Query 009420
Match_columns 535
No_of_seqs 399 out of 2110
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 04:47:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009420.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009420hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k3i_A Galactose oxidase precu 100.0 3E-74 1E-78 643.9 40.6 447 22-535 171-655 (656)
2 1zgk_A Kelch-like ECH-associat 100.0 5E-36 1.7E-40 303.5 28.1 279 35-383 11-308 (308)
3 2xn4_A Kelch-like protein 2; s 100.0 1E-35 3.5E-40 299.8 30.2 274 44-389 11-302 (302)
4 3ii7_A Kelch-like protein 7; p 100.0 1.3E-34 4.5E-39 292.2 27.6 266 48-385 11-295 (306)
5 2vpj_A Kelch-like protein 12; 100.0 3.7E-34 1.3E-38 288.0 27.4 268 47-383 13-299 (301)
6 2woz_A Kelch repeat and BTB do 100.0 4.3E-33 1.5E-37 283.0 25.0 274 48-393 15-314 (318)
7 4asc_A Kelch repeat and BTB do 100.0 2.5E-33 8.6E-38 284.4 22.3 279 22-395 18-306 (315)
8 1zgk_A Kelch-like ECH-associat 100.0 7.6E-32 2.6E-36 272.7 29.5 255 101-421 16-288 (308)
9 2uvk_A YJHT; unknown function, 100.0 2.4E-32 8.1E-37 281.7 24.2 294 31-398 2-328 (357)
10 2xn4_A Kelch-like protein 2; s 100.0 1.4E-31 4.9E-36 269.4 27.9 250 108-421 14-277 (302)
11 3ii7_A Kelch-like protein 7; p 100.0 2.6E-31 8.7E-36 268.1 28.0 251 109-422 11-274 (306)
12 4asc_A Kelch repeat and BTB do 100.0 1.7E-31 5.7E-36 270.9 23.1 253 79-421 14-278 (315)
13 2vpj_A Kelch-like protein 12; 100.0 1.4E-30 4.7E-35 261.9 29.4 248 108-421 13-279 (301)
14 2woz_A Kelch repeat and BTB do 100.0 2E-28 6.8E-33 248.6 24.1 266 23-333 30-314 (318)
15 1k3i_A Galactose oxidase precu 100.0 5.1E-29 1.7E-33 278.2 20.7 293 80-420 168-497 (656)
16 2zwa_A Leucine carboxyl methyl 100.0 8.2E-28 2.8E-32 270.0 27.4 269 28-397 378-676 (695)
17 2uvk_A YJHT; unknown function, 100.0 1.5E-27 5.3E-32 245.6 21.0 263 26-372 42-352 (357)
18 2zwa_A Leucine carboxyl methyl 99.9 1.6E-23 5.5E-28 235.1 21.6 238 89-422 378-637 (695)
19 3vgz_A Uncharacterized protein 98.3 0.00036 1.2E-08 69.3 28.3 248 78-395 69-334 (353)
20 3dsm_A Uncharacterized protein 98.1 0.0016 5.4E-08 65.2 27.8 269 78-419 17-301 (328)
21 4ery_A WD repeat-containing pr 98.1 0.0022 7.5E-08 62.8 27.6 261 46-395 32-299 (312)
22 3ow8_A WD repeat-containing pr 98.0 0.0044 1.5E-07 61.6 28.0 246 79-396 59-311 (321)
23 1got_B GT-beta; complex (GTP-b 97.9 0.0031 1.1E-07 63.0 24.8 261 47-396 65-333 (340)
24 1k8k_C P40, ARP2/3 complex 41 97.9 0.0046 1.6E-07 61.5 25.9 151 45-227 16-172 (372)
25 3hfq_A Uncharacterized protein 97.8 0.0028 9.6E-08 63.1 22.3 149 79-232 19-176 (347)
26 3bws_A Protein LP49; two-domai 97.8 0.0039 1.3E-07 63.8 23.3 254 79-395 145-420 (433)
27 3no2_A Uncharacterized protein 97.7 0.0038 1.3E-07 61.1 21.4 205 79-333 16-230 (276)
28 1gxr_A ESG1, transducin-like e 97.7 0.007 2.4E-07 59.0 23.5 260 46-396 60-327 (337)
29 2hes_X YDR267CP; beta-propelle 97.7 0.0047 1.6E-07 61.5 22.0 144 79-232 35-188 (330)
30 2pbi_B Guanine nucleotide-bind 97.7 0.014 4.7E-07 58.8 25.6 265 47-396 74-347 (354)
31 1l0q_A Surface layer protein; 97.7 0.01 3.5E-07 59.7 24.5 244 79-395 13-264 (391)
32 2ynn_A Coatomer subunit beta'; 97.7 0.005 1.7E-07 60.5 21.3 233 47-360 23-260 (304)
33 3zwl_B Eukaryotic translation 97.6 0.013 4.4E-07 57.8 24.0 287 41-396 35-336 (369)
34 3dsm_A Uncharacterized protein 97.6 0.013 4.3E-07 58.5 24.0 153 42-235 47-219 (328)
35 2z2n_A Virginiamycin B lyase; 97.6 0.05 1.7E-06 52.0 29.0 257 43-394 20-284 (299)
36 3no2_A Uncharacterized protein 97.6 0.0044 1.5E-07 60.6 20.1 220 109-394 4-231 (276)
37 3fm0_A Protein CIAO1; WDR39,SG 97.6 0.0078 2.7E-07 60.3 22.3 155 45-232 24-185 (345)
38 1rwi_B Serine/threonine-protei 97.6 0.033 1.1E-06 52.8 25.8 69 40-131 26-95 (270)
39 3vl1_A 26S proteasome regulato 97.6 0.038 1.3E-06 56.0 27.5 88 79-175 120-208 (420)
40 1vyh_C Platelet-activating fac 97.6 0.014 4.7E-07 60.1 24.1 149 47-233 118-270 (410)
41 1gxr_A ESG1, transducin-like e 97.6 0.013 4.3E-07 57.2 22.6 222 104-396 57-286 (337)
42 2qc5_A Streptogramin B lactona 97.6 0.062 2.1E-06 51.4 28.6 261 40-394 22-290 (300)
43 3u4y_A Uncharacterized protein 97.6 0.021 7.2E-07 55.9 24.3 129 79-228 21-160 (331)
44 4aez_A CDC20, WD repeat-contai 97.5 0.013 4.5E-07 59.7 22.7 250 79-396 114-370 (401)
45 3vl1_A 26S proteasome regulato 97.5 0.011 3.9E-07 60.0 21.8 261 79-396 79-355 (420)
46 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.11 3.9E-06 52.0 29.9 261 43-394 98-367 (376)
47 3u4y_A Uncharacterized protein 97.4 0.063 2.2E-06 52.4 25.9 177 23-231 26-210 (331)
48 1got_B GT-beta; complex (GTP-b 97.4 0.037 1.3E-06 55.0 24.4 225 106-396 63-291 (340)
49 4e54_B DNA damage-binding prot 97.4 0.042 1.4E-06 56.7 25.6 147 48-230 131-284 (435)
50 3scy_A Hypothetical bacterial 97.4 0.027 9.4E-07 56.2 23.5 95 79-175 30-125 (361)
51 3jrp_A Fusion protein of prote 97.4 0.0065 2.2E-07 60.4 18.0 104 46-175 20-130 (379)
52 3hfq_A Uncharacterized protein 97.4 0.017 5.8E-07 57.3 21.0 181 23-232 24-224 (347)
53 1ri6_A Putative isomerase YBHE 97.3 0.035 1.2E-06 54.1 22.7 142 79-232 16-165 (343)
54 3dwl_C Actin-related protein 2 97.3 0.001 3.6E-08 66.9 11.6 63 47-131 21-85 (377)
55 2aq5_A Coronin-1A; WD40 repeat 97.2 0.012 4E-07 60.0 18.3 50 79-131 105-162 (402)
56 3mkq_A Coatomer beta'-subunit; 97.2 0.054 1.8E-06 60.3 24.8 233 46-360 22-260 (814)
57 3ei3_B DNA damage-binding prot 97.2 0.059 2E-06 54.0 23.1 147 46-228 82-236 (383)
58 3ow8_A WD repeat-containing pr 97.2 0.14 4.9E-06 50.4 25.5 137 79-233 103-242 (321)
59 3iz6_a 40S ribosomal protein R 97.2 0.099 3.4E-06 52.8 24.7 50 79-131 89-138 (380)
60 2pbi_B Guanine nucleotide-bind 97.2 0.079 2.7E-06 53.1 23.5 228 105-396 71-305 (354)
61 1ri6_A Putative isomerase YBHE 97.2 0.1 3.4E-06 50.8 23.7 139 79-228 61-209 (343)
62 2ymu_A WD-40 repeat protein; u 97.2 0.096 3.3E-06 55.5 25.2 242 79-396 326-570 (577)
63 3odt_A Protein DOA1; ubiquitin 97.1 0.19 6.5E-06 48.0 26.8 110 40-175 20-129 (313)
64 1q7f_A NHL, brain tumor CG1071 97.1 0.17 5.8E-06 48.4 24.7 68 43-131 35-108 (286)
65 4g56_B MGC81050 protein; prote 97.1 0.091 3.1E-06 52.8 23.4 291 24-396 26-333 (357)
66 1pgu_A Actin interacting prote 97.1 0.046 1.6E-06 58.3 22.2 268 43-397 24-319 (615)
67 3jro_A Fusion protein of prote 97.1 0.0057 2E-07 68.5 15.5 103 47-175 19-128 (753)
68 3scy_A Hypothetical bacterial 97.1 0.14 4.6E-06 51.0 24.3 185 23-232 35-246 (361)
69 1erj_A Transcriptional repress 97.1 0.04 1.4E-06 56.1 20.2 63 47-131 133-195 (393)
70 1r5m_A SIR4-interacting protei 97.1 0.042 1.4E-06 55.2 20.2 147 46-230 117-280 (425)
71 4gga_A P55CDC, cell division c 97.1 0.084 2.9E-06 54.0 22.8 133 79-230 126-263 (420)
72 3fm0_A Protein CIAO1; WDR39,SG 97.1 0.0066 2.3E-07 60.8 14.0 60 321-396 156-215 (345)
73 2pm7_B Protein transport prote 97.1 0.11 3.7E-06 50.5 22.5 255 41-371 12-295 (297)
74 2ovr_B FBW7, F-BOX/WD repeat p 97.0 0.18 6.2E-06 51.7 25.3 243 79-397 180-429 (445)
75 1p22_A F-BOX/WD-repeat protein 97.0 0.11 3.9E-06 53.3 23.3 147 47-233 141-290 (435)
76 1nir_A Nitrite reductase; hemo 97.0 0.046 1.6E-06 58.8 20.8 311 27-422 126-460 (543)
77 1nr0_A Actin interacting prote 97.0 0.15 5E-06 55.3 25.1 137 79-232 213-359 (611)
78 2ymu_A WD-40 repeat protein; u 97.0 0.2 6.9E-06 53.0 25.6 243 79-396 285-529 (577)
79 3v7d_B Cell division control p 97.0 0.23 7.9E-06 51.0 25.2 246 79-394 143-410 (464)
80 1l0q_A Surface layer protein; 96.9 0.091 3.1E-06 52.6 21.4 134 79-233 55-194 (391)
81 2dg1_A DRP35, lactonase; beta 96.9 0.26 9E-06 48.1 24.3 98 46-165 53-152 (333)
82 3sfz_A APAF-1, apoptotic pepti 96.9 0.095 3.3E-06 61.5 24.5 263 44-396 968-1239(1249)
83 1r5m_A SIR4-interacting protei 96.9 0.11 3.7E-06 52.2 21.7 102 46-175 54-176 (425)
84 3i2n_A WD repeat-containing pr 96.9 0.087 3E-06 51.6 20.6 143 79-232 45-203 (357)
85 3mmy_A MRNA export factor; mRN 96.8 0.19 6.4E-06 49.2 22.4 108 40-175 41-156 (368)
86 3v7d_B Cell division control p 96.8 0.45 1.5E-05 48.8 26.1 215 79-360 184-422 (464)
87 3sfz_A APAF-1, apoptotic pepti 96.8 0.15 5E-06 60.0 24.8 270 46-397 624-904 (1249)
88 1k8k_C P40, ARP2/3 complex 41 96.8 0.036 1.2E-06 54.9 16.9 29 105-139 15-43 (372)
89 1nr0_A Actin interacting prote 96.8 0.29 9.8E-06 53.0 25.1 146 206-397 197-346 (611)
90 4ggc_A P55CDC, cell division c 96.8 0.22 7.5E-06 47.8 21.9 134 79-230 46-183 (318)
91 2ynn_A Coatomer subunit beta'; 96.7 0.083 2.8E-06 51.5 18.8 222 105-396 20-249 (304)
92 3bws_A Protein LP49; two-domai 96.7 0.16 5.3E-06 51.7 21.6 137 79-235 192-341 (433)
93 3v9f_A Two-component system se 96.7 1.1 3.7E-05 50.0 31.6 253 80-395 385-647 (781)
94 2ojh_A Uncharacterized protein 96.7 0.17 5.9E-06 47.5 20.2 82 78-167 22-104 (297)
95 3fvz_A Peptidyl-glycine alpha- 96.7 0.55 1.9E-05 46.3 28.8 148 79-235 70-234 (329)
96 2ovr_B FBW7, F-BOX/WD repeat p 96.7 0.43 1.5E-05 48.8 24.6 253 45-396 125-381 (445)
97 2xbg_A YCF48-like protein; pho 96.7 0.59 2E-05 46.4 24.9 238 88-395 25-269 (327)
98 2pm9_A Protein WEB1, protein t 96.7 0.26 8.7E-06 49.5 22.4 62 47-131 77-144 (416)
99 2z2n_A Virginiamycin B lyase; 96.6 0.48 1.6E-05 45.0 26.8 148 46-232 65-216 (299)
100 4h5i_A Guanine nucleotide-exch 96.6 0.46 1.6E-05 47.7 23.9 280 45-396 22-333 (365)
101 3dm0_A Maltose-binding peripla 96.6 0.15 5.1E-06 56.0 21.8 50 79-131 453-502 (694)
102 4gqb_B Methylosome protein 50; 96.6 0.14 4.9E-06 51.2 19.9 50 79-131 104-157 (344)
103 3frx_A Guanine nucleotide-bind 96.6 0.15 5.2E-06 50.0 19.7 50 79-131 88-137 (319)
104 1sq9_A Antiviral protein SKI8; 96.6 0.38 1.3E-05 47.9 23.1 145 79-235 37-223 (397)
105 4a2l_A BT_4663, two-component 96.6 1.3 4.6E-05 49.4 34.2 255 80-395 379-650 (795)
106 3vgz_A Uncharacterized protein 96.6 0.45 1.5E-05 46.4 23.0 106 122-235 68-180 (353)
107 3iz6_a 40S ribosomal protein R 96.6 0.73 2.5E-05 46.3 26.4 200 106-360 165-376 (380)
108 3lrv_A PRE-mRNA-splicing facto 96.6 0.22 7.4E-06 49.2 20.6 58 105-168 132-191 (343)
109 4aez_A CDC20, WD repeat-contai 96.5 0.79 2.7E-05 46.2 26.2 215 79-360 157-381 (401)
110 3bg1_A Protein SEC13 homolog; 96.5 0.12 4.1E-06 50.7 18.0 109 41-175 16-132 (316)
111 3q7m_A Lipoprotein YFGL, BAMB; 96.5 0.8 2.7E-05 45.7 26.7 263 43-394 48-326 (376)
112 2xbg_A YCF48-like protein; pho 96.4 0.9 3.1E-05 45.0 26.9 281 22-395 20-312 (327)
113 3mkq_A Coatomer beta'-subunit; 96.4 1.3 4.5E-05 48.9 27.6 152 46-233 64-222 (814)
114 3k26_A Polycomb protein EED; W 96.3 0.64 2.2E-05 45.3 22.4 101 49-175 85-188 (366)
115 2pm7_B Protein transport prote 96.3 0.33 1.1E-05 47.0 19.7 110 105-229 16-133 (297)
116 3zwl_B Eukaryotic translation 96.2 0.18 6.2E-06 49.3 17.7 229 104-398 38-282 (369)
117 1vyh_C Platelet-activating fac 96.2 0.41 1.4E-05 48.8 20.8 112 104-233 114-228 (410)
118 2pm9_A Protein WEB1, protein t 96.1 0.18 6.1E-06 50.7 17.5 119 103-235 170-301 (416)
119 2xzm_R RACK1; ribosome, transl 96.1 1.1 3.9E-05 44.0 23.1 50 79-131 99-148 (343)
120 4a11_B DNA excision repair pro 96.1 0.19 6.5E-06 50.1 17.4 64 46-131 52-130 (408)
121 1nir_A Nitrite reductase; hemo 96.1 2 6.8E-05 45.8 29.0 279 79-421 201-515 (543)
122 4ery_A WD repeat-containing pr 96.0 1.2 4E-05 42.9 29.5 137 79-233 88-228 (312)
123 3jrp_A Fusion protein of prote 96.0 0.078 2.7E-06 52.3 13.7 57 326-396 171-230 (379)
124 3k26_A Polycomb protein EED; W 95.9 0.29 9.9E-06 47.8 17.4 135 79-230 45-194 (366)
125 3mbr_X Glutamine cyclotransfer 95.8 0.8 2.7E-05 43.7 19.3 62 98-165 20-81 (243)
126 4aow_A Guanine nucleotide-bind 95.8 1.3 4.5E-05 42.6 21.7 16 381-396 312-327 (340)
127 1yfq_A Cell cycle arrest prote 95.8 1.4 4.9E-05 42.4 27.2 102 46-175 20-127 (342)
128 3nol_A Glutamine cyclotransfer 95.8 0.37 1.3E-05 46.6 16.8 61 98-164 42-102 (262)
129 1sq9_A Antiviral protein SKI8; 95.8 1 3.4E-05 44.7 21.0 158 50-235 82-274 (397)
130 3dwl_C Actin-related protein 2 95.7 0.059 2E-06 53.7 11.5 59 104-168 17-76 (377)
131 4e54_B DNA damage-binding prot 95.7 1.1 3.9E-05 45.7 21.6 134 79-230 188-329 (435)
132 3dw8_B Serine/threonine-protei 95.7 1.8 6.3E-05 43.6 22.8 71 152-230 182-260 (447)
133 1pby_B Quinohemoprotein amine 95.6 1.7 6E-05 41.6 25.0 139 79-235 12-170 (337)
134 2hqs_A Protein TOLB; TOLB, PAL 95.5 1.3 4.5E-05 45.2 21.3 59 78-140 159-217 (415)
135 3dm0_A Maltose-binding peripla 95.5 1.5 5.1E-05 47.9 22.7 50 79-131 406-460 (694)
136 1pgu_A Actin interacting prote 95.4 0.86 2.9E-05 48.2 20.1 133 211-396 456-604 (615)
137 3bg1_A Protein SEC13 homolog; 95.4 0.41 1.4E-05 46.7 16.2 112 106-232 21-141 (316)
138 4d9s_A UVB-resistance protein 95.3 0.52 1.8E-05 48.4 17.3 72 318-398 287-359 (406)
139 4g56_B MGC81050 protein; prote 95.3 0.82 2.8E-05 45.6 18.1 50 79-131 162-212 (357)
140 3f3f_A Nucleoporin SEH1; struc 95.1 1.7 5.9E-05 41.4 19.6 69 41-131 14-89 (351)
141 1q7f_A NHL, brain tumor CG1071 95.1 0.86 3E-05 43.3 17.2 131 79-228 143-280 (286)
142 4gga_A P55CDC, cell division c 95.1 3.3 0.00011 41.9 24.3 206 79-336 170-385 (420)
143 2iwa_A Glutamine cyclotransfer 95.1 0.81 2.8E-05 44.3 16.6 34 100-137 22-55 (266)
144 3mbr_X Glutamine cyclotransfer 95.0 1.6 5.6E-05 41.6 18.4 163 38-235 20-186 (243)
145 3i2n_A WD repeat-containing pr 95.0 0.57 1.9E-05 45.6 15.8 114 105-230 25-150 (357)
146 1erj_A Transcriptional repress 95.0 1.6 5.5E-05 43.9 19.6 138 207-396 131-277 (393)
147 3odt_A Protein DOA1; ubiquitin 94.9 1.5 5.2E-05 41.5 18.3 60 108-175 27-86 (313)
148 1p22_A F-BOX/WD-repeat protein 94.8 3.3 0.00011 42.0 21.7 133 79-233 194-330 (435)
149 3e5z_A Putative gluconolactona 94.8 2.3 7.7E-05 40.6 19.3 137 79-231 91-249 (296)
150 1jmx_B Amine dehydrogenase; ox 94.7 1.4 4.6E-05 42.7 17.7 63 106-175 7-70 (349)
151 4a11_B DNA excision repair pro 94.7 0.43 1.5E-05 47.4 14.1 47 82-131 27-74 (408)
152 1rwi_B Serine/threonine-protei 94.6 1.1 3.9E-05 41.8 16.2 132 79-231 88-225 (270)
153 1jof_A Carboxy-CIS,CIS-muconat 94.4 2.6 8.9E-05 41.8 19.3 48 80-131 18-68 (365)
154 1jmx_B Amine dehydrogenase; ox 94.4 0.85 2.9E-05 44.2 15.4 154 47-235 9-182 (349)
155 1pjx_A Dfpase, DIISOPROPYLFLUO 94.3 3.7 0.00013 39.0 20.8 63 105-175 24-97 (314)
156 3jro_A Fusion protein of prote 94.3 0.22 7.5E-06 55.6 11.9 57 326-396 169-228 (753)
157 3lrv_A PRE-mRNA-splicing facto 94.3 1.4 4.7E-05 43.3 16.7 152 48-232 138-298 (343)
158 3ei3_B DNA damage-binding prot 94.2 4.6 0.00016 39.8 23.7 115 103-231 78-197 (383)
159 3gre_A Serine/threonine-protei 94.0 0.75 2.6E-05 46.7 14.5 69 103-175 68-138 (437)
160 3fvz_A Peptidyl-glycine alpha- 93.8 5.3 0.00018 38.9 28.6 246 103-396 28-312 (329)
161 3hrp_A Uncharacterized protein 93.7 6.9 0.00024 39.9 26.6 68 42-131 135-202 (409)
162 2ecf_A Dipeptidyl peptidase IV 93.6 10 0.00034 41.3 25.1 103 41-166 40-170 (741)
163 2bkl_A Prolyl endopeptidase; m 93.5 5.4 0.00018 43.6 21.2 164 45-235 128-314 (695)
164 4h5i_A Guanine nucleotide-exch 93.4 3.7 0.00013 40.9 18.3 167 79-276 158-333 (365)
165 3nol_A Glutamine cyclotransfer 93.4 2.4 8.3E-05 40.8 15.8 176 24-235 26-208 (262)
166 2qc5_A Streptogramin B lactona 93.3 5.4 0.00019 37.4 27.2 133 79-232 84-221 (300)
167 1pjx_A Dfpase, DIISOPROPYLFLUO 93.2 5.8 0.0002 37.6 22.2 81 79-167 47-136 (314)
168 4gqb_B Methylosome protein 50; 93.2 2.2 7.4E-05 42.4 15.9 137 79-232 150-293 (344)
169 3vu4_A KMHSV2; beta-propeller 93.0 5.6 0.00019 39.2 18.8 58 321-396 201-261 (355)
170 2xzm_R RACK1; ribosome, transl 93.0 7.1 0.00024 38.0 21.3 94 48-168 38-139 (343)
171 2aq5_A Coronin-1A; WD40 repeat 93.0 1.7 5.8E-05 43.6 15.0 139 79-230 155-301 (402)
172 2hes_X YDR267CP; beta-propelle 92.9 1.4 4.7E-05 43.2 13.8 98 266-396 118-220 (330)
173 2hqs_A Protein TOLB; TOLB, PAL 92.7 4.7 0.00016 41.0 18.0 154 46-232 187-348 (415)
174 2p4o_A Hypothetical protein; p 92.7 7.6 0.00026 37.4 22.6 79 41-144 35-113 (306)
175 3nok_A Glutaminyl cyclase; bet 92.6 4.3 0.00015 39.2 16.3 157 41-235 57-217 (268)
176 3e5z_A Putative gluconolactona 92.6 7.2 0.00025 37.0 25.2 111 26-164 17-131 (296)
177 2iwa_A Glutamine cyclotransfer 92.4 6.2 0.00021 38.0 17.3 159 42-235 24-188 (266)
178 3nok_A Glutaminyl cyclase; bet 91.8 9.6 0.00033 36.7 20.0 68 156-236 62-133 (268)
179 2xyi_A Probable histone-bindin 91.8 5.9 0.0002 40.1 17.5 50 79-131 152-212 (430)
180 2vdu_B TRNA (guanine-N(7)-)-me 91.3 8.2 0.00028 39.3 18.0 90 79-175 221-335 (450)
181 4aow_A Guanine nucleotide-bind 91.1 3.1 0.00011 39.9 13.8 139 79-230 196-339 (340)
182 2ecf_A Dipeptidyl peptidase IV 91.0 8 0.00027 42.1 18.6 115 105-233 43-186 (741)
183 1yfq_A Cell cycle arrest prote 90.6 12 0.00041 35.7 19.5 63 46-131 65-130 (342)
184 3g4e_A Regucalcin; six bladed 90.5 5.9 0.0002 37.9 15.2 145 79-235 74-236 (297)
185 3mmy_A MRNA export factor; mRN 90.5 4.2 0.00014 39.2 14.2 110 104-230 45-162 (368)
186 3sjl_D Methylamine dehydrogena 90.3 15 0.00052 37.3 18.5 52 78-131 109-168 (386)
187 1qks_A Cytochrome CD1 nitrite 90.0 10 0.00036 40.5 17.9 48 79-131 178-226 (567)
188 3v9f_A Two-component system se 89.3 26 0.00088 38.6 21.1 135 80-232 471-615 (781)
189 2dg1_A DRP35, lactonase; beta 89.2 16 0.00054 35.0 19.0 142 79-230 113-265 (333)
190 2fp8_A Strictosidine synthase; 88.7 18 0.0006 34.9 20.0 80 79-165 41-144 (322)
191 1pby_B Quinohemoprotein amine 88.3 14 0.00048 35.0 16.0 111 111-235 2-131 (337)
192 3vu4_A KMHSV2; beta-propeller 87.3 6.1 0.00021 38.9 13.0 106 47-175 205-332 (355)
193 3o4h_A Acylamino-acid-releasin 87.1 24 0.00081 37.1 18.3 82 294-395 176-265 (582)
194 3dr2_A Exported gluconolactona 87.1 21 0.00072 34.0 16.9 139 79-232 108-271 (305)
195 4ggc_A P55CDC, cell division c 87.1 20 0.00067 33.6 22.1 87 79-175 90-177 (318)
196 3g4e_A Regucalcin; six bladed 87.0 21 0.00073 33.9 19.8 75 79-164 36-114 (297)
197 2p9w_A MAL S 1 allergenic prot 85.5 15 0.00053 36.4 14.5 171 200-395 12-204 (334)
198 2vdu_B TRNA (guanine-N(7)-)-me 85.4 33 0.0011 34.6 25.2 139 79-235 126-278 (450)
199 3pe7_A Oligogalacturonate lyas 85.2 29 0.00099 33.8 20.2 97 45-163 43-140 (388)
200 3frx_A Guanine nucleotide-bind 84.6 8.1 0.00028 37.3 12.1 82 79-168 177-258 (319)
201 1tl2_A L10, protein (tachylect 83.8 5.9 0.0002 37.3 9.8 103 103-217 92-199 (236)
202 2oaj_A Protein SNI1; WD40 repe 81.5 75 0.0026 35.8 20.1 62 46-131 26-87 (902)
203 3hxj_A Pyrrolo-quinoline quino 79.9 41 0.0014 31.7 19.6 122 80-227 42-165 (330)
204 2ojh_A Uncharacterized protein 79.5 37 0.0013 30.9 19.1 106 44-175 48-156 (297)
205 3hrp_A Uncharacterized protein 76.0 69 0.0023 32.2 18.1 32 202-233 132-166 (409)
206 4d9s_A UVB-resistance protein 75.3 25 0.00084 35.6 12.5 18 149-166 234-251 (406)
207 4a2l_A BT_4663, two-component 74.9 1E+02 0.0036 33.7 19.6 133 80-232 473-618 (795)
208 2z3z_A Dipeptidyl aminopeptida 73.4 1E+02 0.0035 32.9 25.9 88 78-168 141-278 (706)
209 2j04_A TAU60, YPL007P, hypothe 73.2 37 0.0013 36.4 13.4 145 47-231 95-257 (588)
210 3f3f_A Nucleoporin SEH1; struc 72.0 9.9 0.00034 35.9 8.1 102 266-397 22-134 (351)
211 3ott_A Two-component system se 71.9 1.2E+02 0.004 33.1 22.9 132 209-395 481-617 (758)
212 3a72_A EXO-arabinanase; arabin 71.4 21 0.00073 35.7 10.6 171 199-392 22-221 (355)
213 3tc9_A Hypothetical hydrolase; 70.8 37 0.0013 34.6 12.6 131 210-395 149-290 (430)
214 2xdw_A Prolyl endopeptidase; a 69.9 1.2E+02 0.0043 32.5 23.8 106 44-167 131-252 (710)
215 3gre_A Serine/threonine-protei 68.9 11 0.00037 37.8 7.9 63 47-131 180-244 (437)
216 3azo_A Aminopeptidase; POP fam 68.7 31 0.001 36.8 11.9 92 78-175 217-319 (662)
217 3ott_A Two-component system se 68.4 1.4E+02 0.0047 32.5 17.8 139 47-228 481-626 (758)
218 3dw8_B Serine/threonine-protei 66.5 1E+02 0.0035 30.2 23.4 146 79-232 199-377 (447)
219 3azo_A Aminopeptidase; POP fam 65.6 58 0.002 34.6 13.3 90 79-175 266-363 (662)
220 3kci_A Probable E3 ubiquitin-p 65.5 19 0.00066 36.1 8.9 155 42-220 118-293 (389)
221 3o4h_A Acylamino-acid-releasin 65.0 7.4 0.00025 41.1 5.9 107 46-175 158-272 (582)
222 1w8o_A Bacterial sialidase; 3D 61.9 20 0.00069 38.3 8.7 131 359-520 305-438 (601)
223 2z3z_A Dipeptidyl aminopeptida 60.7 1.8E+02 0.006 31.0 27.4 81 79-167 102-200 (706)
224 3c5m_A Oligogalacturonate lyas 60.5 54 0.0019 31.6 11.1 57 79-141 265-335 (396)
225 3c5m_A Oligogalacturonate lyas 60.1 32 0.0011 33.4 9.3 82 79-167 217-302 (396)
226 1yr2_A Prolyl oligopeptidase; 59.9 1.9E+02 0.0066 31.2 21.3 161 46-235 171-359 (741)
227 4gq1_A NUP37; propeller, trans 59.4 1.4E+02 0.0047 29.3 15.7 62 48-131 155-217 (393)
228 2ghs_A AGR_C_1268P; regucalcin 56.9 69 0.0024 30.7 11.0 75 79-164 72-150 (326)
229 1kv9_A Type II quinohemoprotei 55.0 2.3E+02 0.0078 30.5 24.6 95 45-164 63-168 (668)
230 1k32_A Tricorn protease; prote 53.5 68 0.0023 36.6 11.8 84 79-167 401-491 (1045)
231 1npe_A Nidogen, entactin; glyc 51.1 1.5E+02 0.005 27.1 20.5 138 79-236 102-246 (267)
232 4hw6_A Hypothetical protein, I 51.1 1.3E+02 0.0043 30.6 12.3 133 210-395 152-293 (433)
233 2w18_A PALB2, fancn, partner a 50.6 1.4E+02 0.0049 29.7 12.1 135 79-226 204-355 (356)
234 1tl2_A L10, protein (tachylect 50.0 41 0.0014 31.5 7.4 102 106-219 48-154 (236)
235 1jof_A Carboxy-CIS,CIS-muconat 46.1 1.1E+02 0.0037 29.6 10.6 49 79-129 168-221 (365)
236 3tc9_A Hypothetical hydrolase; 46.1 94 0.0032 31.5 10.4 116 25-165 167-288 (430)
237 2ghs_A AGR_C_1268P; regucalcin 44.5 2.1E+02 0.0073 27.1 15.1 27 207-233 97-123 (326)
238 1flg_A Protein (quinoprotein e 44.4 1.5E+02 0.0052 31.4 12.1 28 207-234 65-95 (582)
239 2j04_A TAU60, YPL007P, hypothe 43.8 1.6E+02 0.0055 31.5 11.8 105 40-176 131-251 (588)
240 2xyi_A Probable histone-bindin 43.6 69 0.0024 32.0 8.8 89 79-175 255-349 (430)
241 2ism_A Putative oxidoreductase 43.5 1.5E+02 0.0051 28.9 11.1 116 26-167 20-154 (352)
242 1kv9_A Type II quinohemoprotei 43.0 48 0.0016 36.0 7.9 97 266-395 66-171 (668)
243 2fp8_A Strictosidine synthase; 42.3 1.2E+02 0.004 28.8 9.9 79 80-164 103-202 (322)
244 1yiq_A Quinohemoprotein alcoho 41.3 59 0.002 35.4 8.3 96 266-394 70-175 (689)
245 3mvd_K Regulator of chromosome 40.7 45 0.0015 33.6 6.9 19 149-167 355-373 (423)
246 2p4o_A Hypothetical protein; p 38.9 1.2E+02 0.0042 28.5 9.4 81 79-166 190-277 (306)
247 4hw6_A Hypothetical protein, I 38.4 1.8E+02 0.0061 29.5 11.0 59 100-164 229-290 (433)
248 2oaj_A Protein SNI1; WD40 repe 38.3 4.1E+02 0.014 29.6 15.0 144 79-232 80-246 (902)
249 2oiz_A Aromatic amine dehydrog 38.3 56 0.0019 32.1 6.9 74 78-160 286-360 (361)
250 3mvd_K Regulator of chromosome 37.7 96 0.0033 31.1 8.8 73 318-398 304-376 (423)
251 3pe7_A Oligogalacturonate lyas 37.1 92 0.0032 30.0 8.4 85 79-166 265-369 (388)
252 1k32_A Tricorn protease; prote 37.0 1.9E+02 0.0066 32.7 12.1 82 79-168 359-441 (1045)
253 2ad6_A Methanol dehydrogenase 36.5 82 0.0028 33.4 8.3 96 266-394 62-168 (571)
254 2jkb_A Sialidase B; intramolec 36.2 3.2E+02 0.011 29.7 13.1 39 355-393 617-657 (686)
255 3of7_A Regulator of chromosome 36.0 83 0.0029 32.3 8.1 18 149-166 386-403 (473)
256 1kb0_A Quinohemoprotein alcoho 35.4 69 0.0024 34.8 7.6 97 266-395 77-183 (677)
257 2p9w_A MAL S 1 allergenic prot 34.7 3.4E+02 0.011 26.7 11.7 88 78-167 100-204 (334)
258 1w8o_A Bacterial sialidase; 3D 33.4 1.4E+02 0.0049 31.4 9.7 124 88-218 200-340 (601)
259 1xfd_A DIP, dipeptidyl aminope 32.4 4.7E+02 0.016 27.5 29.7 109 43-168 66-193 (723)
260 2xdw_A Prolyl endopeptidase; a 32.2 4.9E+02 0.017 27.7 22.5 84 80-168 100-191 (710)
261 2hz6_A Endoplasmic reticulum t 30.5 37 0.0013 33.6 4.1 53 79-139 20-74 (369)
262 1n7d_A LDL receptor, low-densi 30.1 5.5E+02 0.019 27.7 16.7 102 108-229 463-572 (699)
263 3das_A Putative oxidoreductase 30.0 4.1E+02 0.014 26.1 11.8 119 28-167 23-159 (347)
264 3qhy_B Beta-lactamase inhibito 29.8 54 0.0018 31.3 5.0 95 41-167 34-128 (282)
265 3qhy_B Beta-lactamase inhibito 28.8 66 0.0022 30.7 5.4 51 108-168 196-246 (282)
266 3p5b_L Low density lipoprotein 28.8 4.3E+02 0.015 26.0 20.9 102 109-229 170-278 (400)
267 1cru_A Protein (soluble quinop 27.9 2.6E+02 0.009 28.5 10.2 120 28-168 18-164 (454)
268 2ad6_A Methanol dehydrogenase 27.8 1.6E+02 0.0054 31.1 8.7 78 78-164 444-523 (571)
269 1yiq_A Quinohemoprotein alcoho 27.7 5.9E+02 0.02 27.3 23.6 95 45-164 67-173 (689)
270 2hz6_A Endoplasmic reticulum t 27.5 31 0.0011 34.2 2.9 55 294-366 20-74 (369)
271 3m0c_C LDL receptor, low-densi 27.0 6.7E+02 0.023 27.6 20.3 103 109-230 482-591 (791)
272 1ijq_A LDL receptor, low-densi 26.6 4.1E+02 0.014 25.0 16.8 177 14-229 4-196 (316)
273 4fj6_A Glycoside hydrolase fam 26.1 5.8E+02 0.02 26.6 15.1 157 41-217 328-503 (523)
274 3a9g_A Putative uncharacterize 26.0 2.8E+02 0.0095 27.0 9.7 114 28-167 20-154 (354)
275 2vov_A MOPE, surface-associate 24.5 78 0.0027 28.4 4.5 32 497-534 279-331 (336)
276 1flg_A Protein (quinoprotein e 24.2 2E+02 0.0069 30.4 8.7 78 78-164 466-545 (582)
277 2qe8_A Uncharacterized protein 24.2 1.3E+02 0.0045 28.9 6.8 58 321-396 253-311 (343)
278 1w6s_A Methanol dehydrogenase 24.0 1.7E+02 0.006 31.1 8.2 97 266-394 62-174 (599)
279 1qks_A Cytochrome CD1 nitrite 23.7 6.4E+02 0.022 26.3 22.5 174 202-421 343-539 (567)
280 2w18_A PALB2, fancn, partner a 23.6 1.5E+02 0.0051 29.6 7.0 49 79-130 306-355 (356)
281 1w6s_A Methanol dehydrogenase 22.7 2.1E+02 0.0071 30.6 8.5 78 78-164 453-532 (599)
282 3hxj_A Pyrrolo-quinoline quino 21.8 4.6E+02 0.016 24.0 22.9 127 79-230 118-246 (330)
283 2oit_A Nucleoporin 214KDA; NH2 21.0 98 0.0033 31.3 5.3 50 79-131 173-222 (434)
284 2cn3_A Xyloglucanase, beta-1,4 20.3 8.3E+02 0.028 26.3 28.5 87 302-395 229-322 (737)
No 1
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=3e-74 Score=643.95 Aligned_cols=447 Identities=23% Similarity=0.351 Sum_probs=349.1
Q ss_pred cccCCCceEEcccCCCcceeEEEEee-CCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc---c
Q 009420 22 TDAAGGGWQLLQKSIGISSMHMQLLN-NDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ---S 97 (535)
Q Consensus 22 ~~~~~g~W~~l~~~~~~~~~~~~~~~-~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~---~ 97 (535)
-++..++|+.+.+++. +..|+++++ +||||++||.+.. ... + .......+.+|||.+++|++++.+ +
T Consensus 171 ~dp~~~~W~~~~~~P~-~~~~~av~~~~g~l~v~GG~~~~--~~~---~---~~~~~~~~~~yd~~t~~w~~~~~~~~~~ 241 (656)
T 1k3i_A 171 PQPGLGRWGPTIDLPI-VPAAAAIEPTSGRVLMWSSYRND--AFG---G---SPGGITLTSSWDPSTGIVSDRTVTVTKH 241 (656)
T ss_dssp CCTTSCEEEEEEECSS-CCSEEEEETTTTEEEEEEECCCT--TTC---S---CCCSEEEEEEECTTTCCBCCCEEEECSC
T ss_pred CCCCCCeeeeeccCCC-CceeEEEEecCCEEEEEeccccc--ccc---c---CCCCeEEEEEEeCCCCcEEeCcccCCCC
Confidence 4678899999988764 566777777 9999999997521 110 0 000234689999999999998754 5
Q ss_pred ccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCc-cC----Cee
Q 009420 98 NVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGR-RQ----FNY 172 (535)
Q Consensus 98 ~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~-~~----~~~ 172 (535)
..+|++++++.||+||++||... .++++|||. +++|+++++|+.+||+|+++++.||+|||+||. +. .++
T Consensus 242 ~~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~---t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~ 316 (656)
T 1k3i_A 242 DMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSS---SDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNG 316 (656)
T ss_dssp CCSSCEEEECTTSCEEEECSSST--TCEEEEEGG---GTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCE
T ss_pred CCccccccCCCCCCEEEeCCCCC--CceEEecCc---CCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccc
Confidence 67888888888999999999754 479999999 899999999999999999999989999999995 32 468
Q ss_pred EEE-eCCCCCCeeeec------cccccCCccccCCCcceEEEeeCCcEEEEec-----------CeEEEEECCCCeEEEe
Q 009420 173 EFY-PKNGAPNVYSLP------FLVQTNDPRVENNLYPFVFLNVDGFLFIFAN-----------NRAILFDYVNNKVVKQ 234 (535)
Q Consensus 173 E~y-P~~~~~~w~~~~------~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-----------~~~~~yDp~t~~W~~~ 234 (535)
|+| |.++ +|..++ ++... . +..+..+++||++|+ ..+++||+++++|...
T Consensus 317 e~yd~~t~--~W~~~~~~~~~p~~~~~---------~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~ 384 (656)
T 1k3i_A 317 EVYSPSSK--TWTSLPNAKVNPMLTAD---------K-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKS 384 (656)
T ss_dssp EEEETTTT--EEEEETTSCSGGGCCCC---------T-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEE
T ss_pred eEeCCCCC--cceeCCCcccccccccc---------c-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeec
Confidence 999 7764 787642 22110 0 112235788888875 3478999999999853
Q ss_pred cCCCCCCC-CCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCC---ceEEEEecCCCCCeeee
Q 009420 235 YPAIPGGD-PRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALN---TCARIKITDPTPTWVLE 310 (535)
Q Consensus 235 ~p~~p~~~-~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~---s~e~~d~~~~~~~W~~~ 310 (535)
....+... ....+..++++|++. .+++||++||.+.... ..+++ ++++||+.. ++|+..
T Consensus 385 ~~~~~~~~~~~~~~~~~~av~~~~-------~~~~i~v~GG~~~~~~--------~~~~~~~~~v~~yd~~~--~~W~~~ 447 (656)
T 1k3i_A 385 AGKRQSNRGVAPDAMCGNAVMYDA-------VKGKILTFGGSPDYQD--------SDATTNAHIITLGEPGT--SPNTVF 447 (656)
T ss_dssp EEECEETTEECCCCBTCEEEEEET-------TTTEEEEECCBSSSSS--------SBCCCCEEEEECCSTTS--CCEEEE
T ss_pred CCccccccccCCCCCCCceEeccC-------CCCeEEEEeCCCCCCC--------CCcCCcceEEEcCCCCC--CCeeEE
Confidence 32111100 000123467777663 4899999999742110 02344 566777764 789874
Q ss_pred ---cCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCC
Q 009420 311 ---TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDG 387 (535)
Q Consensus 311 ---~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG 387 (535)
+|+.+|.++++++++||+|||+||...+. +|. +.+++.++|+|||+++ +|+.+++|+.+|.+|+++++++||
T Consensus 448 ~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~---~W~~~~~~~~~R~~hs~a~ll~dg 522 (656)
T 1k3i_A 448 ASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSISLLLPDG 522 (656)
T ss_dssp CTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGT---EEEECCCCSSCCCTTEEEEECTTS
T ss_pred ccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCC---ceeecCCCCCccccccHhhcCCCc
Confidence 89999999999999999999999976432 222 3456778999999999 999999999999999999999999
Q ss_pred cEEEecCCCCccccccCCCCCceeeEEEEcCCCCCCC--CCCCCCceec-CCCccccccCCeEEEEEEecCccccceEEE
Q 009420 388 RVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAP--FANLRPTIVL-PESQFTLKYKQKFRVRFSASGPVALNKVTV 464 (535)
Q Consensus 388 ~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppyl~~~--~~~~RP~i~~-~p~~~~~~~g~~~~v~~~~~~~~~~~~~~~ 464 (535)
+|||+||+.+..+. ++++++|+|+||||+++ ..+.||+|++ +|++ +.||++|+|+++. .+.+|
T Consensus 523 ~v~v~GG~~~~~~~------~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~~~~--~~~g~~~~~~~~~------~~~~~ 588 (656)
T 1k3i_A 523 RVFNGGGGLCGDCT------TNHFDAQIFTPNYLYNSNGNLATRPKITRTSTQS--VKVGGRITISTDS------SISKA 588 (656)
T ss_dssp CEEEEECCCCTTCS------CCCCEEEEEECGGGBCTTSSBCCCCCEEEESCSE--EETTCEEEEEESS------CCSEE
T ss_pred EEEecCCCCCCCCC------CCeeEEEEEeChhhccCCCCcCCCCcccccCCce--ecCCCEEEEEEec------cceEE
Confidence 99999998776432 35889999999999863 5567999999 5888 9999999999862 35689
Q ss_pred EEEecCCccccCCCCcceEEeeeeeeeecCCcceEEEEEcCCCCCcCCCcceEEEEEc-CCcCCccEEEEeC
Q 009420 465 TMVAPSFNTHSFSMNQRLLVLASDTVTKLGNSGYEIVVNSPGSGNLAPSGYYLLFVVH-QDVPSEGIWVHVQ 535 (535)
Q Consensus 465 ~l~~~~~~TH~~~~~qR~v~L~~~~~~~~g~~~~~~~~~~P~~~~~~ppG~ymlf~~~-~gvPS~a~~v~i~ 535 (535)
+|+|++|+||++||+||+|+|+++. .| .++++|++|||++|||||||||||++ +||||+|+||+|+
T Consensus 589 ~l~~~~~~th~~~~~qr~~~l~~~~---~~--~~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps~~~~v~~~ 655 (656)
T 1k3i_A 589 SLIRYGTATHTVNTDQRRIPLTLTN---NG--GNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRVT 655 (656)
T ss_dssp EEEECCEEETTBCSSCCEEECCEEE---EE--TTEEEEECCSCTTTSCSEEEEEEEECTTSCBCCCEEEEEE
T ss_pred EEEecCccccCcCCCCcEEecceEe---cC--CCEEEEECCCCCCcCCCcCeEEEEECCCCcccccEEEEEe
Confidence 9999999999999999999999985 23 24889999999999999999999996 9999999999984
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=5e-36 Score=303.49 Aligned_cols=279 Identities=15% Similarity=0.154 Sum_probs=214.0
Q ss_pred CCCcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEE
Q 009420 35 SIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQ 114 (535)
Q Consensus 35 ~~~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v 114 (535)
.+..|..|+++..+++||++||.+ + . ....+++||+.+++|+.++.++..++..++++.+++||+
T Consensus 11 ~~~~~~~~~~~~~~~~i~v~GG~~-~-~-------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv 75 (308)
T 1zgk_A 11 SGLVPRGSHAPKVGRLIYTAGGYF-R-Q-------------SLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYA 75 (308)
T ss_dssp ----------CCCCCCEEEECCBS-S-S-------------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE
T ss_pred CCeeeCCccccCCCCEEEEEeCcC-C-C-------------CcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEE
Confidence 355678889988999999999962 1 1 234689999999999999866555544455566999999
Q ss_pred EcCC----CC--CCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccC----CeeEEE-eCCCCCCe
Q 009420 115 TGGF----ND--GEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQ----FNYEFY-PKNGAPNV 183 (535)
Q Consensus 115 ~GG~----~~--g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~----~~~E~y-P~~~~~~w 183 (535)
+||. .. ..+++++||+. +++|+++++|+.+|.+++++++ +|+|||+||.+. ..+|+| +.++ +|
T Consensus 76 ~GG~~~~~~~~~~~~~~~~~d~~---~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W 149 (308)
T 1zgk_A 76 VGGRNNSPDGNTDSSALDCYNPM---TNQWSPCAPMSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERD--EW 149 (308)
T ss_dssp ECCEEEETTEEEECCCEEEEETT---TTEEEECCCCSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETTTT--EE
T ss_pred ECCCcCCCCCCeecceEEEECCC---CCeEeECCCCCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCCCC--eE
Confidence 9997 32 25789999999 9999999999999999999888 899999999764 357889 7764 88
Q ss_pred eeeccccccCCccccCCCcceEEEeeCCcEEEEecC-------eEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeec
Q 009420 184 YSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANN-------RAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLP 256 (535)
Q Consensus 184 ~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~-------~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lp 256 (535)
..++.+.. ..+.+..+..+++||++||. ++++||+.+++|+ .++++|. +|..+ +++.
T Consensus 150 ~~~~~~p~--------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~---~~~~-- 213 (308)
T 1zgk_A 150 HLVAPMLT--------RRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNT--IRSGA---GVCV-- 213 (308)
T ss_dssp EECCCCSS--------CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSS--CCBSC---EEEE--
T ss_pred eECCCCCc--------cccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCC--ccccc---eEEE--
Confidence 76543322 23445666779999999983 5899999999999 5887775 57643 2332
Q ss_pred ccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCC
Q 009420 257 LKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGA 335 (535)
Q Consensus 257 l~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~ 335 (535)
.+++||++||.+... ..+++++||+.. ++|+.. +|+.+|..++++++ +++|||+||.
T Consensus 214 --------~~~~iyv~GG~~~~~-----------~~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~ 271 (308)
T 1zgk_A 214 --------LHNCIYAAGGYDGQD-----------QLNSVERYDVET--ETWTFVAPMKHRRSALGITVH-QGRIYVLGGY 271 (308)
T ss_dssp --------ETTEEEEECCBCSSS-----------BCCCEEEEETTT--TEEEECCCCSSCCBSCEEEEE-TTEEEEECCB
T ss_pred --------ECCEEEEEeCCCCCC-----------ccceEEEEeCCC--CcEEECCCCCCCccceEEEEE-CCEEEEEcCc
Confidence 389999999976321 267899999985 899998 99999999987665 9999999997
Q ss_pred CCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceee
Q 009420 336 GKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVL 383 (535)
Q Consensus 336 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~L 383 (535)
.. . ....++++|||+++ +|+.+++|+.+|.+|++++|
T Consensus 272 ~~-~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 272 DG-H-------TFLDSVECYDPDTD---TWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp CS-S-------CBCCEEEEEETTTT---EEEEEEECSSCCBSCEEEEC
T ss_pred CC-C-------cccceEEEEcCCCC---EEeecCCCCCCcccceeEeC
Confidence 62 1 23457899999999 99999999999999987764
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=299.80 Aligned_cols=274 Identities=16% Similarity=0.257 Sum_probs=212.2
Q ss_pred EEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCC--
Q 009420 44 QLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDG-- 121 (535)
Q Consensus 44 ~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g-- 121 (535)
.+..+++||++||.+. . ....+++||+.+++|+.++.++..++..+++..+++||++||....
T Consensus 11 ~~~~~~~i~v~GG~~~--~-------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~ 75 (302)
T 2xn4_A 11 PMNLPKLMVVVGGQAP--K-------------AIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLR 75 (302)
T ss_dssp ----CEEEEEECCBSS--S-------------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSB
T ss_pred ccCCCCEEEEECCCCC--C-------------CCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCcc
Confidence 3345889999999641 1 1246899999999999998665555555555669999999997532
Q ss_pred CCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCC----eeEEE-eCCCCCCeeeeccccccCCcc
Q 009420 122 EKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQF----NYEFY-PKNGAPNVYSLPFLVQTNDPR 196 (535)
Q Consensus 122 ~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~----~~E~y-P~~~~~~w~~~~~l~~~~~~~ 196 (535)
.+++++||+. +++|+++++|+.+|.+++++++ +++|||+||.+.. ++|+| +.++ +|..++.+..
T Consensus 76 ~~~~~~~d~~---~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~----- 144 (302)
T 2xn4_A 76 VRTVDSYDPV---KDQWTSVANMRDRRSTLGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVAPMNT----- 144 (302)
T ss_dssp CCCEEEEETT---TTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEECSSCEEEEEEEEETTTT--EEEEECCCSS-----
T ss_pred ccceEEECCC---CCceeeCCCCCccccceEEEEE-CCEEEEEcCCCCCccCceEEEEeCCCC--eEeecCCCCC-----
Confidence 5789999999 9999999999999999998888 8999999997652 57888 7764 8986653322
Q ss_pred ccCCCcceEEEeeCCcEEEEecC---------eEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCc
Q 009420 197 VENNLYPFVFLNVDGFLFIFANN---------RAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAA 267 (535)
Q Consensus 197 ~~~~~yp~~~~~~dG~ifv~gg~---------~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~g 267 (535)
..+.+..+..+++||++||. ++++||+.+++|. .++++|. +|..+ +++. .++
T Consensus 145 ---~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~---~~~~----------~~~ 205 (302)
T 2xn4_A 145 ---RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMST--RRSGA---GVGV----------LNN 205 (302)
T ss_dssp ---CCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSS--CCBSC---EEEE----------ETT
T ss_pred ---cccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCcc--ccccc---cEEE----------ECC
Confidence 23446677789999999973 4789999999999 4787775 57643 3332 389
Q ss_pred EEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCC
Q 009420 268 EVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGR 346 (535)
Q Consensus 268 kIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~ 346 (535)
+||++||.+... ..+++++||+.. ++|+.. +|+.+|..++++++ +++|||+||.. +.
T Consensus 206 ~iyv~GG~~~~~-----------~~~~~~~yd~~~--~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~-~~------- 263 (302)
T 2xn4_A 206 LLYAVGGHDGPL-----------VRKSVEVYDPTT--NAWRQVADMNMCRRNAGVCAV-NGLLYVVGGDD-GS------- 263 (302)
T ss_dssp EEEEECCBSSSS-----------BCCCEEEEETTT--TEEEEECCCSSCCBSCEEEEE-TTEEEEECCBC-SS-------
T ss_pred EEEEECCCCCCc-----------ccceEEEEeCCC--CCEeeCCCCCCccccCeEEEE-CCEEEEECCcC-CC-------
Confidence 999999976321 367899999985 899998 99999999986655 99999999975 21
Q ss_pred CCccccEEEeCCCCCCCceeecC-CCCCCcccccceeecCCCcE
Q 009420 347 DPVLAPVVYRPDNIPGSRFDLQN-PSTIPRMYHSTAVLLRDGRV 389 (535)
Q Consensus 347 ~~~~~~e~YDP~t~~g~~Wt~~~-~~~~~R~yhs~a~LlpDG~V 389 (535)
....++++|||+++ +|+.++ +|+.+|.+|+++++ +++|
T Consensus 264 ~~~~~v~~yd~~~~---~W~~~~~~~~~~r~~~~~~~~--~~~i 302 (302)
T 2xn4_A 264 CNLASVEYYNPTTD---KWTVVSSCMSTGRSYAGVTVI--DKRL 302 (302)
T ss_dssp SBCCCEEEEETTTT---EEEECSSCCSSCCBSCEEEEE--EC--
T ss_pred cccccEEEEcCCCC---eEEECCcccCcccccceEEEe--cccC
Confidence 23457899999999 999997 89999999988776 5553
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=292.22 Aligned_cols=266 Identities=13% Similarity=0.174 Sum_probs=212.4
Q ss_pred CCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCC-CCCeEE
Q 009420 48 NDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFND-GEKKIR 126 (535)
Q Consensus 48 ~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~-g~~~v~ 126 (535)
.+.||++||.+. . ..+++|||.+++|+.++.++..++..++++.+++||++||... ..++++
T Consensus 11 ~~~l~~~GG~~~----~-------------~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 73 (306)
T 3ii7_A 11 HDYRIALFGGSQ----P-------------QSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMD 73 (306)
T ss_dssp CCEEEEEECCSS----T-------------TSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEE
T ss_pred cceEEEEeCCCC----C-------------ceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEE
Confidence 478999999641 1 3589999999999999876656665666667999999999762 357899
Q ss_pred EEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCcc-C----CeeEEE-eCCCCCCeeeeccccccCCccccCC
Q 009420 127 SFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRR-Q----FNYEFY-PKNGAPNVYSLPFLVQTNDPRVENN 200 (535)
Q Consensus 127 ~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~-~----~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~ 200 (535)
+|||. +++|+++++|+.+|..++++++ +++|||+||.+ . ..+++| |.++ +|..++.+.. .
T Consensus 74 ~~d~~---~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~--------~ 139 (306)
T 3ii7_A 74 CYNVV---KDSWYSKLGPPTPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTE--SWHTKPSMLT--------Q 139 (306)
T ss_dssp EEETT---TTEEEEEECCSSCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTT--EEEEECCCSS--------C
T ss_pred EEeCC---CCeEEECCCCCccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCC--ceEeCCCCcC--------C
Confidence 99999 9999999999999999998888 89999999986 2 357889 7764 7986653322 2
Q ss_pred CcceEEEeeCCcEEEEec-----------CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEE
Q 009420 201 LYPFVFLNVDGFLFIFAN-----------NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEV 269 (535)
Q Consensus 201 ~yp~~~~~~dG~ifv~gg-----------~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkI 269 (535)
.+.+..+..+++||++|| +++++||+.+++|+ .++++|. +|..+ +++. .+++|
T Consensus 140 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~---~~~~----------~~~~i 203 (306)
T 3ii7_A 140 RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT-ELCPMIE--ARKNH---GLVF----------VKDKI 203 (306)
T ss_dssp CBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE-EECCCSS--CCBSC---EEEE----------ETTEE
T ss_pred cceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE-ECCCccc--hhhcc---eEEE----------ECCEE
Confidence 344666777999999997 24789999999999 5887775 57643 3333 38999
Q ss_pred EEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCC
Q 009420 270 LVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDP 348 (535)
Q Consensus 270 yv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~ 348 (535)
|++||.+... ..+++++||+.. ++|+.. +|+.+|..++++++ +++|||+||.+. . ..
T Consensus 204 ~v~GG~~~~~-----------~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~-~-------~~ 261 (306)
T 3ii7_A 204 FAVGGQNGLG-----------GLDNVEYYDIKL--NEWKMVSPMPWKGVTVKCAAV-GSIVYVLAGFQG-V-------GR 261 (306)
T ss_dssp EEECCEETTE-----------EBCCEEEEETTT--TEEEECCCCSCCBSCCEEEEE-TTEEEEEECBCS-S-------SB
T ss_pred EEEeCCCCCC-----------CCceEEEeeCCC--CcEEECCCCCCCccceeEEEE-CCEEEEEeCcCC-C-------ee
Confidence 9999975321 267899999985 899998 99999999987766 999999999762 1 12
Q ss_pred ccccEEEeCCCCCCCceeecCCCCCCcccccceeecC
Q 009420 349 VLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLR 385 (535)
Q Consensus 349 ~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~Llp 385 (535)
...+++|||+++ +|+.+++|+.+|.+|+++++..
T Consensus 262 ~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 262 LGHILEYNTETD---KWVANSKVRAFPVTSCLICVVD 295 (306)
T ss_dssp CCEEEEEETTTT---EEEEEEEEECCSCTTCEEEEEE
T ss_pred eeeEEEEcCCCC---eEEeCCCcccccceeEEEEECC
Confidence 447899999999 9999999999999998887743
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.7e-34 Score=288.02 Aligned_cols=268 Identities=18% Similarity=0.217 Sum_probs=211.7
Q ss_pred eCCeEEEEec-CCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCC--CC
Q 009420 47 NNDRVVMFDR-SDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDG--EK 123 (535)
Q Consensus 47 ~~gkv~v~gg-~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g--~~ 123 (535)
.+++||++|| .+ ... ....+.+||+.+++|+.++.++..++..+++..+++||++||.... .+
T Consensus 13 ~~~~i~~~GG~~~-~~~-------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~ 78 (301)
T 2vpj_A 13 ANEVLLVVGGFGS-QQS-------------PIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLS 78 (301)
T ss_dssp CCEEEEEECCEET-TTE-------------ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCC
T ss_pred CCCEEEEEeCccC-CCc-------------ceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCc
Confidence 5889999999 43 111 2346899999999999998665555555556679999999997532 57
Q ss_pred eEEEEcCCCCCCCC---ceecCCCCcccccceEEEecCCcEEEEcCccC----CeeEEE-eCCCCCCeeeeccccccCCc
Q 009420 124 KIRSFVPCNDESCD---WKEIDGLGARRWYATDHILPDGRIIIIGGRRQ----FNYEFY-PKNGAPNVYSLPFLVQTNDP 195 (535)
Q Consensus 124 ~v~~ydp~~~~~~~---W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~----~~~E~y-P~~~~~~w~~~~~l~~~~~~ 195 (535)
++++||+. +++ |+++++|+.+|..++++++ +++||++||.+. ..+|+| +.++ +|..++.+..
T Consensus 79 ~~~~~d~~---~~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~---- 148 (301)
T 2vpj_A 79 SVECLDYT---ADEDGVWYSVAPMNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNID--QWSMLGDMQT---- 148 (301)
T ss_dssp CEEEEETT---CCTTCCCEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTT--EEEEEEECSS----
T ss_pred eEEEEECC---CCCCCeeEECCCCCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCC--eEEECCCCCC----
Confidence 89999999 888 9999999999999998888 899999999764 357888 7654 8876543322
Q ss_pred cccCCCcceEEEeeCCcEEEEec-------CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcE
Q 009420 196 RVENNLYPFVFLNVDGFLFIFAN-------NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAE 268 (535)
Q Consensus 196 ~~~~~~yp~~~~~~dG~ifv~gg-------~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gk 268 (535)
..+.+..+..+++||++|| +++++||+.+++|+ .++++|. +|..+ +++. .+++
T Consensus 149 ----~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~~---~~~~----------~~~~ 208 (301)
T 2vpj_A 149 ----AREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT-NVTPMAT--KRSGA---GVAL----------LNDH 208 (301)
T ss_dssp ----CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-EECCCSS--CCBSC---EEEE----------ETTE
T ss_pred ----CcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE-eCCCCCc--ccccc---eEEE----------ECCE
Confidence 2244566677999999998 35899999999999 4787775 46642 3332 3899
Q ss_pred EEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCC
Q 009420 269 VLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRD 347 (535)
Q Consensus 269 Iyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~ 347 (535)
||++||.+... ..+++++||+.. ++|+.. +|+.+|..++++++ +++||++||.+. . .
T Consensus 209 i~v~GG~~~~~-----------~~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~-~-------~ 266 (301)
T 2vpj_A 209 IYVVGGFDGTA-----------HLSSVEAYNIRT--DSWTTVTSMTTPRCYVGATVL-RGRLYAIAGYDG-N-------S 266 (301)
T ss_dssp EEEECCBCSSS-----------BCCCEEEEETTT--TEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCS-S-------S
T ss_pred EEEEeCCCCCc-----------ccceEEEEeCCC--CcEEECCCCCCcccceeEEEE-CCEEEEEcCcCC-C-------c
Confidence 99999976321 267899999985 899998 99999999987665 999999999752 1 2
Q ss_pred CccccEEEeCCCCCCCceeecCCCCCCcccccceee
Q 009420 348 PVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVL 383 (535)
Q Consensus 348 ~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~L 383 (535)
....+++|||+++ +|+.+++|+.+|..|+++++
T Consensus 267 ~~~~v~~yd~~~~---~W~~~~~~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 267 LLSSIECYDPIID---SWEVVTSMGTQRCDAGVCVL 299 (301)
T ss_dssp BEEEEEEEETTTT---EEEEEEEEEEEEESCEEEEE
T ss_pred ccccEEEEcCCCC---eEEEcCCCCcccccceEEEe
Confidence 3457899999999 99999999999999987765
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4.3e-33 Score=283.04 Aligned_cols=274 Identities=16% Similarity=0.242 Sum_probs=207.4
Q ss_pred CCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc-cccccccceecCCCcEEEEcCCC---CC--
Q 009420 48 NDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ-SNVWCSSGAVRPDGVLIQTGGFN---DG-- 121 (535)
Q Consensus 48 ~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~-~~~~c~~~~~l~dG~l~v~GG~~---~g-- 121 (535)
+++||++||. .+.+|||.+++|...++. ...++..++++.+++||++||.. ++
T Consensus 15 ~~~i~~~GG~---------------------~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~ 73 (318)
T 2woz_A 15 KDLILLVNDT---------------------AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKD 73 (318)
T ss_dssp EEEEEEECSS---------------------EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC------
T ss_pred cchhhhcccc---------------------ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccC
Confidence 5689999983 268999999999985433 23445555667799999999952 11
Q ss_pred ---CCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccC------CeeEEE-eCCCCCCeeeeccccc
Q 009420 122 ---EKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQ------FNYEFY-PKNGAPNVYSLPFLVQ 191 (535)
Q Consensus 122 ---~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~------~~~E~y-P~~~~~~w~~~~~l~~ 191 (535)
.+.+++|||. +++|+++++|+.+|..++++++ +++|||+||.+. ..+++| +.++ +|..++.+..
T Consensus 74 ~~~~~~~~~~d~~---~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~ 147 (318)
T 2woz_A 74 QPLQSYFFQLDNV---SSEWVGLPPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVKNLPI 147 (318)
T ss_dssp -CCCBEEEEEETT---TTEEEECSCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEECCCSS
T ss_pred CCccccEEEEeCC---CCcEEECCCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCC--CEeECCCCCC
Confidence 1348999999 9999999999999999998888 899999999752 257888 7754 8886543221
Q ss_pred cCCccccCCCcceEEEeeCCcEEEEecC--------eEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCC
Q 009420 192 TNDPRVENNLYPFVFLNVDGFLFIFANN--------RAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAP 263 (535)
Q Consensus 192 ~~~~~~~~~~yp~~~~~~dG~ifv~gg~--------~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~ 263 (535)
..+.+..+..+|+||++||. ++++||+.+++|. .++++|. +|..+ ++++
T Consensus 148 --------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~--~~~~---------- 204 (318)
T 2woz_A 148 --------KVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK-DLAPMKT--PRSMF--GVAI---------- 204 (318)
T ss_dssp --------CEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEE-EECCCSS--CCBSC--EEEE----------
T ss_pred --------cccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEE-ECCCCCC--Ccccc--eEEE----------
Confidence 23446677789999999983 4899999999999 5887775 57653 3333
Q ss_pred CCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCCCCCCCCc
Q 009420 264 SVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGW 342 (535)
Q Consensus 264 ~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~ 342 (535)
.+++||++||..... ..+++++||+.. ++|+.. +||.+|..++++++ +++||++||........
T Consensus 205 -~~~~iyv~GG~~~~~-----------~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~ 269 (318)
T 2woz_A 205 -HKGKIVIAGGVTEDG-----------LSASVEAFDLKT--NKWEVMTEFPQERSSISLVSL-AGSLYAIGGFAMIQLES 269 (318)
T ss_dssp -ETTEEEEEEEEETTE-----------EEEEEEEEETTT--CCEEECCCCSSCCBSCEEEEE-TTEEEEECCBCCBC---
T ss_pred -ECCEEEEEcCcCCCC-----------ccceEEEEECCC--CeEEECCCCCCcccceEEEEE-CCEEEEECCeeccCCCC
Confidence 389999999975321 256889999985 899998 99999999987655 99999999975210000
Q ss_pred c-cCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEec
Q 009420 343 E-LGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGG 393 (535)
Q Consensus 343 ~-~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~G 393 (535)
+ ........+++|||+++ +|+.+ ++.+|..|+++++ +++||+..
T Consensus 270 ~~~~~~~~~~v~~yd~~~~---~W~~~--~~~~r~~~~~~~~--~~~iyi~~ 314 (318)
T 2woz_A 270 KEFAPTEVNDIWKYEDDKK---EWAGM--LKEIRYASGASCL--ATRLNLFK 314 (318)
T ss_dssp -CCBCCBCCCEEEEETTTT---EEEEE--ESCCGGGTTCEEE--EEEEEGGG
T ss_pred ceeccceeeeEEEEeCCCC---Eehhh--cccccccccceee--CCEEEEEE
Confidence 0 00122457899999999 99999 8889999988776 99999874
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.5e-33 Score=284.37 Aligned_cols=279 Identities=16% Similarity=0.139 Sum_probs=209.3
Q ss_pred cccCCCceEEcccCC--CcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcccccc
Q 009420 22 TDAAGGGWQLLQKSI--GISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNV 99 (535)
Q Consensus 22 ~~~~~g~W~~l~~~~--~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~ 99 (535)
=++.+++|+. ++++ ..|..|++++.+++||++||......... . .....+++||+.+++|+.++.++..
T Consensus 18 yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~---~-----~~~~~~~~~d~~~~~W~~~~~~p~~ 88 (315)
T 4asc_A 18 YDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKE---D-----PMSAYFLQFDHLDSEWLGMPPLPSP 88 (315)
T ss_dssp EETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSS---S-----CEEEEEEEEETTTTEEEECCCBSSC
T ss_pred ECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCc---c-----ccccceEEecCCCCeEEECCCCCcc
Confidence 3678899987 5554 36888999989999999999621100000 0 0224588999999999999876655
Q ss_pred ccccceecCCCcEEEEcCCC-----CCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEE
Q 009420 100 WCSSGAVRPDGVLIQTGGFN-----DGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEF 174 (535)
Q Consensus 100 ~c~~~~~l~dG~l~v~GG~~-----~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~ 174 (535)
++..+++..+++||++||.. ...+++++||+. +++|+++++|+.+|..++++++ +++|||+||.....
T Consensus 89 r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~---~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~--- 161 (315)
T 4asc_A 89 RCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRL---SFKWGESDPLPYVVYGHTVLSH-MDLVYVIGGKGSDR--- 161 (315)
T ss_dssp EESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETT---TTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCTTS---
T ss_pred hhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCC---CCcEeECCCCCCcccceeEEEE-CCEEEEEeCCCCCC---
Confidence 55555566699999999953 125789999999 8999999999999999988887 89999999984221
Q ss_pred EeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecCeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEe
Q 009420 175 YPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVL 254 (535)
Q Consensus 175 yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~ 254 (535)
. .+ +++++||+.+++|+ .++++|. +|..+ + ++.
T Consensus 162 -------~-----~~-----------------------------~~~~~yd~~~~~W~-~~~~~p~--~r~~~--~-~~~ 194 (315)
T 4asc_A 162 -------K-----CL-----------------------------NKMCVYDPKKFEWK-ELAPMQT--ARSLF--G-ATV 194 (315)
T ss_dssp -------C-----BC-----------------------------CCEEEEETTTTEEE-ECCCCSS--CCBSC--E-EEE
T ss_pred -------c-----cc-----------------------------ceEEEEeCCCCeEE-ECCCCCC--chhce--E-EEE
Confidence 0 00 13789999999999 5887875 57653 3 332
Q ss_pred ecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEc
Q 009420 255 LPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLIN 333 (535)
Q Consensus 255 lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvG 333 (535)
.+++||++||.+... .++++++||+.. ++|+.. +|+.+|..++++++ +++|||+|
T Consensus 195 ----------~~~~iyv~GG~~~~~-----------~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~l~v~G 250 (315)
T 4asc_A 195 ----------HDGRIIVAAGVTDTG-----------LTSSAEVYSITD--NKWAPFEAFPQERSSLSLVSL-VGTLYAIG 250 (315)
T ss_dssp ----------ETTEEEEEEEECSSS-----------EEEEEEEEETTT--TEEEEECCCSSCCBSCEEEEE-TTEEEEEE
T ss_pred ----------ECCEEEEEeccCCCC-----------ccceEEEEECCC--CeEEECCCCCCcccceeEEEE-CCEEEEEC
Confidence 389999999976321 256899999985 899998 99999999987665 99999999
Q ss_pred CCCCCCCCcc--cCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCC
Q 009420 334 GAGKGTAGWE--LGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSN 395 (535)
Q Consensus 334 G~~~g~~g~~--~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~ 395 (535)
|... ..... ........+++|||+++ +|+.+ ++.+|..|+++++ ++++|+....
T Consensus 251 G~~~-~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~--~~~~r~~~~~~~~--~~~l~v~~~~ 306 (315)
T 4asc_A 251 GFAT-LETESGELVPTELNDIWRYNEEEK---KWEGV--LREIAYAAGATFL--PVRLNVLRLT 306 (315)
T ss_dssp EEEE-EECTTSCEEEEEEEEEEEEETTTT---EEEEE--ESCSSCCSSCEEE--EEEECGGGSE
T ss_pred Cccc-cCcCCccccccccCcEEEecCCCC---hhhhh--ccCCcCccceEEe--CCEEEEEEeh
Confidence 9751 10000 00012346899999999 99999 6778999987776 9999998764
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=7.6e-32 Score=272.74 Aligned_cols=255 Identities=15% Similarity=0.196 Sum_probs=198.7
Q ss_pred cccceecCCCcEEEEcCCC-CCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCc----cC----Ce
Q 009420 101 CSSGAVRPDGVLIQTGGFN-DGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGR----RQ----FN 171 (535)
Q Consensus 101 c~~~~~l~dG~l~v~GG~~-~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~----~~----~~ 171 (535)
+...++..+++||++||.. ...+++++|||. +++|+++++|+.+|.+++++++ +++||++||. +. ..
T Consensus 16 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~---~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~ 91 (308)
T 1zgk_A 16 RGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPS---NGTWLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSA 91 (308)
T ss_dssp -----CCCCCCEEEECCBSSSBCCCEEEEETT---TTEEEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCC
T ss_pred CCccccCCCCEEEEEeCcCCCCcceEEEEcCC---CCeEeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecce
Confidence 3344456699999999973 235789999999 9999999999999999988887 8999999998 32 35
Q ss_pred eEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec-------CeEEEEECCCCeEEEecCCCCCCCC
Q 009420 172 YEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN-------NRAILFDYVNNKVVKQYPAIPGGDP 243 (535)
Q Consensus 172 ~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-------~~~~~yDp~t~~W~~~~p~~p~~~~ 243 (535)
+++| |.++ +|..++.+.. ..+.+..+..+|+||++|| +++++||+.+++|. .++++|. +
T Consensus 92 ~~~~d~~~~--~W~~~~~~p~--------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~ 158 (308)
T 1zgk_A 92 LDCYNPMTN--QWSPCAPMSV--------PRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWH-LVAPMLT--R 158 (308)
T ss_dssp EEEEETTTT--EEEECCCCSS--------CCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEE-ECCCCSS--C
T ss_pred EEEECCCCC--eEeECCCCCc--------CccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEe-ECCCCCc--c
Confidence 7888 7764 8876653322 2234566677999999998 46899999999999 5887775 4
Q ss_pred CCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeE
Q 009420 244 RSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMT 322 (535)
Q Consensus 244 R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v 322 (535)
|..+ ++++ .+++||++||.+... .++++++||+.. ++|+.. +|+.+|..++++
T Consensus 159 r~~~---~~~~----------~~~~iyv~GG~~~~~-----------~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~ 212 (308)
T 1zgk_A 159 RIGV---GVAV----------LNRLLYAVGGFDGTN-----------RLNSAECYYPER--NEWRMITAMNTIRSGAGVC 212 (308)
T ss_dssp CBSC---EEEE----------ETTEEEEECCBCSSC-----------BCCCEEEEETTT--TEEEECCCCSSCCBSCEEE
T ss_pred ccce---EEEE----------ECCEEEEEeCCCCCC-----------cCceEEEEeCCC--CeEeeCCCCCCccccceEE
Confidence 6643 3333 389999999976321 267899999985 899998 999999999877
Q ss_pred EccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCCCccccc
Q 009420 323 LLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNF 402 (535)
Q Consensus 323 ~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~~~~~~~ 402 (535)
++ +++|||+||... . ....++++|||+++ +|+.+++++.+|..|+++++ +++|||.||.....
T Consensus 213 ~~-~~~iyv~GG~~~-~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~--- 275 (308)
T 1zgk_A 213 VL-HNCIYAAGGYDG-Q-------DQLNSVERYDVETE---TWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHT--- 275 (308)
T ss_dssp EE-TTEEEEECCBCS-S-------SBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSC---
T ss_pred EE-CCEEEEEeCCCC-C-------CccceEEEEeCCCC---cEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCc---
Confidence 65 999999999762 1 12457899999999 99999999999999987765 99999999964321
Q ss_pred cCCCCCceeeEEEEcCCCC
Q 009420 403 TGVLFPTELSLEAFSPYYL 421 (535)
Q Consensus 403 ~~~~~~~~~~vE~y~Ppyl 421 (535)
...++|+|+|..-
T Consensus 276 ------~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 276 ------FLDSVECYDPDTD 288 (308)
T ss_dssp ------BCCEEEEEETTTT
T ss_pred ------ccceEEEEcCCCC
Confidence 1357999999764
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.4e-32 Score=281.69 Aligned_cols=294 Identities=14% Similarity=0.156 Sum_probs=197.8
Q ss_pred EcccCCCcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECC--CCCEEECcccc-ccccccceec
Q 009420 31 LLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVL--TNEFRPLFVQS-NVWCSSGAVR 107 (535)
Q Consensus 31 ~l~~~~~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~--t~~w~~~~~~~-~~~c~~~~~l 107 (535)
.++++|..|..|++++.+++||++||.+ + ..+.+||+. +++|+.++.++ ..++..++++
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~-~-----------------~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~ 63 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSA-G-----------------TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF 63 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGG-T-----------------TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcC-C-----------------CeEEEEccccCCCCeeECCCCCCCcCccceEEE
Confidence 4667787888899888899999999964 1 147899998 49999998665 4555555556
Q ss_pred CCCcEEEEcCC-C--C----CCCeEEEEcCCCCCCCCceecCCCC-cccccceEEEecCCcEEEEcCccCCee-------
Q 009420 108 PDGVLIQTGGF-N--D----GEKKIRSFVPCNDESCDWKEIDGLG-ARRWYATDHILPDGRIIIIGGRRQFNY------- 172 (535)
Q Consensus 108 ~dG~l~v~GG~-~--~----g~~~v~~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~~~------- 172 (535)
.+++|||+||. . + ..+++++|||. +++|+++++|+ .+|..++++++ +++|||+||.+....
T Consensus 64 ~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~---~~~W~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 139 (357)
T 2uvk_A 64 IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK---TNSWVKLMSHAPMGMAGHVTFVH-NGKAYVTGGVNQNIFNGYFEDL 139 (357)
T ss_dssp ETTEEEEECCEEECTTSCEEECCCEEEEETT---TTEEEECSCCCSSCCSSEEEEEE-TTEEEEEECCCHHHHHHHHHHH
T ss_pred ECCEEEEEcCCCCCCCccceeeccEEEEeCC---CCcEEECCCCCCcccccceEEEE-CCEEEEEeCcCCCcCcccccch
Confidence 69999999998 2 1 15789999999 99999999998 99999888886 899999999863210
Q ss_pred EEE-eCCCCCCeeee--ccccccCCccccCCCcceEEEeeCCcEEEEecCeEEEEECCCCeEEEecCCCCCCCCCCCCCC
Q 009420 173 EFY-PKNGAPNVYSL--PFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPGGDPRSYPSS 249 (535)
Q Consensus 173 E~y-P~~~~~~w~~~--~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~ 249 (535)
+.+ |..+ .|... .++..... .|- --+.+++||+.+++|+. ++++|. +|.+.
