTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVR  529 (535)
Q Consensus       477 r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  529 (535)
                      |.|+|++||++|++++++.|+++| ++++.+. +.++....+...+....++|+
T Consensus       345 r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-~~~~~~~~~~~~~~~~~lpv~  397 (398)
T 1lfk_A          345 HHCLGAALARLELRTVFTELWRRFPALRLADP-AQDTEFRLTTPAYGLTELMVA  397 (398)
T ss_dssp             TSCTTHHHHHHHHHHHHHHHHHHCTTCEESST-TCCCEEECSSSBCEEEECEEE
T ss_pred             CcCCCHHHHHHHHHHHHHHHHHhCCCCEeCCC-CCccccccCcCcCCcccceee
Confidence            999999999999999999999999 8998742 122223333334444556654


No 68 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=2.3e-57  Score=443.87  Aligned_cols=368  Identities=15%  Similarity=0.165  Sum_probs=298.0

Q ss_pred             ccCCChhHHHHHHHHHhcCcceEEEEeCC----eeEEEecCHHHHHHHhcC-CCCCCCCchhhhhhhhcccceeeCcCCh
Q 009414           84 LMTNLPHHNLAAAAEAYKAKRVMAFSLGE----TRVIITCSPDVAKEILNS-SVFADRPVKESAYSLMFNRAIGFAPYGV  158 (535)
Q Consensus        84 ~~~~~~~~~l~~~~~ky~~G~v~~~~~g~----~~~vvv~dp~~i~~i~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~  158 (535)
                      .+..+++.++.+++ +|  |||+++++|+    .++++|+||+.+++|+++ ..|++++..........+.+.++..+|+
T Consensus         9 ~~~~~p~~~~~~lr-~y--Gpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~   85 (384)
T 3oo3_A            9 RLRLDPVPEFEELQ-KA--GPLHEYDTEPGMDGRKQWLVTGHDEVRAILADHERFSSMRPVDDEADRALLPGILQAYDPP   85 (384)
T ss_dssp             EETTEECHHHHHHH-HT--CSEECCCCC------CEEEECCHHHHHHHHHCTTTEECSCCCC-----CCCTTCGGGCCTT
T ss_pred             ccccChhHHHHHHH-hc--CCeeecccccccCCCCEEEEcCHHHHHHHHhCchhccCCccccccccccccccccccCCCh
Confidence            34578999999994 99  9999999986    899999999999999985 5788877654332212223344556999


Q ss_pred             hHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHhcccccccCCCCchHHH
Q 009414          159 YWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEAR  238 (535)
Q Consensus       159 ~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~  238 (535)
                      .|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.+ .++++|+.+.+...+.+.+...+||.+.+.        ..
T Consensus        86 ~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~--------~~  155 (384)
T 3oo3_A           86 DHTRLRRTV-APAYSARRMERLRPRIEEIVEECLDDFES-VGAPVDFVRHAAWPIPAYIACEFLGVPRDD--------QA  155 (384)
T ss_dssp             HHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH-SCSSEEHHHHTTTHHHHHHHHHHHTCCGGG--------HH
T ss_pred             hHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHHHcCCCHHH--------HH
Confidence            999999999 68999999999999999999999999976 466899999999988888888899987543        23


Q ss_pred             HHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCCCC
Q 009414          239 RLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDR  318 (535)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~  318 (535)
                      .+.+.+...+.          .+         ..+...++.+.+.+++.+.+++++++.    . .|+++.+++. ++++
T Consensus       156 ~~~~~~~~~~~----------~~---------~~~~~~~~~~~~~~~~~~~i~~~~~~~----~-~d~l~~ll~~-~~~~  210 (384)
T 3oo3_A          156 ELSRMIRESRE----------SR---------LPRQRTLSGLGIVNYTKRLTSGKRRDP----G-DGMIGVIVRE-HGAE  210 (384)
T ss_dssp             HHHHHHHHHHH----------CS---------CHHHHHHHHHHHHHHHHHHHHHHHHSC----C-SSHHHHHHHH-HGGG
T ss_pred             HHHHHHHHHhc----------cC---------ChHHHHHHHHHHHHHHHHHHHHHHhCC----C-CCHHHHHHHh-cCCC
Confidence            34444443332          00         123455677788899999998876532    2 3999999986 3446


Q ss_pred             CCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCC
Q 009414          319 LSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPP  398 (535)
Q Consensus       319 l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~  398 (535)
                      ++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++.                  |+|||+|+||++|+
T Consensus       211 l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~------------------l~a~i~E~lRl~p~  272 (384)
T 3oo3_A          211 ISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL------------------IDSATEEVLRHASI  272 (384)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG------------------HHHHHHHHHHHHCS
T ss_pred             CCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH------------------HHHHHHHHHHhCCc
Confidence            999999999999999999999999999999999999999999999874                  89999999999999


Q ss_pred             CCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCC
Q 009414          399 GPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRT  478 (535)
Q Consensus       399 ~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~  478 (535)
                      ++... +|.+.+|++++||.||||+.|.++.+++|+     +||++|+|+||.               ..++|||.|+|.
T Consensus       273 ~~~~~-~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~~---------------~~~~~FG~G~r~  331 (384)
T 3oo3_A          273 VEAPA-PRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITREK---------------ATHMAFGHGIHH  331 (384)
T ss_dssp             CSCCS-CEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCSC---------------CCCCTTCCSTTS
T ss_pred             ccCCc-ceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCCC---------------CCcCCCCCCCcC
Confidence            98532 899999999999999999999999999999     899999999951               369999999999


Q ss_pred             CcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccc-cccccccCceeEE
Q 009414          479 CPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVL-RLSCEMKNPLTVR  529 (535)
Q Consensus       479 C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~  529 (535)
                      |+|++||++|++++++.|+++| ++++.++. .++.... +...+....++|+
T Consensus       332 C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~~~~lpv~  383 (384)
T 3oo3_A          332 CIGAPLARLQLRVALPAVVGRFPSLRLAVPE-EDLRFKPGRPAPFAVEELPLE  383 (384)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEESSCG-GGCCEECSSSSCCEESCCEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCCCCeeCCCC-ccceeecccccccCcceeeee
Confidence            9999999999999999999999 99998642 1222222 3344455667765


No 69 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=1e-56  Score=443.47  Aligned_cols=375  Identities=14%  Similarity=0.144  Sum_probs=295.8

Q ss_pred             CChhHHHHHHHHHhcCcceEEEEe-CCeeEEEecCHHHHHHHhcC-CCCCCCCch---hh-------hhhhhcccceeeC
Q 009414           87 NLPHHNLAAAAEAYKAKRVMAFSL-GETRVIITCSPDVAKEILNS-SVFADRPVK---ES-------AYSLMFNRAIGFA  154 (535)
Q Consensus        87 ~~~~~~l~~~~~ky~~G~v~~~~~-g~~~~vvv~dp~~i~~i~~~-~~~~~~~~~---~~-------~~~~~~g~~~~~~  154 (535)
                      .+++.++.++++ +  |||+++.. ++.++++|++++.+++++++ ..|++++..   ..       ......+.++ +.
T Consensus        38 ~~p~~~~~~lr~-~--gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~  113 (426)
T 3rwl_A           38 DSVGEYFKRLRK-D--DPVHYCADSAFGPYWSITKYNDIMHVDTNHDIFSSDAGYGGIIIDDGIQKGGDGGLDLPNF-IA  113 (426)
T ss_dssp             TCHHHHHHHHHH-H--CSEEEESCCTTCSEEEECSHHHHHHHHHCTTTEECCGGGTCSSSSCCC-------CCCCCG-GG
T ss_pred             CCccHHHHHHHh-c--CCeeeccCCCCCCEEEEcCHHHHHHHHcCCcccccccccCCCCcccccccccccccccCcc-cc
Confidence            468999999986 4  89999887 45678999999999999986 456665421   10       0111122344 44


Q ss_pred             cCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCC
Q 009414          155 PYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSS  233 (535)
Q Consensus       155 ~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~  233 (535)
                      .+|+.|+++|+++ .+.|+++.++.+.+.+.+.++++++.+.  .++++|+...+ ..++.++++. +||.+...     
T Consensus       114 ~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~--~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-----  184 (426)
T 3rwl_A          114 MDRPRHDEQRKAV-SPIVAPANLAALEGTIRERVSKTLDGLP--VGEEFDWVDRVSIEITTQMLAT-LFDFPFEE-----  184 (426)
T ss_dssp             CCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHTSC--SSSCEEHHHHTHHHHHHHHHHH-HHTCCGGG-----
T ss_pred             cCchHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhh--cCCCcchHHHHHHHHHHHHHHH-HcCCCHHH-----
Confidence            5999999999999 6899999999999999999999999984  36689977766 6788888776 89976433     


