BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009420
(535 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|I1S2N3|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 /
FGSC 9075 / NRRL 31084) GN=GAOA PE=3 SV=1
Length = 680
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 183/450 (40%), Gaps = 58/450 (12%)
Query: 95 VQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCD-WKEIDGLGARRWYATD 153
+ +++C ++ +G ++ TGG ND +K D S D W + R Y +
Sbjct: 263 TKHDMFCPGISMDGNGQIVVTGG-NDAKK-----TSLYDSSSDSWIPGPDMQVARGYQSS 316
Query: 154 HILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFL 213
+ DGR+ IGG ++ + KNG VYS T+ P + N L D
Sbjct: 317 ATMSDGRVFTIGG--SWSGGVFEKNG--EVYSPSSKTWTSLPNAKVN----PMLTADKQG 368
Query: 214 FIFANNRAILFDYVNNKVVKQYPAIP--------GGDPRS----YPSSGSAVLLPLKN-L 260
++N A LF + V + P+ GD +S + G A N +
Sbjct: 369 LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAV 428
Query: 261 LAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGD 320
+ +V ++L GG+P A + L T P + + R
Sbjct: 429 MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG----TSPNTVFASNGLYFARTFHT 484
Query: 321 MTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHST 380
+LP+G+ + G +G + PV P +Y P+ F QNP++I R+YHS
Sbjct: 485 SVVLPDGSTFITGGQRRGIPFED--STPVFTPEIYVPEQ---DTFYKQNPNSIVRVYHSI 539
Query: 381 AVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANL--RPTIVLPESQ 438
++LL DGRV GG G + F+P YL NL RP I +Q
Sbjct: 540 SLLLPDGRVFNGGG------GLCGDCTTNHFDAQIFTPNYLYNSNGNLATRPKITRTSTQ 593
Query: 439 FTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGY 498
K R + S ++ K ++ + TH+ + +QR + L T+T G + Y
Sbjct: 594 -----SVKVGGRITISTDSSITKASLIRYGTA--THTVNTDQRRIPL---TLTNNGGNSY 643
Query: 499 EIVVNSPGSGNLAPSGYYLLFVVHQ-DVPS 527
V P +A GY++LFV++ VPS
Sbjct: 644 SFQV--PSDSGVALPGYWMLFVMNSAGVPS 671
>sp|P0CS93|GAOA_GIBZA Galactose oxidase OS=Gibberella zeae GN=GAOA PE=1 SV=1
Length = 680
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 184/450 (40%), Gaps = 58/450 (12%)
Query: 95 VQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCD-WKEIDGLGARRWYATD 153
+ +++C ++ +G ++ TGG ND +K D S D W + R Y +
Sbjct: 263 TKHDMFCPGISMDGNGQIVVTGG-NDAKK-----TSLYDSSSDSWIPGPDMQVARGYQSS 316
Query: 154 HILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFL 213
+ DGR+ IGG ++ + KNG VYS T+ P + N L D
Sbjct: 317 ATMSDGRVFTIGG--SWSGGVFEKNG--EVYSPSSKTWTSLPNAKVN----PMLTADKQG 368
Query: 214 FIFANNRAILFDYVNNKVVKQYPAIP--------GGDPRS----YPSSGSAVLLPLKN-L 260
++N A LF + V + P+ GD +S + G A N +
Sbjct: 369 LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAV 428
Query: 261 LAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGD 320
+ +V ++L GG+P A + L T P + + R
Sbjct: 429 MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG----TSPNTVFASNGLYFARTFHT 484
Query: 321 MTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHST 380
+LP+G+ + G +G + PV P +Y P+ F QNP++I R+YHS
Sbjct: 485 SVVLPDGSTFITGGQRRGIPFED--STPVFTPEIYVPEQ---DTFYKQNPNSIVRVYHSI 539
Query: 381 AVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANL--RPTIVLPESQ 438
++LL DGRV GG G + F+P YL NL RP I +Q
Sbjct: 540 SLLLPDGRVFNGGG------GLCGDCTTNHFDAQIFTPNYLYNSNGNLATRPKITRTSTQ 593
Query: 439 FTLKYKQKFRVRFSASGPVALNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGY 498
K R + S +++K ++ + TH+ + +QR + L T+T G + Y
Sbjct: 594 -----SVKVGGRITISTDSSISKASLIRYGTA--THTVNTDQRRIPL---TLTNNGGNSY 643
Query: 499 EIVVNSPGSGNLAPSGYYLLFVVHQ-DVPS 527
V P +A GY++LFV++ VPS
Sbjct: 644 SFQV--PSDSGVALPGYWMLFVMNSAGVPS 671
>sp|Q9W5Z5|WSB1_TAKRU WD repeat and SOCS box-containing protein 1 OS=Takifugu rubripes
GN=wsb1 PE=2 SV=1
Length = 427
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 297 RIKITDP-TPTWVLETMPQPRVMGDMTLLPNGNVLLINGA-GKGTAGWELGRDPVLAPVV 354
RIKI D T T +L M ++ D+T P+G+++L++ + K W+L D + V+
Sbjct: 156 RIKIWDVYTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGNMVKVL 215
Query: 355 Y-RPDNIPGSRFDLQNPSTIPRMYHSTAVLL 384
+ P+ + S F + S + + S AVLL
Sbjct: 216 WGHPNRVYSSAFS-PDSSVLCSVGASKAVLL 245
>sp|Q8CG27|ACTL9_MOUSE Actin-like protein 9 OS=Mus musculus GN=Actl9 PE=2 SV=1
Length = 415
Score = 32.7 bits (73), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 236 PAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGA 275
P IPG P P+ LL + L P VA V++CGG+
Sbjct: 304 PEIPGLSPIGLPAMAEQSLLKVPQELRPHVARNVILCGGS 343
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,829,959
Number of Sequences: 539616
Number of extensions: 10214404
Number of successful extensions: 17854
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 17836
Number of HSP's gapped (non-prelim): 15
length of query: 535
length of database: 191,569,459
effective HSP length: 122
effective length of query: 413
effective length of database: 125,736,307
effective search space: 51929094791
effective search space used: 51929094791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)