T Consensus 140 ~~~~~~~~--~~~~~~~~~~~~~~~------~~~-------------~~~~v~~yd~~~~~W~~-~~~~p~--~~~~~-- 193 (357)
T 2uvk_A 140 NEAGKDST--AIDKINAHYFDKKAE------DYF-------------FNKFLLSFDPSTQQWSY-AGESPW--YGTAG-- 193 (357)
T ss_dssp HHHTTCHH--HHHHHHHHHHSSCGG------GGC-------------CCCEEEEEETTTTEEEE-EEECSS--CCCBS--
T ss_pred hhcCCccc--chhhhhhhhcccccc------ccC-------------CcccEEEEeCCCCcEEE-CCCCCC--CCccc--
Confidence 000 0000 00000 00000000 000 00248899999999994 777775 34331
Q ss_pred CceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCce--eceeEEccC
Q 009420 250 GSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRV--MGDMTLLPN 326 (535)
Q Consensus 250 g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~--~~~~v~lpd 326 (535)
.+++. .+++||++||..... ..++.+++||+...+++|+.. +|+.+|. .++++ +.+
T Consensus 194 ~~~~~----------~~~~iyv~GG~~~~~----------~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~ 252 (357)
T 2uvk_A 194 AAVVN----------KGDKTWLINGEAKPG----------LRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAG-ISN 252 (357)
T ss_dssp CEEEE----------ETTEEEEECCEEETT----------EECCCEEEEECC---CEEEECCCSSTTTCCBSCEEE-EET
T ss_pred ccEEE----------ECCEEEEEeeecCCC----------cccCceEEEEecCCCCcEEecCCCCCCcccccceEE-EEC
Confidence 12332 389999999964211 125678888873335899998 8877754 55454 459
Q ss_pred CeEEEEcCCCCCCC------C--c-ccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCCC
Q 009420 327 GNVLLINGAGKGTA------G--W-ELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPH 397 (535)
Q Consensus 327 G~I~vvGG~~~g~~------g--~-~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~~ 397 (535)
++|||+||...... + | ......+.++++|||+++ +|+.+++++.+|.+|+++++ +++|||+||...
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 327 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG---KWDKSGELSQGRAYGVSLPW--NNSLLIIGGETA 327 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC------CEEEEECSSCCBSSEEEEE--TTEEEEEEEECG
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC---ceeeCCCCCCCcccceeEEe--CCEEEEEeeeCC
Confidence 99999999642100 0 0 001123457899999999 99999999999999977654 999999999654
Q ss_pred c
Q 009420 398 A 398 (535)
Q Consensus 398 ~ 398 (535)
.
T Consensus 328 ~ 328 (357)
T 2uvk_A 328 G 328 (357)
T ss_dssp G
T ss_pred C
Confidence 3
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.4e-31 Score=269.38 Aligned_cols=250 Identities=16% Similarity=0.219 Sum_probs=197.2
Q ss_pred CCCcEEEEcCCCC-CCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccC----CeeEEE-eCCCCC
Q 009420 108 PDGVLIQTGGFND-GEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQ----FNYEFY-PKNGAP 181 (535)
Q Consensus 108 ~dG~l~v~GG~~~-g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~----~~~E~y-P~~~~~ 181 (535)
.+++||++||... ..+++++||+. +++|+.+++|+.+|.+++++++ +++||++||.+. ..+++| |.++
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~---~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~-- 87 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFK---EERWHQVAELPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKD-- 87 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETT---TTEEEEECCCSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTT--
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCc---CCcEeEcccCCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCC--
Confidence 4789999999753 35789999999 8999999999999999998887 899999999764 357888 7764
Q ss_pred CeeeeccccccCCccccCCCcceEEEeeCCcEEEEec-------CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEe
Q 009420 182 NVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN-------NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVL 254 (535)
Q Consensus 182 ~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-------~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~ 254 (535)
+|..++.+.. ..+.+..++.+|+||++|| +++++||+.+++|. .++++|. +|..+ +++.
T Consensus 88 ~W~~~~~~p~--------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~~---~~~~ 153 (302)
T 2xn4_A 88 QWTSVANMRD--------RRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF-HVAPMNT--RRSSV---GVGV 153 (302)
T ss_dssp EEEEECCCSS--------CCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEE-EECCCSS--CCBSC---EEEE
T ss_pred ceeeCCCCCc--------cccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEe-ecCCCCC--cccCc---eEEE
Confidence 8986654322 2344667777999999998 35899999999999 5887875 57643 2332
Q ss_pred ecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEc
Q 009420 255 LPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLIN 333 (535)
Q Consensus 255 lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvG 333 (535)
++++||++||.+.... ..++++++||+.. ++|+.. +|+.+|..++++++ +++|||+|
T Consensus 154 ----------~~~~iyv~GG~~~~~~---------~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~iyv~G 211 (302)
T 2xn4_A 154 ----------VGGLLYAVGGYDVASR---------QCLSTVECYNATT--NEWTYIAEMSTRRSGAGVGVL-NNLLYAVG 211 (302)
T ss_dssp ----------ETTEEEEECCEETTTT---------EECCCEEEEETTT--TEEEEECCCSSCCBSCEEEEE-TTEEEEEC
T ss_pred ----------ECCEEEEEeCCCCCCC---------ccccEEEEEeCCC--CcEEECCCCccccccccEEEE-CCEEEEEC
Confidence 3899999999752110 1367899999985 899998 99999999987665 99999999
Q ss_pred CCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCCCccccccCCCCCceeeE
Q 009420 334 GAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSL 413 (535)
Q Consensus 334 G~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~~~~~~~~~~~~~~~~~v 413 (535)
|... . ....++++|||+++ +|+.+++++.+|..|+++++ +++|||.||..... ...++
T Consensus 212 G~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~---------~~~~v 269 (302)
T 2xn4_A 212 GHDG-P-------LVRKSVEVYDPTTN---AWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSC---------NLASV 269 (302)
T ss_dssp CBSS-S-------SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS---------BCCCE
T ss_pred CCCC-C-------cccceEEEEeCCCC---CEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCc---------ccccE
Confidence 9762 1 12347899999999 99999999999999976665 99999999964321 13579
Q ss_pred EEEcCCCC
Q 009420 414 EAFSPYYL 421 (535)
Q Consensus 414 E~y~Ppyl 421 (535)
|+|+|..-
T Consensus 270 ~~yd~~~~ 277 (302)
T 2xn4_A 270 EYYNPTTD 277 (302)
T ss_dssp EEEETTTT
T ss_pred EEEcCCCC
Confidence 99999864
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.6e-31 Score=268.08 Aligned_cols=251 Identities=15% Similarity=0.149 Sum_probs=198.2
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccC---CeeEEE-eCCCCCCee
Q 009420 109 DGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQ---FNYEFY-PKNGAPNVY 184 (535)
Q Consensus 109 dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~---~~~E~y-P~~~~~~w~ 184 (535)
.+.||++||... .+++++|||. +++|+.+++|+.+|.+++++++ +++|||+||.+. ..+++| |.++ +|.
T Consensus 11 ~~~l~~~GG~~~-~~~~~~~d~~---~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~--~W~ 83 (306)
T 3ii7_A 11 HDYRIALFGGSQ-PQSCRYFNPK---DYSWTDIRCPFEKRRDAACVFW-DNVVYILGGSQLFPIKRMDCYNVVKD--SWY 83 (306)
T ss_dssp CCEEEEEECCSS-TTSEEEEETT---TTEEEECCCCSCCCBSCEEEEE-TTEEEEECCBSSSBCCEEEEEETTTT--EEE
T ss_pred cceEEEEeCCCC-CceEEEecCC---CCCEecCCCCCcccceeEEEEE-CCEEEEEeCCCCCCcceEEEEeCCCC--eEE
Confidence 478999999865 7899999999 9999999999999999998887 899999999762 357888 7764 888
Q ss_pred eeccccccCCccccCCCcceEEEeeCCcEEEEecC--------eEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeec
Q 009420 185 SLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANN--------RAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLP 256 (535)
Q Consensus 185 ~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~--------~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lp 256 (535)
.++.+.. ..+.+..+..+++||++||. ++++||+.+++|. .++++|. +|..+ +++.
T Consensus 84 ~~~~~p~--------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~~---~~~~-- 147 (306)
T 3ii7_A 84 SKLGPPT--------PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH-TKPSMLT--QRCSH---GMVE-- 147 (306)
T ss_dssp EEECCSS--------CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE-EECCCSS--CCBSC---EEEE--
T ss_pred ECCCCCc--------cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE-eCCCCcC--Cccee---EEEE--
Confidence 6553322 23446667779999999984 4899999999999 5888886 57643 3332
Q ss_pred ccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCC
Q 009420 257 LKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGA 335 (535)
Q Consensus 257 l~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~ 335 (535)
.+++||++||....... ...++++++||+.. ++|+.. +|+.+|..|+++++ +++|||+||.
T Consensus 148 --------~~~~iyv~GG~~~~~~~-------~~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~ 209 (306)
T 3ii7_A 148 --------ANGLIYVCGGSLGNNVS-------GRVLNSCEVYDPAT--ETWTELCPMIEARKNHGLVFV-KDKIFAVGGQ 209 (306)
T ss_dssp --------ETTEEEEECCEESCTTT-------CEECCCEEEEETTT--TEEEEECCCSSCCBSCEEEEE-TTEEEEECCE
T ss_pred --------ECCEEEEECCCCCCCCc-------ccccceEEEeCCCC--CeEEECCCccchhhcceEEEE-CCEEEEEeCC
Confidence 38999999997522110 01267899999985 899998 99999999987766 9999999997
Q ss_pred CCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCCCccccccCCCCCceeeEEE
Q 009420 336 GKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEA 415 (535)
Q Consensus 336 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~~~~~~~~~~~~~~~~~vE~ 415 (535)
.. . .....+++|||+++ +|+.+++++.+|..|+++++ +++|||+||..... ...++++
T Consensus 210 ~~-~-------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~---------~~~~~~~ 267 (306)
T 3ii7_A 210 NG-L-------GGLDNVEYYDIKLN---EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVG---------RLGHILE 267 (306)
T ss_dssp ET-T-------EEBCCEEEEETTTT---EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSS---------BCCEEEE
T ss_pred CC-C-------CCCceEEEeeCCCC---cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCe---------eeeeEEE
Confidence 52 1 22457899999999 99999999999999987766 99999999964331 1347999
Q ss_pred EcCCCCC
Q 009420 416 FSPYYLD 422 (535)
Q Consensus 416 y~Ppyl~ 422 (535)
|+|..-.
T Consensus 268 yd~~~~~ 274 (306)
T 3ii7_A 268 YNTETDK 274 (306)
T ss_dssp EETTTTE
T ss_pred EcCCCCe
Confidence 9998743
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.98 E-value=1.7e-31 Score=270.92 Aligned_cols=253 Identities=16% Similarity=0.134 Sum_probs=189.6
Q ss_pred eeEEEECCCCCEEECccc-cccccccceecCCCcEEEEcCCC----C-C---CCeEEEEcCCCCCCCCceecCCCCcccc
Q 009420 79 HSVEYSVLTNEFRPLFVQ-SNVWCSSGAVRPDGVLIQTGGFN----D-G---EKKIRSFVPCNDESCDWKEIDGLGARRW 149 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~-~~~~c~~~~~l~dG~l~v~GG~~----~-g---~~~v~~ydp~~~~~~~W~~~~~m~~~R~ 149 (535)
.+.+|||.+++|+..+.. +..++..++++.+++||++||.. . . .+.+++|||. +++|+++++|+.+|.
T Consensus 14 ~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~---~~~W~~~~~~p~~r~ 90 (315)
T 4asc_A 14 GAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL---DSEWLGMPPLPSPRC 90 (315)
T ss_dssp EEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT---TTEEEECCCBSSCEE
T ss_pred ceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC---CCeEEECCCCCcchh
Confidence 368999999999873332 22444455566799999999952 1 1 2358999999 999999999999999
Q ss_pred cceEEEecCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecCeEEEEECCCC
Q 009420 150 YATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNN 229 (535)
Q Consensus 150 y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~~~~yDp~t~ 229 (535)
.++++++ +++|||+||.+... .. ..+ +++++||+.++
T Consensus 91 ~~~~~~~-~~~lyv~GG~~~~~----------~~---~~~-----------------------------~~~~~~d~~~~ 127 (315)
T 4asc_A 91 LFGLGEA-LNSIYVVGGREIKD----------GE---RCL-----------------------------DSVMCYDRLSF 127 (315)
T ss_dssp SCEEEEE-TTEEEEECCEESST----------TC---CBC-----------------------------CCEEEEETTTT
T ss_pred ceeEEEE-CCEEEEEeCCcCCC----------CC---ccc-----------------------------ceEEEECCCCC
Confidence 9998888 89999999975310 00 000 13789999999
Q ss_pred eEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeee
Q 009420 230 KVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVL 309 (535)
Q Consensus 230 ~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~ 309 (535)
+|+ .++++|. +|..+ +++. .+++||++||...+. ..++++++||+.. ++|+.
T Consensus 128 ~W~-~~~~~p~--~r~~~---~~~~----------~~~~iyv~GG~~~~~----------~~~~~~~~yd~~~--~~W~~ 179 (315)
T 4asc_A 128 KWG-ESDPLPY--VVYGH---TVLS----------HMDLVYVIGGKGSDR----------KCLNKMCVYDPKK--FEWKE 179 (315)
T ss_dssp EEE-ECCCCSS--CCBSC---EEEE----------ETTEEEEECCBCTTS----------CBCCCEEEEETTT--TEEEE
T ss_pred cEe-ECCCCCC--cccce---eEEE----------ECCEEEEEeCCCCCC----------cccceEEEEeCCC--CeEEE
Confidence 999 5888876 57643 3332 389999999974221 2478899999985 89999
Q ss_pred e-cCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCc
Q 009420 310 E-TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGR 388 (535)
Q Consensus 310 ~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~ 388 (535)
. +||.+|..|+++++ +++|||+||... . .....+++|||+++ +|+.+++++.+|..|+++++ +++
T Consensus 180 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~ 245 (315)
T 4asc_A 180 LAPMQTARSLFGATVH-DGRIIVAAGVTD-T-------GLTSSAEVYSITDN---KWAPFEAFPQERSSLSLVSL--VGT 245 (315)
T ss_dssp CCCCSSCCBSCEEEEE-TTEEEEEEEECS-S-------SEEEEEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTE
T ss_pred CCCCCCchhceEEEEE-CCEEEEEeccCC-C-------CccceEEEEECCCC---eEEECCCCCCcccceeEEEE--CCE
Confidence 8 99999999987765 999999999762 1 12457899999999 99999999999999987765 999
Q ss_pred EEEecCCCCccccccCCCC--CceeeEEEEcCCCC
Q 009420 389 VLVGGSNPHAYYNFTGVLF--PTELSLEAFSPYYL 421 (535)
Q Consensus 389 V~v~GG~~~~~~~~~~~~~--~~~~~vE~y~Ppyl 421 (535)
|||.||....... ++ .+ ....++|+|+|..-
T Consensus 246 l~v~GG~~~~~~~-~~-~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 246 LYAIGGFATLETE-SG-ELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEEEEEEEEEECT-TS-CEEEEEEEEEEEEETTTT
T ss_pred EEEECCccccCcC-Cc-cccccccCcEEEecCCCC
Confidence 9999996431100 00 00 02357999999864
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.98 E-value=1.4e-30 Score=261.89 Aligned_cols=248 Identities=18% Similarity=0.239 Sum_probs=196.0
Q ss_pred CCCcEEEEcC-CCC--CCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccC----CeeEEE-eCCC
Q 009420 108 PDGVLIQTGG-FND--GEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQ----FNYEFY-PKNG 179 (535)
Q Consensus 108 ~dG~l~v~GG-~~~--g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~----~~~E~y-P~~~ 179 (535)
.+++||++|| ... ..+++++|||. +++|+.+++|+.+|.+++++.+ +++||++||.+. ..+++| +.++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~---~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~ 88 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPK---TQEWSFLPSITRKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDYTAD 88 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETT---TTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCC---CCeEEeCCCCChhhccccEEEE-CCEEEEEcCCCCCccCceEEEEECCCC
Confidence 3889999999 432 25789999999 8999999999999999988887 899999999764 257888 7654
Q ss_pred CCC---eeeeccccccCCccccCCCcceEEEeeCCcEEEEec-------CeEEEEECCCCeEEEecCCCCCCCCCCCCCC
Q 009420 180 APN---VYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN-------NRAILFDYVNNKVVKQYPAIPGGDPRSYPSS 249 (535)
Q Consensus 180 ~~~---w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-------~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~ 249 (535)
. |..++.+.. ..+.+..+..+++||++|| +++++||+.+++|. .++++|. +|..+
T Consensus 89 --~~~~W~~~~~~p~--------~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~~-- 153 (301)
T 2vpj_A 89 --EDGVWYSVAPMNV--------RRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS-MLGDMQT--AREGA-- 153 (301)
T ss_dssp --TTCCCEEECCCSS--------CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE-EEEECSS--CCBSC--
T ss_pred --CCCeeEECCCCCC--------CccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE-ECCCCCC--Ccccc--
Confidence 6 886653322 2244566777999999998 36899999999999 4787775 57643
Q ss_pred CceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCe
Q 009420 250 GSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGN 328 (535)
Q Consensus 250 g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~ 328 (535)
+++. .+++||++||.+... .++++++||+.. ++|+.. +|+.+|..++++++ +++
T Consensus 154 -~~~~----------~~~~iyv~GG~~~~~-----------~~~~~~~~d~~~--~~W~~~~~~p~~r~~~~~~~~-~~~ 208 (301)
T 2vpj_A 154 -GLVV----------ASGVIYCLGGYDGLN-----------ILNSVEKYDPHT--GHWTNVTPMATKRSGAGVALL-NDH 208 (301)
T ss_dssp -EEEE----------ETTEEEEECCBCSSC-----------BCCCEEEEETTT--TEEEEECCCSSCCBSCEEEEE-TTE
T ss_pred -eEEE----------ECCEEEEECCCCCCc-----------ccceEEEEeCCC--CcEEeCCCCCcccccceEEEE-CCE
Confidence 3332 389999999976321 367899999985 899998 99999999987665 999
Q ss_pred EEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCCCccccccCCCCC
Q 009420 329 VLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFP 408 (535)
Q Consensus 329 I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~~~~~~~~~~~~~ 408 (535)
|||+||... . ....++++||++++ +|+.+++++.+|..|+++++ +++||+.||.....
T Consensus 209 i~v~GG~~~-~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~--------- 266 (301)
T 2vpj_A 209 IYVVGGFDG-T-------AHLSSVEAYNIRTD---SWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNS--------- 266 (301)
T ss_dssp EEEECCBCS-S-------SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS---------
T ss_pred EEEEeCCCC-C-------cccceEEEEeCCCC---cEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCc---------
Confidence 999999762 1 12457899999999 99999999999999987665 99999999964321
Q ss_pred ceeeEEEEcCCCC
Q 009420 409 TELSLEAFSPYYL 421 (535)
Q Consensus 409 ~~~~vE~y~Ppyl 421 (535)
...++|+|+|..-
T Consensus 267 ~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 267 LLSSIECYDPIID 279 (301)
T ss_dssp BEEEEEEEETTTT
T ss_pred ccccEEEEcCCCC
Confidence 2458999998764
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.96 E-value=2e-28 Score=248.60 Aligned_cols=266 Identities=17% Similarity=0.165 Sum_probs=194.4
Q ss_pred ccCCCceEEcccCC--CcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccc
Q 009420 23 DAAGGGWQLLQKSI--GISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVW 100 (535)
Q Consensus 23 ~~~~g~W~~l~~~~--~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~ 100 (535)
++..++|... +++ ..|..|++++.+++||++||......... . .....+++||+.+++|+.++.++..+
T Consensus 30 d~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~---~-----~~~~~~~~~d~~~~~W~~~~~~p~~r 100 (318)
T 2woz_A 30 DPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKD---Q-----PLQSYFFQLDNVSSEWVGLPPLPSAR 100 (318)
T ss_dssp ETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC---------------CCCBEEEEEETTTTEEEECSCBSSCB
T ss_pred CCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCccccC---C-----CccccEEEEeCCCCcEEECCCCCccc
Confidence 6778999984 333 46788999989999999999531111000 0 01235889999999999998766555
Q ss_pred cccceecCCCcEEEEcCCCC----CCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccC-----Ce
Q 009420 101 CSSGAVRPDGVLIQTGGFND----GEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQ-----FN 171 (535)
Q Consensus 101 c~~~~~l~dG~l~v~GG~~~----g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~-----~~ 171 (535)
+..+++..+++||++||... ..+++++||+. +++|+++++|+.+|..++++++ +|+|||+||... ..
T Consensus 101 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~---~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 176 (318)
T 2woz_A 101 CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPV---AAKWSEVKNLPIKVYGHNVISH-NGMIYCLGGKTDDKKCTNR 176 (318)
T ss_dssp CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETT---TTEEEEECCCSSCEESCEEEEE-TTEEEEECCEESSSCBCCC
T ss_pred cccceEEECCEEEEEcCccCCCCcccceEEEEeCC---CCCEeECCCCCCcccccEEEEE-CCEEEEEcCCCCCCCccce
Confidence 55555666999999999742 24689999999 9999999999999999988886 899999999742 35
Q ss_pred eEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec-------CeEEEEECCCCeEEEecCCCCCCCC
Q 009420 172 YEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN-------NRAILFDYVNNKVVKQYPAIPGGDP 243 (535)
Q Consensus 172 ~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-------~~~~~yDp~t~~W~~~~p~~p~~~~ 243 (535)
+++| |.++ +|..++.+.. ..+.+..+..+++||++|| +++++||+++++|+ .++++|. +
T Consensus 177 ~~~yd~~~~--~W~~~~~~p~--------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~ 243 (318)
T 2woz_A 177 VFIYNPKKG--DWKDLAPMKT--------PRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWE-VMTEFPQ--E 243 (318)
T ss_dssp EEEEETTTT--EEEEECCCSS--------CCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEE-ECCCCSS--C
T ss_pred EEEEcCCCC--EEEECCCCCC--------CcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEE-ECCCCCC--c
Confidence 7889 7764 8986643322 2234566777999999998 35789999999999 5887876 4
Q ss_pred CCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeecCCCCceeceeEE
Q 009420 244 RSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTL 323 (535)
Q Consensus 244 R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~~~R~~~~~v~ 323 (535)
|..+ +++. .+++||++||........ .+......+++++||+.. ++|+.. |+.+|..|++++
T Consensus 244 r~~~---~~~~----------~~~~i~v~GG~~~~~~~~--~~~~~~~~~~v~~yd~~~--~~W~~~-~~~~r~~~~~~~ 305 (318)
T 2woz_A 244 RSSI---SLVS----------LAGSLYAIGGFAMIQLES--KEFAPTEVNDIWKYEDDK--KEWAGM-LKEIRYASGASC 305 (318)
T ss_dssp CBSC---EEEE----------ETTEEEEECCBCCBC------CCBCCBCCCEEEEETTT--TEEEEE-ESCCGGGTTCEE
T ss_pred ccce---EEEE----------ECCEEEEECCeeccCCCC--ceeccceeeeEEEEeCCC--CEehhh-ccccccccccee
Confidence 6642 3332 389999999975311000 000012367899999985 899988 889999998776
Q ss_pred ccCCeEEEEc
Q 009420 324 LPNGNVLLIN 333 (535)
Q Consensus 324 lpdG~I~vvG 333 (535)
+ +++||++.
T Consensus 306 ~-~~~iyi~~ 314 (318)
T 2woz_A 306 L-ATRLNLFK 314 (318)
T ss_dssp E-EEEEEGGG
T ss_pred e-CCEEEEEE
Confidence 6 89999864
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=5.1e-29 Score=278.17 Aligned_cols=293 Identities=12% Similarity=0.140 Sum_probs=203.9
Q ss_pred eEEEECCCCCEEECccccccccccceecC-CCcEEEEcCCCC--------CCCeEEEEcCCCCCCCCceecCCCCccccc
Q 009420 80 SVEYSVLTNEFRPLFVQSNVWCSSGAVRP-DGVLIQTGGFND--------GEKKIRSFVPCNDESCDWKEIDGLGARRWY 150 (535)
Q Consensus 80 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~-dG~l~v~GG~~~--------g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y 150 (535)
.+.|||.+++|+++..++. ..++.++++ +|+||++||... +...+++|||. +++|+.++.|+.+|..
T Consensus 168 ~~~~dp~~~~W~~~~~~P~-~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~---t~~w~~~~~~~~~~~~ 243 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI-VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS---TGIVSDRTVTVTKHDM 243 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS-CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT---TCCBCCCEEEECSCCC
T ss_pred cccCCCCCCeeeeeccCCC-CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC---CCcEEeCcccCCCCCC
Confidence 4578999999999876554 333445565 999999999742 12478999999 9999999999887754
Q ss_pred c--eEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--------C
Q 009420 151 A--TDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--------N 219 (535)
Q Consensus 151 ~--s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--------~ 219 (535)
+ +++++.||+||++||.+...+++| |.++ +|..++.+... ..|+.+++++||+||++|| +
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~--~W~~~~~~~~~-------R~~~s~~~~~dg~iyv~GG~~~~~~~~~ 314 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD--SWIPGPDMQVA-------RGYQSSATMSDGRVFTIGGSWSGGVFEK 314 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGT--EEEECCCCSSC-------CSSCEEEECTTSCEEEECCCCCSSSCCC
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCC--ceeECCCCCcc-------ccccceEEecCCeEEEEeCcccCCcccc
Confidence 4 466777999999999887789999 8764 89866543221 2355566677999999999 3
Q ss_pred eEEEEECCCCeEEEecC-----CCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCc
Q 009420 220 RAILFDYVNNKVVKQYP-----AIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNT 294 (535)
Q Consensus 220 ~~~~yDp~t~~W~~~~p-----~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s 294 (535)
++|+||+++++|.. ++ +|+. .|. .+..+ .+++||++||.+...+ ..-..++
T Consensus 315 ~~e~yd~~t~~W~~-~~~~~~~p~~~--~~~---~~~~~-----------~~~~iyv~Gg~~g~~~-------~~~~~~~ 370 (656)
T 1k3i_A 315 NGEVYSPSSKTWTS-LPNAKVNPMLT--ADK---QGLYR-----------SDNHAWLFGWKKGSVF-------QAGPSTA 370 (656)
T ss_dssp CEEEEETTTTEEEE-ETTSCSGGGCC--CCT---TGGGT-----------TTCSCCEEECGGGCEE-------ECCSSSE
T ss_pred cceEeCCCCCccee-CCCcccccccc--ccc---cceee-----------cCCceEEEECCCCcEE-------EecCccc
Confidence 68999999999984 53 3332 232 12111 4889999999752111 0113578
Q ss_pred eEEEEecCCCCCeeee--cCCC------CceeceeEE--ccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCc
Q 009420 295 CARIKITDPTPTWVLE--TMPQ------PRVMGDMTL--LPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSR 364 (535)
Q Consensus 295 ~e~~d~~~~~~~W~~~--~m~~------~R~~~~~v~--lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~ 364 (535)
+++||+.. ++|... .++. +|..+.+++ ..+++|||+||... ..+. ...+....+++|||+++ +
T Consensus 371 v~~yd~~~--~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~-~~~~-~~~~~~~~v~~yd~~~~---~ 443 (656)
T 1k3i_A 371 MNWYYTSG--SGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD-YQDS-DATTNAHIITLGEPGTS---P 443 (656)
T ss_dssp EEEEECST--TCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS-SSSS-BCCCCEEEEECCSTTSC---C
T ss_pred eeeeecCC--cceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC-CCCC-CcCCcceEEEcCCCCCC---C
Confidence 99999985 777653 3332 344555554 35899999999752 1100 01122336899999999 9
Q ss_pred eeecC--CCCCCcccccceeecCCCcEEEecCCCCccccccCCCCCceeeEEEEcCCC
Q 009420 365 FDLQN--PSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYY 420 (535)
Q Consensus 365 Wt~~~--~~~~~R~yhs~a~LlpDG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppy 420 (535)
|+.+. +|+.+|..|++ ++++||+|||+||..... .+.+ .....++|+|+|..
T Consensus 444 W~~~~~~~mp~~R~~~~~-~~l~~g~i~v~GG~~~~~-~~~~--~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 444 NTVFASNGLYFARTFHTS-VVLPDGSTFITGGQRRGI-PFED--STPVFTPEIYVPEQ 497 (656)
T ss_dssp EEEECTTCCSSCCBSCEE-EECTTSCEEEECCBSBCC-TTCC--CSBCCCCEEEEGGG
T ss_pred eeEEccCCCCCCcccCCe-EECCCCCEEEECCcccCc-CcCC--CCcccceEEEcCCC
Confidence 99886 99999999964 456899999999964321 0110 01245799999976
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=8.2e-28 Score=269.95 Aligned_cols=269 Identities=13% Similarity=0.118 Sum_probs=191.4
Q ss_pred ceEEcccCCCcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECc-c------ccccc
Q 009420 28 GWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLF-V------QSNVW 100 (535)
Q Consensus 28 ~W~~l~~~~~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~-~------~~~~~ 100 (535)
+|...+..+..|..|+++ .+++||++||.+. . ....+.+||+.+++|+.++ . +..+.
T Consensus 378 ~~~~~~~~p~rr~g~~~~-~~~~iyv~GG~~~--~-------------~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~ 441 (695)
T 2zwa_A 378 QLLECECPINRKFGDVDV-AGNDVFYMGGSNP--Y-------------RVNEILQLSIHYDKIDMKNIEVSSSEVPVARM 441 (695)
T ss_dssp EEEECCCTTCCBSCEEEE-CSSCEEEECCBSS--S-------------BCCCEEEEEECSSCEEEEECCCCCSCCCCCCB
T ss_pred eEeccCCCCCCceeEEEE-ECCEEEEECCCCC--C-------------CcCcEEEEECCCCeEEEeccCCCCCCCCcccc
Confidence 455554444444545444 7999999999752 1 2346899999999999987 3 34555
Q ss_pred cccceecC-CCcEEEEcCCCCC---CCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEEe
Q 009420 101 CSSGAVRP-DGVLIQTGGFNDG---EKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFYP 176 (535)
Q Consensus 101 c~~~~~l~-dG~l~v~GG~~~g---~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP 176 (535)
+++.+++. +|+|||+||.... .+++++||+. +++|+.+++|+.+|++|+++++.+|+|||+||.+...
T Consensus 442 ~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~---t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----- 513 (695)
T 2zwa_A 442 CHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK---TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP----- 513 (695)
T ss_dssp SCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT---TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-----
T ss_pred ceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC---CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-----
Confidence 65555554 9999999998642 5789999999 9999999999999999999987789999999975320
Q ss_pred CCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecCeEEEEECCCCeEEEecCC---CCCCCCCCCCCCCceE
Q 009420 177 KNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPA---IPGGDPRSYPSSGSAV 253 (535)
Q Consensus 177 ~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~~~~yDp~t~~W~~~~p~---~p~~~~R~~~~~g~~v 253 (535)
++++||+.+++|.. +++ +|. +|..+ ++++
T Consensus 514 -------------------------------------------~v~~yd~~t~~W~~-~~~~g~~p~--~r~~~--~a~v 545 (695)
T 2zwa_A 514 -------------------------------------------AMLLYNVTEEIFKD-VTPKDEFFQ--NSLVS--AGLE 545 (695)
T ss_dssp -------------------------------------------SEEEEETTTTEEEE-CCCSSGGGG--SCCBS--CEEE
T ss_pred -------------------------------------------CEEEEECCCCceEE-ccCCCCCCC--cccce--eEEE
Confidence 16899999999994 664 554 46543 2233
Q ss_pred eecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCC------eeee-cC-CCCceeceeEEcc
Q 009420 254 LLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPT------WVLE-TM-PQPRVMGDMTLLP 325 (535)
Q Consensus 254 ~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~------W~~~-~m-~~~R~~~~~v~lp 325 (535)
+ .. ..++||++||...+.. ..++++++||+.. ++ |+.. +| +.+|..|+++++-
T Consensus 546 ~-~~-------~~~~iyv~GG~~~~~~---------~~~~~v~~yd~~~--~~w~~~~~W~~~~~~p~~~R~~~~~~~~~ 606 (695)
T 2zwa_A 546 F-DP-------VSKQGIILGGGFMDQT---------TVSDKAIIFKYDA--ENATEPITVIKKLQHPLFQRYGSQIKYIT 606 (695)
T ss_dssp E-ET-------TTTEEEEECCBCTTSS---------CBCCEEEEEEECT--TCSSCCEEEEEEEECGGGCCBSCEEEEEE
T ss_pred E-eC-------CCCEEEEECCcCCCCC---------eeeCcEEEEEccC--CccccceEEEEcCCCCCCCcccceEEEeC
Confidence 2 11 1289999999753210 1367899999985 67 8887 76 5899999887763
Q ss_pred CCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCC--------CcccccceeecCCCcEEEecCCCC
Q 009420 326 NGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTI--------PRMYHSTAVLLRDGRVLVGGSNPH 397 (535)
Q Consensus 326 dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~--------~R~yhs~a~LlpDG~V~v~GG~~~ 397 (535)
|++|||+||... .. .......+++|||+++ +|+.+. ++. .|..|++ +++.||+|||.||...
T Consensus 607 ~~~iyv~GG~~~-~~----~~~~~~~v~~yd~~t~---~W~~~~-~p~~~~~~~~p~~~gh~~-~~~~~g~i~v~GGg~~ 676 (695)
T 2zwa_A 607 PRKLLIVGGTSP-SG----LFDRTNSIISLDPLSE---TLTSIP-ISRRIWEDHSLMLAGFSL-VSTSMGTIHIIGGGAT 676 (695)
T ss_dssp TTEEEEECCBCS-SC----CCCTTTSEEEEETTTT---EEEECC-CCHHHHHHSCCCCSSCEE-ECC---CEEEECCEEE
T ss_pred CCEEEEECCccC-CC----CCCCCCeEEEEECCCC---eEEEee-ccccccCCCCccceeeeE-EEeCCCEEEEEeCCcc
Confidence 399999999752 11 0123457999999999 999642 221 2445754 4556779999999643
No 17
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.95 E-value=1.5e-27 Score=245.64 Aligned_cols=263 Identities=17% Similarity=0.182 Sum_probs=179.5
Q ss_pred CCceEEcccCC-CcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcccc-cccccc
Q 009420 26 GGGWQLLQKSI-GISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQS-NVWCSS 103 (535)
Q Consensus 26 ~g~W~~l~~~~-~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~-~~~c~~ 103 (535)
.++|+.+++++ ..|..|++++.+++||++||....... + ......+++||+.+++|+.++.+. ..++..
T Consensus 42 ~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~-----~----~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~ 112 (357)
T 2uvk_A 42 DKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEG-----L----TQVFNDVHKYNPKTNSWVKLMSHAPMGMAGH 112 (357)
T ss_dssp SCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTS-----C----EEECCCEEEEETTTTEEEECSCCCSSCCSSE
T ss_pred CCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCc-----c----ceeeccEEEEeCCCCcEEECCCCCCcccccc
Confidence 58999999988 689999999999999999997210000 0 002457899999999999998654 444444
Q ss_pred ceecCCCcEEEEcCCCC------------------------------------CCCeEEEEcCCCCCCCCceecCCCCcc
Q 009420 104 GAVRPDGVLIQTGGFND------------------------------------GEKKIRSFVPCNDESCDWKEIDGLGAR 147 (535)
Q Consensus 104 ~~~l~dG~l~v~GG~~~------------------------------------g~~~v~~ydp~~~~~~~W~~~~~m~~~ 147 (535)
+++..+++||++||... ..+++++|||. +++|+.+++|+.+
T Consensus 113 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~---~~~W~~~~~~p~~ 189 (357)
T 2uvk_A 113 VTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS---TQQWSYAGESPWY 189 (357)
T ss_dssp EEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT---TTEEEEEEECSSC
T ss_pred eEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC---CCcEEECCCCCCC
Confidence 44447999999999752 14789999999 9999999999988
Q ss_pred ccc-ceEEEecCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecCeEEEEEC
Q 009420 148 RWY-ATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDY 226 (535)
Q Consensus 148 R~y-~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~~~~yDp 226 (535)
|.+ ++++++ +++|||+||.+.... ... .+++||+
T Consensus 190 ~~~~~~~~~~-~~~iyv~GG~~~~~~------------------~~~--------------------------~v~~~d~ 224 (357)
T 2uvk_A 190 GTAGAAVVNK-GDKTWLINGEAKPGL------------------RTD--------------------------AVFELDF 224 (357)
T ss_dssp CCBSCEEEEE-TTEEEEECCEEETTE------------------ECC--------------------------CEEEEEC
T ss_pred CcccccEEEE-CCEEEEEeeecCCCc------------------ccC--------------------------ceEEEEe
Confidence 766 777776 899999999753210 000 2567765
Q ss_pred --CCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCccccc-cc-cc----ccccCCceEEE
Q 009420 227 --VNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQA-EK-GV----FVAALNTCARI 298 (535)
Q Consensus 227 --~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~-~~-~~----~~pa~~s~e~~ 298 (535)
.+++|. .++++|. +|.... .++++ .+++||++||......... .. .. ....+.++++|
T Consensus 225 d~~~~~W~-~~~~~~~--~~~~~~-~~~~~----------~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~y 290 (357)
T 2uvk_A 225 TGNNLKWN-KLAPVSS--PDGVAG-GFAGI----------SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIH 290 (357)
T ss_dssp C---CEEE-ECCCSST--TTCCBS-CEEEE----------ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEE
T ss_pred cCCCCcEE-ecCCCCC--Cccccc-ceEEE----------ECCEEEEEcCccccCCcccccccceeccccccceeeEEEE
Confidence 999999 5777765 343211 22332 3899999999642110000 00 00 00124578999
Q ss_pred EecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCC
Q 009420 299 KITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPST 372 (535)
Q Consensus 299 d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~ 372 (535)
|+.. ++|+.. +||.+|..++++++ +++|||+||.+.. ...+.++++|+.+++ +|....+.+
T Consensus 291 d~~~--~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~-------~~~~~~v~~l~~~~~---~~~~~~~~~ 352 (357)
T 2uvk_A 291 LWHN--GKWDKSGELSQGRAYGVSLPW-NNSLLIIGGETAG-------GKAVTDSVLITVKDN---KVTVQNLEH 352 (357)
T ss_dssp ECC-----CEEEEECSSCCBSSEEEEE-TTEEEEEEEECGG-------GCEEEEEEEEEC-CC---SCEEEC---
T ss_pred ecCC--CceeeCCCCCCCcccceeEEe-CCEEEEEeeeCCC-------CCEeeeEEEEEEcCc---EeEeeeccc
Confidence 9984 899998 99999999987654 9999999997621 112357899999999 999876654
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.91 E-value=1.6e-23 Score=235.06 Aligned_cols=238 Identities=13% Similarity=0.124 Sum_probs=174.7
Q ss_pred CEEECccccccccccceecCCCcEEEEcCCCC-CCCeEEEEcCCCCCCCCceecC-C-----CCcccccceEEEec-CCc
Q 009420 89 EFRPLFVQSNVWCSSGAVRPDGVLIQTGGFND-GEKKIRSFVPCNDESCDWKEID-G-----LGARRWYATDHILP-DGR 160 (535)
Q Consensus 89 ~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~-g~~~v~~ydp~~~~~~~W~~~~-~-----m~~~R~y~s~~~L~-dG~ 160 (535)
+|...+....++.+ ++++.+++||++||... ..+++++|||. +++|+.++ + |+.+|++|+++++. +|+
T Consensus 378 ~~~~~~~~p~rr~g-~~~~~~~~iyv~GG~~~~~~~~v~~yd~~---~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ 453 (695)
T 2zwa_A 378 QLLECECPINRKFG-DVDVAGNDVFYMGGSNPYRVNEILQLSIH---YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQ 453 (695)
T ss_dssp EEEECCCTTCCBSC-EEEECSSCEEEECCBSSSBCCCEEEEEEC---SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTE
T ss_pred eEeccCCCCCCcee-EEEEECCEEEEECCCCCCCcCcEEEEECC---CCeEEEeccCCCCCCCCccccceEEEEEccCCE
Confidence 34444433333333 33446999999999753 35789999999 99999988 5 89999999999986 899
Q ss_pred EEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecCeEEEEECCCCeEEEecCCCCC
Q 009420 161 IIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKVVKQYPAIPG 240 (535)
Q Consensus 161 vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~~~~yDp~t~~W~~~~p~~p~ 240 (535)
|||+||.+... . .+ . ++++||+.+++|+ .++++|.
T Consensus 454 lyv~GG~~~~~----------~-----~~---~--------------------------dv~~yd~~t~~W~-~~~~~p~ 488 (695)
T 2zwa_A 454 LLLIGGRKAPH----------Q-----GL---S--------------------------DNWIFDMKTREWS-MIKSLSH 488 (695)
T ss_dssp EEEECCBSSTT----------C-----BC---C--------------------------CCEEEETTTTEEE-ECCCCSB
T ss_pred EEEEcCCCCCC----------C-----cc---c--------------------------cEEEEeCCCCcEE-ECCCCCC
Confidence 99999986431 0 01 1 2789999999999 5888876
Q ss_pred CCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-c---CCCCc
Q 009420 241 GDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-T---MPQPR 316 (535)
Q Consensus 241 ~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~---m~~~R 316 (535)
+|..+ +++++ .+++||++||.+. . . ++++||+.. ++|+.. + ||.+|
T Consensus 489 --~R~~h---~~~~~---------~~~~iyv~GG~~~-~------------~-~v~~yd~~t--~~W~~~~~~g~~p~~r 538 (695)
T 2zwa_A 489 --TRFRH---SACSL---------PDGNVLILGGVTE-G------------P-AMLLYNVTE--EIFKDVTPKDEFFQNS 538 (695)
T ss_dssp --CCBSC---EEEEC---------TTSCEEEECCBCS-S------------C-SEEEEETTT--TEEEECCCSSGGGGSC
T ss_pred --Ccccc---eEEEE---------cCCEEEEECCCCC-C------------C-CEEEEECCC--CceEEccCCCCCCCcc
Confidence 57753 33331 2899999999752 1 1 789999985 899987 4 99999
Q ss_pred eeceeEEccC---CeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCc------eeecCCC-CCCcccccceeecCC
Q 009420 317 VMGDMTLLPN---GNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSR------FDLQNPS-TIPRMYHSTAVLLRD 386 (535)
Q Consensus 317 ~~~~~v~lpd---G~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~------Wt~~~~~-~~~R~yhs~a~LlpD 386 (535)
..|+++++ + ++|||+||..... ......+++|||.++ + |+.+.++ +.+|..|+++++ .|
T Consensus 539 ~~~~a~v~-~~~~~~iyv~GG~~~~~------~~~~~~v~~yd~~~~---~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~ 607 (695)
T 2zwa_A 539 LVSAGLEF-DPVSKQGIILGGGFMDQ------TTVSDKAIIFKYDAE---NATEPITVIKKLQHPLFQRYGSQIKYI-TP 607 (695)
T ss_dssp CBSCEEEE-ETTTTEEEEECCBCTTS------SCBCCEEEEEEECTT---CSSCCEEEEEEEECGGGCCBSCEEEEE-ET
T ss_pred cceeEEEE-eCCCCEEEEECCcCCCC------CeeeCcEEEEEccCC---ccccceEEEEcCCCCCCCcccceEEEe-CC
Confidence 99986665 5 8999999975211 123457899999999 8 8988876 589999976654 34
Q ss_pred CcEEEecCCCCccccccCCCCCceeeEEEEcCCCCC
Q 009420 387 GRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLD 422 (535)
Q Consensus 387 G~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppyl~ 422 (535)
++|||.||...... ......+|+|+|....
T Consensus 608 ~~iyv~GG~~~~~~------~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 608 RKLLIVGGTSPSGL------FDRTNSIISLDPLSET 637 (695)
T ss_dssp TEEEEECCBCSSCC------CCTTTSEEEEETTTTE
T ss_pred CEEEEECCccCCCC------CCCCCeEEEEECCCCe
Confidence 99999999643311 1124579999998753
No 19
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.35 E-value=0.00036 Score=69.26 Aligned_cols=248 Identities=11% Similarity=0.056 Sum_probs=122.9
Q ss_pred ceeEEEECCCCCEEECccccccccccceecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcc--------c
Q 009420 78 AHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGV-LIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGAR--------R 148 (535)
Q Consensus 78 ~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~--------R 148 (535)
..+.+||+.+++....-... ....+.++.+||+ +|+.+... ..+.+||+. +.+-...-++... .
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~---~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~~ 141 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVN---SAVTAIDAK---TGEVKGRLVLDDRKRTEEVRPL 141 (353)
T ss_dssp EEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTT---TEEEEEETT---TCCEEEEEESCCCCCCSSCCCC
T ss_pred ccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCC---CEEEEEeCC---CCeeEEEEecCCCccccccCCC
Confidence 36889999998754432211 1233445667887 66665532 579999997 5543211111110 1
Q ss_pred ccceEEEecCCc-EEEEcCccCCeeEEE-eCCCCCCee-eeccccccCCccccCCCcce-EEEeeCCcEEEEec--CeEE
Q 009420 149 WYATDHILPDGR-IIIIGGRRQFNYEFY-PKNGAPNVY-SLPFLVQTNDPRVENNLYPF-VFLNVDGFLFIFAN--NRAI 222 (535)
Q Consensus 149 ~y~s~~~L~dG~-vyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~~yp~-~~~~~dG~ifv~gg--~~~~ 222 (535)
.-...+.-+||+ +|+.+......+.+| +.+. +-. .++.. ...|. ....+||+.+++++ ..+.
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~--~~~~~~~~~----------~~~~~~~~~s~dg~~l~~~~~~~~i~ 209 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGKESVIWVVDGGNI--KLKTAIQNT----------GKMSTGLALDSEGKRLYTTNADGELI 209 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESSSCEEEEEETTTT--EEEEEECCC----------CTTCCCCEEETTTTEEEEECTTSEEE
T ss_pred CCceEEECCCCCEEEEEecCCCceEEEEcCCCC--ceEEEecCC----------CCccceEEECCCCCEEEEEcCCCeEE
Confidence 112345556776 555542333445566 3321 111 11100 11122 34567887544443 4678
Q ss_pred EEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecC
Q 009420 223 LFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITD 302 (535)
Q Consensus 223 ~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~ 302 (535)
+||..+.+-...++ .+...++.++ ...++-| .+..+|+.... ...+.+||+..
T Consensus 210 ~~d~~~~~~~~~~~-~~~~~~~~~~--~~~~~s~--------dg~~l~~~~~~----------------~~~v~~~d~~~ 262 (353)
T 3vgz_A 210 TIDTADNKILSRKK-LLDDGKEHFF--INISLDT--------ARQRAFITDSK----------------AAEVLVVDTRN 262 (353)
T ss_dssp EEETTTTEEEEEEE-CCCSSSCCCE--EEEEEET--------TTTEEEEEESS----------------SSEEEEEETTT
T ss_pred EEECCCCeEEEEEE-cCCCCCCccc--ceEEECC--------CCCEEEEEeCC----------------CCEEEEEECCC
Confidence 89999887554332 1111011111 1122222 13456665432 23455677653
Q ss_pred CCCCeeee-cCCCCceeceeEEccCCe-EEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccc
Q 009420 303 PTPTWVLE-TMPQPRVMGDMTLLPNGN-VLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHST 380 (535)
Q Consensus 303 ~~~~W~~~-~m~~~R~~~~~v~lpdG~-I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~ 380 (535)
.+.... +...++ +...-+||+ +|+.+..+ + .+.+||..+. +....-+. ...-+ .
T Consensus 263 --~~~~~~~~~~~~~---~~~~s~dg~~l~v~~~~~-~------------~v~~~d~~~~---~~~~~~~~--~~~~~-~ 318 (353)
T 3vgz_A 263 --GNILAKVAAPESL---AVLFNPARNEAYVTHRQA-G------------KVSVIDAKSY---KVVKTFDT--PTHPN-S 318 (353)
T ss_dssp --CCEEEEEECSSCC---CEEEETTTTEEEEEETTT-T------------EEEEEETTTT---EEEEEEEC--CSEEE-E
T ss_pred --CcEEEEEEcCCCc---eEEECCCCCEEEEEECCC-C------------eEEEEECCCC---eEEEEEec--CCCCC-e
Confidence 333222 443332 245568987 77765432 1 5789999887 54332111 22222 3
Q ss_pred eeecCCCc-EEEecCC
Q 009420 381 AVLLRDGR-VLVGGSN 395 (535)
Q Consensus 381 a~LlpDG~-V~v~GG~ 395 (535)
..+.+||+ +||+...
T Consensus 319 ~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 319 LALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEECTTSCEEEEEEEC
T ss_pred EEEcCCCCEEEEEEcc
Confidence 44679998 7777654
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.14 E-value=0.0016 Score=65.22 Aligned_cols=269 Identities=14% Similarity=0.075 Sum_probs=142.4
Q ss_pred ceeEEEECCCCCEEECccc------cccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCc-eecCCCCccccc
Q 009420 78 AHSVEYSVLTNEFRPLFVQ------SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDW-KEIDGLGARRWY 150 (535)
Q Consensus 78 ~~~~~yDp~t~~w~~~~~~------~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W-~~~~~m~~~R~y 150 (535)
..+.+||++|+++...-.. .-.+..+ ..+.++++|++... ...+.++|+. +.+- ..++....++
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~-i~~~~~~lyv~~~~---~~~v~viD~~---t~~~~~~i~~~~~p~-- 87 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQS-MVIRDGIGWIVVNN---SHVIFAIDIN---TFKEVGRITGFTSPR-- 87 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEEE-EEEETTEEEEEEGG---GTEEEEEETT---TCCEEEEEECCSSEE--
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccceE-EEEECCEEEEEEcC---CCEEEEEECc---ccEEEEEcCCCCCCc--
Confidence 4689999999998753210 0112222 23457889988643 3679999998 5554 2233333333
Q ss_pred ceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCee-eeccccccCCccccCCCcceEEEeeCCcEEEEe---cCeEEEEE
Q 009420 151 ATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVY-SLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFA---NNRAILFD 225 (535)
Q Consensus 151 ~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~g---g~~~~~yD 225 (535)
..+.-.||++||....+ ..+.++ +.+. +.. ..+.-.. ......|...+..+++||+.. ++.+.++|
T Consensus 88 -~i~~~~~g~lyv~~~~~-~~v~~iD~~t~--~~~~~i~~g~~-----~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 88 -YIHFLSDEKAYVTQIWD-YRIFIINPKTY--EITGYIECPDM-----DMESGSTEQMVQYGKYVYVNCWSYQNRILKID 158 (328)
T ss_dssp -EEEEEETTEEEEEEBSC-SEEEEEETTTT--EEEEEEECTTC-----CTTTCBCCCEEEETTEEEEEECTTCCEEEEEE
T ss_pred -EEEEeCCCeEEEEECCC-CeEEEEECCCC--eEEEEEEcCCc-----cccCCCcceEEEECCEEEEEcCCCCCEEEEEE
Confidence 33443689999987432 345555 4432 111 1111000 000013544455788999985 45788999
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCC
Q 009420 226 YVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTP 305 (535)
Q Consensus 226 p~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~ 305 (535)
+++++..+.++. . ..| .+.+ +- .+|++|++.-..... ..|......+.+||+.. .
T Consensus 159 ~~t~~~~~~i~~---g---~~p-~~i~-~~---------~dG~l~v~~~~~~~~------~~~~~~~~~v~~id~~t--~ 213 (328)
T 3dsm_A 159 TETDKVVDELTI---G---IQP-TSLV-MD---------KYNKMWTITDGGYEG------SPYGYEAPSLYRIDAET--F 213 (328)
T ss_dssp TTTTEEEEEEEC---S---SCB-CCCE-EC---------TTSEEEEEBCCBCTT------CSSCBCCCEEEEEETTT--T
T ss_pred CCCCeEEEEEEc---C---CCc-cceE-Ec---------CCCCEEEEECCCccC------CccccCCceEEEEECCC--C
Confidence 999987754431 1 112 1222 21 278998876432100 00111235778888763 4
Q ss_pred Ceeee-cCCCCceeceeEEccCC-eEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCC-Cccccccee
Q 009420 306 TWVLE-TMPQPRVMGDMTLLPNG-NVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTI-PRMYHSTAV 382 (535)
Q Consensus 306 ~W~~~-~m~~~R~~~~~v~lpdG-~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~-~R~yhs~a~ 382 (535)
+.... .++....-.+.++-||| ++|+.++ .+.+||+++. +.....-.+. ...-.+ ..
T Consensus 214 ~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----------------~v~~~d~~t~---~~~~~~~~~~~~~~p~g-i~ 273 (328)
T 3dsm_A 214 TVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----------------DIWRMPVEAD---RVPVRPFLEFRDTKYYG-LT 273 (328)
T ss_dssp EEEEEEECCTTCCCEEEEECTTSCEEEEESS----------------SEEEEETTCS---SCCSSCSBCCCSSCEEE-EE
T ss_pred eEEEEEecCCCCCceeEEEecCCCEEEEEcc----------------EEEEEECCCC---ceeeeeeecCCCCceEE-EE
Confidence 44333 44433222334455654 5666543 3578999887 5422111111 122223 34
Q ss_pred ecC-CCcEEEecCCCCccccccCCCCCceeeEEEEcCC
Q 009420 383 LLR-DGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPY 419 (535)
Q Consensus 383 Llp-DG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Pp 419 (535)
+-| +|+|||+.... |-...+|.+|+|.
T Consensus 274 vdp~~g~lyva~~~~----------y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 274 VNPNNGEVYVADAID----------YQQQGIVYRYSPQ 301 (328)
T ss_dssp ECTTTCCEEEEECTT----------SSSEEEEEEECTT
T ss_pred EcCCCCeEEEEcccc----------cccCCEEEEECCC
Confidence 556 79999997321 1124478888876
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.11 E-value=0.0022 Score=62.84 Aligned_cols=261 Identities=10% Similarity=0.110 Sum_probs=137.5
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeE
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKI 125 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v 125 (535)
-++|+.++.|+.+ | .+.+||..+++....-..+.......+..+||+++++|+.+ ..+
T Consensus 32 s~~~~~l~s~~~d----------g---------~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i 89 (312)
T 4ery_A 32 SPNGEWLASSSAD----------K---------LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD---KTL 89 (312)
T ss_dssp CTTSSEEEEEETT----------S---------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEE
T ss_pred CCCCCEEEEeeCC----------C---------eEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC---CEE
Confidence 3688888887744 2 47899998888765433333333344566899999999874 579
Q ss_pred EEEcCCCCCCCCceecCCCCccc-ccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCee-eeccccccCCccccCCCc
Q 009420 126 RSFVPCNDESCDWKEIDGLGARR-WYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVY-SLPFLVQTNDPRVENNLY 202 (535)
Q Consensus 126 ~~ydp~~~~~~~W~~~~~m~~~R-~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~~y 202 (535)
.+||.. +.+-. ..+.... .-.+...-++++.++.|+.++ .+.+| .... +.. .++ .... .-
T Consensus 90 ~vwd~~---~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~--~~~~~~~---~~~~------~v 152 (312)
T 4ery_A 90 KIWDVS---SGKCL--KTLKGHSNYVFCCNFNPQSNLIVSGSFDE-SVRIWDVKTG--KCLKTLP---AHSD------PV 152 (312)
T ss_dssp EEEETT---TCCEE--EEEECCSSCEEEEEECSSSSEEEEEETTS-CEEEEETTTC--CEEEEEC---CCSS------CE
T ss_pred EEEECC---CCcEE--EEEcCCCCCEEEEEEcCCCCEEEEEeCCC-cEEEEECCCC--EEEEEec---CCCC------cE
Confidence 999987 44321 1111111 112344556889999888765 45666 3321 111 111 1000 00
Q ss_pred ceEEEeeCCcEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcc
Q 009420 203 PFVFLNVDGFLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAY 280 (535)
Q Consensus 203 p~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~ 280 (535)
-.....++|++++.|+ ..+.+||..+.+....+. .. .. .....+... .+++.+++|+.+.
T Consensus 153 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--~~---~~----~~~~~~~~~------~~~~~l~~~~~d~--- 214 (312)
T 4ery_A 153 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI--DD---DN----PPVSFVKFS------PNGKYILAATLDN--- 214 (312)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--CS---SC----CCEEEEEEC------TTSSEEEEEETTT---
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEe--cc---CC----CceEEEEEC------CCCCEEEEEcCCC---
Confidence 1233456898888876 458899998876543221 11 11 111111111 2677788877541
Q ss_pred cccccccccccCCceEEEEecCCCCCeeeec-CCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCC
Q 009420 281 EQAEKGVFVAALNTCARIKITDPTPTWVLET-MPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDN 359 (535)
Q Consensus 281 ~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~-m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t 359 (535)
.+..||+........... .............++++.++.|+.+ + .+.+||..+
T Consensus 215 -------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-g------------~i~vwd~~~ 268 (312)
T 4ery_A 215 -------------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED-N------------LVYIWNLQT 268 (312)
T ss_dssp -------------EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT-S------------CEEEEETTT
T ss_pred -------------eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC-C------------EEEEEECCC
Confidence 233445432100001111 1111111122344688888888765 2 478999887
Q ss_pred CCCCce-eecCCCCCCcccccceeecCCCcEEEecCC
Q 009420 360 IPGSRF-DLQNPSTIPRMYHSTAVLLRDGRVLVGGSN 395 (535)
Q Consensus 360 ~~g~~W-t~~~~~~~~R~yhs~a~LlpDG~V~v~GG~ 395 (535)
. +- ..+... .... ......|++.+++.++.
T Consensus 269 ~---~~~~~~~~h-~~~v--~~~~~~p~~~~l~s~~~ 299 (312)
T 4ery_A 269 K---EIVQKLQGH-TDVV--ISTACHPTENIIASAAL 299 (312)
T ss_dssp C---CEEEEECCC-SSCE--EEEEECSSSSEEEEEEC
T ss_pred c---hhhhhhhcc-CCcE--EEEeecCcCCceEEEEc
Confidence 6 32 222211 1111 12345689999988864
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.01 E-value=0.0044 Score=61.58 Aligned_cols=246 Identities=11% Similarity=0.078 Sum_probs=130.1
Q ss_pred eeEEEECCCCCEEECcc--ccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCc-ccccceEEE
Q 009420 79 HSVEYSVLTNEFRPLFV--QSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGA-RRWYATDHI 155 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~--~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~-~R~y~s~~~ 155 (535)
.+.+||..+++...... .+.....+..+.+++.+++.|+.+ ..+++||.. +.+-.. .+.. .....+++.
T Consensus 59 ~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D---~~i~lWd~~---~~~~~~--~~~~~~~~~~~~~~ 130 (321)
T 3ow8_A 59 LVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD---AHIRLWDLE---NGKQIK--SIDAGPVDAWTLAF 130 (321)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT---TTEEEE--EEECCTTCCCCEEE
T ss_pred CEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECC---CCCEEE--EEeCCCccEEEEEE
Confidence 46788877765443221 122222223345688899998874 679999987 433211 1111 111224566
Q ss_pred ecCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEE
Q 009420 156 LPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVK 233 (535)
Q Consensus 156 L~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~ 233 (535)
-+||+.++.|+.++ .+.+|.......-..+. .. . ...-.....|||+.++.|+ ..+.+||..+++-..
T Consensus 131 spdg~~l~~g~~dg-~v~i~~~~~~~~~~~~~---~~-~-----~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~ 200 (321)
T 3ow8_A 131 SPDSQYLATGTHVG-KVNIFGVESGKKEYSLD---TR-G-----KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH 200 (321)
T ss_dssp CTTSSEEEEECTTS-EEEEEETTTCSEEEEEE---CS-S-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCCEEEEEcCCC-cEEEEEcCCCceeEEec---CC-C-----ceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 77999999998764 45666222111111111 10 0 0011234567999888876 468899999887554
Q ss_pred ecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cC
Q 009420 234 QYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TM 312 (535)
Q Consensus 234 ~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m 312 (535)
.+ ... . .+. -+.... .+++++++|+.+. .+..+|+.. .+.... .-
T Consensus 201 ~~---~~h--~-~~v-~~l~~s---------pd~~~l~s~s~dg----------------~i~iwd~~~--~~~~~~~~~ 246 (321)
T 3ow8_A 201 TL---EGH--A-MPI-RSLTFS---------PDSQLLVTASDDG----------------YIKIYDVQH--ANLAGTLSG 246 (321)
T ss_dssp EE---CCC--S-SCC-CEEEEC---------TTSCEEEEECTTS----------------CEEEEETTT--CCEEEEECC
T ss_pred EE---ccc--C-Cce-eEEEEc---------CCCCEEEEEcCCC----------------eEEEEECCC--cceeEEEcC
Confidence 33 221 1 110 112222 2788889888652 233455432 111111 11
Q ss_pred CCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCcee-ecCCCCCCcccccceeecCCCcEEE
Q 009420 313 PQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFD-LQNPSTIPRMYHSTAVLLRDGRVLV 391 (535)
Q Consensus 313 ~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~~~R~yhs~a~LlpDG~V~v 391 (535)
...... +...-|||+.++.|+.+ + ++.+||..+. +-. .+... .... ......+||+.++
T Consensus 247 h~~~v~-~~~~sp~~~~l~s~s~D-~------------~v~iwd~~~~---~~~~~~~~h-~~~v--~~v~~s~~g~~l~ 306 (321)
T 3ow8_A 247 HASWVL-NVAFCPDDTHFVSSSSD-K------------SVKVWDVGTR---TCVHTFFDH-QDQV--WGVKYNGNGSKIV 306 (321)
T ss_dssp CSSCEE-EEEECTTSSEEEEEETT-S------------CEEEEETTTT---EEEEEECCC-SSCE--EEEEECTTSSEEE
T ss_pred CCCceE-EEEECCCCCEEEEEeCC-C------------cEEEEeCCCC---EEEEEEcCC-CCcE--EEEEECCCCCEEE
Confidence 222222 23456899999998865 2 5789998776 422 22111 1111 1244578999999
Q ss_pred ecCCC
Q 009420 392 GGSNP 396 (535)
Q Consensus 392 ~GG~~ 396 (535)
+||..
T Consensus 307 s~~~d 311 (321)
T 3ow8_A 307 SVGDD 311 (321)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 98853
No 23
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.91 E-value=0.0031 Score=63.00 Aligned_cols=261 Identities=14% Similarity=0.181 Sum_probs=133.3
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEE
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIR 126 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~ 126 (535)
+++++++.|+.+ | .+.+||..+.+-...-..+.....+.++.++|+++++||.+ ..+.
T Consensus 65 ~d~~~l~s~s~D----------g---------~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---~~v~ 122 (340)
T 1got_B 65 TDSRLLLSASQD----------G---------KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD---NICS 122 (340)
T ss_dssp TTSSEEEEEETT----------T---------EEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT---CEEE
T ss_pred CCCCEEEEEeCC----------C---------cEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC---CeEE
Confidence 578877777643 2 57899988876443322233333334566899999999874 6789
Q ss_pred EEcCCCCCCCC--ceecCCCCccc-ccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCc
Q 009420 127 SFVPCNDESCD--WKEIDGLGARR-WYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLY 202 (535)
Q Consensus 127 ~ydp~~~~~~~--W~~~~~m~~~R-~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~y 202 (535)
+||.. +.. ......+.... .-..+....+++ ++.|+.+ ..+.+| ..+. ... ..+..... .-
T Consensus 123 iw~~~---~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d-~~i~~wd~~~~--~~~--~~~~~h~~------~v 187 (340)
T 1got_B 123 IYNLK---TREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD-TTCALWDIETG--QQT--TTFTGHTG------DV 187 (340)
T ss_dssp EEETT---TCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETT-SCEEEEETTTT--EEE--EEECCCSS------CE
T ss_pred EEECc---cCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECC-CcEEEEECCCC--cEE--EEEcCCCC------ce
Confidence 99986 322 11111111111 111233344566 4555544 346666 3321 111 11111100 01
Q ss_pred ceEEEeeCCcEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcc
Q 009420 203 PFVFLNVDGFLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAY 280 (535)
Q Consensus 203 p~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~ 280 (535)
-.+...++|++++.|+ ..+.+||..+.+-...+ ... . +...-+... .+++.+++|+.+.
T Consensus 188 ~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~---~~h--~-----~~v~~v~~~------p~~~~l~s~s~d~--- 248 (340)
T 1got_B 188 MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF---TGH--E-----SDINAICFF------PNGNAFATGSDDA--- 248 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE---CCC--S-----SCEEEEEEC------TTSSEEEEEETTS---
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEE---cCC--c-----CCEEEEEEc------CCCCEEEEEcCCC---
Confidence 1234567899888886 46889999887644322 211 1 111111111 2678888888652
Q ss_pred cccccccccccCCceEEEEecCCCCCeeee-cCCC-CceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCC
Q 009420 281 EQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQ-PRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPD 358 (535)
Q Consensus 281 ~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~-~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~ 358 (535)
.+..+|+.. .+-... .... ...-.....-|||+++++|+.+ + .+.+||..
T Consensus 249 -------------~v~iwd~~~--~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~ 300 (340)
T 1got_B 249 -------------TCRLFDLRA--DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-F------------NCNVWDAL 300 (340)
T ss_dssp -------------CEEEEETTT--TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-S------------EEEEEETT
T ss_pred -------------cEEEEECCC--CcEEEEEccCCcccceEEEEECCCCCEEEEECCC-C------------eEEEEEcc
Confidence 233445432 111111 1111 0011223456899999998765 2 57899987
Q ss_pred CCCCCceeecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 359 NIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 359 t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
+. +.-..+... ..+. .+....|||+.+++||.+
T Consensus 301 ~~--~~~~~~~~h-~~~v--~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 301 KA--DRAGVLAGH-DNRV--SCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp TC--CEEEEEECC-SSCE--EEEEECTTSSCEEEEETT
T ss_pred cC--cEeeEeecC-CCcE--EEEEEcCCCCEEEEEcCC
Confidence 65 122222211 1111 133456899999999864
No 24
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.90 E-value=0.0046 Score=61.50 Aligned_cols=151 Identities=10% Similarity=0.060 Sum_probs=87.1
Q ss_pred EeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc--cccccccceecCCCcEEEEcCCCCCC
Q 009420 45 LLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ--SNVWCSSGAVRPDGVLIQTGGFNDGE 122 (535)
Q Consensus 45 ~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~ 122 (535)
.-+++++++.|+.+ | .+.+||..++++..+... +.....+..+.++|+++++|+.+
T Consensus 16 ~s~~~~~l~~~~~d----------~---------~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--- 73 (372)
T 1k8k_C 16 WNKDRTQIAICPNN----------H---------EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD--- 73 (372)
T ss_dssp ECTTSSEEEEECSS----------S---------EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT---
T ss_pred ECCCCCEEEEEeCC----------C---------EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC---
Confidence 34789988888643 2 578999999987665432 22222334466799999998863
Q ss_pred CeEEEEcCCCCCCCCceecCCC-CcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCC
Q 009420 123 KKIRSFVPCNDESCDWKEIDGL-GARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENN 200 (535)
Q Consensus 123 ~~v~~ydp~~~~~~~W~~~~~m-~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~ 200 (535)
..+.+||.. +.++.....+ .....-.+++..++|+.+++|+.++ .+.+| .... ..+.....+..... .
T Consensus 74 g~i~vwd~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~v~i~d~~~~-~~~~~~~~~~~~~~-----~ 143 (372)
T 1k8k_C 74 RNAYVWTLK---GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR-VISICYFEQE-NDWWVCKHIKKPIR-----S 143 (372)
T ss_dssp SCEEEEEEE---TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS-SEEEEEEETT-TTEEEEEEECTTCC-----S
T ss_pred CeEEEEECC---CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC-EEEEEEecCC-CcceeeeeeecccC-----C
Confidence 568899987 5655443222 1222233455566899999988764 34555 3221 12221111101000 0
Q ss_pred CcceEEEeeCCcEEEEec--CeEEEEECC
Q 009420 201 LYPFVFLNVDGFLFIFAN--NRAILFDYV 227 (535)
Q Consensus 201 ~yp~~~~~~dG~ifv~gg--~~~~~yDp~ 227 (535)
.--.....++|+.++.|+ ..+.+||..
T Consensus 144 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 144 TVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred CeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 011234456888888876 457889954
No 25
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.81 E-value=0.0028 Score=63.09 Aligned_cols=149 Identities=9% Similarity=-0.008 Sum_probs=78.7
Q ss_pred eeEEEECCCCCEEECcccc-ccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCc-ccccceEEEe
Q 009420 79 HSVEYSVLTNEFRPLFVQS-NVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGA-RRWYATDHIL 156 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~-~R~y~s~~~L 156 (535)
.+..+|+++++++.+.... ...-...++-+||+||+++.. .....+.+||.. +.+++.+..+.. ...-...+.-
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~-~~~~~v~~~~~~---~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKE-DDEGGIAAWQID---GQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEE-TTEEEEEEEEEE---TTEEEEEEEEEEESCCCSEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEec-CCCceEEEEEec---CCcEEEeeeeecCCCCCEEEEEC
Confidence 5677889999988764322 122223445679998777532 113578899986 666655543222 2222345666
Q ss_pred cCCcEEEEcCccCCeeEEE-eCCCCCCeeeecccccc-CCcc-ccCCCcce-EEEeeCCcEEEEe--cCeEEEEECC-CC
Q 009420 157 PDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQT-NDPR-VENNLYPF-VFLNVDGFLFIFA--NNRAILFDYV-NN 229 (535)
Q Consensus 157 ~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~-~~~~-~~~~~yp~-~~~~~dG~ifv~g--g~~~~~yDp~-t~ 229 (535)
+||+.+++.+.....+.+| ...+ .....+..+... .... ......++ +...|||++|+.. ++.+.+||.. ++
T Consensus 95 pdg~~l~~~~~~~~~v~v~~~~~~-g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g 173 (347)
T 3hfq_A 95 EARQLVYSANYHKGTAEVMKIAAD-GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG 173 (347)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTT-SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS
T ss_pred CCCCEEEEEeCCCCEEEEEEeCCC-CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC
Confidence 7898555555444566677 3321 122111111000 0000 00011233 4566899977765 3568889987 45
Q ss_pred eEE
Q 009420 230 KVV 232 (535)
Q Consensus 230 ~W~ 232 (535)
+..
T Consensus 174 ~~~ 176 (347)
T 3hfq_A 174 QLS 176 (347)
T ss_dssp CEE
T ss_pred cEE
Confidence 443
No 26
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.77 E-value=0.0039 Score=63.85 Aligned_cols=254 Identities=12% Similarity=0.045 Sum_probs=121.6
Q ss_pred eeEEEECCCCCEEECccc-----cccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceE
Q 009420 79 HSVEYSVLTNEFRPLFVQ-----SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATD 153 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~-----~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~ 153 (535)
.+.+||+.+++....... +.....+.++.++|++++.|+.. ..+.+||.. +.+....-. .....-.+.
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~v~~~d~~---~~~~~~~~~-~~~~~~~~~ 217 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA---NAVHVFDLK---TLAYKATVD-LTGKWSKIL 217 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG---TEEEEEETT---TCCEEEEEE-CSSSSEEEE
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC---CEEEEEECC---CceEEEEEc-CCCCCeeEE
Confidence 478999999887653211 11122223445689999998753 579999987 443221111 011122244
Q ss_pred EEecCCcEEEEcCccCCeeEEE-eCCCCCCee-eeccccccCCccccCCCcce-EEEeeCCcEEEEec----------Ce
Q 009420 154 HILPDGRIIIIGGRRQFNYEFY-PKNGAPNVY-SLPFLVQTNDPRVENNLYPF-VFLNVDGFLFIFAN----------NR 220 (535)
Q Consensus 154 ~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~~yp~-~~~~~dG~ifv~gg----------~~ 220 (535)
+.-+||+.+++.+.....+.+| ..+. +.. .++. ...+. +...++|+.+++++ ..
T Consensus 218 ~~~~~~~~l~~~~~~~~~i~~~d~~~~--~~~~~~~~-----------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~ 284 (433)
T 3bws_A 218 LYDPIRDLVYCSNWISEDISVIDRKTK--LEIRKTDK-----------IGLPRGLLLSKDGKELYIAQFSASNQESGGGR 284 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTT--EEEEECCC-----------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEE
T ss_pred EEcCCCCEEEEEecCCCcEEEEECCCC--cEEEEecC-----------CCCceEEEEcCCCCEEEEEECCCCccccCCCe
Confidence 5556776554444333456667 3331 111 1110 01122 34456886555544 25
Q ss_pred EEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCc-EEEEEcCCCCCcccccccccccccCCceEEEE
Q 009420 221 AILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAA-EVLVCGGAPKGAYEQAEKGVFVAALNTCARIK 299 (535)
Q Consensus 221 ~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~g-kIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d 299 (535)
+.+||+.+++...... .+. .+ ...+.-| ++ .+|+.++.+ ..+..||
T Consensus 285 i~~~d~~~~~~~~~~~-~~~-----~~--~~~~~~~---------~g~~l~~~~~~~----------------~~v~v~d 331 (433)
T 3bws_A 285 LGIYSMDKEKLIDTIG-PPG-----NK--RHIVSGN---------TENKIYVSDMCC----------------SKIEVYD 331 (433)
T ss_dssp EEEEETTTTEEEEEEE-EEE-----CE--EEEEECS---------STTEEEEEETTT----------------TEEEEEE
T ss_pred EEEEECCCCcEEeecc-CCC-----Cc--ceEEECC---------CCCEEEEEecCC----------------CEEEEEE
Confidence 6799998887553221 111 10 1112211 44 677776643 2344566
Q ss_pred ecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCCCCCCC--CcccCCCCccccEEEeCCCCCCCceeecCCCCCCcc
Q 009420 300 ITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGAGKGTA--GWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRM 376 (535)
Q Consensus 300 ~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~--g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~ 376 (535)
+.. .+.. .++....-...+.-|||+.+++++...+.. .+-.....--.+.+||..+. +....-.. ...
T Consensus 332 ~~~----~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~---~~~~~~~~--~~~ 402 (433)
T 3bws_A 332 LKE----KKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD---TVKEFWEA--GNQ 402 (433)
T ss_dssp TTT----TEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT---EEEEEEEC--SSS
T ss_pred CCC----CcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC---cEEEEecC--CCC
Confidence 542 2221 111111122445668998666655431100 00000000015789999886 54322111 111
Q ss_pred cccceeecCCCcEEEecCC
Q 009420 377 YHSTAVLLRDGRVLVGGSN 395 (535)
Q Consensus 377 yhs~a~LlpDG~V~v~GG~ 395 (535)
-....+.|||+.+++++.
T Consensus 403 -~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 403 -PTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp -EEEEEECTTSCEEEEEET
T ss_pred -CceEEEcCCCCEEEEEEC
Confidence 123445789988776653
No 27
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.73 E-value=0.0038 Score=61.10 Aligned_cols=205 Identities=14% Similarity=0.122 Sum_probs=112.3
Q ss_pred eeEEEECCCCC--EEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEe
Q 009420 79 HSVEYSVLTNE--FRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHIL 156 (535)
Q Consensus 79 ~~~~yDp~t~~--w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L 156 (535)
.+.++|++|++ |+.-... ...++...+++||++++.+ .+.+..|||. +.-.|+.-.+-. ...+++..+
T Consensus 16 ~v~~~d~~tG~~~w~~~~~~-~~~~~~~~~~pdG~ilvs~-----~~~V~~~d~~--G~~~W~~~~~~~--~~~~~~~~~ 85 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPLEK-GWECNSVAATKAGEILFSY-----SKGAKMITRD--GRELWNIAAPAG--CEMQTARIL 85 (276)
T ss_dssp EEEEEETTTTEEEEEEECCT-TCCCCEEEECTTSCEEEEC-----BSEEEEECTT--SCEEEEEECCTT--CEEEEEEEC
T ss_pred EEEEEECCCCeEEEEeCCCc-cCCCcCeEECCCCCEEEeC-----CCCEEEECCC--CCEEEEEcCCCC--ccccccEEC
Confidence 57789998887 4432211 1234555678899999943 2568999995 244676543211 123467788
Q ss_pred cCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEe--cCeEEEEECCCCe-EE
Q 009420 157 PDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFA--NNRAILFDYVNNK-VV 232 (535)
Q Consensus 157 ~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~g--g~~~~~yDp~t~~-W~ 232 (535)
+||++++....+...+-.+ |..+ .-|. .+.-..... .......+...++|++++.. +..+.+||++.+. |.
T Consensus 86 ~dG~~lv~~~~~~~~v~~vd~~Gk-~l~~-~~~~~~~~~---~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~ 160 (276)
T 3no2_A 86 PDGNALVAWCGHPSTILEVNMKGE-VLSK-TEFETGIER---PHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNS 160 (276)
T ss_dssp TTSCEEEEEESTTEEEEEECTTSC-EEEE-EEECCSCSS---GGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCCEEEEecCCCCEEEEEeCCCC-EEEE-EeccCCCCc---ccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEE
Confidence 9999999865422223333 3211 1122 111000000 00112234567899988875 3568899998432 44
Q ss_pred EecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee--
Q 009420 233 KQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-- 310 (535)
Q Consensus 233 ~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-- 310 (535)
... +. .| .+ +..++ ++.+++++... ..+..+|+.+..-.|+..
T Consensus 161 ~~~---~~-----~~-~~-~~~~~---------~g~~~v~~~~~----------------~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 161 VKL---SG-----TP-FS-SAFLD---------NGDCLVACGDA----------------HCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp EEC---SS-----CC-CE-EEECT---------TSCEEEECBTT----------------SEEEEECTTTCCEEEEEEGG
T ss_pred EEC---CC-----Cc-cc-eeEcC---------CCCEEEEeCCC----------------CeEEEEeCcCCcEEEEecCC
Confidence 221 11 11 12 23322 78888876543 135567766545668875
Q ss_pred cCCCCce--eceeEEccCCeEEEEc
Q 009420 311 TMPQPRV--MGDMTLLPNGNVLLIN 333 (535)
Q Consensus 311 ~m~~~R~--~~~~v~lpdG~I~vvG 333 (535)
..+..|. ..++.+++||.|||..
T Consensus 206 ~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 206 DIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp GSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCCCccccccccceEcCCCCEEEEe
Confidence 3332231 3455778999999987
No 28
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.73 E-value=0.007 Score=59.04 Aligned_cols=260 Identities=13% Similarity=0.097 Sum_probs=137.5
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEEC-cc----ccccccccceecCCCcEEEEcCCCC
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPL-FV----QSNVWCSSGAVRPDGVLIQTGGFND 120 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~-~~----~~~~~c~~~~~l~dG~l~v~GG~~~ 120 (535)
-+++++++.++ + | .+.+||..+++.... .. .+.....+.+..++|+.+++|+.+
T Consensus 60 ~~~~~~l~~~~-d----------g---------~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 118 (337)
T 1gxr_A 60 SNPTRHVYTGG-K----------G---------CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA- 118 (337)
T ss_dssp CSSSSEEEEEC-B----------S---------EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS-
T ss_pred ecCCcEEEEcC-C----------C---------eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC-
Confidence 36888887776 3 1 478999887653211 11 122223334566799999998763
Q ss_pred CCCeEEEEcCCCCCCCCceecCCCCcc-cccceEEEecCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccC
Q 009420 121 GEKKIRSFVPCNDESCDWKEIDGLGAR-RWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVEN 199 (535)
Q Consensus 121 g~~~v~~ydp~~~~~~~W~~~~~m~~~-R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~ 199 (535)
..+.+||.. +.+......+... ..-.+.+..++++.+++|+.++ .+.+|..... +.. ..+....