Q ss_pred             chHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhcc
Q 009414          234 NTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSL  313 (535)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~  313 (535)
                         ...+....+....    ...    +..     ....+...++.+.+.+++.+.++++++.    +...|+++.|++.
T Consensus       185 ---~~~~~~~~~~~~~----~~~----~~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~----~~~~dll~~ll~~  244 (426)
T 3rwl_A          185 ---RRKLTRWSDVTTA----APG----GGV-----VESWDQRKTELLECAAYFQVLWNERVNK----DPGNDLISMLAHS  244 (426)
T ss_dssp             ---THHHHHHHHHHTC----CTT----SSS-----CSSHHHHHHHHHHHHHHHHHHHHHHHTS----CCCSSHHHHHHHC
T ss_pred             ---HHHHHHHHHHHHh----ccC----ccc-----cccHHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCHHHHHHhc
Confidence               1222222221111    100    110     1112344556678888999998887322    2334999999998


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhh
Q 009414          314 SGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVV  393 (535)
Q Consensus       314 ~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~Etl  393 (535)
                      ..+++++++++.+++..+++||+|||+++++|++++|++||++|++||+|++                  |++++|+|+|
T Consensus       245 ~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~~------------------~l~a~i~E~L  306 (426)
T 3rwl_A          245 PATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPA------------------LVETMVPEII  306 (426)
T ss_dssp             GGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhChH------------------hHHHHHHHHH
Confidence            7666799999999999999999999999999999999999999999999953                  8999999999


Q ss_pred             cCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccC
Q 009414          394 RLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFG  473 (535)
Q Consensus       394 Rl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg  473 (535)
                      |++|+++..  +|.+.+|++++|+.||||+.|.++.+++|+||++|+||++|+|+||..              ..++|||
T Consensus       307 Rl~p~~~~~--~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~--------------~~~l~FG  370 (426)
T 3rwl_A          307 RWQTPLAHM--RRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP--------------RQHLSFG  370 (426)
T ss_dssp             HHHCSBCCE--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT--------------TCCSTTC
T ss_pred             HhcCccccC--ceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC--------------CCccCCC
Confidence            999999986  899999999999999999999999999999999999999999999943              3589999


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEe
Q 009414          474 SGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHA  532 (535)
Q Consensus       474 ~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  532 (535)
                      .|+|.|+|++||++|++++++.|+++| ++++.++.  ++  ..+...+....++|+++|
T Consensus       371 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~--~~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          371 FGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEP--ER--VRSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             CSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSCC--EE--CCCSSBCCEEECEEEEEC
T ss_pred             CCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCCC--cc--cccccccCcceeeEEEeC
Confidence            999999999999999999999999999 99988632  22  223334455788888875


No 70 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=2.8e-56  Score=436.38  Aligned_cols=372  Identities=16%  Similarity=0.202  Sum_probs=294.3

Q ss_pred             CChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCchhhhhh-hhcccceeeCcCChhHHHHHH
Q 009414           87 NLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKESAYS-LMFNRAIGFAPYGVYWRTLRR  165 (535)
Q Consensus        87 ~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~g~~w~~~Rr  165 (535)
                      .+++..+.++++ +  |||+++..|   .++|++++.+++++++..|+.++....... ...+.++ +..+|+.|+++|+
T Consensus        20 ~dp~~~~~~lr~-~--~pv~~~~~g---~~~v~~~~~v~~~l~d~~fs~~~~~~~~~~~~~~~~~l-~~~dg~~h~~~R~   92 (394)
T 2wiy_A           20 NNPYPWYRRLQQ-D--HPVHKLEDG---TYLVSRYADVSHFAKLPIMSVEPGWADAGPWAVASDTA-LGSDPPHHTVLRR   92 (394)
T ss_dssp             HCCHHHHHHHHH-H--CSEEECTTS---CEEECCHHHHHHHTTSTTEECHHHHHTCGGGGGGGGSG-GGCCTTHHHHHHH
T ss_pred             cCccHHHHHHHh-c--CCeEEecCC---eEEEcCHHHHHHHHcCCCccccccccccccchhccccc-ccCCchHHHHHHH
Confidence            478888988865 5  699876644   589999999999998766655432211111 1123444 4559999999999


Q ss_pred             HhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHHhcccccccCCCCchHHHHHHHHHH
Q 009414          166 IAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVE  245 (535)
Q Consensus       166 ~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~  245 (535)
                      .+ .+.|+++.++.+.+.+++.++++++.+..  ++.+|+.+.+..++.++++..+||.+.+.        ...+.+.+.
T Consensus        93 ~~-~~~fs~~~~~~~~~~i~~~~~~l~~~~~~--~~~~d~~~~~~~~~~~vi~~~~~G~~~~~--------~~~~~~~~~  161 (394)
T 2wiy_A           93 QT-NKWFTPKLVDGWVRTTRELVGDLLDGVEA--GQVIEARRDLAVVPTHVTMARVLQLPEDD--------ADAVMEAMF  161 (394)
T ss_dssp             HH-HTTCSHHHHHHHTHHHHHHHHHHHHTCCT--TCCEEHHHHHTHHHHHHHHHHHHTCCCCC--------HHHHHHHHH
T ss_pred             HH-HhccCHHHHHHHHHHHHHHHHHHHHHHhc--cCCeeHHHHHHhhhHHHHHHHHcCCCHhH--------HHHHHHHHH
Confidence            99 68999999999999999999999998853  56899999999999999999999976432        223333332


Q ss_pred             HHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCCCCCCHHHHH
Q 009414          246 EGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIV  325 (535)
Q Consensus       246 ~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~  325 (535)
                      .....      ....|.      .....+..++...+.+++.+.|++++++.     ..|+++.|++...+++++++++.
T Consensus       162 ~~~~~------~~~~p~------~~~~~~~~~~~~~l~~~~~~~i~~rr~~~-----~~dll~~Ll~~~~~~~ls~~el~  224 (394)
T 2wiy_A          162 EAMLM------QSAEPA------DGDVDRAAVAFGYLSARVAEMLEDKRVNP-----GDGLADSLLDAARAGEITESEAI  224 (394)
T ss_dssp             HHHGG------GSSSCC------TTHHHHHHHHHHHHHHHHHHHHHHHHHSC-----CSSHHHHHHHHHHTTSSCHHHHH
T ss_pred             HHHHh------ccCCcc------chHHHHHHHHHHHHHHHHHHHHHHhhcCC-----CCcHHHHHHHhhhcCCCCHHHHH
Confidence            22110      011121      11223445566788889999998887532     23899999986555569999999


Q ss_pred             HHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCccccc
Q 009414          326 AVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLLSWA  405 (535)
Q Consensus       326 ~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~  405 (535)
                      +++..+++||+|||+++++|++++|++||++|+++++|++                  |++++|+|+||++|+++..  .
T Consensus       225 ~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~LRl~pp~~~~--~  284 (394)
T 2wiy_A          225 ATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDES------------------ARAAIINEMVRMDPPQLSF--L  284 (394)
T ss_dssp             HHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHSCSBCEE--E
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhChH------------------hHHHHHHHHHhhCCCccCe--e
Confidence            9999999999999999999999999999999999999863                  7899999999999999876  8


Q ss_pred             ccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHH
Q 009414          406 RLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLG  485 (535)
Q Consensus       406 R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A  485 (535)
                      |.+.+|++++|+.||||+.|.++.+++||||++|+||++|||+||++.             ..++|||.|+|.|+|++||
T Consensus       285 R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~-------------~~~l~FG~G~r~C~G~~lA  351 (394)
T 2wiy_A          285 RFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA-------------SRNLSFGLGPHSCAGQIIS  351 (394)
T ss_dssp             EEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG-------------SCCSTTCCGGGSCTTHHHH
T ss_pred             EEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC-------------CCccCCCCCCCcCCcHHHH
Confidence            999999999999999999999999999999999999999999999742             2589999999999999999


Q ss_pred             HHHHHHHHHHHhhcce-eeecCCCCCCccccccccccccCceeEEE
Q 009414          486 LATVSFWVGTLLHEFK-WVQSDYDPVDLSEVLRLSCEMKNPLTVRV  530 (535)
Q Consensus       486 ~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  530 (535)
                      ++|++++++.|+++|+ +++.++  .++.  .+...+....++|++
T Consensus       352 ~~e~~~~l~~ll~~~~~~~l~~~--~~~~--~~~~~~g~~~lpv~~  393 (394)
T 2wiy_A          352 RAEATTVFAVLAERYERIELAEE--PTVA--HNDFARRYRKLPIVL  393 (394)
T ss_dssp             HHHHHHHHHHHHHHCSCEEESSC--CEEC--CCSSBCCEEECEEEE
T ss_pred             HHHHHHHHHHHHHhCCCceECCC--Cccc--ccccccCcceeeEEe
Confidence            9999999999999998 898762  2332  223344446677765


No 71 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=8.6e-56  Score=429.35  Aligned_cols=354  Identities=17%  Similarity=0.198  Sum_probs=280.3