T Consensus 119 --~~i~~~d~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-~v~~~d~~~~-~~~--~~~~~~~------ 183 (337)
T 1gxr_A 119 --STLSIWDLA---APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-NIAVWDLHNQ-TLV--RQFQGHT------ 183 (337)
T ss_dssp --SEEEEEECC---CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS-CEEEEETTTT-EEE--EEECCCS------
T ss_pred --CcEEEEECC---CCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC-cEEEEeCCCC-cee--eeeeccc------
Confidence 579999987 5554333222211 1122445566889999888764 3556622211 111 1111100
Q ss_pred CCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCC
Q 009420 200 NLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPK 277 (535)
Q Consensus 200 ~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~ 277 (535)
..--.....++|+.++.++ ..+.+||.++.+-..... .+. .. ...... .+++.+++|+.+.
T Consensus 184 ~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~---~v----~~~~~s---------~~~~~l~~~~~~~ 246 (337)
T 1gxr_A 184 DGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTS---QI----FSLGYC---------PTGEWLAVGMESS 246 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSS---CE----EEEEEC---------TTSSEEEEEETTS
T ss_pred CceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCC---ce----EEEEEC---------CCCCEEEEEcCCC
Confidence 0011234456888888775 467899998877553221 111 11 112221 2677888877541
Q ss_pred CcccccccccccccCCceEEEEecCCCCCeeeecCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeC
Q 009420 278 GAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRP 357 (535)
Q Consensus 278 ~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP 357 (535)
.+..||+... ...+ ..-..... ......|||+.+++++.+ + .+.+||.
T Consensus 247 ----------------~i~~~~~~~~-~~~~-~~~~~~~v-~~~~~~~~~~~l~~~~~d-g------------~i~~~~~ 294 (337)
T 1gxr_A 247 ----------------NVEVLHVNKP-DKYQ-LHLHESCV-LSLKFAYCGKWFVSTGKD-N------------LLNAWRT 294 (337)
T ss_dssp ----------------CEEEEETTSS-CEEE-ECCCSSCE-EEEEECTTSSEEEEEETT-S------------EEEEEET
T ss_pred ----------------cEEEEECCCC-CeEE-EcCCccce-eEEEECCCCCEEEEecCC-C------------cEEEEEC
Confidence 2445555431 1111 11112222 234567899999988754 2 4689998
Q ss_pred CCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 358 DNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 358 ~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
.+. +-..... .... -....+.+||+.+++|+..
T Consensus 295 ~~~---~~~~~~~--~~~~-v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 295 PYG---ASIFQSK--ESSS-VLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp TTC---CEEEEEE--CSSC-EEEEEECTTSCEEEEEETT
T ss_pred CCC---eEEEEec--CCCc-EEEEEECCCCCEEEEecCC
Confidence 876 4321111 1111 1124467899999998854
No 29
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.70 E-value=0.0047 Score=61.50 Aligned_cols=144 Identities=12% Similarity=0.107 Sum_probs=76.4
Q ss_pred eeEEEECCCCCEEECccc----cccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCC--CCCceecCCCCc-ccccc
Q 009420 79 HSVEYSVLTNEFRPLFVQ----SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDE--SCDWKEIDGLGA-RRWYA 151 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~----~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~--~~~W~~~~~m~~-~R~y~ 151 (535)
.+.+||..++.++..... +.....+.++-++|++++.|+.+ ..+++||..... ..++..+..+.. ...-.
T Consensus 35 ~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D---~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 111 (330)
T 2hes_X 35 KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD---STVSIWAKEESADRTFEMDLLAIIEGHENEVK 111 (330)
T ss_dssp CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT---SCEEEEEC-------CCCEEEEEEC----CEE
T ss_pred EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC---CcEEEEEcccCcCccccceeEEEEcCCCCcEE
Confidence 478899988765443322 22222334466799999999874 578999875100 112322222211 11122
Q ss_pred eEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCC
Q 009420 152 TDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVN 228 (535)
Q Consensus 152 s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t 228 (535)
+++.-+||+.++.|+.++ ++.+| .......+.....+..... .--.+...|+|++++.|+ ..+.+||..+
T Consensus 112 ~v~~sp~g~~las~s~D~-~v~iwd~~~~~~~~~~~~~~~~h~~------~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 112 GVAWSNDGYYLATCSRDK-SVWIWETDESGEEYECISVLQEHSQ------DVKHVIWHPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp EEEECTTSCEEEEEETTS-CEEEEECCTTCCCCEEEEEECCCSS------CEEEEEECSSSSEEEEEETTSCEEEEEEET
T ss_pred EEEECCCCCEEEEEeCCC-EEEEEeccCCCCCeEEEEEeccCCC------ceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 445556899999888764 46667 3221112222211211110 001123357898888876 4578899888
Q ss_pred CeEE
Q 009420 229 NKVV 232 (535)
Q Consensus 229 ~~W~ 232 (535)
+.|.
T Consensus 185 ~~~~ 188 (330)
T 2hes_X 185 DDWE 188 (330)
T ss_dssp TEEE
T ss_pred CCee
Confidence 7665
No 30
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.69 E-value=0.014 Score=58.75 Aligned_cols=265 Identities=15% Similarity=0.201 Sum_probs=135.1
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEE
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIR 126 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~ 126 (535)
++++.++.|+.+ | .+.+||..+.+....-..+..+-.+.++.++|..++.||.+ ..+.
T Consensus 74 ~d~~~l~s~s~D----------g---------~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d---~~i~ 131 (354)
T 2pbi_B 74 KDKRRIVSSSQD----------G---------KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD---NKCS 131 (354)
T ss_dssp TTSSEEEEEETT----------S---------EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT---SEEE
T ss_pred CCCCEEEEEeCC----------C---------eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC---CCEE
Confidence 577777777643 2 57899988877654333333333344567899999999974 5788
Q ss_pred EEcCCCCCCCCce-ecCCCCc-ccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcc
Q 009420 127 SFVPCNDESCDWK-EIDGLGA-RRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYP 203 (535)
Q Consensus 127 ~ydp~~~~~~~W~-~~~~m~~-~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp 203 (535)
+|+.......... ....+.. ...-.++...++++.++.|+.+ .++.+| ..+. +.. ..+..... . --
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D-~~v~lwd~~~~--~~~--~~~~~h~~-----~-v~ 200 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGD-GTCALWDVESG--QLL--QSFHGHGA-----D-VL 200 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETT-SEEEEEETTTC--CEE--EEEECCSS-----C-EE
T ss_pred EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCC-CcEEEEeCCCC--eEE--EEEcCCCC-----C-eE
Confidence 8887511000000 0001111 1111234445577777777665 356677 3321 111 11111000 0 00
Q ss_pred eEEEee--CCcEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCc
Q 009420 204 FVFLNV--DGFLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGA 279 (535)
Q Consensus 204 ~~~~~~--dG~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~ 279 (535)
.....+ +|++++.|+ ..+.+||.++.+....+ ... ... -.+....| +++.+++|+.+.
T Consensus 201 ~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~---~~h--~~~--v~~v~~~p---------~~~~l~s~s~D~-- 262 (354)
T 2pbi_B 201 CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF---ETH--ESD--VNSVRYYP---------SGDAFASGSDDA-- 262 (354)
T ss_dssp EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEE---CCC--SSC--EEEEEECT---------TSSEEEEEETTS--
T ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEe---cCC--CCC--eEEEEEeC---------CCCEEEEEeCCC--
Confidence 112233 578888876 46889999988765433 211 110 01122222 677888888652
Q ss_pred ccccccccccccCCceEEEEecCCCCCeeee-cCCCCc-eeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeC
Q 009420 280 YEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPR-VMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRP 357 (535)
Q Consensus 280 ~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R-~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP 357 (535)
.+..+|+.. .+-... ...... .-.....-|+|+++++|+.+ + ++.+||.
T Consensus 263 --------------~v~lwd~~~--~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-~------------~i~vwd~ 313 (354)
T 2pbi_B 263 --------------TCRLYDLRA--DREVAIYSKESIIFGASSVDFSLSGRLLFAGYND-Y------------TINVWDV 313 (354)
T ss_dssp --------------CEEEEETTT--TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-S------------CEEEEET
T ss_pred --------------eEEEEECCC--CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC-C------------cEEEEEC
Confidence 233445432 110011 111101 11123455799999988754 2 5789998
Q ss_pred CCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 358 DNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 358 ~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
.+. +.-..+... ..+ -....+.|||+.+++|+..
T Consensus 314 ~~~--~~~~~l~~h-~~~--v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 314 LKG--SRVSILFGH-ENR--VSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp TTC--SEEEEECCC-SSC--EEEEEECTTSSCEEEEETT
T ss_pred CCC--ceEEEEECC-CCc--EEEEEECCCCCEEEEEcCC
Confidence 665 122222211 111 1234567999999999864
No 31
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.68 E-value=0.01 Score=59.71 Aligned_cols=244 Identities=14% Similarity=0.139 Sum_probs=122.2
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcE-EEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEec
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVL-IQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l-~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~ 157 (535)
.+.+||..+++....-.... ...+.++.+||+. ++.|+.. ..+++||.. +.+... .+.....-.+++.-+
T Consensus 13 ~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d---~~i~v~d~~---~~~~~~--~~~~~~~v~~~~~sp 83 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHS---NDVSIIDTA---TNNVIA--TVPAGSSPQGVAVSP 83 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGG---TEEEEEETT---TTEEEE--EEECSSSEEEEEECT
T ss_pred EEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCC---CeEEEEECC---CCeEEE--EEECCCCccceEECC
Confidence 57899998887544322221 1233456678874 4665442 579999987 544322 222222233555667
Q ss_pred CCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcce-EEEeeCCc-EEEEec--CeEEEEECCCCeEE
Q 009420 158 DGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPF-VFLNVDGF-LFIFAN--NRAILFDYVNNKVV 232 (535)
Q Consensus 158 dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~-~~~~~dG~-ifv~gg--~~~~~yDp~t~~W~ 232 (535)
||+.+++++.....+.+| ..+. +.. ..+... ..+. ....++|+ ||+.+. +.+.+||..+++..
T Consensus 84 dg~~l~~~~~~~~~v~v~d~~~~--~~~--~~~~~~--------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 84 DGKQVYVTNMASSTLSVIDTTSN--TVA--GTVKTG--------KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTT--EEE--EEEECS--------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCC--eEE--EEEeCC--------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 888655555554567777 4331 111 111110 0122 34457887 556654 46889999988866
Q ss_pred EecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeecC
Q 009420 233 KQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETM 312 (535)
Q Consensus 233 ~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m 312 (535)
..+. .. . .+ ....+.| .+..||+.++.+ ..+..+|+.. .+.... .
T Consensus 152 ~~~~---~~--~-~~--~~~~~~~--------dg~~l~~~~~~~----------------~~v~~~d~~~--~~~~~~-~ 196 (391)
T 1l0q_A 152 NTVS---VG--R-SP--KGIAVTP--------DGTKVYVANFDS----------------MSISVIDTVT--NSVIDT-V 196 (391)
T ss_dssp EEEE---CC--S-SE--EEEEECT--------TSSEEEEEETTT----------------TEEEEEETTT--TEEEEE-E
T ss_pred EEEe---cC--C-Cc--ceEEECC--------CCCEEEEEeCCC----------------CEEEEEECCC--CeEEEE-E
Confidence 4332 11 1 11 1112212 134566666543 2345566542 221111 1
Q ss_pred CCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCcee-ecCCCCCCcccccceeecCCCc-EE
Q 009420 313 PQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFD-LQNPSTIPRMYHSTAVLLRDGR-VL 390 (535)
Q Consensus 313 ~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~~~R~yhs~a~LlpDG~-V~ 390 (535)
.....-.....-|||+.+++++.... -..+.+||..+. +-. .+... .. .....+.|||+ +|
T Consensus 197 ~~~~~~~~~~~~~~g~~l~~~~~~~~----------~~~v~~~d~~~~---~~~~~~~~~---~~-~~~~~~s~dg~~l~ 259 (391)
T 1l0q_A 197 KVEAAPSGIAVNPEGTKAYVTNVDKY----------FNTVSMIDTGTN---KITARIPVG---PD-PAGIAVTPDGKKVY 259 (391)
T ss_dssp ECSSEEEEEEECTTSSEEEEEEECSS----------CCEEEEEETTTT---EEEEEEECC---SS-EEEEEECTTSSEEE
T ss_pred ecCCCccceEECCCCCEEEEEecCcC----------CCcEEEEECCCC---eEEEEEecC---CC-ccEEEEccCCCEEE
Confidence 11111223456688987666653200 025789999876 432 22211 11 12345678997 55
Q ss_pred EecCC
Q 009420 391 VGGSN 395 (535)
Q Consensus 391 v~GG~ 395 (535)
++++.
T Consensus 260 ~s~~~ 264 (391)
T 1l0q_A 260 VALSF 264 (391)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 67654
No 32
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.67 E-value=0.005 Score=60.46 Aligned_cols=233 Identities=11% Similarity=0.060 Sum_probs=121.0
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEE
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIR 126 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~ 126 (535)
++|+.++.|+.+ | .+.+||..+++-...-..+.....+..+.++++++++|+.+ ..++
T Consensus 23 p~~~~l~s~~~d----------g---------~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---~~i~ 80 (304)
T 2ynn_A 23 PTEPWVLTTLYS----------G---------RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIR 80 (304)
T ss_dssp SSSSEEEEEETT----------S---------EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEE
T ss_pred CCCCEEEEEcCC----------C---------cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC---CEEE
Confidence 688888888754 2 57899998876433222222222334566799999999874 6799
Q ss_pred EEcCCCCCCCCceecCCCC-cccccceEEEecCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceE
Q 009420 127 SFVPCNDESCDWKEIDGLG-ARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFV 205 (535)
Q Consensus 127 ~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~ 205 (535)
+||.. +.+- +..+. ....-.+++.-++++.++.|+.++ ++.+|.... .+.....+..... .--.+
T Consensus 81 vwd~~---~~~~--~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~-~v~lWd~~~--~~~~~~~~~~h~~------~v~~v 146 (304)
T 2ynn_A 81 VFNYN---TGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGSDDL-TVKLWNWEN--NWALEQTFEGHEH------FVMCV 146 (304)
T ss_dssp EEETT---TCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTS-CEEEEEGGG--TTEEEEEECCCCS------CEEEE
T ss_pred EEECC---CCcE--EEEEeCCCCcEEEEEEcCCCCEEEEECCCC-eEEEEECCC--CcchhhhhcccCC------cEEEE
Confidence 99987 4432 11121 112223555667889988888764 456662211 1111111111100 00112
Q ss_pred EEee-CCcEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccc
Q 009420 206 FLNV-DGFLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQ 282 (535)
Q Consensus 206 ~~~~-dG~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~ 282 (535)
...| ++++++.|+ ..+.+||..+.+-...+ .....+.- ......|. .++++++.|+.+.
T Consensus 147 ~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~---~~~~~~~v---~~~~~~~~-------~~~~~l~s~s~D~----- 208 (304)
T 2ynn_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL---TTGQERGV---NYVDYYPL-------PDKPYMITASDDL----- 208 (304)
T ss_dssp EECTTCTTEEEEEETTSEEEEEETTCSSCSEEE---ECCCTTCE---EEEEECCS-------TTCCEEEEEETTS-----
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCCcccee---ccCCcCcE---EEEEEEEc-------CCCCEEEEEcCCC-----
Confidence 2334 678888775 46788998654311111 11100100 01112121 1567788887652
Q ss_pred cccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCC
Q 009420 283 AEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNI 360 (535)
Q Consensus 283 ~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~ 360 (535)
.+..+|+.. .+-... .-...... ..+.-|++++++.|+.+ + ++.+||..+.
T Consensus 209 -----------~i~iWd~~~--~~~~~~~~~h~~~v~-~~~~~p~~~~l~s~s~D-g------------~i~iWd~~~~ 260 (304)
T 2ynn_A 209 -----------TIKIWDYQT--KSCVATLEGHMSNVS-FAVFHPTLPIIISGSED-G------------TLKIWNSSTY 260 (304)
T ss_dssp -----------EEEEEETTT--TEEEEEEECCSSCEE-EEEECSSSSEEEEEETT-S------------CEEEEETTTC
T ss_pred -----------eEEEEeCCC--CccceeeCCCCCCEE-EEEECCCCCEEEEEcCC-C------------eEEEEECCCC
Confidence 233445432 111111 11222222 23457899999998865 2 5789998876
No 33
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.64 E-value=0.013 Score=57.83 Aligned_cols=287 Identities=8% Similarity=-0.007 Sum_probs=142.2
Q ss_pred eEEEE-eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCC
Q 009420 41 MHMQL-LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFN 119 (535)
Q Consensus 41 ~~~~~-~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~ 119 (535)
+.++. -++|+.++.|+.+ | .+.+||..+++-...-..+.....+.++.++|+.+++|+.+
T Consensus 35 v~~~~~s~~~~~l~~~~~d----------g---------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 95 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCSKD----------S---------SASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD 95 (369)
T ss_dssp EEEEEECTTSCEEEEEESS----------S---------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEcCCCCEEEEEeCC----------C---------EEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC
Confidence 33333 3688888888753 2 47899998876543322222222334466789999998873
Q ss_pred CCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCcc----CCeeEEE-eCCCC--CCeeeec--ccc
Q 009420 120 DGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRR----QFNYEFY-PKNGA--PNVYSLP--FLV 190 (535)
Q Consensus 120 ~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~----~~~~E~y-P~~~~--~~w~~~~--~l~ 190 (535)
..+.+||.. +.+.... +.....-.+++..++|+.+++++.+ ...+.+| ..... ....... .+.
T Consensus 96 ---g~i~iwd~~---~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 96 ---YSIKLWDVS---NGQCVAT--WKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp ---TEEEEEETT---TCCEEEE--EECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred ---CeEEEEECC---CCcEEEE--eecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence 579999987 4443222 1122223355666788988888765 1345555 22210 0110000 000
Q ss_pred ccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCC-CeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCc
Q 009420 191 QTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVN-NKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAA 267 (535)
Q Consensus 191 ~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t-~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~g 267 (535)
..... ............++|+.++.|+ ..+.+||..+ .+....+ ... . +...-+... .++
T Consensus 168 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~--~-----~~v~~~~~~------~~~ 230 (369)
T 3zwl_B 168 KIITH-EGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSI---DLH--E-----KSISDMQFS------PDL 230 (369)
T ss_dssp EEECC-TTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEE---ECC--S-----SCEEEEEEC------TTS
T ss_pred eccCC-cCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEE---ecC--C-----CceeEEEEC------CCC
Confidence 00000 0000112234557888888775 4578999988 4433222 111 1 111111111 267
Q ss_pred EEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeecCCCCceeceeEEccCCeEEEEcCCCCCCCCcc-cCC
Q 009420 268 EVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWE-LGR 346 (535)
Q Consensus 268 kIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~-~~~ 346 (535)
+.+++|+.+ ..+..+|+.. .+.... +............|+++.+++|+...+..-+. ...
T Consensus 231 ~~l~~~~~d----------------~~i~v~d~~~--~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 291 (369)
T 3zwl_B 231 TYFITSSRD----------------TNSFLVDVST--LQVLKK-YETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSAN 291 (369)
T ss_dssp SEEEEEETT----------------SEEEEEETTT--CCEEEE-EECSSCEEEEEECSSSSEEEEEECCC----------
T ss_pred CEEEEecCC----------------ceEEEEECCC--Cceeee-ecCCCCceeEEecCCCceEEEeecCCCceEEEEecC
Confidence 777777654 1244555542 121111 11112222345678999999987652211000 001
Q ss_pred CCccccEEEeCCCCCCCce-eecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 347 DPVLAPVVYRPDNIPGSRF-DLQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 347 ~~~~~~e~YDP~t~~g~~W-t~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
+....+.+||..+. +- ..+... ... -....+.|||+.+++|+..
T Consensus 292 ~~~~~i~~~d~~~~---~~~~~~~~~-~~~--v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 292 EGKFEARFYHKIFE---EEIGRVQGH-FGP--LNTVAISPQGTSYASGGED 336 (369)
T ss_dssp ---CEEEEEETTTC---CEEEEEECC-SSC--EEEEEECTTSSEEEEEETT
T ss_pred CCcceeEEEecCCC---cchhheecc-cCc--EEEEEECCCCCEEEEEcCC
Confidence 11235788998766 32 222111 111 1234567899999999864
No 34
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.63 E-value=0.013 Score=58.54 Aligned_cols=153 Identities=8% Similarity=-0.048 Sum_probs=88.1
Q ss_pred EEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCE-EECccccccccccceecCCCcEEEEcCCCC
Q 009420 42 HMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEF-RPLFVQSNVWCSSGAVRPDGVLIQTGGFND 120 (535)
Q Consensus 42 ~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w-~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~ 120 (535)
+...+.++++|+....+ ..+.++|++|.+. ..++.. ..+.+.++..||++|+....
T Consensus 47 ~~i~~~~~~lyv~~~~~-------------------~~v~viD~~t~~~~~~i~~~--~~p~~i~~~~~g~lyv~~~~-- 103 (328)
T 3dsm_A 47 QSMVIRDGIGWIVVNNS-------------------HVIFAIDINTFKEVGRITGF--TSPRYIHFLSDEKAYVTQIW-- 103 (328)
T ss_dssp EEEEEETTEEEEEEGGG-------------------TEEEEEETTTCCEEEEEECC--SSEEEEEEEETTEEEEEEBS--
T ss_pred eEEEEECCEEEEEEcCC-------------------CEEEEEECcccEEEEEcCCC--CCCcEEEEeCCCeEEEEECC--
Confidence 33445799999987521 2578999999886 334322 22223334378999998743
Q ss_pred CCCeEEEEcCCCCCCCCcee---cCCCCcc-cccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCee-eeccccccCC
Q 009420 121 GEKKIRSFVPCNDESCDWKE---IDGLGAR-RWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVY-SLPFLVQTND 194 (535)
Q Consensus 121 g~~~v~~ydp~~~~~~~W~~---~~~m~~~-R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~ 194 (535)
...+.++|+. +.+-.. +...... ..-..++. .++++||..-.....+.++ +.+. +.. ..+.
T Consensus 104 -~~~v~~iD~~---t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~--~~~~~i~~------ 170 (328)
T 3dsm_A 104 -DYRIFIINPK---TYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETD--KVVDELTI------ 170 (328)
T ss_dssp -CSEEEEEETT---TTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTT--EEEEEEEC------
T ss_pred -CCeEEEEECC---CCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCC--eEEEEEEc------
Confidence 2679999998 554321 1111000 02223344 6889999853112356666 4432 221 1111
Q ss_pred ccccCCCcce-EEEeeCCcEEEEec------------CeEEEEECCCCeEEEec
Q 009420 195 PRVENNLYPF-VFLNVDGFLFIFAN------------NRAILFDYVNNKVVKQY 235 (535)
Q Consensus 195 ~~~~~~~yp~-~~~~~dG~ifv~gg------------~~~~~yDp~t~~W~~~~ 235 (535)
...|. ..+.++|++|+... ..+.++|+++++..+.+
T Consensus 171 -----g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~ 219 (328)
T 3dsm_A 171 -----GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF 219 (328)
T ss_dssp -----SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE
T ss_pred -----CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE
Confidence 11232 34567899998864 35889999999876433
No 35
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.63 E-value=0.05 Score=52.05 Aligned_cols=257 Identities=12% Similarity=0.045 Sum_probs=130.3
Q ss_pred EEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc-cccccccceecCCCcEEEEcCCCCC
Q 009420 43 MQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ-SNVWCSSGAVRPDGVLIQTGGFNDG 121 (535)
Q Consensus 43 ~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~-~~~~c~~~~~l~dG~l~v~GG~~~g 121 (535)
.+.-++|++|+....+ ..+..||+. +++...... ......+.+...+|++|+....
T Consensus 20 i~~d~~g~l~v~~~~~-------------------~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--- 76 (299)
T 2z2n_A 20 ITVSDKGKVWITQHKA-------------------NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA--- 76 (299)
T ss_dssp EEECTTSCEEEEETTT-------------------TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT---
T ss_pred eEECCCCCEEEEecCC-------------------CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC---
Confidence 3334689999865321 147889998 777765422 1222233445578999998543
Q ss_pred CCeEEEEcCCCCCCCCceecCCCC-cccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccC
Q 009420 122 EKKIRSFVPCNDESCDWKEIDGLG-ARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVEN 199 (535)
Q Consensus 122 ~~~v~~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~ 199 (535)
...+.+||+. .++.... ++ ....-.+.+.-+||++|+..... ..+..| + .. ....... .. .
T Consensus 77 ~~~i~~~~~~----g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~d~-~g--~~~~~~~-~~-------~ 139 (299)
T 2z2n_A 77 ANKIGRITKK----GIIKEYT-LPNPDSAPYGITEGPNGDIWFTEMNG-NRIGRITD-DG--KIREYEL-PN-------K 139 (299)
T ss_dssp TTEEEEECTT----SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETTT-TEEEEECT-TC--CEEEEEC-SS-------T
T ss_pred CCeEEEECCC----CcEEEEe-CCCcCCCceeeEECCCCCEEEEecCC-ceEEEECC-CC--CEEEecC-CC-------C
Confidence 2468899985 2343332 11 11222345555689999975432 234445 4 21 2211111 00 0
Q ss_pred CCcceE-EEeeCCcEEEEe--cCeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCC
Q 009420 200 NLYPFV-FLNVDGFLFIFA--NNRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAP 276 (535)
Q Consensus 200 ~~yp~~-~~~~dG~ifv~g--g~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~ 276 (535)
...|.. ..-++|++|+.. +..+.+||+ +++... .+ ++.. -..+ ....+ . .+++||+.....
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~-~~~~--~~~~---~~i~~--~------~~g~l~v~~~~~ 203 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE-FK-IPTP--ASGP---VGITK--G------NDDALWFVEIIG 203 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EE-CSST--TCCE---EEEEE--C------TTSSEEEEETTT
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE-ee-CCCC--CCcc---eeEEE--C------CCCCEEEEccCC
Confidence 113433 345689999876 357889999 666553 21 1211 1111 11111 1 257888875322
Q ss_pred CCcccccccccccccCCceEEEEecCCCCCeeeecCC--CCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEE
Q 009420 277 KGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMP--QPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVV 354 (535)
Q Consensus 277 ~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~--~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~ 354 (535)
..+.+||+ + .++....++ ..+.. +.+.-++|+||+..... ..+.+
T Consensus 204 ----------------~~i~~~~~-~--g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~-------------~~i~~ 250 (299)
T 2z2n_A 204 ----------------NKIGRITT-S--GEITEFKIPTPNARPH-AITAGAGIDLWFTEWGA-------------NKIGR 250 (299)
T ss_dssp ----------------TEEEEECT-T--CCEEEEECSSTTCCEE-EEEECSTTCEEEEETTT-------------TEEEE
T ss_pred ----------------ceEEEECC-C--CcEEEEECCCCCCCce-eEEECCCCCEEEeccCC-------------ceEEE
Confidence 22445554 2 333332222 12222 33455789999875322 14678
Q ss_pred EeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecC
Q 009420 355 YRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGS 394 (535)
Q Consensus 355 YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG 394 (535)
||| +. +............-++.+ + +||++|++..
T Consensus 251 ~d~-~g---~~~~~~~~~~~~~~~~i~-~-~~g~l~v~~~ 284 (299)
T 2z2n_A 251 LTS-NN---IIEEYPIQIKSAEPHGIC-F-DGETIWFAME 284 (299)
T ss_dssp EET-TT---EEEEEECSSSSCCEEEEE-E-CSSCEEEEET
T ss_pred ECC-CC---ceEEEeCCCCCCccceEE-e-cCCCEEEEec
Confidence 998 44 554432111011112333 3 8999999865
No 36
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.63 E-value=0.0044 Score=60.62 Aligned_cols=220 Identities=11% Similarity=0.004 Sum_probs=120.1
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeec
Q 009420 109 DGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLP 187 (535)
Q Consensus 109 dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~ 187 (535)
.|+++++|..+ ..+.++|+++ ++-.|+.-..- ....+.+..++||++|+.+ ...+..| | +....|....
T Consensus 4 ~~~~lv~~~~~---~~v~~~d~~t-G~~~w~~~~~~--~~~~~~~~~~pdG~ilvs~---~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGW---NKIAIINKDT-KEIVWEYPLEK--GWECNSVAATKAGEILFSY---SKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CCEEEEECTTC---SEEEEEETTT-TEEEEEEECCT--TCCCCEEEECTTSCEEEEC---BSEEEEECT-TSCEEEEEEC
T ss_pred CCcEEEeeCCC---CEEEEEECCC-CeEEEEeCCCc--cCCCcCeEECCCCCEEEeC---CCCEEEECC-CCCEEEEEcC
Confidence 56888887653 6789999862 12347643311 1234677888999999943 2345556 5 3212343211
Q ss_pred cccccCCccccCCCcceEEEeeCCcEEEEec---CeEEEEECCCCe-EEEecCC-CCCCCCCCCCCCCceEeecccccCC
Q 009420 188 FLVQTNDPRVENNLYPFVFLNVDGFLFIFAN---NRAILFDYVNNK-VVKQYPA-IPGGDPRSYPSSGSAVLLPLKNLLA 262 (535)
Q Consensus 188 ~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg---~~~~~yDp~t~~-W~~~~p~-~p~~~~R~~~~~g~~v~lpl~~~~~ 262 (535)
. . . .. ...+..++||++++... ..+..+|+.... |...+.. ++. ....+ .+.+. +
T Consensus 74 -~-~--~----~~-~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~--~~~~~-~~v~~-~------- 133 (276)
T 3no2_A 74 -P-A--G----CE-MQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIER--PHAQF-RQINK-N------- 133 (276)
T ss_dssp -C-T--T----CE-EEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSS--GGGSC-SCCEE-C-------
T ss_pred -C-C--C----cc-ccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCc--ccccc-cCceE-C-------
Confidence 0 0 0 00 01245678999988753 356778885542 3322211 000 00111 12222 2
Q ss_pred CCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeecCCCCceeceeEEccCCeEEEEcCCCCCCCCc
Q 009420 263 PSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGW 342 (535)
Q Consensus 263 ~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~ 342 (535)
.+|.++++...+ ..+.+||+. .+-.|+......+ +++..+++|.++|++...
T Consensus 134 --~~G~~lv~~~~~----------------~~v~~~d~~-G~~~w~~~~~~~~---~~~~~~~~g~~~v~~~~~------ 185 (276)
T 3no2_A 134 --KKGNYLVPLFAT----------------SEVREIAPN-GQLLNSVKLSGTP---FSSAFLDNGDCLVACGDA------ 185 (276)
T ss_dssp --TTSCEEEEETTT----------------TEEEEECTT-SCEEEEEECSSCC---CEEEECTTSCEEEECBTT------
T ss_pred --CCCCEEEEecCC----------------CEEEEECCC-CCEEEEEECCCCc---cceeEcCCCCEEEEeCCC------
Confidence 267777765432 245677776 4556887621112 235678899999986533
Q ss_pred ccCCCCccccEEEeCCCCCCCceeecCC-CCCCc-ccccceeecCCCcEEEecC
Q 009420 343 ELGRDPVLAPVVYRPDNIPGSRFDLQNP-STIPR-MYHSTAVLLRDGRVLVGGS 394 (535)
Q Consensus 343 ~~~~~~~~~~e~YDP~t~~g~~Wt~~~~-~~~~R-~yhs~a~LlpDG~V~v~GG 394 (535)
..+..+||++.+ ..|+.-.. ..-.| .+.+.+.+++||.+||+..
T Consensus 186 -------~~v~~~d~~tG~-~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 186 -------HCFVQLNLESNR-IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp -------SEEEEECTTTCC-EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred -------CeEEEEeCcCCc-EEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 147899998651 14764321 11113 2334566789999999983
No 37
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.62 E-value=0.0078 Score=60.27 Aligned_cols=155 Identities=10% Similarity=0.047 Sum_probs=92.3
Q ss_pred EeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECc---cccccccccceecCCCcEEEEcCCCCC
Q 009420 45 LLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLF---VQSNVWCSSGAVRPDGVLIQTGGFNDG 121 (535)
Q Consensus 45 ~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~---~~~~~~c~~~~~l~dG~l~v~GG~~~g 121 (535)
.-++|++++.|+.+ | .+.+||..+++|.... ..+.....+.++-+||+.++.|+.+
T Consensus 24 ~sp~g~~las~~~D----------~---------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-- 82 (345)
T 3fm0_A 24 WNPAGTLLASCGGD----------R---------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-- 82 (345)
T ss_dssp ECTTSSCEEEEETT----------S---------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT--
T ss_pred ECCCCCEEEEEcCC----------C---------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC--
Confidence 34689988888754 2 4789999988875432 1233333344566899999999874
Q ss_pred CCeEEEEcCCCCCCCCceecCCCCcc-cccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccC
Q 009420 122 EKKIRSFVPCNDESCDWKEIDGLGAR-RWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVEN 199 (535)
Q Consensus 122 ~~~v~~ydp~~~~~~~W~~~~~m~~~-R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~ 199 (535)
..+.+||.. ..++..+..+... ..-.+++.-+||+.++.|+.++ .+.+| .... ........+.....
T Consensus 83 -~~v~iw~~~---~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-~v~iwd~~~~-~~~~~~~~~~~h~~----- 151 (345)
T 3fm0_A 83 -ATTCIWKKN---QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK-SVWVWEVDEE-DEYECVSVLNSHTQ----- 151 (345)
T ss_dssp -SCEEEEEEC---CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-CEEEEEECTT-SCEEEEEEECCCCS-----
T ss_pred -CcEEEEEcc---CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC-eEEEEECCCC-CCeEEEEEecCcCC-----
Confidence 568888876 5555443333211 1223455667899999998765 45666 3321 12221111111100
Q ss_pred CCcceEEEeeCCcEEEEec--CeEEEEECCCCeEE
Q 009420 200 NLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVV 232 (535)
Q Consensus 200 ~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~ 232 (535)
.--.+...|+|++++.|+ ..+.+||..+++|.
T Consensus 152 -~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 152 -DVKHVVWHPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp -CEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred -CeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 011234457888888875 45889999988876
No 38
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.62 E-value=0.033 Score=52.78 Aligned_cols=69 Identities=10% Similarity=-0.011 Sum_probs=38.4
Q ss_pred eeEEEEeeCCeEEE-EecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCC
Q 009420 40 SMHMQLLNNDRVVM-FDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGF 118 (535)
Q Consensus 40 ~~~~~~~~~gkv~v-~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~ 118 (535)
+...+.-++|++|+ .+..+ ..+.+||+.+.+.............+.++..+|+||+...
T Consensus 26 p~~i~~~~~g~l~v~~~~~~-------------------~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~- 85 (270)
T 1rwi_B 26 PSGVAVDSAGNVYVTSEGMY-------------------GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF- 85 (270)
T ss_dssp EEEEEECTTCCEEEEECSSS-------------------CEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-
T ss_pred ccceEECCCCCEEEEccCCC-------------------CcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-
Confidence 33344447899998 43321 1467888887766554322212223444567899998865
Q ss_pred CCCCCeEEEEcCC
Q 009420 119 NDGEKKIRSFVPC 131 (535)
Q Consensus 119 ~~g~~~v~~ydp~ 131 (535)
...+.+||+.
T Consensus 86 ---~~~i~~~d~~ 95 (270)
T 1rwi_B 86 ---NNRVVTLAAG 95 (270)
T ss_dssp ---TTEEEEECTT
T ss_pred ---CCEEEEEeCC
Confidence 2578999987
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.60 E-value=0.038 Score=56.01 Aligned_cols=88 Identities=10% Similarity=-0.008 Sum_probs=53.8
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCC-cccccceEEEec
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLG-ARRWYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L~ 157 (535)
.+.+||..+++-...-..+.....+.++.++|+++++|+.+ ..+.+||.. +.+- +..+. ....-.+++..+
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~---~~~~--~~~~~~h~~~v~~~~~~~ 191 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQD---MQLKIWSVK---DGSN--PRTLIGHRATVTDIAIID 191 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TCCC--CEEEECCSSCEEEEEEET
T ss_pred CEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCC---CeEEEEeCC---CCcC--ceEEcCCCCcEEEEEEcC
Confidence 47889988776554432333333445567899999998864 579999987 3321 11121 111223455667
Q ss_pred CCcEEEEcCccCCeeEEE
Q 009420 158 DGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 158 dG~vyvvGG~~~~~~E~y 175 (535)
||+.++.|+.++ .+.+|
T Consensus 192 ~~~~l~s~~~d~-~v~iw 208 (420)
T 3vl1_A 192 RGRNVLSASLDG-TIRLW 208 (420)
T ss_dssp TTTEEEEEETTS-CEEEE
T ss_pred CCCEEEEEcCCC-cEEEe
Confidence 899999888764 35555
No 40
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.58 E-value=0.014 Score=60.06 Aligned_cols=149 Identities=13% Similarity=0.135 Sum_probs=85.3
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEE
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIR 126 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~ 126 (535)
+++++++.|+.+ | .+.+||..+++....-..+.....+.++.++|++++.|+.+ ..++
T Consensus 118 p~~~~l~s~s~D----------g---------~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D---~~i~ 175 (410)
T 1vyh_C 118 PVFSVMVSASED----------A---------TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD---MTIK 175 (410)
T ss_dssp SSSSEEEEEESS----------S---------CEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT---SCCC
T ss_pred CCCCEEEEEeCC----------C---------eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC---CeEE
Confidence 577888777753 2 47899998876543222222222334456799999999874 5688
Q ss_pred EEcCCCCCCCCceecCCCCcc-cccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcce
Q 009420 127 SFVPCNDESCDWKEIDGLGAR-RWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPF 204 (535)
Q Consensus 127 ~ydp~~~~~~~W~~~~~m~~~-R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~ 204 (535)
+||.. +.+ .+..+... ..-.+++..++|+.++.|+.++ .+.+| ..+. ... ..+.... ...-.
T Consensus 176 iwd~~---~~~--~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~-~i~~wd~~~~--~~~--~~~~~h~------~~v~~ 239 (410)
T 1vyh_C 176 LWDFQ---GFE--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDK-TIKMWEVQTG--YCV--KTFTGHR------EWVRM 239 (410)
T ss_dssp EEETT---SSC--EEECCCCCSSCEEEEEECSSSSEEEEEETTS-EEEEEETTTC--CEE--EEEECCS------SCEEE
T ss_pred EEeCC---CCc--eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCC-eEEEEECCCC--cEE--EEEeCCC------ccEEE
Confidence 89876 332 22222211 1123455666889888888764 56666 3321 111 0011110 01112
Q ss_pred EEEeeCCcEEEEec--CeEEEEECCCCeEEE
Q 009420 205 VFLNVDGFLFIFAN--NRAILFDYVNNKVVK 233 (535)
Q Consensus 205 ~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~ 233 (535)
....++|++++.|+ ..+.+||..+.+...
T Consensus 240 ~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~ 270 (410)
T 1vyh_C 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKA 270 (410)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCceee
Confidence 33456899888876 467899998876543
No 41
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.57 E-value=0.013 Score=57.16 Aligned_cols=222 Identities=13% Similarity=0.139 Sum_probs=117.1
Q ss_pred ceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCc-eecCC---CCcccccceEEEecCCcEEEEcCccCCeeEEE-eCC
Q 009420 104 GAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDW-KEIDG---LGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKN 178 (535)
Q Consensus 104 ~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W-~~~~~---m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~ 178 (535)
.++.++|+++++|+ + ..+.+||.. +.+. ..... ......-.+++..+||+.+++|+.++ .+.+| ...
T Consensus 57 ~~~~~~~~~l~~~~--d--g~i~iw~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~~ 128 (337)
T 1gxr_A 57 VTISNPTRHVYTGG--K--GCVKVWDIS---HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS-TLSIWDLAA 128 (337)
T ss_dssp EEECSSSSEEEEEC--B--SEEEEEETT---STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSS-EEEEEECCC
T ss_pred EEEecCCcEEEEcC--C--CeEEEEECC---CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCC-cEEEEECCC
Confidence 34567999999988 2 579999987 3321 11111 11222233556667899888887654 56667 332
Q ss_pred CCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeec
Q 009420 179 GAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLP 256 (535)
Q Consensus 179 ~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lp 256 (535)
. +......+..... ..-.....++|+.++.++ ..+.+||..+.+....+. .. .... ......
T Consensus 129 ~--~~~~~~~~~~~~~------~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~---~~--~~~i--~~~~~~- 192 (337)
T 1gxr_A 129 P--TPRIKAELTSSAP------ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ---GH--TDGA--SCIDIS- 192 (337)
T ss_dssp C----EEEEEEECSSS------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---CC--SSCE--EEEEEC-
T ss_pred C--CcceeeecccCCC------ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee---cc--cCce--EEEEEC-
Confidence 1 2111111111100 011234456888888775 468899999887654332 11 1100 011121
Q ss_pred ccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCC
Q 009420 257 LKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGA 335 (535)
Q Consensus 257 l~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~ 335 (535)
.+++.+++|+.+ ..+..+|+.. .+-... .... .-......|+|+.+++|+.
T Consensus 193 --------~~~~~l~~~~~d----------------g~i~~~d~~~--~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 193 --------NDGTKLWTGGLD----------------NTVRSWDLRE--GRQLQQHDFTS--QIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp --------TTSSEEEEEETT----------------SEEEEEETTT--TEEEEEEECSS--CEEEEEECTTSSEEEEEET
T ss_pred --------CCCCEEEEEecC----------------CcEEEEECCC--CceEeeecCCC--ceEEEEECCCCCEEEEEcC
Confidence 266777777754 1234555542 111111 2111 1223345689999998875
Q ss_pred CCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 336 GKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 336 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
+ + .+.+||..+. +-..+.... .. -......|||+.+++|+..
T Consensus 245 ~-~------------~i~~~~~~~~---~~~~~~~~~-~~--v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 245 S-S------------NVEVLHVNKP---DKYQLHLHE-SC--VLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp T-S------------CEEEEETTSS---CEEEECCCS-SC--EEEEEECTTSSEEEEEETT
T ss_pred C-C------------cEEEEECCCC---CeEEEcCCc-cc--eeEEEECCCCCEEEEecCC
Confidence 4 2 4789998876 433222111 11 1234457899999998853
No 42
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.56 E-value=0.062 Score=51.40 Aligned_cols=261 Identities=14% Similarity=0.077 Sum_probs=132.7
Q ss_pred eeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcccc-ccccccceecCCCcEEEEcCC
Q 009420 40 SMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQS-NVWCSSGAVRPDGVLIQTGGF 118 (535)
Q Consensus 40 ~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~-~~~c~~~~~l~dG~l~v~GG~ 118 (535)
....+.-.+|+||+....+ ..+..||+. +++....... .....+.++..+|++|+....
T Consensus 22 p~~i~~d~~g~l~v~~~~~-------------------~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 81 (300)
T 2qc5_A 22 PYGITSSEDGKVWFTQHKA-------------------NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG 81 (300)
T ss_dssp EEEEEECTTSCEEEEETTT-------------------TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT
T ss_pred cceeeECCCCCEEEEcCCC-------------------CeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC
Confidence 3344444689999876421 146789988 7777644221 122333445578999997543
Q ss_pred CCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccc
Q 009420 119 NDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRV 197 (535)
Q Consensus 119 ~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~ 197 (535)
...+.+||+. .++.....-.....-.+.+.-.+|++|+....+ ..+..| +. . +...... ..
T Consensus 82 ---~~~v~~~d~~----g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~~~~-g--~~~~~~~-~~------ 143 (300)
T 2qc5_A 82 ---ANKIGKLSKK----GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNG-DRIGKLTAD-G--TIYEYDL-PN------ 143 (300)
T ss_dssp ---TTEEEEECTT----SCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-TEEEEECTT-S--CEEEEEC-SS------
T ss_pred ---CCeEEEECCC----CCeEEecCCCCCCCCccceECCCCCEEEEccCC-CeEEEECCC-C--CEEEccC-CC------
Confidence 2568899986 334332211011222345555689999875432 234444 33 1 2221111 00
Q ss_pred cCCCcceEE-EeeCCcEEEEe--cCeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcC
Q 009420 198 ENNLYPFVF-LNVDGFLFIFA--NNRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGG 274 (535)
Q Consensus 198 ~~~~yp~~~-~~~dG~ifv~g--g~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG 274 (535)
....|... .-++|+||+.. +..+.+||+ +++... .. ++.. -..+ ..+.+ . .+++||++..
T Consensus 144 -~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~-~~~~--~~~~---~~i~~--d------~~g~l~v~~~ 206 (300)
T 2qc5_A 144 -KGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YP-LPTN--AAAP---VGITS--G------NDGALWFVEI 206 (300)
T ss_dssp -TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EE-CSST--TCCE---EEEEE--C------TTSSEEEEET
T ss_pred -CCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-ee-CCCC--CCCc---ceEEE--C------CCCCEEEEcc
Confidence 11234444 34689999876 457889999 555542 31 2221 1111 12211 1 2678888643
Q ss_pred CCCCcccccccccccccCCceEEEEecCCCCCeeeecCC--CCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCcccc
Q 009420 275 APKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMP--QPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAP 352 (535)
Q Consensus 275 ~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~--~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~ 352 (535)
.. ..+.+||+. .++....++ ..+. .+.+.-++|+||+..-.. ..+
T Consensus 207 ~~----------------~~i~~~~~~---g~~~~~~~~~~~~~~-~~i~~d~~g~l~v~~~~~-------------~~i 253 (300)
T 2qc5_A 207 MG----------------NKIGRITTT---GEISEYDIPTPNARP-HAITAGKNSEIWFTEWGA-------------NQI 253 (300)
T ss_dssp TT----------------TEEEEECTT---CCEEEEECSSTTCCE-EEEEECSTTCEEEEETTT-------------TEE
T ss_pred CC----------------CEEEEEcCC---CcEEEEECCCCCCCc-eEEEECCCCCEEEeccCC-------------CeE
Confidence 21 234455542 333332222 1111 233455789999875322 146
Q ss_pred EEEeCCCCCCCceeecC-CCCCCcccccceeecCCCcEEEecC
Q 009420 353 VVYRPDNIPGSRFDLQN-PSTIPRMYHSTAVLLRDGRVLVGGS 394 (535)
Q Consensus 353 e~YDP~t~~g~~Wt~~~-~~~~~R~yhs~a~LlpDG~V~v~GG 394 (535)
.+||+ +. +++... +....+ -++ ..+.+||++|++..
T Consensus 254 ~~~~~-~g---~~~~~~~~~~~~~-~~~-i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 254 GRITN-DN---TIQEYQLQTENAE-PHG-ITFGKDGSVWFALK 290 (300)
T ss_dssp EEECT-TS---CEEEEECCSTTCC-CCC-EEECTTSCEEEECS
T ss_pred EEECC-CC---cEEEEECCccCCc-cce-eEeCCCCCEEEEcc
Confidence 78998 44 544331 111111 123 34568999999875
No 43
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.56 E-value=0.021 Score=55.91 Aligned_cols=129 Identities=14% Similarity=0.103 Sum_probs=69.6
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCCc-e-ecCCCCcccccceEEE
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGV-LIQTGGFNDGEKKIRSFVPCNDESCDW-K-EIDGLGARRWYATDHI 155 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~~~~~~~W-~-~~~~m~~~R~y~s~~~ 155 (535)
.+.+||+.+++....-....... +.++-+||+ +|+.+.. ...+.+||+. +.+. . .+..-..++ .+.+.
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~---~~~i~~~d~~---~~~~~~~~~~~~~~~~--~~~~~ 91 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF---CQTLVQIETQ---LEPPKVVAIQEGQSSM--ADVDI 91 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST---TCEEEEEECS---SSSCEEEEEEECSSCC--CCEEE
T ss_pred eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC---CCeEEEEECC---CCceeEEecccCCCCc--cceEE
Confidence 57899999998865432222222 445667887 6666543 2589999998 5543 1 111111122 22566
Q ss_pred ecCCcEEEEcCccCC--eeEEEeCCCCCCee-eeccccccCCccccCCCcce-EEEeeCCc-EEEEec--Ce-EEEEECC
Q 009420 156 LPDGRIIIIGGRRQF--NYEFYPKNGAPNVY-SLPFLVQTNDPRVENNLYPF-VFLNVDGF-LFIFAN--NR-AILFDYV 227 (535)
Q Consensus 156 L~dG~vyvvGG~~~~--~~E~yP~~~~~~w~-~~~~l~~~~~~~~~~~~yp~-~~~~~dG~-ifv~gg--~~-~~~yDp~ 227 (535)
-+||+.++++...+. .+.+|..... +.. .++. ...|+ ....|||+ ||+... .. +.+||..
T Consensus 92 s~dg~~l~~~~~~~~~~~i~v~d~~~~-~~~~~~~~-----------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 92 TPDDQFAVTVTGLNHPFNMQSYSFLKN-KFISTIPI-----------PYDAVGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp CTTSSEEEECCCSSSSCEEEEEETTTT-EEEEEEEC-----------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEecCCCCcccEEEEECCCC-CeEEEEEC-----------CCCccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 678886555544433 6777733211 211 1111 11223 45567886 777643 45 7788765
Q ss_pred C
Q 009420 228 N 228 (535)
Q Consensus 228 t 228 (535)
.
T Consensus 160 ~ 160 (331)
T 3u4y_A 160 A 160 (331)
T ss_dssp T
T ss_pred C
Confidence 4
No 44
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.51 E-value=0.013 Score=59.69 Aligned_cols=250 Identities=12% Similarity=0.060 Sum_probs=130.4
Q ss_pred eeEEEECCCCCEEECccc-cccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEec
Q 009420 79 HSVEYSVLTNEFRPLFVQ-SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~ 157 (535)
.+.+||..+++....... +.....+.+..+||+++++|+.+ ..+.+||.. +.+.. ..+............
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d---g~i~iwd~~---~~~~~--~~~~~~~~~v~~~~~- 184 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN---GLVDIYDVE---SQTKL--RTMAGHQARVGCLSW- 184 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT---TCCEE--EEECCCSSCEEEEEE-
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC---CeEEEEECc---CCeEE--EEecCCCCceEEEEE-
Confidence 578999999887665432 33333344566799999998763 478999987 44322 122211212223333
Q ss_pred CCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEEe
Q 009420 158 DGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVKQ 234 (535)
Q Consensus 158 dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~ 234 (535)
++++++.|+.++ .+.+| ..... ... .. +..... .--.+...++|++++.|+ ..+.+||..+.+-...
T Consensus 185 ~~~~l~~~~~dg-~i~i~d~~~~~-~~~-~~-~~~~~~------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 254 (401)
T 4aez_A 185 NRHVLSSGSRSG-AIHHHDVRIAN-HQI-GT-LQGHSS------EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT 254 (401)
T ss_dssp ETTEEEEEETTS-EEEEEETTSSS-CEE-EE-EECCSS------CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEE
T ss_pred CCCEEEEEcCCC-CEEEEecccCc-cee-eE-EcCCCC------CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE
Confidence 788888888764 45566 32111 111 11 111100 011234456898888876 4688999988654432
Q ss_pred cCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeecCCC
Q 009420 235 YPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQ 314 (535)
Q Consensus 235 ~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~~ 314 (535)
+. .. .... .+....| .+..++++||... ...+..+|+.. .+-.. .+..
T Consensus 255 ~~---~~--~~~v--~~~~~~p--------~~~~ll~~~~gs~--------------d~~i~i~d~~~--~~~~~-~~~~ 302 (401)
T 4aez_A 255 KT---NH--NAAV--KAVAWCP--------WQSNLLATGGGTM--------------DKQIHFWNAAT--GARVN-TVDA 302 (401)
T ss_dssp EC---CC--SSCC--CEEEECT--------TSTTEEEEECCTT--------------TCEEEEEETTT--CCEEE-EEEC
T ss_pred ec---CC--cceE--EEEEECC--------CCCCEEEEecCCC--------------CCEEEEEECCC--CCEEE-EEeC
Confidence 32 11 1100 1122222 2456777775211 12344556543 11111 1111
Q ss_pred CceeceeEEccCCeEEEEc-CCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCC--CCCcccccceeecCCCcEEE
Q 009420 315 PRVMGDMTLLPNGNVLLIN-GAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPS--TIPRMYHSTAVLLRDGRVLV 391 (535)
Q Consensus 315 ~R~~~~~v~lpdG~I~vvG-G~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~--~~~R~yhs~a~LlpDG~V~v 391 (535)
...-.+....++|+.+++. |...+ .+.+||..+. +......+ ...+. ....+.|||+.++
T Consensus 303 ~~~v~~~~~s~~~~~l~~~~g~~dg------------~i~v~~~~~~---~~~~~~~~~~h~~~v--~~~~~s~dg~~l~ 365 (401)
T 4aez_A 303 GSQVTSLIWSPHSKEIMSTHGFPDN------------NLSIWSYSSS---GLTKQVDIPAHDTRV--LYSALSPDGRILS 365 (401)
T ss_dssp SSCEEEEEECSSSSEEEEEECTTTC------------EEEEEEEETT---EEEEEEEEECCSSCC--CEEEECTTSSEEE
T ss_pred CCcEEEEEECCCCCeEEEEeecCCC------------cEEEEecCCc---cceeEEEecCCCCCE--EEEEECCCCCEEE
Confidence 1112234556889888773 32212 5789998876 55543221 11122 2345678999999
Q ss_pred ecCCC
Q 009420 392 GGSNP 396 (535)
Q Consensus 392 ~GG~~ 396 (535)
+|+..
T Consensus 366 s~~~d 370 (401)
T 4aez_A 366 TAASD 370 (401)
T ss_dssp EECTT
T ss_pred EEeCC
Confidence 99864
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.49 E-value=0.011 Score=59.97 Aligned_cols=261 Identities=9% Similarity=0.058 Sum_probs=126.6
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPD 158 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~d 158 (535)
.+.+||..+.+....-... ......+.-++|+++++|+.+ ..+.+||.. +.+-...-. .....-.+++..+|
T Consensus 79 ~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~---~~~~~~~~~-~h~~~v~~~~~~~~ 150 (420)
T 3vl1_A 79 HDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTE---GDIKVLDSN---FNLQREIDQ-AHVSEITKLKFFPS 150 (420)
T ss_dssp EEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETT---SCEEEECTT---SCEEEEETT-SSSSCEEEEEECTT
T ss_pred cEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECC---CCEEEEeCC---Ccceeeecc-cccCccEEEEECCC
Confidence 4678887664432211111 222222345699999999764 578999987 433222111 11122234556678
Q ss_pred CcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEEecC
Q 009420 159 GRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVKQYP 236 (535)
Q Consensus 159 G~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~p 236 (535)
|+.++.|+.++ .+.+|..........+. .... .--.+...++|+.++.|+ ..+.+||..+++-...+.
T Consensus 151 ~~~l~s~s~d~-~i~iwd~~~~~~~~~~~---~h~~------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 220 (420)
T 3vl1_A 151 GEALISSSQDM-QLKIWSVKDGSNPRTLI---GHRA------TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFN 220 (420)
T ss_dssp SSEEEEEETTS-EEEEEETTTCCCCEEEE---CCSS------CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCEEEEEeCCC-eEEEEeCCCCcCceEEc---CCCC------cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEee
Confidence 99888888764 56667222111111111 1100 011234467898888775 458899999887554332
Q ss_pred CCCCCCCCCCCCCCceEeeccc----------ccC--CCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCC
Q 009420 237 AIPGGDPRSYPSSGSAVLLPLK----------NLL--APSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPT 304 (535)
Q Consensus 237 ~~p~~~~R~~~~~g~~v~lpl~----------~~~--~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~ 304 (535)
.... ... . .....+.+-. +.. .-..+++.+++|+.+. .+..+|+..
T Consensus 221 ~~~~--~~~-~-v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----------------~i~i~d~~~-- 278 (420)
T 3vl1_A 221 RKEN--PHD-G-VNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG----------------VITVHNVFS-- 278 (420)
T ss_dssp BTTB--TTC-C-EEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS----------------CEEEEETTT--
T ss_pred cCCC--CCC-C-ccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC----------------eEEEEECCC--
Confidence 1100 000 0 0000000000 000 0012677888877541 244566543
Q ss_pred CCeeee-cCCCCceeceeEEccCCe-EEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCccccccee
Q 009420 305 PTWVLE-TMPQPRVMGDMTLLPNGN-VLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAV 382 (535)
Q Consensus 305 ~~W~~~-~m~~~R~~~~~v~lpdG~-I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~ 382 (535)
.+-... .......-.+....|+|+ ++++|+.+ | .+.+||..+..-. ...+.... ...-.++
T Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d-g------------~i~vwd~~~~~~~-~~~~~~~~---~~~v~~~ 341 (420)
T 3vl1_A 279 KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN-G------------MLAQWDLRSPECP-VGEFLINE---GTPINNV 341 (420)
T ss_dssp CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT-S------------EEEEEETTCTTSC-SEEEEEST---TSCEEEE
T ss_pred CceeEEcccccCCCceeEEEeCCCCCEEEEEeCC-C------------eEEEEEcCCCcCc-hhhhhccC---CCCceEE
Confidence 111111 111222222345668888 88888755 2 5789998876110 11111100 0011234
Q ss_pred ecCCCcEEEecCCC
Q 009420 383 LLRDGRVLVGGSNP 396 (535)
Q Consensus 383 LlpDG~V~v~GG~~ 396 (535)
..+|++.+++|+..
T Consensus 342 ~~~~~~~l~s~~~d 355 (420)
T 3vl1_A 342 YFAAGALFVSSGFD 355 (420)
T ss_dssp EEETTEEEEEETTT
T ss_pred EeCCCCEEEEecCC
Confidence 55799999998853
No 46
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.46 E-value=0.11 Score=52.05 Aligned_cols=261 Identities=11% Similarity=0.112 Sum_probs=125.4
Q ss_pred EEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCC--EEECccccccccccceecCCCcEEEEcCCCC
Q 009420 43 MQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNE--FRPLFVQSNVWCSSGAVRPDGVLIQTGGFND 120 (535)
Q Consensus 43 ~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~--w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~ 120 (535)
..++.+++||+... + | .+.++|++|++ |+.-. ..... +..++.+|+||+....
T Consensus 98 ~~~~~~~~v~v~~~-~----------g---------~l~a~d~~tG~~~W~~~~--~~~~~-~~p~~~~~~v~v~~~~-- 152 (376)
T 3q7m_A 98 GVTVSGGHVYIGSE-K----------A---------QVYALNTSDGTVAWQTKV--AGEAL-SRPVVSDGLVLIHTSN-- 152 (376)
T ss_dssp EEEEETTEEEEEET-T----------S---------EEEEEETTTCCEEEEEEC--SSCCC-SCCEEETTEEEEECTT--
T ss_pred CceEeCCEEEEEcC-C----------C---------EEEEEECCCCCEEEEEeC--CCceE-cCCEEECCEEEEEcCC--
Confidence 34456888887542 1 1 47889999887 54321 11111 2223447777775432
Q ss_pred CCCeEEEEcCCCCCCCCceecCCCC--cccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeee-ccccccCCcc
Q 009420 121 GEKKIRSFVPCNDESCDWKEIDGLG--ARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSL-PFLVQTNDPR 196 (535)
Q Consensus 121 g~~~v~~ydp~~~~~~~W~~~~~m~--~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~-~~l~~~~~~~ 196 (535)
..+..||+.+ ++..|+.-..-+ ..+...+.+.. +|.||+ |..+ ..+-.+ +++....|... .......+.
T Consensus 153 --g~l~~~d~~t-G~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~-g~~~-g~l~~~d~~tG~~~w~~~~~~~~~~~~~- 225 (376)
T 3q7m_A 153 --GQLQALNEAD-GAVKWTVNLDMPSLSLRGESAPTTA-FGAAVV-GGDN-GRVSAVLMEQGQMIWQQRISQATGSTEI- 225 (376)
T ss_dssp --SEEEEEETTT-CCEEEEEECCC-----CCCCCCEEE-TTEEEE-CCTT-TEEEEEETTTCCEEEEEECCC--------
T ss_pred --CeEEEEECCC-CcEEEEEeCCCCceeecCCCCcEEE-CCEEEE-EcCC-CEEEEEECCCCcEEEEEecccCCCCccc-
Confidence 4688999872 123487543211 11222233333 677766 4332 233344 43322234321 100000000
Q ss_pred ccCCCcceEEEeeCCcEEEEe-cCeEEEEECCCCe--EEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEc
Q 009420 197 VENNLYPFVFLNVDGFLFIFA-NNRAILFDYVNNK--VVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCG 273 (535)
Q Consensus 197 ~~~~~yp~~~~~~dG~ifv~g-g~~~~~yDp~t~~--W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~G 273 (535)
..........++.+|.||+.+ +..+.++|+++++ |.. + .+ . . ..... .+++||+..
T Consensus 226 ~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~--~-~~----~-~----~~~~~---------~~~~l~~~~ 284 (376)
T 3q7m_A 226 DRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKR--E-LG----S-V----NDFIV---------DGNRIYLVD 284 (376)
T ss_dssp ----CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEE--C-CC----C-E----EEEEE---------ETTEEEEEE
T ss_pred ccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeec--c-CC----C-C----CCceE---------ECCEEEEEc
Confidence 000000011234578888876 3568899998764 542 1 11 1 0 11111 267888764
Q ss_pred CCCCCcccccccccccccCCceEEEEecCCCCCeeeecCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccE
Q 009420 274 GAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPV 353 (535)
Q Consensus 274 G~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e 353 (535)
.. ..+.+||+.+....|+...+.... ....+ +.+++||+... . | .+.
T Consensus 285 ~~-----------------g~l~~~d~~tG~~~w~~~~~~~~~-~~~~~-~~~~~l~v~~~-~-g------------~l~ 331 (376)
T 3q7m_A 285 QN-----------------DRVMALTIDGGVTLWTQSDLLHRL-LTSPV-LYNGNLVVGDS-E-G------------YLH 331 (376)
T ss_dssp TT-----------------CCEEEEETTTCCEEEEECTTTTSC-CCCCE-EETTEEEEECT-T-S------------EEE
T ss_pred CC-----------------CeEEEEECCCCcEEEeecccCCCc-ccCCE-EECCEEEEEeC-C-C------------eEE
Confidence 32 134567776545568765333322 22223 34888887432 1 1 468
Q ss_pred EEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecC
Q 009420 354 VYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGS 394 (535)
Q Consensus 354 ~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG 394 (535)
+||+++.+ ..|+.-.. ..... ...+..||+||+...
T Consensus 332 ~~d~~tG~-~~~~~~~~--~~~~~--~~~~~~~~~l~v~~~ 367 (376)
T 3q7m_A 332 WINVEDGR-FVAQQKVD--SSGFQ--TEPVAADGKLLIQAK 367 (376)
T ss_dssp EEETTTCC-EEEEEECC--TTCBC--SCCEEETTEEEEEBT
T ss_pred EEECCCCc-EEEEEecC--CCcce--eCCEEECCEEEEEeC
Confidence 99998861 13654221 11111 222335889888764
No 47
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.44 E-value=0.063 Score=52.41 Aligned_cols=177 Identities=11% Similarity=0.019 Sum_probs=90.8
Q ss_pred ccCCCceEEcccCCCcceeEEEEeeCCe-EEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCE-EECccccccc
Q 009420 23 DAAGGGWQLLQKSIGISSMHMQLLNNDR-VVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEF-RPLFVQSNVW 100 (535)
Q Consensus 23 ~~~~g~W~~l~~~~~~~~~~~~~~~~gk-v~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w-~~~~~~~~~~ 100 (535)
+...++........ ......+.-++|+ +|+.+..+ ..+.+||+.+++. .........-
T Consensus 26 d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~-------------------~~i~~~d~~~~~~~~~~~~~~~~~ 85 (331)
T 3u4y_A 26 STDTLEILNQITLG-YDFVDTAITSDCSNVVVTSDFC-------------------QTLVQIETQLEPPKVVAIQEGQSS 85 (331)
T ss_dssp ETTTCCEEEEEECC-CCEEEEEECSSSCEEEEEESTT-------------------CEEEEEECSSSSCEEEEEEECSSC
T ss_pred eCcccceeeeEEcc-CCcceEEEcCCCCEEEEEeCCC-------------------CeEEEEECCCCceeEEecccCCCC
Confidence 44456654433322 2222444447887 55554321 2578999999885 2222222222
Q ss_pred cccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCc-EEEEcCccCCeeEEE-eCC
Q 009420 101 CSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGR-IIIIGGRRQFNYEFY-PKN 178 (535)
Q Consensus 101 c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~-vyvvGG~~~~~~E~y-P~~ 178 (535)
+.+.++.+||+.++++....+...+.+||.. +.+.... +.........+.-+||+ +|+.+..+...+.+| -..
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~---~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 86 MADVDITPDDQFAVTVTGLNHPFNMQSYSFL---KNKFIST--IPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp CCCEEECTTSSEEEECCCSSSSCEEEEEETT---TTEEEEE--EECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred ccceEECCCCCEEEEecCCCCcccEEEEECC---CCCeEEE--EECCCCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 3324566889866654432222389999987 5543322 22222224566777886 666654433325666 222
Q ss_pred CCCCeeeeccccccCCccccCCCcce-EEEeeCCc-EEEEe--cCeEEEEECCCCeE
Q 009420 179 GAPNVYSLPFLVQTNDPRVENNLYPF-VFLNVDGF-LFIFA--NNRAILFDYVNNKV 231 (535)
Q Consensus 179 ~~~~w~~~~~l~~~~~~~~~~~~yp~-~~~~~dG~-ifv~g--g~~~~~yDp~t~~W 231 (535)
+ ....... .... .....|. ....+||+ +|+.+ ++.+.+||.++.+.
T Consensus 161 ~-g~~~~~~-~~~~-----~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 161 D-GVLFDTG-QEFI-----SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp T-CCEEEEE-EEEE-----CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred C-CcEeecC-Cccc-----cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 1 1111110 0000 0112233 34567997 77765 35688999988765
No 48
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.44 E-value=0.037 Score=55.05 Aligned_cols=225 Identities=15% Similarity=0.190 Sum_probs=116.2
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCee
Q 009420 106 VRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVY 184 (535)
Q Consensus 106 ~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~ 184 (535)
+-+||++++.|+.+ ..+++||.. +.+-...-+. ...+-.+++.-++|+.++.||.++ .+.+| .........
T Consensus 63 ~s~d~~~l~s~s~D---g~v~iWd~~---~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~-~v~iw~~~~~~~~~~ 134 (340)
T 1got_B 63 WGTDSRLLLSASQD---GKLIIWDSY---TTNKVHAIPL-RSSWVMTCAYAPSGNYVACGGLDN-ICSIYNLKTREGNVR 134 (340)
T ss_dssp ECTTSSEEEEEETT---TEEEEEETT---TCCEEEEEEC-SSSCEEEEEECTTSSEEEEEETTC-EEEEEETTTCSBSCE
T ss_pred ECCCCCEEEEEeCC---CcEEEEECC---CCCcceEeec-CCccEEEEEECCCCCEEEEEeCCC-eEEEEECccCCCcce
Confidence 45689999998874 579999987 4332111111 112233555667899999998764 45666 322111111
Q ss_pred eeccccccCCccccCCCcceEEEeeCCcEEEEec-CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCC
Q 009420 185 SLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN-NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAP 263 (535)
Q Consensus 185 ~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~ 263 (535)
....+..... .--.....++++++..+. ..+.+||..+++....+ ... . +...-+...
T Consensus 135 ~~~~~~~h~~------~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~---~~h--~-----~~v~~~~~~----- 193 (340)
T 1got_B 135 VSRELAGHTG------YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF---TGH--T-----GDVMSLSLA----- 193 (340)
T ss_dssp EEEEEECCSS------CEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEE---CCC--S-----SCEEEEEEC-----
T ss_pred eEEEecCCCc------cEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEE---cCC--C-----CceEEEEEC-----
Confidence 1111111100 001122346777655543 46889999988755333 221 1 111111111
Q ss_pred CCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCCCCCCCCc
Q 009420 264 SVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGW 342 (535)
Q Consensus 264 ~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~ 342 (535)
.++++++.|+.+. .+..+|+.. .+-... .-...... +....|||+.+++|+.+ +
T Consensus 194 -~~~~~l~sg~~d~----------------~v~~wd~~~--~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~d-~---- 248 (340)
T 1got_B 194 -PDTRLFVSGACDA----------------SAKLWDVRE--GMCRQTFTGHESDIN-AICFFPNGNAFATGSDD-A---- 248 (340)
T ss_dssp -TTSSEEEEEETTS----------------CEEEEETTT--CSEEEEECCCSSCEE-EEEECTTSSEEEEEETT-S----
T ss_pred -CCCCEEEEEeCCC----------------cEEEEECCC--CeeEEEEcCCcCCEE-EEEEcCCCCEEEEEcCC-C----
Confidence 2678888888652 233445432 111111 11222222 23556899999998865 2
Q ss_pred ccCCCCccccEEEeCCCCCCCcee-ecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 343 ELGRDPVLAPVVYRPDNIPGSRFD-LQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 343 ~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
++.+||..+. +-. ....... ...-......|||+++++|+..
T Consensus 249 --------~v~iwd~~~~---~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 249 --------TCRLFDLRAD---QELMTYSHDNI-ICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp --------CEEEEETTTT---EEEEEECCTTC-CSCEEEEEECTTSSEEEEEETT
T ss_pred --------cEEEEECCCC---cEEEEEccCCc-ccceEEEEECCCCCEEEEECCC
Confidence 5689998776 422 1111110 0011234467999999999853
No 49
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.43 E-value=0.042 Score=56.71 Aligned_cols=147 Identities=11% Similarity=0.090 Sum_probs=79.4
Q ss_pred CCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcc--ccccccccceecC-CCcEEEEcCCCCCCCe
Q 009420 48 NDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFV--QSNVWCSSGAVRP-DGVLIQTGGFNDGEKK 124 (535)
Q Consensus 48 ~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~--~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~ 124 (535)
++++++.|+.+ | .+.+||..+++-..+.. .+.....+..+.+ |+.+++.|+.+ ..
T Consensus 131 ~~~~lasGs~d----------g---------~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D---~~ 188 (435)
T 4e54_B 131 HPSTVAVGSKG----------G---------DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME---GT 188 (435)
T ss_dssp CTTCEEEEETT----------S---------CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS---SC
T ss_pred CCCEEEEEeCC----------C---------EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC---CE
Confidence 56777777643 2 47899998776433221 1222222233443 78899998874 57
Q ss_pred EEEEcCCCCCCCCceecCCC-CcccccceEEEecCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcc
Q 009420 125 IRSFVPCNDESCDWKEIDGL-GARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYP 203 (535)
Q Consensus 125 v~~ydp~~~~~~~W~~~~~m-~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp 203 (535)
+++||.. ++.......- ....+..+.+.-+||+++++|+.++ .+.+|.... .. +..+....+ . --
T Consensus 189 v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-~i~~wd~~~-~~---~~~~~~h~~-----~-v~ 254 (435)
T 4e54_B 189 TRLQDFK---GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG-NVILLNMDG-KE---LWNLRMHKK-----K-VT 254 (435)
T ss_dssp EEEEETT---SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS-BEEEEESSS-CB---CCCSBCCSS-----C-EE
T ss_pred EEEeecc---CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC-cEeeeccCc-ce---eEEEecccc-----e-EE
Confidence 8999987 5443333221 2223344566667999999998765 455552221 01 000111000 0 00
Q ss_pred eEEEeeCCc-EEEEec--CeEEEEECCCCe
Q 009420 204 FVFLNVDGF-LFIFAN--NRAILFDYVNNK 230 (535)
Q Consensus 204 ~~~~~~dG~-ifv~gg--~~~~~yDp~t~~ 230 (535)
.+...|+++ +++.|+ ..+.+||..+.+
T Consensus 255 ~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 255 HVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp EEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred eeeecCCCceEEEEecCcceeeEEeccccc
Confidence 122345664 666664 457789987654
No 50
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.43 E-value=0.027 Score=56.15 Aligned_cols=95 Identities=11% Similarity=0.006 Sum_probs=49.9
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCC-CCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEec
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFN-DGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~-~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~ 157 (535)
.+..+|+++++++.+.......-...++-+||+.+.++... +....+.+|+...+ +.+.+.+......-..+....+
T Consensus 30 ~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~-~g~~~~~~~~~~~~~~p~~~~~- 107 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE-KGTLHLLNTQKTMGADPCYLTT- 107 (361)
T ss_dssp EEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT-TTEEEEEEEEECSSSCEEEEEE-
T ss_pred EEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC-CCcEEEeeEeccCCCCcEEEEE-
Confidence 45677899999987764322222234556789854444432 12346665554310 4555555433322223333444
Q ss_pred CCcEEEEcCccCCeeEEE
Q 009420 158 DGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 158 dG~vyvvGG~~~~~~E~y 175 (535)
||+.+++.......+.+|
T Consensus 108 dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp CSSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEECCCCEEEEE
Confidence 777555554444566677
No 51
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.38 E-value=0.0065 Score=60.39 Aligned_cols=104 Identities=9% Similarity=0.063 Sum_probs=61.6
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc--cccccccceecCC--CcEEEEcCCCCC
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ--SNVWCSSGAVRPD--GVLIQTGGFNDG 121 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~d--G~l~v~GG~~~g 121 (535)
-++++.++.|+.+ | .+.+||...+++..+... +.....+..+.++ ++++++|+.+
T Consensus 20 s~~~~~l~~~~~d----------g---------~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-- 78 (379)
T 3jrp_A 20 DYYGKRLATCSSD----------K---------TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-- 78 (379)
T ss_dssp CSSSSEEEEEETT----------S---------CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--
T ss_pred cCCCCEEEEEECC----------C---------cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC--
Confidence 3688888888754 2 478899887776665432 2222222333345 8999998874
Q ss_pred CCeEEEEcCCCCCCCCceecCCCCc-ccccceEEEecC--CcEEEEcCccCCeeEEE
Q 009420 122 EKKIRSFVPCNDESCDWKEIDGLGA-RRWYATDHILPD--GRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 122 ~~~v~~ydp~~~~~~~W~~~~~m~~-~R~y~s~~~L~d--G~vyvvGG~~~~~~E~y 175 (535)
..+.+||.. +.+|.....+.. ...-.+++..++ ++.+++|+.++ .+.+|
T Consensus 79 -g~v~iwd~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-~i~v~ 130 (379)
T 3jrp_A 79 -GKVLIWKEE---NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-KVSVV 130 (379)
T ss_dssp -SCEEEEEEE---TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-EEEEE
T ss_pred -CEEEEEEcC---CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC-cEEEE
Confidence 568999987 666655443321 122223444455 77777776653 34444
No 52
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.38 E-value=0.017 Score=57.27 Aligned_cols=181 Identities=12% Similarity=0.099 Sum_probs=91.1
Q ss_pred ccCCCceEEcccCC-CcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc--ccc
Q 009420 23 DAAGGGWQLLQKSI-GISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ--SNV 99 (535)
Q Consensus 23 ~~~~g~W~~l~~~~-~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~--~~~ 99 (535)
+..+|+++.+.... ...+...+.-++|++|+.+... . ...+.+||..+++++.+... ...
T Consensus 24 d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~--~---------------~~~v~~~~~~~g~~~~~~~~~~~~~ 86 (347)
T 3hfq_A 24 DTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED--D---------------EGGIAAWQIDGQTAHKLNTVVAPGT 86 (347)
T ss_dssp ETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET--T---------------EEEEEEEEEETTEEEEEEEEEEESC
T ss_pred cCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC--C---------------CceEEEEEecCCcEEEeeeeecCCC
Confidence 44566666532211 1223334455799977776421 0 12578999988888776532 122
Q ss_pred ccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCc------c----cccceEEEecCCcEEEEcCccC
Q 009420 100 WCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGA------R----RWYATDHILPDGRIIIIGGRRQ 169 (535)
Q Consensus 100 ~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~------~----R~y~s~~~L~dG~vyvvGG~~~ 169 (535)
.....++-+||+.+++.+..+ ..+.+||... ..+...+..+.. . ..-+.++.-+||++|+.+.. .
T Consensus 87 ~p~~~a~spdg~~l~~~~~~~--~~v~v~~~~~--~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-~ 161 (347)
T 3hfq_A 87 PPAYVAVDEARQLVYSANYHK--GTAEVMKIAA--DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-S 161 (347)
T ss_dssp CCSEEEEETTTTEEEEEETTT--TEEEEEEECT--TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-T
T ss_pred CCEEEEECCCCCEEEEEeCCC--CEEEEEEeCC--CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-C
Confidence 222345668998555554322 5688888742 223333221111 1 11234667779997766543 3
Q ss_pred CeeEEE-eCCCCCCeeeeccccccCCccccCCCcce-EEEeeCCc-EEEEec--CeEEEEECC--CCeEE
Q 009420 170 FNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPF-VFLNVDGF-LFIFAN--NRAILFDYV--NNKVV 232 (535)
Q Consensus 170 ~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~-~~~~~dG~-ifv~gg--~~~~~yDp~--t~~W~ 232 (535)
..+.+| ...+ ........... .....|. ....|||+ +|+.+. ..+.+||.. ++++.
T Consensus 162 ~~v~~~~~~~~-g~~~~~~~~~~------~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~ 224 (347)
T 3hfq_A 162 DKVYVYNVSDA-GQLSEQSVLTM------EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFT 224 (347)
T ss_dssp TEEEEEEECTT-SCEEEEEEEEC------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred CEEEEEEECCC-CcEEEeeeEEc------CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceE
Confidence 456667 4321 12221110000 0111233 45568998 666543 456666655 46553
No 53
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.35 E-value=0.035 Score=54.13 Aligned_cols=142 Identities=12% Similarity=0.041 Sum_probs=71.4
Q ss_pred eeEEEECC-CCCEEECccc-cccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEe
Q 009420 79 HSVEYSVL-TNEFRPLFVQ-SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHIL 156 (535)
Q Consensus 79 ~~~~yDp~-t~~w~~~~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L 156 (535)
.+.+||.. +++++.+... ......+.++-+||+.+++++..+ ..+.+||.... +.++..+..+.....-...+.-
T Consensus 16 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s 92 (343)
T 1ri6_A 16 QIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE--FRVLAYRIAPD-DGALTFAAESALPGSLTHISTD 92 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT--TEEEEEEECTT-TCCEEEEEEEECSSCCSEEEEC
T ss_pred eEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC--CeEEEEEecCC-CCceeeccccccCCCCcEEEEc
Confidence 46777763 4555544321 222223345667998666655432 56777765410 4566655433322223345566
Q ss_pred cCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcce-EEEeeCCc-EEEEe--cCeEEEEECCC-Ce
Q 009420 157 PDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPF-VFLNVDGF-LFIFA--NNRAILFDYVN-NK 230 (535)
Q Consensus 157 ~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~-~~~~~dG~-ifv~g--g~~~~~yDp~t-~~ 230 (535)
+||+.+++++.....+.+| ... .........+.. ...+. ....+||+ ||+.+ +..+.+||..+ ++
T Consensus 93 ~dg~~l~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~--------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 93 HQGQFVFVGSYNAGNVSVTRLED-GLPVGVVDVVEG--------LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEEET-TEEEEEEEEECC--------CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCCCEEEEEecCCCeEEEEECCC-CccccccccccC--------CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 7888555555444456666 321 111111111100 00122 34567886 66554 35788999887 55
Q ss_pred EE
Q 009420 231 VV 232 (535)
Q Consensus 231 W~ 232 (535)
..
T Consensus 164 ~~ 165 (343)
T 1ri6_A 164 LV 165 (343)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 54
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.34 E-value=0.001 Score=66.85 Aligned_cols=63 Identities=8% Similarity=-0.004 Sum_probs=42.2
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc--cccccccceecCCCcEEEEcCCCCCCCe
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ--SNVWCSSGAVRPDGVLIQTGGFNDGEKK 124 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~ 124 (535)
++|++++.|+.+ | .+.+||..++.|..+... +.....+..+.++|+++++|+.+ ..
T Consensus 21 ~~g~~l~~~~~d----------~---------~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~ 78 (377)
T 3dwl_C 21 SQRTEFVTTTAT----------N---------QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD---RN 78 (377)
T ss_dssp SSSSEEECCCSS----------S---------CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT---SS
T ss_pred CCCCEEEEecCC----------C---------EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC---Ce
Confidence 688888877643 1 367899999988777643 22233344566799999998864 57
Q ss_pred EEEEcCC
Q 009420 125 IRSFVPC 131 (535)
Q Consensus 125 v~~ydp~ 131 (535)
+.+||..
T Consensus 79 v~vwd~~ 85 (377)
T 3dwl_C 79 AYVYEKR 85 (377)
T ss_dssp EEEC---
T ss_pred EEEEEcC
Confidence 8999987
No 55
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.24 E-value=0.012 Score=59.97 Aligned_cols=50 Identities=10% Similarity=0.141 Sum_probs=28.3
Q ss_pred eeEEEECCCCCEE-----ECcc--ccccccccceecCCC-cEEEEcCCCCCCCeEEEEcCC
Q 009420 79 HSVEYSVLTNEFR-----PLFV--QSNVWCSSGAVRPDG-VLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 79 ~~~~yDp~t~~w~-----~~~~--~~~~~c~~~~~l~dG-~l~v~GG~~~g~~~v~~ydp~ 131 (535)
.+.+||..+++.. ++.. .+.....+..+.++| .+++.|+.+ ..+.+||..
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~ 162 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD---NVILVWDVG 162 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT---SCEEEEETT
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC---CEEEEEECC
Confidence 4678888776431 1211 122222234455676 578887763 468888876
No 56
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.21 E-value=0.054 Score=60.27 Aligned_cols=233 Identities=11% Similarity=0.059 Sum_probs=122.6
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeE
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKI 125 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v 125 (535)
-++|+.++.|+.+ | .+.+||..+++....-..+.....+.++.+||+.+++|+.+ ..+
T Consensus 22 sp~~~~la~~~~~----------g---------~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i 79 (814)
T 3mkq_A 22 HPTEPWVLTTLYS----------G---------RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRI 79 (814)
T ss_dssp CSSSSEEEEEETT----------S---------EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEE
T ss_pred CCCCCEEEEEeCC----------C---------EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC---CeE
Confidence 3688888888743 2 57899998876544322333333445567899999999873 579
Q ss_pred EEEcCCCCCCCCceecCCCC-cccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcc
Q 009420 126 RSFVPCNDESCDWKEIDGLG-ARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYP 203 (535)
Q Consensus 126 ~~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp 203 (535)
.+||.. +.+... .+. ....-.+.+.-+||+.+++|+.++ .+.+| ... .+.....+..... .--
T Consensus 80 ~vw~~~---~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg-~i~vw~~~~---~~~~~~~~~~~~~------~v~ 144 (814)
T 3mkq_A 80 RVFNYN---TGEKVV--DFEAHPDYIRSIAVHPTKPYVLSGSDDL-TVKLWNWEN---NWALEQTFEGHEH------FVM 144 (814)
T ss_dssp EEEETT---TCCEEE--EEECCSSCEEEEEECSSSSEEEEEETTS-EEEEEEGGG---TSEEEEEEECCSS------CEE
T ss_pred EEEECC---CCcEEE--EEecCCCCEEEEEEeCCCCEEEEEcCCC-EEEEEECCC---CceEEEEEcCCCC------cEE
Confidence 999987 554322 111 111122455566898888887653 45666 322 2211111111100 001
Q ss_pred eEEEee-CCcEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcc
Q 009420 204 FVFLNV-DGFLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAY 280 (535)
Q Consensus 204 ~~~~~~-dG~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~ 280 (535)
.+...| +|++++.++ ..+.+||..+.+-...+. ....... ......|. .+++.+++|+.+.
T Consensus 145 ~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~---~~~~~~v---~~~~~~~~-------~~~~~l~~~~~dg--- 208 (814)
T 3mkq_A 145 CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT---TGQERGV---NYVDYYPL-------PDKPYMITASDDL--- 208 (814)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEE---CCCTTCC---CEEEECCS-------TTCCEEEEECTTS---
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEe---cCCCCCE---EEEEEEEC-------CCCCEEEEEeCCC---
Confidence 123345 777887775 467889986644221121 1000110 11222221 1677888887652
Q ss_pred cccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCC
Q 009420 281 EQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDN 359 (535)
Q Consensus 281 ~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t 359 (535)
.+..+|+.. .+-... .-..... ......|+|+++++|+.+ | .+.+||..+
T Consensus 209 -------------~i~~~d~~~--~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d-g------------~v~vwd~~~ 259 (814)
T 3mkq_A 209 -------------TIKIWDYQT--KSCVATLEGHMSNV-SFAVFHPTLPIIISGSED-G------------TLKIWNSST 259 (814)
T ss_dssp -------------EEEEEETTT--TEEEEEEECCSSCE-EEEEECSSSSEEEEEETT-S------------CEEEEETTT
T ss_pred -------------EEEEEECCC--CcEEEEEcCCCCCE-EEEEEcCCCCEEEEEeCC-C------------eEEEEECCC
Confidence 233445432 111111 1122222 233567899999988865 2 467888776
Q ss_pred C
Q 009420 360 I 360 (535)
Q Consensus 360 ~ 360 (535)
.
T Consensus 260 ~ 260 (814)
T 3mkq_A 260 Y 260 (814)
T ss_dssp C
T ss_pred C
Confidence 5
No 57
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.21 E-value=0.059 Score=54.00 Aligned_cols=147 Identities=7% Similarity=0.032 Sum_probs=85.0
Q ss_pred eeCC-eEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcc--ccccccccceecC-CCcEEEEcCCCCC
Q 009420 46 LNND-RVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFV--QSNVWCSSGAVRP-DGVLIQTGGFNDG 121 (535)
Q Consensus 46 ~~~g-kv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~--~~~~~c~~~~~l~-dG~l~v~GG~~~g 121 (535)
-+++ ++++.|+.+ | .+.+||..+++...... .+.....+..+.+ ++.++++|+.+
T Consensus 82 ~~~~~~~l~s~~~d----------g---------~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-- 140 (383)
T 3ei3_B 82 HPTHPTTVAVGSKG----------G---------DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-- 140 (383)
T ss_dssp CSSCTTEEEEEEBT----------S---------CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT--
T ss_pred CCCCCCEEEEEcCC----------C---------eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC--
Confidence 3677 788888754 2 47899999887765432 1332233344556 67888888763
Q ss_pred CCeEEEEcCCCCCCCCceecCCCC-cccccceEEEecCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCC
Q 009420 122 EKKIRSFVPCNDESCDWKEIDGLG-ARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENN 200 (535)
Q Consensus 122 ~~~v~~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~ 200 (535)
..+.+||.. ........... ...+-.+.+.-+|++.+++|+.++ .+.+|.... .....+. ....
T Consensus 141 -~~i~iwd~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~i~d~~~-~~~~~~~---~h~~------ 205 (383)
T 3ei3_B 141 -GATTLRDFS---GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG-RLLLLGLDG-HEIFKEK---LHKA------ 205 (383)
T ss_dssp -TEEEEEETT---SCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTS-EEEEEETTS-CEEEEEE---CSSS------
T ss_pred -CEEEEEECC---CCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCC-CEEEEECCC-CEEEEec---cCCC------
Confidence 578999987 44443332211 112233556667899999988764 556663221 1111111 1100
Q ss_pred CcceEEEeeCCc-EEEEec--CeEEEEECCC
Q 009420 201 LYPFVFLNVDGF-LFIFAN--NRAILFDYVN 228 (535)
Q Consensus 201 ~yp~~~~~~dG~-ifv~gg--~~~~~yDp~t 228 (535)
.--.+...++++ +++.|+ ..+.+||..+
T Consensus 206 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 206 KVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred cEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 011234457887 777775 3578999886
No 58
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.20 E-value=0.14 Score=50.40 Aligned_cols=137 Identities=15% Similarity=0.128 Sum_probs=78.0
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCC-cccccceEEEec
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLG-ARRWYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L~ 157 (535)
.+.+||..+++-...-..........++.+||+.+++|+.. ..+.+||.. +.+-. ..+. ....-.+++.-+
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~---~~~~~--~~~~~~~~~v~~~~~sp 174 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVE---SGKKE--YSLDTRGKFILSIAYSP 174 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETT---TCSEE--EEEECSSSCEEEEEECT
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcC---CCcee--EEecCCCceEEEEEECC
Confidence 57899998876433221222222234567899999999874 578899986 33211 1111 112233556667
Q ss_pred CCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecC--eEEEEECCCCeEEE
Q 009420 158 DGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANN--RAILFDYVNNKVVK 233 (535)
Q Consensus 158 dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~--~~~~yDp~t~~W~~ 233 (535)
||+.++.|+.++ .+.+|..... +. ...+..... . --.+...|+|++++.|+. .+.+||..+.+...
T Consensus 175 dg~~lasg~~dg-~i~iwd~~~~-~~--~~~~~~h~~-----~-v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 175 DGKYLASGAIDG-IINIFDIATG-KL--LHTLEGHAM-----P-IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 242 (321)
T ss_dssp TSSEEEEEETTS-CEEEEETTTT-EE--EEEECCCSS-----C-CCEEEECTTSCEEEEECTTSCEEEEETTTCCEEE
T ss_pred CCCEEEEEcCCC-eEEEEECCCC-cE--EEEEcccCC-----c-eeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE
Confidence 999999988764 4666732211 11 111111100 0 112345679998888864 58899998876543
No 59
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.20 E-value=0.099 Score=52.80 Aligned_cols=50 Identities=18% Similarity=0.313 Sum_probs=34.4
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 131 (535)
.+.+||..+++-...-..+.......++.+||+.++.||.+ ..+.+||..
T Consensus 89 ~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d---~~v~iw~~~ 138 (380)
T 3iz6_a 89 RLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD---SACSIFNLS 138 (380)
T ss_dssp EEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS---SCCEEEECC
T ss_pred eEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC---CcEEEEECC
Confidence 57899998876543322333333345577899999999974 567888875
No 60
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.17 E-value=0.079 Score=53.06 Aligned_cols=228 Identities=16% Similarity=0.194 Sum_probs=119.2
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEEeCCCC--CC
Q 009420 105 AVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGA--PN 182 (535)
Q Consensus 105 ~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~--~~ 182 (535)
.+-+||+.++.||.+ ..+.+||.. +.+....-.+. ..+-.+++.-++|+.++.||.++ .+.+|+.... ..
T Consensus 71 ~~s~d~~~l~s~s~D---g~v~vWd~~---~~~~~~~~~~~-~~~v~~~~~sp~g~~lasg~~d~-~i~v~~~~~~~~~~ 142 (354)
T 2pbi_B 71 DWCKDKRRIVSSSQD---GKVIVWDSF---TTNKEHAVTMP-CTWVMACAYAPSGCAIACGGLDN-KCSVYPLTFDKNEN 142 (354)
T ss_dssp EECTTSSEEEEEETT---SEEEEEETT---TCCEEEEEECS-SSCCCEEEECTTSSEEEEESTTS-EEEEEECCCCTTCC
T ss_pred EECCCCCEEEEEeCC---CeEEEEECC---CCCcceEEecC-CCCEEEEEECCCCCEEEEeeCCC-CEEEEEEecccccc
Confidence 345789999999874 579999976 44332211111 23445667778999999999875 4555632210 00
Q ss_pred e-eeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccc
Q 009420 183 V-YSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKN 259 (535)
Q Consensus 183 w-~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~ 259 (535)
. .....+.... ..--.....++++.++.|+ ..+.+||..+++....+ ... . +....+.+.|
T Consensus 143 ~~~~~~~~~~h~------~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~---~~h--~-----~~v~~~~~~~ 206 (354)
T 2pbi_B 143 MAAKKKSVAMHT------NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF---HGH--G-----ADVLCLDLAP 206 (354)
T ss_dssp SGGGCEEEEECS------SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE---ECC--S-----SCEEEEEECC
T ss_pred ccccceeeeccC------CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE---cCC--C-----CCeEEEEEEe
Confidence 0 0000010000 0011223346776666554 46889999988755333 111 0 1111111110
Q ss_pred cCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCCCCC
Q 009420 260 LLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGAGKG 338 (535)
Q Consensus 260 ~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g 338 (535)
..+++.+++|+.+. .+..+|+.. .+.... ........ +....|+|+.+++|+.+ +
T Consensus 207 ----~~~g~~l~sgs~Dg----------------~v~~wd~~~--~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~D-~ 262 (354)
T 2pbi_B 207 ----SETGNTFVSGGCDK----------------KAMVWDMRS--GQCVQAFETHESDVN-SVRYYPSGDAFASGSDD-A 262 (354)
T ss_dssp ----CSSCCEEEEEETTS----------------CEEEEETTT--CCEEEEECCCSSCEE-EEEECTTSSEEEEEETT-S
T ss_pred ----CCCCCEEEEEeCCC----------------eEEEEECCC--CcEEEEecCCCCCeE-EEEEeCCCCEEEEEeCC-C
Confidence 12567888888652 233455442 222221 22222332 23456899999998865 2
Q ss_pred CCCcccCCCCccccEEEeCCCCCCCcee-ecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 339 TAGWELGRDPVLAPVVYRPDNIPGSRFD-LQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 339 ~~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
++.+||..++ +-. ...... ...........|||+++++|+..
T Consensus 263 ------------~v~lwd~~~~---~~~~~~~~~~-~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 263 ------------TCRLYDLRAD---REVAIYSKES-IIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp ------------CEEEEETTTT---EEEEEECCTT-CCSCEEEEEECTTSSEEEEEETT
T ss_pred ------------eEEEEECCCC---cEEEEEcCCC-cccceeEEEEeCCCCEEEEEECC
Confidence 5689998776 422 121111 11112344567899999999854
No 61
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.17 E-value=0.1 Score=50.80 Aligned_cols=139 Identities=9% Similarity=0.095 Sum_probs=67.1
Q ss_pred eeEEEECC--CCCEEECcccc-ccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEE
Q 009420 79 HSVEYSVL--TNEFRPLFVQS-NVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHI 155 (535)
Q Consensus 79 ~~~~yDp~--t~~w~~~~~~~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~ 155 (535)
.+.+||.. +++++.+.... .......++-+||+.+++++..+ ..+.+||..+ .........+.....-...+.
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~ 136 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA--GNVSVTRLED--GLPVGVVDVVEGLDGCHSANI 136 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT--TEEEEEEEET--TEEEEEEEEECCCTTBCCCEE
T ss_pred eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC--CeEEEEECCC--CccccccccccCCCCceEEEE
Confidence 46777766 77887664321 11222344567888555554422 5688888730 112222222222222334556
Q ss_pred ecCCcEEEEcCccCCeeEEE-eCCCCCCeeeec--cccccCCccccCCCcce-EEEeeCCc-EEEEe--cCeEEEEECCC
Q 009420 156 LPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLP--FLVQTNDPRVENNLYPF-VFLNVDGF-LFIFA--NNRAILFDYVN 228 (535)
Q Consensus 156 L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~--~l~~~~~~~~~~~~yp~-~~~~~dG~-ifv~g--g~~~~~yDp~t 228 (535)
-+||+.+++++.....+.+| ...+ .+..... .... .....|. +...++|+ +|+.+ ...+.+||...
T Consensus 137 s~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 137 SPDNRTLWVPALKQDRICLFTVSDD-GHLVAQDPAEVTT------VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTT-SCEEEEEEEEEEC------STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred CCCCCEEEEecCCCCEEEEEEecCC-Cceeeeccccccc------CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 67886444444333456666 3331 1222110 0000 0111233 34567887 66665 24678898843
No 62
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.15 E-value=0.096 Score=55.53 Aligned_cols=242 Identities=12% Similarity=0.123 Sum_probs=124.0
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPD 158 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~d 158 (535)
.+.+||........+... .....+.++.+||+.+++|+.+ ..+++||.. ...-..+..- ...-.+++.-+|
T Consensus 326 ~i~~w~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~~~d---g~v~~~~~~---~~~~~~~~~~--~~~v~~~~~s~d 396 (577)
T 2ymu_A 326 TVKLWNRNGQHLQTLTGH-SSSVWGVAFSPDGQTIASASDD---KTVKLWNRN---GQLLQTLTGH--SSSVRGVAFSPD 396 (577)
T ss_dssp CEEEEETTSCEEEEECCC-SSCEEEEEECTTSSEEEEEETT---SEEEEEETT---CCEEEEEECC--SSCEEEEEECTT
T ss_pred eEEEEeCCCCeeEEEeCC-CCCEEEEEECCCCCEEEEEeCC---CEEEEEcCC---CCEEEEecCC--CCCeEEEEECCC
Confidence 367788766655444322 2222234567899999998763 578899865 3222221111 111124455678
Q ss_pred CcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEEecC
Q 009420 159 GRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVKQYP 236 (535)
Q Consensus 159 G~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~p 236 (535)
|+.++.|+.++ .+.+|.... +.. ..+..... .--.....||++.++.++ ..+.+||....... .+.
T Consensus 397 g~~l~~~~~d~-~v~~~~~~~--~~~--~~~~~~~~------~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~-~~~ 464 (577)
T 2ymu_A 397 GQTIASASDDK-TVKLWNRNG--QLL--QTLTGHSS------SVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQ-TLT 464 (577)
T ss_dssp SSCEEEEETTS-EEEEECTTC--CEE--EEEECCSS------CEEEEEECTTSSEEEEEETTSEEEEEETTSCEEE-EEE
T ss_pred CCEEEEEeCCC-EEEEEeCCC--CEE--EEecCCCC------CeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEE-EEc
Confidence 99998887653 456663321 111 11111100 011234467898888775 45788997655433 232
Q ss_pred CCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCC
Q 009420 237 AIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQP 315 (535)
Q Consensus 237 ~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~ 315 (535)
.. .. +. -+... . .+++++++|+.+. .+..+|.. .+-... .-...
T Consensus 465 ---~~--~~-~v-~~~~~---s------pd~~~las~~~d~----------------~i~iw~~~---~~~~~~~~~h~~ 509 (577)
T 2ymu_A 465 ---GH--SS-SV-RGVAF---S------PDGQTIASASDDK----------------TVKLWNRN---GQLLQTLTGHSS 509 (577)
T ss_dssp ---CC--SS-CE-EEEEE---C------TTSCEEEEEETTS----------------EEEEEETT---SCEEEEEECCSS
T ss_pred ---CC--CC-CE-EEEEE---c------CCCCEEEEEeCCC----------------EEEEEcCC---CCEEEEEeCCCC
Confidence 11 11 00 01122 2 2788888887652 22334422 111111 22222
Q ss_pred ceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCC
Q 009420 316 RVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSN 395 (535)
Q Consensus 316 R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~ 395 (535)
+.. +....|||+.++.|+.+ + .+.+||.... ....+..- .... ......|||+.+++||.
T Consensus 510 ~v~-~l~~s~dg~~l~s~~~d-g------------~v~lwd~~~~---~~~~~~~h-~~~v--~~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 510 SVR-GVAFSPDGQTIASASDD-K------------TVKLWNRNGQ---LLQTLTGH-SSSV--WGVAFSPDGQTIASASS 569 (577)
T ss_dssp CEE-EEEECTTSSCEEEEETT-S------------EEEEECTTSC---EEEEEECC-SSCE--EEEEECTTSSCEEEEET
T ss_pred CEE-EEEEcCCCCEEEEEECc-C------------EEEEEeCCCC---EEEEEcCC-CCCE--EEEEEcCCCCEEEEEeC
Confidence 332 23456899999998765 2 4789995433 44433211 1111 12446799999999886
Q ss_pred C
Q 009420 396 P 396 (535)
Q Consensus 396 ~ 396 (535)
+
T Consensus 570 D 570 (577)
T 2ymu_A 570 D 570 (577)
T ss_dssp T
T ss_pred C
Confidence 4
No 63
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.19 Score=48.05 Aligned_cols=110 Identities=12% Similarity=0.077 Sum_probs=63.0
Q ss_pred eeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCC
Q 009420 40 SMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFN 119 (535)
Q Consensus 40 ~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~ 119 (535)
.+.++..++++.++.|+.+ | .+.+||..+++.......+.....+.++.++++++++|+.+
T Consensus 20 ~v~~~~~~~~~~l~s~~~d----------g---------~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 80 (313)
T 3odt_A 20 DVRDVVAVDDSKVASVSRD----------G---------TVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD 80 (313)
T ss_dssp CEEEEEEEETTEEEEEETT----------S---------EEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT
T ss_pred CcEEEEecCCCEEEEEEcC----------C---------cEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC
Confidence 3444444788888887643 2 57899998776544433333334445567899999999874
Q ss_pred CCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE
Q 009420 120 DGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 120 ~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 175 (535)
..+.+||... .........+......-..... +++.+++|+.++ .+.+|
T Consensus 81 ---g~i~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~-~i~~~ 129 (313)
T 3odt_A 81 ---TMINGVPLFA--TSGEDPLYTLIGHQGNVCSLSF-QDGVVISGSWDK-TAKVW 129 (313)
T ss_dssp ---SCEEEEETTC--CTTSCC-CEECCCSSCEEEEEE-ETTEEEEEETTS-EEEEE
T ss_pred ---CeEEEEEeee--cCCCCcccchhhcccCEEEEEe-cCCEEEEEeCCC-CEEEE
Confidence 4577777652 1222222222222222223333 688888887764 34444
No 64
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.15 E-value=0.17 Score=48.42 Aligned_cols=68 Identities=12% Similarity=0.086 Sum_probs=38.6
Q ss_pred EEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc---c-c-ccccccee-cCCCcEEEEc
Q 009420 43 MQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ---S-N-VWCSSGAV-RPDGVLIQTG 116 (535)
Q Consensus 43 ~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~---~-~-~~c~~~~~-l~dG~l~v~G 116 (535)
.++-++|++|+.+..+ ..+.+||+.......+... . . ....+.++ -.+|+||+.+
T Consensus 35 v~~~~~g~l~v~~~~~-------------------~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~ 95 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNN-------------------HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTE 95 (286)
T ss_dssp EEECTTCCEEEEEGGG-------------------TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEECCC-------------------CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEc
Confidence 3334689999887532 1467889875544443321 0 1 11222333 2689999987
Q ss_pred CCCCCCCeEEEEcCC
Q 009420 117 GFNDGEKKIRSFVPC 131 (535)
Q Consensus 117 G~~~g~~~v~~ydp~ 131 (535)
... ...+.+||+.
T Consensus 96 ~~~--~~~i~~~d~~ 108 (286)
T 1q7f_A 96 RSP--THQIQIYNQY 108 (286)
T ss_dssp CGG--GCEEEEECTT
T ss_pred CCC--CCEEEEECCC
Confidence 421 2578899965
No 65
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.13 E-value=0.091 Score=52.76 Aligned_cols=291 Identities=10% Similarity=0.056 Sum_probs=126.7
Q ss_pred cCCCceEEcccCC--CcceeEEEEe-eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECc----cc
Q 009420 24 AAGGGWQLLQKSI--GISSMHMQLL-NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLF----VQ 96 (535)
Q Consensus 24 ~~~g~W~~l~~~~--~~~~~~~~~~-~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~----~~ 96 (535)
.+...|..-+..+ -.+.+.++.. +||++++-++.+. . .+ =+ ..+.+|+..++.-.... ..
T Consensus 26 ~~~~~w~~p~~~p~~H~~~V~~v~fSpDG~~las~s~d~-~-~~--wd---------~~v~~~~~~~~~~~~~~~~~~~~ 92 (357)
T 4g56_B 26 SKGSAWGRPVTAPACMEVQIGAVRYRRDGALLLAASSLS-S-RT--WG---------GSIWVFKDPEGAPNESLCTAGVQ 92 (357)
T ss_dssp --------------CCCSEEEEEEECSSSCEEEEEECSS-S-SS--CC---------EEEEEESSCC---CGGGCSEEEE
T ss_pred ccccccCCCCCCcccccCCEEEEEECCCCCEEEEEcCCC-C-cc--cc---------CeEEEEECCCCCcceeEecccCC
Confidence 3345687532222 1233444444 7999998887541 1 11 01 24677776654321111 01
Q ss_pred cccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCC---CcccccceEEEecCCcEEEEcCccCCeeE
Q 009420 97 SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGL---GARRWYATDHILPDGRIIIIGGRRQFNYE 173 (535)
Q Consensus 97 ~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m---~~~R~y~s~~~L~dG~vyvvGG~~~~~~E 173 (535)
+.......++.+|+++++.+.. ..+++||.. +.+-...... .....-.+++..+||+.++.|+.++ .+.
T Consensus 93 ~~~~V~~~~~s~d~~~l~~s~d----g~v~lWd~~---~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-~v~ 164 (357)
T 4g56_B 93 TEAGVTDVAWVSEKGILVASDS----GAVELWEIL---EKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-SVK 164 (357)
T ss_dssp CSSCEEEEEEETTTEEEEEETT----SCEEEC-----------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-CEE
T ss_pred CCCCEEEEEEcCCCCEEEEECC----CEEEEeecc---ccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-eEE
Confidence 1111223446678988775543 469999987 4332211111 1112223556677999999988764 456
Q ss_pred EE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCC-cEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCC
Q 009420 174 FY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDG-FLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSS 249 (535)
Q Consensus 174 ~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG-~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~ 249 (535)
+| ..+. +. ...+..... .--.+...+++ .+++.++ ..+.+||.++.+-. ..+........
T Consensus 165 iwd~~~~--~~--~~~~~~h~~------~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~---~~~~~~~~~~~--- 228 (357)
T 4g56_B 165 VWDLSQK--AV--LKSYNAHSS------EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA---TRIDFCASDTI--- 228 (357)
T ss_dssp EEETTTT--EE--EEEECCCSS------CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB---CBCCCTTCCSC---
T ss_pred EEECCCC--cE--EEEEcCCCC------CEEEEEEccCCCceeeeeccCCceEEEECCCCcee---eeeeecccccc---
Confidence 66 3321 11 111111100 00012234555 3666654 46888998876532 11121101110
Q ss_pred CceE-eecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeecCCCCceeceeEEccCC-
Q 009420 250 GSAV-LLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNG- 327 (535)
Q Consensus 250 g~~v-~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~~~R~~~~~v~lpdG- 327 (535)
-.++ ..| .+++++++|+.+. .+..+|+......- .......... ....-|+|
T Consensus 229 v~~v~~sp--------~~~~~la~g~~d~----------------~i~~wd~~~~~~~~-~~~~~~~~v~-~l~~sp~~~ 282 (357)
T 4g56_B 229 PTSVTWHP--------EKDDTFACGDETG----------------NVSLVNIKNPDSAQ-TSAVHSQNIT-GLAYSYHSS 282 (357)
T ss_dssp EEEEEECT--------TSTTEEEEEESSS----------------CEEEEESSCGGGCE-EECCCSSCEE-EEEECSSSS
T ss_pred ccchhhhh--------cccceEEEeeccc----------------ceeEEECCCCcEeE-EEeccceeEE-EEEEcCCCC
Confidence 1122 112 2567888887541 23455554211111 1122222222 22334676
Q ss_pred eEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecC-CCcEEEecCCC
Q 009420 328 NVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLR-DGRVLVGGSNP 396 (535)
Q Consensus 328 ~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~Llp-DG~V~v~GG~~ 396 (535)
++++.|+.+ + ++.+||.++. +-...-. ..... ......| |+++++.||.+
T Consensus 283 ~~lasgs~D-~------------~i~iwd~~~~---~~~~~~~-H~~~V--~~vafsP~d~~~l~s~s~D 333 (357)
T 4g56_B 283 PFLASISED-C------------TVAVLDADFS---EVFRDLS-HRDFV--TGVAWSPLDHSKFTTVGWD 333 (357)
T ss_dssp CCEEEEETT-S------------CEEEECTTSC---EEEEECC-CSSCE--EEEEECSSSTTEEEEEETT
T ss_pred CEEEEEeCC-C------------EEEEEECCCC---cEeEECC-CCCCE--EEEEEeCCCCCEEEEEcCC
Confidence 567777654 2 5789998876 4332211 00111 1223345 89999999864
No 66
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.11 E-value=0.046 Score=58.27 Aligned_cols=268 Identities=7% Similarity=-0.021 Sum_probs=135.2
Q ss_pred EEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCC----C-EEECccccccc-cccceecC--CCcEEE
Q 009420 43 MQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTN----E-FRPLFVQSNVW-CSSGAVRP--DGVLIQ 114 (535)
Q Consensus 43 ~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~----~-w~~~~~~~~~~-c~~~~~l~--dG~l~v 114 (535)
.+.-++|+.+++++ + ..+.+||..++ + -..+. .+... -.+.++.+ ||++++
T Consensus 24 ~~~spdg~~l~~~~-~-------------------~~v~v~~~~~~~~~~~~~~~~~-~h~~~~v~~~~~sp~~~~~~l~ 82 (615)
T 1pgu_A 24 LSYDPTTNAIAYPC-G-------------------KSAFVRCLDDGDSKVPPVVQFT-GHGSSVVTTVKFSPIKGSQYLC 82 (615)
T ss_dssp CEEETTTTEEEEEE-T-------------------TEEEEEECCSSCCSSCSEEEEC-TTTTSCEEEEEECSSTTCCEEE
T ss_pred EEECCCCCEEEEec-C-------------------CeEEEEECCCCCCccccceEEe-cCCCceEEEEEECcCCCCCEEE
Confidence 33447999888886 2 14789999876 3 22222 22222 22345668 999999
Q ss_pred EcCCCCCCCeEEEEcCCCCCCC------CceecCCCC-cccccceEEEecCCcEEEEcCccCC---eeEEEeCCCCCCee
Q 009420 115 TGGFNDGEKKIRSFVPCNDESC------DWKEIDGLG-ARRWYATDHILPDGRIIIIGGRRQF---NYEFYPKNGAPNVY 184 (535)
Q Consensus 115 ~GG~~~g~~~v~~ydp~~~~~~------~W~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~---~~E~yP~~~~~~w~ 184 (535)
+|+.+ ..+.+||.. +. +......+. ....-.+++.-+||+.+++++.+.. .+.+|... +.
T Consensus 83 s~~~d---g~v~vw~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~---~~- 152 (615)
T 1pgu_A 83 SGDES---GKVIVWGWT---FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG---NS- 152 (615)
T ss_dssp EEETT---SEEEEEEEE---EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC---CE-
T ss_pred EecCC---CEEEEEeCC---CCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC---Cc-
Confidence 99873 578888874 22 222222221 1222335566678999988886532 23333211 11
Q ss_pred eeccccccCCccccCCCcceEEEeeCCc-EEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccC
Q 009420 185 SLPFLVQTNDPRVENNLYPFVFLNVDGF-LFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLL 261 (535)
Q Consensus 185 ~~~~l~~~~~~~~~~~~yp~~~~~~dG~-ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~ 261 (535)
...+.... ..--.....++|+ +++.|+ ..+.+||..+.+-...+ ........ ...-+...
T Consensus 153 -~~~~~~~~------~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~---~~~~~~~~----~v~~~~~~--- 215 (615)
T 1pgu_A 153 -LGEVSGHS------QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD---RTHHKQGS----FVRDVEFS--- 215 (615)
T ss_dssp -EEECCSCS------SCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE---CSSSCTTC----CEEEEEEC---
T ss_pred -ceeeecCC------ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee---cccCCCCc----eEEEEEEC---
Confidence 10111100 0011234456776 666665 46889998887655433 21101000 11111111
Q ss_pred CCCCC-cEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee--c---CCCCceeceeEEccCCeEEEEcCC
Q 009420 262 APSVA-AEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE--T---MPQPRVMGDMTLLPNGNVLLINGA 335 (535)
Q Consensus 262 ~~~~~-gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~--~---m~~~R~~~~~v~lpdG~I~vvGG~ 335 (535)
.+ ++.+++|+.+. .+..+|+.. .+.... . -...... +.... +++.+++++.
T Consensus 216 ---~~~~~~l~~~~~dg----------------~i~vwd~~~--~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~l~~~~~ 272 (615)
T 1pgu_A 216 ---PDSGEFVITVGSDR----------------KISCFDGKS--GEFLKYIEDDQEPVQGGIF-ALSWL-DSQKFATVGA 272 (615)
T ss_dssp ---STTCCEEEEEETTC----------------CEEEEETTT--CCEEEECCBTTBCCCSCEE-EEEES-SSSEEEEEET
T ss_pred ---CCCCCEEEEEeCCC----------------eEEEEECCC--CCEeEEecccccccCCceE-EEEEc-CCCEEEEEcC
Confidence 15 78888887642 234455442 121111 1 1122222 22334 8999998876
Q ss_pred CCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCC-CCcccccceeecCCCcEEEecCCCC
Q 009420 336 GKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPST-IPRMYHSTAVLLRDGRVLVGGSNPH 397 (535)
Q Consensus 336 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~-~~R~yhs~a~LlpDG~V~v~GG~~~ 397 (535)
+ + .+.+||..+. +-...-... .+......++..++++.+++|+...
T Consensus 273 d-~------------~i~~wd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 319 (615)
T 1pgu_A 273 D-A------------TIRVWDVTTS---KCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 319 (615)
T ss_dssp T-S------------EEEEEETTTT---EEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTS
T ss_pred C-C------------cEEEEECCCC---cEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCC
Confidence 5 2 4689998876 432211111 1111112344446888888887654
No 67
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.11 E-value=0.0057 Score=68.54 Aligned_cols=103 Identities=9% Similarity=0.079 Sum_probs=62.7
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc--cccccccceecCC--CcEEEEcCCCCCC
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ--SNVWCSSGAVRPD--GVLIQTGGFNDGE 122 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~d--G~l~v~GG~~~g~ 122 (535)
++|+.++.|+.+ | .+.+||..++++..+... +.....+..+.++ |.++++|+.+
T Consensus 19 ~dg~~latg~~d----------g---------~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D--- 76 (753)
T 3jro_A 19 YYGKRLATCSSD----------K---------TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD--- 76 (753)
T ss_dssp SSSCCEEEEETT----------T---------EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT---
T ss_pred CCCCeEEEEECC----------C---------cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC---
Confidence 588888887643 2 578999887777665432 2222223334455 8999999874
Q ss_pred CeEEEEcCCCCCCCCceecCCCCcc-cccceEEEecC--CcEEEEcCccCCeeEEE
Q 009420 123 KKIRSFVPCNDESCDWKEIDGLGAR-RWYATDHILPD--GRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 123 ~~v~~ydp~~~~~~~W~~~~~m~~~-R~y~s~~~L~d--G~vyvvGG~~~~~~E~y 175 (535)
..+.+||.. +.+|.....+... ..-.+++..++ |+++++|+.++ .+.+|
T Consensus 77 g~I~vwd~~---~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg-~I~vw 128 (753)
T 3jro_A 77 GKVLIWKEE---NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-KVSVV 128 (753)
T ss_dssp SCEEEEEEE---TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-EEEEE
T ss_pred CeEEEEECC---CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC-cEEEE
Confidence 568999987 6666554433221 22223444455 77888887654 34444
No 68
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.10 E-value=0.14 Score=50.98 Aligned_cols=185 Identities=12% Similarity=0.071 Sum_probs=85.0
Q ss_pred ccCCCceEEcccCCCcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcccc-cccc
Q 009420 23 DAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQS-NVWC 101 (535)
Q Consensus 23 ~~~~g~W~~l~~~~~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~-~~~c 101 (535)
+...|+++.+.......+.+.+.-++|+.++....+... +| .-.+..+|+.+++.+.+.... ....
T Consensus 35 d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~------~~-------~v~~~~~~~~~g~~~~~~~~~~~~~~ 101 (361)
T 3scy_A 35 NEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKD------QA-------AVSAFAFDKEKGTLHLLNTQKTMGAD 101 (361)
T ss_dssp ETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSST------TC-------EEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred eCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCC------CC-------cEEEEEEeCCCCcEEEeeEeccCCCC
Confidence 445566665543222223344555788744444322000 12 112334456667777765322 1112
Q ss_pred ccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCC-------C-----cccccceEEEecCCc-EEEEcCcc
Q 009420 102 SSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGL-------G-----ARRWYATDHILPDGR-IIIIGGRR 168 (535)
Q Consensus 102 ~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m-------~-----~~R~y~s~~~L~dG~-vyvvGG~~ 168 (535)
...... ||+.+++.... ...+.+||... .......... + ....-++++.-+||+ +|+.+ ..
T Consensus 102 p~~~~~-dg~~l~~~~~~--~~~v~~~~~~~--~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~-~~ 175 (361)
T 3scy_A 102 PCYLTT-NGKNIVTANYS--GGSITVFPIGQ--DGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADD-LG 175 (361)
T ss_dssp EEEEEE-CSSEEEEEETT--TTEEEEEEBCT--TSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEE-TT
T ss_pred cEEEEE-CCCEEEEEECC--CCEEEEEEeCC--CCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEe-CC
Confidence 222333 77755554432 25788888752 1122111100 0 011124567778998 55544 33
Q ss_pred CCeeEEE-eCCCCC----C-eeee---ccccccCCccccCCCcce-EEEeeCCc-EEEEe--cCeEEEEECCCCeEE
Q 009420 169 QFNYEFY-PKNGAP----N-VYSL---PFLVQTNDPRVENNLYPF-VFLNVDGF-LFIFA--NNRAILFDYVNNKVV 232 (535)
Q Consensus 169 ~~~~E~y-P~~~~~----~-w~~~---~~l~~~~~~~~~~~~yp~-~~~~~dG~-ifv~g--g~~~~~yDp~t~~W~ 232 (535)
...+.+| -..... + .... ..... .....|+ ....|||+ +|+.. ++.+.+||..+++..
T Consensus 176 ~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 176 TDQIHKFNINPNANADNKEKFLTKGTPEAFKV------APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp TTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC------CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred CCEEEEEEEcCCCCcccccceeecccccceec------CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence 3456666 322111 1 1100 00000 0112343 45567997 66665 356889998877654
No 69
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.06 E-value=0.04 Score=56.09 Aligned_cols=63 Identities=10% Similarity=0.053 Sum_probs=42.7
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEE
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIR 126 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~ 126 (535)
++|+.++.|+.+ | .+.+||..+++....-..+.....+..+.++|+.++.|+.+ ..++
T Consensus 133 ~dg~~l~s~~~d----------~---------~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~v~ 190 (393)
T 1erj_A 133 PDGKFLATGAED----------R---------LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD---RTVR 190 (393)
T ss_dssp TTSSEEEEEETT----------S---------CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEE
T ss_pred CCCCEEEEEcCC----------C---------eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC---CcEE
Confidence 688888887753 2 47899998876543322233222334466799999988764 6799
Q ss_pred EEcCC
Q 009420 127 SFVPC 131 (535)
Q Consensus 127 ~ydp~ 131 (535)
+||..
T Consensus 191 iwd~~ 195 (393)
T 1erj_A 191 IWDLR 195 (393)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99987
No 70
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.06 E-value=0.042 Score=55.24 Aligned_cols=147 Identities=12% Similarity=-0.005 Sum_probs=75.6
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeE
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKI 125 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v 125 (535)
-++++.++.|+.+ | .+.+||........+. .+.....+..+.++|+.+++|+.+ ..+
T Consensus 117 s~~~~~l~~~~~d----------g---------~i~i~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d---~~i 173 (425)
T 1r5m_A 117 SHDGNSIVTGVEN----------G---------ELRLWNKTGALLNVLN-FHRAPIVSVKWNKDGTHIISMDVE---NVT 173 (425)
T ss_dssp CTTSSEEEEEETT----------S---------CEEEEETTSCEEEEEC-CCCSCEEEEEECTTSSEEEEEETT---CCE
T ss_pred cCCCCEEEEEeCC----------C---------eEEEEeCCCCeeeecc-CCCccEEEEEECCCCCEEEEEecC---CeE
Confidence 3688888888753 2 4678884433333332 222222334566799988888763 468
Q ss_pred EEEcCCCCCCCCceecCCCCcc--------------cccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeecccc
Q 009420 126 RSFVPCNDESCDWKEIDGLGAR--------------RWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLV 190 (535)
Q Consensus 126 ~~ydp~~~~~~~W~~~~~m~~~--------------R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~ 190 (535)
.+||.. +.+....-..... ....+++..++ ..+++|+.++ .+.+| .... .....+.
T Consensus 174 ~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g-~i~~~d~~~~-~~~~~~~--- 244 (425)
T 1r5m_A 174 ILWNVI---SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKG-AIFVYQITEK-TPTGKLI--- 244 (425)
T ss_dssp EEEETT---TTEEEEEECCC---------------CCCBSCCEEEET-TEEEEECGGG-CEEEEETTCS-SCSEEEC---
T ss_pred EEEECC---CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEEcCCC-eEEEEEcCCC-ceeeeec---
Confidence 888876 3332211111111 11234445545 4566777654 35566 3221 0111111
Q ss_pred ccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCe
Q 009420 191 QTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNK 230 (535)
Q Consensus 191 ~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~ 230 (535)
... ..--.....++|++++.++ ..+.+||..+.+
T Consensus 245 ~~~------~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 280 (425)
T 1r5m_A 245 GHH------GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN 280 (425)
T ss_dssp CCS------SCEEEEEEETTTTEEEEEETTSCEEEECSSSBS
T ss_pred cCC------CceEEEEECCCCCEEEEEcCCCEEEEEECCCCc
Confidence 000 0011234457888887775 457889987754
No 71
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.06 E-value=0.084 Score=54.01 Aligned_cols=133 Identities=11% Similarity=0.047 Sum_probs=73.4
Q ss_pred eeEEEECCCCCEEECccc--cccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEe
Q 009420 79 HSVEYSVLTNEFRPLFVQ--SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHIL 156 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L 156 (535)
.+.+||..|++...+-.. +...-.+.++.+||+.+++|+.+ ..+++||.. +.+- +..+...... ..+.-
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D---g~v~iWd~~---~~~~--~~~~~~h~~~-v~~~s 196 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ---QQKR--LRNMTSHSAR-VGSLS 196 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT---TTEE--EEEECCCSSC-EEEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC---CeEEEEEcC---CCcE--EEEEeCCCCc-eEEEe
Confidence 688999999987765432 22222344567899999999874 579999987 4432 2222211111 22233
Q ss_pred cCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCe
Q 009420 157 PDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNK 230 (535)
Q Consensus 157 ~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~ 230 (535)
.|+++++.|+.+. .+.++ .... .. ....+..... ........++|+.++.++ +.+.+||..+++
T Consensus 197 ~~~~~l~sgs~d~-~i~~~d~~~~--~~-~~~~~~~h~~------~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 197 WNSYILSSGSRSG-HIHHHDVRVA--EH-HVATLSGHSQ------EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp EETTEEEEEETTS-EEEEEETTSS--SC-EEEEEECCSS------CEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred eCCCEEEEEeCCC-ceeEeeeccc--ce-eeEEeccccc------ceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 4789999888764 33344 2211 11 1111111100 011234556888887775 357788877653
No 72
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.05 E-value=0.0066 Score=60.80 Aligned_cols=60 Identities=12% Similarity=0.056 Sum_probs=38.8
Q ss_pred eEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 321 MTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 321 ~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
....|+|+++++|+.+ + .+.+||..++ +|.....+.-....-......|||+.+++|+.+
T Consensus 156 ~~~~p~~~~l~s~s~d-~------------~i~~w~~~~~---~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 156 VVWHPSQELLASASYD-D------------TVKLYREEED---DWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp EEECSSSSCEEEEETT-S------------CEEEEEEETT---EEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCCEEEEEeCC-C------------cEEEEEecCC---CEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 3456899999998765 2 5689998888 776432221111111234457899999999864
No 73
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.05 E-value=0.11 Score=50.50 Aligned_cols=255 Identities=11% Similarity=0.146 Sum_probs=124.6
Q ss_pred eEEEEe-eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc--cccccccceecC--CCcEEEE
Q 009420 41 MHMQLL-NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ--SNVWCSSGAVRP--DGVLIQT 115 (535)
Q Consensus 41 ~~~~~~-~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~--dG~l~v~ 115 (535)
+..+.+ ++|+.++.|+.+ | .+.+||..+++.+.+... +...-.+.++.+ +|++++.
T Consensus 12 V~~~~~s~~g~~las~s~D----------~---------~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s 72 (297)
T 2pm7_B 12 IHDAVMDYYGKRMATCSSD----------K---------TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILAS 72 (297)
T ss_dssp EEEEEECTTSSEEEEEETT----------S---------CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred eEEEEECCCCCEEEEEeCC----------C---------EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEE
Confidence 333333 689988888754 1 478899876544333221 111111122223 4889999
Q ss_pred cCCCCCCCeEEEEcCCCCCCCCceecCCCCcc-cccceEEEecC--CcEEEEcCccCCeeEEE-eCCCCCCeeeeccccc
Q 009420 116 GGFNDGEKKIRSFVPCNDESCDWKEIDGLGAR-RWYATDHILPD--GRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQ 191 (535)
Q Consensus 116 GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~-R~y~s~~~L~d--G~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~ 191 (535)
|+.+ ..+++||.. +.+|..+..+... ..-.+++..++ |+++++|+.++ .+.+| .... ..+... .+..
T Consensus 73 ~s~D---~~v~iWd~~---~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-~v~~wd~~~~-~~~~~~-~~~~ 143 (297)
T 2pm7_B 73 CSYD---GKVMIWKEE---NGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG-KVSVVEFKEN-GTTSPI-IIDA 143 (297)
T ss_dssp EETT---TEEEEEEBS---SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS-EEEEEEBCSS-SCBCCE-EEEC
T ss_pred EcCC---CEEEEEEcC---CCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC-cEEEEEecCC-Cceeee-eeec
Confidence 9874 689999998 6666554322211 11123334444 78888887764 45666 3321 111100 0000
Q ss_pred cCCccccCCCcceEEEee-------------CCcEEEEec--CeEEEEECCCCe--EEEecCCCCCCCCCCCCCCCceEe
Q 009420 192 TNDPRVENNLYPFVFLNV-------------DGFLFIFAN--NRAILFDYVNNK--VVKQYPAIPGGDPRSYPSSGSAVL 254 (535)
Q Consensus 192 ~~~~~~~~~~yp~~~~~~-------------dG~ifv~gg--~~~~~yDp~t~~--W~~~~p~~p~~~~R~~~~~g~~v~ 254 (535)
... ..+ .....| ++++++.|+ ..+.+||..+.+ +. ....+... ...- -....
T Consensus 144 h~~-----~v~-~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~-~~~~l~~H--~~~V--~~v~~ 212 (297)
T 2pm7_B 144 HAI-----GVN-SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV-LESTLEGH--SDWV--RDVAW 212 (297)
T ss_dssp CSS-----CEE-EEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEE-EEEEECCC--SSCE--EEEEE
T ss_pred ccC-----ccc-eEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEE-EEEEecCC--CCce--EEEEE
Confidence 000 000 011122 356777775 457888876543 33 12222221 1100 01111
Q ss_pred ecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeecC---CCCceeceeEEccCCeEEE
Q 009420 255 LPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETM---PQPRVMGDMTLLPNGNVLL 331 (535)
Q Consensus 255 lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m---~~~R~~~~~v~lpdG~I~v 331 (535)
-| ....+++++.|+.+ .++..+|+......|....+ .....-.....-|||++++
T Consensus 213 sp------~~~~~~~las~s~D----------------~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~la 270 (297)
T 2pm7_B 213 SP------TVLLRSYMASVSQD----------------RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLA 270 (297)
T ss_dssp CC------CCSSSEEEEEEETT----------------SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEE
T ss_pred CC------CCCCceEEEEEECC----------------CcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEE
Confidence 11 00125788888765 23445666543344654311 1121112234568999999
Q ss_pred EcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCC
Q 009420 332 INGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPS 371 (535)
Q Consensus 332 vGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~ 371 (535)
.||.+ + .+.+|+...+ ..|..+..+
T Consensus 271 s~~~D-~------------~v~lw~~~~~--g~w~~~~~~ 295 (297)
T 2pm7_B 271 LSGGD-N------------KVTLWKENLE--GKWEPAGEV 295 (297)
T ss_dssp EEETT-S------------CEEEEEECTT--SCEEEC---
T ss_pred EEcCC-C------------cEEEEEECCC--CcEEecccc
Confidence 98865 2 4688987643 178876543
No 74
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.05 E-value=0.18 Score=51.73 Aligned_cols=243 Identities=14% Similarity=0.059 Sum_probs=118.2
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPD 158 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~d 158 (535)
.+.+||..+++-...-..+..... ++..++..+++|+.+ ..+.+||.. +.+-.. .+............ +
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~~v~--~~~~~~~~l~s~s~d---g~i~~wd~~---~~~~~~--~~~~~~~~v~~~~~-~ 248 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRD---ATLRVWDIE---TGQCLH--VLMGHVAAVRCVQY-D 248 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEE--EEEEETTEEEEEETT---SEEEEEESS---SCCEEE--EEECCSSCEEEEEE-C
T ss_pred eEEEEECCcCcEEEEECCCCCcEE--EEEecCCEEEEEeCC---CEEEEEECC---CCcEEE--EEcCCcccEEEEEE-C
Confidence 467888877754322111111111 122266777887763 578999987 433211 11111111223333 7
Q ss_pred CcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEEec
Q 009420 159 GRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVKQY 235 (535)
Q Consensus 159 G~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~ 235 (535)
|+.+++|+.++ .+.+| .... .. ...+.... -+...+..+|+.++.|+ ..+.+||..+.+-...+
T Consensus 249 ~~~l~~~~~dg-~i~iwd~~~~--~~--~~~~~~~~--------~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 315 (445)
T 2ovr_B 249 GRRVVSGAYDF-MVKVWDPETE--TC--LHTLQGHT--------NRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL 315 (445)
T ss_dssp SSCEEEEETTS-CEEEEEGGGT--EE--EEEECCCS--------SCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCC-EEEEEECCCC--cE--eEEecCCC--------CceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 88888888764 35555 3321 11 11111100 11233344888777775 46889999887654333
Q ss_pred CCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeecCCC-
Q 009420 236 PAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQ- 314 (535)
Q Consensus 236 p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~~- 314 (535)
... .. ....+. .+++.+++|+.+. .+..+|+.......+. ..+.
T Consensus 316 ---~~~--~~----~v~~~~---------~~~~~l~~~~~dg----------------~i~vwd~~~~~~~~~~-~~~~~ 360 (445)
T 2ovr_B 316 ---TGH--QS----LTSGME---------LKDNILVSGNADS----------------TVKIWDIKTGQCLQTL-QGPNK 360 (445)
T ss_dssp ---CCC--CS----CEEEEE---------EETTEEEEEETTS----------------CEEEEETTTCCEEEEE-CSTTS
T ss_pred ---cCC--cc----cEEEEE---------EeCCEEEEEeCCC----------------eEEEEECCCCcEEEEE-ccCCC
Confidence 211 11 111221 2566777777541 2345555421111111 1111
Q ss_pred CceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCcee-ecCCCC--CCcccccceeecCCCcEEE
Q 009420 315 PRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFD-LQNPST--IPRMYHSTAVLLRDGRVLV 391 (535)
Q Consensus 315 ~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~--~~R~yhs~a~LlpDG~V~v 391 (535)
.......+. .+++.+++|+.+ | .+.+||..+. +.. .+.... .....-......|||.+++
T Consensus 361 ~~~~v~~~~-~~~~~l~s~~~d-g------------~v~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la 423 (445)
T 2ovr_B 361 HQSAVTCLQ-FNKNFVITSSDD-G------------TVKLWDLKTG---EFIRNLVTLESGGSGGVVWRIRASNTKLVCA 423 (445)
T ss_dssp CSSCEEEEE-ECSSEEEEEETT-S------------EEEEEETTTC---CEEEEEEECTTGGGTCEEEEEEECSSEEEEE
T ss_pred CCCCEEEEE-ECCCEEEEEeCC-C------------eEEEEECCCC---ceeeeeeccccCCCCceEEEEEecCCEEEEE
Confidence 111122233 378888888765 2 5789998877 432 221110 0000011234568999999
Q ss_pred ecCCCC
Q 009420 392 GGSNPH 397 (535)
Q Consensus 392 ~GG~~~ 397 (535)
+|+...
T Consensus 424 ~~~~dg 429 (445)
T 2ovr_B 424 VGSRNG 429 (445)
T ss_dssp EECSSS
T ss_pred EcccCC
Confidence 998654
No 75
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.01 E-value=0.11 Score=53.27 Aligned_cols=147 Identities=10% Similarity=0.091 Sum_probs=79.8
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEE
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIR 126 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~ 126 (535)
.+++.++.|+.+ | .+.+||..+.+-...-..+.... .++..+++++++|+.+ ..+.
T Consensus 141 ~d~~~l~~g~~d----------g---------~i~iwd~~~~~~~~~~~~h~~~v--~~l~~~~~~l~sg~~d---g~i~ 196 (435)
T 1p22_A 141 YDDQKIVSGLRD----------N---------TIKIWDKNTLECKRILTGHTGSV--LCLQYDERVIITGSSD---STVR 196 (435)
T ss_dssp CCSSEEEEEESS----------S---------CEEEEESSSCCEEEEECCCSSCE--EEEECCSSEEEEEETT---SCEE
T ss_pred ECCCEEEEEeCC----------C---------eEEEEeCCCCeEEEEEcCCCCcE--EEEEECCCEEEEEcCC---CeEE
Confidence 488888888754 2 47899998876543322222111 1122389999999874 5789
Q ss_pred EEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceE
Q 009420 127 SFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFV 205 (535)
Q Consensus 127 ~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~ 205 (535)
+||.. +.+-. ..+......-..... ++..++.|+.++ .+.+| .... ........+.... .+..
T Consensus 197 vwd~~---~~~~~--~~~~~h~~~v~~l~~-~~~~l~s~s~dg-~i~vwd~~~~-~~~~~~~~~~~~~--------~~v~ 260 (435)
T 1p22_A 197 VWDVN---TGEML--NTLIHHCEAVLHLRF-NNGMMVTCSKDR-SIAVWDMASP-TDITLRRVLVGHR--------AAVN 260 (435)
T ss_dssp EEESS---SCCEE--EEECCCCSCEEEEEC-CTTEEEEEETTS-CEEEEECSSS-SCCEEEEEECCCS--------SCEE
T ss_pred EEECC---CCcEE--EEEcCCCCcEEEEEE-cCCEEEEeeCCC-cEEEEeCCCC-CCceeeeEecCCC--------CcEE
Confidence 99987 44322 122211211223333 567778887664 45666 3221 1111111111110 1223
Q ss_pred EEeeCCcEEEEec--CeEEEEECCCCeEEE
Q 009420 206 FLNVDGFLFIFAN--NRAILFDYVNNKVVK 233 (535)
Q Consensus 206 ~~~~dG~ifv~gg--~~~~~yDp~t~~W~~ 233 (535)
.+..+|+.++.|+ ..+.+||..+.+-..
T Consensus 261 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 290 (435)
T 1p22_A 261 VVDFDDKYIVSASGDRTIKVWNTSTCEFVR 290 (435)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEeCCCEEEEEeCCCeEEEEECCcCcEEE
Confidence 3444888777775 467899998876553
No 76
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.99 E-value=0.046 Score=58.79 Aligned_cols=311 Identities=11% Similarity=0.033 Sum_probs=152.3
Q ss_pred CceEEcccCC--CcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEEC-cccccccccc
Q 009420 27 GGWQLLQKSI--GISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPL-FVQSNVWCSS 103 (535)
Q Consensus 27 g~W~~l~~~~--~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~-~~~~~~~c~~ 103 (535)
+.|+.+.+.. +...+|+ .-+++++|+.+..+ ..+.+||..+++.... ..... .++
T Consensus 126 ~s~~~~~~~~~~~~~~~~~-~~p~~~~~vs~~~d-------------------~~V~v~D~~t~~~~~~i~~g~~--~~~ 183 (543)
T 1nir_A 126 ESWKVLVKPEDRPKKQLND-LDLPNLFSVTLRDA-------------------GQIALVDGDSKKIVKVIDTGYA--VHI 183 (543)
T ss_dssp HHCEESSCGGGSCSSCCSC-CCGGGEEEEEEGGG-------------------TEEEEEETTTCCEEEEEECSTT--EEE
T ss_pred hhhccccccccCCcccccc-cCCCCEEEEEEcCC-------------------CeEEEEECCCceEEEEEecCcc--cce
Confidence 5566654321 2234454 33688999887532 2578999999876432 21222 334
Q ss_pred ceecCCCcEEEEcCCCCCCCeEEEEcC--CCCCCCCceecCCCCcccccceEEEec----CCcEEEEcCccCCeeEEE-e
Q 009420 104 GAVRPDGVLIQTGGFNDGEKKIRSFVP--CNDESCDWKEIDGLGARRWYATDHILP----DGRIIIIGGRRQFNYEFY-P 176 (535)
Q Consensus 104 ~~~l~dG~l~v~GG~~~g~~~v~~ydp--~~~~~~~W~~~~~m~~~R~y~s~~~L~----dG~vyvvGG~~~~~~E~y-P 176 (535)
.++-+||+.+.+++.. ..+.+||. . +. +.+..+....+-.+++.-+ ||+.++++.....++.+| .
T Consensus 184 v~~spdg~~l~v~~~d---~~V~v~D~~~~---t~--~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~ 255 (543)
T 1nir_A 184 SRMSASGRYLLVIGRD---ARIDMIDLWAK---EP--TKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG 255 (543)
T ss_dssp EEECTTSCEEEEEETT---SEEEEEETTSS---SC--EEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEET
T ss_pred EEECCCCCEEEEECCC---CeEEEEECcCC---CC--cEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEec
Confidence 5577899877776653 78999998 4 33 2333333333333455556 898887777655566666 3
Q ss_pred CCCCCCee-eeccccccCCcccc-CCCcce-EEEeeCCcEEEEec---CeEEEEECCCCeEEEecCCCCCCCCCCCCCCC
Q 009420 177 KNGAPNVY-SLPFLVQTNDPRVE-NNLYPF-VFLNVDGFLFIFAN---NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSG 250 (535)
Q Consensus 177 ~~~~~~w~-~~~~l~~~~~~~~~-~~~yp~-~~~~~dG~ifv~gg---~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g 250 (535)
.+. +.. .++......+.... ..-.+. ....++++.|++.. ..+.++|..+.+-.. ...++.. + ++ .
T Consensus 256 ~t~--~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i~~~--~-~~--~ 327 (543)
T 1nir_A 256 ETL--EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-VTSIGAA--P-FL--H 327 (543)
T ss_dssp TTC--CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-EEEEECC--S-SC--C
T ss_pred ccc--ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce-eEEeccC--c-Cc--c
Confidence 321 111 11110000000000 000122 34456666555543 467888887643111 0011211 1 12 1
Q ss_pred ceEeecccccCCCCCCcE-EEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeee--e--cCCCCceeceeEEcc
Q 009420 251 SAVLLPLKNLLAPSVAAE-VLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVL--E--TMPQPRVMGDMTLLP 325 (535)
Q Consensus 251 ~~v~lpl~~~~~~~~~gk-Iyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~--~--~m~~~R~~~~~v~lp 325 (535)
...+-| +++ +|+.+.. .+++..+|+.+ .+-.. . .+|.+-.... ..-|
T Consensus 328 ~~~~sp---------dg~~l~va~~~----------------~~~v~v~D~~t--g~l~~~i~~g~~ph~g~g~~-~~~p 379 (543)
T 1nir_A 328 DGGWDS---------SHRYFMTAANN----------------SNKVAVIDSKD--RRLSALVDVGKTPHPGRGAN-FVHP 379 (543)
T ss_dssp CEEECT---------TSCEEEEEEGG----------------GTEEEEEETTT--TEEEEEEECSSSBCCTTCEE-EEET
T ss_pred CceECC---------CCCEEEEEecC----------------CCeEEEEECCC--CeEEEeeccCCCCCCCCCcc-cCCC
Confidence 122222 555 4444321 23445566553 22111 1 3444322222 2346
Q ss_pred C-CeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCC--CCceeecCCCCCCcccccceeecCCCcEEEecCCCCccccc
Q 009420 326 N-GNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIP--GSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNF 402 (535)
Q Consensus 326 d-G~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~--g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~~~~~~~ 402 (535)
+ |++|+.+....+ ++.+||..+.. ...|+.+..++..-..--.....|||+.+.++...+....
T Consensus 380 ~~g~~~~s~~~~d~------------~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~- 446 (543)
T 1nir_A 380 KYGPVWSTSHLGDG------------SISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDAR- 446 (543)
T ss_dssp TTEEEEEEEBSSSS------------EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHH-
T ss_pred CCccEEEeccCCCc------------eEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcc-
Confidence 6 899988753211 56788876631 1137665444332211012335789988777763222100
Q ss_pred cCCCCCceeeEEEEcCCCCC
Q 009420 403 TGVLFPTELSLEAFSPYYLD 422 (535)
Q Consensus 403 ~~~~~~~~~~vE~y~Ppyl~ 422 (535)
...+|.+|+-..+.
T Consensus 447 ------~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 447 ------ISQSVAVFDLKNLD 460 (543)
T ss_dssp ------HHTCEEEEETTCTT
T ss_pred ------cCceEEEEECCCCC
Confidence 02368888877664
No 77
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.99 E-value=0.15 Score=55.29 Aligned_cols=137 Identities=15% Similarity=0.084 Sum_probs=71.6
Q ss_pred eeEEEECCCCCEEECc-c------ccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccc
Q 009420 79 HSVEYSVLTNEFRPLF-V------QSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYA 151 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~-~------~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~ 151 (535)
.+.+||..+++....- . .+.....+.++.+||+.++.|+.+ +.+++||.. +.+....-.+...-...
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---~~v~lWd~~---~~~~~~~~~~~~~~~~~ 286 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---KTIKIWNVA---TLKVEKTIPVGTRIEDQ 286 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TTEEEEEEECCSSGGGC
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC---CeEEEEeCC---CCceeeeecCCCCccce
Confidence 4788998887654321 1 122223344566899999999874 689999987 54433211111000011
Q ss_pred eEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCC
Q 009420 152 TDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVN 228 (535)
Q Consensus 152 s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t 228 (535)
......+++.++.++.++ .+.+| +... .. ...+....+ .--.+...|||+.++.|+ ..+.+||..+
T Consensus 287 ~~~~~~~~~~l~s~s~d~-~i~~~~~~~~--~~--~~~~~gh~~------~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 287 QLGIIWTKQALVSISANG-FINFVNPELG--SI--DQVRYGHNK------AITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp EEEEEECSSCEEEEETTC-CEEEEETTTT--EE--EEEECCCSS------CEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eEEEEEcCCEEEEEeCCC-cEEEEeCCCC--Cc--ceEEcCCCC------CEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 112222677777776654 35555 3321 11 111111100 011233457888888775 4578888877
Q ss_pred CeEE
Q 009420 229 NKVV 232 (535)
Q Consensus 229 ~~W~ 232 (535)
.+..
T Consensus 356 ~~~~ 359 (611)
T 1nr0_A 356 GISN 359 (611)
T ss_dssp CCEE
T ss_pred Ccee
Confidence 6543
No 78
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.98 E-value=0.2 Score=53.00 Aligned_cols=243 Identities=13% Similarity=0.134 Sum_probs=121.4
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPD 158 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~d 158 (535)
.+.+||........+.. +.....+.++.+||+.++.|+.+ ..+++||.. ...-..+..... .-.+++..+|
T Consensus 285 ~i~~w~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~t~~~d---~~i~~w~~~---~~~~~~~~~~~~--~v~~~~~s~~ 355 (577)
T 2ymu_A 285 TVKLWNRNGQLLQTLTG-HSSSVWGVAFSPDGQTIASASDD---KTVKLWNRN---GQHLQTLTGHSS--SVWGVAFSPD 355 (577)
T ss_dssp CEEEEETTSCEEEEECC-CSSCEEEEEECTTSSEEEEEETT---SCEEEEETT---SCEEEEECCCSS--CEEEEEECTT
T ss_pred EEEEEeCCCcEEEEEec-CCCCeEEEEECCCCCEEEEEeCC---CeEEEEeCC---CCeeEEEeCCCC--CEEEEEECCC
Confidence 36678865544443332 11112233466799999988763 568889875 332222221111 1124556678
Q ss_pred CcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEEecC
Q 009420 159 GRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVKQYP 236 (535)
Q Consensus 159 G~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~p 236 (535)
|+.++.|+.++ .+.+|.... +- +..+..... .--.+...+||+.++.|+ +.+.+||....... .+
T Consensus 356 g~~l~~~~~dg-~v~~~~~~~--~~--~~~~~~~~~------~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~-~~- 422 (577)
T 2ymu_A 356 GQTIASASDDK-TVKLWNRNG--QL--LQTLTGHSS------SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ-TL- 422 (577)
T ss_dssp SSEEEEEETTS-EEEEEETTC--CE--EEEEECCSS------CEEEEEECTTSSCEEEEETTSEEEEECTTCCEEE-EE-
T ss_pred CCEEEEEeCCC-EEEEEcCCC--CE--EEEecCCCC------CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEE-Ee-
Confidence 99999887654 456664321 11 111111000 001234467898888775 35778886544322 22
Q ss_pred CCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeecCCCCc
Q 009420 237 AIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPR 316 (535)
Q Consensus 237 ~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~~~R 316 (535)
... . +...-+... .+++.+++|+.+. .+..+|... ..-....-....
T Consensus 423 --~~~--~-----~~v~~~~~s------~d~~~l~~~~~d~----------------~v~~w~~~~--~~~~~~~~~~~~ 469 (577)
T 2ymu_A 423 --TGH--S-----SSVWGVAFS------PDDQTIASASDDK----------------TVKLWNRNG--QLLQTLTGHSSS 469 (577)
T ss_dssp --ECC--S-----SCEEEEEEC------TTSSEEEEEETTS----------------EEEEEETTS--CEEEEEECCSSC
T ss_pred --cCC--C-----CCeEEEEEC------CCCCEEEEEcCCC----------------EEEEEECCC--CEEEEEcCCCCC
Confidence 111 1 111111111 2677788877541 233344321 111111112222
Q ss_pred eeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 317 VMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 317 ~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
. .++..-|||+++++++.+ + .+.+||.... .-..+..- .... ....+.|||+.+++|+..
T Consensus 470 v-~~~~~spd~~~las~~~d-~------------~i~iw~~~~~---~~~~~~~h-~~~v--~~l~~s~dg~~l~s~~~d 529 (577)
T 2ymu_A 470 V-RGVAFSPDGQTIASASDD-K------------TVKLWNRNGQ---LLQTLTGH-SSSV--RGVAFSPDGQTIASASDD 529 (577)
T ss_dssp E-EEEEECTTSCEEEEEETT-S------------EEEEEETTSC---EEEEEECC-SSCE--EEEEECTTSSCEEEEETT
T ss_pred E-EEEEEcCCCCEEEEEeCC-C------------EEEEEcCCCC---EEEEEeCC-CCCE--EEEEEcCCCCEEEEEECc
Confidence 2 234567899999998755 2 5688996443 33332211 1111 123457999999998853
No 79
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.95 E-value=0.23 Score=51.03 Aligned_cols=246 Identities=13% Similarity=0.163 Sum_probs=118.8
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCccc-ccceEEEe-
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARR-WYATDHIL- 156 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R-~y~s~~~L- 156 (535)
.+.+||..+++-...-..+.....+....+++ ++++|+.+ ..+.+||.. +.+-. ..+.... .-.+....
T Consensus 143 ~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~d---g~i~vwd~~---~~~~~--~~~~~h~~~v~~l~~~~ 213 (464)
T 3v7d_B 143 MIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTD---RTVRVWDIK---KGCCT--HVFEGHNSTVRCLDIVE 213 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETT---SCEEEEETT---TTEEE--EEECCCSSCEEEEEEEE
T ss_pred cEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCC---CCEEEEECC---CCcEE--EEECCCCCccEEEEEec
Confidence 47899998876433222222222223344456 77777763 578999987 44321 1111111 11122222
Q ss_pred -cCCcEEEEcCccCCeeEEE-eCCCCCCee---------ee------ccccccCCccccCCCcceEEEeeCCcEEEEec-
Q 009420 157 -PDGRIIIIGGRRQFNYEFY-PKNGAPNVY---------SL------PFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN- 218 (535)
Q Consensus 157 -~dG~vyvvGG~~~~~~E~y-P~~~~~~w~---------~~------~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg- 218 (535)
.+++.++.|+.++ .+.+| ......... .. +.+.... ....-+...+.+++++++.|+
T Consensus 214 ~~~~~~l~s~s~d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~l~~~~~ 288 (464)
T 3v7d_B 214 YKNIKYIVTGSRDN-TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL----RGHMASVRTVSGHGNIVVSGSY 288 (464)
T ss_dssp SSSCEEEEEEETTS-CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE----CCCSSCEEEEEEETTEEEEEET
T ss_pred CCCCCEEEEEcCCC-cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc----cCccceEEEEcCCCCEEEEEeC
Confidence 4778888887764 34555 221100000 00 0000000 001112334567888888775
Q ss_pred -CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEE
Q 009420 219 -NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCAR 297 (535)
Q Consensus 219 -~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~ 297 (535)
..+.+||..+.+-...+ ....... -...+. .+++.+++|+.+. .+..
T Consensus 289 d~~i~vwd~~~~~~~~~~---~~~~~~v----~~~~~~---------~~~~~l~sg~~dg----------------~i~v 336 (464)
T 3v7d_B 289 DNTLIVWDVAQMKCLYIL---SGHTDRI----YSTIYD---------HERKRCISASMDT----------------TIRI 336 (464)
T ss_dssp TSCEEEEETTTTEEEEEE---CCCSSCE----EEEEEE---------TTTTEEEEEETTS----------------CEEE
T ss_pred CCeEEEEECCCCcEEEEe---cCCCCCE----EEEEEc---------CCCCEEEEEeCCC----------------cEEE
Confidence 46889999888755333 2110111 011221 2667788887642 2445
Q ss_pred EEecCCCCCeeee-cCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcc
Q 009420 298 IKITDPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRM 376 (535)
Q Consensus 298 ~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~ 376 (535)
+|+.. .+.. .+.........+.+ +++.++.|+.+ | .+.+||..+.. ..++.-. ...
T Consensus 337 wd~~~----~~~~~~~~~h~~~v~~~~~-~~~~l~s~s~d-g------------~v~vwd~~~~~-~~~~~~~----~~~ 393 (464)
T 3v7d_B 337 WDLEN----GELMYTLQGHTALVGLLRL-SDKFLVSAAAD-G------------SIRGWDANDYS-RKFSYHH----TNL 393 (464)
T ss_dssp EETTT----TEEEEEECCCSSCEEEEEE-CSSEEEEEETT-S------------EEEEEETTTCC-EEEEEEC----TTC
T ss_pred EECCC----CcEEEEEeCCCCcEEEEEE-cCCEEEEEeCC-C------------cEEEEECCCCc-eeeeecC----CCC
Confidence 55542 1111 22111122223343 67888888765 2 57899998761 1222111 111
Q ss_pred cccceeecCCCcEEEecC
Q 009420 377 YHSTAVLLRDGRVLVGGS 394 (535)
Q Consensus 377 yhs~a~LlpDG~V~v~GG 394 (535)
.....+.+|++++++|+
T Consensus 394 -~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 394 -SAITTFYVSDNILVSGS 410 (464)
T ss_dssp -CCEEEEEECSSEEEEEE
T ss_pred -ccEEEEEeCCCEEEEec
Confidence 12345678999999987
No 80
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.94 E-value=0.091 Score=52.60 Aligned_cols=134 Identities=14% Similarity=0.118 Sum_probs=72.4
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPD 158 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~d 158 (535)
.+.+||..+++....-.... ...+.++.+||+.++++|..+ ..+.+||.. +++.... +.....-.+.+..+|
T Consensus 55 ~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~--~~v~v~d~~---~~~~~~~--~~~~~~~~~~~~s~d 126 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMAS--STLSVIDTT---SNTVAGT--VKTGKSPLGLALSPD 126 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTT--TEEEEEETT---TTEEEEE--EECSSSEEEEEECTT
T ss_pred eEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCC--CEEEEEECC---CCeEEEE--EeCCCCcceEEECCC
Confidence 57899999887654332222 223344667888555544322 579999998 5543221 222222235556668
Q ss_pred Cc-EEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcce-EEEeeCCc-EEEEec--CeEEEEECCCCeEE
Q 009420 159 GR-IIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPF-VFLNVDGF-LFIFAN--NRAILFDYVNNKVV 232 (535)
Q Consensus 159 G~-vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~-~~~~~dG~-ifv~gg--~~~~~yDp~t~~W~ 232 (535)
|+ +|+.++.+ ..+.+| ..+. +.. ..+.. ...+. ....++|+ ||+.+. ..+.+||..+++..
T Consensus 127 g~~l~~~~~~~-~~v~~~d~~~~--~~~--~~~~~--------~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 127 GKKLYVTNNGD-KTVSVINTVTK--AVI--NTVSV--------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI 193 (391)
T ss_dssp SSEEEEEETTT-TEEEEEETTTT--EEE--EEEEC--------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCEEEEEeCCC-CEEEEEECCCC--cEE--EEEec--------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE
Confidence 87 44665543 456666 3321 211 11100 01122 34456886 556554 46889999998765
Q ss_pred E
Q 009420 233 K 233 (535)
Q Consensus 233 ~ 233 (535)
.
T Consensus 194 ~ 194 (391)
T 1l0q_A 194 D 194 (391)
T ss_dssp E
T ss_pred E
Confidence 4
No 81
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.93 E-value=0.26 Score=48.14 Aligned_cols=98 Identities=12% Similarity=0.082 Sum_probs=55.8
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCC-CCCCe
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFN-DGEKK 124 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~-~g~~~ 124 (535)
-++|++|+.+..+ ..+.+||+.+++++.+.........+.+..+||++|+..... .....
T Consensus 53 ~~~g~l~~~~~~~-------------------~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 53 DRQGQLFLLDVFE-------------------GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp CTTSCEEEEETTT-------------------CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCE
T ss_pred CCCCCEEEEECCC-------------------CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCce
Confidence 3689988877532 147889999998876542222222334455799999876432 11247
Q ss_pred EEEEcCCCCCCCCcee-cCCCCcccccceEEEecCCcEEEEc
Q 009420 125 IRSFVPCNDESCDWKE-IDGLGARRWYATDHILPDGRIIIIG 165 (535)
Q Consensus 125 v~~ydp~~~~~~~W~~-~~~m~~~R~y~s~~~L~dG~vyvvG 165 (535)
+.+||+. +.+... +........-...+.-+||++|+..
T Consensus 114 i~~~d~~---~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 152 (333)
T 2dg1_A 114 IFAATEN---GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTD 152 (333)
T ss_dssp EEEECTT---SCSCEEEECSSSSCCCEEEEEECTTSCEEEEE
T ss_pred EEEEeCC---CCEEEEEEccCccCCcccceEECCCCCEEEEe
Confidence 8999987 554431 2211111222234455567777643
No 82
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.93 E-value=0.095 Score=61.54 Aligned_cols=263 Identities=12% Similarity=0.037 Sum_probs=135.1
Q ss_pred EEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCC
Q 009420 44 QLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEK 123 (535)
Q Consensus 44 ~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~ 123 (535)
+.-++++.++.|+.+ | .+.+||..+++.......+.....+.++.+||+.+++|+.+ .
T Consensus 968 ~~sp~g~~l~~g~~~----------g---------~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d---g 1025 (1249)
T 3sfz_A 968 CLSPHLEYVAFGDED----------G---------AIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED---S 1025 (1249)
T ss_dssp EECTTSSEEEEEETT----------S---------CCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS---S
T ss_pred EEcCCCCEEEEEcCC----------C---------CEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC---C
Confidence 334688877777643 2 36789988876544332333333344566899999998864 5
Q ss_pred eEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcc
Q 009420 124 KIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYP 203 (535)
Q Consensus 124 ~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp 203 (535)
.+.+||.. +.+..... .....-.+.+..+++++ ++|+.+ ..+.+|.......-..+. ... ..--
T Consensus 1026 ~i~vwd~~---~~~~~~~~--~~~~~v~~~~~~~~~~l-~~~~~d-g~v~vwd~~~~~~~~~~~---~~~------~~v~ 1089 (1249)
T 3sfz_A 1026 VIQVWNWQ---TGDYVFLQ--AHQETVKDFRLLQDSRL-LSWSFD-GTVKVWNVITGRIERDFT---CHQ------GTVL 1089 (1249)
T ss_dssp BEEEEETT---TTEEECCB--CCSSCEEEEEECSSSEE-EEEESS-SEEEEEETTTTCCCEEEE---CCS------SCCC
T ss_pred EEEEEECC---CCceEEEe--cCCCcEEEEEEcCCCcE-EEEECC-CcEEEEECCCCceeEEEc---ccC------CcEE
Confidence 79999987 55544322 12222234455555655 445544 356666322111111111 000 0011
Q ss_pred eEEEeeCCcEEEEecC--eEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCccc
Q 009420 204 FVFLNVDGFLFIFANN--RAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYE 281 (535)
Q Consensus 204 ~~~~~~dG~ifv~gg~--~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~ 281 (535)
.....+||+.++.|+. .+.+||..+.+- +..+... .+...-+... .+++++++|+.+.