Q ss_pred             hhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCC-CCCCCCc-----hhhhh-hh--h---cccceeeCcC
Q 009414           89 PHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSS-VFADRPV-----KESAY-SL--M---FNRAIGFAPY  156 (535)
Q Consensus        89 ~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~-~~~~~~~-----~~~~~-~~--~---~g~~~~~~~~  156 (535)
                      ++..+.++ ++|  |||+++  |  +.++|+||+.+++++.+. .|++++.     ..... ..  .   .|.++++ .+
T Consensus         1 p~~~~~~l-r~~--Gpv~~~--g--~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~   72 (368)
T 1io7_A            1 MYDWFSEM-RKK--DPVYYD--G--NIWQVFSYRYTKEVLNNFSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLT-SD   72 (368)
T ss_dssp             CHHHHHHH-HHH--CSEEEC--S--SCEEECSHHHHHHHHHCTTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGG-CC
T ss_pred             CCHHHHHH-Hhc--CCeEeE--C--CEEEEecHHHHHHHHcCccccccccccccccccccccccccccccccccccc-CC
Confidence            35677788 589  999876  5  478999999999999864 5888764     11110 11  1   2245544 48


Q ss_pred             ChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCCch
Q 009414          157 GVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSSNT  235 (535)
Q Consensus       157 g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~~~  235 (535)
                      |+.|+++|+.+ .+.|+++.++.+.+.+++.++++++.+ + . +.+|+.+.+ ..+++++++.+ ||.+++.       
T Consensus        73 g~~h~~~R~~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l-~-~-g~~d~~~~~~~~~~~~vi~~~-~G~~~~~-------  140 (368)
T 1io7_A           73 PPLHDELRSMS-ADIFSPQKLQTLETFIRETTRSLLDSI-D-P-REDDIVKKLAVPLPIIVISKI-LGLPIED-------  140 (368)
T ss_dssp             TTHHHHHHGGG-TTTTCHHHHHHHHHHHHHHHHHHHHTC-C-T-TSEEHHHHTTTHHHHHHHHHH-HTCCGGG-------
T ss_pred             ChHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHh-h-c-CCccHHHHHHHHHHHHHHHHH-hCCCHHH-------
Confidence            99999999999 689999999999999999999999999 4 3 379999866 78999999999 9987543       


Q ss_pred             HHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCC
Q 009414          236 EARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSG  315 (535)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~  315 (535)
                       ...+....    ..+...  .. .|.       . .++..++.+.+.+++.+.+       +  ..+ |+++.|++.  
T Consensus       141 -~~~~~~~~----~~~~~~--~~-~p~-------~-~~~~~~~~~~~~~~~~~~i-------~--~~~-d~l~~ll~~--  192 (368)
T 1io7_A          141 -KEKFKEWS----DLVAFR--LG-KPG-------E-IFELGKKYLELIGYVKDHL-------N--SGT-EVVSRVVNS--  192 (368)
T ss_dssp             -HHHHHHHG----GGCTTS--CC-CTT-------C-HHHHHHHHHHHHHHHHHHT-------T--SSC-HHHHHHHTS--
T ss_pred             -HHHHHHHH----HHHHhc--cC-ChH-------H-HHHHHHHHHHHHHHHHHHh-------C--CCC-CHHHHHHhc--
Confidence             12222221    111110  00 121       1 1344455666777777666       1  223 999999976  


Q ss_pred             CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcC
Q 009414          316 PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRL  395 (535)
Q Consensus       316 ~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl  395 (535)
                        +++++++.+++..+++||+|||+++++|++++|++|| +|+++++| +                  |++|||+|+||+
T Consensus       193 --~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~------------------~l~a~i~E~lRl  250 (368)
T 1io7_A          193 --NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N------------------LYLKAIEEALRY  250 (368)
T ss_dssp             --SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T------------------CHHHHHHHHHHH
T ss_pred             --cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c------------------hHHHHHHHHHHh
Confidence              6899999999999999999999999999999999999 99999999 2                  799999999999


Q ss_pred             CCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCC
Q 009414          396 HPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSG  475 (535)
Q Consensus       396 ~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G  475 (535)
                      +|+++.+  +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|||+   +            ..++|||.|
T Consensus       251 ~p~~~~~--~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~---~------------~~~~~FG~G  313 (368)
T 1io7_A          251 SPPVMRT--VRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN---P------------NPHLSFGSG  313 (368)
T ss_dssp             SCSBCCE--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC---S------------CCCCTTCCG
T ss_pred             CcccccC--ceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC---C------------CCCcCCCCC
Confidence            9999966  8999999999999999999999999999999999999999999993   1            248999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHHhhcce-eeecCCCCCCccccccccccccCceeEEEEecc
Q 009414          476 RRTCPGKGLGLATVSFWVGTLLHEFK-WVQSDYDPVDLSEVLRLSCEMKNPLTVRVHARR  534 (535)
Q Consensus       476 ~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (535)
                      +|.|+|++||++|++++++.|+++|+ +++.+   .++.  .....++...++|++++|+
T Consensus       314 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~---~~~~--~~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          314 IHLCLGAPLARLEARIAIEEFSKRFRHIEILD---TEKV--PNEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             GGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE---EEEC--CCSSBCCEEEEEEEEEC--
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC---ceec--cCCcccCCceeEEEeccCC
Confidence            99999999999999999999999996 99875   2222  2334456678999999885


No 72 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=1.9e-55  Score=426.20  Aligned_cols=352  Identities=16%  Similarity=0.173  Sum_probs=282.5

Q ss_pred             hhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCC-CCCCCCc-hh-hh----hh-hhcc----cceeeCcC
Q 009414           89 PHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSS-VFADRPV-KE-SA----YS-LMFN----RAIGFAPY  156 (535)
Q Consensus        89 ~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~-~~~~~~~-~~-~~----~~-~~~g----~~~~~~~~  156 (535)
                      ++..+.+++ +|  |||++++ |   +++|+||+.+++++.+. .|++++. .. ..    .. .+.|    .++++. +
T Consensus         1 p~~~~~~lr-~~--gpv~~~~-g---~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-d   72 (367)
T 3b4x_A            1 MYDWFKQMR-KE--SPVYYDG-K---VWNLFKYEDCKMVLNDHKRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTS-D   72 (367)
T ss_dssp             CHHHHHHHH-HH--CSEEECS-S---SEEECSHHHHHHHHHCTTTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGC-C
T ss_pred             CCHHHHHHH-Hc--CCceeeC-C---EEEEecHHHHHHHHcCchhhccCcccccccccccccccchhhcccccccccC-C
Confidence            356677774 79  9998887 4   68999999999999864 6777642 21 11    02 2334    566554 8


Q ss_pred             ChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCCch
Q 009414          157 GVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSSNT  235 (535)
Q Consensus       157 g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~~~  235 (535)
                      |+.|+++|+.+ .+.|+++.++.  +.+++.++++++.+.   + .+|+.+.+ ..+++++++. +||.+ +.       
T Consensus        73 g~~h~~~R~~~-~~~fs~~~l~~--~~i~~~~~~l~~~l~---g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~-------  136 (367)
T 3b4x_A           73 PPLHDELRNLT-ADAFNPSNLPV--DFVREVTVKLLSELD---E-EFDVIESFAIPLPILVISK-MLGIN-PD-------  136 (367)
T ss_dssp             TTHHHHHHHTT-GGGGSGGGSCH--HHHHHHHHHHHHTCC---S-EEEHHHHTTTHHHHHHHHH-HHTCC-CC-------
T ss_pred             chhHHHHHHHH-HHhcCHhhhcc--hHHHHHHHHHHHhcc---C-CcchHHHHHHhhHHHHHHH-HcCCC-Cc-------
Confidence            99999999999 68999999988  999999999999885   3 59999654 8999999999 79987 32       


Q ss_pred             HHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCC
Q 009414          236 EARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSG  315 (535)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~  315 (535)
                       ...+....+.......      ..|...        +.. ++.+.+.+++.+.|++++++     ...|+++.|++.  
T Consensus       137 -~~~~~~~~~~~~~~~~------~~p~~~--------~~~-~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~--  193 (367)
T 3b4x_A          137 -VKKVKDWSDLVALRLG------RADEIF--------SIG-RKYLELISFSKKELDSRKGK-----EIVDLTGKIANS--  193 (367)
T ss_dssp             -HHHHHHHHHHHHTTTT------STTGGG--------CCC-HHHHHHHHHHHHHHHHHTTT-----CCSSHHHHHHTS--
T ss_pred             -HHHHHHHHHHHHhccC------CChhhH--------HHH-HHHHHHHHHHHHHHHHHhcC-----CCCCHHHHHHhc--
Confidence             2233333333333211      122211        111 45667888888888877643     223999999976  