T Consensus 1090 ~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~---~~~l~~h-------~~~v~~~~~s------~dg~~lat~~~dg---- 1149 (1249)
T 3sfz_A 1090 SCAISSDATKFSSTSADKTAKIWSFDLLSP---LHELKGH-------NGCVRCSAFS------LDGILLATGDDNG---- 1149 (1249)
T ss_dssp CEEECSSSSSCEEECCSSCCCEECSSSSSC---SBCCCCC-------SSCEEEEEEC------SSSSEEEEEETTS----
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCcce---eeeeccC-------CCcEEEEEEC------CCCCEEEEEeCCC----
Confidence 2455679988888764 577888876542 2212211 1111111112 2788889888652
Q ss_pred ccccccccccCCceEEEEecCCCCCeeeec-------CCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEE
Q 009420 282 QAEKGVFVAALNTCARIKITDPTPTWVLET-------MPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVV 354 (535)
Q Consensus 282 ~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~-------m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~ 354 (535)
.+..+|+.......+..+ ......-.+....|||+.++.+| | .+.+
T Consensus 1150 ------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~---g------------~v~v 1202 (1249)
T 3sfz_A 1150 ------------EIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG---G------------YLKW 1202 (1249)
T ss_dssp ------------CCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES---S------------SEEE
T ss_pred ------------EEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC---C------------eEEE
Confidence 123444432111111100 11111112335568999888876 2 3689
Q ss_pred EeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 355 YRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 355 YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
||..+. +-...-....... ....+.|||+.+++|+..
T Consensus 1203 wd~~~g---~~~~~~~~~~~~i--~~~~~s~dg~~l~~~~~d 1239 (1249)
T 3sfz_A 1203 WNVATG---DSSQTFYTNGTNL--KKIHVSPDFRTYVTVDNL 1239 (1249)
T ss_dssp BCSSSC---BCCCCCCCSSCCC--CCCEECSSSCCEEEECTT
T ss_pred EECCCC---ceeeeeeccCCcc--cEEEECCCCCEEEEecCC
Confidence 998776 3321111111111 234567999999988864
No 83
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.91 E-value=0.11 Score=52.16 Aligned_cols=102 Identities=15% Similarity=0.055 Sum_probs=55.6
Q ss_pred eeCCe-EEEEecCCCCCCCCCCCCCccccCCCCceeEEEEC----CCCC--EEE-----Ccc-c--------cccccccc
Q 009420 46 LNNDR-VVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSV----LTNE--FRP-----LFV-Q--------SNVWCSSG 104 (535)
Q Consensus 46 ~~~gk-v~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp----~t~~--w~~-----~~~-~--------~~~~c~~~ 104 (535)
-++|+ +++.|+.+ | .+.+||. .+++ |.. +.. . +.....+.
T Consensus 54 s~~~~~~l~~~~~d----------g---------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (425)
T 1r5m_A 54 NPLDESILAYGEKN----------S---------VARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCL 114 (425)
T ss_dssp CSSCTTEEEEEETB----------T---------EEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEE
T ss_pred CCCCCcEEEEecCC----------c---------eEEEEEEecccCCccccccccccccccccccccccccCCCCceEEE
Confidence 36888 88888743 2 4788888 7766 221 111 0 11123334
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE
Q 009420 105 AVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 105 ~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 175 (535)
++.+||+++++|+.+ ..+.+||.. ...-..+.. ....-.+++..++|+.+++|+.++ .+.+|
T Consensus 115 ~~s~~~~~l~~~~~d---g~i~i~~~~---~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~-~i~iw 176 (425)
T 1r5m_A 115 AWSHDGNSIVTGVEN---GELRLWNKT---GALLNVLNF--HRAPIVSVKWNKDGTHIISMDVEN-VTILW 176 (425)
T ss_dssp EECTTSSEEEEEETT---SCEEEEETT---SCEEEEECC--CCSCEEEEEECTTSSEEEEEETTC-CEEEE
T ss_pred EEcCCCCEEEEEeCC---CeEEEEeCC---CCeeeeccC--CCccEEEEEECCCCCEEEEEecCC-eEEEE
Confidence 566799999998864 468899844 222222221 111223455667888888887654 34455
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.91 E-value=0.087 Score=51.60 Aligned_cols=143 Identities=14% Similarity=0.149 Sum_probs=72.2
Q ss_pred eeEEEECCCCCEEECcc-ccccccccceecCC---CcEEEEcCCCCCCCeEEEEcCCCCCCCC--ceecCCCCc----cc
Q 009420 79 HSVEYSVLTNEFRPLFV-QSNVWCSSGAVRPD---GVLIQTGGFNDGEKKIRSFVPCNDESCD--WKEIDGLGA----RR 148 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~-~~~~~c~~~~~l~d---G~l~v~GG~~~g~~~v~~ydp~~~~~~~--W~~~~~m~~----~R 148 (535)
.+.+||..+++...... .+.....+..+.++ |.++++|+.+ ..+.+||.. +.+ -..+..-.. -.
T Consensus 45 ~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~---~~~~~~~~~~~~~~~v~~~~ 118 (357)
T 3i2n_A 45 VIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG---GNLHIWNLE---APEMPVYSVKGHKEIINAID 118 (357)
T ss_dssp EEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT---SCEEEECTT---SCSSCSEEECCCSSCEEEEE
T ss_pred EEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC---CeEEEEeCC---CCCccEEEEEecccceEEEe
Confidence 58899999988765532 22222223344556 6888888764 578999987 332 111111110 01
Q ss_pred ccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEE---EeeCCcEEEEec--CeEE
Q 009420 149 WYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVF---LNVDGFLFIFAN--NRAI 222 (535)
Q Consensus 149 ~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~---~~~dG~ifv~gg--~~~~ 222 (535)
|.+..+.-+|++.++.|+.++ .+.+| ..........+....... ....+...+ ..+++++++.|+ ..+.
T Consensus 119 ~~~~~~~s~~~~~l~~~~~d~-~i~vwd~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~ 193 (357)
T 3i2n_A 119 GIGGLGIGEGAPEIVTGSRDG-TVKVWDPRQKDDPVANMEPVQGEN----KRDCWTVAFGNAYNQEERVVCAGYDNGDIK 193 (357)
T ss_dssp EESGGGCC-CCCEEEEEETTS-CEEEECTTSCSSCSEEECCCTTSC----CCCEEEEEEECCCC-CCCEEEEEETTSEEE
T ss_pred eccccccCCCccEEEEEeCCC-eEEEEeCCCCCCcceeccccCCCC----CCceEEEEEEeccCCCCCEEEEEccCCeEE
Confidence 111111235788888888764 45666 332110111111100000 001111111 227899888886 4688
Q ss_pred EEECCCCeEE
Q 009420 223 LFDYVNNKVV 232 (535)
Q Consensus 223 ~yDp~t~~W~ 232 (535)
+||.++.+-.
T Consensus 194 i~d~~~~~~~ 203 (357)
T 3i2n_A 194 LFDLRNMALR 203 (357)
T ss_dssp EEETTTTEEE
T ss_pred EEECccCcee
Confidence 9999987744
No 85
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.84 E-value=0.19 Score=49.18 Aligned_cols=108 Identities=12% Similarity=0.026 Sum_probs=62.7
Q ss_pred eeEEEEe-eC---CeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECc--cccccccccceecCCCcEE
Q 009420 40 SMHMQLL-NN---DRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLF--VQSNVWCSSGAVRPDGVLI 113 (535)
Q Consensus 40 ~~~~~~~-~~---gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~--~~~~~~c~~~~~l~dG~l~ 113 (535)
.+.++.. ++ |+.++.|+.+ | .+.+||..++...... ..+.....+..+.++|+.+
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~d----------g---------~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWA----------N---------DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKV 101 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETT----------S---------EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred ceEEEEEcCCCCCceEEEEECCC----------C---------cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEE
Confidence 3344443 56 5888888754 2 4789998874333211 1222223334566799999
Q ss_pred EEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEE--ecCCcEEEEcCccCCeeEEE
Q 009420 114 QTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHI--LPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 114 v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~--L~dG~vyvvGG~~~~~~E~y 175 (535)
++|+.+ ..+.+||.. +.+...... ....-.+++. -++++.+++|+.++ .+.+|
T Consensus 102 ~s~~~d---g~v~iwd~~---~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg-~i~vw 156 (368)
T 3mmy_A 102 FTASCD---KTAKMWDLS---SNQAIQIAQ--HDAPVKTIHWIKAPNYSCVMTGSWDK-TLKFW 156 (368)
T ss_dssp EEEETT---SEEEEEETT---TTEEEEEEE--CSSCEEEEEEEECSSCEEEEEEETTS-EEEEE
T ss_pred EEEcCC---CcEEEEEcC---CCCceeecc--ccCceEEEEEEeCCCCCEEEEccCCC-cEEEE
Confidence 998763 579999987 554333211 1111122333 46888888888764 45666
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.82 E-value=0.45 Score=48.84 Aligned_cols=215 Identities=12% Similarity=0.094 Sum_probs=107.5
Q ss_pred eeEEEECCCCCEEECccccc--cccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecC--C-----------
Q 009420 79 HSVEYSVLTNEFRPLFVQSN--VWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEID--G----------- 143 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~--~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~--~----------- 143 (535)
.+.+||..+++-...-..+. ..|-.-....++.++++|+.+ ..+.+||.. +.+-.... .
T Consensus 184 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d---~~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~ 257 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD---NTLHVWKLP---KESSVPDHGEEHDYPLVFHTPE 257 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT---SCEEEEECC---CCCCC------CCSSEEESCGG
T ss_pred CEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC---CcEEEeeCC---CCcccccccccCCcceEeeccC
Confidence 47789998876433222121 122211122578889998864 568888876 32211000 0
Q ss_pred -----C--CcccccceEEEecCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEE
Q 009420 144 -----L--GARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIF 216 (535)
Q Consensus 144 -----m--~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~ 216 (535)
+ .........+.-.+++.+++|+.++ .+.+|..... +.. ..+..... .--.....++|+.++.
T Consensus 258 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~-~i~vwd~~~~-~~~--~~~~~~~~------~v~~~~~~~~~~~l~s 327 (464)
T 3v7d_B 258 ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN-TLIVWDVAQM-KCL--YILSGHTD------RIYSTIYDHERKRCIS 327 (464)
T ss_dssp GCTTEEEEECCCSSCEEEEEEETTEEEEEETTS-CEEEEETTTT-EEE--EEECCCSS------CEEEEEEETTTTEEEE
T ss_pred CCeEEEEEccCccceEEEEcCCCCEEEEEeCCC-eEEEEECCCC-cEE--EEecCCCC------CEEEEEEcCCCCEEEE
Confidence 0 0011111223344788888888765 4566622210 111 11111100 0112345568888887
Q ss_pred ec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCc
Q 009420 217 AN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNT 294 (535)
Q Consensus 217 gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s 294 (535)
|+ ..+.+||..+.+-...+ ... .. ....+ . .+++.+++|+.+. .
T Consensus 328 g~~dg~i~vwd~~~~~~~~~~---~~h--~~----~v~~~-~--------~~~~~l~s~s~dg----------------~ 373 (464)
T 3v7d_B 328 ASMDTTIRIWDLENGELMYTL---QGH--TA----LVGLL-R--------LSDKFLVSAAADG----------------S 373 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEE---CCC--SS----CEEEE-E--------ECSSEEEEEETTS----------------E
T ss_pred EeCCCcEEEEECCCCcEEEEE---eCC--CC----cEEEE-E--------EcCCEEEEEeCCC----------------c
Confidence 75 45889999888755333 211 11 11111 1 2567778877651 2
Q ss_pred eEEEEecCCCCCeeeecCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCC
Q 009420 295 CARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNI 360 (535)
Q Consensus 295 ~e~~d~~~~~~~W~~~~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~ 360 (535)
+..+|+......+... ..........-++|+++++|+ + + .+.+||.++.
T Consensus 374 v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-d-g------------~i~iwd~~~g 422 (464)
T 3v7d_B 374 IRGWDANDYSRKFSYH---HTNLSAITTFYVSDNILVSGS-E-N------------QFNIYNLRSG 422 (464)
T ss_dssp EEEEETTTCCEEEEEE---CTTCCCEEEEEECSSEEEEEE-T-T------------EEEEEETTTC
T ss_pred EEEEECCCCceeeeec---CCCCccEEEEEeCCCEEEEec-C-C------------eEEEEECCCC
Confidence 4455654321112211 111122234567999998876 3 2 5789999887
No 87
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.82 E-value=0.15 Score=59.97 Aligned_cols=270 Identities=9% Similarity=0.014 Sum_probs=135.2
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeE
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKI 125 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v 125 (535)
-++|+.++.|+.+ | .+.+||..+++-...-..+.....+.++.+||+++++|+.+ ..+
T Consensus 624 s~~~~~l~s~~~d----------~---------~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---~~v 681 (1249)
T 3sfz_A 624 SQDGQRIASCGAD----------K---------TLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSAD---KKV 681 (1249)
T ss_dssp CTTSSEEEEEETT----------S---------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEE
T ss_pred CCCCCEEEEEeCC----------C---------eEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCC---CeE
Confidence 3688888888743 2 47899999887533222233333344567899999999863 579
Q ss_pred EEEcCCCCCCCCceecCCCCc-ccccceEEEec--CCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCC
Q 009420 126 RSFVPCNDESCDWKEIDGLGA-RRWYATDHILP--DGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNL 201 (535)
Q Consensus 126 ~~ydp~~~~~~~W~~~~~m~~-~R~y~s~~~L~--dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~ 201 (535)
.+||.. +.+... .+.. ...-.+++..+ ++.+++.|+.++ .+.+| ..+. ... ..+....+ .
T Consensus 682 ~vwd~~---~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~-~v~vwd~~~~--~~~--~~~~~h~~------~ 745 (1249)
T 3sfz_A 682 KIWDSA---TGKLVH--TYDEHSEQVNCCHFTNKSNHLLLATGSNDF-FLKLWDLNQK--ECR--NTMFGHTN------S 745 (1249)
T ss_dssp EEEETT---TCCEEE--EEECCSSCEEEEEECSSSSCCEEEEEETTS-CEEEEETTSS--SEE--EEECCCSS------C
T ss_pred EEEECC---CCceEE--EEcCCCCcEEEEEEecCCCceEEEEEeCCC-eEEEEECCCc--chh--heecCCCC------C
Confidence 999987 443221 1111 11122333334 445666666553 45666 3321 111 01111100 0
Q ss_pred cceEEEeeCCcEEEEecC--eEEEEECCCCeEEEecCCCCCCC-CCCCC--CCCceEeecccccCCCCCCcEEEEEcCCC
Q 009420 202 YPFVFLNVDGFLFIFANN--RAILFDYVNNKVVKQYPAIPGGD-PRSYP--SSGSAVLLPLKNLLAPSVAAEVLVCGGAP 276 (535)
Q Consensus 202 yp~~~~~~dG~ifv~gg~--~~~~yDp~t~~W~~~~p~~p~~~-~R~~~--~~g~~v~lpl~~~~~~~~~gkIyv~GG~~ 276 (535)
--.....++|+.++.|+. .+.+||..+.+-...+....... ....+ .......+... .+++.+++++..
T Consensus 746 v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s------~dg~~l~~~~~~ 819 (1249)
T 3sfz_A 746 VNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS------ADGDKIIVAAKN 819 (1249)
T ss_dssp EEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC------TTSSEEEEEETT
T ss_pred EEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC------CCCCEEEEEcCC
Confidence 112345679988888763 67889988776443221000000 00000 00000001111 256666665522
Q ss_pred CCcccccccccccccCCceEEEEecCCCCCeeee-c-CCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEE
Q 009420 277 KGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-T-MPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVV 354 (535)
Q Consensus 277 ~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~-m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~ 354 (535)
.+..+|+.. ...... . -..... ......|+|+++++|+.+ + .+.+
T Consensus 820 -----------------~v~~~d~~~--~~~~~~~~~~~~~~v-~~~~~sp~~~~l~~~~~d-g------------~v~v 866 (1249)
T 3sfz_A 820 -----------------KVLLFDIHT--SGLLAEIHTGHHSTI-QYCDFSPYDHLAVIALSQ-Y------------CVEL 866 (1249)
T ss_dssp -----------------EEEEEETTT--CCEEEEEECSSSSCC-CEEEECSSTTEEEEECSS-S------------CEEE
T ss_pred -----------------cEEEEEecC--CCceeEEcCCCCCce-EEEEEcCCCCEEEEEeCC-C------------eEEE
Confidence 233445442 222111 1 122222 234567899999998765 2 4789
Q ss_pred EeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCCC
Q 009420 355 YRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPH 397 (535)
Q Consensus 355 YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~~ 397 (535)
||..+. +-...-...... -......|||+.+++|+...
T Consensus 867 wd~~~~---~~~~~~~~h~~~--v~~v~~spdg~~l~s~s~dg 904 (1249)
T 3sfz_A 867 WNIDSR---LKVADCRGHLSW--VHGVMFSPDGSSFLTASDDQ 904 (1249)
T ss_dssp EETTTT---EEEEEECCCSSC--EEEEEECTTSSEEEEEETTS
T ss_pred EEcCCC---ceeeecCCCccc--eEEEEECCCCCEEEEEeCCC
Confidence 998876 322111111111 12345678999999888654
No 88
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.81 E-value=0.036 Score=54.88 Aligned_cols=29 Identities=17% Similarity=0.231 Sum_probs=21.5
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCce
Q 009420 105 AVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWK 139 (535)
Q Consensus 105 ~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~ 139 (535)
++.+||+++++|+.+ ..+++||.. +.+|.
T Consensus 15 ~~s~~~~~l~~~~~d---~~v~i~~~~---~~~~~ 43 (372)
T 1k8k_C 15 AWNKDRTQIAICPNN---HEVHIYEKS---GNKWV 43 (372)
T ss_dssp EECTTSSEEEEECSS---SEEEEEEEE---TTEEE
T ss_pred EECCCCCEEEEEeCC---CEEEEEeCC---CCcEE
Confidence 455799999998763 579999987 55443
No 89
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.77 E-value=0.29 Score=52.95 Aligned_cols=146 Identities=15% Similarity=0.089 Sum_probs=72.1
Q ss_pred EEeeCCcEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCccccc
Q 009420 206 FLNVDGFLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQA 283 (535)
Q Consensus 206 ~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~ 283 (535)
...|||++++.|+ ..+.+||..+++....+.... .+.....+...-+... .+++.++.|+.+.
T Consensus 197 ~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~---~~~~~h~~~V~~v~~s------pdg~~l~s~s~D~------ 261 (611)
T 1nr0_A 197 RYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS---LKNVAHSGSVFGLTWS------PDGTKIASASADK------ 261 (611)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTT---SSSCSSSSCEEEEEEC------TTSSEEEEEETTS------
T ss_pred EECCCCCEEEEEECCCcEEEEECCCCcEeeeecccc---ccccccCCCEEEEEEC------CCCCEEEEEeCCC------
Confidence 3457999888876 468899988876543331100 0100011221111112 2678888888652
Q ss_pred ccccccccCCceEEEEecCCCCCeeee-cCCCC-ceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCC
Q 009420 284 EKGVFVAALNTCARIKITDPTPTWVLE-TMPQP-RVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIP 361 (535)
Q Consensus 284 ~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~-R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~ 361 (535)
++..+|+.. .+.... ..... ......+. .+++.++.++.+ + .+.+||+.+.
T Consensus 262 ----------~v~lWd~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~l~s~s~d-~------------~i~~~~~~~~- 314 (611)
T 1nr0_A 262 ----------TIKIWNVAT--LKVEKTIPVGTRIEDQQLGII-WTKQALVSISAN-G------------FINFVNPELG- 314 (611)
T ss_dssp ----------EEEEEETTT--TEEEEEEECCSSGGGCEEEEE-ECSSCEEEEETT-C------------CEEEEETTTT-
T ss_pred ----------eEEEEeCCC--CceeeeecCCCCccceeEEEE-EcCCEEEEEeCC-C------------cEEEEeCCCC-
Confidence 233444432 222211 21111 01111122 377777777654 2 4688998876
Q ss_pred CCceeecCCCCCCcccccceeecCCCcEEEecCCCC
Q 009420 362 GSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPH 397 (535)
Q Consensus 362 g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~~ 397 (535)
+-...-.-..... ......|||+.++.|+...
T Consensus 315 --~~~~~~~gh~~~v--~~l~~spdg~~l~s~s~D~ 346 (611)
T 1nr0_A 315 --SIDQVRYGHNKAI--TALSSSADGKTLFSADAEG 346 (611)
T ss_dssp --EEEEEECCCSSCE--EEEEECTTSSEEEEEETTS
T ss_pred --CcceEEcCCCCCE--EEEEEeCCCCEEEEEeCCC
Confidence 4322111111111 1234568999999998653
No 90
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.77 E-value=0.22 Score=47.79 Aligned_cols=134 Identities=11% Similarity=0.032 Sum_probs=70.9
Q ss_pred eeEEEECCCCCEEECccc--cccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEe
Q 009420 79 HSVEYSVLTNEFRPLFVQ--SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHIL 156 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L 156 (535)
++.+||..|++....-.. +.....+.++.++|+.+++|+.+ ..+++||.. +.+-. ..+.... ....+.-
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D---g~v~iw~~~---~~~~~--~~~~~h~-~~~~~~~ 116 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ---QQKRL--RNMTSHS-ARVGSLS 116 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SEEEEEETT---TTEEE--EEEECCS-SCEEEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC---CcEEEeecC---CceeE--EEecCcc-ceEEEee
Confidence 578999999887654322 22233345567899999999874 579999987 44322 1111111 1122233
Q ss_pred cCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCe
Q 009420 157 PDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNK 230 (535)
Q Consensus 157 ~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~ 230 (535)
.++++++.|+.+.. ...+..... .. ....+.... .........++|+.++.++ ..+.+||..+.+
T Consensus 117 ~~~~~l~s~~~~~~-~~~~~~~~~-~~-~~~~~~~~~------~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 117 WNSYILSSGSRSGH-IHHHDVRVA-EH-HVATLSGHS------QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp EETTEEEEEETTSE-EEEEETTSS-SC-EEEEEECCS------SCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred cCCCEEEEEecCCc-eEeeecCCC-ce-eEEEEcCcc------CceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 36788888776542 222211100 11 111111110 0111234456888777775 357889987653
No 91
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.75 E-value=0.083 Score=51.49 Aligned_cols=222 Identities=13% Similarity=0.163 Sum_probs=113.6
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcc-cccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCC
Q 009420 105 AVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGAR-RWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPN 182 (535)
Q Consensus 105 ~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~-R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~ 182 (535)
++-+||++++.|+.+ ..+++||.. +..- +..+... ..-.++...+|++.++.|+.++ .+.+| ..+. ..
T Consensus 20 ~fsp~~~~l~s~~~d---g~v~lWd~~---~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~-~i~vwd~~~~-~~ 89 (304)
T 2ynn_A 20 DFHPTEPWVLTTLYS---GRVELWNYE---TQVE--VRSIQVTETPVRAGKFIARKNWIIVGSDDF-RIRVFNYNTG-EK 89 (304)
T ss_dssp EECSSSSEEEEEETT---SEEEEEETT---TTEE--EEEEECCSSCEEEEEEEGGGTEEEEEETTS-EEEEEETTTC-CE
T ss_pred EECCCCCEEEEEcCC---CcEEEEECC---CCce--eEEeeccCCcEEEEEEeCCCCEEEEECCCC-EEEEEECCCC-cE
Confidence 455799999999874 579999987 4322 1122111 1122455667899999888764 56677 3321 11
Q ss_pred eeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEE-EecCCCCCCCCCCCCCCCceEeecccc
Q 009420 183 VYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVV-KQYPAIPGGDPRSYPSSGSAVLLPLKN 259 (535)
Q Consensus 183 w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~-~~~p~~p~~~~R~~~~~g~~v~lpl~~ 259 (535)
-..+. ...+ .--.+...|++++++.|+ ..+.+||.+++.-. +.+ ... ...- -+....|
T Consensus 90 ~~~~~---~h~~------~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~---~~h--~~~v--~~v~~~p--- 150 (304)
T 2ynn_A 90 VVDFE---AHPD------YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF---EGH--EHFV--MCVAFNP--- 150 (304)
T ss_dssp EEEEE---CCSS------CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE---CCC--CSCE--EEEEECT---
T ss_pred EEEEe---CCCC------cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh---ccc--CCcE--EEEEECC---
Confidence 11111 1111 011234567888888876 46889998876321 111 211 1100 0111211
Q ss_pred cCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeecCCCCceeceeEE--ccCCeEEEEcCCCC
Q 009420 260 LLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTL--LPNGNVLLINGAGK 337 (535)
Q Consensus 260 ~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~~~R~~~~~v~--lpdG~I~vvGG~~~ 337 (535)
.++++++.|+.+. ++..+|+.......+... ...+.-..... .++++.++.|+.+
T Consensus 151 -----~~~~~l~sgs~D~----------------~v~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~s~D- 207 (304)
T 2ynn_A 151 -----KDPSTFASGCLDR----------------TVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITASDD- 207 (304)
T ss_dssp -----TCTTEEEEEETTS----------------EEEEEETTCSSCSEEEEC-CCTTCEEEEEECCSTTCCEEEEEETT-
T ss_pred -----CCCCEEEEEeCCC----------------eEEEEECCCCCccceecc-CCcCcEEEEEEEEcCCCCEEEEEcCC-
Confidence 2567888888652 233455433222222211 11111111112 2478888888765
Q ss_pred CCCCcccCCCCccccEEEeCCCCCCCcee-ecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 338 GTAGWELGRDPVLAPVVYRPDNIPGSRFD-LQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 338 g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
+ ++.+||..+. +-. .+.. .. ..-..+...||+++++.|+..
T Consensus 208 ~------------~i~iWd~~~~---~~~~~~~~-h~--~~v~~~~~~p~~~~l~s~s~D 249 (304)
T 2ynn_A 208 L------------TIKIWDYQTK---SCVATLEG-HM--SNVSFAVFHPTLPIIISGSED 249 (304)
T ss_dssp S------------EEEEEETTTT---EEEEEEEC-CS--SCEEEEEECSSSSEEEEEETT
T ss_pred C------------eEEEEeCCCC---ccceeeCC-CC--CCEEEEEECCCCCEEEEEcCC
Confidence 2 5789998876 421 2211 01 111234567999999999864
No 92
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.75 E-value=0.16 Score=51.67 Aligned_cols=137 Identities=9% Similarity=0.024 Sum_probs=72.5
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEE-EEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEec
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLI-QTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~-v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~ 157 (535)
.+.+||+.+++....-..+.....+.++.++|+.+ +.++. + ..+.+||+. +.+.... +.....-.+++.-+
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~--~~i~~~d~~---~~~~~~~--~~~~~~~~~~~~~~ 263 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI-S--EDISVIDRK---TKLEIRK--TDKIGLPRGLLLSK 263 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT-T--TEEEEEETT---TTEEEEE--CCCCSEEEEEEECT
T ss_pred EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC-C--CcEEEEECC---CCcEEEE--ecCCCCceEEEEcC
Confidence 57899998876543322222222334456777755 55433 2 579999987 5543322 22222223455556
Q ss_pred CCcEEEEcCccC-------CeeEEE-eCCCCCCeeeeccccccCCccccCCCcc-eEEEeeCCc-EEEEec--CeEEEEE
Q 009420 158 DGRIIIIGGRRQ-------FNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYP-FVFLNVDGF-LFIFAN--NRAILFD 225 (535)
Q Consensus 158 dG~vyvvGG~~~-------~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp-~~~~~~dG~-ifv~gg--~~~~~yD 225 (535)
||+.+++++... ..+.+| +.+. +... .+... ..+ .....++|+ +|+.+. ..+.+||
T Consensus 264 ~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~--~~~~--~~~~~--------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d 331 (433)
T 3bws_A 264 DGKELYIAQFSASNQESGGGRLGIYSMDKE--KLID--TIGPP--------GNKRHIVSGNTENKIYVSDMCCSKIEVYD 331 (433)
T ss_dssp TSSEEEEEEEESCTTCSCCEEEEEEETTTT--EEEE--EEEEE--------ECEEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCCccccCCCeEEEEECCCC--cEEe--eccCC--------CCcceEEECCCCCEEEEEecCCCEEEEEE
Confidence 887777776432 234466 3321 1111 00000 012 234457885 777654 4688999
Q ss_pred CCCCeEEEec
Q 009420 226 YVNNKVVKQY 235 (535)
Q Consensus 226 p~t~~W~~~~ 235 (535)
..+++....+
T Consensus 332 ~~~~~~~~~~ 341 (433)
T 3bws_A 332 LKEKKVQKSI 341 (433)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCcEEEEe
Confidence 9988765433
No 93
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.72 E-value=1.1 Score=49.97 Aligned_cols=253 Identities=11% Similarity=-0.009 Sum_probs=123.1
Q ss_pred eEEEECCCCCEEECcc---ccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCC--CCcccccceEE
Q 009420 80 SVEYSVLTNEFRPLFV---QSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDG--LGARRWYATDH 154 (535)
Q Consensus 80 ~~~yDp~t~~w~~~~~---~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~--m~~~R~y~s~~ 154 (535)
..+||+.+++++.... .......+.....+|+|++ |... ..+.+||+. +.+++.... +.... -.+.+
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~---~Gl~~~~~~---~~~~~~~~~~~~~~~~-v~~i~ 456 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYL---GNISYYNTR---LKKFQIIELEKNELLD-VRVFY 456 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETT---EEEEEECSS---SCEEEECCSTTTCCCC-EEEEE
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eecc---CCEEEEcCC---CCcEEEeccCCCCCCe-EEEEE
Confidence 4567777776665421 1111111222334788877 3221 357889998 777776652 22222 22344
Q ss_pred EecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec-CeEEEEECCCCeEE
Q 009420 155 ILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN-NRAILFDYVNNKVV 232 (535)
Q Consensus 155 ~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-~~~~~yDp~t~~W~ 232 (535)
.-.+|+|++... ...-+| +.+. .+......... . ...+.--....-.+|+|++... ....+||++++++.
T Consensus 457 ~d~~g~lwigt~---~Gl~~~~~~~~--~~~~~~~~~~~-~--~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~ 528 (781)
T 3v9f_A 457 EDKNKKIWIGTH---AGVFVIDLASK--KVIHHYDTSNS-Q--LLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVR 528 (781)
T ss_dssp ECTTSEEEEEET---TEEEEEESSSS--SCCEEECTTTS-S--CSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEE
T ss_pred ECCCCCEEEEEC---CceEEEeCCCC--eEEecccCccc-c--cccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEE
Confidence 445688887432 234455 5432 33222111000 0 0001111223445889988764 56889999999887
Q ss_pred EecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeecC
Q 009420 233 KQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETM 312 (535)
Q Consensus 233 ~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m 312 (535)
. ... +...+-. ....++. ..+|+|++... . +- ...|++.......|+.. ..+
T Consensus 529 ~-~~~-~~~l~~~----~i~~i~~-------d~~g~lWi~T~-~-Gl-----v~~~d~~~~~~~~~~~~--------~gl 580 (781)
T 3v9f_A 529 K-FNQ-YEGFCSN----TINQIYR-------SSKGQMWLATG-E-GL-----VCFPSARNFDYQVFQRK--------EGL 580 (781)
T ss_dssp E-ECT-TTTCSCS----CEEEEEE-------CTTSCEEEEET-T-EE-----EEESCTTTCCCEEECGG--------GTC
T ss_pred E-ccC-CCCCCCC----eeEEEEE-------CCCCCEEEEEC-C-Cc-----eEEECCCCCcEEEcccc--------CCC
Confidence 4 431 1110111 1111211 12677777533 1 11 01223333333333211 034
Q ss_pred CCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecC---CCCCCcccccceeecCCCcE
Q 009420 313 PQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQN---PSTIPRMYHSTAVLLRDGRV 389 (535)
Q Consensus 313 ~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~---~~~~~R~yhs~a~LlpDG~V 389 (535)
+..... +.+.-.+|+|++.+. . | +.+|||++. +++... .++.......+++...||++
T Consensus 581 ~~~~i~-~i~~d~~g~lW~~t~-~-G-------------l~~~~~~~~---~~~~~~~~dGl~~~~f~~~~~~~~~~G~l 641 (781)
T 3v9f_A 581 PNTHIR-AISEDKNGNIWASTN-T-G-------------ISCYITSKK---CFYTYDHSNNIPQGSFISGCVTKDHNGLI 641 (781)
T ss_dssp SCCCCC-EEEECSSSCEEEECS-S-C-------------EEEEETTTT---EEEEECGGGTCCSSCEEEEEEEECTTSCE
T ss_pred CCceEE-EEEECCCCCEEEEcC-C-c-------------eEEEECCCC---ceEEecccCCccccccccCceEECCCCEE
Confidence 433332 334456799988542 2 2 468999988 776543 23333322234556789999
Q ss_pred EEecCC
Q 009420 390 LVGGSN 395 (535)
Q Consensus 390 ~v~GG~ 395 (535)
|++|.+
T Consensus 642 ~~g~~~ 647 (781)
T 3v9f_A 642 YFGSIN 647 (781)
T ss_dssp EEEETT
T ss_pred EEECCC
Confidence 998865
No 94
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.70 E-value=0.17 Score=47.55 Aligned_cols=82 Identities=15% Similarity=0.140 Sum_probs=53.5
Q ss_pred ceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCC-CCceecCCCCcccccceEEEe
Q 009420 78 AHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDES-CDWKEIDGLGARRWYATDHIL 156 (535)
Q Consensus 78 ~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~-~~W~~~~~m~~~R~y~s~~~L 156 (535)
..+.+||+.+++...+... .....+.++-+||+.+++++. ..+.+||.. + .+...+............+.-
T Consensus 22 ~~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~~----~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNSE----GLLYRLSLA---GDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEET----TEEEEEESS---SCCSCEECCCTTCCCBCSCCEEC
T ss_pred eeEEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEcC----CeEEEEeCC---CCCCceEeccccccccccceEEC
Confidence 3688999999987765432 222333456789999888753 479999998 6 665555433222223345666
Q ss_pred cCCcEEEEcCc
Q 009420 157 PDGRIIIIGGR 167 (535)
Q Consensus 157 ~dG~vyvvGG~ 167 (535)
+||+.+++++.
T Consensus 94 pdg~~l~~~~~ 104 (297)
T 2ojh_A 94 PDGALYAISDK 104 (297)
T ss_dssp TTSSEEEEEEC
T ss_pred CCCCEEEEEEe
Confidence 78988888774
No 95
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.70 E-value=0.55 Score=46.26 Aligned_cols=148 Identities=12% Similarity=0.047 Sum_probs=79.1
Q ss_pred eeEEEECCCCCEEECcc-ccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCC--CceecCC-C-----Ccccc
Q 009420 79 HSVEYSVLTNEFRPLFV-QSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESC--DWKEIDG-L-----GARRW 149 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~-~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~--~W~~~~~-m-----~~~R~ 149 (535)
.+.++|+.+++...... ..-....+.++.++|+||+.... ...+.+||+. .. .-..+.. . ...-.
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~---~~~v~~~~~~---g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA---LHQVFKLDPH---SKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT---TTEEEEECTT---CSSCCSEEESBTTBCCCSTTCCS
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC---CCEEEEEeCC---CCeEEEEEecccCCCCCCccccC
Confidence 58899999988754321 11112234456679999998754 3679999986 33 1122211 0 01111
Q ss_pred cc-eEEEec-CCcEEEEcCccCCeeEEEeCCCCCCee-eeccccccCC-ccccCCCcceEEE-eeC-CcEEEEe--cCeE
Q 009420 150 YA-TDHILP-DGRIIIIGGRRQFNYEFYPKNGAPNVY-SLPFLVQTND-PRVENNLYPFVFL-NVD-GFLFIFA--NNRA 221 (535)
Q Consensus 150 y~-s~~~L~-dG~vyvvGG~~~~~~E~yP~~~~~~w~-~~~~l~~~~~-~~~~~~~yp~~~~-~~d-G~ifv~g--g~~~ 221 (535)
.+ .+++-+ +|++||..+.....+.+|.... ... .+... ...+ .....-.+|...+ -++ |+||+.. ++.+
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g--~~~~~~~~~-g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I 220 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG--KFVTQWGEE-SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRI 220 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEECTTS--CEEEEECEE-CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC--CEEEEeccC-CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEE
Confidence 23 445555 7999999864334555663221 111 11100 0000 0000012465544 466 8999985 4678
Q ss_pred EEEECCCCeEEEec
Q 009420 222 ILFDYVNNKVVKQY 235 (535)
Q Consensus 222 ~~yDp~t~~W~~~~ 235 (535)
.+||+.+++....+
T Consensus 221 ~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 221 QCFKTDTKEFVREI 234 (329)
T ss_dssp EEEETTTCCEEEEE
T ss_pred EEEECCCCcEEEEE
Confidence 99999977766444
No 96
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.68 E-value=0.43 Score=48.82 Aligned_cols=253 Identities=11% Similarity=0.080 Sum_probs=125.8
Q ss_pred EeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCe
Q 009420 45 LLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKK 124 (535)
Q Consensus 45 ~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~ 124 (535)
+-.+|+.++.|+.+ | .+.+||..+++-...-..+.....+ +..++.++++|+.+ ..
T Consensus 125 ~~~~g~~l~sg~~d----------g---------~i~vwd~~~~~~~~~~~~h~~~v~~--~~~~~~~l~s~~~d---g~ 180 (445)
T 2ovr_B 125 LQFCGNRIVSGSDD----------N---------TLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNIIISGSTD---RT 180 (445)
T ss_dssp EEEETTEEEEEETT----------S---------CEEEEETTTCCEEEECCCCSSCEEE--EEEETTEEEEEETT---SC
T ss_pred EEEcCCEEEEEECC----------C---------cEEEEECCCCcEEEEEcCCCCCEEE--EEecCCEEEEEeCC---Ce
Confidence 33567777777643 2 4789999887644322112111111 11257788888764 57
Q ss_pred EEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcc
Q 009420 125 IRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYP 203 (535)
Q Consensus 125 v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp 203 (535)
+.+||.. +.+-. ..+......-..... +++.+++|+.++ .+.+| ..+. +.. ..+.... .+
T Consensus 181 i~vwd~~---~~~~~--~~~~~h~~~v~~~~~-~~~~l~s~s~dg-~i~~wd~~~~--~~~--~~~~~~~--------~~ 241 (445)
T 2ovr_B 181 LKVWNAE---TGECI--HTLYGHTSTVRCMHL-HEKRVVSGSRDA-TLRVWDIETG--QCL--HVLMGHV--------AA 241 (445)
T ss_dssp EEEEETT---TTEEE--EEECCCSSCEEEEEE-ETTEEEEEETTS-EEEEEESSSC--CEE--EEEECCS--------SC
T ss_pred EEEEECC---cCcEE--EEECCCCCcEEEEEe-cCCEEEEEeCCC-EEEEEECCCC--cEE--EEEcCCc--------cc
Confidence 8999987 44221 112111111223333 577788887664 46666 3321 111 1111110 12
Q ss_pred eEEEeeCCcEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCccc
Q 009420 204 FVFLNVDGFLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYE 281 (535)
Q Consensus 204 ~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~ 281 (535)
...+..+|+.++.|+ ..+.+||..+.+-...+ ... .. ....+ . .+++.+++|+.+.
T Consensus 242 v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~--~~----~v~~~-~--------~~~~~l~~~~~d~---- 299 (445)
T 2ovr_B 242 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL---QGH--TN----RVYSL-Q--------FDGIHVVSGSLDT---- 299 (445)
T ss_dssp EEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEE---CCC--SS----CEEEE-E--------ECSSEEEEEETTS----
T ss_pred EEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEe---cCC--CC----ceEEE-E--------ECCCEEEEEeCCC----
Confidence 233444888777775 45789999887755333 211 11 11111 1 2667777777541
Q ss_pred ccccccccccCCceEEEEecCCCCCeeeecCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCC
Q 009420 282 QAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIP 361 (535)
Q Consensus 282 ~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~ 361 (535)
.+..+|+......++. ...... ...+ -++++.+++|+.+ | .+.+||..+.
T Consensus 300 ------------~i~i~d~~~~~~~~~~-~~~~~~--v~~~-~~~~~~l~~~~~d-g------------~i~vwd~~~~- 349 (445)
T 2ovr_B 300 ------------SIRVWDVETGNCIHTL-TGHQSL--TSGM-ELKDNILVSGNAD-S------------TVKIWDIKTG- 349 (445)
T ss_dssp ------------CEEEEETTTCCEEEEE-CCCCSC--EEEE-EEETTEEEEEETT-S------------CEEEEETTTC-
T ss_pred ------------eEEEEECCCCCEEEEE-cCCccc--EEEE-EEeCCEEEEEeCC-C------------eEEEEECCCC-
Confidence 2345555431111111 111111 1222 3478888888755 2 5789998765
Q ss_pred CCce-eecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 362 GSRF-DLQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 362 g~~W-t~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
+- ..+.... ... ..+..+..|++.+++|+..
T Consensus 350 --~~~~~~~~~~-~~~-~~v~~~~~~~~~l~s~~~d 381 (445)
T 2ovr_B 350 --QCLQTLQGPN-KHQ-SAVTCLQFNKNFVITSSDD 381 (445)
T ss_dssp --CEEEEECSTT-SCS-SCEEEEEECSSEEEEEETT
T ss_pred --cEEEEEccCC-CCC-CCEEEEEECCCEEEEEeCC
Confidence 32 2222110 000 1123344589999999854
No 97
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.68 E-value=0.59 Score=46.35 Aligned_cols=238 Identities=10% Similarity=0.059 Sum_probs=115.8
Q ss_pred CCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCC-CCccc-ccceEEEecCCcEEEEc
Q 009420 88 NEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDG-LGARR-WYATDHILPDGRIIIIG 165 (535)
Q Consensus 88 ~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~-m~~~R-~y~s~~~L~dG~vyvvG 165 (535)
.+|+++.........+..+..++.++++|-. ..+.+-+-. ..+|+.+.. ...+. ...++.. .++++|++|
T Consensus 25 ~~W~~~~~~~~~~~~~v~~~~~~~~~~~G~~----g~i~~s~Dg---G~tW~~~~~~~~~~~~~~~~i~~-~~~~~~~~g 96 (327)
T 2xbg_A 25 NPWEAIQLPTTATILDMSFIDRHHGWLVGVN----ATLMETRDG---GQTWEPRTLVLDHSDYRFNSVSF-QGNEGWIVG 96 (327)
T ss_dssp CCEEEEECSCSSCEEEEEESSSSCEEEEETT----TEEEEESST---TSSCEECCCCCSCCCCEEEEEEE-ETTEEEEEE
T ss_pred CCceEeecCCCCcEEEEEECCCCcEEEEcCC----CeEEEeCCC---CCCCeECCCCCCCCCccEEEEEe-cCCeEEEEE
Confidence 4577765332222222334456788887632 123332222 468998763 32222 2234444 367888875
Q ss_pred CccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecCe-EEEEECCCCeEEEecCCCCCCCC
Q 009420 166 GRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNR-AILFDYVNNKVVKQYPAIPGGDP 243 (535)
Q Consensus 166 G~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~-~~~yDp~t~~W~~~~p~~p~~~~ 243 (535)
- .+ .+| ....+..|......... +...+ ......++++|+.+... +.+-+-...+|.+ +.. +. .
T Consensus 97 ~-~g---~i~~S~DgG~tW~~~~~~~~~-----~~~~~-~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~-~~~-~~--~ 162 (327)
T 2xbg_A 97 E-PP---IMLHTTDGGQSWSQIPLDPKL-----PGSPR-LIKALGNGSAEMITNVGAIYRTKDSGKNWQA-LVQ-EA--I 162 (327)
T ss_dssp E-TT---EEEEESSTTSSCEECCCCTTC-----SSCEE-EEEEEETTEEEEEETTCCEEEESSTTSSEEE-EEC-SC--C
T ss_pred C-CC---eEEEECCCCCCceECccccCC-----CCCeE-EEEEECCCCEEEEeCCccEEEEcCCCCCCEE-eec-CC--C
Confidence 2 21 344 33324578654321000 01111 23345688999887543 2222223567985 421 21 1
Q ss_pred CCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCC-CCCeeeecCCCCceeceeE
Q 009420 244 RSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDP-TPTWVLETMPQPRVMGDMT 322 (535)
Q Consensus 244 R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~-~~~W~~~~m~~~R~~~~~v 322 (535)
... -..+.. .+++++++|-.. .-+ -..+. ..+|+....+.++....++
T Consensus 163 ~~~---~~~~~~---------~~~~~~~~g~~G-~~~------------------~S~d~gG~tW~~~~~~~~~~~~~~~ 211 (327)
T 2xbg_A 163 GVM---RNLNRS---------PSGEYVAVSSRG-SFY------------------STWEPGQTAWEPHNRTTSRRLHNMG 211 (327)
T ss_dssp CCE---EEEEEC---------TTSCEEEEETTS-SEE------------------EEECTTCSSCEEEECCSSSCEEEEE
T ss_pred cce---EEEEEc---------CCCcEEEEECCC-cEE------------------EEeCCCCCceeECCCCCCCccceeE
Confidence 111 011121 156777766321 111 11111 3689887444455556666
Q ss_pred EccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCC--CCCCcccccceeecCCCcEEEecCC
Q 009420 323 LLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNP--STIPRMYHSTAVLLRDGRVLVGGSN 395 (535)
Q Consensus 323 ~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~--~~~~R~yhs~a~LlpDG~V~v~GG~ 395 (535)
..++|++|+++.. | .+.+.+ ++.|++|+.+.. ++.....++.+ ..+++++|++|+.
T Consensus 212 ~~~~g~~~~~~~~--G------------~~~~s~--~D~G~tW~~~~~~~~~~~~~~~~v~-~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 212 FTPDGRLWMIVNG--G------------KIAFSD--PDNSENWGELLSPLRRNSVGFLDLA-YRTPNEVWLAGGA 269 (327)
T ss_dssp ECTTSCEEEEETT--T------------EEEEEE--TTEEEEECCCBCTTSSCCSCEEEEE-ESSSSCEEEEEST
T ss_pred ECCCCCEEEEeCC--c------------eEEEec--CCCCCeeEeccCCcccCCcceEEEE-ecCCCEEEEEeCC
Confidence 6789999987642 2 122232 234558987643 22222223333 3468999999874
No 98
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.67 E-value=0.26 Score=49.49 Aligned_cols=62 Identities=13% Similarity=0.126 Sum_probs=38.2
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCC----C-CEEECccccccccccceecCC-CcEEEEcCCCC
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLT----N-EFRPLFVQSNVWCSSGAVRPD-GVLIQTGGFND 120 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t----~-~w~~~~~~~~~~c~~~~~l~d-G~l~v~GG~~~ 120 (535)
+++++++.|+.+ | .+.+||..+ . ....+. .+.....+..+.++ ++++++|+.+
T Consensus 77 ~~~~~l~~~~~d----------g---------~v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d- 135 (416)
T 2pm9_A 77 HNNKIIAGALDN----------G---------SLELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGGNN- 135 (416)
T ss_dssp SSSSCEEEEESS----------S---------CEEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEECSS-
T ss_pred CCCCeEEEEccC----------C---------eEEEeecccccccccchhhcc-CCccceEEEEEcCCCCCEEEEEcCC-
Confidence 688877777643 2 478899877 2 222222 12222223345566 8899998864
Q ss_pred CCCeEEEEcCC
Q 009420 121 GEKKIRSFVPC 131 (535)
Q Consensus 121 g~~~v~~ydp~ 131 (535)
..+.+||..
T Consensus 136 --g~v~iwd~~ 144 (416)
T 2pm9_A 136 --GEIFIWDMN 144 (416)
T ss_dssp --SCEEBCBTT
T ss_pred --CeEEEEECC
Confidence 568999987
No 99
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.65 E-value=0.48 Score=44.97 Aligned_cols=148 Identities=8% Similarity=0.013 Sum_probs=78.5
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc-cccccccceecCCCcEEEEcCCCCCCCe
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ-SNVWCSSGAVRPDGVLIQTGGFNDGEKK 124 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~ 124 (535)
-++|++|+....+ ..+..||+. ++++..... ......+.++.++|+||+.... ...
T Consensus 65 ~~~g~l~v~~~~~-------------------~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~ 121 (299)
T 2z2n_A 65 SSDGEVWFTENAA-------------------NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNR 121 (299)
T ss_dssp CTTSCEEEEETTT-------------------TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTE
T ss_pred CCCCCEEEeCCCC-------------------CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC---Cce
Confidence 3688888775421 136778876 556554422 1222233445568999998643 256
Q ss_pred EEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcce
Q 009420 125 IRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPF 204 (535)
Q Consensus 125 v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~ 204 (535)
+.+||+. .+......-.....-.+.+.-.+|++|+..-. ...+.+|.... +...... .. ....|.
T Consensus 122 i~~~d~~----g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~~~i~~~~~~g--~~~~~~~-~~-------~~~~~~ 186 (299)
T 2z2n_A 122 IGRITDD----GKIREYELPNKGSYPSFITLGSDNALWFTENQ-NNAIGRITESG--DITEFKI-PT-------PASGPV 186 (299)
T ss_dssp EEEECTT----CCEEEEECSSTTCCEEEEEECTTSCEEEEETT-TTEEEEECTTC--CEEEEEC-SS-------TTCCEE
T ss_pred EEEECCC----CCEEEecCCCCCCCCceEEEcCCCCEEEEeCC-CCEEEEEcCCC--cEEEeeC-CC-------CCCcce
Confidence 8889984 23332211011122234555568999986532 22344552221 2222111 00 011344
Q ss_pred E-EEeeCCcEEEEe--cCeEEEEECCCCeEE
Q 009420 205 V-FLNVDGFLFIFA--NNRAILFDYVNNKVV 232 (535)
Q Consensus 205 ~-~~~~dG~ifv~g--g~~~~~yDp~t~~W~ 232 (535)
. ..-++|+||+.. ++.+.+||+ +++..
T Consensus 187 ~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 216 (299)
T 2z2n_A 187 GITKGNDDALWFVEIIGNKIGRITT-SGEIT 216 (299)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred eEEECCCCCEEEEccCCceEEEECC-CCcEE
Confidence 3 344689999886 457889999 66655
No 100
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.63 E-value=0.46 Score=47.68 Aligned_cols=280 Identities=13% Similarity=0.110 Sum_probs=134.3
Q ss_pred EeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEE------EC---ccccccccccceecCCCcEEEE
Q 009420 45 LLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFR------PL---FVQSNVWCSSGAVRPDGVLIQT 115 (535)
Q Consensus 45 ~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~------~~---~~~~~~~c~~~~~l~dG~l~v~ 115 (535)
..+||++++-||-+...+ | ..+.+.+|+...+.-. .. .......+ ..++-.++.+++.
T Consensus 22 fs~dg~~l~sGGg~~~~s------G------i~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~-v~s~~~~~~~~~~ 88 (365)
T 4h5i_A 22 FLNNDTLLVAGGGGEGNN------G------IPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDS-PTAIDASKGIILV 88 (365)
T ss_dssp EEETTEEEEEEECCSSSS------S------CCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCC-CCEEEEETTEEEE
T ss_pred EeCCCcEEEEECCCcccc------C------CCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCc-eEEEEeCCCEEEE
Confidence 358999999988431111 2 1235777876544321 11 10111111 1123347888888
Q ss_pred cCCCC--------CCCeEEEEcCCCCCCCCcee---cCCC--Ccccccc-eEEEecCCcEEEEc-CccCCeeEEE-eCCC
Q 009420 116 GGFND--------GEKKIRSFVPCNDESCDWKE---IDGL--GARRWYA-TDHILPDGRIIIIG-GRRQFNYEFY-PKNG 179 (535)
Q Consensus 116 GG~~~--------g~~~v~~ydp~~~~~~~W~~---~~~m--~~~R~y~-s~~~L~dG~vyvvG-G~~~~~~E~y-P~~~ 179 (535)
|.... ..+.+++|+.... ...... ..-. ....-|. .++.-+||+.++++ |.....+.+| +.+.
T Consensus 89 g~~~~~~~l~s~~~d~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 89 GCNENSTKITQGKGNKHLRKFKYDKV-NDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL 167 (365)
T ss_dssp ECCCCHHHHHHTSCCCCEEEEEEETT-TTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT
T ss_pred EECCCccEEEEecCCCcEEEEEecCC-CceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC
Confidence 86532 1356777775410 122111 1111 1111122 34555799987764 4444567777 4431
Q ss_pred CCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec-CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeeccc
Q 009420 180 APNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN-NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLK 258 (535)
Q Consensus 180 ~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~ 258 (535)
.... .+.... ..+ .+...|||++++.+. +...+++..+++...... ... ..... .+....|
T Consensus 168 --~~~~--~~~~~~------~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~-~~~--~~~~v--~~v~fsp-- 229 (365)
T 4h5i_A 168 --TEKF--EIETRG------EVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARKT-DFD--KNWSL--SKINFIA-- 229 (365)
T ss_dssp --EEEE--EEECSS------CCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEEC-CCC--TTEEE--EEEEEEE--
T ss_pred --cEEE--EeCCCC------ceE-EEEEccCCceEEeccceeEEEEEeccCcceeeee-cCC--CCCCE--EEEEEcC--
Confidence 1111 111110 011 234468999888775 457788887776442111 111 11100 1122222
Q ss_pred ccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee---cC--CCCceeceeEEccCCeEEEEc
Q 009420 259 NLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE---TM--PQPRVMGDMTLLPNGNVLLIN 333 (535)
Q Consensus 259 ~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~---~m--~~~R~~~~~v~lpdG~I~vvG 333 (535)
+++.++.++.+.+. ...+..+|... ..+... .+ ...... +...-|||+++++|
T Consensus 230 -------dg~~l~~~s~d~~~------------~~~i~~~~~~~--~~~~~~~~~~~~~~~~~V~-~~~~Spdg~~lasg 287 (365)
T 4h5i_A 230 -------DDTVLIAASLKKGK------------GIVLTKISIKS--GNTSVLRSKQVTNRFKGIT-SMDVDMKGELAVLA 287 (365)
T ss_dssp -------TTEEEEEEEESSSC------------CEEEEEEEEET--TEEEEEEEEEEESSCSCEE-EEEECTTSCEEEEE
T ss_pred -------CCCEEEEEecCCcc------------eeEEeeccccc--ceecceeeeeecCCCCCeE-eEEECCCCCceEEE
Confidence 77888887654211 01122334332 112111 11 111122 23456999999999
Q ss_pred CCCCCCCCcccCCCCccccEEEeCCCCCCCce-eecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 334 GAGKGTAGWELGRDPVLAPVVYRPDNIPGSRF-DLQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 334 G~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W-t~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
+.+ + ++.+||.++. +- ..+........ ......|||+.++.|+.+
T Consensus 288 s~D-~------------~V~iwd~~~~---~~~~~~~~gH~~~V--~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 288 SND-N------------SIALVKLKDL---SMSKIFKQAHSFAI--TEVTISPDSTYVASVSAA 333 (365)
T ss_dssp ETT-S------------CEEEEETTTT---EEEEEETTSSSSCE--EEEEECTTSCEEEEEETT
T ss_pred cCC-C------------EEEEEECCCC---cEEEEecCcccCCE--EEEEECCCCCEEEEEeCC
Confidence 865 2 5789998876 42 22211111111 134567999999999964
No 101
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.63 E-value=0.15 Score=56.05 Aligned_cols=50 Identities=14% Similarity=0.030 Sum_probs=31.2
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 131 (535)
.+.+||..+++-...-..+.....+.++.++|+.++.|+.+ ..+++||..
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~ 502 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTL 502 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTT
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECC
Confidence 57889988775433222222222234456788888888764 578888865
No 102
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.62 E-value=0.14 Score=51.20 Aligned_cols=50 Identities=14% Similarity=0.044 Sum_probs=33.8
Q ss_pred eeEEEECCCCCEEECc----cccccccccceecCCCcEEEEcCCCCCCCeEEEEcCC
Q 009420 79 HSVEYSVLTNEFRPLF----VQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~----~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 131 (535)
.+.+||..+++-.... ..+.....+.++.+||+.++.|+.+ ..+++||..
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---~~i~iwd~~ 157 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---ICIKVWDLA 157 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETT
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECC
Confidence 5789999887632221 1233333345567899999999874 579999987
No 103
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.61 E-value=0.15 Score=49.99 Aligned_cols=50 Identities=20% Similarity=0.152 Sum_probs=32.8
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 131 (535)
.+.+||..+++-...-..+.....+..+.+++.+++.|+.+ ..+++||..
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~vwd~~ 137 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD---KTIKVWTIK 137 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT---SCEEEEETT
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC
Confidence 57899999886433222222222334456789999998874 578899875
No 104
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.60 E-value=0.38 Score=47.89 Aligned_cols=145 Identities=9% Similarity=-0.028 Sum_probs=73.3
Q ss_pred eeEEEECCCCC-------EEECccccccccccceecCC----C---cEEEEcCCCCCCCeEEEEcCCCCCCCC------c
Q 009420 79 HSVEYSVLTNE-------FRPLFVQSNVWCSSGAVRPD----G---VLIQTGGFNDGEKKIRSFVPCNDESCD------W 138 (535)
Q Consensus 79 ~~~~yDp~t~~-------w~~~~~~~~~~c~~~~~l~d----G---~l~v~GG~~~g~~~v~~ydp~~~~~~~------W 138 (535)
.+.+||..+++ ...+. .+.....+..+.++ | +++++|+.+ ..+.+||.. +.+ +
T Consensus 37 ~i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d---g~i~iw~~~---~~~~~~~~~~ 109 (397)
T 1sq9_A 37 YLKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELCLVATTSFS---GDLLFYRIT---REDETKKVIF 109 (397)
T ss_dssp EEEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEEEEEEEETT---SCEEEEEEE---ECTTTCCEEE
T ss_pred EEEEEECCCcccccCCCcceEEe-cCCCcEEEEEEecccccCCccccEEEEEcCC---CCEEEEEcc---CCcccccccc
Confidence 47888888876 22222 12222223345567 8 899998863 568888876 444 5
Q ss_pred eecCCCCc---ccccceEEEe----cCCcE-EEEcCccCCeeEEE-eCC-------CCCCeeeeccccc----cCCcccc
Q 009420 139 KEIDGLGA---RRWYATDHIL----PDGRI-IIIGGRRQFNYEFY-PKN-------GAPNVYSLPFLVQ----TNDPRVE 198 (535)
Q Consensus 139 ~~~~~m~~---~R~y~s~~~L----~dG~v-yvvGG~~~~~~E~y-P~~-------~~~~w~~~~~l~~----~~~~~~~ 198 (535)
..+..... ...-.+++.. ++++. +++|+.++ .+.+| ... ..-.|.....+.. ... .
T Consensus 110 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 185 (397)
T 1sq9_A 110 EKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT---P 185 (397)
T ss_dssp EEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS-CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSS---S
T ss_pred eeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-cEEEEeCCccccccccceeeccCcceeeeeeccccC---C
Confidence 55543321 1222345555 68888 88887764 34555 222 1001110000100 000 0
Q ss_pred CCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEEec
Q 009420 199 NNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVKQY 235 (535)
Q Consensus 199 ~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~ 235 (535)
...-..+...++| +++.|+ ..+.+||..+.+....+
T Consensus 186 ~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 186 SQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE
Confidence 0111134456788 777775 46889999987765433
No 105
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.59 E-value=1.3 Score=49.36 Aligned_cols=255 Identities=13% Similarity=0.100 Sum_probs=122.3
Q ss_pred eEEEECCCCCEEECcccc--------ccccccceecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCCceecCC----CCc
Q 009420 80 SVEYSVLTNEFRPLFVQS--------NVWCSSGAVRPDGV-LIQTGGFNDGEKKIRSFVPCNDESCDWKEIDG----LGA 146 (535)
Q Consensus 80 ~~~yDp~t~~w~~~~~~~--------~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~----m~~ 146 (535)
...||+.+++++...... .....+.....+|+ |++ |... ..+.+||+. +.++..... +..
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~---~Gl~~~d~~---~~~~~~~~~~~~~l~~ 451 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA---GGLSILHRN---SGQVENFNQRNSQLVN 451 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT---TEEEEEETT---TCCEEEECTTTSCCSC
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc---CceeEEeCC---CCcEEEeecCCCCcCC
Confidence 567888888887654211 11111222335788 665 3332 347889998 677765542 222
Q ss_pred ccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecCeEEEEE
Q 009420 147 RRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFD 225 (535)
Q Consensus 147 ~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~~~~yD 225 (535)
.+ -.+.+.-.+|+|++-.. . ..-+| |.+. ++........... ...+..-....-.+|+|++.......+||
T Consensus 452 ~~-v~~i~~d~~g~lwigt~-~--Gl~~~~~~~~--~~~~~~~~~~~~~--~~~~~i~~i~~d~~g~lWigt~~Gl~~~~ 523 (795)
T 4a2l_A 452 EN-VYAILPDGEGNLWLGTL-S--ALVRFNPEQR--SFTTIEKEKDGTP--VVSKQITTLFRDSHKRLWIGGEEGLSVFK 523 (795)
T ss_dssp SC-EEEEEECSSSCEEEEES-S--CEEEEETTTT--EEEECCBCTTCCB--CCCCCEEEEEECTTCCEEEEESSCEEEEE
T ss_pred Ce-eEEEEECCCCCEEEEec-C--ceeEEeCCCC--eEEEccccccccc--cCCceEEEEEECCCCCEEEEeCCceEEEe
Confidence 22 22344444688887543 2 24445 4432 3332211000000 00011112234458899987766788999
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCC
Q 009420 226 YVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTP 305 (535)
Q Consensus 226 p~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~ 305 (535)
++++++ . ....... ...+......++. ..+|+|++.... +-+ .|++....++.|+..
T Consensus 524 ~~~~~~-~-~~~~~~~--~~l~~~~i~~i~~-------d~~g~lWigT~~--Gl~------~~d~~~~~~~~~~~~---- 580 (795)
T 4a2l_A 524 QEGLDI-Q-KASILPV--SNVTKLFTNCIYE-------ASNGIIWVGTRE--GFY------CFNEKDKQIKRYNTT---- 580 (795)
T ss_dssp EETTEE-E-ECCCSCS--CGGGGSCEEEEEE-------CTTSCEEEEESS--CEE------EEETTTTEEEEECGG----
T ss_pred CCCCeE-E-EecCCCC--CCCCCCeeEEEEE-------CCCCCEEEEeCC--Cce------eECCCCCcEEEeCCC----
Confidence 999887 3 2210000 0000001111211 126777764321 111 122322223222211
Q ss_pred CeeeecCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCC---CCCCccccccee
Q 009420 306 TWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNP---STIPRMYHSTAV 382 (535)
Q Consensus 306 ~W~~~~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~---~~~~R~yhs~a~ 382 (535)
..++..... +.+.-.+|+|++... . | +.+|||++. +++.... ++.......+++
T Consensus 581 ----~gl~~~~i~-~i~~d~~g~lWi~t~-~-G-------------l~~~~~~~~---~~~~~~~~dGl~~~~f~~~~~~ 637 (795)
T 4a2l_A 581 ----NGLPNNVVY-GILEDSFGRLWLSTN-R-G-------------ISCFNPETE---KFRNFTESDGLQSNQFNTASYC 637 (795)
T ss_dssp ----GTCSCSCEE-EEEECTTSCEEEEET-T-E-------------EEEEETTTT---EEEEECGGGTCSCSCEEEEEEE
T ss_pred ----CCCchhheE-EEEECCCCCEEEEcC-C-c-------------eEEEcCCCC---cEEEcCCcCCCccccCccCcee
Confidence 034443332 233445789988652 1 2 468999988 8875432 332222223455
Q ss_pred ecCCCcEEEecCC
Q 009420 383 LLRDGRVLVGGSN 395 (535)
Q Consensus 383 LlpDG~V~v~GG~ 395 (535)
...||++|++|.+
T Consensus 638 ~~~~G~l~~g~~~ 650 (795)
T 4a2l_A 638 RTSVGQMYFGGIN 650 (795)
T ss_dssp ECTTSCEEEEETT
T ss_pred ECCCCeEEEecCC
Confidence 6789999998865
No 106
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.58 E-value=0.45 Score=46.42 Aligned_cols=106 Identities=10% Similarity=-0.034 Sum_probs=52.0
Q ss_pred CCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCc-EEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccC
Q 009420 122 EKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGR-IIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVEN 199 (535)
Q Consensus 122 ~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~-vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~ 199 (535)
...+.++|+. +.+.... ......-...+.-+||+ +|+.+..+ ..+.+| +.+. ......+.- .........
T Consensus 68 ~~~v~~~d~~---~~~~~~~--~~~~~~~~~~~~s~dg~~l~v~~~~~-~~v~~~d~~~~-~~~~~~~~~-~~~~~~~~~ 139 (353)
T 3vgz_A 68 GGVVYRLDPV---TLEVTQA--IHNDLKPFGATINNTTQTLWFGNTVN-SAVTAIDAKTG-EVKGRLVLD-DRKRTEEVR 139 (353)
T ss_dssp SEEEEEECTT---TCCEEEE--EEESSCCCSEEEETTTTEEEEEETTT-TEEEEEETTTC-CEEEEEESC-CCCCCSSCC
T ss_pred CccEEEEcCC---CCeEEEE--EecCCCcceEEECCCCCEEEEEecCC-CEEEEEeCCCC-eeEEEEecC-CCccccccC
Confidence 3578999987 5443221 11222233556667887 66665543 356666 4432 111112210 000000000
Q ss_pred CCcceE-EEeeCCc-EEEEe---cCeEEEEECCCCeEEEec
Q 009420 200 NLYPFV-FLNVDGF-LFIFA---NNRAILFDYVNNKVVKQY 235 (535)
Q Consensus 200 ~~yp~~-~~~~dG~-ifv~g---g~~~~~yDp~t~~W~~~~ 235 (535)
...|+. ...++|+ +|+.+ +..+.+||+++.+-...+
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~ 180 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI 180 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred CCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe
Confidence 112333 4456776 66655 245889999988766444
No 107
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.58 E-value=0.73 Score=46.25 Aligned_cols=200 Identities=15% Similarity=0.127 Sum_probs=98.1
Q ss_pred ecCC-CcEEEEcCCCCCCCeEEEEcCCCCCCCCceec--CCCCcccc--cceEEEec-CCcEEEEcCccCCeeEEE-eCC
Q 009420 106 VRPD-GVLIQTGGFNDGEKKIRSFVPCNDESCDWKEI--DGLGARRW--YATDHILP-DGRIIIIGGRRQFNYEFY-PKN 178 (535)
Q Consensus 106 ~l~d-G~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~--~~m~~~R~--y~s~~~L~-dG~vyvvGG~~~~~~E~y-P~~ 178 (535)
+.++ +..++.|+.+ ..+.+||.. +.+-... ...+.... -.+....+ ++.+++.|+.++ .+.+| .+.
T Consensus 165 ~~~~~~~~l~s~s~D---~~i~~wd~~---~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-~v~~wd~~~ 237 (380)
T 3iz6_a 165 YVPDQETRLITGSGD---QTCVLWDVT---TGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-TVRLWDLRI 237 (380)
T ss_dssp CCSSSSSCEEEECTT---SCEEEECTT---TCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-CEEEEETTT
T ss_pred EecCCCCEEEEECCC---CcEEEEEcC---CCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-eEEEEECCC
Confidence 3443 4556677653 579999987 4443221 11111111 11222222 788999888765 46677 332
Q ss_pred CCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecC--eEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeec
Q 009420 179 GAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANN--RAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLP 256 (535)
Q Consensus 179 ~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~--~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lp 256 (535)
.......+ ..... .--.+...|+|+.++.|+. .+.+||..+++-...+..-+.......+...+.+.-
T Consensus 238 ~~~~~~~~---~~h~~------~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s- 307 (380)
T 3iz6_a 238 TSRAVRTY---HGHEG------DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFS- 307 (380)
T ss_dssp TCCCCEEE---CCCSS------CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEEC-
T ss_pred CCcceEEE---CCcCC------CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEEC-
Confidence 11111111 11100 0113455679999988864 588999998765432321111000000000112221
Q ss_pred ccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeec---CCCCceeceeEEccCCeEEEEc
Q 009420 257 LKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLET---MPQPRVMGDMTLLPNGNVLLIN 333 (535)
Q Consensus 257 l~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~---m~~~R~~~~~v~lpdG~I~vvG 333 (535)
.+++++++|+.+. .+..+|........+... -...+... ...-|||+.++.|
T Consensus 308 --------~~g~~l~~g~~dg----------------~i~vwd~~~~~~~~~~~~~~~~h~~~v~~-l~~s~dg~~l~sg 362 (380)
T 3iz6_a 308 --------ISGRLLFAGYSNG----------------DCYVWDTLLAEMVLNLGTLQNSHEGRISC-LGLSSDGSALCTG 362 (380)
T ss_dssp --------SSSSEEEEECTTS----------------CEEEEETTTCCEEEEECCSCSSCCCCCCE-EEECSSSSEEEEE
T ss_pred --------CCCCEEEEEECCC----------------CEEEEECCCCceEEEEecccCCCCCceEE-EEECCCCCEEEEe
Confidence 2788888887652 234455432110011111 12223332 3456899999999
Q ss_pred CCCCCCCCcccCCCCccccEEEeCCCC
Q 009420 334 GAGKGTAGWELGRDPVLAPVVYRPDNI 360 (535)
Q Consensus 334 G~~~g~~g~~~~~~~~~~~e~YDP~t~ 360 (535)
+.+ + ++.+||....
T Consensus 363 s~D-~------------~i~iW~~~~~ 376 (380)
T 3iz6_a 363 SWD-K------------NLKIWAFSGH 376 (380)
T ss_dssp CTT-S------------CEEEEECCSS
T ss_pred eCC-C------------CEEEEecCCC
Confidence 876 2 4678887654
No 108
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.22 Score=49.25 Aligned_cols=58 Identities=5% Similarity=-0.128 Sum_probs=32.0
Q ss_pred eecC--CCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCcc
Q 009420 105 AVRP--DGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRR 168 (535)
Q Consensus 105 ~~l~--dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~ 168 (535)
...+ +|++++.|+.+ ..+.+||.. +.+-.............+++.-+||+++++|+.+
T Consensus 132 ~~~~~~~~~~l~s~s~d---g~i~~wd~~---~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 132 YGHNEVNTEYFIWADNR---GTIGFQSYE---DDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp ECCC---CCEEEEEETT---CCEEEEESS---SSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT
T ss_pred EcCCCCCCCEEEEEeCC---CcEEEEECC---CCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC
Confidence 3456 88999988864 578999987 4433222111111123344555566666666654
No 109
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.54 E-value=0.79 Score=46.18 Aligned_cols=215 Identities=13% Similarity=0.098 Sum_probs=107.5
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCC-cccccceEEEec
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLG-ARRWYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L~ 157 (535)
.+.+||..+++....-..+.....+ +..+++++++|+.+ ..+.+||.. ...- ....+. ....-.+.+..+
T Consensus 157 ~i~iwd~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d---g~i~i~d~~---~~~~-~~~~~~~~~~~v~~~~~~~ 227 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGHQARVGC--LSWNRHVLSSGSRS---GAIHHHDVR---IANH-QIGTLQGHSSEVCGLAWRS 227 (401)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEE--EEEETTEEEEEETT---SEEEEEETT---SSSC-EEEEEECCSSCEEEEEECT
T ss_pred eEEEEECcCCeEEEEecCCCCceEE--EEECCCEEEEEcCC---CCEEEEecc---cCcc-eeeEEcCCCCCeeEEEEcC
Confidence 4788998887654332222111111 12278888888864 678999986 2211 111111 111123455566
Q ss_pred CCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCC-cEEEEec----CeEEEEECCCCeEE
Q 009420 158 DGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDG-FLFIFAN----NRAILFDYVNNKVV 232 (535)
Q Consensus 158 dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG-~ifv~gg----~~~~~yDp~t~~W~ 232 (535)
||+.+++|+.++ .+.+|..... ... .. +.... ..--.....++| .+++.|+ ..+.+||..+.+..
T Consensus 228 ~~~~l~s~~~d~-~v~iwd~~~~-~~~-~~-~~~~~------~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 228 DGLQLASGGNDN-VVQIWDARSS-IPK-FT-KTNHN------AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp TSSEEEEEETTS-CEEEEETTCS-SEE-EE-ECCCS------SCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred CCCEEEEEeCCC-eEEEccCCCC-Ccc-EE-ecCCc------ceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 899999998764 4566622210 111 00 10100 001123445544 6777764 46889999887655
Q ss_pred EecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEE-cCCCCCcccccccccccccCCceEEEEecCCCCCeeee-
Q 009420 233 KQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVC-GGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE- 310 (535)
Q Consensus 233 ~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~-GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~- 310 (535)
..+. .. ... ......| +++.+++ +|... ..+..||+.. .+....
T Consensus 298 ~~~~---~~-~~v----~~~~~s~---------~~~~l~~~~g~~d---------------g~i~v~~~~~--~~~~~~~ 343 (401)
T 4aez_A 298 NTVD---AG-SQV----TSLIWSP---------HSKEIMSTHGFPD---------------NNLSIWSYSS--SGLTKQV 343 (401)
T ss_dssp EEEE---CS-SCE----EEEEECS---------SSSEEEEEECTTT---------------CEEEEEEEET--TEEEEEE
T ss_pred EEEe---CC-CcE----EEEEECC---------CCCeEEEEeecCC---------------CcEEEEecCC--ccceeEE
Confidence 4331 11 010 1112211 4444444 34321 2344555543 223322
Q ss_pred c--CCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCC
Q 009420 311 T--MPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNI 360 (535)
Q Consensus 311 ~--m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~ 360 (535)
. -...+... ...-|||+.+++||.+ | .+.+||..+.
T Consensus 344 ~~~~h~~~v~~-~~~s~dg~~l~s~~~d-g------------~i~iw~~~~~ 381 (401)
T 4aez_A 344 DIPAHDTRVLY-SALSPDGRILSTAASD-E------------NLKFWRVYDG 381 (401)
T ss_dssp EEECCSSCCCE-EEECTTSSEEEEECTT-S------------EEEEEECCC-
T ss_pred EecCCCCCEEE-EEECCCCCEEEEEeCC-C------------cEEEEECCCC
Confidence 2 22333333 3567899999998865 2 4688998776
No 110
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.49 E-value=0.12 Score=50.71 Aligned_cols=109 Identities=11% Similarity=0.065 Sum_probs=63.3
Q ss_pred eEEEEe-eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc--cccccccceecC--CCcEEEE
Q 009420 41 MHMQLL-NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ--SNVWCSSGAVRP--DGVLIQT 115 (535)
Q Consensus 41 ~~~~~~-~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~--dG~l~v~ 115 (535)
+..+.. ++|+.++.|+.+ | .+.+||..+++...+... +...-.+.++.+ +|.+++.
T Consensus 16 V~~v~~s~~g~~lasgs~D----------~---------~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s 76 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSD----------R---------SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILAS 76 (316)
T ss_dssp EEEEEECGGGCEEEEEETT----------T---------EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEE
T ss_pred EEEeeEcCCCCEEEEEeCC----------C---------eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEE
Confidence 333333 688888888754 2 578999888764333221 111111122223 4888898
Q ss_pred cCCCCCCCeEEEEcCCCCCCCCceecCCCCcc-cccceEEEecC--CcEEEEcCccCCeeEEE
Q 009420 116 GGFNDGEKKIRSFVPCNDESCDWKEIDGLGAR-RWYATDHILPD--GRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 116 GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~-R~y~s~~~L~d--G~vyvvGG~~~~~~E~y 175 (535)
|+.+ ..+++||.. +.+|.....+... ..-.+++.-++ |++++.|+.++ .+.+|
T Consensus 77 ~s~D---~~v~iWd~~---~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~-~i~lw 132 (316)
T 3bg1_A 77 CSYD---RKVIIWREE---NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG-AISLL 132 (316)
T ss_dssp EETT---SCEEEECCS---SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS-CEEEE
T ss_pred EECC---CEEEEEECC---CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC-CEEEE
Confidence 8874 679999998 6666544333211 11224444455 78888888765 45555
No 111
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.49 E-value=0.8 Score=45.70 Aligned_cols=263 Identities=13% Similarity=0.132 Sum_probs=124.3
Q ss_pred EEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCC--EEECcccc-------ccccccceecCCCcEE
Q 009420 43 MQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNE--FRPLFVQS-------NVWCSSGAVRPDGVLI 113 (535)
Q Consensus 43 ~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~--w~~~~~~~-------~~~c~~~~~l~dG~l~ 113 (535)
.-++.+++||+.... | .+.+||++|++ |+.-.... .....+...+.+|+||
T Consensus 48 ~p~v~~~~v~~~~~~-----------g---------~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (376)
T 3q7m_A 48 HPALADNVVYAADRA-----------G---------LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVY 107 (376)
T ss_dssp CCEEETTEEEEECTT-----------S---------EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEE
T ss_pred ccEEECCEEEEEcCC-----------C---------eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEE
Confidence 334468899876531 1 47889998886 54332110 1112223345578888
Q ss_pred EEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeecccccc
Q 009420 114 QTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQT 192 (535)
Q Consensus 114 v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~ 192 (535)
+.... ..+..||+.+ ++-.|+.-.. .. ...+ .++.+|+||+... + ..+-.+ +++....|...... ..
T Consensus 108 v~~~~----g~l~a~d~~t-G~~~W~~~~~--~~-~~~~-p~~~~~~v~v~~~-~-g~l~~~d~~tG~~~W~~~~~~-~~ 175 (376)
T 3q7m_A 108 IGSEK----AQVYALNTSD-GTVAWQTKVA--GE-ALSR-PVVSDGLVLIHTS-N-GQLQALNEADGAVKWTVNLDM-PS 175 (376)
T ss_dssp EEETT----SEEEEEETTT-CCEEEEEECS--SC-CCSC-CEEETTEEEEECT-T-SEEEEEETTTCCEEEEEECCC---
T ss_pred EEcCC----CEEEEEECCC-CCEEEEEeCC--Cc-eEcC-CEEECCEEEEEcC-C-CeEEEEECCCCcEEEEEeCCC-Cc
Confidence 76433 4688999872 1235764321 11 1112 2334777777543 2 233444 33322235421100 00
Q ss_pred CCccccCCCcceEEEeeCCcEEEEec-CeEEEEECCCC--eEEEecCCCCCCC---CCCCCCCCceEeecccccCCCCCC
Q 009420 193 NDPRVENNLYPFVFLNVDGFLFIFAN-NRAILFDYVNN--KVVKQYPAIPGGD---PRSYPSSGSAVLLPLKNLLAPSVA 266 (535)
Q Consensus 193 ~~~~~~~~~yp~~~~~~dG~ifv~gg-~~~~~yDp~t~--~W~~~~p~~p~~~---~R~~~~~g~~v~lpl~~~~~~~~~ 266 (535)
.. .. .....+..+|+||+... ..+..||++++ .|..... .|... .|.....+..++ .+
T Consensus 176 ~~----~~-~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~~~p~~----------~~ 239 (376)
T 3q7m_A 176 LS----LR-GESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRIS-QATGSTEIDRLSDVDTTPVV----------VN 239 (376)
T ss_dssp -------C-CCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECC-C-----------CCCCCCEE----------ET
T ss_pred ee----ec-CCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecc-cCCCCcccccccccCCCcEE----------EC
Confidence 00 00 00112334777777543 46788999875 4654321 11100 010000011111 26
Q ss_pred cEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeecCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCC
Q 009420 267 AEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGR 346 (535)
Q Consensus 267 gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~ 346 (535)
+.||+.+. + ..+.++|+.+....|+... .. ... .++.+++||+.....