Q ss_pred             CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcC
Q 009414          316 PDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRL  395 (535)
Q Consensus       316 ~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl  395 (535)
                        +++++++.+++..+++||+|||+++++|++++|++ |++|+++++|++                    +|||+|+||+
T Consensus       194 --~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~--------------------~a~i~E~lRl  250 (367)
T 3b4x_A          194 --NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA--------------------LKAVEEALRF  250 (367)
T ss_dssp             --SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS--------------------HHHHHHHHHH
T ss_pred             --cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc--------------------hHHHHHHHHh
Confidence              68999999999999999999999999999999999 999999999953                    8999999999


Q ss_pred             CCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCC
Q 009414          396 HPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSG  475 (535)
Q Consensus       396 ~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G  475 (535)
                      +|+++.+  +|.+.+|++++|+.||||+.|.++.+++|+||++|+||++|+|+||.               ..++|||.|
T Consensus       251 ~p~~~~~--~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------------~~~l~FG~G  313 (367)
T 3b4x_A          251 SPPVMRT--IRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP---------------NPHLSFGSG  313 (367)
T ss_dssp             SCSBCCE--EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS---------------CCCCTTCCS
T ss_pred             cCcccCe--eEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC---------------CCCcCCCCC
Confidence            9999966  89999999999999999999999999999999999999999999983               258999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEe
Q 009414          476 RRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHA  532 (535)
Q Consensus       476 ~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  532 (535)
                      +|.|+|++||++|++++++.|+++| ++++.++   ++..  +...+....++|++.+
T Consensus       314 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~---~~~~--~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          314 IHLCLGAPLARLEARIALEEFAKKFRVKEIVKK---EKID--NEVLNGYRKLVVRVER  366 (367)
T ss_dssp             TTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE---EECC--CSSBCSEEEEEEEEEE
T ss_pred             CccCccHHHHHHHHHHHHHHHHHhCCCceeCCc---cccc--cccccCcceEEEEecC
Confidence            9999999999999999999999999 7999873   3322  3444555788888753


No 73 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=1.2e-55  Score=435.18  Aligned_cols=382  Identities=18%  Similarity=0.236  Sum_probs=297.1

Q ss_pred             CCccccccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCchhhh--------hhhhc
Q 009414           76 LPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKESA--------YSLMF  147 (535)
Q Consensus        76 ~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~--------~~~~~  147 (535)
                      +|.+++.  ...+++.+ .. .++|  ||++++++|+.. ++|++++.+++|+++..+.........        .....
T Consensus        24 lp~~~~~--~~~~P~~~-~~-lr~~--gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~~   96 (416)
T 3p3o_A           24 LPFLDFT--DPNFSWDS-PE-VAEA--REKSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDFM   96 (416)
T ss_dssp             CCBCCTT--STTCCTTS-HH-HHHH--HHHCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHHH
T ss_pred             CCCCCcc--cccCCchH-HH-HHHh--CCccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhhh
Confidence            4544432  24567777 44 4578  999999998777 899999999999997655543211100        00112


Q ss_pred             ccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHH-HHHHHHHHHHHHHHhcccc
Q 009414          148 NRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRD-ILKPASLNNMMCSVFGRKY  226 (535)
Q Consensus       148 g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~-~~~~~~~~vi~~~~fG~~~  226 (535)
                      +.++ +..+|+.|+++||++ .+.|+++.++.+.+.+++.++++++.+ .  ++.+|+.. +...+++++++. +||.+.
T Consensus        97 ~~~l-~~~dg~~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l-~--~g~~d~~~~~~~~~~~~vi~~-l~G~~~  170 (416)
T 3p3o_A           97 VDFL-QSLDGADHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKL-P--QGDFDFVQHFPHPLPALVMCQ-LLGFPL  170 (416)
T ss_dssp             HHSG-GGCCHHHHHHHHHTT-CGGGSHHHHHHHHHHHHHHHHHHHHTC-C--SSSEEHHHHTTTHHHHHHHHH-HHTCCG
T ss_pred             cCcc-ccCCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhh-c--cCCccHHHHHHHHHHHHHHHH-HhCCCH
Confidence            3344 445999999999999 689999999999999999999999999 4  34599654 556799999998 588764


Q ss_pred             cccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcH
Q 009414          227 ALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDF  306 (535)
Q Consensus       227 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~  306 (535)
                      ..        ...+..........         +...   ......++..++.+.+.+++.+.|++++++.     ..|+
T Consensus       171 ~~--------~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~-----~~dl  225 (416)
T 3p3o_A          171 ED--------YDTVGRLSIETNLG---------LALS---NDQDILVKVEQGLGRMFDYLVAAIEKRKVEP-----GDDL  225 (416)
T ss_dssp             GG--------HHHHHHHHHTTCGG---------GTTC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-----CSSH
T ss_pred             HH--------HHHHHHHHHHHHhh---------cccc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-----CccH
Confidence            33        23333322222111         1110   1233456677888899999999999887652     2399


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchh
Q 009414          307 VDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLP  386 (535)
Q Consensus       307 l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~  386 (535)
                      ++.|++...+++++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |++
T Consensus       226 l~~ll~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~  287 (416)
T 3p3o_A          226 TSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE------------------LAP  287 (416)
T ss_dssp             HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHH
T ss_pred             HHHHHHhhccCCCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHH
Confidence            99999876555899999999999999999999999999999999999999999999975                  789


Q ss_pred             HHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCC
Q 009414          387 AVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSD  466 (535)
Q Consensus       387 a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~  466 (535)
                      ++|+|+||++|+++... +|.+.+|++++|+.||||+.|.++.+++|+||++|+||++|+|+||..              
T Consensus       288 a~i~E~lRl~p~~~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~--------------  352 (416)
T 3p3o_A          288 QAVEEVLRWSPTLPVTA-TRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE--------------  352 (416)
T ss_dssp             HHHHHHHHHSCSCSSCC-EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS--------------
T ss_pred             HHHHHHHhhccccccCc-ceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC--------------
Confidence            99999999999994433 899999999999999999999999999999999999999999999732              


Q ss_pred             CceeccCCCCCCCcchhHHHHHHHHHHHHHhhcce-eeecCCCCCCccccccccccccCceeEEEEe
Q 009414          467 LRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEFK-WVQSDYDPVDLSEVLRLSCEMKNPLTVRVHA  532 (535)
Q Consensus       467 ~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  532 (535)
                      ..++|||.|+|.|+|++||++|++++++.|+++|+ +++.++  .++.  .+...+....++|++.|
T Consensus       353 ~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~~--~~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          353 APSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGE--ITWR--HELGVAGPDALPLRFGA  415 (416)
T ss_dssp             SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSC--CEEC--CCTTCCCEEECEEEESC
T ss_pred             CCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCC--Ccee--cCCCccCcceeeEEEec
Confidence            35899999999999999999999999999999995 777653  2332  23333344677787754


No 74 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=6.2e-55  Score=419.09  Aligned_cols=320  Identities=16%  Similarity=0.149  Sum_probs=258.8

Q ss_pred             HHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCC-CCCCCCchhhhhhhhcccceeeCcCChhHHHHHHHhhhccCCHhh
Q 009414           98 EAYKAKRVMAFSLGETRVIITCSPDVAKEILNSS-VFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQ  176 (535)
Q Consensus        98 ~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~  176 (535)
                      ++|  |||+++   |  +++|+||+.+++|+.+. .|++++..... .. .+.++++. +|+.|+++|+.+ .+.|+++.
T Consensus         2 r~~--gpv~~~---g--~~vv~~~~~v~~vl~~~~~f~~~~~~~~~-~~-~~~~l~~~-~g~~~~~~R~~~-~~~fs~~~   70 (343)
T 2rfb_A            2 RLN--DPVHYD---G--AWHVYKYSDVKHVLMNDKIFSSNPGNRYS-NA-GGISFITM-DNPEHKEFRDIS-APYFLPSK   70 (343)
T ss_dssp             -CC--CCEEET---T--EEEECSHHHHHHHHHCTTTEESSCSSCCC-----CCGGGGC-CHHHHHHHHHHH-HHHHSHHH
T ss_pred             CCc--CCeeee---C--eEEEcCHHHHHHHHhChhhcccCCcCCCC-Cc-cccccccC-CchHHHHHHHHh-hhhcCHHH
Confidence            467  999765   3  79999999999999864 47777521111 12 35666554 999999999999 68999999


Q ss_pred             hhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccc
Q 009414          177 INSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLN  255 (535)
Q Consensus       177 l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (535)
                      ++.+.+.+++.++++++.+.     ++|+.+.+ ..+++++++.+ ||.+.+.        ...+.+....+...   . 
T Consensus        71 l~~~~~~i~~~~~~l~~~l~-----~~d~~~~~~~~~~~~vi~~~-~G~~~~~--------~~~~~~~~~~~~~~---~-  132 (343)
T 2rfb_A           71 INDYKDFIEETSNDLIKNID-----NKDIISEYAVRLPVNIISKI-LGIPDSD--------MPLFKLWSDYIIGN---K-  132 (343)
T ss_dssp             HGGGHHHHHHHHHHHHTTCT-----TSCHHHHTTTHHHHHHHHHH-HTCCGGG--------HHHHHHHHHHHHTS---C-
T ss_pred             HHHHHHHHHHHHHHHHHhcc-----ccCHHHHHhhhhhHHHHHHH-cCCCHHH--------HHHHHHHHHHHhhc---c-
Confidence            99999999999999998884     68998865 89999999998 9987543        22343333333321   1 


Q ss_pred             cccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCCC-CCCCHHHHHHHHHHHHHh
Q 009414          256 FSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSGP-DRLSDHDIVAVLWEMIFR  334 (535)
Q Consensus       256 ~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~a  334 (535)
                          .|.+     . ..++. ++.+.+.+++.+.+           .+ | ++.|++...+ .+++++++.+++..+++|
T Consensus       133 ----~p~~-----~-~~~~~-~~~~~~~~~~~~~i-----------~~-d-l~~ll~~~~~~~~l~~~ei~~~~~~~~~A  188 (343)
T 2rfb_A          133 ----RDEN-----F-NYVNN-RMVSRLLEIFKSDS-----------HG-I-INVLAGSSLKNRKLTMDEKIKYIMLLIIG  188 (343)
T ss_dssp             ----CSSH-----H-HHHHH-HHHHHHHHHHHSCC-----------SS-H-HHHHHTCBCSSSBCCHHHHHHHHHHHHHH
T ss_pred             ----Ccch-----h-hHHHH-HHHHHHHHHHHHHH-----------hc-c-HHHHHhhhcCCCCCCHHHHHHHHHHHHHH
Confidence                1321     0 11223 45555555555544           23 8 9999886533 359999999999999999


Q ss_pred             ccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCC-Ccccccccccccce
Q 009414          335 GTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPG-PLLSWARLAITDTT  413 (535)
Q Consensus       335 G~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~-~~~~~~R~~~~d~~  413 (535)
                      |+|||+++++|++++|++||++|+++++|+                     +|||+|+||++|++ +.+  +|.+.+|++
T Consensus       189 G~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~a~i~E~lRl~p~~~~~~--~R~~~~d~~  245 (343)
T 2rfb_A          189 GNETTTNLIGNMIRVIDENPDIIDDALKNR---------------------SGFVEETLRYYSPIQFLP--HRFAAEDSY  245 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGHHHHHHCH---------------------HHHHHHHHHHSCSBCCBC--CCEESSCEE
T ss_pred             hhHHHHHHHHHHHHHHHhCHHHHHHHHcCc---------------------HHHHHHHHhhCccccccc--ceEECCCeE
Confidence            999999999999999999999999999996                     79999999999999 865  899999999


Q ss_pred             ecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHH
Q 009414          414 VDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWV  493 (535)
Q Consensus       414 ~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l  493 (535)
                      ++||.||||+.|.++.+++|+||++|+||++|+|||+                ..++|||.|+|.|+|++||++|+++++
T Consensus       246 ~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~----------------~~~~~FG~G~r~C~G~~lA~~e~~~~l  309 (343)
T 2rfb_A          246 INNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR----------------EMHLAFGIGIHMCLGAPLARLEASIAL  309 (343)
T ss_dssp             ETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS----------------SCCCTTCCSTTSCTTHHHHHHHHHHHH
T ss_pred             ECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC----------------CCCccCCCCCccCCChHHHHHHHHHHH
Confidence            9999999999999999999999999999999999994                147999999999999999999999999


Q ss_pred             HHHhhcce-eeecCCCC
Q 009414          494 GTLLHEFK-WVQSDYDP  509 (535)
Q Consensus       494 ~~ll~~f~-~~~~~~~~  509 (535)
                      +.|+++|+ +++.++++
T Consensus       310 a~ll~~f~~~~~~~~~~  326 (343)
T 2rfb_A          310 NDILNHFKRIKIDYKKS  326 (343)
T ss_dssp             HHHHHHCSCCCBCTTTC
T ss_pred             HHHHHhCCCceeCCCcc
Confidence            99999996 99987533


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=2.2e-53  Score=417.75  Aligned_cols=384  Identities=14%  Similarity=0.147  Sum_probs=282.4

Q ss_pred             CCCCCcccc---ccccCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC-CCCCCCCchh--hh--hh
Q 009414           73 PRGLPFIGS---MSLMTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS-SVFADRPVKE--SA--YS  144 (535)
Q Consensus        73 P~~~P~iG~---~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~~~~~--~~--~~  144 (535)
                      +.++|.+|-   ...+..+|+.++.++++ +  |||+  ++++..+++|++++.+++++++ ..|+......  ..  ..
T Consensus        17 ~~~~P~~~~dp~~~~~~~dP~~~~~~lR~-~--gPV~--~~~~~~~~~vt~~~~v~~vl~d~~~fs~~~~~~~~~~~~~~   91 (412)
T 4dnj_A           17 GAGVPHLGIDPFALDYFADPYPEQETLRE-A--GPVV--YLDKWNVYGVARYAEVYAVLNDPLTFCSSRGVGLSDFKKEK   91 (412)
T ss_dssp             STTSCEECCCTTSHHHHHSCHHHHHHHHH-H--CSSE--EETTTTEEEECSHHHHHHHHTCTTTEESTTCSSSSCTTTSC
T ss_pred             CCCCCccCCCCCCHHHHhCcHHHHHHHHh-c--CCEE--EECCCCEEEECCHHHHHHHHcCCccccCCCccccccccccc
Confidence            345787772   23344689999999875 5  8994  6677778999999999999986 3443332111  11  11


Q ss_pred             hhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeH-HHHHHHHHHHHHHHHHhc
Q 009414          145 LMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRL-RDILKPASLNNMMCSVFG  223 (535)
Q Consensus       145 ~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl-~~~~~~~~~~vi~~~~fG  223 (535)
                      ...+.+.++..||++|+++|+++ ++.|+++.++.+++.+.+.++++++.+... ++.+|+ .++...++.++++... |
T Consensus        92 ~~~~~~~~~~~Dg~~H~r~R~~~-~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~-~~~~D~v~~~~~~~~~~~i~~l~-g  168 (412)
T 4dnj_A           92 PWRPPSLILEADPPAHTRTRAVL-SKVLSPATMKRLRDGFAAAADAKIDELLAR-GGNIDAIADLAEAYPLSVFPDAM-G  168 (412)
T ss_dssp             CSSCCCTTTTCCTTHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEETCCCCCCHHHHHHHHHHH-T
T ss_pred             cccCCCccccCChHHHHHHHhhc-ccccCHHHHHHhhHHHHHHHHHHHHhhhcc-CCCceeHHHHHhhhhHhHHHHHc-C
Confidence            11223444556999999999999 689999999999999999999999999763 456665 5666778888887765 4


Q ss_pred             ccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCC
Q 009414          224 RKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRN  303 (535)
Q Consensus       224 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  303 (535)
                      .....     ......+...   .......              ..............+..+..    +..+...  ..+
T Consensus       169 ~~~~~-----~~~~~~~~~~---~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~  220 (412)
T 4dnj_A          169 LKQEG-----RENLLPYAGL---VFNAFGP--------------PNELRQSAIERSAPHQAYVA----EQCQRPN--LAP  220 (412)
T ss_dssp             CCSTT-----GGGHHHHHHH---HHHHTSC--------------SSHHHHHHHHTCHHHHHHHH----HHTSGGG--SCT
T ss_pred             Cchhh-----hhhhhhhhhc---ccccccc--------------cHHHHHHHHHHHHHHHHHHH----HHHHhhc--ccc
Confidence            33221     1222222222   2221110              01111222222223333322    2222222  222


Q ss_pred             CcHHHHHhc-cCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCC
Q 009414          304 SDFVDVLLS-LSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSM  382 (535)
Q Consensus       304 ~d~l~~ll~-~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~l  382 (535)
                       +.+..++. ..+..+++++|+.+++..+++||+|||+++++|++++|++||++|++||+|.                  
T Consensus       221 -~~~~~l~~~~~~~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~------------------  281 (412)
T 4dnj_A          221 -GGFGACIHAFSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP------------------  281 (412)
T ss_dssp             -TSHHHHHHHTTTTTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------
T ss_pred             -ccchhhhHhhhhccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc------------------
Confidence             44444444 4455679999999999999999999999999999999999999999999874                  


Q ss_pred             CchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccc
Q 009414          383 VYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISL  462 (535)
Q Consensus       383 p~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~  462 (535)
                      .|+.++++|++|++|+++.+  .|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+|+||.           
T Consensus       282 ~~~~~~~eE~lR~~pp~~~~--~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~-----------  348 (412)
T 4dnj_A          282 SLARNAFEEAVRFESPVQTF--FRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT-----------  348 (412)
T ss_dssp             GGHHHHHHHHHHHHCSBCEE--EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC-----------
T ss_pred             cccccccceeeeecCCcccc--cccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCC-----------
Confidence            37899999999999999987  89999999999999999999999999999999999999999999973           