T Consensus 240 ~~v~~~~~-~----------------g~l~~~d~~tG~~~w~~~~-~~---~~~-~~~~~~~l~~~~~~g---------- 287 (376)
T 3q7m_A 240 GVVFALAY-N----------------GNLTALDLRSGQIMWKREL-GS---VND-FIVDGNRIYLVDQND---------- 287 (376)
T ss_dssp TEEEEECT-T----------------SCEEEEETTTCCEEEEECC-CC---EEE-EEEETTEEEEEETTC----------
T ss_pred CEEEEEec-C----------------cEEEEEECCCCcEEeeccC-CC---CCC-ceEECCEEEEEcCCC----------
Confidence 77777542 1 1345677665445687641 11 122 344588888865321
Q ss_pred CCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecC
Q 009420 347 DPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGS 394 (535)
Q Consensus 347 ~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG 394 (535)
.+.+||+++.+ ..|+.-.. . .+...+. ++.+++||+...
T Consensus 288 ----~l~~~d~~tG~-~~w~~~~~-~-~~~~~~~--~~~~~~l~v~~~ 326 (376)
T 3q7m_A 288 ----RVMALTIDGGV-TLWTQSDL-L-HRLLTSP--VLYNGNLVVGDS 326 (376)
T ss_dssp ----CEEEEETTTCC-EEEEECTT-T-TSCCCCC--EEETTEEEEECT
T ss_pred ----eEEEEECCCCc-EEEeeccc-C-CCcccCC--EEECCEEEEEeC
Confidence 36899998762 25875311 1 1222222 234788887654
No 112
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.37 E-value=0.9 Score=44.97 Aligned_cols=281 Identities=11% Similarity=0.041 Sum_probs=134.9
Q ss_pred cccCCCceEEcccCCCcceeEEEEe-eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc---c
Q 009420 22 TDAAGGGWQLLQKSIGISSMHMQLL-NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ---S 97 (535)
Q Consensus 22 ~~~~~g~W~~l~~~~~~~~~~~~~~-~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~---~ 97 (535)
+......|+.+.. +......++.. .++++|++|- . | .+...+-.-.+|+++... .
T Consensus 20 s~d~g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~-~----------g---------~i~~s~DgG~tW~~~~~~~~~~ 78 (327)
T 2xbg_A 20 PALDYNPWEAIQL-PTTATILDMSFIDRHHGWLVGV-N----------A---------TLMETRDGGQTWEPRTLVLDHS 78 (327)
T ss_dssp CBCSSCCEEEEEC-SCSSCEEEEEESSSSCEEEEET-T----------T---------EEEEESSTTSSCEECCCCCSCC
T ss_pred cCCCCCCceEeec-CCCCcEEEEEECCCCcEEEEcC-C----------C---------eEEEeCCCCCCCeECCCCCCCC
Confidence 3344568998753 32333444443 4678888653 1 1 111111122468877532 1
Q ss_pred ccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCC-cccccceEEEecCCcEEEEcCccCCeeEEE-
Q 009420 98 NVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLG-ARRWYATDHILPDGRIIIIGGRRQFNYEFY- 175 (535)
Q Consensus 98 ~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y- 175 (535)
.....+..+. ++++|++|-. ..+.+ .. ++..+|+++.... .+-.....+...++++|++|... .+|
T Consensus 79 ~~~~~~i~~~-~~~~~~~g~~----g~i~~--S~-DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g----~v~~ 146 (327)
T 2xbg_A 79 DYRFNSVSFQ-GNEGWIVGEP----PIMLH--TT-DGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVG----AIYR 146 (327)
T ss_dssp CCEEEEEEEE-TTEEEEEEET----TEEEE--ES-STTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTC----CEEE
T ss_pred CccEEEEEec-CCeEEEEECC----CeEEE--EC-CCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCc----cEEE
Confidence 2222222333 5788887632 12322 21 1156899876321 11111244555678999887532 244
Q ss_pred eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecCe-EEEE-ECCCCeEEEecCCCCCCCCCCCCCCCceE
Q 009420 176 PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNR-AILF-DYVNNKVVKQYPAIPGGDPRSYPSSGSAV 253 (535)
Q Consensus 176 P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~-~~~y-Dp~t~~W~~~~p~~p~~~~R~~~~~g~~v 253 (535)
....+..|........ .. .-.+...++|++++.+... +.+- |....+|.. +. .+. .... ...+
T Consensus 147 S~DgG~tW~~~~~~~~-------~~-~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~-~~-~~~--~~~~---~~~~ 211 (327)
T 2xbg_A 147 TKDSGKNWQALVQEAI-------GV-MRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEP-HN-RTT--SRRL---HNMG 211 (327)
T ss_dssp ESSTTSSEEEEECSCC-------CC-EEEEEECTTSCEEEEETTSSEEEEECTTCSSCEE-EE-CCS--SSCE---EEEE
T ss_pred EcCCCCCCEEeecCCC-------cc-eEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeE-CC-CCC--CCcc---ceeE
Confidence 3322457865431100 01 1123445688888877432 2222 333578874 42 121 1221 1112
Q ss_pred eecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeeec---CCCCceeceeEEccCCeEE
Q 009420 254 LLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLET---MPQPRVMGDMTLLPNGNVL 330 (535)
Q Consensus 254 ~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~~---m~~~R~~~~~v~lpdG~I~ 330 (535)
.. .++++|+++... .. .+.+ .+...+|+... ++........+..+++++|
T Consensus 212 ~~---------~~g~~~~~~~~G--~~---------------~~s~-~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~ 264 (327)
T 2xbg_A 212 FT---------PDGRLWMIVNGG--KI---------------AFSD-PDNSENWGELLSPLRRNSVGFLDLAYRTPNEVW 264 (327)
T ss_dssp EC---------TTSCEEEEETTT--EE---------------EEEE-TTEEEEECCCBCTTSSCCSCEEEEEESSSSCEE
T ss_pred EC---------CCCCEEEEeCCc--eE---------------EEec-CCCCCeeEeccCCcccCCcceEEEEecCCCEEE
Confidence 21 267888776421 10 0110 01125788753 3343333444455689999
Q ss_pred EEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCC-CCCCcccccceeecCCCcEEEecCC
Q 009420 331 LINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNP-STIPRMYHSTAVLLRDGRVLVGGSN 395 (535)
Q Consensus 331 vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~-~~~~R~yhs~a~LlpDG~V~v~GG~ 395 (535)
++|+.. . +|- .+|.|++|+.+.. ...+-.+++++.. .+++++++|..
T Consensus 265 ~~g~~g--~--------------i~~-S~DgG~tW~~~~~~~~~~~~~~~v~~~-~~~~~~~~G~~ 312 (327)
T 2xbg_A 265 LAGGAG--A--------------LLC-SQDGGQTWQQDVDVKKVPSNFYKILFF-SPDQGFILGQK 312 (327)
T ss_dssp EEESTT--C--------------EEE-ESSTTSSCEECGGGTTSSSCCCEEEEE-ETTEEEEECST
T ss_pred EEeCCC--e--------------EEE-eCCCCcccEEcCccCCCCCCeEEEEEE-CCCceEEEcCC
Confidence 987632 1 221 1445679998763 2334444544443 67888877753
No 113
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.36 E-value=1.3 Score=48.86 Aligned_cols=152 Identities=14% Similarity=0.117 Sum_probs=84.0
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeE
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKI 125 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v 125 (535)
-++|+.++.|+.+ | .+.+||..+++....-..+.....+.++.++|+.+++|+.+ ..+
T Consensus 64 s~~~~~l~~~~~d----------g---------~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i 121 (814)
T 3mkq_A 64 IARKNWIIVGSDD----------F---------RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTV 121 (814)
T ss_dssp EGGGTEEEEEETT----------S---------EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SEE
T ss_pred eCCCCEEEEEeCC----------C---------eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC---CEE
Confidence 3577777777643 2 57899999887654332232223334566799988888763 578
Q ss_pred EEEcCCCCCCCCceecCCCCcccc-cceEEEec-CCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCc
Q 009420 126 RSFVPCNDESCDWKEIDGLGARRW-YATDHILP-DGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLY 202 (535)
Q Consensus 126 ~~ydp~~~~~~~W~~~~~m~~~R~-y~s~~~L~-dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~y 202 (535)
.+||.. ++ |.....+..... -.+++..+ |++.+++|+.++ .+.+| ..... ....+.. ... ...
T Consensus 122 ~vw~~~---~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg-~v~vwd~~~~~-~~~~~~~--~~~------~~v 187 (814)
T 3mkq_A 122 KLWNWE---NN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR-TVKVWSLGQST-PNFTLTT--GQE------RGV 187 (814)
T ss_dssp EEEEGG---GT-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS-EEEEEETTCSS-CSEEEEC--CCT------TCC
T ss_pred EEEECC---CC-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC-eEEEEECCCCc-ceeEEec--CCC------CCE
Confidence 999986 33 333222221111 12334444 678888887764 45666 32211 1111110 000 001
Q ss_pred ceEEEee--CCcEEEEec--CeEEEEECCCCeEEE
Q 009420 203 PFVFLNV--DGFLFIFAN--NRAILFDYVNNKVVK 233 (535)
Q Consensus 203 p~~~~~~--dG~ifv~gg--~~~~~yDp~t~~W~~ 233 (535)
......+ +|++++.|+ ..+.+||..+++-..
T Consensus 188 ~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 222 (814)
T 3mkq_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVA 222 (814)
T ss_dssp CEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEE
T ss_pred EEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEE
Confidence 1233445 888888876 467899998877543
No 114
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.33 E-value=0.64 Score=45.29 Aligned_cols=101 Identities=13% Similarity=0.070 Sum_probs=60.4
Q ss_pred CeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecC-CCcEEEEcCCCCCCCeEEE
Q 009420 49 DRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRP-DGVLIQTGGFNDGEKKIRS 127 (535)
Q Consensus 49 gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ 127 (535)
|++++.|+.+ | .+.+||..+++-...-..+.....+..+.+ +++++++|+.+ ..+.+
T Consensus 85 ~~~l~~~~~d----------g---------~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d---g~i~i 142 (366)
T 3k26_A 85 HPLLAVAGSR----------G---------IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD---HALRL 142 (366)
T ss_dssp CEEEEEEETT----------C---------EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT---SCEEE
T ss_pred CCEEEEecCC----------C---------EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC---CeEEE
Confidence 6788887743 2 578999988765332222333333344566 89999999873 57899
Q ss_pred EcCCCCCCCCce-ecCCCC-cccccceEEEecCCcEEEEcCccCCeeEEE
Q 009420 128 FVPCNDESCDWK-EIDGLG-ARRWYATDHILPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 128 ydp~~~~~~~W~-~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 175 (535)
||.. +.+-. .+..+. ....-.+++..++|+.+++|+.++ .+.+|
T Consensus 143 wd~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~i~ 188 (366)
T 3k26_A 143 WNIQ---TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH-SLKLW 188 (366)
T ss_dssp EETT---TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS-CEEEE
T ss_pred EEee---cCeEEEEecccccccCceeEEEECCCCCEEEEecCCC-CEEEE
Confidence 9987 44322 221111 222223455557899999888764 34555
No 115
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.30 E-value=0.33 Score=46.97 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=57.0
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCccccc-ceEEEec--CCcEEEEcCccCCeeEEE-eCCCC
Q 009420 105 AVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWY-ATDHILP--DGRIIIIGGRRQFNYEFY-PKNGA 180 (535)
Q Consensus 105 ~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y-~s~~~L~--dG~vyvvGG~~~~~~E~y-P~~~~ 180 (535)
++-+||+.++.|+.+ ..+++||.. ..+...+..+...... .+++..+ +|++++.|+.++ ++.+| ....
T Consensus 16 ~~s~~g~~las~s~D---~~v~iw~~~---~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~-~v~iWd~~~~- 87 (297)
T 2pm7_B 16 VMDYYGKRMATCSSD---KTIKIFEVE---GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-KVMIWKEENG- 87 (297)
T ss_dssp EECTTSSEEEEEETT---SCEEEEEBC---SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT-EEEEEEBSSS-
T ss_pred EECCCCCEEEEEeCC---CEEEEEecC---CCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC-EEEEEEcCCC-
Confidence 345799999999874 579999986 4333222222211111 1222222 378888888764 56677 3321
Q ss_pred CCeeeeccccccCCccccCCCcceEEEeeC--CcEEEEec--CeEEEEECCCC
Q 009420 181 PNVYSLPFLVQTNDPRVENNLYPFVFLNVD--GFLFIFAN--NRAILFDYVNN 229 (535)
Q Consensus 181 ~~w~~~~~l~~~~~~~~~~~~yp~~~~~~d--G~ifv~gg--~~~~~yDp~t~ 229 (535)
.+.....+..... .--.+...|+ |++++.|+ ..+.+||..++
T Consensus 88 -~~~~~~~~~~h~~------~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 88 -RWSQIAVHAVHSA------SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp -CBCCCEEECCCSS------CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred -ceEEEEEeecCCC------ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 2221111111000 0011233444 77777775 45778988765
No 116
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.24 E-value=0.18 Score=49.33 Aligned_cols=229 Identities=9% Similarity=0.096 Sum_probs=113.4
Q ss_pred ceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCc-ccccceEEEecCCcEEEEcCccCCeeEEEeCCCCCC
Q 009420 104 GAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGA-RRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPN 182 (535)
Q Consensus 104 ~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~-~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~ 182 (535)
.++.+||+++++|+.+ ..+.+||.. +.+-. ..+.. ...-.+++..+|++.+++|+.++ .+.+|..... +
T Consensus 38 ~~~s~~~~~l~~~~~d---g~i~vwd~~---~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~-~ 107 (369)
T 3zwl_B 38 VKYNKEGDLLFSCSKD---SSASVWYSL---NGERL--GTLDGHTGTIWSIDVDCFTKYCVTGSADY-SIKLWDVSNG-Q 107 (369)
T ss_dssp EEECTTSCEEEEEESS---SCEEEEETT---TCCEE--EEECCCSSCEEEEEECTTSSEEEEEETTT-EEEEEETTTC-C
T ss_pred EEEcCCCCEEEEEeCC---CEEEEEeCC---Cchhh--hhhhhcCCcEEEEEEcCCCCEEEEEeCCC-eEEEEECCCC-c
Confidence 4456789999998763 468999976 43321 12221 11122445556899999888764 4566622211 1
Q ss_pred ee-eeccccccCCccccCCCcceEEEeeCCcEEEEec-------CeEEEEECCCCe----EEEecCCCCCCCCCCCCCCC
Q 009420 183 VY-SLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN-------NRAILFDYVNNK----VVKQYPAIPGGDPRSYPSSG 250 (535)
Q Consensus 183 w~-~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-------~~~~~yDp~t~~----W~~~~p~~p~~~~R~~~~~g 250 (535)
.. ... .. ..--.....++|+.++.+. ..+.+||..+.. +.. ...-+. .+.....+
T Consensus 108 ~~~~~~---~~-------~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~-~~~~~~--~~~~~~~~ 174 (369)
T 3zwl_B 108 CVATWK---SP-------VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK-VSEEPI--HKIITHEG 174 (369)
T ss_dssp EEEEEE---CS-------SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE-ECSSCS--EEEECCTT
T ss_pred EEEEee---cC-------CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc-ccccee--eeccCCcC
Confidence 11 111 00 0011234567888777764 356778775432 110 100000 00000000
Q ss_pred --ceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEccCC
Q 009420 251 --SAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLPNG 327 (535)
Q Consensus 251 --~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lpdG 327 (535)
....+... .+++.+++|+.+ ..+..||+... .+-... ........ +....|||
T Consensus 175 ~~~~~~~~~~------~~~~~l~~~~~d----------------g~i~i~d~~~~-~~~~~~~~~~~~~v~-~~~~~~~~ 230 (369)
T 3zwl_B 175 LDAATVAGWS------TKGKYIIAGHKD----------------GKISKYDVSNN-YEYVDSIDLHEKSIS-DMQFSPDL 230 (369)
T ss_dssp CCCEEEEEEC------GGGCEEEEEETT----------------SEEEEEETTTT-TEEEEEEECCSSCEE-EEEECTTS
T ss_pred ccceeEEEEc------CCCCEEEEEcCC----------------CEEEEEECCCC-cEeEEEEecCCCcee-EEEECCCC
Confidence 11111111 267778877654 23445665421 111111 22222222 34566899
Q ss_pred eEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCCCc
Q 009420 328 NVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHA 398 (535)
Q Consensus 328 ~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~~~ 398 (535)
+.+++++.+ + .+.+||..+. +....-.. .. ......+.||++.+++|+....
T Consensus 231 ~~l~~~~~d-~------------~i~v~d~~~~---~~~~~~~~--~~-~~~~~~~~~~~~~l~~~~~~~~ 282 (369)
T 3zwl_B 231 TYFITSSRD-T------------NSFLVDVSTL---QVLKKYET--DC-PLNTAVITPLKEFIILGGGQEA 282 (369)
T ss_dssp SEEEEEETT-S------------EEEEEETTTC---CEEEEEEC--SS-CEEEEEECSSSSEEEEEECCC-
T ss_pred CEEEEecCC-c------------eEEEEECCCC---ceeeeecC--CC-CceeEEecCCCceEEEeecCCC
Confidence 999988754 2 5789998776 43221111 11 1124556799999999986543
No 117
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.20 E-value=0.41 Score=48.83 Aligned_cols=112 Identities=10% Similarity=0.084 Sum_probs=63.1
Q ss_pred ceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCc-ccccceEEEecCCcEEEEcCccCCeeEEEeCCCCCC
Q 009420 104 GAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGA-RRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPN 182 (535)
Q Consensus 104 ~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~-~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~ 182 (535)
.++-+++.+++.|+.+ ..+.+||.. +.+... .+.. ...-.+++.-++|++++.|+.++ ++.+|..... .
T Consensus 114 ~~~~p~~~~l~s~s~D---g~i~vwd~~---~~~~~~--~l~~h~~~V~~v~~~~~~~~l~sgs~D~-~i~iwd~~~~-~ 183 (410)
T 1vyh_C 114 VIFHPVFSVMVSASED---ATIKVWDYE---TGDFER--TLKGHTDSVQDISFDHSGKLLASCSADM-TIKLWDFQGF-E 183 (410)
T ss_dssp EEECSSSSEEEEEESS---SCEEEEETT---TCCCCE--EECCCSSCEEEEEECTTSSEEEEEETTS-CCCEEETTSS-C
T ss_pred EEEcCCCCEEEEEeCC---CeEEEEECC---CCcEEE--EEeccCCcEEEEEEcCCCCEEEEEeCCC-eEEEEeCCCC-c
Confidence 3456789999999874 579999987 443321 1111 11122445557899999988764 3555522110 1
Q ss_pred eeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEE
Q 009420 183 VYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVK 233 (535)
Q Consensus 183 w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~ 233 (535)
....+.... ..--.+...|+|+.++.|+ ..+.+||..++.-.+
T Consensus 184 --~~~~~~~h~------~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~ 228 (410)
T 1vyh_C 184 --CIRTMHGHD------HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228 (410)
T ss_dssp --EEECCCCCS------SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred --eeEEEcCCC------CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 111111110 0011234567888888775 467899998876543
No 118
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.15 E-value=0.18 Score=50.69 Aligned_cols=119 Identities=10% Similarity=0.001 Sum_probs=61.9
Q ss_pred cceecCC-CcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCc-----ccccceEEEecCC-cEEEEcCccC--CeeE
Q 009420 103 SGAVRPD-GVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGA-----RRWYATDHILPDG-RIIIIGGRRQ--FNYE 173 (535)
Q Consensus 103 ~~~~l~d-G~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~-----~R~y~s~~~L~dG-~vyvvGG~~~--~~~E 173 (535)
+.++.++ +.++++|+.+ ..+.+||.. +.+....-.... ...-.+++..++| +++++|+.++ ..+.
T Consensus 170 ~~~~~~~~~~~l~~~~~d---g~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSS---NFASIWDLK---AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL 243 (416)
T ss_dssp EEEECSSCTTEEEEESSS---SCEEEEETT---TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred EEEeCCCCCcEEEEEcCC---CCEEEEECC---CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence 3445566 7899998763 568999987 443221111111 2223345556666 6788877654 1456
Q ss_pred EEeCCCCCCeeeecccc-ccCCccccCCCcceEEEee-CCcEEEEec--CeEEEEECCCCeEEEec
Q 009420 174 FYPKNGAPNVYSLPFLV-QTNDPRVENNLYPFVFLNV-DGFLFIFAN--NRAILFDYVNNKVVKQY 235 (535)
Q Consensus 174 ~yP~~~~~~w~~~~~l~-~~~~~~~~~~~yp~~~~~~-dG~ifv~gg--~~~~~yDp~t~~W~~~~ 235 (535)
+|........ ...+. ... ..--.+...+ ++++++.|+ ..+.+||..+.+-...+
T Consensus 244 ~~d~~~~~~~--~~~~~~~~~------~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 244 IWDLRNANTP--LQTLNQGHQ------KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp EEETTSTTSC--SBCCCSCCS------SCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE
T ss_pred EEeCCCCCCC--cEEeecCcc------CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee
Confidence 6622211010 01111 000 0011223345 788888876 46889999887654333
No 119
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.14 E-value=1.1 Score=43.99 Aligned_cols=50 Identities=20% Similarity=0.145 Sum_probs=32.9
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 131 (535)
.+.+||..+++....-..+.....+.++.+||+.++.||.+ ..+.+||..
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d---~~i~~wd~~ 148 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE---REIKLWNIL 148 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT---SCEEEEESS
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC---CEEEEEecc
Confidence 57899999886543222222222234466799999998864 578999875
No 120
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.13 E-value=0.19 Score=50.07 Aligned_cols=64 Identities=16% Similarity=0.224 Sum_probs=38.6
Q ss_pred ee-CCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcc-------------ccccccccceecC-CC
Q 009420 46 LN-NDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFV-------------QSNVWCSSGAVRP-DG 110 (535)
Q Consensus 46 ~~-~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~-------------~~~~~c~~~~~l~-dG 110 (535)
-+ +++.++.|+.+ | .+.+||..+.+...... .+.....+..+.+ ++
T Consensus 52 s~~~~~~l~~~~~d----------g---------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 112 (408)
T 4a11_B 52 EPVEGRYMLSGGSD----------G---------VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT 112 (408)
T ss_dssp CTTTCCEEEEEETT----------S---------CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT
T ss_pred ecCCCCEEEEEcCC----------C---------eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC
Confidence 36 88988888754 2 47889988765432211 0111222233455 67
Q ss_pred cEEEEcCCCCCCCeEEEEcCC
Q 009420 111 VLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 111 ~l~v~GG~~~g~~~v~~ydp~ 131 (535)
.++++|+.+ ..+.+||..
T Consensus 113 ~~l~s~~~d---~~i~iwd~~ 130 (408)
T 4a11_B 113 GMFTSSSFD---KTLKVWDTN 130 (408)
T ss_dssp TCEEEEETT---SEEEEEETT
T ss_pred cEEEEEeCC---CeEEEeeCC
Confidence 788887763 578889876
No 121
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.05 E-value=2 Score=45.85 Aligned_cols=279 Identities=10% Similarity=0.047 Sum_probs=134.9
Q ss_pred eeEEEEC--CCCCEEE-CccccccccccceecC----CCcEEEEcCCCCCCCeEEEEcCCCCCCCCcee-cC--CC----
Q 009420 79 HSVEYSV--LTNEFRP-LFVQSNVWCSSGAVRP----DGVLIQTGGFNDGEKKIRSFVPCNDESCDWKE-ID--GL---- 144 (535)
Q Consensus 79 ~~~~yDp--~t~~w~~-~~~~~~~~c~~~~~l~----dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~-~~--~m---- 144 (535)
.+.+||+ .+.+... +.. ...-.+.++-+ ||+.+.++.+.+ .++.++|.. +.+-.. ++ .+
T Consensus 201 ~V~v~D~~~~t~~~~~~i~~--g~~p~~va~sp~~~~dg~~l~v~~~~~--~~v~v~D~~---t~~~~~~i~~~g~~~~~ 273 (543)
T 1nir_A 201 RIDMIDLWAKEPTKVAEIKI--GIEARSVESSKFKGYEDRYTIAGAYWP--PQFAIMDGE---TLEPKQIVSTRGMTVDT 273 (543)
T ss_dssp EEEEEETTSSSCEEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEES--SEEEEEETT---TCCEEEEEECCEECSSS
T ss_pred eEEEEECcCCCCcEEEEEec--CCCcceEEeCCCcCCCCCEEEEEEccC--CeEEEEecc---ccccceeecccCcccCc
Confidence 6889999 6665322 221 11222344567 898877776432 678899976 443221 11 11
Q ss_pred ----CcccccceEEEecCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcce-EEEeeCCcEEEEec-
Q 009420 145 ----GARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPF-VFLNVDGFLFIFAN- 218 (535)
Q Consensus 145 ----~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~-~~~~~dG~ifv~gg- 218 (535)
+.+| -.+.+.-++++.+++.......+.++.......-. ...+ +...+|+ ...-|||+.++.++
T Consensus 274 ~~~~~~~~-v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i--------~~~~~~~~~~~spdg~~l~va~~ 343 (543)
T 1nir_A 274 QTYHPEPR-VAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-VTSI--------GAAPFLHDGGWDSSHRYFMTAAN 343 (543)
T ss_dssp CCEESCCC-EEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-EEEE--------ECCSSCCCEEECTTSCEEEEEEG
T ss_pred cccccCCc-eEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce-eEEe--------ccCcCccCceECCCCCEEEEEec
Confidence 1112 22344445566555554444445555222111100 0000 0112343 34567998554432
Q ss_pred --CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceE
Q 009420 219 --NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCA 296 (535)
Q Consensus 219 --~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e 296 (535)
+.+.++|.++++-...++ .. ..-++..+....-| ..+++|+.+... .+++.
T Consensus 344 ~~~~v~v~D~~tg~l~~~i~---~g-~~ph~g~g~~~~~p--------~~g~~~~s~~~~---------------d~~V~ 396 (543)
T 1nir_A 344 NSNKVAVIDSKDRRLSALVD---VG-KTPHPGRGANFVHP--------KYGPVWSTSHLG---------------DGSIS 396 (543)
T ss_dssp GGTEEEEEETTTTEEEEEEE---CS-SSBCCTTCEEEEET--------TTEEEEEEEBSS---------------SSEEE
T ss_pred CCCeEEEEECCCCeEEEeec---cC-CCCCCCCCcccCCC--------CCccEEEeccCC---------------CceEE
Confidence 578899999998664342 11 11111113332222 247888886532 12455
Q ss_pred EEEecCC---CCCeeee-cCCCCc-eeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceee----
Q 009420 297 RIKITDP---TPTWVLE-TMPQPR-VMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDL---- 367 (535)
Q Consensus 297 ~~d~~~~---~~~W~~~-~m~~~R-~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~---- 367 (535)
.||.... ...|+.. .++..- .......-|||+.+.++...... .+.-.++.+||.++.... .+.
T Consensus 397 v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~------~~~~~~v~v~d~~~~~~~-~~~~~v~ 469 (543)
T 1nir_A 397 LIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPD------ARISQSVAVFDLKNLDAK-YQVLPIA 469 (543)
T ss_dssp EEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSS------HHHHTCEEEEETTCTTSC-CEEECHH
T ss_pred EEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCC------cccCceEEEEECCCCCCC-eEEeech
Confidence 6665431 1238765 433221 11223456899887776531000 000136899999887321 122
Q ss_pred ----cCCCCCCcccccceeecCCCcEEEecC-CCCccccccCCCCCceeeEEEEcCCCC
Q 009420 368 ----QNPSTIPRMYHSTAVLLRDGRVLVGGS-NPHAYYNFTGVLFPTELSLEAFSPYYL 421 (535)
Q Consensus 368 ----~~~~~~~R~yhs~a~LlpDG~V~v~GG-~~~~~~~~~~~~~~~~~~vE~y~Ppyl 421 (535)
+.. ...|..| ..+-+||+-+.+.- +... .+..|.+|+...+
T Consensus 470 ~~~~~~~-~~~~~~~--~~~~~~g~~~~~s~~~~~~----------~~~~i~v~D~~t~ 515 (543)
T 1nir_A 470 EWADLGE-GAKRVVQ--PEYNKRGDEVWFSVWNGKN----------DSSALVVVDDKTL 515 (543)
T ss_dssp HHHCCCS-SCCEEEE--EEECSSSSEEEEEEECCTT----------SCCEEEEEETTTT
T ss_pred hhcccCC-CCCceEe--ccCCCCCCEEEEEeecCCC----------CCCeEEEEECCCc
Confidence 111 1345555 24568997555431 1100 1236778887775
No 122
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.03 E-value=1.2 Score=42.93 Aligned_cols=137 Identities=18% Similarity=0.248 Sum_probs=75.9
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCccc-ccceEEEec
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARR-WYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R-~y~s~~~L~ 157 (535)
.+.+||..+++-...-..+.....+....+++.+++.|+.+ ..+.+||.. +.+-. ..+.... .-.+.+.-+
T Consensus 88 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~i~iwd~~---~~~~~--~~~~~~~~~v~~~~~~~ 159 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD---ESVRIWDVK---TGKCL--KTLPAHSDPVSAVHFNR 159 (312)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEETT---TCCEE--EEECCCSSCEEEEEECT
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC---CcEEEEECC---CCEEE--EEecCCCCcEEEEEEcC
Confidence 57899998876433222222222233456789999999874 579999987 44321 1121111 122344556
Q ss_pred CCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEE
Q 009420 158 DGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVK 233 (535)
Q Consensus 158 dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~ 233 (535)
+|+.+++|+.++ .+.+| .... +... .+.... . ...-.....++|+.++.++ ..+.+||..+.+-..
T Consensus 160 ~~~~l~~~~~d~-~i~~wd~~~~--~~~~-~~~~~~-~-----~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 160 DGSLIVSSSYDG-LCRIWDTASG--QCLK-TLIDDD-N-----PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp TSSEEEEEETTS-CEEEEETTTC--CEEE-EECCSS-C-----CCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEE
T ss_pred CCCEEEEEeCCC-cEEEEECCCC--ceee-EEeccC-C-----CceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 899999988765 45666 3221 1110 000000 0 0011234557888888775 468899998887543
No 123
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.00 E-value=0.078 Score=52.32 Aligned_cols=57 Identities=9% Similarity=0.073 Sum_probs=33.9
Q ss_pred CCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCC---CcEEEecCCC
Q 009420 326 NGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRD---GRVLVGGSNP 396 (535)
Q Consensus 326 dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpD---G~V~v~GG~~ 396 (535)
|++.+++|+.+ + .+.+||..++. ..|.....+......-......|| ++++++|+..
T Consensus 171 ~~~~l~~~~~d-g------------~i~i~d~~~~~-~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 171 ESRKFVTGGAD-N------------LVKIWKYNSDA-QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp TTCEEEEEETT-S------------CEEEEEEETTT-TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred CCCEEEEEeCC-C------------eEEEEEecCCC-cceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC
Confidence 78999988765 2 46889886651 134433222211111123456788 8999999864
No 124
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.91 E-value=0.29 Score=47.84 Aligned_cols=135 Identities=12% Similarity=0.056 Sum_probs=69.8
Q ss_pred eeEEEECCCCCE-EECccc----cccccccceecCC----CcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCC-ccc
Q 009420 79 HSVEYSVLTNEF-RPLFVQ----SNVWCSSGAVRPD----GVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLG-ARR 148 (535)
Q Consensus 79 ~~~~yDp~t~~w-~~~~~~----~~~~c~~~~~l~d----G~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~-~~R 148 (535)
.+.+||..+++. ..+... +.....+.+..++ |+++++|+.+ ..+.+||.. +.+- +..+. ...
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d---g~i~v~d~~---~~~~--~~~~~~~~~ 116 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR---GIIRIINPI---TMQC--IKHYVGHGN 116 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT---CEEEEECTT---TCCE--EEEEESCCS
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC---CEEEEEEch---hceE--eeeecCCCC
Confidence 467888876553 222211 1122222334455 7889998864 579999987 4332 11121 111
Q ss_pred ccceEEEec-CCcEEEEcCccCCeeEEE-eCCCCCCee-eeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEE
Q 009420 149 WYATDHILP-DGRIIIIGGRRQFNYEFY-PKNGAPNVY-SLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAIL 223 (535)
Q Consensus 149 ~y~s~~~L~-dG~vyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~ 223 (535)
.-.+++..+ +++++++|+.++ .+.+| .... +.. .+..+..... .--.+...++|+.++.|+ ..+.+
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~--~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~dg~i~i 187 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDH-ALRLWNIQTD--TLVAIFGGVEGHRD------EVLSADYDLLGEKIMSCGMDHSLKL 187 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTS-CEEEEETTTT--EEEEEECSTTSCSS------CEEEEEECTTSSEEEEEETTSCEEE
T ss_pred cEEEEEECCCCCCEEEEEeCCC-eEEEEEeecC--eEEEEecccccccC------ceeEEEECCCCCEEEEecCCCCEEE
Confidence 122444555 789999888764 45666 3221 111 1100011100 011233446888888775 46888
Q ss_pred EECCCCe
Q 009420 224 FDYVNNK 230 (535)
Q Consensus 224 yDp~t~~ 230 (535)
||..+.+
T Consensus 188 ~d~~~~~ 194 (366)
T 3k26_A 188 WRINSKR 194 (366)
T ss_dssp EESCSHH
T ss_pred EECCCCc
Confidence 9988653
No 125
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.85 E-value=0.8 Score=43.73 Aligned_cols=62 Identities=13% Similarity=0.057 Sum_probs=37.2
Q ss_pred ccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEc
Q 009420 98 NVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIG 165 (535)
Q Consensus 98 ~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvG 165 (535)
..|..+-.+ .+++||+..|.. +.++++.+|+. +.+=..--+++..-...+.+.. +++||++.
T Consensus 20 ~~ftqGL~~-~~~~LyestG~~-g~S~v~~vD~~---tgkv~~~~~l~~~~fgeGi~~~-~~~ly~lt 81 (243)
T 3mbr_X 20 TAFTEGLFY-LRGHLYESTGET-GRSSVRKVDLE---TGRILQRAEVPPPYFGAGIVAW-RDRLIQLT 81 (243)
T ss_dssp TCCEEEEEE-ETTEEEEEECCT-TSCEEEEEETT---TCCEEEEEECCTTCCEEEEEEE-TTEEEEEE
T ss_pred ccccccEEE-ECCEEEEECCCC-CCceEEEEECC---CCCEEEEEeCCCCcceeEEEEe-CCEEEEEE
Confidence 445555444 478999998873 55789999998 6654333233332222333443 67777763
No 126
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.83 E-value=1.3 Score=42.61 Aligned_cols=16 Identities=25% Similarity=0.364 Sum_probs=12.6
Q ss_pred eeecCCCcEEEecCCC
Q 009420 381 AVLLRDGRVLVGGSNP 396 (535)
Q Consensus 381 a~LlpDG~V~v~GG~~ 396 (535)
....|||+.+++||.+
T Consensus 312 l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 312 LAWSADGQTLFAGYTD 327 (340)
T ss_dssp EEECTTSSEEEEEETT
T ss_pred EEECCCCCEEEEEeCC
Confidence 3457999999999864
No 127
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.83 E-value=1.4 Score=42.45 Aligned_cols=102 Identities=10% Similarity=-0.014 Sum_probs=59.7
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCC----EEECccccccccccceecCCCc-EEEEcCCCC
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNE----FRPLFVQSNVWCSSGAVRPDGV-LIQTGGFND 120 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~----w~~~~~~~~~~c~~~~~l~dG~-l~v~GG~~~ 120 (535)
-++++.++.++.+ | .+.+||..+++ ...+. .+.....+.++.++|+ ++++|+.+
T Consensus 20 s~~~~~l~~~~~d----------~---------~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d- 78 (342)
T 1yfq_A 20 IPSKSLLLITSWD----------G---------SLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQ- 78 (342)
T ss_dssp EGGGTEEEEEETT----------S---------EEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETT-
T ss_pred cCCCCEEEEEcCC----------C---------eEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCC-
Confidence 4688888888643 2 47889888776 33222 2222223344567899 88888863
Q ss_pred CCCeEEEEcC-CCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE
Q 009420 121 GEKKIRSFVP-CNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 121 g~~~v~~ydp-~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 175 (535)
..+.+||. . +.+...+........-.+.+..+ ++.++.|+.++ .+.+|
T Consensus 79 --g~i~~wd~~~---~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~-~i~iw 127 (342)
T 1yfq_A 79 --GEILKVDLIG---SPSFQALTNNEANLGICRICKYG-DDKLIAASWDG-LIEVI 127 (342)
T ss_dssp --SCEEEECSSS---SSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTS-EEEEE
T ss_pred --CeEEEEEecc---CCceEeccccCCCCceEEEEeCC-CCEEEEEcCCC-eEEEE
Confidence 57999998 7 55444333211112122444455 78888887654 45555
No 128
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.79 E-value=0.37 Score=46.61 Aligned_cols=61 Identities=20% Similarity=0.187 Sum_probs=35.5
Q ss_pred ccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEE
Q 009420 98 NVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIII 164 (535)
Q Consensus 98 ~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvv 164 (535)
..|..+-.+. |++||+..|.. +.++++.+|+. +.+=..--++...-+..+.+.. +++||++
T Consensus 42 ~~ftqGL~~~-~~~LyestG~~-g~S~v~~vD~~---Tgkv~~~~~l~~~~FgeGit~~-g~~ly~l 102 (262)
T 3nol_A 42 KAFTEGFFYR-NGYFYESTGLN-GRSSIRKVDIE---SGKTLQQIELGKRYFGEGISDW-KDKIVGL 102 (262)
T ss_dssp TCEEEEEEEE-TTEEEEEEEET-TEEEEEEECTT---TCCEEEEEECCTTCCEEEEEEE-TTEEEEE
T ss_pred CcccceEEEE-CCEEEEECCCC-CCceEEEEECC---CCcEEEEEecCCccceeEEEEe-CCEEEEE
Confidence 4555665554 89999998863 45689999998 6653322233221111223333 5677765
No 129
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.77 E-value=1 Score=44.75 Aligned_cols=158 Identities=11% Similarity=0.050 Sum_probs=79.5
Q ss_pred eEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCC------EEECcccc----ccccccceec----CCCcE-EE
Q 009420 50 RVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNE------FRPLFVQS----NVWCSSGAVR----PDGVL-IQ 114 (535)
Q Consensus 50 kv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~------w~~~~~~~----~~~c~~~~~l----~dG~l-~v 114 (535)
+.++.++.+ | .+.+||..+++ +..+.... .....+..+. ++++. ++
T Consensus 82 ~~l~s~~~d----------g---------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 142 (397)
T 1sq9_A 82 CLVATTSFS----------G---------DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLV 142 (397)
T ss_dssp EEEEEEETT----------S---------CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEE
T ss_pred cEEEEEcCC----------C---------CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEE
Confidence 888888753 2 47889988877 66654331 1222334456 78998 88
Q ss_pred EcCCCCCCCeEEEEcCCC------CCCCCceecCCCC--------cccccceEEEecCCcEEEEcCccCCeeEEEeCCCC
Q 009420 115 TGGFNDGEKKIRSFVPCN------DESCDWKEIDGLG--------ARRWYATDHILPDGRIIIIGGRRQFNYEFYPKNGA 180 (535)
Q Consensus 115 ~GG~~~g~~~v~~ydp~~------~~~~~W~~~~~m~--------~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~ 180 (535)
+|+.+ ..+.+||... ...-.|.....+. ....-.+++..++| ++++|+.++ .+.+|.....
T Consensus 143 ~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-~i~i~d~~~~ 217 (397)
T 1sq9_A 143 ATDVK---GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-TVQISELSTL 217 (397)
T ss_dssp EEETT---SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-EEEEEETTTT
T ss_pred EEeCC---CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-cEEEEECCCC
Confidence 88763 5688888761 0011122111221 12223455666778 777777654 4566632211
Q ss_pred CCee-eeccccccCCccccCCCcceEEEeeCCcEEEEecC-----eEEEEECCCCeEEEec
Q 009420 181 PNVY-SLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANN-----RAILFDYVNNKVVKQY 235 (535)
Q Consensus 181 ~~w~-~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~-----~~~~yDp~t~~W~~~~ 235 (535)
+.. .+........ ....--.....++|++++.++. .+.+||..+.+-...+
T Consensus 218 -~~~~~~~~~~~h~~---~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 218 -RPLYNFESQHSMIN---NSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp -EEEEEEECCC---C---CCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred -ceeEEEeccccccc---cCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 111 1111000000 0000112344578998888753 4778999877644333
No 130
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.72 E-value=0.059 Score=53.72 Aligned_cols=59 Identities=10% Similarity=0.123 Sum_probs=35.7
Q ss_pred ceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCccc-ccceEEEecCCcEEEEcCcc
Q 009420 104 GAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARR-WYATDHILPDGRIIIIGGRR 168 (535)
Q Consensus 104 ~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R-~y~s~~~L~dG~vyvvGG~~ 168 (535)
.++-+||+++++|+.+ ..+.+||.. +..|.....+.... .-.+++..+||+.++.|+.+
T Consensus 17 ~~~s~~g~~l~~~~~d---~~i~iw~~~---~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d 76 (377)
T 3dwl_C 17 HAFNSQRTEFVTTTAT---NQVELYEQD---GNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD 76 (377)
T ss_dssp CEECSSSSEEECCCSS---SCBCEEEEE---TTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT
T ss_pred EEECCCCCEEEEecCC---CEEEEEEcc---CCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC
Confidence 3455799999998763 568889987 66666665554221 11233344456666655543
No 131
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.71 E-value=1.1 Score=45.67 Aligned_cols=134 Identities=11% Similarity=0.102 Sum_probs=68.9
Q ss_pred eeEEEECCCCCEEECccc--cccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCccc-ccceEEE
Q 009420 79 HSVEYSVLTNEFRPLFVQ--SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARR-WYATDHI 155 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R-~y~s~~~ 155 (535)
.+.+||.+++....+... ....+.+..+.++|+++++|+.+ ..+.+||.. ... +..+.... .-.+++.
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~i~~wd~~---~~~---~~~~~~h~~~v~~v~~ 258 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV---GNVILLNMD---GKE---LWNLRMHKKKVTHVAL 258 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS---SBEEEEESS---SCB---CCCSBCCSSCEEEEEE
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC---CcEeeeccC---cce---eEEEecccceEEeeee
Confidence 467888887766554322 22223334456799999999874 578999976 322 22222111 1223344
Q ss_pred ecCCc-EEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcce--EEEeeCCcEEEEec--CeEEEEECCCCe
Q 009420 156 LPDGR-IIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPF--VFLNVDGFLFIFAN--NRAILFDYVNNK 230 (535)
Q Consensus 156 L~dG~-vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~--~~~~~dG~ifv~gg--~~~~~yDp~t~~ 230 (535)
-++++ +++.|+.++ .+.+|.......-..+....... .+. +...+||+.++.|+ ..+.+||..+..
T Consensus 259 ~p~~~~~~~s~s~d~-~v~iwd~~~~~~~~~~~~~~~h~--------~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 259 NPCCDWFLATASVDQ-TVKIWDLRQVRGKASFLYSLPHR--------HPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp CTTCSSEEEEEETTS-BCCEEETTTCCSSSCCSBCCBCS--------SCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred cCCCceEEEEecCcc-eeeEEecccccccceEEEeeecc--------ccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 44565 666776653 45566221100000000000000 111 12246888888776 357889987654
No 132
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.66 E-value=1.8 Score=43.55 Aligned_cols=71 Identities=7% Similarity=0.080 Sum_probs=37.2
Q ss_pred eEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeec----cccccCCccccCCCcceEEEeeCC-cEEEEec--CeEEE
Q 009420 152 TDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLP----FLVQTNDPRVENNLYPFVFLNVDG-FLFIFAN--NRAIL 223 (535)
Q Consensus 152 s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~----~l~~~~~~~~~~~~yp~~~~~~dG-~ifv~gg--~~~~~ 223 (535)
+++..+||++++.| . ...+.+| ..........+. .+.... ..--.+...|+| ++++.|+ ..+.+
T Consensus 182 ~~~~~~~~~~l~s~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 182 SISINSDYETYLSA-D-DLRINLWHLEITDRSFNIVDIKPANMEELT------EVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp EEEECTTSSEEEEE-C-SSEEEEEETTEEEEEEEEEECCCSSGGGCC------CCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred EEEEcCCCCEEEEe-C-CCeEEEEECCCCCceeeeeecccccccccC------cceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 45566789999987 4 4456666 321100111110 011100 001123445787 8888876 45789
Q ss_pred EECCCCe
Q 009420 224 FDYVNNK 230 (535)
Q Consensus 224 yDp~t~~ 230 (535)
||..+.+
T Consensus 254 wd~~~~~ 260 (447)
T 3dw8_B 254 CDMRASA 260 (447)
T ss_dssp EETTTCS
T ss_pred EECcCCc
Confidence 9988765
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.57 E-value=1.7 Score=41.57 Aligned_cols=139 Identities=11% Similarity=0.004 Sum_probs=70.9
Q ss_pred eeEEEECCCCCEEECcccccc--ccccceecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCc----ccccc
Q 009420 79 HSVEYSVLTNEFRPLFVQSNV--WCSSGAVRPDGV-LIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGA----RRWYA 151 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~--~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~----~R~y~ 151 (535)
.+.+||+.+++....-..... .....++.+||+ +|+.+.. ...+.+||.. +.+-...-.+.. ...-.
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK---SESLVKIDLV---TGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT---TTEEEEEETT---TCCEEEEEECCBTTEEEECTT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC---CCeEEEEECC---CCCeEeeEEcCCccccccccc
Confidence 578889888765432211111 233445667885 5666543 2579999987 554322111111 11223
Q ss_pred eEEEecCCcEEEEcCc-----------cCCeeEEEeCCCCCCee-eeccccccCCccccCCCcce-EEEeeCCcEEEEec
Q 009420 152 TDHILPDGRIIIIGGR-----------RQFNYEFYPKNGAPNVY-SLPFLVQTNDPRVENNLYPF-VFLNVDGFLFIFAN 218 (535)
Q Consensus 152 s~~~L~dG~vyvvGG~-----------~~~~~E~yP~~~~~~w~-~~~~l~~~~~~~~~~~~yp~-~~~~~dG~ifv~gg 218 (535)
.++.-+||+.++++.. ....+.+|.... .+.. ..+. ...|. ....+||+.+++++
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~-~~~~~~~~~-----------~~~~~~~~~s~dg~~l~~~~ 153 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-LSRRKAFEA-----------PRQITMLAWARDGSKLYGLG 153 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-TEEEEEEEC-----------CSSCCCEEECTTSSCEEEES
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCC-CcEEEEEeC-----------CCCcceeEECCCCCEEEEeC
Confidence 4566668854444421 123455563221 1111 1111 00122 34567898444457
Q ss_pred CeEEEEECCCCeEEEec
Q 009420 219 NRAILFDYVNNKVVKQY 235 (535)
Q Consensus 219 ~~~~~yDp~t~~W~~~~ 235 (535)
..+.+||..+++....+
T Consensus 154 ~~i~~~d~~~~~~~~~~ 170 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDK 170 (337)
T ss_dssp SSEEEEETTTTEEEEEE
T ss_pred CeEEEEECCCCcEeeee
Confidence 78999999998765433
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.54 E-value=1.3 Score=45.18 Aligned_cols=59 Identities=12% Similarity=-0.062 Sum_probs=37.9
Q ss_pred ceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCcee
Q 009420 78 AHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKE 140 (535)
Q Consensus 78 ~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~ 140 (535)
..+.+||......+.+... .....+.+.-+||+.+++++...+...+.++|.. +.+...
T Consensus 159 ~~i~i~d~~g~~~~~l~~~-~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~---tg~~~~ 217 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS-PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA---NGAVRQ 217 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE-SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT---TCCEEE
T ss_pred ceEEEEcCCCCCCEEEeCC-CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECC---CCcEEE
Confidence 3677888877665554321 1222334566899988888775455689999987 555443
No 135
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.48 E-value=1.5 Score=47.91 Aligned_cols=50 Identities=8% Similarity=0.215 Sum_probs=31.6
Q ss_pred eeEEEECCCCCEE-----ECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCC
Q 009420 79 HSVEYSVLTNEFR-----PLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 79 ~~~~yDp~t~~w~-----~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 131 (535)
.+.+||..++.-. ..-..+.....+.++.+||++++.|+.+ ..+++||..
T Consensus 406 ~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D---g~v~vwd~~ 460 (694)
T 3dm0_A 406 SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD---GELRLWDLA 460 (694)
T ss_dssp EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT
T ss_pred cEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC---CcEEEEECC
Confidence 5788988764311 1111233333344566899999999874 679999986
No 136
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.44 E-value=0.86 Score=48.18 Aligned_cols=133 Identities=8% Similarity=0.041 Sum_probs=69.9
Q ss_pred CcEEEEec---CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCccccccccc
Q 009420 211 GFLFIFAN---NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGV 287 (535)
Q Consensus 211 G~ifv~gg---~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~ 287 (535)
|+.++.|+ ..+.+||..+++... ..+... . +...-+... .+++.+++|+.+.
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~--~~~~~~--~-----~~v~~~~~s------~~g~~l~~~~~dg---------- 510 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSF--DLKTPL--R-----AKPSYISIS------PSETYIAAGDVMG---------- 510 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEE--ECSSCC--S-----SCEEEEEEC------TTSSEEEEEETTS----------
T ss_pred CCEEEEeecCCCeEEEEECCCccccc--cccCCc--c-----CceEEEEEC------CCCCEEEEcCCCC----------
Confidence 77666664 458899998776531 112211 1 111111222 2788888888652
Q ss_pred ccccCCceEEEEecCCCCCeeee-cCC--CCceeceeEEcc----------CCeEEEEcCCCCCCCCcccCCCCccccEE
Q 009420 288 FVAALNTCARIKITDPTPTWVLE-TMP--QPRVMGDMTLLP----------NGNVLLINGAGKGTAGWELGRDPVLAPVV 354 (535)
Q Consensus 288 ~~pa~~s~e~~d~~~~~~~W~~~-~m~--~~R~~~~~v~lp----------dG~I~vvGG~~~g~~g~~~~~~~~~~~e~ 354 (535)
.+..+|+.. .+.. .+. ....-.+....| ||+++++|+.+ + .+.+
T Consensus 511 ------~i~iw~~~~----~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-g------------~i~i 567 (615)
T 1pgu_A 511 ------KILLYDLQS----REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD-T------------NIFI 567 (615)
T ss_dssp ------CEEEEETTT----TEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT-S------------CEEE
T ss_pred ------eEEEeeCCC----CcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCC-C------------cEEE
Confidence 234455432 2222 221 222222335567 89999998865 2 5789
Q ss_pred EeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 355 YRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 355 YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
||..+.. +....+... ...-......+||+ +++||..
T Consensus 568 w~~~~~~-~~~~~~~~h---~~~v~~l~~s~~~~-l~s~~~d 604 (615)
T 1pgu_A 568 YSVKRPM-KIIKALNAH---KDGVNNLLWETPST-LVSSGAD 604 (615)
T ss_dssp EESSCTT-CCEEETTSS---TTCEEEEEEEETTE-EEEEETT
T ss_pred EECCCCc-eechhhhcC---ccceEEEEEcCCCC-eEEecCC
Confidence 9987751 123332211 11112345679999 8888754
No 137
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.40 E-value=0.41 Score=46.74 Aligned_cols=112 Identities=12% Similarity=0.058 Sum_probs=58.5
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccc-cceEEEec--CCcEEEEcCccCCeeEEE-eCCCCC
Q 009420 106 VRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRW-YATDHILP--DGRIIIIGGRRQFNYEFY-PKNGAP 181 (535)
Q Consensus 106 ~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~-y~s~~~L~--dG~vyvvGG~~~~~~E~y-P~~~~~ 181 (535)
+-+||++++.|+.+ ..+++||.. +.+...+..+..... -.+++..+ +|++++.|+.++ ++.+| ....
T Consensus 21 ~s~~g~~lasgs~D---~~v~lwd~~---~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~-~v~iWd~~~~-- 91 (316)
T 3bg1_A 21 MDYYGTRLATCSSD---RSVKIFDVR---NGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR-KVIIWREENG-- 91 (316)
T ss_dssp ECGGGCEEEEEETT---TEEEEEEEE---TTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS-CEEEECCSSS--
T ss_pred EcCCCCEEEEEeCC---CeEEEEEec---CCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC-EEEEEECCCC--
Confidence 34689999999874 679999986 443322222221111 11222222 478888888764 46677 4321
Q ss_pred CeeeeccccccCCccccCCCcceEEEeeC--CcEEEEec--CeEEEEECCCC-eEE
Q 009420 182 NVYSLPFLVQTNDPRVENNLYPFVFLNVD--GFLFIFAN--NRAILFDYVNN-KVV 232 (535)
Q Consensus 182 ~w~~~~~l~~~~~~~~~~~~yp~~~~~~d--G~ifv~gg--~~~~~yDp~t~-~W~ 232 (535)
.+.....+..... . --.+...|+ |++++.|+ ..+.+||..+. .|.
T Consensus 92 ~~~~~~~~~~h~~-----~-V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~ 141 (316)
T 3bg1_A 92 TWEKSHEHAGHDS-----S-VNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 141 (316)
T ss_dssp CCCEEEEECCCSS-----C-CCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE
T ss_pred cceEEEEccCCCC-----c-eEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc
Confidence 2221111111100 0 012333455 77888776 35788888765 454
No 138
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=95.34 E-value=0.52 Score=48.42 Aligned_cols=72 Identities=19% Similarity=0.191 Sum_probs=38.5
Q ss_pred eceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEe-CCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCC
Q 009420 318 MGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYR-PDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 318 ~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YD-P~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
.|.+++.-||+||..|-...|.-|..... ....+..-+ |... +...++ .-.+|+.| |.-||+||.-|-+.
T Consensus 287 ~hs~alt~~G~v~~wG~n~~GqLG~g~~~-~~~~p~~v~~~~~~---~v~~va----~G~~hs~a-lt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGWNKFGQVGVGNNL-DQCSPVQVRFPDDQ---KVVQVS----CGWRHTLA-VTERNNVFAWGRGT 357 (406)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSSSSS-CEEEEEEECCGGGC---CEEEEE----ECSSEEEE-EETTSCEEEEECCT
T ss_pred CEEEEEcCCCeEEEeeCCCCCCCCCCCCC-CCccCEEEeccCCC---cEEEEE----eCCCeEEE-EeCCCCEEEecCCC
Confidence 35566777999999985443332221111 111111111 2222 344332 23457544 56899999999876
Q ss_pred Cc
Q 009420 397 HA 398 (535)
Q Consensus 397 ~~ 398 (535)
++
T Consensus 358 ~G 359 (406)
T 4d9s_A 358 NG 359 (406)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 139
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.25 E-value=0.82 Score=45.59 Aligned_cols=50 Identities=8% Similarity=0.034 Sum_probs=27.6
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCC-cEEEEcCCCCCCCeEEEEcCC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDG-VLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG-~l~v~GG~~~g~~~v~~ydp~ 131 (535)
.+.+||..+++....-..+.....+.++.+++ .+++.||.+ ..+++||..
T Consensus 162 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d---g~v~~wd~~ 212 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGED---GRILLWDTR 212 (357)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETT---SCEEECCTT
T ss_pred eEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccC---CceEEEECC
Confidence 46788888876543322222222223344555 466676653 468888876
No 140
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.14 E-value=1.7 Score=41.38 Aligned_cols=69 Identities=13% Similarity=0.082 Sum_probs=41.6
Q ss_pred eEEEEe-eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCC--CEEECccc--cccccccceecC--CCcEE
Q 009420 41 MHMQLL-NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTN--EFRPLFVQ--SNVWCSSGAVRP--DGVLI 113 (535)
Q Consensus 41 ~~~~~~-~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~--~w~~~~~~--~~~~c~~~~~l~--dG~l~ 113 (535)
+..+.. ++++.++.|+.+ | .+.+||..++ .++.+... +.....+..+.+ |++++
T Consensus 14 v~~~~~~~~~~~l~~~~~d----------g---------~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l 74 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCSSD----------Q---------HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRII 74 (351)
T ss_dssp EEEEEECSSSSEEEEEETT----------S---------EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEE
T ss_pred eeEEEEcCCCCEEEEeeCC----------C---------eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEE
Confidence 333433 688888888743 2 4788887754 34443321 222222333445 58999
Q ss_pred EEcCCCCCCCeEEEEcCC
Q 009420 114 QTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 114 v~GG~~~g~~~v~~ydp~ 131 (535)
++|+.+ ..+.+||..
T Consensus 75 ~s~~~d---g~v~vwd~~ 89 (351)
T 3f3f_A 75 ASASYD---KTVKLWEED 89 (351)
T ss_dssp EEEETT---SCEEEEEEC
T ss_pred EEEcCC---CeEEEEecC
Confidence 999874 568899886
No 141
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.13 E-value=0.86 Score=43.29 Aligned_cols=131 Identities=14% Similarity=0.146 Sum_probs=70.1
Q ss_pred eeEEEECCCCCEEECccc-cccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecC---CCCcccccceEE
Q 009420 79 HSVEYSVLTNEFRPLFVQ-SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEID---GLGARRWYATDH 154 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~---~m~~~R~y~s~~ 154 (535)
.+.+||+.......+... ......+.++-++|++|+.... ...+.+||+. ......+. .+..+ .+.+
T Consensus 143 ~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~---g~~~~~~~~~g~~~~p---~~i~ 213 (286)
T 1q7f_A 143 RVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR---AHCVKVFNYE---GQYLRQIGGEGITNYP---IGVG 213 (286)
T ss_dssp EEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG---GTEEEEEETT---CCEEEEESCTTTSCSE---EEEE
T ss_pred EEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC---CCEEEEEcCC---CCEEEEEccCCccCCC---cEEE
Confidence 467888765544444321 1112234455678999998643 2579999986 43322332 12222 2455
Q ss_pred EecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceE-EEeeCCcEEEEec-CeEEEEECCC
Q 009420 155 ILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFV-FLNVDGFLFIFAN-NRAILFDYVN 228 (535)
Q Consensus 155 ~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~-~~~~dG~ifv~gg-~~~~~yDp~t 228 (535)
.-+||++||....++..+.+| +... .-..+.. .. ....|.. ...++|+||+... +.+.+|+...
T Consensus 214 ~d~~G~l~v~~~~~~~~i~~~~~~g~--~~~~~~~--~~------~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 214 INSNGEILIADNHNNFNLTIFTQDGQ--LISALES--KV------KHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp ECTTCCEEEEECSSSCEEEEECTTSC--EEEEEEE--SS------CCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred ECCCCCEEEEeCCCCEEEEEECCCCC--EEEEEcc--cC------CCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 556899999876554356777 3321 1111110 00 0113443 4457999998753 4567776543
No 142
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.09 E-value=3.3 Score=41.86 Aligned_cols=206 Identities=13% Similarity=0.140 Sum_probs=98.2
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCc-ccccceEEEec
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGA-RRWYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~-~R~y~s~~~L~ 157 (535)
.+.+||..+++-......+...+. ++..|+++++.|+.. ..+.++|.. .... .+..+.. ..........+
T Consensus 170 ~v~iWd~~~~~~~~~~~~h~~~v~--~~s~~~~~l~sgs~d---~~i~~~d~~---~~~~-~~~~~~~h~~~~~~~~~~~ 240 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNMTSHSARVG--SLSWNSYILSSGSRS---GHIHHHDVR---VAEH-HVATLSGHSQEVCGLRWAP 240 (420)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEE--EEEEETTEEEEEETT---SEEEEEETT---SSSC-EEEEEECCSSCEEEEEECT
T ss_pred eEEEEEcCCCcEEEEEeCCCCceE--EEeeCCCEEEEEeCC---CceeEeeec---ccce-eeEEecccccceeeeeecC
Confidence 477899888764333222222221 233488999998864 567888876 2221 1111111 11112344556
Q ss_pred CCcEEEEcCccCCeeEEEeCCCCC-CeeeeccccccCCccccCCCcceEEEee-CCcEEEEec----CeEEEEECCCCeE
Q 009420 158 DGRIIIIGGRRQFNYEFYPKNGAP-NVYSLPFLVQTNDPRVENNLYPFVFLNV-DGFLFIFAN----NRAILFDYVNNKV 231 (535)
Q Consensus 158 dG~vyvvGG~~~~~~E~yP~~~~~-~w~~~~~l~~~~~~~~~~~~yp~~~~~~-dG~ifv~gg----~~~~~yDp~t~~W 231 (535)
+|+.++.|+.++ .+.+|...... ....+........ .-......+ ++.+++.++ +.+.+||..+++-
T Consensus 241 ~g~~l~s~~~D~-~v~i~~~~~~~~~~~~~~~~~~~~~------~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~ 313 (420)
T 4gga_A 241 DGRHLASGGNDN-LVNVWPSAPGEGGWVPLQTFTQHQG------AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC 313 (420)
T ss_dssp TSSEEEEEETTS-CEEEEESSCCSSCSCCSEEECCCSS------CEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE
T ss_pred CCCeeeeeeccc-cceEEeeccccccceeeeeecccCC------ceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc
Confidence 888888888765 34455222110 1110000000000 000112233 455666543 4578999998875
Q ss_pred EEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-
Q 009420 232 VKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE- 310 (535)
Q Consensus 232 ~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~- 310 (535)
...+. .. ... -+.+..+ ....+++..|... ..+..+|.. +.+..
T Consensus 314 ~~~~~---~~-~~v----~~~~~~~--------~~~~lv~~sg~~d---------------~~I~iwd~~----~~~~v~ 358 (420)
T 4gga_A 314 LSAVD---AH-SQV----CSILWSP--------HYKELISGHGFAQ---------------NQLVIWKYP----TMAKVA 358 (420)
T ss_dssp EEEEE---CS-SCE----EEEEEET--------TTTEEEEEECTTT---------------CCEEEEETT----TCCEEE
T ss_pred ceeec---cc-cce----eeeeecC--------CCCeEEEEEecCC---------------CEEEEEECC----CCcEEE
Confidence 53321 11 000 1112211 2455555555431 234455543 22222
Q ss_pred --cCCCCceeceeEEccCCeEEEEcCCC
Q 009420 311 --TMPQPRVMGDMTLLPNGNVLLINGAG 336 (535)
Q Consensus 311 --~m~~~R~~~~~v~lpdG~I~vvGG~~ 336 (535)
.-+..+... +..-|||+.++.||.+
T Consensus 359 ~l~gH~~~V~~-l~~spdg~~l~S~s~D 385 (420)
T 4gga_A 359 ELKGHTSRVLS-LTMSPDGATVASAAAD 385 (420)
T ss_dssp EECCCSSCEEE-EEECTTSSCEEEEETT
T ss_pred EEcCCCCCEEE-EEEcCCCCEEEEEecC
Confidence 223445543 3456899999998865
No 143
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.06 E-value=0.81 Score=44.33 Aligned_cols=34 Identities=12% Similarity=0.242 Sum_probs=24.2
Q ss_pred ccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCC
Q 009420 100 WCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCD 137 (535)
Q Consensus 100 ~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~ 137 (535)
|-.+..+..||+||+..|.. +.+++..+|+. +.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~-~~s~v~~iD~~---tg~ 55 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLY-GRSSVRQVALQ---TGK 55 (266)
T ss_dssp CEEEEEECSTTEEEEEECST-TTCEEEEEETT---TCC
T ss_pred CcccEEEeCCCeEEEECCCC-CCCEEEEEECC---CCC
Confidence 44455555679999987742 34789999998 555
No 144
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.03 E-value=1.6 Score=41.55 Aligned_cols=163 Identities=12% Similarity=-0.069 Sum_probs=92.3
Q ss_pred cceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECc-cccccccccceecCCCcEEEEc
Q 009420 38 ISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLF-VQSNVWCSSGAVRPDGVLIQTG 116 (535)
Q Consensus 38 ~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~-~~~~~~c~~~~~l~dG~l~v~G 116 (535)
...-|...+.++++|+-.|.. +. ..+..+|++|++...-- .....|..+.+. .+++||++.
T Consensus 20 ~~ftqGL~~~~~~LyestG~~-g~----------------S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~-~~~~ly~lt 81 (243)
T 3mbr_X 20 TAFTEGLFYLRGHLYESTGET-GR----------------SSVRKVDLETGRILQRAEVPPPYFGAGIVA-WRDRLIQLT 81 (243)
T ss_dssp TCCEEEEEEETTEEEEEECCT-TS----------------CEEEEEETTTCCEEEEEECCTTCCEEEEEE-ETTEEEEEE
T ss_pred ccccccEEEECCEEEEECCCC-CC----------------ceEEEEECCCCCEEEEEeCCCCcceeEEEE-eCCEEEEEE
Confidence 345677777889999887743 21 36789999999986544 344556655544 488999986
Q ss_pred CCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCc
Q 009420 117 GFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDP 195 (535)
Q Consensus 117 G~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~ 195 (535)
.. .+.+.+||+. + .+.+...+.+....+.+.- ++++|+.=|. ..+.++ |.+. ..-...+.- ...
T Consensus 82 w~---~~~v~v~D~~---t--l~~~~ti~~~~~Gwglt~d-g~~L~vSdgs--~~l~~iDp~t~-~~~~~I~V~--~~g- 146 (243)
T 3mbr_X 82 WR---NHEGFVYDLA---T--LTPRARFRYPGEGWALTSD-DSHLYMSDGT--AVIRKLDPDTL-QQVGSIKVT--AGG- 146 (243)
T ss_dssp SS---SSEEEEEETT---T--TEEEEEEECSSCCCEEEEC-SSCEEEECSS--SEEEEECTTTC-CEEEEEECE--ETT-
T ss_pred ee---CCEEEEEECC---c--CcEEEEEeCCCCceEEeeC-CCEEEEECCC--CeEEEEeCCCC-eEEEEEEEc--cCC-
Confidence 44 3689999987 3 3333322222222244432 4567777663 234555 5542 111111110 000
Q ss_pred cccCCCcceEEEeeCCcEEEEe--cCeEEEEECCCCeEEEec
Q 009420 196 RVENNLYPFVFLNVDGFLFIFA--NNRAILFDYVNNKVVKQY 235 (535)
Q Consensus 196 ~~~~~~yp~~~~~~dG~ifv~g--g~~~~~yDp~t~~W~~~~ 235 (535)
.+. .+.......+|+||+.- .+.+.+.||++++....+
T Consensus 147 -~~~-~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 147 -RPL-DNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp -EEC-CCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEE
T ss_pred -ccc-ccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEE
Confidence 000 01112234599999764 357888999998876543
No 145
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.00 E-value=0.57 Score=45.59 Aligned_cols=114 Identities=12% Similarity=0.120 Sum_probs=56.0
Q ss_pred eecCCC-cEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecC---CcEEEEcCccCCeeEEE-eCCC
Q 009420 105 AVRPDG-VLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPD---GRIIIIGGRRQFNYEFY-PKNG 179 (535)
Q Consensus 105 ~~l~dG-~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~d---G~vyvvGG~~~~~~E~y-P~~~ 179 (535)
.+.++| ++++.|+...+...+.+||.. +.+............-.+++..++ |+++++|+.++ .+.+| ....
T Consensus 25 ~~~p~~~~l~~~~s~~~~d~~v~iw~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~ 100 (357)
T 3i2n_A 25 KWVPCSAKFVTMGNFARGTGVIQLYEIQ---HGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG-NLHIWNLEAP 100 (357)
T ss_dssp EECTTSSEEEEEEC--CCCEEEEEEEEC---SSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS-CEEEECTTSC
T ss_pred EEcCCCceEEEecCccCCCcEEEEEeCC---CCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC-eEEEEeCCCC
Confidence 355677 566667652223679999987 555543322222222233444445 68888887764 45566 2221
Q ss_pred CCCeeeeccccccCCccccCCCcceEE-----EeeCCcEEEEec--CeEEEEECCCCe
Q 009420 180 APNVYSLPFLVQTNDPRVENNLYPFVF-----LNVDGFLFIFAN--NRAILFDYVNNK 230 (535)
Q Consensus 180 ~~~w~~~~~l~~~~~~~~~~~~yp~~~-----~~~dG~ifv~gg--~~~~~yDp~t~~ 230 (535)
......+. .... ......+ ..++++.++.|+ ..+.+||..+.+
T Consensus 101 ~~~~~~~~---~~~~-----~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 101 EMPVYSVK---GHKE-----IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp SSCSEEEC---CCSS-----CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred CccEEEEE---eccc-----ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 00111111 1000 0000011 136888888776 357889988754
No 146
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.96 E-value=1.6 Score=43.86 Aligned_cols=138 Identities=20% Similarity=0.255 Sum_probs=70.7
Q ss_pred EeeCCcEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccc
Q 009420 207 LNVDGFLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAE 284 (535)
Q Consensus 207 ~~~dG~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~ 284 (535)
..+||+.++.|+ ..+.+||..+.+....+ ....... -+....| +++.++.|+.+.
T Consensus 131 ~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~---~~h~~~v----~~~~~~p---------~~~~l~s~s~d~------- 187 (393)
T 1erj_A 131 FSPDGKFLATGAEDRLIRIWDIENRKIVMIL---QGHEQDI----YSLDYFP---------SGDKLVSGSGDR------- 187 (393)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCE----EEEEECT---------TSSEEEEEETTS-------
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcEEEEE---ccCCCCE----EEEEEcC---------CCCEEEEecCCC-------
Confidence 346788777775 35788999888755332 2210000 0111212 566777777541
Q ss_pred cccccccCCceEEEEecCCCCCeeee-cCCCCceeceeEEcc-CCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCC
Q 009420 285 KGVFVAALNTCARIKITDPTPTWVLE-TMPQPRVMGDMTLLP-NGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPG 362 (535)
Q Consensus 285 ~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~R~~~~~v~lp-dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g 362 (535)
.+..+|+.. .+.... ... ... ......| ||+++++|+.+ + .+.+||..+.
T Consensus 188 ---------~v~iwd~~~--~~~~~~~~~~-~~v-~~~~~~~~~~~~l~~~s~d-~------------~v~iwd~~~~-- 239 (393)
T 1erj_A 188 ---------TVRIWDLRT--GQCSLTLSIE-DGV-TTVAVSPGDGKYIAAGSLD-R------------AVRVWDSETG-- 239 (393)
T ss_dssp ---------EEEEEETTT--TEEEEEEECS-SCE-EEEEECSTTCCEEEEEETT-S------------CEEEEETTTC--
T ss_pred ---------cEEEEECCC--CeeEEEEEcC-CCc-EEEEEECCCCCEEEEEcCC-C------------cEEEEECCCC--
Confidence 233445432 111111 111 111 2234456 89999998865 2 4789998876
Q ss_pred Ccee-ecCCCCCCcccc----cceeecCCCcEEEecCCC
Q 009420 363 SRFD-LQNPSTIPRMYH----STAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 363 ~~Wt-~~~~~~~~R~yh----s~a~LlpDG~V~v~GG~~ 396 (535)
+-. .+.........| ....+.|||+.+++|+..
T Consensus 240 -~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d 277 (393)
T 1erj_A 240 -FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 277 (393)
T ss_dssp -CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred -cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 432 221110000112 124456899999999864
No 147
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.90 E-value=1.5 Score=41.49 Aligned_cols=60 Identities=7% Similarity=0.056 Sum_probs=36.6
Q ss_pred CCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE
Q 009420 108 PDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 108 ~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 175 (535)
+++..+++|+.+ ..+.+||.. +.+-...-.. ....-.+++..+|++.+++|+.++. +.+|
T Consensus 27 ~~~~~l~s~~~d---g~v~vw~~~---~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~-i~~~ 86 (313)
T 3odt_A 27 VDDSKVASVSRD---GTVRLWSKD---DQWLGTVVYT-GQGFLNSVCYDSEKELLLFGGKDTM-INGV 86 (313)
T ss_dssp EETTEEEEEETT---SEEEEEEES---SSEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTSC-EEEE
T ss_pred cCCCEEEEEEcC---CcEEEEECC---CCEEEEEeec-CCccEEEEEECCCCCEEEEecCCCe-EEEE
Confidence 688888888764 578999986 3322211111 1122335566678999999987653 3444
No 148
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.81 E-value=3.3 Score=41.97 Aligned_cols=133 Identities=13% Similarity=0.058 Sum_probs=68.5
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceec-CCCCcccccceEEEec
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEI-DGLGARRWYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~-~~m~~~R~y~s~~~L~ 157 (535)
.+.+||..+++....-..+... ...+..++..+++|+.+ ..+.+||.. +.+-... ..+......-.....
T Consensus 194 ~i~vwd~~~~~~~~~~~~h~~~--v~~l~~~~~~l~s~s~d---g~i~vwd~~---~~~~~~~~~~~~~~~~~v~~~~~- 264 (435)
T 1p22_A 194 TVRVWDVNTGEMLNTLIHHCEA--VLHLRFNNGMMVTCSKD---RSIAVWDMA---SPTDITLRRVLVGHRAAVNVVDF- 264 (435)
T ss_dssp CEEEEESSSCCEEEEECCCCSC--EEEEECCTTEEEEEETT---SCEEEEECS---SSSCCEEEEEECCCSSCEEEEEE-
T ss_pred eEEEEECCCCcEEEEEcCCCCc--EEEEEEcCCEEEEeeCC---CcEEEEeCC---CCCCceeeeEecCCCCcEEEEEe-
Confidence 4788999887654322111111 11122356678888763 578999987 3321111 111111111223333
Q ss_pred CCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeEEE
Q 009420 158 DGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKVVK 233 (535)
Q Consensus 158 dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W~~ 233 (535)
+++.+++|+.++ .+.+| ..+. ... ..+.... .+...+..++++++.|+ ..+.+||..+++-..
T Consensus 265 ~~~~l~s~~~dg-~i~vwd~~~~--~~~--~~~~~~~--------~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 330 (435)
T 1p22_A 265 DDKYIVSASGDR-TIKVWNTSTC--EFV--RTLNGHK--------RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 330 (435)
T ss_dssp ETTEEEEEETTS-EEEEEETTTC--CEE--EEEECCS--------SCEEEEEEETTEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCCEEEEEeCCC-eEEEEECCcC--cEE--EEEcCCC--------CcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEE
Confidence 788888887754 45666 3321 111 1111110 12234445778777775 468899998876543
No 149
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.81 E-value=2.3 Score=40.63 Aligned_cols=137 Identities=10% Similarity=0.051 Sum_probs=76.9
Q ss_pred eeEEEECCCCCEEECccc----cccccccceecCCCcEEEE----cCC----------CCCCCeEEEEcCCCCCCCCcee
Q 009420 79 HSVEYSVLTNEFRPLFVQ----SNVWCSSGAVRPDGVLIQT----GGF----------NDGEKKIRSFVPCNDESCDWKE 140 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~----~~~~c~~~~~l~dG~l~v~----GG~----------~~g~~~v~~ydp~~~~~~~W~~ 140 (535)
.+.+||+++++.+.+... ...+....++.++|++|+. |.. ..+...+..||+. .+...
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~----g~~~~ 166 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD----GTLSA 166 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT----SCEEE
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC----CCEEE
Confidence 478999999998766421 1112334556789999997 431 0112478888885 22332
Q ss_pred c-CCCCcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCe-eeeccccccCCccccCCCcce-EEEeeCCcEEEE
Q 009420 141 I-DGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNV-YSLPFLVQTNDPRVENNLYPF-VFLNVDGFLFIF 216 (535)
Q Consensus 141 ~-~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w-~~~~~l~~~~~~~~~~~~yp~-~~~~~dG~ifv~ 216 (535)
+ ..+..+ .+.+.-+||+++ +.......+.+| ...+ ... .....+ .. ...+|. +..-++|+||+.
T Consensus 167 ~~~~~~~~---~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~-g~~~~~~~~~-~~------~~~~p~~i~~d~~G~l~v~ 234 (296)
T 3e5z_A 167 PIRDRVKP---NGLAFLPSGNLL-VSDTGDNATHRYCLNAR-GETEYQGVHF-TV------EPGKTDGLRVDAGGLIWAS 234 (296)
T ss_dssp EECCCSSE---EEEEECTTSCEE-EEETTTTEEEEEEECSS-SCEEEEEEEE-CC------SSSCCCSEEEBTTSCEEEE
T ss_pred eecCCCCC---ccEEECCCCCEE-EEeCCCCeEEEEEECCC-CcCcCCCeEe-eC------CCCCCCeEEECCCCCEEEE
Confidence 2 223222 245666789988 444444456666 4321 122 111111 10 011233 455679999998
Q ss_pred ecCeEEEEECCCCeE
Q 009420 217 ANNRAILFDYVNNKV 231 (535)
Q Consensus 217 gg~~~~~yDp~t~~W 231 (535)
.+..+.+||++....
T Consensus 235 ~~~~v~~~~~~g~~~ 249 (296)
T 3e5z_A 235 AGDGVHVLTPDGDEL 249 (296)
T ss_dssp ETTEEEEECTTSCEE
T ss_pred cCCeEEEECCCCCEE
Confidence 877899999985543
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.72 E-value=1.4 Score=42.70 Aligned_cols=63 Identities=8% Similarity=-0.008 Sum_probs=36.4
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCc-EEEEcCccCCeeEEE
Q 009420 106 VRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGR-IIIIGGRRQFNYEFY 175 (535)
Q Consensus 106 ~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~-vyvvGG~~~~~~E~y 175 (535)
+-.++++|++++.. ..+.++|+. +.+....-++.....-...+.-+||+ +|+.+.. ...+.+|
T Consensus 7 ~~~~~~~~v~~~~~---~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-~~~i~~~ 70 (349)
T 1jmx_B 7 LKAGHEYMIVTNYP---NNLHVVDVA---SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH-YGDIYGI 70 (349)
T ss_dssp CCTTCEEEEEEETT---TEEEEEETT---TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT-TTEEEEE
T ss_pred ccCCCEEEEEeCCC---CeEEEEECC---CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC-CCcEEEE
Confidence 34578899988653 689999997 55443221222100233556667886 5666533 3455666
No 151
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.65 E-value=0.43 Score=47.40 Aligned_cols=47 Identities=15% Similarity=0.085 Sum_probs=27.7
Q ss_pred EEECCCCCEEECccccccccccceecC-CCcEEEEcCCCCCCCeEEEEcCC
Q 009420 82 EYSVLTNEFRPLFVQSNVWCSSGAVRP-DGVLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 82 ~yDp~t~~w~~~~~~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~ 131 (535)
+||..+++-..+...+.....+.++.+ +|+++++|+.+ ..+.+||..