Q ss_pred             cCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEEEe
Q 009414          463 MGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRVHA  532 (535)
Q Consensus       463 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  532 (535)
                          ..|+|||.|+|.|+|++||++|++++++.|+++| ++++.+  +.++  ..+.+.++...++|+++|
T Consensus       349 ----~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~--~~~~--~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          349 ----SGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAG--PLKR--RFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             ----TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECS--CCEE--EECSSBEEEEECEEEEEE
T ss_pred             ----CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECC--CCee--ecCCCccCCcceeEEEEe
Confidence                3589999999999999999999999999999999 888876  3333  334455666789999986


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=8.1e-49  Score=384.25  Aligned_cols=374  Identities=12%  Similarity=0.109  Sum_probs=276.1

Q ss_pred             CCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcC-CCCCCCCchhhhhhhhcccceeeCcCChhHHHHH
Q 009414           86 TNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNS-SVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLR  164 (535)
Q Consensus        86 ~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R  164 (535)
                      ..+++..+.+++++.+ -+++..-.++ .+.+|+.++.+++|+++ ..|+.+...........+.......|+++|+++|
T Consensus        36 ~~~~~~~~~~lr~~~~-~~~~~~~~~g-g~W~vtr~~dv~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~R  113 (417)
T 4dxy_A           36 EDGYHEAWKKVQHPGI-PDLIWTPFTG-GHWIATNGDTVKEVYSDPTRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYR  113 (417)
T ss_dssp             GGCHHHHHHHHSCTTC-CSEEEESSTT-SEEEECSHHHHHHHHTCTTTEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHH
T ss_pred             hcChHHHHHHHHhhCC-CCEEecCCCC-CEEEECCHHHHHHHHcCchhccCCCcccccccccccccCcccCCcHHHHHHH
Confidence            3578888888876541 2554333333 35789999999999986 5676654332211111223334456999999999


Q ss_pred             HHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHHhcccccccCCCCchHHHHHHHH
Q 009414          165 RIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPASLNNMMCSVFGRKYALLGYSSNTEARRLSRL  243 (535)
Q Consensus       165 r~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~  243 (535)
                      +++ ++.|+++.++.+++.+++.++++++.+.+  ++.+|+...+ ..+...+++. ++|.....        ...+.+.
T Consensus       114 rll-~~~Fs~~~l~~~~~~i~~~~~~lld~l~~--~g~~D~v~~~a~~l~~~vi~~-llg~~~~d--------~~~~~~~  181 (417)
T 4dxy_A          114 KAL-DKGLNLAKIRKVEDKVREVASSLIDSFAA--RGECDFAAEYAELFPVHVFMA-LADLPLED--------IPVLSEY  181 (417)
T ss_dssp             HHH-HHHHCHHHHHTTHHHHHHHHHHHHHHHHT--TSEEEHHHHTTTTHHHHHHHH-HTTCCGGG--------HHHHHHH
T ss_pred             HHh-hhhcCHHHHHHHHHHHHHHHHHHHHHhhh--cCCeeeHHHHHhhhHHHHHHH-HcCCCHHH--------HHHHHhh
Confidence            999 68999999999999999999999999976  4568865554 4555555554 56754322        3333333


Q ss_pred             HHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCcHHHHHhccCC-CCCCCHH
Q 009414          244 VEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEHRTTQTSLQRNSDFVDVLLSLSG-PDRLSDH  322 (535)
Q Consensus       244 ~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~-~~~l~~~  322 (535)
                      ...+....             ...+.........+...+..++.++++++++.     +..|+++.|+.... ...++++
T Consensus       182 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~-----~~ddl~s~L~~~~~~~~~~~~~  243 (417)
T 4dxy_A          182 ARQMTRPE-------------GNTPEEMATDLEAGNNGFYAYVDPIIRARVGG-----DGDDLITLMVNSEINGERIAHD  243 (417)
T ss_dssp             HHHHHSCC-------------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCSHHHHHHTCEETTEECCHH
T ss_pred             hhhhcccc-------------ccChHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CccchhhhhccccccCCccchh
Confidence            33222110             01123344556667778888888888877543     23399999998654 3469999


Q ss_pred             HHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhccCCCchhHHHHhhhcCCCCCCcc
Q 009414          323 DIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRPLTESDLQSMVYLPAVVKEVVRLHPPGPLL  402 (535)
Q Consensus       323 ~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~  402 (535)
                      ++.+++..+++||+|||+++++|++++|++||++++++++|...+                  ..++ |.+|++++++..
T Consensus       244 e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~------------------~~av-ee~~~~~~~~~~  304 (417)
T 4dxy_A          244 KAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL------------------MRGA-EEMFRRFPVVSE  304 (417)
T ss_dssp             HHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH------------------HHTH-HHHHHHSCCBEE
T ss_pred             HHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc------------------ccce-eeeecccccccc
Confidence            999999999999999999999999999999999999999997754                  2223 444444555555


Q ss_pred             cccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCCCCCCccccccCCCCceeccCCCCCCCcch
Q 009414          403 SWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNPEAADMDISLMGSDLRLAPFGSGRRTCPGK  482 (535)
Q Consensus       403 ~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~  482 (535)
                        .|.+.+|++++|+.||+|+.|.++.+++||||++|+||++|+|+|+               ...|+|||.|+|.|+|+
T Consensus       305 --~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~---------------~~~~l~FG~G~r~ClG~  367 (417)
T 4dxy_A          305 --ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR---------------SISHSTFGGGPHRCAGM  367 (417)
T ss_dssp             --EEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS---------------CCCCCTTCCGGGSCTTH
T ss_pred             --ccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC---------------CCCCCCcCCCcccCccH
Confidence              7999999999999999999999999999999999999999999993               24589999999999999


Q ss_pred             hHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEEE
Q 009414          483 GLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVRV  530 (535)
Q Consensus       483 ~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  530 (535)
                      +||++|++++++.||++| ++++.+++. ++..  +...+....++|++
T Consensus       368 ~LA~~E~~i~l~~Ll~rfp~~~l~~~~~-~~~~--~~~~~g~~~LPv~~  413 (417)
T 4dxy_A          368 HLARMEVIVTLEEWLKRIPEFSFKEGET-PIYH--SGIVAAVENVPLVW  413 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSCEECTTCC-CEEE--CSSBCEEECCEEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCCceeCCCCC-eeec--CCcccCceeeeEEe
Confidence            999999999999999999 999987533 2221  22223335677765


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=2.7e-47  Score=364.71  Aligned_cols=330  Identities=16%  Similarity=0.129  Sum_probs=228.0

Q ss_pred             CCCC-CCCCCccccccc-----cCCChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhcCCCCCCCCchh-h
Q 009414           69 PIPG-PRGLPFIGSMSL-----MTNLPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILNSSVFADRPVKE-S  141 (535)
Q Consensus        69 ~~Pg-P~~~P~iG~~~~-----~~~~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~-~  141 (535)
                      .||| |.++|++|+...     +..+++.++.+++++    ||+++.   ...++|++++.+++|+.+..|++++... .
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~----pV~~~~---~~~~vv~~~~~v~~vl~d~~f~~~~~~~~~  107 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES----GVRRSR---TETWVVADHATARQVLDDPAFTRATGRTPE  107 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH----CEEECS---SSCEEECSHHHHHHHHHCSSEESSCCCCCH
T ss_pred             CCCcccccccccCCchhhcCchhccCchHHHHHHHhC----CceeCC---CCEEEEcCHHHHHHHHcCCCcCCCcccccc
Confidence            4677 556899997644     446899999999865    686544   3468999999999999976777654311 0


Q ss_pred             h-------hhhhcccceeeCcCChhHHHHHHHhhhccCCHhhhhhchhHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHH
Q 009414          142 A-------YSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDIL-KPAS  213 (535)
Q Consensus       142 ~-------~~~~~g~~~~~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~~~~~~~~lv~~l~~~~~~~vdl~~~~-~~~~  213 (535)
                      .       ... .+.++++ .+|+.|        .+.|+     . ++.+++.++++++.+.    +.+|+...+ ..++
T Consensus       108 ~~~~~~~~~~~-~~~~l~~-~dg~~H--------~~~Ft-----~-~~~i~~~~~~ll~~~~----g~~Dl~~~~a~~l~  167 (381)
T 2yjn_B          108 WMRAAGAPPAE-WAQPFRD-VHAASW--------EGEVP-----D-VGELAESFAGLLPGAG----ARLDLVGDFAWQVP  167 (381)
T ss_dssp             HHHHHTCCHHH-HTHHHHH-HHHCCC--------CSCCC-----C-CSCHHHHTSTTSCC----------CCCCCCTHHH
T ss_pred             cccccccccch-hhhhhhh-CCchhh--------hhccC-----C-hHHHHHHHHHHHHhcc----CcchHHHHHHHHHH
Confidence            0       111 2344444 478888        36787     4 8899999999999885    468988665 7999