T Consensus 27 v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~d---g~i~iw~~~ 74 (408)
T 4a11_B 27 VLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSD---GVIVLYDLE 74 (408)
T ss_dssp HHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETT---SCEEEEECC
T ss_pred eeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCC---CeEEEEECC
Confidence 344444433333222333333444667 89999999874 568999987
No 152
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.56 E-value=1.1 Score=41.81 Aligned_cols=132 Identities=13% Similarity=0.122 Sum_probs=72.5
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecC--CCCcccccceEEEe
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEID--GLGARRWYATDHIL 156 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~--~m~~~R~y~s~~~L 156 (535)
.+.+||+.++..............+.++.++|+||+.... ...+.+||+. +....... .+..+ .+.+.-
T Consensus 88 ~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~---~~~~~~~~~~~~~~p---~~i~~~ 158 (270)
T 1rwi_B 88 RVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRG---NNRVVKLAAG---SKTQTVLPFTGLNDP---DGVAVD 158 (270)
T ss_dssp EEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGG---GTEEEEECTT---CCSCEECCCCSCCSC---CCEEEC
T ss_pred EEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECC---CCEEEEEECC---CceeEeeccccCCCc---eeEEEe
Confidence 4678898887766554222122334455678999998533 2468888876 44433222 22222 245555
Q ss_pred cCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceE-EEeeCCcEEEEe--cCeEEEEECCCCeE
Q 009420 157 PDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFV-FLNVDGFLFIFA--NNRAILFDYVNNKV 231 (535)
Q Consensus 157 ~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~-~~~~dG~ifv~g--g~~~~~yDp~t~~W 231 (535)
++|++|+....+ ..+..| +... ....... . ....|.. .+-++|+||+.. ++.+.+||+.+...
T Consensus 159 ~~g~l~v~~~~~-~~i~~~~~~~~--~~~~~~~--~-------~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 159 NSGNVYVTDTDN-NRVVKLEAESN--NQVVLPF--T-------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp TTCCEEEEEGGG-TEEEEECTTTC--CEEECCC--S-------SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred CCCCEEEEECCC-CEEEEEecCCC--ceEeecc--c-------CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 689999875432 244555 3321 1111100 0 0023444 344688999986 45788999877653
No 153
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=94.42 E-value=2.6 Score=41.82 Aligned_cols=48 Identities=13% Similarity=-0.017 Sum_probs=29.8
Q ss_pred eEEEECCCCCEEECccc---cccccccceecCCCcEEEEcCCCCCCCeEEEEcCC
Q 009420 80 SVEYSVLTNEFRPLFVQ---SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 80 ~~~yDp~t~~w~~~~~~---~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 131 (535)
+..+|+++++.+.+... ....+...++-+||+.+.++... .+.+||..
T Consensus 18 ~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~----~v~~~~~~ 68 (365)
T 1jof_A 18 TVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK----KWSSFAVK 68 (365)
T ss_dssp EEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT----EEEEEEEE
T ss_pred EEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc----eEEEEEEC
Confidence 45678899988776432 12234445566899855555432 68888863
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.41 E-value=0.85 Score=44.18 Aligned_cols=154 Identities=13% Similarity=0.088 Sum_probs=81.9
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcccccc-ccccceecCCCc-EEEEcCCCCCCCe
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNV-WCSSGAVRPDGV-LIQTGGFNDGEKK 124 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~-~c~~~~~l~dG~-l~v~GG~~~g~~~ 124 (535)
.++++|+.++.+ ..+.+||+.+++....-..... .....++.+||+ +|+.+.. ...
T Consensus 9 ~~~~~~v~~~~~-------------------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~---~~~ 66 (349)
T 1jmx_B 9 AGHEYMIVTNYP-------------------NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH---YGD 66 (349)
T ss_dssp TTCEEEEEEETT-------------------TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---TTE
T ss_pred CCCEEEEEeCCC-------------------CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC---CCc
Confidence 477888877632 2578999999876533211121 123344567887 6666533 257
Q ss_pred EEEEcCCCCCCCCceecCCCCc-----ccccceEEEecCCcEEEEcCcc-----------CCeeEEE-eCCCCCCeeeec
Q 009420 125 IRSFVPCNDESCDWKEIDGLGA-----RRWYATDHILPDGRIIIIGGRR-----------QFNYEFY-PKNGAPNVYSLP 187 (535)
Q Consensus 125 v~~ydp~~~~~~~W~~~~~m~~-----~R~y~s~~~L~dG~vyvvGG~~-----------~~~~E~y-P~~~~~~w~~~~ 187 (535)
+.+||+. +.+-...-.+.. ...-...+.-+||+.+++++.+ ...+.+| ..+. ..-....
T Consensus 67 i~~~d~~---t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~ 142 (349)
T 1jmx_B 67 IYGIDLD---TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG-LEAKPVR 142 (349)
T ss_dssp EEEEETT---TTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG-GGBCCSE
T ss_pred EEEEeCC---CCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc-cccceee
Confidence 9999987 554332111211 1112345666789877776643 2344555 3221 0000000
Q ss_pred cccccCCccccCCCcce-EEEeeCCcEEEEecCeEEEEECCCCeEEEec
Q 009420 188 FLVQTNDPRVENNLYPF-VFLNVDGFLFIFANNRAILFDYVNNKVVKQY 235 (535)
Q Consensus 188 ~l~~~~~~~~~~~~yp~-~~~~~dG~ifv~gg~~~~~yDp~t~~W~~~~ 235 (535)
.... ...+. ....+||++|+ ++..+.+||+++.+....+
T Consensus 143 ~~~~--------~~~~~~~~~s~dg~l~~-~~~~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 143 TFPM--------PRQVYLMRAADDGSLYV-AGPDIYKMDVKTGKYTVAL 182 (349)
T ss_dssp EEEC--------CSSCCCEEECTTSCEEE-ESSSEEEECTTTCCEEEEE
T ss_pred eccC--------CCcccceeECCCCcEEE-ccCcEEEEeCCCCceeccc
Confidence 0000 00112 33568999777 4556899999988765434
No 155
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.33 E-value=3.7 Score=39.04 Aligned_cols=63 Identities=13% Similarity=-0.016 Sum_probs=36.5
Q ss_pred eecCCCcEEEE-------cCCCCCCCeEEEEcCCCCCCCCceecCC--C-CcccccceEEEecC-CcEEEEcCccCCeeE
Q 009420 105 AVRPDGVLIQT-------GGFNDGEKKIRSFVPCNDESCDWKEIDG--L-GARRWYATDHILPD-GRIIIIGGRRQFNYE 173 (535)
Q Consensus 105 ~~l~dG~l~v~-------GG~~~g~~~v~~ydp~~~~~~~W~~~~~--m-~~~R~y~s~~~L~d-G~vyvvGG~~~~~~E 173 (535)
++..+|++|+. +.. ...+.+||+. +.++..... . .....-.+.+.-.| |++|+....+ .+.
T Consensus 24 ~~~~~g~l~~~~~~~~~~~~~---~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~--~l~ 95 (314)
T 1pjx_A 24 VFDKNGDFYIVAPEVEVNGKP---AGEILRIDLK---TGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL--GLL 95 (314)
T ss_dssp EECTTSCEEEEETTCEETTEE---CCEEEEECTT---TCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT--EEE
T ss_pred eECCCCCEEEEEeccccCCCC---CCEEEEEeCC---CCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC--CEE
Confidence 34468999988 322 2568999987 677765432 0 01122234455567 8999876432 344
Q ss_pred EE
Q 009420 174 FY 175 (535)
Q Consensus 174 ~y 175 (535)
.|
T Consensus 96 ~~ 97 (314)
T 1pjx_A 96 VV 97 (314)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 156
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.28 E-value=0.22 Score=55.56 Aligned_cols=57 Identities=9% Similarity=0.073 Sum_probs=32.9
Q ss_pred CCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCC---CcEEEecCCC
Q 009420 326 NGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRD---GRVLVGGSNP 396 (535)
Q Consensus 326 dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpD---G~V~v~GG~~ 396 (535)
|++++++|+.+ | .+.+||..+.. ..++....+......-......|| |+++++||..
T Consensus 169 d~~~l~sgs~d-g------------~I~iwd~~~~~-~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 169 ESRKFVTGGAD-N------------LVKIWKYNSDA-QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 228 (753)
T ss_dssp GGCCEEEEETT-S------------CEEEEEEETTT-TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS
T ss_pred CCCEEEEEECC-C------------eEEEEeccCCc-ccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC
Confidence 68888888765 2 46888876651 133333222111111123445688 8999999864
No 157
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.27 E-value=1.4 Score=43.28 Aligned_cols=152 Identities=12% Similarity=0.118 Sum_probs=84.4
Q ss_pred CCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECc-cccccccccceecCCCcEEEEcCCCCCCCeEE
Q 009420 48 NDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLF-VQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIR 126 (535)
Q Consensus 48 ~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~-~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~ 126 (535)
+++.++.++.+ | .+.+||..+++-.... ........+.++.+||+++++|+.+ ..++
T Consensus 138 ~~~~l~s~s~d----------g---------~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d---g~i~ 195 (343)
T 3lrv_A 138 NTEYFIWADNR----------G---------TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD---GILD 195 (343)
T ss_dssp -CCEEEEEETT----------C---------CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT---SCEE
T ss_pred CCCEEEEEeCC----------C---------cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC---CEEE
Confidence 67777777643 2 4789999988764433 2222234445567899999999874 5799
Q ss_pred EEcCCCCCCCCce--ecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcc
Q 009420 127 SFVPCNDESCDWK--EIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYP 203 (535)
Q Consensus 127 ~ydp~~~~~~~W~--~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp 203 (535)
+||.. +.+-. .+. ......-.+++.-+||+.++.|+ ++ .+.+| .++. .....+..+... . ....- .
T Consensus 196 iwd~~---~~~~~~~~~~-~~h~~~v~~l~fs~~g~~l~s~~-~~-~v~iwd~~~~-~~~~~~~~~~~~-~--~~~~~-~ 264 (343)
T 3lrv_A 196 VYNLS---SPDQASSRFP-VDEEAKIKEVKFADNGYWMVVEC-DQ-TVVCFDLRKD-VGTLAYPTYTIP-E--FKTGT-V 264 (343)
T ss_dssp EEESS---CTTSCCEECC-CCTTSCEEEEEECTTSSEEEEEE-SS-BEEEEETTSS-TTCBSSCCCBC--------CC-E
T ss_pred EEECC---CCCCCccEEe-ccCCCCEEEEEEeCCCCEEEEEe-CC-eEEEEEcCCC-Ccceeecccccc-c--ccccc-e
Confidence 99987 44322 111 11122223455567899999888 33 77778 3321 111111100000 0 00000 1
Q ss_pred eEEEeeCCcEEEE--e-cCeEEEEEC--CCCeEE
Q 009420 204 FVFLNVDGFLFIF--A-NNRAILFDY--VNNKVV 232 (535)
Q Consensus 204 ~~~~~~dG~ifv~--g-g~~~~~yDp--~t~~W~ 232 (535)
....-++|+.++. + ++.+.+||. ....|.
T Consensus 265 ~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~ 298 (343)
T 3lrv_A 265 TYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT 298 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE
T ss_pred EEEECCCCCEEEEecCCCCcEEEEEEcccccceE
Confidence 2445678998888 4 556777876 445676
No 158
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.25 E-value=4.6 Score=39.79 Aligned_cols=115 Identities=10% Similarity=0.034 Sum_probs=62.5
Q ss_pred cceecCCC-cEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCC-CcccccceEEEec-CCcEEEEcCccCCeeEEEeCCC
Q 009420 103 SGAVRPDG-VLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGL-GARRWYATDHILP-DGRIIIIGGRRQFNYEFYPKNG 179 (535)
Q Consensus 103 ~~~~l~dG-~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m-~~~R~y~s~~~L~-dG~vyvvGG~~~~~~E~yP~~~ 179 (535)
+.++.++| +++++|+.+ ..+++||.. +.+....-.+ .....-.+++..+ |++.+++|+.++ .+.+|....
T Consensus 78 ~~~~~~~~~~~l~s~~~d---g~i~iwd~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~ 150 (383)
T 3ei3_B 78 SLEWHPTHPTTVAVGSKG---GDIILWDYD---VQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG-ATTLRDFSG 150 (383)
T ss_dssp EEEECSSCTTEEEEEEBT---SCEEEEETT---STTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT-EEEEEETTS
T ss_pred EEEECCCCCCEEEEEcCC---CeEEEEeCC---CcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC-EEEEEECCC
Confidence 34456788 899998863 579999987 5555443222 1222223445555 568888887653 456662221
Q ss_pred CCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCeE
Q 009420 180 APNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNKV 231 (535)
Q Consensus 180 ~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~W 231 (535)
.....+...... ....-.....+++++++.|+ ..+.+||......
T Consensus 151 -~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 197 (383)
T 3ei3_B 151 -SVIQVFAKTDSW------DYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEI 197 (383)
T ss_dssp -CEEEEEECCCCS------SCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEE
T ss_pred -CceEEEeccCCC------CCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEE
Confidence 111111100000 00011234457899888876 4678899865443
No 159
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.02 E-value=0.75 Score=46.68 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=39.5
Q ss_pred cceecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCC-ceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE
Q 009420 103 SGAVRP-DGVLIQTGGFNDGEKKIRSFVPCNDESCD-WKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 103 ~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~~~-W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 175 (535)
+.++.+ ||+++++|+.+ ..+++||..+..... +.....+.....-.+++..++++.+++|+.++ .+.+|
T Consensus 68 ~~~~s~~~~~~l~s~s~d---g~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg-~i~vw 138 (437)
T 3gre_A 68 SSAVSPGETPYLITGSDQ---GVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDG-QIIVL 138 (437)
T ss_dssp EEEEECSSSCEEEEEETT---SEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTS-EEEEE
T ss_pred EEEECCCCCCEEEEecCC---ceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Confidence 445667 89999999864 578999975100021 11011111122233556667889999888764 34455
No 160
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=93.80 E-value=5.3 Score=38.91 Aligned_cols=246 Identities=15% Similarity=0.116 Sum_probs=118.5
Q ss_pred cceecCCCcEEEEcCCCCC---------------------CCeEEEEcCCCCCCCCceecC---CCCcccccceEEEecC
Q 009420 103 SGAVRPDGVLIQTGGFNDG---------------------EKKIRSFVPCNDESCDWKEID---GLGARRWYATDHILPD 158 (535)
Q Consensus 103 ~~~~l~dG~l~v~GG~~~g---------------------~~~v~~ydp~~~~~~~W~~~~---~m~~~R~y~s~~~L~d 158 (535)
+.++-++|++||.+..... ...+.++|+. +.+..... .+..++ ..++-++
T Consensus 28 ~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~p~---gia~d~~ 101 (329)
T 3fvz_A 28 GVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN---NAEILQSSGKNLFYLPH---GLSIDTD 101 (329)
T ss_dssp EEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT---TCCEEEEECTTTCSSEE---EEEECTT
T ss_pred EEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC---CCeEEeccCCCccCCce---EEEECCC
Confidence 4456678999988754310 1368999997 55543221 222222 4566678
Q ss_pred CcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEE-Eee-CCcEEEEec---CeEEEEECCCCeEE
Q 009420 159 GRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVF-LNV-DGFLFIFAN---NRAILFDYVNNKVV 232 (535)
Q Consensus 159 G~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~-~~~-dG~ifv~gg---~~~~~yDp~t~~W~ 232 (535)
|++||....+ ..+..| +......-..+... .........-.+|... +.+ +|+||+... ..+.+||+......
T Consensus 102 g~l~v~d~~~-~~v~~~~~~g~~~~~~~~~~~-~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~ 179 (329)
T 3fvz_A 102 GNYWVTDVAL-HQVFKLDPHSKEGPLLILGRS-MQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVT 179 (329)
T ss_dssp SCEEEEETTT-TEEEEECTTCSSCCSEEESBT-TBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEE
T ss_pred CCEEEEECCC-CEEEEEeCCCCeEEEEEeccc-CCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEE
Confidence 9999986543 345555 33210000111000 0000000111246554 445 899999873 46889997654433
Q ss_pred EecCCCCCC-----CCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCe
Q 009420 233 KQYPAIPGG-----DPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTW 307 (535)
Q Consensus 233 ~~~p~~p~~-----~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W 307 (535)
.+...... ....+| .+ .++-| ..++||++...+ ..+.+||+.+ .+.
T Consensus 180 -~~~~~g~~~~~~~~~~~~p-~g-ia~d~--------~~g~l~v~d~~~----------------~~I~~~~~~~--G~~ 230 (329)
T 3fvz_A 180 -QWGEESSGSSPRPGQFSVP-HS-LALVP--------HLDQLCVADREN----------------GRIQCFKTDT--KEF 230 (329)
T ss_dssp -EECEECCSSSCCTTEESCE-EE-EEEET--------TTTEEEEEETTT----------------TEEEEEETTT--CCE
T ss_pred -EeccCCCCCCCCCcccCCC-cE-EEEEC--------CCCEEEEEECCC----------------CEEEEEECCC--CcE
Confidence 23210000 001122 11 12211 138999986532 2455666642 333
Q ss_pred eee-cC--CCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceee-cCCCCCCcccccceee
Q 009420 308 VLE-TM--PQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDL-QNPSTIPRMYHSTAVL 383 (535)
Q Consensus 308 ~~~-~m--~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~-~~~~~~~R~yhs~a~L 383 (535)
... .. ...+.. +...-| |.+|+..|... .. +.....+.+||+.+. +... +......-.+.....+
T Consensus 231 ~~~~~~~~~~~~~~-~~~~~p-g~~~~~~g~~~-v~-----~~~~~~v~~~~~~~g---~~~~~~~~~~~~~~~p~~ia~ 299 (329)
T 3fvz_A 231 VREIKHASFGRNVF-AISYIP-GFLFAVNGKPY-FG-----DQEPVQGFVMNFSSG---EIIDVFKPVRKHFDMPHDIVA 299 (329)
T ss_dssp EEEECCTTTTTCEE-EEEEET-TEEEEEECCCC-TT-----CSCCCCEEEEETTTC---CEEEEECCSSSCCSSEEEEEE
T ss_pred EEEEeccccCCCcc-eeeecC-CEEEEeCCCEE-ec-----cCCCcEEEEEEcCCC---eEEEEEcCCCCccCCeeEEEE
Confidence 322 11 112222 223344 77888777531 11 111236789998876 5443 2211111111223446
Q ss_pred cCCCcEEEecCCC
Q 009420 384 LRDGRVLVGGSNP 396 (535)
Q Consensus 384 lpDG~V~v~GG~~ 396 (535)
.+||.|||+....
T Consensus 300 ~~dG~lyvad~~~ 312 (329)
T 3fvz_A 300 SEDGTVYIGDAHT 312 (329)
T ss_dssp CTTSEEEEEESSS
T ss_pred CCCCCEEEEECCC
Confidence 7999999998653
No 161
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.69 E-value=6.9 Score=39.85 Aligned_cols=68 Identities=18% Similarity=0.236 Sum_probs=41.3
Q ss_pred EEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCC
Q 009420 42 HMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDG 121 (535)
Q Consensus 42 ~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g 121 (535)
..++-++|+||+.+..+ ..+.+||+.+++.+.+...... +. .++.++|+.+.+.... +
T Consensus 135 ~la~d~~g~lyv~d~~~-------------------~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~-~ 192 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRDD-------------------PRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWE-G 192 (409)
T ss_dssp EEEECSTTEEEEEETTT-------------------TEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSS-T
T ss_pred EEEEeCCCCEEEEecCC-------------------CcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecC-C
Confidence 33334789999887521 2478999999887766433222 22 5566777644443331 1
Q ss_pred CCeEEEEcCC
Q 009420 122 EKKIRSFVPC 131 (535)
Q Consensus 122 ~~~v~~ydp~ 131 (535)
...+.+||+.
T Consensus 193 ~~~I~~~d~~ 202 (409)
T 3hrp_A 193 THTVYVYMKA 202 (409)
T ss_dssp TCEEEEEEGG
T ss_pred CceEEEEEcC
Confidence 2378899986
No 162
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=93.56 E-value=10 Score=41.30 Aligned_cols=103 Identities=12% Similarity=0.041 Sum_probs=62.3
Q ss_pred eEEEEeeCCeEEEEecC-CCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccc---------------------
Q 009420 41 MHMQLLNNDRVVMFDRS-DFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSN--------------------- 98 (535)
Q Consensus 41 ~~~~~~~~gkv~v~gg~-~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~--------------------- 98 (535)
.+...-+||+.+++++. + +.. ....+.+||..+++.+.+.....
T Consensus 40 ~~~~~SpdG~~la~~~~~d-~~~-------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (741)
T 2ecf_A 40 MKPKVAPDGSRVTFLRGKD-SDR-------------NQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRI 105 (741)
T ss_dssp EEEEECTTSSEEEEEECCS-SCT-------------TEEEEEEEETTTCCEEEEECGGGTC-------------------
T ss_pred CCceEecCCCEEEEEeccC-CCC-------------cccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhh
Confidence 34455579988777764 3 111 12368899999998876643211
Q ss_pred ---cccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCC---CceecCCCCcccccceEEEecCCcEEEEcC
Q 009420 99 ---VWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESC---DWKEIDGLGARRWYATDHILPDGRIIIIGG 166 (535)
Q Consensus 99 ---~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~---~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG 166 (535)
......++-+||+.++++.. ..++++|.. +. .-..+..- ...-...+.-+||+.++++.
T Consensus 106 ~~~~~v~~~~~SpDg~~l~~~~~----~~i~~~d~~---~~~~~~~~~l~~~--~~~~~~~~~SPDG~~la~~~ 170 (741)
T 2ecf_A 106 AAMTGIVDYQWSPDAQRLLFPLG----GELYLYDLK---QEGKAAVRQLTHG--EGFATDAKLSPKGGFVSFIR 170 (741)
T ss_dssp -CCEESCCCEECTTSSEEEEEET----TEEEEEESS---SCSTTSCCBCCCS--SSCEEEEEECTTSSEEEEEE
T ss_pred ccccCcceeEECCCCCEEEEEeC----CcEEEEECC---CCCcceEEEcccC--CcccccccCCCCCCEEEEEe
Confidence 11234556789998888764 679999987 54 33333321 12223455667898666654
No 163
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=93.48 E-value=5.4 Score=43.58 Aligned_cols=164 Identities=12% Similarity=0.034 Sum_probs=87.5
Q ss_pred EeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCC---
Q 009420 45 LLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDG--- 121 (535)
Q Consensus 45 ~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g--- 121 (535)
.-+||+.+++.....|. ....+.++|..+++...............+..+||+.++.+.....
T Consensus 128 ~SPDG~~la~~~~~~G~--------------~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 128 VSWDGKKVAFAQKPNAA--------------DEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp ECTTSSEEEEEEEETTC--------------SCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTS
T ss_pred ECCCCCEEEEEECCCCC--------------ceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCC
Confidence 34788888776543121 1236889999999875111112221145667889998887765321
Q ss_pred -------CCeEEEEcCCCCCCCCce--ecCCCC-cccccceEEEecCCcEEEEcCccC-CeeEEE-eCCCCCCeeeeccc
Q 009420 122 -------EKKIRSFVPCNDESCDWK--EIDGLG-ARRWYATDHILPDGRIIIIGGRRQ-FNYEFY-PKNGAPNVYSLPFL 189 (535)
Q Consensus 122 -------~~~v~~ydp~~~~~~~W~--~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~~-~~~E~y-P~~~~~~w~~~~~l 189 (535)
...+++++.. +..-. .+-... ...+..+...-+||+.+++...+. ...++| -......+..+..
T Consensus 194 ~~~~~~~~~~v~~~~l~---t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~- 269 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLG---TEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK- 269 (695)
T ss_dssp CGGGGGGGCEEEEEETT---SCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE-
T ss_pred ccccCCCCCEEEEEECC---CCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeec-
Confidence 2458888876 43321 111111 224455666778998777766554 455666 2221223433221
Q ss_pred cccCCccccCCCcceEEEeeCCcEEEEec-----CeEEEEECCCCe---EEEec
Q 009420 190 VQTNDPRVENNLYPFVFLNVDGFLFIFAN-----NRAILFDYVNNK---VVKQY 235 (535)
Q Consensus 190 ~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-----~~~~~yDp~t~~---W~~~~ 235 (535)
..+ ...++ +.++|++|+..+ ....++|..+.. |...+
T Consensus 270 --~~~----~~~~~---~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 270 --GVG----AKYEV---HAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp --CSS----CCEEE---EEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred --CCC----ceEEE---EecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEe
Confidence 111 11222 237888666554 356778876644 66433
No 164
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.45 E-value=3.7 Score=40.85 Aligned_cols=167 Identities=10% Similarity=-0.016 Sum_probs=86.9
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCC-cccccceEEEec
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLG-ARRWYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L~ 157 (535)
.+.+||+++.+-..... +.......++-+||++++.|+. ..+.+++.. +.......... ....-.+++..+
T Consensus 158 ~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~----~~~~~~~~~---~~~~~~~~~~~~~~~~v~~v~fsp 229 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITG----SSLEVISTV---TGSCIARKTDFDKNWSLSKINFIA 229 (365)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECS----SCEEEEETT---TCCEEEEECCCCTTEEEEEEEEEE
T ss_pred EEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccc----eeEEEEEec---cCcceeeeecCCCCCCEEEEEEcC
Confidence 57899999877543321 2222233456689999999874 346677765 34332211111 111122455667
Q ss_pred CCcEEEEcCccCC---eeEEE-eCCCCCCeeee--ccccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCC
Q 009420 158 DGRIIIIGGRRQF---NYEFY-PKNGAPNVYSL--PFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNN 229 (535)
Q Consensus 158 dG~vyvvGG~~~~---~~E~y-P~~~~~~w~~~--~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~ 229 (535)
||+.++.++.+.. ....| .... ..... ..+..... . --.+...|||++++.|+ +.+.+||..+.
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~-----~-V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISIKSG--NTSVLRSKQVTNRFK-----G-ITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEEETT--EEEEEEEEEEESSCS-----C-EEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred CCCEEEEEecCCcceeEEeecccccc--eecceeeeeecCCCC-----C-eEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 9999998876542 12222 1110 11110 01111000 0 01234568999999886 46889999988
Q ss_pred eEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCC
Q 009420 230 KVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAP 276 (535)
Q Consensus 230 ~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~ 276 (535)
+-.+.+. .+ .. +...-+...| +++.++.|+.+
T Consensus 302 ~~~~~~~--~g---H~----~~V~~v~fSp------dg~~laS~S~D 333 (365)
T 4h5i_A 302 SMSKIFK--QA---HS----FAITEVTISP------DSTYVASVSAA 333 (365)
T ss_dssp EEEEEET--TS---SS----SCEEEEEECT------TSCEEEEEETT
T ss_pred cEEEEec--Cc---cc----CCEEEEEECC------CCCEEEEEeCC
Confidence 7543221 11 11 1111122222 88999998865
No 165
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.39 E-value=2.4 Score=40.83 Aligned_cols=176 Identities=10% Similarity=-0.037 Sum_probs=95.3
Q ss_pred cCCCceEEcccCC--CcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECc-cccccc
Q 009420 24 AAGGGWQLLQKSI--GISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLF-VQSNVW 100 (535)
Q Consensus 24 ~~~g~W~~l~~~~--~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~-~~~~~~ 100 (535)
+....++.+...+ ....-++....++++|+-.|.. +. ..+..+|++|++...-- .....|
T Consensus 26 ~~~~~~~vv~~~phd~~~ftqGL~~~~~~LyestG~~-g~----------------S~v~~vD~~Tgkv~~~~~l~~~~F 88 (262)
T 3nol_A 26 IPIYDYQIVHSYPHDTKAFTEGFFYRNGYFYESTGLN-GR----------------SSIRKVDIESGKTLQQIELGKRYF 88 (262)
T ss_dssp CCEEEEEEEEEEECCTTCEEEEEEEETTEEEEEEEET-TE----------------EEEEEECTTTCCEEEEEECCTTCC
T ss_pred CcccceEEEEEecCCCCcccceEEEECCEEEEECCCC-CC----------------ceEEEEECCCCcEEEEEecCCccc
Confidence 3445566654332 2223466666789999887743 21 36789999999975443 334556
Q ss_pred cccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE-eCCC
Q 009420 101 CSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNG 179 (535)
Q Consensus 101 c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~ 179 (535)
..+.+.. +++||+.-.. .+.+.+||+. +.+ .+...+.+--..+.+. .++++|+.-|. ..+.++ |.+.
T Consensus 89 geGit~~-g~~ly~ltw~---~~~v~v~D~~---t~~--~~~ti~~~~eG~glt~-dg~~L~~SdGs--~~i~~iDp~T~ 156 (262)
T 3nol_A 89 GEGISDW-KDKIVGLTWK---NGLGFVWNIR---NLR--QVRSFNYDGEGWGLTH-NDQYLIMSDGT--PVLRFLDPESL 156 (262)
T ss_dssp EEEEEEE-TTEEEEEESS---SSEEEEEETT---TCC--EEEEEECSSCCCCEEE-CSSCEEECCSS--SEEEEECTTTC
T ss_pred eeEEEEe-CCEEEEEEee---CCEEEEEECc---cCc--EEEEEECCCCceEEec-CCCEEEEECCC--CeEEEEcCCCC
Confidence 5554444 7899998554 3689999997 433 2222222211123332 23456666553 334555 5542
Q ss_pred CCCee-eeccccccCCccccCCCcceEEEeeCCcEEEEe--cCeEEEEECCCCeEEEec
Q 009420 180 APNVY-SLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFA--NNRAILFDYVNNKVVKQY 235 (535)
Q Consensus 180 ~~~w~-~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~g--g~~~~~yDp~t~~W~~~~ 235 (535)
+-. ..+.-.. . .+. .++......+|+||+.- .+.+.+.||++++....+
T Consensus 157 --~v~~~I~V~~~--g--~~~-~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 157 --TPVRTITVTAH--G--EEL-PELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGII 208 (262)
T ss_dssp --SEEEEEECEET--T--EEC-CCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEE
T ss_pred --eEEEEEEeccC--C--ccc-cccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 111 1111000 0 000 01111233499999764 356888999998876544
No 166
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=93.26 E-value=5.4 Score=37.36 Aligned_cols=133 Identities=14% Similarity=0.056 Sum_probs=70.0
Q ss_pred eeEEEECCCCCEEECccc-cccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCC-cccccceEEEe
Q 009420 79 HSVEYSVLTNEFRPLFVQ-SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLG-ARRWYATDHIL 156 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L 156 (535)
.+..||+. ++++..... ......+.++..+|++|+.... ...+.+||+. .+..... ++ ....-.+.+.-
T Consensus 84 ~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~----g~~~~~~-~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 84 KIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN---GDRIGKLTAD----GTIYEYD-LPNKGSYPAFITLG 154 (300)
T ss_dssp EEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT---TTEEEEECTT----SCEEEEE-CSSTTCCEEEEEEC
T ss_pred eEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC---CCeEEEECCC----CCEEEcc-CCCCCCCceeEEEC
Confidence 46789988 777655422 1122233445568999988643 2468889986 2333221 11 11112244555
Q ss_pred cCCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEE-EeeCCcEEEEe--cCeEEEEECCCCeEE
Q 009420 157 PDGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVF-LNVDGFLFIFA--NNRAILFDYVNNKVV 232 (535)
Q Consensus 157 ~dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~-~~~dG~ifv~g--g~~~~~yDp~t~~W~ 232 (535)
.+|++|+..... ..+..|.... +...... .. ...+|... .-++|+||+.. +..+.+||+ ++++.
T Consensus 155 ~~g~l~v~~~~~-~~i~~~~~~g--~~~~~~~-~~-------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 155 SDNALWFTENQN-NSIGRITNTG--KLEEYPL-PT-------NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEIS 221 (300)
T ss_dssp TTSSEEEEETTT-TEEEEECTTC--CEEEEEC-SS-------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCCEEEEecCC-CeEEEECCCC--cEEEeeC-CC-------CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEE
Confidence 689998865322 2344452221 2221111 00 11234443 34589999876 346889999 55544
No 167
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.24 E-value=5.8 Score=37.64 Aligned_cols=81 Identities=10% Similarity=-0.039 Sum_probs=47.2
Q ss_pred eeEEEECCCCCEEECccc----cccccccceecCC-CcEEEEcCCCCCCCeEEEEcCCCCCCCCceec-CCCC--cc-cc
Q 009420 79 HSVEYSVLTNEFRPLFVQ----SNVWCSSGAVRPD-GVLIQTGGFNDGEKKIRSFVPCNDESCDWKEI-DGLG--AR-RW 149 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~----~~~~c~~~~~l~d-G~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~-~~m~--~~-R~ 149 (535)
.+.+||+.+++++.+... ......+.+...+ |+||+.... ..+.+||+. .+...+ .... .+ ..
T Consensus 47 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~----~~l~~~d~~----g~~~~~~~~~~~~~~~~~ 118 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR----LGLLVVQTD----GTFEEIAKKDSEGRRMQG 118 (314)
T ss_dssp EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT----TEEEEEETT----SCEEECCSBCTTSCBCBC
T ss_pred EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC----CCEEEEeCC----CCEEEEEeccCCCccccC
Confidence 478999999998765431 1112223345567 899988642 368889985 233333 2111 11 11
Q ss_pred cceEEEecCCcEEEEcCc
Q 009420 150 YATDHILPDGRIIIIGGR 167 (535)
Q Consensus 150 y~s~~~L~dG~vyvvGG~ 167 (535)
-...+.-++|++|+....
T Consensus 119 ~~~i~~d~~g~l~v~~~~ 136 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPA 136 (314)
T ss_dssp CCEEEECTTSCEEEEECB
T ss_pred CcCEEECCCCCEEEEecC
Confidence 235566678999987643
No 168
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.17 E-value=2.2 Score=42.38 Aligned_cols=137 Identities=8% Similarity=0.023 Sum_probs=68.6
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCC-cEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCccc-ccceEEEe
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDG-VLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARR-WYATDHIL 156 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG-~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R-~y~s~~~L 156 (535)
.+.+||..+++-...-..+...-.+.++.+++ .+++.|+.+ ..+++||.. +.+-...-...... .-.+++..
T Consensus 150 ~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D---~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 150 CIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED---NRILLWDTR---CPKPASQIGCSAPGYLPTSLAWH 223 (344)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT---SCEEEEETT---SSSCEEECC----CCCEEEEEEC
T ss_pred eEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc---ccccccccc---ccceeeeeecceeeccceeeeec
Confidence 47899998876433222222222223344566 588888764 579999987 44322111111111 11133333
Q ss_pred c-CCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCC-cEEEEec--CeEEEEECCCCeE
Q 009420 157 P-DGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDG-FLFIFAN--NRAILFDYVNNKV 231 (535)
Q Consensus 157 ~-dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG-~ifv~gg--~~~~~yDp~t~~W 231 (535)
+ ++++++.|+.++ .+.+| .++. ..-..+. ...+ .--.+...|+| ++++.|+ ..+.+||..+++-
T Consensus 224 p~~~~~l~sg~~dg-~v~~wd~~~~-~~~~~~~---~h~~------~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 224 PQQSEVFVFGDENG-TVSLVDTKST-SCVLSSA---VHSQ------CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp SSCTTEEEEEETTS-EEEEEESCC---CCEEEE---CCSS------CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred CCCCcceEEeccCC-cEEEEECCCC-cEEEEEc---CCCC------CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 3 567888887654 56677 3321 1111111 1110 00122334677 5666664 4688999988764
Q ss_pred E
Q 009420 232 V 232 (535)
Q Consensus 232 ~ 232 (535)
.
T Consensus 293 ~ 293 (344)
T 4gqb_B 293 F 293 (344)
T ss_dssp E
T ss_pred E
Confidence 4
No 169
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=93.03 E-value=5.6 Score=39.22 Aligned_cols=58 Identities=12% Similarity=0.099 Sum_probs=36.6
Q ss_pred eEEccCCeEEEEcCCCCCCCCcccCCCCccc-cEEEeCCCCCCCce-eecCCC-CCCcccccceeecCCCcEEEecCCC
Q 009420 321 MTLLPNGNVLLINGAGKGTAGWELGRDPVLA-PVVYRPDNIPGSRF-DLQNPS-TIPRMYHSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 321 ~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~-~e~YDP~t~~g~~W-t~~~~~-~~~R~yhs~a~LlpDG~V~v~GG~~ 396 (535)
...-|||++++.|+.+ + + +.+||..+. +- ..+..- ..... ......|||+.+++|+..
T Consensus 201 ~~~s~~g~~l~s~s~d-~------------~~v~iwd~~~~---~~~~~~~~g~h~~~v--~~~~~s~~~~~l~s~s~d 261 (355)
T 3vu4_A 201 VRLNRKSDMVATCSQD-G------------TIIRVFKTEDG---VLVREFRRGLDRADV--VDMKWSTDGSKLAVVSDK 261 (355)
T ss_dssp EEECTTSSEEEEEETT-C------------SEEEEEETTTC---CEEEEEECTTCCSCE--EEEEECTTSCEEEEEETT
T ss_pred EEECCCCCEEEEEeCC-C------------CEEEEEECCCC---cEEEEEEcCCCCCcE--EEEEECCCCCEEEEEECC
Confidence 3456899999998865 2 5 789998876 32 222110 11111 134457999999999864
No 170
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=93.02 E-value=7.1 Score=38.04 Aligned_cols=94 Identities=15% Similarity=0.169 Sum_probs=51.2
Q ss_pred CCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCE-----EECcc--ccccccccceecCCCcEEEEcCCCC
Q 009420 48 NDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEF-----RPLFV--QSNVWCSSGAVRPDGVLIQTGGFND 120 (535)
Q Consensus 48 ~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w-----~~~~~--~~~~~c~~~~~l~dG~l~v~GG~~~ 120 (535)
++++++.|+.+ | .+.+||..+++- .+... .+.......++.+++++++.|+.+
T Consensus 38 d~~~l~sgs~D----------~---------~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D- 97 (343)
T 2xzm_R 38 DSPVLISGSRD----------K---------TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD- 97 (343)
T ss_dssp CCCEEEEEETT----------S---------CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT-
T ss_pred CCCEEEEEcCC----------C---------EEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC-
Confidence 77777777654 1 467888765431 11111 122222334456789999998874
Q ss_pred CCCeEEEEcCCCCCCCCceecCCCC-cccccceEEEecCCcEEEEcCcc
Q 009420 121 GEKKIRSFVPCNDESCDWKEIDGLG-ARRWYATDHILPDGRIIIIGGRR 168 (535)
Q Consensus 121 g~~~v~~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L~dG~vyvvGG~~ 168 (535)
..+++||.. +.+... .+. ....-.+++.-+||+.++.||.+
T Consensus 98 --~~v~lwd~~---~~~~~~--~~~~h~~~v~~v~~sp~~~~l~s~~~d 139 (343)
T 2xzm_R 98 --KTLRLWDLR---TGTTYK--RFVGHQSEVYSVAFSPDNRQILSAGAE 139 (343)
T ss_dssp --SEEEEEETT---SSCEEE--EEECCCSCEEEEEECSSTTEEEEEETT
T ss_pred --CcEEEEECC---CCcEEE--EEcCCCCcEEEEEECCCCCEEEEEcCC
Confidence 689999987 443211 111 01111234444567777766654
No 171
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.00 E-value=1.7 Score=43.58 Aligned_cols=139 Identities=14% Similarity=0.071 Sum_probs=73.1
Q ss_pred eeEEEECCCCCEEECc--cccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecC-CCCcccccceEEE
Q 009420 79 HSVEYSVLTNEFRPLF--VQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEID-GLGARRWYATDHI 155 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~--~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~-~m~~~R~y~s~~~ 155 (535)
.+.+||..+++....- ..+.....+.+..+||+++++|+.+ ..+++||+. +.+-...- ..........++.
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD---KRVRVIEPR---KGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT---SEEEEEETT---TTEEEEEEECSSCSSSCCEEEE
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC---CcEEEEeCC---CCceeeeeccCCCCCcceEEEE
Confidence 4789999888654332 2233333344566799999998863 679999987 43322110 1111111235566
Q ss_pred ecCCcEEEEcC--ccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEE-Eec--CeEEEEECCCCe
Q 009420 156 LPDGRIIIIGG--RRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFI-FAN--NRAILFDYVNNK 230 (535)
Q Consensus 156 L~dG~vyvvGG--~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv-~gg--~~~~~yDp~t~~ 230 (535)
.+||+++++|. .....+.+|.............+... ..--.....++|+.++ .|. ..+.+||..+++
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS-------SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCC-------SSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred cCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCC-------CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 77999999883 22235666632211111100000000 0011234456887654 553 467889887765
No 172
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.88 E-value=1.4 Score=43.19 Aligned_cols=98 Identities=8% Similarity=-0.007 Sum_probs=53.1
Q ss_pred CcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cC--CCCceeceeEEccCCeEEEEcCCCCCCCCc
Q 009420 266 AAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TM--PQPRVMGDMTLLPNGNVLLINGAGKGTAGW 342 (535)
Q Consensus 266 ~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m--~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~ 342 (535)
+++.++.|+.+. ++..+|+......++.. .+ ...... +...-|++++++.|+.+ +
T Consensus 118 ~g~~las~s~D~----------------~v~iwd~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~D-~---- 175 (330)
T 2hes_X 118 DGYYLATCSRDK----------------SVWIWETDESGEEYECISVLQEHSQDVK-HVIWHPSEALLASSSYD-D---- 175 (330)
T ss_dssp TSCEEEEEETTS----------------CEEEEECCTTCCCCEEEEEECCCSSCEE-EEEECSSSSEEEEEETT-S----
T ss_pred CCCEEEEEeCCC----------------EEEEEeccCCCCCeEEEEEeccCCCceE-EEEECCCCCEEEEEcCC-C----
Confidence 677888887652 23455553222334432 22 222222 23445899999998865 2
Q ss_pred ccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCC--CcEEEecCCC
Q 009420 343 ELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRD--GRVLVGGSNP 396 (535)
Q Consensus 343 ~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpD--G~V~v~GG~~ 396 (535)
++.+||..++ .|+.+..+.-....-......|| +..++.|+..
T Consensus 176 --------~i~iW~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 176 --------TVRIWKDYDD---DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD 220 (330)
T ss_dssp --------CEEEEEEETT---EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT
T ss_pred --------eEEEEECCCC---CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC
Confidence 5688998777 77654332211110112334577 6778888754
No 173
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.69 E-value=4.7 Score=41.01 Aligned_cols=154 Identities=11% Similarity=0.067 Sum_probs=85.7
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeE
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKI 125 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v 125 (535)
-++|+.+++++.+.+ ...+.+||..+++...+.... ....+.++-+||+.+++.+..++...+
T Consensus 187 Spdg~~la~~s~~~~----------------~~~i~~~d~~tg~~~~l~~~~-~~~~~~~~spdg~~la~~~~~~g~~~i 249 (415)
T 2hqs_A 187 SPDGSKLAYVTFESG----------------RSALVIQTLANGAVRQVASFP-RHNGAPAFSPDGSKLAFALSKTGSLNL 249 (415)
T ss_dssp CTTSSEEEEEECTTS----------------SCEEEEEETTTCCEEEEECCS-SCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred cCCCCEEEEEEecCC----------------CcEEEEEECCCCcEEEeecCC-CcccCEEEcCCCCEEEEEEecCCCceE
Confidence 367877777664311 136789999999887654322 223344567899966644443455679
Q ss_pred EEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCC--eeEEEeCCCCCCeeeeccccccCCccccCCCcc
Q 009420 126 RSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQF--NYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYP 203 (535)
Q Consensus 126 ~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~--~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp 203 (535)
.+||.. +.+...+..-. ......+.-+||+.++++..... .+..+.... .....+.. ...+.
T Consensus 250 ~~~d~~---~~~~~~l~~~~--~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~-~~~~~l~~----------~~~~~ 313 (415)
T 2hqs_A 250 YVMDLA---SGQIRQVTDGR--SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING-GAPQRITW----------EGSQN 313 (415)
T ss_dssp EEEETT---TCCEEECCCCS--SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-SCCEECCC----------SSSEE
T ss_pred EEEECC---CCCEEeCcCCC--CcccceEECCCCCEEEEEECCCCCcEEEEEECCC-CCEEEEec----------CCCcc
Confidence 999998 66655544322 12224455678986666554322 233333221 11111110 00111
Q ss_pred -eEEEeeCCcEEEEec-----CeEEEEECCCCeEE
Q 009420 204 -FVFLNVDGFLFIFAN-----NRAILFDYVNNKVV 232 (535)
Q Consensus 204 -~~~~~~dG~ifv~gg-----~~~~~yDp~t~~W~ 232 (535)
.....|||+.++++. ..+.++|..+++..
T Consensus 314 ~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 314 QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp EEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred cCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 234567998666654 25788999888765
No 174
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.67 E-value=7.6 Score=37.44 Aligned_cols=79 Identities=16% Similarity=0.094 Sum_probs=44.1
Q ss_pred eEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCC
Q 009420 41 MHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFND 120 (535)
Q Consensus 41 ~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~ 120 (535)
...++-++|+||+.+-.+ + .+..||+..+. ....... ..-.+.++..||++||.....+
T Consensus 35 egia~~~~g~lyv~d~~~----------~---------~I~~~d~~g~~-~~~~~~~-~~p~gia~~~dG~l~vad~~~~ 93 (306)
T 2p4o_A 35 ENLASAPDGTIFVTNHEV----------G---------EIVSITPDGNQ-QIHATVE-GKVSGLAFTSNGDLVATGWNAD 93 (306)
T ss_dssp EEEEECTTSCEEEEETTT----------T---------EEEEECTTCCE-EEEEECS-SEEEEEEECTTSCEEEEEECTT
T ss_pred ceEEECCCCCEEEEeCCC----------C---------eEEEECCCCce-EEEEeCC-CCceeEEEcCCCcEEEEeccCC
Confidence 334444689999887421 1 46788887643 2221111 1223445567899998753221
Q ss_pred CCCeEEEEcCCCCCCCCceecCCC
Q 009420 121 GEKKIRSFVPCNDESCDWKEIDGL 144 (535)
Q Consensus 121 g~~~v~~ydp~~~~~~~W~~~~~m 144 (535)
...+..||+. +.+.+.+..+
T Consensus 94 -~~~v~~~d~~---~g~~~~~~~~ 113 (306)
T 2p4o_A 94 -SIPVVSLVKS---DGTVETLLTL 113 (306)
T ss_dssp -SCEEEEEECT---TSCEEEEEEC
T ss_pred -cceEEEEcCC---CCeEEEEEeC
Confidence 1347778876 5665544433
No 175
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.64 E-value=4.3 Score=39.19 Aligned_cols=157 Identities=9% Similarity=-0.021 Sum_probs=85.0
Q ss_pred eEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCC
Q 009420 41 MHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFND 120 (535)
Q Consensus 41 ~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~ 120 (535)
-++....++++|+-.|.. | .+..+|++|++...--.....|..+. .+.+++||++...
T Consensus 57 tqGL~~~~~~Ly~stG~~----------g---------~v~~iD~~Tgkv~~~~l~~~~FgeGi-t~~g~~Ly~ltw~-- 114 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQ----------G---------TLRQLSLESAQPVWMERLGNIFAEGL-ASDGERLYQLTWT-- 114 (268)
T ss_dssp EEEEEEETTEEEEEETTT----------T---------EEEECCSSCSSCSEEEECTTCCEEEE-EECSSCEEEEESS--
T ss_pred cceEEEECCEEEEEcCCC----------C---------EEEEEECCCCcEEeEECCCCcceeEE-EEeCCEEEEEEcc--
Confidence 355666688888777642 2 37889999998643323334455554 4457899998544
Q ss_pred CCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCee-eeccccccCCcccc
Q 009420 121 GEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVY-SLPFLVQTNDPRVE 198 (535)
Q Consensus 121 g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~ 198 (535)
.+.+.+||+. +. +.+...+.+--..+.+.- ++++|+.-|. ....++ |.+. +-. ..+.- ... .+
T Consensus 115 -~~~v~V~D~~---Tl--~~~~ti~~~~eGwGLt~D-g~~L~vSdGs--~~l~~iDp~T~--~v~~~I~V~--~~g--~~ 179 (268)
T 3nok_A 115 -EGLLFTWSGM---PP--QRERTTRYSGEGWGLCYW-NGKLVRSDGG--TMLTFHEPDGF--ALVGAVQVK--LRG--QP 179 (268)
T ss_dssp -SCEEEEEETT---TT--EEEEEEECSSCCCCEEEE-TTEEEEECSS--SEEEEECTTTC--CEEEEEECE--ETT--EE
T ss_pred -CCEEEEEECC---cC--cEEEEEeCCCceeEEecC-CCEEEEECCC--CEEEEEcCCCC--eEEEEEEeC--CCC--cc
Confidence 3689999987 33 223222222111233432 4567776653 244455 5542 111 11110 000 00
Q ss_pred CCCcceEEEeeCCcEEEEe--cCeEEEEECCCCeEEEec
Q 009420 199 NNLYPFVFLNVDGFLFIFA--NNRAILFDYVNNKVVKQY 235 (535)
Q Consensus 199 ~~~yp~~~~~~dG~ifv~g--g~~~~~yDp~t~~W~~~~ 235 (535)
-.+..-....+|+||+.- .+.+.+.||++++....+
T Consensus 180 -v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 180 -VELINELECANGVIYANIWHSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp -CCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEE
T ss_pred -cccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEE
Confidence 001112233499999754 356788999998866433
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=92.56 E-value=7.2 Score=36.95 Aligned_cols=111 Identities=13% Similarity=0.086 Sum_probs=64.3
Q ss_pred CCceEEcccCCCcceeEEEEeeCCe-EEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccc
Q 009420 26 GGGWQLLQKSIGISSMHMQLLNNDR-VVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSG 104 (535)
Q Consensus 26 ~g~W~~l~~~~~~~~~~~~~~~~gk-v~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~ 104 (535)
..+++.+..- .......+.-++|+ +|+.+..+ ..+..||+.++ .+.+... .....+.
T Consensus 17 ~~~~~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~-------------------~~i~~~~~~~~-~~~~~~~-~~~~~~l 74 (296)
T 3e5z_A 17 GAEARRLADG-FTWTEGPVYVPARSAVIFSDVRQ-------------------NRTWAWSDDGQ-LSPEMHP-SHHQNGH 74 (296)
T ss_dssp TCCCEEEECC-CSSEEEEEEEGGGTEEEEEEGGG-------------------TEEEEEETTSC-EEEEESS-CSSEEEE
T ss_pred CCcEEEEecC-CccccCCeEeCCCCEEEEEeCCC-------------------CEEEEEECCCC-eEEEECC-CCCccee
Confidence 3455665431 12223333346776 88877532 14789999988 6555422 1222334
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCC-c--ccccceEEEecCCcEEEE
Q 009420 105 AVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLG-A--RRWYATDHILPDGRIIII 164 (535)
Q Consensus 105 ~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~-~--~R~y~s~~~L~dG~vyvv 164 (535)
++-+||++|+.... ...+.+||+. +.+.+.+.... . ...-...+.-+||++|+.
T Consensus 75 ~~~~dg~l~v~~~~---~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 75 CLNKQGHLIACSHG---LRRLERQREP---GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp EECTTCCEEEEETT---TTEEEEECST---TCCEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred eECCCCcEEEEecC---CCeEEEEcCC---CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 45579999887532 2579999997 66665543211 1 111235667779999997
No 177
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.38 E-value=6.2 Score=37.99 Aligned_cols=159 Identities=7% Similarity=-0.060 Sum_probs=87.0
Q ss_pred EEEEe-eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECc-cccccccccceecCCCcEEEEcCCC
Q 009420 42 HMQLL-NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLF-VQSNVWCSSGAVRPDGVLIQTGGFN 119 (535)
Q Consensus 42 ~~~~~-~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~-~~~~~~c~~~~~l~dG~l~v~GG~~ 119 (535)
|...+ ++|++|+-.|.. + ...+.++|++|++-...- .....|..+.+. .+++||+..-.
T Consensus 24 ~Gl~~~~dg~Lyvstg~~-~----------------~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~-~g~~lyv~t~~- 84 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY-G----------------RSSVRQVALQTGKVENIHKMDDSYFGEGLTL-LNEKLYQVVWL- 84 (266)
T ss_dssp EEEEECSTTEEEEEECST-T----------------TCEEEEEETTTCCEEEEEECCTTCCEEEEEE-ETTEEEEEETT-
T ss_pred ccEEEeCCCeEEEECCCC-C----------------CCEEEEEECCCCCEEEEEecCCCcceEEEEE-eCCEEEEEEec-
Confidence 55555 458999887632 1 136889999999976532 333445554433 36799998643
Q ss_pred CCCCeEEEEcCCCCCCCCceecCCCCcc-cccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccc
Q 009420 120 DGEKKIRSFVPCNDESCDWKEIDGLGAR-RWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRV 197 (535)
Q Consensus 120 ~g~~~v~~ydp~~~~~~~W~~~~~m~~~-R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~ 197 (535)
.+.+.+||+. +. +.+..++.+ --..+.+ -.++++|+.-|. ..+.++ |.+. ..-...+.- ...
T Consensus 85 --~~~v~viD~~---t~--~v~~~i~~g~~~g~glt-~Dg~~l~vs~gs--~~l~viD~~t~-~v~~~I~Vg--~~~--- 148 (266)
T 2iwa_A 85 --KNIGFIYDRR---TL--SNIKNFTHQMKDGWGLA-TDGKILYGSDGT--SILYEIDPHTF-KLIKKHNVK--YNG--- 148 (266)
T ss_dssp --CSEEEEEETT---TT--EEEEEEECCSSSCCEEE-ECSSSEEEECSS--SEEEEECTTTC-CEEEEEECE--ETT---
T ss_pred --CCEEEEEECC---CC--cEEEEEECCCCCeEEEE-ECCCEEEEECCC--CeEEEEECCCC-cEEEEEEEC--CCC---
Confidence 3679999987 43 233322221 1011222 223578887653 244455 5542 111111110 000
Q ss_pred cCCCcceEEEeeCCcEEEEe--cCeEEEEECCCCeEEEec
Q 009420 198 ENNLYPFVFLNVDGFLFIFA--NNRAILFDYVNNKVVKQY 235 (535)
Q Consensus 198 ~~~~yp~~~~~~dG~ifv~g--g~~~~~yDp~t~~W~~~~ 235 (535)
..-.+|......+|+||+.- .+.+.+.|+++++....+
T Consensus 149 ~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I 188 (266)
T 2iwa_A 149 HRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWI 188 (266)
T ss_dssp EECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEE
T ss_pred cccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEE
Confidence 00012334444599999765 367889999998876544
No 178
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.82 E-value=9.6 Score=36.72 Aligned_cols=68 Identities=6% Similarity=0.030 Sum_probs=43.5
Q ss_pred ecCCcEEEEcCccCCeeEEE-eCCCCCCee-eeccccccCCccccCCCcceEEEeeCCcEEEEe--cCeEEEEECCCCeE
Q 009420 156 LPDGRIIIIGGRRQFNYEFY-PKNGAPNVY-SLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFA--NNRAILFDYVNNKV 231 (535)
Q Consensus 156 L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~-~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~g--g~~~~~yDp~t~~W 231 (535)
+.++++|+..|.++. +..+ +++. +-. .. +.. ..|.......+++||+.. ++.+.+||+++.+-
T Consensus 62 ~~~~~Ly~stG~~g~-v~~iD~~Tg--kv~~~~--l~~--------~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 62 FHQGHFFESTGHQGT-LRQLSLESA--QPVWME--RLG--------NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp EETTEEEEEETTTTE-EEECCSSCS--SCSEEE--ECT--------TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEE
T ss_pred EECCEEEEEcCCCCE-EEEEECCCC--cEEeEE--CCC--------CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcE
Confidence 347899999998754 5556 5442 211 11 211 223444556678999987 46789999999887
Q ss_pred EEecC
Q 009420 232 VKQYP 236 (535)
Q Consensus 232 ~~~~p 236 (535)
...++
T Consensus 129 ~~ti~ 133 (268)
T 3nok_A 129 ERTTR 133 (268)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76554
No 179
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.80 E-value=5.9 Score=40.14 Aligned_cols=50 Identities=8% Similarity=-0.021 Sum_probs=29.3
Q ss_pred eeEEEECCC--------CCEEECcc--ccccccccceecCCCc-EEEEcCCCCCCCeEEEEcCC
Q 009420 79 HSVEYSVLT--------NEFRPLFV--QSNVWCSSGAVRPDGV-LIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 79 ~~~~yDp~t--------~~w~~~~~--~~~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~ 131 (535)
.+.+||..+ ++..++.. .+.....+....+++. ++++|+.+ ..+.+||..
T Consensus 152 ~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d---g~i~vwd~~ 212 (430)
T 2xyi_A 152 DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD---HTICLWDIN 212 (430)
T ss_dssp CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT---SCEEEEETT
T ss_pred cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC---CeEEEEeCC
Confidence 467888765 22333321 1222223344566777 88888763 568899987
No 180
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=91.31 E-value=8.2 Score=39.25 Aligned_cols=90 Identities=8% Similarity=-0.188 Sum_probs=51.5
Q ss_pred eeEEEECCCCCEEEC-ccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCC-------------
Q 009420 79 HSVEYSVLTNEFRPL-FVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGL------------- 144 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~-~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m------------- 144 (535)
.+.+||..+++.... ...+.....+.++. ||++++.|+.+ ..+.+||.. +.+....-.+
T Consensus 221 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d---~~v~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~ 293 (450)
T 2vdu_B 221 HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD---DKIFAWDWK---TGKNLSTFDYNSLIKPYLNDQHL 293 (450)
T ss_dssp CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS---SEEEEEETT---TCCEEEEEECHHHHGGGCCTTSB
T ss_pred cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC---CeEEEEECC---CCcEeeeecchhhhhhhhhhccc
Confidence 467888887764332 11222222333455 99999999863 578999987 4442211010
Q ss_pred -----------CcccccceEEEecCCcEEEEcCccCCeeEEE
Q 009420 145 -----------GARRWYATDHILPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 145 -----------~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 175 (535)
.....-...+..+||+.+++++.....+.+|
T Consensus 294 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 294 APPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp C----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred ccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 1112223455667888888877555567777
No 181
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.08 E-value=3.1 Score=39.90 Aligned_cols=139 Identities=12% Similarity=0.129 Sum_probs=67.4
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPD 158 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~d 158 (535)
.+.+||..+.+.......+.....+.++.+||+++++|+.+ ..+.+||.. + +..+..+.....-.+.+..++
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---g~i~iwd~~---~--~~~~~~~~~~~~v~~~~~~~~ 267 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD---GQAMLWDLN---E--GKHLYTLDGGDIINALCFSPN 267 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---CEEEEEETT---T--TEEEEEEECSSCEEEEEECSS
T ss_pred EEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCC---CeEEEEEec---c--CceeeeecCCceEEeeecCCC
Confidence 46788988876544332232223334566899999999874 578999976 3 233332322222223344444
Q ss_pred CcEEEEcCccCCeeEEEeCCCCCCee-eec--cccccCCccccCCCcceEEEeeCCcEEEEec--CeEEEEECCCCe
Q 009420 159 GRIIIIGGRRQFNYEFYPKNGAPNVY-SLP--FLVQTNDPRVENNLYPFVFLNVDGFLFIFAN--NRAILFDYVNNK 230 (535)
Q Consensus 159 G~vyvvGG~~~~~~E~yP~~~~~~w~-~~~--~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg--~~~~~yDp~t~~ 230 (535)
+.+ ++++.+ ..+.+|..... ... .+. ........ ....--.+...+||+.++.|+ ..+.+||.++++
T Consensus 268 ~~~-~~~~~d-~~i~iwd~~~~-~~~~~~~~~~~~~~~~~--h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 268 RYW-LCAATG-PSIKIWDLEGK-IIVDELKQEVISTSSKA--EPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp SSE-EEEEET-TEEEEEETTTT-EEEEEECCC-------C--CCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred Cce-eeccCC-CEEEEEECCCC-eEEEeccccceeeeccC--CCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 444 445543 34555522210 100 010 00000000 000000123457999888876 357888887764
No 182
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=91.02 E-value=8 Score=42.08 Aligned_cols=115 Identities=15% Similarity=0.108 Sum_probs=63.0
Q ss_pred eecCCCcEEEEcCCCCC---CCeEEEEcCCCCCCCCceecCCCCc----------------cc-------ccceEEEecC
Q 009420 105 AVRPDGVLIQTGGFNDG---EKKIRSFVPCNDESCDWKEIDGLGA----------------RR-------WYATDHILPD 158 (535)
Q Consensus 105 ~~l~dG~l~v~GG~~~g---~~~v~~ydp~~~~~~~W~~~~~m~~----------------~R-------~y~s~~~L~d 158 (535)
+..+||+.+++++..++ ...++++|.. +.+...+..... .| ...+.+.-+|
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpD 119 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIG---SGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPD 119 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETT---TCCEEEEECGGGTC--------------------CCEESCCCEECTT
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECC---CCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCC
Confidence 45679998888765332 2478999987 666554432110 01 1234566679
Q ss_pred CcEEEEcCccCCeeEEEeCCCCC--CeeeeccccccCCccccCCCcceEEEeeCCcEEEE-ecCeEEEEECCCCeEEE
Q 009420 159 GRIIIIGGRRQFNYEFYPKNGAP--NVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIF-ANNRAILFDYVNNKVVK 233 (535)
Q Consensus 159 G~vyvvGG~~~~~~E~yP~~~~~--~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~-gg~~~~~yDp~t~~W~~ 233 (535)
|+.++++.. ..+.+|...... ....+. ... ..--.....|||+.+++ .++.+.++|..+++..+
T Consensus 120 g~~l~~~~~--~~i~~~d~~~~~~~~~~~l~---~~~------~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 120 AQRLLFPLG--GELYLYDLKQEGKAAVRQLT---HGE------GFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQ 186 (741)
T ss_dssp SSEEEEEET--TEEEEEESSSCSTTSCCBCC---CSS------SCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEE
T ss_pred CCEEEEEeC--CcEEEEECCCCCcceEEEcc---cCC------cccccccCCCCCCEEEEEeCCcEEEEecCCCCEEE
Confidence 987777654 445556332110 111110 000 00112355689985554 45678999999887653
No 183
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=90.64 E-value=12 Score=35.68 Aligned_cols=63 Identities=11% Similarity=0.130 Sum_probs=40.7
Q ss_pred eeCCe-EEEEecCCCCCCCCCCCCCccccCCCCceeEEEEC-CCCCEEECccc-cccccccceecCCCcEEEEcCCCCCC
Q 009420 46 LNNDR-VVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSV-LTNEFRPLFVQ-SNVWCSSGAVRPDGVLIQTGGFNDGE 122 (535)
Q Consensus 46 ~~~gk-v~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp-~t~~w~~~~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~ 122 (535)
.++++ .++.|+.+ | .+.+||. .+++...+... +.....+..+.+ +.++++|+.+
T Consensus 65 ~~~~~~~l~~~~~d----------g---------~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d--- 121 (342)
T 1yfq_A 65 IDNTDLQIYVGTVQ----------G---------EILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWD--- 121 (342)
T ss_dssp EESSSEEEEEEETT----------S---------CEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETT---
T ss_pred CCCCCcEEEEEcCC----------C---------eEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCC---
Confidence 35888 77777643 2 4789999 88887666531 222222333455 7888888763
Q ss_pred CeEEEEcCC
Q 009420 123 KKIRSFVPC 131 (535)
Q Consensus 123 ~~v~~ydp~ 131 (535)
..+.+||..
T Consensus 122 ~~i~iwd~~ 130 (342)
T 1yfq_A 122 GLIEVIDPR 130 (342)
T ss_dssp SEEEEECHH
T ss_pred CeEEEEccc
Confidence 578999875
No 184
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.53 E-value=5.9 Score=37.94 Aligned_cols=145 Identities=13% Similarity=0.123 Sum_probs=75.2
Q ss_pred eeEEEECCCCCEEECccc----cccccccceecCCCcEEEEc-CCC-------CCCCeEEEEcCCCCCCCCceecC-CCC
Q 009420 79 HSVEYSVLTNEFRPLFVQ----SNVWCSSGAVRPDGVLIQTG-GFN-------DGEKKIRSFVPCNDESCDWKEID-GLG 145 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~----~~~~c~~~~~l~dG~l~v~G-G~~-------~g~~~v~~ydp~~~~~~~W~~~~-~m~ 145 (535)
.+.+||+++++++.+... ...+....++.++|++|+.- +.. .....+.++|+. . +...+. .+.
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~---g-~~~~~~~~~~ 149 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD---H-HVKKYFDQVD 149 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT---S-CEEEEEEEES
T ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC---C-CEEEEeeccc
Confidence 367899999998876532 12233445567899988853 111 122467788875 2 222221 222
Q ss_pred cccccceEEEecCCc-EEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEE-EeeCCcEEEEe--cCe
Q 009420 146 ARRWYATDHILPDGR-IIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVF-LNVDGFLFIFA--NNR 220 (535)
Q Consensus 146 ~~R~y~s~~~L~dG~-vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~-~~~dG~ifv~g--g~~ 220 (535)
.+ .+.+.-+||+ +|+.... ...+..| .............+... . ....+|... +-++|+||+.. +..
T Consensus 150 ~p---ngi~~spdg~~lyv~~~~-~~~i~~~~~d~~~G~~~~~~~~~~~-~---~~~~~p~g~~~d~~G~lwva~~~~~~ 221 (297)
T 3g4e_A 150 IS---NGLDWSLDHKIFYYIDSL-SYSVDAFDYDLQTGQISNRRSVYKL-E---KEEQIPDGMCIDAEGKLWVACYNGGR 221 (297)
T ss_dssp BE---EEEEECTTSCEEEEEEGG-GTEEEEEEECTTTCCEEEEEEEEEC-C---GGGCEEEEEEEBTTSCEEEEEETTTE
T ss_pred cc---cceEEcCCCCEEEEecCC-CCcEEEEeccCCCCcccCcEEEEEC-C---CCCCCCCeeEECCCCCEEEEEcCCCE
Confidence 22 2455666886 5665433 2345555 21111111100000000 0 011245443 44689999875 456
Q ss_pred EEEEECCCCeEEEec
Q 009420 221 AILFDYVNNKVVKQY 235 (535)
Q Consensus 221 ~~~yDp~t~~W~~~~ 235 (535)
+.+||+++++....+
T Consensus 222 v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTV 236 (297)
T ss_dssp EEEECTTTCCEEEEE
T ss_pred EEEEcCCCceEEEEE
Confidence 899999977755433
No 185
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.48 E-value=4.2 Score=39.21 Aligned_cols=110 Identities=7% Similarity=0.068 Sum_probs=59.3
Q ss_pred ceecCC---CcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCc-ccccceEEEecCCcEEEEcCccCCeeEEEeCCC
Q 009420 104 GAVRPD---GVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGA-RRWYATDHILPDGRIIIIGGRRQFNYEFYPKNG 179 (535)
Q Consensus 104 ~~~l~d---G~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~-~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~ 179 (535)
.++-++ |+++++|+.+ ..+.+||.. +........+.. ...-.+++..+||+.+++|+.++ .+.+|....
T Consensus 45 ~~~~~~~~~g~~l~~~~~d---g~i~iw~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-~v~iwd~~~ 117 (368)
T 3mmy_A 45 LSFSPPTLPGNFLIAGSWA---NDVRCWEVQ---DSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK-TAKMWDLSS 117 (368)
T ss_dssp EEECCTTSSSEEEEEEETT---SEEEEEEEC---TTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS-EEEEEETTT
T ss_pred EEEcCCCCCceEEEEECCC---CcEEEEEcC---CCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC-cEEEEEcCC
Confidence 345566 6999998864 578999987 422222111211 11122455566899888887764 566663221
Q ss_pred CCCeeeeccccccCCccccCCCcceEEE--eeCCcEEEEec--CeEEEEECCCCe
Q 009420 180 APNVYSLPFLVQTNDPRVENNLYPFVFL--NVDGFLFIFAN--NRAILFDYVNNK 230 (535)
Q Consensus 180 ~~~w~~~~~l~~~~~~~~~~~~yp~~~~--~~dG~ifv~gg--~~~~~yDp~t~~ 230 (535)
...... . .... ... .... .++|++++.++ ..+.+||..+++
T Consensus 118 -~~~~~~--~-~~~~-----~v~-~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 118 -NQAIQI--A-QHDA-----PVK-TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp -TEEEEE--E-ECSS-----CEE-EEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred -CCceee--c-cccC-----ceE-EEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 111111 1 1000 001 1122 56888888775 467889988765
No 186
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=90.32 E-value=15 Score=37.26 Aligned_cols=52 Identities=10% Similarity=-0.052 Sum_probs=32.0
Q ss_pred ceeEEEECCCCCEEE-Ccccc------ccccccceecCCCc-EEEEcCCCCCCCeEEEEcCC
Q 009420 78 AHSVEYSVLTNEFRP-LFVQS------NVWCSSGAVRPDGV-LIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 78 ~~~~~yDp~t~~w~~-~~~~~------~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~ 131 (535)
..+.+||+.|++-.. ++... .......++.+||+ +||.... ...++.+.|..
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~--~~~~VsVID~~ 168 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS--PAPAVGVVDLE 168 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS--SSCEEEEEETT
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC--CCCeEEEEECC
Confidence 358899999998543 33221 12344556778987 5555321 13678899987
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=89.96 E-value=10 Score=40.55 Aligned_cols=48 Identities=15% Similarity=0.026 Sum_probs=30.1
Q ss_pred eeEEEECCCCCEEE-CccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCC
Q 009420 79 HSVEYSVLTNEFRP-LFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 79 ~~~~yDp~t~~w~~-~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 131 (535)
.+.++|+.|++... ++.... -++.++.+||+.+.+++. + ..+.+||..
T Consensus 178 ~V~viD~~t~~v~~~i~~g~~--p~~v~~SpDGr~lyv~~~-d--g~V~viD~~ 226 (567)
T 1qks_A 178 QIALIDGSTYEIKTVLDTGYA--VHISRLSASGRYLFVIGR-D--GKVNMIDLW 226 (567)
T ss_dssp EEEEEETTTCCEEEEEECSSC--EEEEEECTTSCEEEEEET-T--SEEEEEETT
T ss_pred eEEEEECCCCeEEEEEeCCCC--ccceEECCCCCEEEEEcC-C--CeEEEEECC
Confidence 68899999987653 332222 224456679885555443 2 479999984
No 188
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=89.32 E-value=26 Score=38.64 Aligned_cols=135 Identities=10% Similarity=0.025 Sum_probs=75.9
Q ss_pred eEEEECCCCCEEECcccc-----ccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecC---CCCcccccc
Q 009420 80 SVEYSVLTNEFRPLFVQS-----NVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEID---GLGARRWYA 151 (535)
Q Consensus 80 ~~~yDp~t~~w~~~~~~~-----~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~---~m~~~R~y~ 151 (535)
..+||+.+++|+...... .....+.....+|+|++..-. ..+.+||+. +.+++... .++... -.
T Consensus 471 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~----~Gl~~~~~~---~~~~~~~~~~~~l~~~~-i~ 542 (781)
T 3v9f_A 471 VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG----GGVGIYTPD---MQLVRKFNQYEGFCSNT-IN 542 (781)
T ss_dssp EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS----SCEEEECTT---CCEEEEECTTTTCSCSC-EE
T ss_pred eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC----CCEEEEeCC---CCeEEEccCCCCCCCCe-eE
Confidence 578999999887654221 122233344568888875321 236789998 77776654 233222 12
Q ss_pred eEEEecCCcEEEEcCccCCee-EEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecCeEEEEECCCC
Q 009420 152 TDHILPDGRIIIIGGRRQFNY-EFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNN 229 (535)
Q Consensus 152 s~~~L~dG~vyvvGG~~~~~~-E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~~~~yDp~t~ 229 (535)
+.+.-.+|+|++... ... -.| |.+. +....... +. .+.+..-....-.+|+||+.+.+...+|||++.
T Consensus 543 ~i~~d~~g~lWi~T~---~Glv~~~d~~~~--~~~~~~~~----~g-l~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~~ 612 (781)
T 3v9f_A 543 QIYRSSKGQMWLATG---EGLVCFPSARNF--DYQVFQRK----EG-LPNTHIRAISEDKNGNIWASTNTGISCYITSKK 612 (781)
T ss_dssp EEEECTTSCEEEEET---TEEEEESCTTTC--CCEEECGG----GT-CSCCCCCEEEECSSSCEEEECSSCEEEEETTTT
T ss_pred EEEECCCCCEEEEEC---CCceEEECCCCC--cEEEcccc----CC-CCCceEEEEEECCCCCEEEEcCCceEEEECCCC
Confidence 344445788888532 123 445 4432 22221110 00 111112233444589999998888999999999
Q ss_pred eEE
Q 009420 230 KVV 232 (535)
Q Consensus 230 ~W~ 232 (535)
++.
T Consensus 613 ~~~ 615 (781)
T 3v9f_A 613 CFY 615 (781)
T ss_dssp EEE
T ss_pred ceE
Confidence 876
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=89.23 E-value=16 Score=35.00 Aligned_cols=142 Identities=7% Similarity=-0.026 Sum_probs=73.2
Q ss_pred eeEEEECCCCCEEEC-c-cccccccccceecCCCcEEEEcCCC---CCCCeEEEEcCCCCCCCCceecCCCCcccccceE
Q 009420 79 HSVEYSVLTNEFRPL-F-VQSNVWCSSGAVRPDGVLIQTGGFN---DGEKKIRSFVPCNDESCDWKEIDGLGARRWYATD 153 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~-~-~~~~~~c~~~~~l~dG~l~v~GG~~---~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~ 153 (535)
.+.+||+.+++.+.+ . ..........++.++|++|+..... +....+.+||+. +.+...+.. ......+.
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~--~~~~~~~i 187 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD---FRTVTPIIQ--NISVANGI 187 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT---SCCEEEEEE--EESSEEEE
T ss_pred eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC---CCEEEEeec--CCCcccce
Confidence 578899998887633 2 1112222334566799999875431 123568889987 555544321 11112344
Q ss_pred EEecCCc-EEEEcCccCCeeEEE-eCCCCCCeeeec-cccccCCccccCCCcceE-EEeeCCcEEEEe--cCeEEEEECC
Q 009420 154 HILPDGR-IIIIGGRRQFNYEFY-PKNGAPNVYSLP-FLVQTNDPRVENNLYPFV-FLNVDGFLFIFA--NNRAILFDYV 227 (535)
Q Consensus 154 ~~L~dG~-vyvvGG~~~~~~E~y-P~~~~~~w~~~~-~l~~~~~~~~~~~~yp~~-~~~~dG~ifv~g--g~~~~~yDp~ 227 (535)
+.-+||+ +|+... ....+.+| ...+........ ...... .....|.. ..-++|+||+.. +..+.+||++
T Consensus 188 ~~~~dg~~l~v~~~-~~~~i~~~d~~~~g~~~~~~~~~~~~~~----~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 188 ALSTDEKVLWVTET-TANRLHRIALEDDGVTIQPFGATIPYYF----TGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EECTTSSEEEEEEG-GGTEEEEEEECTTSSSEEEEEEEEEEEC----CSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred EECCCCCEEEEEeC-CCCeEEEEEecCCCcCcccccceEEEec----CCCCCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 5556886 666543 22345666 432211111110 000000 00013333 445689999876 4578899996
Q ss_pred CCe
Q 009420 228 NNK 230 (535)
Q Consensus 228 t~~ 230 (535)
...
T Consensus 263 g~~ 265 (333)
T 2dg1_A 263 GYP 265 (333)
T ss_dssp SCE
T ss_pred CCE
Confidence 544
No 190
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=88.73 E-value=18 Score=34.89 Aligned_cols=80 Identities=8% Similarity=0.025 Sum_probs=42.8
Q ss_pred eeEEEECCCCCEEECcccc-------------------ccccccceecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCCc
Q 009420 79 HSVEYSVLTNEFRPLFVQS-------------------NVWCSSGAVRP-DGVLIQTGGFNDGEKKIRSFVPCNDESCDW 138 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~-------------------~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W 138 (535)
.+..||+.+++++...... ...-.+.++.. +|+|||.-.. ..+.+||+. +.+.
T Consensus 41 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~----~~i~~~d~~---~g~~ 113 (322)
T 2fp8_A 41 RVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY----YHLSVVGSE---GGHA 113 (322)
T ss_dssp EEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT----TEEEEECTT---CEEC
T ss_pred eEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC----CCEEEEeCC---CCEE
Confidence 4678898887776543110 00112333444 7899988432 347889987 5544
Q ss_pred eecCCCCc-c--cccceEEEec-CCcEEEEc
Q 009420 139 KEIDGLGA-R--RWYATDHILP-DGRIIIIG 165 (535)
Q Consensus 139 ~~~~~m~~-~--R~y~s~~~L~-dG~vyvvG 165 (535)
+.+..... . ..-...++-+ +|+||+.-
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d 144 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTD 144 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEE
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEEC
Confidence 44332111 0 1112355556 78888863
No 191
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=88.27 E-value=14 Score=34.98 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=54.1
Q ss_pred cEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCccc-ccceEEEecCCc-EEEEcCccCCeeEEE-eCCCCCCee-ee
Q 009420 111 VLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARR-WYATDHILPDGR-IIIIGGRRQFNYEFY-PKNGAPNVY-SL 186 (535)
Q Consensus 111 ~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R-~y~s~~~L~dG~-vyvvGG~~~~~~E~y-P~~~~~~w~-~~ 186 (535)
.++++++.. ..+.+||+. +.+-...-.+.... .-..++.-+||+ +|+.+.. ...+.+| ..+. +.. .+
T Consensus 2 ~~~v~~~~~---~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~-~~~v~~~d~~~~--~~~~~~ 72 (337)
T 1pby_B 2 DYILAPARP---DKLVVIDTE---KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK-SESLVKIDLVTG--ETLGRI 72 (337)
T ss_dssp EEEEEEETT---TEEEEEETT---TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT-TTEEEEEETTTC--CEEEEE
T ss_pred cEEEEcCCC---CeEEEEECC---CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC-CCeEEEEECCCC--CeEeeE
Confidence 355555542 578999987 44332211222211 123556667885 5665543 3456666 3321 211 11
Q ss_pred ccccccCCccccCCCcc-eEEEeeCCc-EEEEe-------------cCeEEEEECCCCeEEEec
Q 009420 187 PFLVQTNDPRVENNLYP-FVFLNVDGF-LFIFA-------------NNRAILFDYVNNKVVKQY 235 (535)
Q Consensus 187 ~~l~~~~~~~~~~~~yp-~~~~~~dG~-ifv~g-------------g~~~~~yDp~t~~W~~~~ 235 (535)
+..... .....| .....+||+ ||+.. ...+.+||..+.+....+
T Consensus 73 ~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 131 (337)
T 1pby_B 73 DLSTPE-----ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF 131 (337)
T ss_dssp ECCBTT-----EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE
T ss_pred EcCCcc-----cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE
Confidence 110000 000012 245567885 55542 367889999988765433
No 192
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=87.28 E-value=6.1 Score=38.95 Aligned_cols=106 Identities=10% Similarity=0.093 Sum_probs=62.8
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCce-eEEEECCCCCEEE-Cccc-cccccccceecCCCcEEEEcCCCCCCC
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAH-SVEYSVLTNEFRP-LFVQ-SNVWCSSGAVRPDGVLIQTGGFNDGEK 123 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~-~~~yDp~t~~w~~-~~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~ 123 (535)
++|++++.|+.+ | . +.+||..+++-.. +... +.....+.++-+||++++.|+.+ .