Q ss_pred             HHHHHHHHhcccccccCCCCchHHHHHHHHHHHHHHhccccccccccccccccchhHHHHHHHHhhHHHHHHHHHHHHHH
Q 009414          214 LNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLADFDLQKVRLRSSKLVPQVNRFVNRIIQEH  293 (535)
Q Consensus       214 ~~vi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  293 (535)
                      +++|+++ ||.+.+.       .  .+...   .......       +    +.+... ++       ..          
T Consensus       168 ~~vi~~l-~G~~~~~-------~--~~~~~---~~~~~~~-------~----~~~~~~-~~-------~~----------  205 (381)
T 2yjn_B          168 VQGMTAV-LGAAGVL-------R--GAAWD---ARVSLDA-------Q----LSPQQL-AV-------TE----------  205 (381)
T ss_dssp             HHHHHTC------CC-------H--HHHHH---HTTHHHH-------T----TSCCCH-HH-------HH----------
T ss_pred             HHHHHHH-cCCCHHH-------H--HHHHH---HHHhccC-------C----CCHHHH-HH-------HH----------
Confidence            9999995 9987654       1  22221   1110000       0    000000 00       00          


Q ss_pred             HHhhcCCCCCCcHHHHHhccCCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCC
Q 009414          294 RTTQTSLQRNSDFVDVLLSLSGPDRLSDHDIVAVLWEMIFRGTDTVAILIEWILARMVLHPDIQSKVHSELDQVVGRSRP  373 (535)
Q Consensus       294 ~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~aG~~tta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  373 (535)
                                 +.+..+++             +++..+++||+|||+++++|++++|++||++++++++|++        
T Consensus       206 -----------~~~~~l~~-------------~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~--------  253 (381)
T 2yjn_B          206 -----------AAVAALPA-------------DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA--------  253 (381)
T ss_dssp             -----------HHHHHCC---------------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC--------
T ss_pred             -----------HHHHHHHH-------------HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH--------
Confidence                       01111111             5678999999999999999999999999999999999864        


Q ss_pred             CChhhccCCCchhHHHHhhhcCCCCCCcccccccccccceecCeeeCCCCEEEEehhhhhcCCCCCCCCCCCCCCccCCC
Q 009414          374 LTESDLQSMVYLPAVVKEVVRLHPPGPLLSWARLAITDTTVDHYHVPAGTTAMVNIWAIMRDPEIYADPLKFMPERFVNP  453 (535)
Q Consensus       374 ~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  453 (535)
                                |++++|+|+||++|+++..  .|.+.+|++++|+.||||+.|.++.+++|+||++|+||++|||+||++ 
T Consensus       254 ----------~l~~~i~E~LR~~pp~~~~--~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~-  320 (381)
T 2yjn_B          254 ----------AAQRTVAEVLRLHPALHLE--RRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA-  320 (381)
T ss_dssp             ------------HHHHHHHHHHSCSCSEE--EEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC-
T ss_pred             ----------HHHHHhCeeeeecCCCcce--eEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC-
Confidence                      8999999999999999976  799999999999999999999999999999999999999999999963 


Q ss_pred             CCCCccccccCCCCceeccCCCCCCCcchhHHHHHHHHHHHHHhhcc-eeeecCCCCCCccccccccccccCceeEE
Q 009414          454 EAADMDISLMGSDLRLAPFGSGRRTCPGKGLGLATVSFWVGTLLHEF-KWVQSDYDPVDLSEVLRLSCEMKNPLTVR  529 (535)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  529 (535)
                                   ..++|||.| |.|+|++||++|++++++.|+++| ++++.++. ..+  ..+...+....++|+
T Consensus       321 -------------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~-~~~--~~~~~~r~~~~LpV~  380 (381)
T 2yjn_B          321 -------------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGPV-VRR--RRSPVLRGTNRCPVE  380 (381)
T ss_dssp             -------------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----CC-EEC--TTCSSSCCEEECCCC
T ss_pred             -------------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCC-ccc--ccCcccCCCccceee
Confidence                         358999999 999999999999999999999999 99987643 222  233444454555554


No 78 
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.86  E-value=19  Score=25.85  Aligned_cols=51  Identities=10%  Similarity=0.171  Sum_probs=38.3

Q ss_pred             CccccccccCC--ChhHHHHHHHHHhcCcceEEEEeCCeeEEEecCHHHHHHHhc
Q 009414           77 PFIGSMSLMTN--LPHHNLAAAAEAYKAKRVMAFSLGETRVIITCSPDVAKEILN  129 (535)
Q Consensus        77 P~iG~~~~~~~--~~~~~l~~~~~ky~~G~v~~~~~g~~~~vvv~dp~~i~~i~~  129 (535)
                      -++||+..-..  .....+.++-.+|| |+|..+ .||.-+|...|.+.++..++
T Consensus        12 lYV~NL~~~~~~~~lk~~L~~lF~~yG-G~Vl~V-tgG~AfV~F~~~esA~~A~~   64 (96)
T 2diu_A           12 LYVYNLPANKDGKSVSNRLRRLSDNCG-GKVLSI-TGCSAILRFINQDSAERAQK   64 (96)
T ss_dssp             EEEESCCTTSCHHHHHHHHHHHHHTTT-CCEEEC-CTTCEEEEESSHHHHHHHHH
T ss_pred             EEEeCCCCcCCHHHHHHHHHHHHHHcC-CeeEEE-ecCEEEEEECCHHHHHHHHH
Confidence            34788855432  33456888999994 489777 57888999999999988876


No 79 
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=49.09  E-value=48  Score=22.35  Aligned_cols=50  Identities=6%  Similarity=0.017  Sum_probs=36.4

Q ss_pred             ccccccccCCC----hhHHHHHHHHHhcCcceEEEEeC-------CeeEEEecCHHHHHHHhc
Q 009414           78 FIGSMSLMTNL----PHHNLAAAAEAYKAKRVMAFSLG-------ETRVIITCSPDVAKEILN  129 (535)
Q Consensus        78 ~iG~~~~~~~~----~~~~l~~~~~ky~~G~v~~~~~g-------~~~~vvv~dp~~i~~i~~  129 (535)
                      ++||+..-...    ..+.+.++-.+|  |+|..+++.       |.-+|-..+++.++..+.
T Consensus         5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~--G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~   65 (81)
T 2krb_A            5 VVDNVPQVGPDRLEKLKNVIHKIFSKF--GKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVK   65 (81)
T ss_dssp             EEESCCCCCTTTHHHHHHHHHHHHHTT--CCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHT
T ss_pred             EEeCCCCCcHHHHHHHHHHHHHHHhhc--CCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHH
Confidence            46666543322    457788888999  899888875       445777889998888876


No 80 
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=41.30  E-value=47  Score=20.77  Aligned_cols=13  Identities=15%  Similarity=0.667  Sum_probs=6.5

Q ss_pred             HHHHHHHHHHHHh
Q 009414           35 AFFWLAMALCFWA   47 (535)
Q Consensus        35 ~~~~~~~~~~~~~   47 (535)
                      +++++++.+++|.
T Consensus        20 LLLL~Lii~~LwK   32 (54)
T 2l8s_A           20 LLLLMLLILALWK   32 (54)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            3444455555663


No 81 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=38.89  E-value=25  Score=17.12  Aligned_cols=13  Identities=38%  Similarity=0.659  Sum_probs=10.3

Q ss_pred             hHHHHHHHHHHHH
Q 009414          354 PDIQSKVHSELDQ  366 (535)
Q Consensus       354 p~~~~~lr~Ei~~  366 (535)
                      ..+|+++|+|+++
T Consensus         7 tnlqkkirkelkq   19 (26)
T 1m46_B            7 TNLQKKIRKELKQ   19 (26)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            3578999999875


No 82 
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=37.43  E-value=47  Score=20.79  Aligned_cols=13  Identities=15%  Similarity=0.585  Sum_probs=6.5

Q ss_pred             HHHHHHHHHHHHh
Q 009414           35 AFFWLAMALCFWA   47 (535)
Q Consensus        35 ~~~~~~~~~~~~~   47 (535)
                      +++++++.+++|.
T Consensus        23 LllL~li~~~LwK   35 (54)
T 2knc_A           23 LLLLTILVLAMWK   35 (54)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            3444455555663


No 83 
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=34.90  E-value=50  Score=19.66  Aligned_cols=9  Identities=11%  Similarity=0.213  Sum_probs=3.6

Q ss_pred             HHHHHHHHh
Q 009414           39 LAMALCFWA   47 (535)
Q Consensus        39 ~~~~~~~~~   47 (535)
                      +.+.+.+|+
T Consensus        27 ~~l~~~~~~   35 (44)
T 2jwa_A           27 LGVVFGILI   35 (44)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhhe
Confidence            333344443


No 84 
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=29.92  E-value=88  Score=18.39  Aligned_cols=13  Identities=15%  Similarity=0.585  Sum_probs=7.1

Q ss_pred             HHHHHHHHHHHHh
Q 009414           35 AFFWLAMALCFWA   47 (535)
Q Consensus        35 ~~~~~~~~~~~~~   47 (535)
                      +++++++.+++|.
T Consensus        21 LllL~li~~~LwK   33 (42)
T 2k1a_A           21 LLLLTILVLAMWK   33 (42)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            3444555566664


No 85 
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=27.48  E-value=1.5e+02  Score=21.46  Aligned_cols=56  Identities=13%  Similarity=0.181  Sum_probs=39.7

Q ss_pred             CCCCCCCCccccccccCCChhHHHHHHHHHhcCcceEEEEeC------CeeEEEecCHHHHHHHhc
Q 009414           70 IPGPRGLPFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLG------ETRVIITCSPDVAKEILN  129 (535)
Q Consensus        70 ~PgP~~~P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g------~~~~vvv~dp~~i~~i~~  129 (535)
                      ||.|...=++||+..-  -....+.++-.+|  |+|..+++.      |.-+|-..+++.+...+.
T Consensus         4 ~~~~~~~l~V~nlp~~--~t~~~l~~~F~~~--G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~   65 (115)
T 3lqv_A            4 PPEVNRILYIRNLPYK--ITAEEMYDIFGKY--GPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD   65 (115)
T ss_dssp             CTTCCSEEEEESCCTT--CCHHHHHHHHHTT--SCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCC--CCHHHHHHHHHhc--CCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence            4555555577887532  3456688888999  999888872      345777889988888765


No 86 
>3bej_E Nuclear receptor coactivator 1; FXR, BAR, NR1H4, bIle acid receptor, NHR, alternative splicing, DNA-binding, metal-binding nucleus, repressor; HET: MUF; 1.90A {Homo sapiens} PDB: 1fm9_B* 1k74_B* 1fm6_B* 1p8d_C* 1rdt_B* 1nrl_C* 3ipq_B* 3ips_C* 3ipu_C* 4dm6_E* 4dm8_C* 3kmg_B* 2hfp_B* 1k7l_B*
Probab=26.47  E-value=69  Score=16.04  Aligned_cols=21  Identities=29%  Similarity=0.425  Sum_probs=18.5

Q ss_pred             CcchhHHHHHHHHHHHHHhhc
Q 009414          479 CPGKGLGLATVSFWVGTLLHE  499 (535)
Q Consensus       479 C~G~~~A~~e~~~~l~~ll~~  499 (535)
                      ||..+-...|-.-++.+||++
T Consensus         1 cpss~~sL~EkHkILHrLLQ~   21 (26)
T 3bej_E            1 CPSSHSSLTERHKILHRLLQE   21 (26)
T ss_pred             CCCchhhHHHHHHHHHHHHHc
Confidence            888888899999999999985


No 87 
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=25.67  E-value=1.7e+02  Score=20.88  Aligned_cols=52  Identities=6%  Similarity=0.011  Sum_probs=38.0

Q ss_pred             CCccccccccCCC----hhHHHHHHHHHhcCcceEEEEeC-------CeeEEEecCHHHHHHHhc
Q 009414           76 LPFIGSMSLMTNL----PHHNLAAAAEAYKAKRVMAFSLG-------ETRVIITCSPDVAKEILN  129 (535)
Q Consensus        76 ~P~iG~~~~~~~~----~~~~l~~~~~ky~~G~v~~~~~g-------~~~~vvv~dp~~i~~i~~  129 (535)
                      .=++||+..-...    ..+.+.++-.+|  |+|..+++.       |.-+|-..+++.+...+.
T Consensus        17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~--G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~   79 (105)
T 2nlw_A           17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKF--GKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVK   79 (105)
T ss_dssp             EEEEESCCCCCTTTTTHHHHHHHHHHGGG--SCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHH
T ss_pred             EEEEeCCCcchhhhhHHHHHHHHHHHhcC--CCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHH
Confidence            4477888654322    567888999999  899888875       455677788888877765


No 88 
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=22.34  E-value=2.3e+02  Score=21.23  Aligned_cols=52  Identities=12%  Similarity=0.141  Sum_probs=35.8

Q ss_pred             CCccccccccCC--ChhHHHHHHHHHhcCcceEEEEeC------CeeEEEecCHHHHHHHhc
Q 009414           76 LPFIGSMSLMTN--LPHHNLAAAAEAYKAKRVMAFSLG------ETRVIITCSPDVAKEILN  129 (535)
Q Consensus        76 ~P~iG~~~~~~~--~~~~~l~~~~~ky~~G~v~~~~~g------~~~~vvv~dp~~i~~i~~  129 (535)
                      -=++||+..-..  .....+.++-.+|  |+|..+.+.      |.-+|...+++.+.....
T Consensus        31 ~LfV~nL~~~~~e~~L~~~L~~~F~~~--G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~   90 (127)
T 2a3j_A           31 VVLITNINPEVPKEKLQALLYALASSQ--GDILDIVVDLSDDNSGKAYIVFATQESAQAFVE   90 (127)
T ss_dssp             EEEEESCCTTSCHHHHHHHHHHHHHHH--SCEEEEEECCCCSSCCCEEEEESSHHHHHHHHH
T ss_pred             EEEEeCCCCCCCHHHHHHHHHHHhccC--CCeEEEEeccCCCcCCEEEEEECCHHHHHHHHH
Confidence            346677754321  2334466788999  999888773      456788899998888775


No 89 
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=22.27  E-value=1.3e+02  Score=21.32  Aligned_cols=50  Identities=12%  Similarity=0.150  Sum_probs=35.4

Q ss_pred             ccccccccC----CChhHHHHHHHHHhcCcceEEEEeC---------CeeEEEecCHHHHHHHhc
Q 009414           78 FIGSMSLMT----NLPHHNLAAAAEAYKAKRVMAFSLG---------ETRVIITCSPDVAKEILN  129 (535)
Q Consensus        78 ~iG~~~~~~----~~~~~~l~~~~~ky~~G~v~~~~~g---------~~~~vvv~dp~~i~~i~~  129 (535)
                      ++||++...    .-..+.+.++-.+|  |+|..+++.         |.-+|-..+++.++..+.
T Consensus        10 fV~nLp~v~~~~~~~~~~~L~~~F~~~--G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~   72 (100)
T 3ns6_A           10 VVNGAPVIPSAKVPVLKKALTSLFSKA--GKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK   72 (100)
T ss_dssp             EEESCCCCBGGGHHHHHHHHHHHHHTT--SCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred             EEeCCCcCChHHHHHHHHHHHHHHHhc--CCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence            566665432    23456678888889  899988874         345777889988888775


No 90 
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.03  E-value=1.9e+02  Score=20.11  Aligned_cols=51  Identities=14%  Similarity=0.031  Sum_probs=34.2

Q ss_pred             CccccccccCC--ChhHHHHHHHHHhcCcceEEEEeC------CeeEEEecCHHHHHHHhc
Q 009414           77 PFIGSMSLMTN--LPHHNLAAAAEAYKAKRVMAFSLG------ETRVIITCSPDVAKEILN  129 (535)
Q Consensus        77 P~iG~~~~~~~--~~~~~l~~~~~ky~~G~v~~~~~g------~~~~vvv~dp~~i~~i~~  129 (535)
                      =++||+..-..  .....+.++-.+|  |+|..+++.      +.-+|-..+++.++..+.
T Consensus        12 l~V~nL~~~~~~~~l~~~l~~~F~~~--G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~   70 (96)
T 2dgx_A           12 VQVSNIDYRLSRKELQQLLQEAFARH--GKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN   70 (96)
T ss_dssp             EEEESCCTTSCHHHHHHHHHHHHHHH--SCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred             EEEECCCCCCCHHHHHHHHHHhcccc--CcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence            36677754321  2233344888999  899988874      345677788888888765


No 91 
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=20.60  E-value=2.2e+02  Score=20.22  Aligned_cols=49  Identities=10%  Similarity=0.081  Sum_probs=35.5

Q ss_pred             CccccccccCCChhHHHHHHHHHhcCcceEEEEeC---------CeeEEEecCHHHHHHHhc
Q 009414           77 PFIGSMSLMTNLPHHNLAAAAEAYKAKRVMAFSLG---------ETRVIITCSPDVAKEILN  129 (535)
Q Consensus        77 P~iG~~~~~~~~~~~~l~~~~~ky~~G~v~~~~~g---------~~~~vvv~dp~~i~~i~~  129 (535)
                      =++|++..  .-....+.++-++|  |+|..+.+.         +.-+|-..+++.+..++.
T Consensus        29 l~V~nlp~--~~t~~~l~~~F~~~--G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~   86 (110)
T 1oo0_B           29 LFVTSIHE--EAQEDEIQEKFCDY--GEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE   86 (110)
T ss_dssp             EEEESCCT--TCCHHHHHHHHGGG--SCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred             EEEeCCCC--CCCHHHHHHHHHhc--CCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence            35666643  23466688888999  899888874         345777889998888775


Done!