T Consensus 205 ~~g~~l~s~s~d----------~---------~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d---~ 262 (355)
T 3vu4_A 205 RKSDMVATCSQD----------G---------TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK---W 262 (355)
T ss_dssp TTSSEEEEEETT----------C---------SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT---C
T ss_pred CCCCEEEEEeCC----------C---------CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC---C
Confidence 688888877643 1 4 7899998876432 2211 33333345567899999999874 6
Q ss_pred eEEEEcCCCCCCCCceecCCCCcc-----cc--------------cceEEEecCCcEEEEcCccCCeeEEE
Q 009420 124 KIRSFVPCNDESCDWKEIDGLGAR-----RW--------------YATDHILPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 124 ~v~~ydp~~~~~~~W~~~~~m~~~-----R~--------------y~s~~~L~dG~vyvvGG~~~~~~E~y 175 (535)
.+++||......+++..+..+-.+ .| ...++.-+||+.+++|..++ .++.|
T Consensus 263 ~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg-~~~~~ 332 (355)
T 3vu4_A 263 TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTR-MIETF 332 (355)
T ss_dssp EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTT-EEEEE
T ss_pred EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCC-eEEEE
Confidence 789999762213344443321111 11 12345666888888887654 44544
No 193
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=87.14 E-value=24 Score=37.13 Aligned_cols=82 Identities=11% Similarity=0.021 Sum_probs=44.2
Q ss_pred ceEEEEecCCCCCeeeecCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCC
Q 009420 294 TCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTI 373 (535)
Q Consensus 294 s~e~~d~~~~~~~W~~~~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~ 373 (535)
.+.++|+.. .+++...-..... .....-|||+.++.+... + ..++.+||.++. +.+.+... .
T Consensus 176 ~i~~~d~~~--g~~~~l~~~~~~~-~~~~~SpDG~~l~~~~~~-~----------~~~i~~~d~~~~---~~~~~~~~-~ 237 (582)
T 3o4h_A 176 SLFTSNLSS--GGLRVFDSGEGSF-SSASISPGMKVTAGLETA-R----------EARLVTVDPRDG---SVEDLELP-S 237 (582)
T ss_dssp EEEEEETTT--CCCEEECCSSCEE-EEEEECTTSCEEEEEECS-S----------CEEEEEECTTTC---CEEECCCS-C
T ss_pred EEEEEcCCC--CCceEeecCCCcc-ccceECCCCCEEEEccCC-C----------eeEEEEEcCCCC---cEEEccCC-C
Confidence 355666553 4444331111112 334567999988743322 1 136789999887 66633221 1
Q ss_pred Cccccccee--------ecCCCcEEEecCC
Q 009420 374 PRMYHSTAV--------LLRDGRVLVGGSN 395 (535)
Q Consensus 374 ~R~yhs~a~--------LlpDG~V~v~GG~ 395 (535)
... . ... ..|||++++.+..
T Consensus 238 ~~~-~-~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 238 KDF-S-SYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp SHH-H-HHCCSEEEEEEECTTSCEEEEEEE
T ss_pred cCh-h-hhhhccccceeEcCCCcEEEEEEc
Confidence 111 1 123 6799999888864
No 194
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=87.14 E-value=21 Score=33.99 Aligned_cols=139 Identities=12% Similarity=0.080 Sum_probs=75.0
Q ss_pred eeEEEECCCCCEEECcccc----ccccccceecCCCcEEEE----cCCC----------CCCCeEEEEcCCCCCCCCcee
Q 009420 79 HSVEYSVLTNEFRPLFVQS----NVWCSSGAVRPDGVLIQT----GGFN----------DGEKKIRSFVPCNDESCDWKE 140 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~----~~~c~~~~~l~dG~l~v~----GG~~----------~g~~~v~~ydp~~~~~~~W~~ 140 (535)
.+.+||+. ++.+.+.... .......++.+||+||++ |-.. .+...+.+||+. +.+++.
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~---~g~~~~ 183 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD---GSPLQR 183 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS---SCCCEE
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC---CCcEEE
Confidence 46788886 7776654211 112334556789999996 4321 113568999997 677765
Q ss_pred cCCCCcccccceEEEecCCc-EEEEcCcc----CCeeEEE-eCCCCCCeeeeccccccCCccccCCCcce-EEEeeCCcE
Q 009420 141 IDGLGARRWYATDHILPDGR-IIIIGGRR----QFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPF-VFLNVDGFL 213 (535)
Q Consensus 141 ~~~m~~~R~y~s~~~L~dG~-vyvvGG~~----~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~-~~~~~dG~i 213 (535)
+..+. .-.+.+.-+||+ +|+..... ...+..| ...+ .......+... ...+|. ..+-++|+|
T Consensus 184 ~~~~~---~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~--~l~~~~~~~~~------~~~~pdgi~~d~~G~l 252 (305)
T 3dr2_A 184 MADLD---HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG--ALHDRRHFASV------PDGLPDGFCVDRGGWL 252 (305)
T ss_dssp EEEES---SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT--EEEEEEEEECC------SSSCCCSEEECTTSCE
T ss_pred EecCC---CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC--CccCCeEEEEC------CCCCCCeEEECCCCCE
Confidence 54221 123456667887 66654321 1344555 3221 11100000000 011222 455679999
Q ss_pred EEEecCeEEEEECCCCeEE
Q 009420 214 FIFANNRAILFDYVNNKVV 232 (535)
Q Consensus 214 fv~gg~~~~~yDp~t~~W~ 232 (535)
|+..+..+.+||+......
T Consensus 253 wv~~~~gv~~~~~~g~~~~ 271 (305)
T 3dr2_A 253 WSSSGTGVCVFDSDGQLLG 271 (305)
T ss_dssp EECCSSEEEEECTTSCEEE
T ss_pred EEecCCcEEEECCCCCEEE
Confidence 9887777899999765543
No 195
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=87.09 E-value=20 Score=33.59 Aligned_cols=87 Identities=11% Similarity=0.140 Sum_probs=45.3
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCC-cccccceEEEec
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLG-ARRWYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~-~~R~y~s~~~L~ 157 (535)
.+.+||.++++-......+...+. ....++++++.|+.. ..+..++.. .... .+..+. ............
T Consensus 90 ~v~iw~~~~~~~~~~~~~h~~~~~--~~~~~~~~l~s~~~~---~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~ 160 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTSHSARVG--SLSWNSYILSSGSRS---GHIHHHDVR---VAEH-HVATLSGHSQEVCGLRWAP 160 (318)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEE--EEEEETTEEEEEETT---SEEEEEETT---SSSC-EEEEEECCSSCEEEEEECT
T ss_pred cEEEeecCCceeEEEecCccceEE--EeecCCCEEEEEecC---CceEeeecC---CCce-eEEEEcCccCceEEEEEcC
Confidence 577899888765433222222222 233467888888763 345556554 2221 111111 112223444556
Q ss_pred CCcEEEEcCccCCeeEEE
Q 009420 158 DGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 158 dG~vyvvGG~~~~~~E~y 175 (535)
+|+.++.|+.++ .+.+|
T Consensus 161 ~~~~l~s~~~d~-~i~iw 177 (318)
T 4ggc_A 161 DGRHLASGGNDN-LVNVW 177 (318)
T ss_dssp TSSEEEEEETTS-CEEEE
T ss_pred CCCEEEEEecCc-ceeEE
Confidence 788888887764 45566
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=86.98 E-value=21 Score=33.86 Aligned_cols=75 Identities=17% Similarity=0.188 Sum_probs=47.2
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCC----CcccccceEE
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGL----GARRWYATDH 154 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m----~~~R~y~s~~ 154 (535)
.+..||+.+++.+...... ...+.+..+||++++... ..+.+||+. +.+++.+... +..| -...+
T Consensus 36 ~i~~~d~~~~~~~~~~~~~--~~~~i~~~~dG~l~v~~~-----~~l~~~d~~---~g~~~~~~~~~~~~~~~~-~~di~ 104 (297)
T 3g4e_A 36 KVCRWDSFTKQVQRVTMDA--PVSSVALRQSGGYVATIG-----TKFCALNWK---EQSAVVLATVDNDKKNNR-FNDGK 104 (297)
T ss_dssp EEEEEETTTCCEEEEECSS--CEEEEEEBTTSSEEEEET-----TEEEEEETT---TTEEEEEEECCTTCSSEE-EEEEE
T ss_pred EEEEEECCCCcEEEEeCCC--ceEEEEECCCCCEEEEEC-----CeEEEEECC---CCcEEEEEecCCCCCCCC-CCCEE
Confidence 4789999998775543222 222345567999777642 468899998 7777655432 1222 22455
Q ss_pred EecCCcEEEE
Q 009420 155 ILPDGRIIII 164 (535)
Q Consensus 155 ~L~dG~vyvv 164 (535)
.-+||++|+.
T Consensus 105 ~d~dG~l~~~ 114 (297)
T 3g4e_A 105 VDPAGRYFAG 114 (297)
T ss_dssp ECTTSCEEEE
T ss_pred ECCCCCEEEe
Confidence 6678998884
No 197
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=85.54 E-value=15 Score=36.44 Aligned_cols=171 Identities=15% Similarity=0.140 Sum_probs=84.7
Q ss_pred CCcceEEEee--CCcEEEEe--cCeEEEEECCCCeEEEecCCCCC----CCCCCCCCCCceEeecccccCCCCCCcEEEE
Q 009420 200 NLYPFVFLNV--DGFLFIFA--NNRAILFDYVNNKVVKQYPAIPG----GDPRSYPSSGSAVLLPLKNLLAPSVAAEVLV 271 (535)
Q Consensus 200 ~~yp~~~~~~--dG~ifv~g--g~~~~~yDp~t~~W~~~~p~~p~----~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv 271 (535)
++||-...-- +|++|+.. +..+..||+..+.-+. + .+|. +.....+ +|..+ +.-. -+++|++
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~-~-~~~~~s~~g~~~~~~-sGl~~-~~~D------~~grL~v 81 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFN-V-VIDGASSNGDGEQQM-SGLSL-LTHD------NSKRLFA 81 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEE-E-CCTTTCCSSCCSEEE-EEEEE-SSSS------SCCEEEE
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEE-E-ecCCccccCCCccee-eEEEE-eccC------CCCcEEE
Confidence 4566554442 46666554 3567889998765442 3 3343 1111111 12111 1001 1589999
Q ss_pred EcCCCCCcccccccccccccCCceEEEEec---CCCCCeeee-c-CCC---------CceeceeEEccCCeEEEEcCCCC
Q 009420 272 CGGAPKGAYEQAEKGVFVAALNTCARIKIT---DPTPTWVLE-T-MPQ---------PRVMGDMTLLPNGNVLLINGAGK 337 (535)
Q Consensus 272 ~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~---~~~~~W~~~-~-m~~---------~R~~~~~v~lpdG~I~vvGG~~~ 337 (535)
+--.. .++... ..-....+.+.+||+. +....|... + ... ....-++++=++|.+||++-...
T Consensus 82 v~~~~-~af~~~--g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~ 158 (334)
T 2p9w_A 82 VMKNA-KSFNFA--DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM 158 (334)
T ss_dssp EEEET-TTTCTT--SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS
T ss_pred EEccc-cccccc--ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC
Confidence 72110 011000 0000124567899987 444567654 2 111 12344667788999999864321
Q ss_pred CCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCC
Q 009420 338 GTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSN 395 (535)
Q Consensus 338 g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~ 395 (535)
..+..+||....-..|-.-.+-...|....-.+..|||+.|++-..
T Consensus 159 ------------~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 159 ------------PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp ------------CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred ------------CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 1467888876522235433322333433334456789976666544
No 198
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=85.44 E-value=33 Score=34.59 Aligned_cols=139 Identities=11% Similarity=0.109 Sum_probs=74.5
Q ss_pred eeEEEECC--CCCEEEC-cc-ccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCcee--cCCCCcc-cccc
Q 009420 79 HSVEYSVL--TNEFRPL-FV-QSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKE--IDGLGAR-RWYA 151 (535)
Q Consensus 79 ~~~~yDp~--t~~w~~~-~~-~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~--~~~m~~~-R~y~ 151 (535)
.+.+||.. +++.... .. .....+.+.++.+||+.+++|+.. ..+..||.. ..+... ...+... ..-.
T Consensus 126 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~---g~v~~~~~~---~~~~~~~~~~~~~~h~~~v~ 199 (450)
T 2vdu_B 126 SLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF---GDVYSIDIN---SIPEEKFTQEPILGHVSMLT 199 (450)
T ss_dssp EEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---SCCCSSCCCCCSEECSSCEE
T ss_pred eEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC---CcEEEEecC---CcccccccceeeecccCceE
Confidence 47899987 5543332 11 122333345567899999998763 467888865 332221 1122211 1223
Q ss_pred eEEEecC---CcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcce-EEEeeCCcEEEEecC--eEEEE
Q 009420 152 TDHILPD---GRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPF-VFLNVDGFLFIFANN--RAILF 224 (535)
Q Consensus 152 s~~~L~d---G~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~-~~~~~dG~ifv~gg~--~~~~y 224 (535)
+++.-+| ++.++.|+.++ .+.+| .... ... ..++... ..... +... +|++++.|+. .+.+|
T Consensus 200 ~~~~sp~~~~~~~l~s~~~d~-~i~vwd~~~~--~~~-~~~~~~h-------~~~v~~~~~s-d~~~l~s~~~d~~v~vw 267 (450)
T 2vdu_B 200 DVHLIKDSDGHQFIITSDRDE-HIKISHYPQC--FIV-DKWLFGH-------KHFVSSICCG-KDYLLLSAGGDDKIFAW 267 (450)
T ss_dssp EEEEEECTTSCEEEEEEETTS-CEEEEEESCT--TCE-EEECCCC-------SSCEEEEEEC-STTEEEEEESSSEEEEE
T ss_pred EEEEcCCCCCCcEEEEEcCCC-cEEEEECCCC--cee-eeeecCC-------CCceEEEEEC-CCCEEEEEeCCCeEEEE
Confidence 4556668 88888888764 46666 3321 111 0111111 00111 2223 8888888763 57899
Q ss_pred ECCCCeEEEec
Q 009420 225 DYVNNKVVKQY 235 (535)
Q Consensus 225 Dp~t~~W~~~~ 235 (535)
|..+.+....+
T Consensus 268 d~~~~~~~~~~ 278 (450)
T 2vdu_B 268 DWKTGKNLSTF 278 (450)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCcEeeee
Confidence 99887755433
No 199
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=85.24 E-value=29 Score=33.76 Aligned_cols=97 Identities=11% Similarity=-0.011 Sum_probs=55.3
Q ss_pred EeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCe
Q 009420 45 LLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKK 124 (535)
Q Consensus 45 ~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~ 124 (535)
.-+||+-+++..... | ...+.++|+.+++.+++.........+...-+||+.+++.... ..
T Consensus 43 ~SpDg~~l~~~~~~~---------g-------~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---~~ 103 (388)
T 3pe7_A 43 FTRDGSKLLFGGAFD---------G-------PWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---RN 103 (388)
T ss_dssp BCTTSCEEEEEECTT---------S-------SCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT---TE
T ss_pred CCCCCCEEEEEEcCC---------C-------CceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC---Ce
Confidence 347888777765321 1 1357889999999888864433222234567899877776542 57
Q ss_pred EEEEcCCCCCCCCceecCCCCcccc-cceEEEecCCcEEE
Q 009420 125 IRSFVPCNDESCDWKEIDGLGARRW-YATDHILPDGRIII 163 (535)
Q Consensus 125 v~~ydp~~~~~~~W~~~~~m~~~R~-y~s~~~L~dG~vyv 163 (535)
+.++|.. +.+-..+...+...- +.....-+||+.++
T Consensus 104 l~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~ 140 (388)
T 3pe7_A 104 LMRVDLA---TLEENVVYQVPAEWVGYGTWVANSDCTKLV 140 (388)
T ss_dssp EEEEETT---TCCEEEEEECCTTEEEEEEEEECTTSSEEE
T ss_pred EEEEECC---CCcceeeeechhhcccccceeECCCCCeec
Confidence 8888987 554333322222111 11112245777665
No 200
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=84.62 E-value=8.1 Score=37.29 Aligned_cols=82 Identities=15% Similarity=0.140 Sum_probs=48.4
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPD 158 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~d 158 (535)
.+.+||..+.+-...-..+.....+.++.+||++++.||.+ ..+++||.. +.+ .+..+.....-.+++.-+|
T Consensus 177 ~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~d---g~i~iwd~~---~~~--~~~~~~~~~~v~~~~~sp~ 248 (319)
T 3frx_A 177 MVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKD---GEIMLWNLA---AKK--AMYTLSAQDEVFSLAFSPN 248 (319)
T ss_dssp CEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETT---CEEEEEETT---TTE--EEEEEECCSCEEEEEECSS
T ss_pred EEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC---CCc--EEEEecCCCcEEEEEEcCC
Confidence 46788887765433222233333344566899999999874 579999987 332 1111111122335666778
Q ss_pred CcEEEEcCcc
Q 009420 159 GRIIIIGGRR 168 (535)
Q Consensus 159 G~vyvvGG~~ 168 (535)
|+.++.+..+
T Consensus 249 ~~~la~~~~~ 258 (319)
T 3frx_A 249 RYWLAAATAT 258 (319)
T ss_dssp SSEEEEEETT
T ss_pred CCEEEEEcCC
Confidence 8888876543
No 201
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.76 E-value=5.9 Score=37.29 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=63.1
Q ss_pred cceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcc---cccceEEEecCCcEEEEcCccCCeeEEE-eCC
Q 009420 103 SGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGAR---RWYATDHILPDGRIIIIGGRRQFNYEFY-PKN 178 (535)
Q Consensus 103 ~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~---R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~ 178 (535)
+..+-+||.||++ . + -.+.+.+|-+++.+.|...+..--. +-++....-++|.||++. ++.-+... |..
T Consensus 92 a~~fD~~G~LYav--~-d--G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~ 164 (236)
T 1tl2_A 92 FLFFDPNGYLYAV--S-K--DKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVS 164 (236)
T ss_dssp EEEECTTSCEEEE--E-T--TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSS
T ss_pred EEEECCCCCEEEe--C-C--CEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCC
Confidence 3445689999999 2 3 3677778754446789655432111 234677788899999998 33333334 554
Q ss_pred CCCCeeee-ccccccCCccccCCCcceEEEeeCCcEEEEe
Q 009420 179 GAPNVYSL-PFLVQTNDPRVENNLYPFVFLNVDGFLFIFA 217 (535)
Q Consensus 179 ~~~~w~~~-~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~g 217 (535)
....|... ..+-. ..++.|++.+..++|.||.+-
T Consensus 165 ~~~~wl~~~~~~g~-----~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 165 NQDNWLARATKIGQ-----GGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp TTCCHHHHCEEEES-----SSGGGEEEEEECTTSCEEEEE
T ss_pred CCcccccccceecc-----CCcceEEEEEECCCCcEEEEe
Confidence 44456321 11111 235678888888899998766
No 202
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=81.47 E-value=75 Score=35.77 Aligned_cols=62 Identities=6% Similarity=-0.023 Sum_probs=37.3
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeE
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKI 125 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v 125 (535)
-+++++++.|+.+ | .+.+||..+.+-.... .+.......++.+ |++++.|+.+ ..+
T Consensus 26 spdg~~lAsgs~D----------g---------~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D---~~v 81 (902)
T 2oaj_A 26 DFTQNLLAIATVT----------G---------EVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAK---DTV 81 (902)
T ss_dssp ETTTTEEEEEETT----------S---------EEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETT---CEE
T ss_pred CCCCCEEEEEeCC----------C---------EEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECc---CeE
Confidence 3689999888754 2 4778887765432211 1111112233445 7777777653 689
Q ss_pred EEEcCC
Q 009420 126 RSFVPC 131 (535)
Q Consensus 126 ~~ydp~ 131 (535)
++||..
T Consensus 82 ~lWd~~ 87 (902)
T 2oaj_A 82 YVLSLY 87 (902)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999987
No 203
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=79.92 E-value=41 Score=31.73 Aligned_cols=122 Identities=11% Similarity=0.103 Sum_probs=58.3
Q ss_pred eEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCC
Q 009420 80 SVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDG 159 (535)
Q Consensus 80 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG 159 (535)
+.+|| .+++...............+...+|+|++. .. . +..||+.. ...|..... ... ..+.+.. +|
T Consensus 42 l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~-t~----~-l~~~d~~g--~~~~~~~~~--~~~-~~~~~~~-~~ 108 (330)
T 3hxj_A 42 LYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFG-SD----K-VYAINPDG--TEKWRFDTK--KAI-VSDFTIF-ED 108 (330)
T ss_dssp TEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCS-SC----E-EEEECCCG--GGGGGSCC--------CCEEEE-TT
T ss_pred EEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEe-cC----c-EEEECCCC--cEEEEEECC--CCc-ccCceEE-CC
Confidence 46788 666643322222222233344458887763 21 2 88999751 335653221 111 1222333 78
Q ss_pred cEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec-CeEEEEECC
Q 009420 160 RIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN-NRAILFDYV 227 (535)
Q Consensus 160 ~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-~~~~~yDp~ 227 (535)
.||+.. .+ ..+-.| +. ....|..... . ..........+|+||+... ....+||++
T Consensus 109 ~l~v~t-~~-~~l~~~d~~-g~~~~~~~~~--~--------~~~~~~~~~~~g~l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 109 ILYVTS-MD-GHLYAINTD-GTEKWRFKTK--K--------AIYATPIVSEDGTIYVGSNDNYLYAINPD 165 (330)
T ss_dssp EEEEEC-TT-SEEEEECTT-SCEEEEEECS--S--------CCCSCCEECTTSCEEEECTTSEEEEECTT
T ss_pred EEEEEe-cC-CEEEEEcCC-CCEEEEEcCC--C--------ceeeeeEEcCCCEEEEEcCCCEEEEECCC
Confidence 888743 22 233444 33 2123332110 0 0011223445888888664 568899998
No 204
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=79.46 E-value=37 Score=30.90 Aligned_cols=106 Identities=12% Similarity=0.117 Sum_probs=63.2
Q ss_pred EEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCC-CCEEECcccc-ccccccceecCCCcEEEEcCCC-C
Q 009420 44 QLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLT-NEFRPLFVQS-NVWCSSGAVRPDGVLIQTGGFN-D 120 (535)
Q Consensus 44 ~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t-~~w~~~~~~~-~~~c~~~~~l~dG~l~v~GG~~-~ 120 (535)
..-++|+.+++++ + ..+.+||..+ ++...+.... ..........+||+.+++++.. +
T Consensus 48 ~~spdg~~l~~~~-~-------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 107 (297)
T 2ojh_A 48 NWSPDGKYLLLNS-E-------------------GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF 107 (297)
T ss_dssp EECTTSSEEEEEE-T-------------------TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT
T ss_pred EECCCCCEEEEEc-C-------------------CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC
Confidence 3346888887764 2 1478999999 8877765333 2223345567899988887743 2
Q ss_pred CCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEE
Q 009420 121 GEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 121 g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y 175 (535)
+...+..+|.. +.+...+..... ....+.-+||+.+++.+.......+|
T Consensus 108 ~~~~l~~~~~~---~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~~~l~ 156 (297)
T 2ojh_A 108 GKSAIYLLPST---GGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQVFDIY 156 (297)
T ss_dssp SSCEEEEEETT---CCCCEECCSSSS---EEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred CcceEEEEECC---CCceEEeecCCC---ccceEECCCCCEEEEEECCCCceEEE
Confidence 35678888876 455444432221 22345556888666433333345565
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=76.05 E-value=69 Score=32.22 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=23.3
Q ss_pred cceEE-EeeCCcEEEEec--CeEEEEECCCCeEEE
Q 009420 202 YPFVF-LNVDGFLFIFAN--NRAILFDYVNNKVVK 233 (535)
Q Consensus 202 yp~~~-~~~dG~ifv~gg--~~~~~yDp~t~~W~~ 233 (535)
.|+.. +-++|+||+... +.+.+||+++++...
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~ 166 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT 166 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE
Confidence 35443 347999999864 678899999887653
No 206
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=75.35 E-value=25 Score=35.62 Aligned_cols=18 Identities=22% Similarity=0.333 Sum_probs=15.3
Q ss_pred ccceEEEecCCcEEEEcC
Q 009420 149 WYATDHILPDGRIIIIGG 166 (535)
Q Consensus 149 ~y~s~~~L~dG~vyvvGG 166 (535)
++|+++...||+||..|-
T Consensus 234 ~~ht~~l~~~G~v~~wG~ 251 (406)
T 4d9s_A 234 WRHTISVSYSGALYTYGW 251 (406)
T ss_dssp SSEEEEEETTCCEEEEEC
T ss_pred CCcEEEEcCCCCEEEeeC
Confidence 478888888999999994
No 207
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=74.87 E-value=1e+02 Score=33.74 Aligned_cols=133 Identities=12% Similarity=0.064 Sum_probs=71.9
Q ss_pred eEEEECCCCCEEECccc------cccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecC------CCCcc
Q 009420 80 SVEYSVLTNEFRPLFVQ------SNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEID------GLGAR 147 (535)
Q Consensus 80 ~~~yDp~t~~w~~~~~~------~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~------~m~~~ 147 (535)
..+||+++++|+..... ......+.....+|+|++... ..+.+||+. +.++ ... .++..
T Consensus 473 l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-----~Gl~~~~~~---~~~~-~~~~~~~~~~l~~~ 543 (795)
T 4a2l_A 473 LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-----EGLSVFKQE---GLDI-QKASILPVSNVTKL 543 (795)
T ss_dssp EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-----SCEEEEEEE---TTEE-EECCCSCSCGGGGS
T ss_pred eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-----CceEEEeCC---CCeE-EEecCCCCCCCCCC
Confidence 57899999999887532 111222233446888888643 237788887 6666 322 12211
Q ss_pred cccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecCeEEEEEC
Q 009420 148 RWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDY 226 (535)
Q Consensus 148 R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~~~~yDp 226 (535)
.-.+.+.-.+|+|++... . ..-.| |.+. ......... . .+.+..-....-.+|+|++..++...+|||
T Consensus 544 -~i~~i~~d~~g~lWigT~-~--Gl~~~d~~~~--~~~~~~~~~---g--l~~~~i~~i~~d~~g~lWi~t~~Gl~~~~~ 612 (795)
T 4a2l_A 544 -FTNCIYEASNGIIWVGTR-E--GFYCFNEKDK--QIKRYNTTN---G--LPNNVVYGILEDSFGRLWLSTNRGISCFNP 612 (795)
T ss_dssp -CEEEEEECTTSCEEEEES-S--CEEEEETTTT--EEEEECGGG---T--CSCSCEEEEEECTTSCEEEEETTEEEEEET
T ss_pred -eeEEEEECCCCCEEEEeC-C--CceeECCCCC--cEEEeCCCC---C--CchhheEEEEECCCCCEEEEcCCceEEEcC
Confidence 222344445789887532 1 34445 4432 222211000 0 111111112233478999988888889999
Q ss_pred CCCeEE
Q 009420 227 VNNKVV 232 (535)
Q Consensus 227 ~t~~W~ 232 (535)
+++++.
T Consensus 613 ~~~~~~ 618 (795)
T 4a2l_A 613 ETEKFR 618 (795)
T ss_dssp TTTEEE
T ss_pred CCCcEE
Confidence 988765
No 208
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=73.36 E-value=1e+02 Score=32.91 Aligned_cols=88 Identities=6% Similarity=-0.026 Sum_probs=50.5
Q ss_pred ceeEEEECCC-----CCEEECcccccc-c-------------cccceecCCCcEEEEcCCC-------------------
Q 009420 78 AHSVEYSVLT-----NEFRPLFVQSNV-W-------------CSSGAVRPDGVLIQTGGFN------------------- 119 (535)
Q Consensus 78 ~~~~~yDp~t-----~~w~~~~~~~~~-~-------------c~~~~~l~dG~l~v~GG~~------------------- 119 (535)
..+.+||..+ ++...+...... . ..+...-+||+.++++..+
T Consensus 141 ~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~ 220 (706)
T 2z3z_A 141 HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAES 220 (706)
T ss_dssp TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCce
Confidence 3577899988 877776532221 1 2344567899988887521
Q ss_pred -----------CCCCeEEEEcCCCCCCCCceecCCC-CcccccceEEEecCCcEEEEcCcc
Q 009420 120 -----------DGEKKIRSFVPCNDESCDWKEIDGL-GARRWYATDHILPDGRIIIIGGRR 168 (535)
Q Consensus 120 -----------~g~~~v~~ydp~~~~~~~W~~~~~m-~~~R~y~s~~~L~dG~vyvvGG~~ 168 (535)
.....+.+||.. +.+-..+... .........+.-+||+.++++..+
T Consensus 221 ~~~~y~~~g~~~~~~~l~~~d~~---~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 278 (706)
T 2z3z_A 221 KPLYYPMAGTPSHHVTVGIYHLA---TGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN 278 (706)
T ss_dssp EEECCCBTTSCCCEEEEEEEETT---TTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC
T ss_pred EEeeCCCCCCCCCeeEEEEEECC---CCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC
Confidence 122568889987 5544333321 122222345566799866665543
No 209
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=73.22 E-value=37 Score=36.43 Aligned_cols=145 Identities=9% Similarity=-0.024 Sum_probs=80.5
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcccccc-----ccccceecCCCcEEEEcCCCCC
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNV-----WCSSGAVRPDGVLIQTGGFNDG 121 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~-----~c~~~~~l~dG~l~v~GG~~~g 121 (535)
|+|+.++.++.+ | .+.+||-++ .+..+. +.. -..+.++-+||+++++||.+
T Consensus 95 PdG~~LAs~s~d----------g---------~V~iwd~~~-~l~~l~--~~~~~~~~sv~svafSPDG~~LAsgs~D-- 150 (588)
T 2j04_A 95 PIDDWMAVLSNN----------G---------NVSVFKDNK-MLTNLD--SKGNLSSRTYHCFEWNPIESSIVVGNED-- 150 (588)
T ss_dssp SSSSCEEEEETT----------S---------CEEEEETTE-EEEECC--CSSCSTTTCEEEEEECSSSSCEEEEETT--
T ss_pred CCCCEEEEEeCC----------C---------cEEEEeCCc-eeeecc--CCCccccccEEEEEEcCCCCEEEEEcCC--
Confidence 688888777643 2 367888544 444443 222 24455667899999999974
Q ss_pred CCeEEEEcCCCCCCCCc-----eecCCCC-----cccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCC--Ceeeecc
Q 009420 122 EKKIRSFVPCNDESCDW-----KEIDGLG-----ARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAP--NVYSLPF 188 (535)
Q Consensus 122 ~~~v~~ydp~~~~~~~W-----~~~~~m~-----~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~--~w~~~~~ 188 (535)
..+++||.. ++.- ..+..+. ...|-.+.+..+|| ++.++.+ .++.+| ...+.. .+..+..
T Consensus 151 -GtVkIWd~~---~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D-~tVrlWd~~~~~~~~~~~tL~~ 223 (588)
T 2j04_A 151 -GELQFFSIR---KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN-NSVFSMTVSASSHQPVSRMIQN 223 (588)
T ss_dssp -SEEEEEECC---CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT-CCEEEECCCSSSSCCCEEEEEC
T ss_pred -CEEEEEECC---CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC-CeEEEEECCCCccccceeeecc
Confidence 679999987 4421 1111111 12366677778888 5666654 456666 332210 1112210
Q ss_pred ccccCCccccCCCcceEEEeeCCcEEEEecCeEEEEECCCCeE
Q 009420 189 LVQTNDPRVENNLYPFVFLNVDGFLFIFANNRAILFDYVNNKV 231 (535)
Q Consensus 189 l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~~~~yDp~t~~W 231 (535)
..++ .-...++. +..|...+++.+.+||..+++-
T Consensus 224 --~h~~-----~V~svaFs--g~~LASa~~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 224 --ASRR-----KITDLKIV--DYKVVLTCPGYVHKIDLKNYSI 257 (588)
T ss_dssp --CCSS-----CCCCEEEE--TTEEEEECSSEEEEEETTTTEE
T ss_pred --cccC-----cEEEEEEE--CCEEEEEeCCeEEEEECCCCeE
Confidence 1111 01112333 4445445556789999998875
No 210
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=72.02 E-value=9.9 Score=35.86 Aligned_cols=102 Identities=11% Similarity=0.122 Sum_probs=54.7
Q ss_pred CcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCC--CCceeceeEEcc--CCeEEEEcCCCCCCC
Q 009420 266 AAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMP--QPRVMGDMTLLP--NGNVLLINGAGKGTA 340 (535)
Q Consensus 266 ~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~--~~R~~~~~v~lp--dG~I~vvGG~~~g~~ 340 (535)
+++++++|+.+ ..+..+|+......++.. .+. ..... +....+ |++++++|+.+ +
T Consensus 22 ~~~~l~~~~~d----------------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~d~~~l~s~~~d-g-- 81 (351)
T 3f3f_A 22 YGRHVATCSSD----------------QHIKVFKLDKDTSNWELSDSWRAHDSSIV-AIDWASPEYGRIIASASYD-K-- 81 (351)
T ss_dssp SSSEEEEEETT----------------SEEEEEEECSSSCCEEEEEEEECCSSCEE-EEEECCGGGCSEEEEEETT-S--
T ss_pred CCCEEEEeeCC----------------CeEEEEECCCCCCcceecceeccCCCcEE-EEEEcCCCCCCEEEEEcCC-C--
Confidence 67778887754 134456665433445543 222 22222 223345 58999998865 2
Q ss_pred CcccCCCCccccEEEeCCCCC----CCceeecCCCCCCcccccceeecCC--CcEEEecCCCC
Q 009420 341 GWELGRDPVLAPVVYRPDNIP----GSRFDLQNPSTIPRMYHSTAVLLRD--GRVLVGGSNPH 397 (535)
Q Consensus 341 g~~~~~~~~~~~e~YDP~t~~----g~~Wt~~~~~~~~R~yhs~a~LlpD--G~V~v~GG~~~ 397 (535)
.+.+||..+.. +..|..+.........-......|+ ++.+++|+...
T Consensus 82 ----------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 134 (351)
T 3f3f_A 82 ----------TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG 134 (351)
T ss_dssp ----------CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC
T ss_pred ----------eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC
Confidence 46889887752 1234433222211111223445688 89888887643
No 211
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=71.86 E-value=1.2e+02 Score=33.05 Aligned_cols=132 Identities=15% Similarity=0.114 Sum_probs=64.7
Q ss_pred eCCcEEEEec--CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccc
Q 009420 209 VDGFLFIFAN--NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKG 286 (535)
Q Consensus 209 ~dG~ifv~gg--~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~ 286 (535)
.+|+|++.++ ....+||++++++.. ... ... .... ....++- ..+|.|++... . +
T Consensus 481 ~~g~lWi~~~t~~Gl~~~d~~~~~~~~-~~~-~~~-~~~~---~~~~i~~-------d~~g~lWigt~-~-G-------- 537 (758)
T 3ott_A 481 NEGNVWVLLYNNKGIDKINPRTREVTK-LFA-DEL-TGEK---SPNYLLC-------DEDGLLWVGFH-G-G-------- 537 (758)
T ss_dssp TTSCEEEEETTCSSEEEEETTTTEEEE-ECT-TTS-CGGG---CEEEEEE-------CTTSCEEEEET-T-E--------
T ss_pred CCCCEEEEccCCCCcEEEeCCCCceEE-ecC-CCc-CCCc---ccceEEE-------CCCCCEEEEec-C-c--------
Confidence 4788998433 457899999998874 421 110 0000 0111211 13678886432 1 1
Q ss_pred cccccCCceEEEEecCCCCCeeee---cCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCC
Q 009420 287 VFVAALNTCARIKITDPTPTWVLE---TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGS 363 (535)
Q Consensus 287 ~~~pa~~s~e~~d~~~~~~~W~~~---~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~ 363 (535)
..+||+.. .+++.. .++..... +++-.+|+|++... .| ..+|||++.
T Consensus 538 --------l~~~~~~~--~~~~~~~~~gl~~~~i~--~i~~~~g~lWi~t~--~G-------------l~~~~~~~~--- 587 (758)
T 3ott_A 538 --------VMRINPKD--ESQQSISFGSFSNNEIL--SMTCVKNSIWVSTT--NG-------------LWIIDRKTM--- 587 (758)
T ss_dssp --------EEEECC----CCCCBCCCCC---CCEE--EEEEETTEEEEEES--SC-------------EEEEETTTC---
T ss_pred --------eEEEecCC--CceEEecccCCCccceE--EEEECCCCEEEECC--CC-------------eEEEcCCCc---
Confidence 23444432 222221 33332222 23335788887542 22 479999998
Q ss_pred ceeecCCCCCCcccccceeecCCCcEEEecCC
Q 009420 364 RFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSN 395 (535)
Q Consensus 364 ~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~ 395 (535)
+++... ++.... .+.+....||++|++|-+
T Consensus 588 ~~~~~~-~~~~~~-~~~~~~~~~G~l~fG~~~ 617 (758)
T 3ott_A 588 DARQQN-MTNKRF-TSLLFDPKEDCVYLGGAD 617 (758)
T ss_dssp CEEEC---CCCCC-SEEEEETTTTEEEEECBS
T ss_pred eeEEec-CCCCce-eeeEEECCCCcEEEecCC
Confidence 776542 111111 223334469999998764
No 212
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=71.42 E-value=21 Score=35.70 Aligned_cols=171 Identities=13% Similarity=0.076 Sum_probs=79.2
Q ss_pred CCCcceEEEeeCCcEEEEec--------CeEEEEEC--CCCeEEEecCCCCCCCCCCCCC--CCceEeecccccCCCCCC
Q 009420 199 NNLYPFVFLNVDGFLFIFAN--------NRAILFDY--VNNKVVKQYPAIPGGDPRSYPS--SGSAVLLPLKNLLAPSVA 266 (535)
Q Consensus 199 ~~~yp~~~~~~dG~ifv~gg--------~~~~~yDp--~t~~W~~~~p~~p~~~~R~~~~--~g~~v~lpl~~~~~~~~~ 266 (535)
...||..+.++||+|++... ....+|-. ...+|.+ +..+... ...+.. ......+|-. .....+
T Consensus 22 ~~~yp~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~DgG~TW~~-~~~v~~~-~~g~~~~~~P~l~~lp~~--v~~~~~ 97 (355)
T 3a72_A 22 RTLYPRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDHGKTWNE-ISRVHDT-VNGYGLRYQPFLYSLPER--VGSFKK 97 (355)
T ss_dssp SEEEEEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTTSCCEE-EEEECCT-TTSSCEEEEEEEEECSSC--BTTBCT
T ss_pred CCccceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCCCcCcCC-CcccCCC-cCCcccccCCcEEecCcc--cccCCC
Confidence 46689999999999998631 12334432 2457874 3222211 000000 0011112200 001126
Q ss_pred cEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-c-----CCCC-----ce-eceeEEccCCeEEEEcC
Q 009420 267 AEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-T-----MPQP-----RV-MGDMTLLPNGNVLLING 334 (535)
Q Consensus 267 gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~-----m~~~-----R~-~~~~v~lpdG~I~vvGG 334 (535)
|+|+++|-..... .....+..+--.+...+|+.. . .+.+ .. +. .+.+.+|+|++.-.
T Consensus 98 G~ll~~~~~~~~d----------~~~~~~~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~eP-~~~~~~G~l~~~~~ 166 (355)
T 3a72_A 98 GTLLLAGSSIPTD----------LSSTDIVLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWEP-FLLANKGKLICYYS 166 (355)
T ss_dssp TCEEEEEEECCTT----------CCCEEEEEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEEE-EEEEETTEEEEEEE
T ss_pred CcEEEEEeeecCC----------CCCceEEEEEECCCCccCccCccccccCccccccCCCccccc-eEEccCCeEEEEEC
Confidence 7888774211000 001123344445556789875 3 2222 12 22 45677999988753
Q ss_pred CCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCC-----CCCcccccceeecCCCcEEEe
Q 009420 335 AGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPS-----TIPRMYHSTAVLLRDGRVLVG 392 (535)
Q Consensus 335 ~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~-----~~~R~yhs~a~LlpDG~V~v~ 392 (535)
...+... ..+....--.+| |++|+..... ...|.....++-|+||+++++
T Consensus 167 ~~~~~~~-------~~~~~~~~~S~D-G~TWs~~~~~~~~~~~~~rpg~p~v~~l~dG~l~l~ 221 (355)
T 3a72_A 167 DQRDNAT-------YGQTMVHQVTND-LKNWGPVVEDVTYPTYTDRPGMPVVTKLPNGQYFYV 221 (355)
T ss_dssp ECCCTTT-------CSCEEEEEEESS-SSSCCCCEEEECCSSTTCEEEEEEEEECTTSCEEEE
T ss_pred CCCCCCC-------CCcEEEEEECCC-CCCCCCCeeccccCccCCCCCceEEEECCCCCEEEE
Confidence 2211000 011112222345 6799764322 122333335667899998776
No 213
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=70.79 E-value=37 Score=34.61 Aligned_cols=131 Identities=11% Similarity=0.040 Sum_probs=70.8
Q ss_pred CCcEEEEec-CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcE-EEEEcCCCCCccccccccc
Q 009420 210 DGFLFIFAN-NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAE-VLVCGGAPKGAYEQAEKGV 287 (535)
Q Consensus 210 dG~ifv~gg-~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gk-Iyv~GG~~~~~~~~~~~~~ 287 (535)
+|+||+.-. ..+.+||+++++.....+ .. ..| .+.+ + . .+++ ||++.-... .
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~--~~----~~P-~~ia-~-d--------~~G~~lyvad~~~~-~-------- 202 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYS--GL----SKV-RTIC-W-T--------HEADSMIITNDQNN-N-------- 202 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEEC--CC----SCE-EEEE-E-C--------TTSSEEEEEECCSC-T--------
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEec--CC----CCc-ceEE-E-e--------CCCCEEEEEeCCCC-c--------
Confidence 478888754 567889999988764332 11 112 0122 2 1 1444 898865321 1
Q ss_pred ccccCCceEEEEecCCCCCee---ee-cCCCCceeceeEEcc-CCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCC
Q 009420 288 FVAALNTCARIKITDPTPTWV---LE-TMPQPRVMGDMTLLP-NGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPG 362 (535)
Q Consensus 288 ~~pa~~s~e~~d~~~~~~~W~---~~-~m~~~R~~~~~v~lp-dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g 362 (535)
....+..++.. ..|. .. .+..+ ++.++-| +|.||+.--.. ..+..||+++.
T Consensus 203 ---~~~~v~~~~~~---g~~~~~~~l~~~~~p---~giavdp~~g~lyv~d~~~-------------~~V~~~~~~~~-- 258 (430)
T 3tc9_A 203 ---DRPNNYILTRE---SGFKVITELTKGQNC---NGAETHPINGELYFNSWNA-------------GQVFRYDFTTQ-- 258 (430)
T ss_dssp ---TSEEEEEEEGG---GTSCSEEEEEECSSC---CCEEECTTTCCEEEEETTT-------------TEEEEEETTTT--
T ss_pred ---ccceEEEEeCC---CceeeeeeeccCCCc---eEEEEeCCCCEEEEEECCC-------------CEEEEEECCCC--
Confidence 01123334433 2343 22 33333 3445667 89999974311 15789999876
Q ss_pred Cceee---cCCCCCCcccccceeecCCCc-EEEecCC
Q 009420 363 SRFDL---QNPSTIPRMYHSTAVLLRDGR-VLVGGSN 395 (535)
Q Consensus 363 ~~Wt~---~~~~~~~R~yhs~a~LlpDG~-V~v~GG~ 395 (535)
..+. +.....|+ ..++.+||+ +||+-..
T Consensus 259 -~~~~~~~~~~~~~P~----gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 259 -ETTPLFTIQDSGWEF----HIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp -EEEEEEECSSSSCCE----EEEECTTSSEEEEEETT
T ss_pred -cEEEEEEcCCCCcce----eEEEcCCCCEEEEEECC
Confidence 5422 22222333 244678998 8988543
No 214
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=69.87 E-value=1.2e+02 Score=32.51 Aligned_cols=106 Identities=14% Similarity=0.093 Sum_probs=60.9
Q ss_pred EEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCC--
Q 009420 44 QLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDG-- 121 (535)
Q Consensus 44 ~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g-- 121 (535)
..-+||+.+++.....|. ....+.++|..+++..+....... ..+.+..+||+.++++.....
T Consensus 131 ~~SPDg~~la~~~~~~G~--------------~~~~i~v~d~~tg~~~~~~~~~~~-~~~~~wspDg~~l~~~~~~~~~~ 195 (710)
T 2xdw_A 131 AFSEDGEYFAYGLSASGS--------------DWVTIKFMKVDGAKELPDVLERVK-FSCMAWTHDGKGMFYNAYPQQDG 195 (710)
T ss_dssp EECTTSSEEEEEEEETTC--------------SCEEEEEEETTTTEEEEEEEEEEC-SCCEEECTTSSEEEEEECCCCSS
T ss_pred EECCCCCEEEEEEcCCCC--------------ceEEEEEEECCCCCCCcccccCcc-cceEEEEeCCCEEEEEEECCccc
Confidence 334788888777543111 123688999999998775322211 233456789987776654322
Q ss_pred -----------CCeEEEEcCCCCCCCCce--ec-CCCCcccccceEEEecCCcEEEEcCc
Q 009420 122 -----------EKKIRSFVPCNDESCDWK--EI-DGLGARRWYATDHILPDGRIIIIGGR 167 (535)
Q Consensus 122 -----------~~~v~~ydp~~~~~~~W~--~~-~~m~~~R~y~s~~~L~dG~vyvvGG~ 167 (535)
...+.+++.. +.+.. .+ ..-..+.+..+...-+||+.+++...
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~---t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLG---TDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETT---SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cccccccccCCCCEEEEEECC---CCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 2357888876 44322 11 11112344556677789987776543
No 215
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=68.90 E-value=11 Score=37.80 Aligned_cols=63 Identities=10% Similarity=0.012 Sum_probs=42.2
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc--cccccccceecCCCcEEEEcCCCCCCCe
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ--SNVWCSSGAVRPDGVLIQTGGFNDGEKK 124 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~ 124 (535)
+++++++.|+.+ | .+.+||..+++-...-.. +.....+.++.++|+++++|+.+ ..
T Consensus 180 ~~~~~l~~~~~d----------~---------~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~ 237 (437)
T 3gre_A 180 EEKSLLVALTNL----------S---------RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR---GI 237 (437)
T ss_dssp SSCEEEEEEETT----------S---------EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT---SC
T ss_pred CCCCEEEEEeCC----------C---------eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC---Ce
Confidence 357888777643 2 578999988765332211 23333344566799999999874 57
Q ss_pred EEEEcCC
Q 009420 125 IRSFVPC 131 (535)
Q Consensus 125 v~~ydp~ 131 (535)
+++||..
T Consensus 238 i~iwd~~ 244 (437)
T 3gre_A 238 IDIWDIR 244 (437)
T ss_dssp EEEEETT
T ss_pred EEEEEcC
Confidence 9999987
No 216
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=68.69 E-value=31 Score=36.78 Aligned_cols=92 Identities=16% Similarity=0.128 Sum_probs=55.6
Q ss_pred ceeEEEECC-CC---CEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCC----cccc
Q 009420 78 AHSVEYSVL-TN---EFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLG----ARRW 149 (535)
Q Consensus 78 ~~~~~yDp~-t~---~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~----~~R~ 149 (535)
..+.++|.. ++ +.+.+...........+..+||++|+++.. ++...+.++|+. +.+++.+.+.. .+.|
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~-~~~~~l~~~~~~---~~~~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR-TGWWNLHRVDPA---TGAATQLCRREEEFAGPLW 292 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT-TSSCEEEEECTT---TCCEEESSCCSSBSSCCCC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC-CCCeEEEEEECC---CCceeecccccccccCccc
Confidence 357889998 57 444443221222223445689998877654 344578999987 67787765432 2344
Q ss_pred cc---eEEEecCCcEEEEcCccCCeeEEE
Q 009420 150 YA---TDHILPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 150 y~---s~~~L~dG~vyvvGG~~~~~~E~y 175 (535)
.+ +.+..+||++++.+.. ....+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 319 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK--GAAVLG 319 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS--SSCEEE
T ss_pred cccCceEeEeCCCEEEEEEEc--CccEEE
Confidence 32 3445568998888765 344555
No 217
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=68.43 E-value=1.4e+02 Score=32.48 Aligned_cols=139 Identities=12% Similarity=0.032 Sum_probs=73.7
Q ss_pred eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcc--cc-ccccccceecCCCcEEEEcCCCCCCC
Q 009420 47 NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFV--QS-NVWCSSGAVRPDGVLIQTGGFNDGEK 123 (535)
Q Consensus 47 ~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~--~~-~~~c~~~~~l~dG~l~v~GG~~~g~~ 123 (535)
.+|+|++.+|.. +| ..+||+++++++.... .. .....+.....+|+|++.. . .
T Consensus 481 ~~g~lWi~~~t~---------~G----------l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~----~ 536 (758)
T 3ott_A 481 NEGNVWVLLYNN---------KG----------IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H----G 536 (758)
T ss_dssp TTSCEEEEETTC---------SS----------EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T----T
T ss_pred CCCCEEEEccCC---------CC----------cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c----C
Confidence 477888766643 12 5789999999987632 11 1111123344578999653 2 2
Q ss_pred eEEEEcCCCCCCCCceecC--CCCcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCC
Q 009420 124 KIRSFVPCNDESCDWKEID--GLGARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENN 200 (535)
Q Consensus 124 ~v~~ydp~~~~~~~W~~~~--~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~ 200 (535)
-+.+|||. +.+++... .|+... -.+.+ ..+|+|++... ...-+| |.+. +..... +. .+
T Consensus 537 Gl~~~~~~---~~~~~~~~~~gl~~~~-i~~i~-~~~g~lWi~t~---~Gl~~~~~~~~--~~~~~~-~~--------~~ 597 (758)
T 3ott_A 537 GVMRINPK---DESQQSISFGSFSNNE-ILSMT-CVKNSIWVSTT---NGLWIIDRKTM--DARQQN-MT--------NK 597 (758)
T ss_dssp EEEEECC-----CCCCBCCCCC---CC-EEEEE-EETTEEEEEES---SCEEEEETTTC--CEEEC---C--------CC
T ss_pred ceEEEecC---CCceEEecccCCCccc-eEEEE-ECCCCEEEECC---CCeEEEcCCCc--eeEEec-CC--------CC
Confidence 47899998 66666543 333222 12333 34788888552 234455 6542 221111 10 01
Q ss_pred Ccce-EEEeeCCcEEEEecCeEEEEECCC
Q 009420 201 LYPF-VFLNVDGFLFIFANNRAILFDYVN 228 (535)
Q Consensus 201 ~yp~-~~~~~dG~ifv~gg~~~~~yDp~t 228 (535)
.+.. .+...+|+||+-+.+....|||+.
T Consensus 598 ~~~~~~~~~~~G~l~fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 598 RFTSLLFDPKEDCVYLGGADGFGISHSNL 626 (758)
T ss_dssp CCSEEEEETTTTEEEEECBSEEEEEEC--
T ss_pred ceeeeEEECCCCcEEEecCCceEEEChhh
Confidence 1222 233458999988888888999974
No 218
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=66.51 E-value=1e+02 Score=30.25 Aligned_cols=146 Identities=8% Similarity=0.030 Sum_probs=74.6
Q ss_pred eeEEEECCCCC--EEEC-----c-cccccccccceecCCC-cEEEEcCCCCCCCeEEEEcCCCCCCCCc-----eecCCC
Q 009420 79 HSVEYSVLTNE--FRPL-----F-VQSNVWCSSGAVRPDG-VLIQTGGFNDGEKKIRSFVPCNDESCDW-----KEIDGL 144 (535)
Q Consensus 79 ~~~~yDp~t~~--w~~~-----~-~~~~~~c~~~~~l~dG-~l~v~GG~~~g~~~v~~ydp~~~~~~~W-----~~~~~m 144 (535)
.+.+||..+.. +..+ . ..+.....+.++.++| .++++|+.+ ..+++||.. +.+. ..+..-
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~---~~~~~~~~~~~~~~~ 272 (447)
T 3dw8_B 199 RINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK---GTIRLCDMR---ASALCDRHSKLFEEP 272 (447)
T ss_dssp EEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT---SCEEEEETT---TCSSSCTTCEEECCC
T ss_pred eEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC---CeEEEEECc---CCccccceeeEeccC
Confidence 57889987422 2221 1 1122223344566788 899998874 579999987 4432 111111
Q ss_pred Ccc----------cccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCc----cccCCCcc--eEEE
Q 009420 145 GAR----------RWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDP----RVENNLYP--FVFL 207 (535)
Q Consensus 145 ~~~----------R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~----~~~~~~yp--~~~~ 207 (535)
..+ ..-.+++.-+||+.++.|+. ..+.+| ..........+..-...... ......+. .+..
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 350 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCW 350 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEE
T ss_pred CCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEE
Confidence 000 02335566678999988876 567778 33211111111100000000 00000000 1455
Q ss_pred eeCCcEEEEec--CeEEEEECCCCeEE
Q 009420 208 NVDGFLFIFAN--NRAILFDYVNNKVV 232 (535)
Q Consensus 208 ~~dG~ifv~gg--~~~~~yDp~t~~W~ 232 (535)
.++|+.++.|+ ..+.+||..+.+..
T Consensus 351 s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 351 NGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp CTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred CCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 68998888776 46789999988765
No 219
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=65.56 E-value=58 Score=34.56 Aligned_cols=90 Identities=16% Similarity=0.150 Sum_probs=50.0
Q ss_pred eeEEEECCCCCEEECcccccc-----cc---ccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCccccc
Q 009420 79 HSVEYSVLTNEFRPLFVQSNV-----WC---SSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWY 150 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~-----~c---~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y 150 (535)
.+..+|+.+++++++...... |. ...++.+||++++.+.. +...++.+|.. +.+...+..- . ...
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~d~~---~~~~~~l~~~-~-~~~ 338 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GAAVLGILDPE---SGELVDAAGP-W-TEW 338 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEEETT---TTEEEECCSS-C-CEE
T ss_pred EEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc--CccEEEEEECC---CCcEEEecCC-C-CeE
Confidence 578899989999887643211 11 12334468999888765 45667777876 5555555321 1 111
Q ss_pred ceEEEecCCcEEEEcCccCCeeEEE
Q 009420 151 ATDHILPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 151 ~s~~~L~dG~vyvvGG~~~~~~E~y 175 (535)
.......+++++++.+......++|
T Consensus 339 ~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 339 AATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEE
T ss_pred EEEEecCCCEEEEEEcCCCCCCEEE
Confidence 1221233445666655444344555
No 220
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=65.46 E-value=19 Score=36.15 Aligned_cols=155 Identities=19% Similarity=0.149 Sum_probs=0.0
Q ss_pred EEEEee-CCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCC
Q 009420 42 HMQLLN-NDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFND 120 (535)
Q Consensus 42 ~~~~~~-~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~ 120 (535)
|++++. +|+||.||-.+.+.. |.-...+......+-.+...++..+. .-..+..++..||+||..|-...
T Consensus 118 h~~al~~~G~v~~wG~n~~GqL------G~g~~~~~~~p~~v~~l~~~~i~~va---~G~~hs~alt~~G~v~~wG~n~~ 188 (389)
T 3kci_A 118 HCLALSSEGEVYSWGEAEDGKL------GHGNRSPCDRPRVIESLRGIEVVDVA---AGGAHSACVTAAGDLYTWGKGRY 188 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTT------CSSSCCCEEEEEECGGGTTSCEEEEE---ECSSEEEEEETTSCEEEEECCGG
T ss_pred eEEEEcCCCCEEEEeCCCCCcC------CCCCCccCcCCeEecccCCCeEEEEE---eCcCeEEEEeCCCeEEEeCCCCC
Q ss_pred C----CCeEEEEcCCCCCCCCceecCCCCccc---------ccceEEEecCCcEEEEc-------CccCCeeEEEeCCCC
Q 009420 121 G----EKKIRSFVPCNDESCDWKEIDGLGARR---------WYATDHILPDGRIIIIG-------GRRQFNYEFYPKNGA 180 (535)
Q Consensus 121 g----~~~v~~ydp~~~~~~~W~~~~~m~~~R---------~y~s~~~L~dG~vyvvG-------G~~~~~~E~yP~~~~ 180 (535)
+ ........|. .+..+...+ .+++++...||+||..| |.........|.
T Consensus 189 GqLG~~~~~~~~~p~--------~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~--- 257 (389)
T 3kci_A 189 GRLGHSDSEDQLKPK--------LVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPM--- 257 (389)
T ss_dssp GTTCSSSCCCEEEEE--------ECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEE---
T ss_pred CCcCCCCCcccccce--------EecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccE---
Q ss_pred CCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecCe
Q 009420 181 PNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANNR 220 (535)
Q Consensus 181 ~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~~ 220 (535)
..+.+....-.+.....+-.+++..+|+||.+|.+.
T Consensus 258 ----~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 258 ----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp ----ECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCG
T ss_pred ----EecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCC
No 221
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=65.04 E-value=7.4 Score=41.14 Aligned_cols=107 Identities=12% Similarity=0.096 Sum_probs=64.2
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeE
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKI 125 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v 125 (535)
-+||+.++++..+.+ ....+.++|+.+++++.+.... ......+..+||+.++.+.. ++...+
T Consensus 158 spDG~~la~~~~~~~---------------~~~~i~~~d~~~g~~~~l~~~~-~~~~~~~~SpDG~~l~~~~~-~~~~~i 220 (582)
T 3o4h_A 158 DIRGDLIAGLGFFGG---------------GRVSLFTSNLSSGGLRVFDSGE-GSFSSASISPGMKVTAGLET-AREARL 220 (582)
T ss_dssp EEETTEEEEEEEEET---------------TEEEEEEEETTTCCCEEECCSS-CEEEEEEECTTSCEEEEEEC-SSCEEE
T ss_pred CCCCCEEEEEEEcCC---------------CCeEEEEEcCCCCCceEeecCC-CccccceECCCCCEEEEccC-CCeeEE
Confidence 368877776654311 1135789999999998775322 22344567789998884432 344589
Q ss_pred EEEcCCCCCCCCceecCCCCcccccceEE--------EecCCcEEEEcCccCCeeEEE
Q 009420 126 RSFVPCNDESCDWKEIDGLGARRWYATDH--------ILPDGRIIIIGGRRQFNYEFY 175 (535)
Q Consensus 126 ~~ydp~~~~~~~W~~~~~m~~~R~y~s~~--------~L~dG~vyvvGG~~~~~~E~y 175 (535)
.++|.. +.+...+...... ....+ .-+||++++.+..++ ...+|
T Consensus 221 ~~~d~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~spdg~~~~~~~~~g-~~~l~ 272 (582)
T 3o4h_A 221 VTVDPR---DGSVEDLELPSKD--FSSYRPTAITWLGYLPDGRLAVVARREG-RSAVF 272 (582)
T ss_dssp EEECTT---TCCEEECCCSCSH--HHHHCCSEEEEEEECTTSCEEEEEEETT-EEEEE
T ss_pred EEEcCC---CCcEEEccCCCcC--hhhhhhccccceeEcCCCcEEEEEEcCC-cEEEE
Confidence 999998 6666533322111 11122 557998888876554 45555
No 222
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=61.85 E-value=20 Score=38.26 Aligned_cols=131 Identities=15% Similarity=0.114 Sum_probs=69.9
Q ss_pred CCCCCceeecCCCCCCcccccceeecCCCcEEEecCCCCccccccCCCCCceeeEEEEcCCCCCCCCCCCCCceecCCCc
Q 009420 359 NIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPHAYYNFTGVLFPTELSLEAFSPYYLDAPFANLRPTIVLPESQ 438 (535)
Q Consensus 359 t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppyl~~~~~~~RP~i~~~p~~ 438 (535)
.+.|.+|+....+.......+..+.++||+|+++.-.. . ......|.+..|... ..| . ..|..
T Consensus 305 ~D~G~tW~~~~~l~~~~~~Y~~l~~~~dg~i~~~ye~~-~-----------~i~~~~~~~~~l~~~---~~~-~-~~~~~ 367 (601)
T 1w8o_A 305 CDDGQTWPVSKVFQPGSMSYSTLTALPDGTYGLLYEPG-T-----------GIRYANFNLAWLGGI---CAP-F-TIPDV 367 (601)
T ss_dssp SSTTSCCCEEEEEEEEECCCEEEEECTTSCEEEEECCS-S-----------EEEEEEECHHHHTBC---SCC-E-ECCCE
T ss_pred CCCCCCCCCceEeCCCCCCCCeEEEcCCCeEEEEEecC-C-----------cceEEEecHHHhccc---cCC-C-cCccc
Confidence 45677998643221122222345557999999886422 1 234556677666542 122 2 34554
Q ss_pred cccccCCeEEEEEEecCc--cccceEEEEEEecCCccccCCCCcceEEeeeeeeeecCCc-ceEEEEEcCCCCCcCCCcc
Q 009420 439 FTLKYKQKFRVRFSASGP--VALNKVTVTMVAPSFNTHSFSMNQRLLVLASDTVTKLGNS-GYEIVVNSPGSGNLAPSGY 515 (535)
Q Consensus 439 ~~~~~g~~~~v~~~~~~~--~~~~~~~~~l~~~~~~TH~~~~~qR~v~L~~~~~~~~g~~-~~~~~~~~P~~~~~~ppG~ 515 (535)
. +..|++++|++....+ ......+++|..+...+= +- .+.. ...|.+ .-.++|++|.. +.+|.
T Consensus 368 ~-~~~g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~------~~-~~~~---~~~g~~~t~~~~vt~~~~---~~~g~ 433 (601)
T 1w8o_A 368 A-LEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQV------QG-SVEP---LMPGRQAKGQVTITVPAG---TTPGR 433 (601)
T ss_dssp E-ECTTCEEEEEEEEECCSSSCBSSCEEEEECCTTSEE------EE-EECC---BCTTCEEEEEEEEECCTT---CCCEE
T ss_pred e-ecCCceeEEEEEEECCCceeccCceEEEecCCCcEE------ec-cccc---cCCCCceEEEEEEecCCC---CCCCc
Confidence 3 8899888777655433 212335777766555441 11 1111 122322 12347778764 55899
Q ss_pred eEEEE
Q 009420 516 YLLFV 520 (535)
Q Consensus 516 ymlf~ 520 (535)
|+|=+
T Consensus 434 y~l~~ 438 (601)
T 1w8o_A 434 YRVGA 438 (601)
T ss_dssp EEEEE
T ss_pred EEeeE
Confidence 98744
No 223
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=60.67 E-value=1.8e+02 Score=30.96 Aligned_cols=81 Identities=12% Similarity=0.017 Sum_probs=49.1
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCC-----CCceecCCCCccc-----
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDES-----CDWKEIDGLGARR----- 148 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~-----~~W~~~~~m~~~R----- 148 (535)
.+.+||..+++...+...... ......-+||+.+++... ..+.++|.. + .+...+.......
T Consensus 102 ~i~~~d~~~~~~~~l~~~~~~-~~~~~~SpdG~~la~~~~----~~i~v~~~~---~~~~~~g~~~~~~~~~~~~~~~g~ 173 (706)
T 2z3z_A 102 GLVGFDMLARKVTYLFDTNEE-TASLDFSPVGDRVAYVRN----HNLYIARGG---KLGEGMSRAIAVTIDGTETLVYGQ 173 (706)
T ss_dssp EEEEEETTTTEEEEEECCTTC-CTTCEECTTSSEEEEEET----TEEEEEECB---CTTSCCCCCEESCSCCBTTEEESS
T ss_pred EEEEEECCCCceEEccCCccc-ccCCcCCCCCCEEEEEEC----CeEEEEecC---cccccCCCcEEeccCCCCCeEccc
Confidence 477899988877665432221 223456789987777522 578999987 5 5554443222211
Q ss_pred --------ccceEEEecCCcEEEEcCc
Q 009420 149 --------WYATDHILPDGRIIIIGGR 167 (535)
Q Consensus 149 --------~y~s~~~L~dG~vyvvGG~ 167 (535)
...+.+.-+||+.++++..
T Consensus 174 ~~~~ee~~~~~~~~~SpDg~~la~~~~ 200 (706)
T 2z3z_A 174 AVHQREFGIEKGTFWSPKGSCLAFYRM 200 (706)
T ss_dssp CCGGGCTTCCCSEEECTTSSEEEEEEE
T ss_pred chhhhhcCCCceEEECCCCCEEEEEEE
Confidence 1235566679998887763
No 224
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=60.45 E-value=54 Score=31.63 Aligned_cols=57 Identities=16% Similarity=0.173 Sum_probs=36.4
Q ss_pred eeEEEECCCCCEEECccccccccccceecC-CCcEEEEcCCC-------------CCCCeEEEEcCCCCCCCCceec
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRP-DGVLIQTGGFN-------------DGEKKIRSFVPCNDESCDWKEI 141 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~-dG~l~v~GG~~-------------~g~~~v~~ydp~~~~~~~W~~~ 141 (535)
.+.+||+.+++.+.+..... +. .+..+ ||+++++.+.. .+...+.++|+. +.+...+
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~---~~~~~~l 335 (396)
T 3c5m_A 265 VIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK---AKSAQKL 335 (396)
T ss_dssp EEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT---TTBCCEE
T ss_pred eEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc---cCceEEc
Confidence 47899999988776643221 22 44567 99988875421 133678999987 5554443
No 225
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=60.15 E-value=32 Score=33.36 Aligned_cols=82 Identities=15% Similarity=0.139 Sum_probs=49.0
Q ss_pred eeEEEECCCCCEEECcccc-ccccccceecCCCcEEEEcCCCCCCC--eEEEEcCCCCCCCCceecCCCCcccccceEEE
Q 009420 79 HSVEYSVLTNEFRPLFVQS-NVWCSSGAVRPDGVLIQTGGFNDGEK--KIRSFVPCNDESCDWKEIDGLGARRWYATDHI 155 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~-~~~c~~~~~l~dG~l~v~GG~~~g~~--~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~ 155 (535)
.+.++|..+++++.+.... .......++.+||+.+++.....+.. .+.++|.. +.+...+..++ .+. .+.
T Consensus 217 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~---~g~~~~l~~~~--~~~--~~~ 289 (396)
T 3c5m_A 217 RMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE---TLENEEVMVMP--PCS--HLM 289 (396)
T ss_dssp CCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT---TCCEEEEEECC--SEE--EEE
T ss_pred eEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC---CCCeEEeeeCC--CCC--CCc
Confidence 4678999888888775421 22233345667998655554333333 49999987 66655544332 121 445
Q ss_pred ec-CCcEEEEcCc
Q 009420 156 LP-DGRIIIIGGR 167 (535)
Q Consensus 156 L~-dG~vyvvGG~ 167 (535)
.+ ||++++..+.
T Consensus 290 s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 290 SNFDGSLMVGDGC 302 (396)
T ss_dssp ECSSSSEEEEEEC
T ss_pred cCCCCceEEEecC
Confidence 56 8887776543
No 226
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=59.93 E-value=1.9e+02 Score=31.22 Aligned_cols=161 Identities=11% Similarity=-0.004 Sum_probs=81.0
Q ss_pred eeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCC----
Q 009420 46 LNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDG---- 121 (535)
Q Consensus 46 ~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g---- 121 (535)
-+||+.+++.....|. ....+.++|..+++..+.... .......+..+| +-++++.....
T Consensus 171 SPDG~~la~~~~~~G~--------------e~~~i~v~dl~tg~~~~~~~~-~~~~~~~~wspD-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 171 SDDGRLLAYSVQDGGS--------------DWRTVKFVGVADGKPLADELK-WVKFSGLAWLGN-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp CTTSSEEEEEEEETTC--------------SEEEEEEEETTTCCEEEEEEE-EEESCCCEESTT-SEEEEEECCCC----
T ss_pred CCCCCEEEEEEcCCCC--------------ceEEEEEEECCCCCCCCccCC-CceeccEEEECC-CEEEEEEecCccccc
Confidence 4788888777543111 123688999999998765321 111234556778 65555543221
Q ss_pred -------CCeEEEEcCCCCCCCCc--eec-CCCCcccccceEEEecCCcEEEEcCccC--CeeEEE--eCCCC-CC-eee
Q 009420 122 -------EKKIRSFVPCNDESCDW--KEI-DGLGARRWYATDHILPDGRIIIIGGRRQ--FNYEFY--PKNGA-PN-VYS 185 (535)
Q Consensus 122 -------~~~v~~ydp~~~~~~~W--~~~-~~m~~~R~y~s~~~L~dG~vyvvGG~~~--~~~E~y--P~~~~-~~-w~~ 185 (535)
...+.+++.. +..- ..+ ..-..+++..+...-+||+.+++...+. ...++| +.... .. +..
T Consensus 235 ~~~~~~~~~~v~~~~lg---t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 311 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLG---TPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTA 311 (741)
T ss_dssp ----CCCCCEEEEEETT---SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEE
T ss_pred ccccCCCCCEEEEEECC---CCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEE
Confidence 2357777765 3321 111 1111233455666778997666654432 233554 33211 02 332
Q ss_pred eccccccCCccccCCCcceEEEeeCCc-EEEEec-----CeEEEEECCC--CeEEEec
Q 009420 186 LPFLVQTNDPRVENNLYPFVFLNVDGF-LFIFAN-----NRAILFDYVN--NKVVKQY 235 (535)
Q Consensus 186 ~~~l~~~~~~~~~~~~yp~~~~~~dG~-ifv~gg-----~~~~~yDp~t--~~W~~~~ 235 (535)
+. ...+ ...++ +.++|+ ||+..+ ....++|..+ ..|...+
T Consensus 312 l~---~~~~----~~~~~---~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 312 LI---PDLK----AQWDF---VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp EE---CSSS----SCEEE---EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE
T ss_pred ec---CCCC----ceEEE---EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe
Confidence 21 1111 11222 236766 555443 2477888877 5787544
No 227
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=59.38 E-value=1.4e+02 Score=29.32 Aligned_cols=62 Identities=16% Similarity=0.028 Sum_probs=36.9
Q ss_pred CCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCC-cEEEEcCCCCCCCeEE
Q 009420 48 NDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDG-VLIQTGGFNDGEKKIR 126 (535)
Q Consensus 48 ~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG-~l~v~GG~~~g~~~v~ 126 (535)
+|++++-++.+ .++.+||..++.-......+.....+.++-+++ .+++.|+.+ ..++
T Consensus 155 d~~~las~s~D-------------------~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d---~~v~ 212 (393)
T 4gq1_A 155 AEQVIASVGDD-------------------CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN---GNIR 212 (393)
T ss_dssp EEEEEEEEETT-------------------SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT---SEEE
T ss_pred CCCEEEEEECC-------------------CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC---CEEE
Confidence 67777777754 257899987664222111111111233455666 477777663 6799
Q ss_pred EEcCC
Q 009420 127 SFVPC 131 (535)
Q Consensus 127 ~ydp~ 131 (535)
+||..
T Consensus 213 ~wd~~ 217 (393)
T 4gq1_A 213 IFDWT 217 (393)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99987
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=56.87 E-value=69 Score=30.74 Aligned_cols=75 Identities=12% Similarity=-0.024 Sum_probs=45.7
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCC----cccccceEE
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLG----ARRWYATDH 154 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~----~~R~y~s~~ 154 (535)
.+.+||+.+++.+...... ...+.+..+||++++... ..+.+||+. +.+.+.+.... ..| -...+
T Consensus 72 ~i~~~d~~~~~~~~~~~~~--~v~~i~~~~dg~l~v~~~-----~gl~~~d~~---~g~~~~~~~~~~~~~~~~-~~~i~ 140 (326)
T 2ghs_A 72 ELHELHLASGRKTVHALPF--MGSALAKISDSKQLIASD-----DGLFLRDTA---TGVLTLHAELESDLPGNR-SNDGR 140 (326)
T ss_dssp EEEEEETTTTEEEEEECSS--CEEEEEEEETTEEEEEET-----TEEEEEETT---TCCEEEEECSSTTCTTEE-EEEEE
T ss_pred EEEEEECCCCcEEEEECCC--cceEEEEeCCCeEEEEEC-----CCEEEEECC---CCcEEEEeeCCCCCCCCC-CCCEE
Confidence 4788999988776543222 122234557899888642 348899998 67766554321 122 22455
Q ss_pred EecCCcEEEE
Q 009420 155 ILPDGRIIII 164 (535)
Q Consensus 155 ~L~dG~vyvv 164 (535)
.-+||++|+.
T Consensus 141 ~d~~G~l~v~ 150 (326)
T 2ghs_A 141 MHPSGALWIG 150 (326)
T ss_dssp ECTTSCEEEE
T ss_pred ECCCCCEEEE
Confidence 5668888774
No 229
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=54.96 E-value=2.3e+02 Score=30.50 Aligned_cols=95 Identities=9% Similarity=0.073 Sum_probs=50.0
Q ss_pred EeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCC--EEECcccc-----ccccc---cceecCCCcEEE
Q 009420 45 LLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNE--FRPLFVQS-----NVWCS---SGAVRPDGVLIQ 114 (535)
Q Consensus 45 ~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~--w~~~~~~~-----~~~c~---~~~~l~dG~l~v 114 (535)
++.+|+||+.... ..+..+|.+|++ |+.-.... ...|. .+..+.+++||+
T Consensus 63 ~v~~g~vyv~~~~--------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 122 (668)
T 1kv9_A 63 LFHDGVIYTSMSW--------------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYV 122 (668)
T ss_dssp EEETTEEEEEEGG--------------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEE
T ss_pred EEECCEEEEECCC--------------------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEE
Confidence 3468888877641 146788988876 76543211 12231 223445778877
Q ss_pred EcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccc-cceEEEecCCcEEEE
Q 009420 115 TGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRW-YATDHILPDGRIIII 164 (535)
Q Consensus 115 ~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~-y~s~~~L~dG~vyvv 164 (535)
.... ..+..+|..+ ++-.|+.-..-....+ ..+.-++.+|+||+.
T Consensus 123 ~~~d----g~l~alD~~t-G~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg 168 (668)
T 1kv9_A 123 GTLD----GRLIALDAKT-GKAIWSQQTTDPAKPYSITGAPRVVKGKVIIG 168 (668)
T ss_dssp ECTT----SEEEEEETTT-CCEEEEEECSCTTSSCBCCSCCEEETTEEEEC
T ss_pred EcCC----CEEEEEECCC-CCEeeeeccCCCCCcceecCCCEEECCEEEEe
Confidence 5432 4688899872 1335875331111111 112223347888774
No 230
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=53.51 E-value=68 Score=36.57 Aligned_cols=84 Identities=6% Similarity=-0.123 Sum_probs=50.8
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCC-------CCCeEEEEcCCCCCCCCceecCCCCcccccc
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFND-------GEKKIRSFVPCNDESCDWKEIDGLGARRWYA 151 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~-------g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~ 151 (535)
.+.+||..+++...+...+.......++-+||+.+++++... ....+.+||.. +.+...+..-. ....
T Consensus 401 ~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~---~g~~~~l~~~~--~~~~ 475 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME---GRKIFAATTEN--SHDY 475 (1045)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT---TTEEEECSCSS--SBEE
T ss_pred eEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC---CCcEEEeeCCC--cccC
Confidence 578999999988776533333333445678999888765421 23579999987 55544443211 1112
Q ss_pred eEEEecCCcEEEEcCc
Q 009420 152 TDHILPDGRIIIIGGR 167 (535)
Q Consensus 152 s~~~L~dG~vyvvGG~ 167 (535)
..+.-+||+.++++..
T Consensus 476 ~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 476 APAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEECTTSCEEEEEES
T ss_pred CceEcCCCCEEEEEec
Confidence 3456678886665543
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=51.07 E-value=1.5e+02 Score=27.12 Aligned_cols=138 Identities=17% Similarity=0.102 Sum_probs=71.9
Q ss_pred eeEEEECCCCCEEECccccccccccceecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecC--CCCcccccceEEE
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRP-DGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEID--GLGARRWYATDHI 155 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~--~m~~~R~y~s~~~ 155 (535)
.+.++|+....-+.+....-....+.++-+ +|+||+.-... ....++++++. ...-+.+. .+..++ +.+.
T Consensus 102 ~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~-~~~~I~~~~~d---g~~~~~~~~~~~~~P~---gia~ 174 (267)
T 1npe_A 102 RIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR-DNPKIETSHMD---GTNRRILAQDNLGLPN---GLTF 174 (267)
T ss_dssp EEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS-SSCEEEEEETT---SCCCEEEECTTCSCEE---EEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC-CCcEEEEEecC---CCCcEEEEECCCCCCc---EEEE
Confidence 467777765433322111112233444555 68899885321 13578888886 32222221 232222 3344
Q ss_pred ecC-CcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEe--cCeEEEEECCCCeE
Q 009420 156 LPD-GRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFA--NNRAILFDYVNNKV 231 (535)
Q Consensus 156 L~d-G~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~g--g~~~~~yDp~t~~W 231 (535)
-++ +++|+.--.. ..+..+ +.. .- ....+. ...+|......+++||+.. ++.+.++|+++++.
T Consensus 175 d~~~~~lyv~d~~~-~~I~~~~~~g---~~-~~~~~~--------~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 175 DAFSSQLCWVDAGT-HRAECLNPAQ---PG-RRKVLE--------GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp ETTTTEEEEEETTT-TEEEEEETTE---EE-EEEEEE--------CCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEE
T ss_pred cCCCCEEEEEECCC-CEEEEEecCC---Cc-eEEEec--------CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCc
Confidence 443 6788875432 345555 321 11 001111 1235666666678899874 46789999998887
Q ss_pred EEecC
Q 009420 232 VKQYP 236 (535)
Q Consensus 232 ~~~~p 236 (535)
...++
T Consensus 242 ~~~i~ 246 (267)
T 1npe_A 242 MDTFH 246 (267)
T ss_dssp EEEEC
T ss_pred eEEEc
Confidence 65554
No 232
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=51.06 E-value=1.3e+02 Score=30.64 Aligned_cols=133 Identities=11% Similarity=0.069 Sum_probs=67.9
Q ss_pred CCcEEEEec-CeEEEEECCCCeEEEecCCCCCCCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCCCCcccccccccc
Q 009420 210 DGFLFIFAN-NRAILFDYVNNKVVKQYPAIPGGDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAPKGAYEQAEKGVF 288 (535)
Q Consensus 210 dG~ifv~gg-~~~~~yDp~t~~W~~~~p~~p~~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~~~~~~~~~~~~~ 288 (535)
+|+||+.-. +.+.++|+++++... +.. . -.+| .+.+ + . .+++||++--.....
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v~~-~~~-~----~~~P-~gia-v-d--------~dG~lyVad~~~~~~--------- 205 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYVDI-KTT-N----IGQC-ADVN-F-T--------LNGDMVVVDDQSSDT--------- 205 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEEEE-ECC-C----CSCE-EEEE-E-C--------TTCCEEEEECCSCTT---------
T ss_pred CCEEEEEeCCCCEEEEECCCCEEEE-eec-C----CCCc-cEEE-E-C--------CCCCEEEEcCCCCcc---------
Confidence 389998754 678899999888774 321 1 1122 1222 2 1 266788885321100
Q ss_pred cccCCceEEEEecCCCCCee---ee-cCCCCceeceeEEcc-CCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCC
Q 009420 289 VAALNTCARIKITDPTPTWV---LE-TMPQPRVMGDMTLLP-NGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGS 363 (535)
Q Consensus 289 ~pa~~s~e~~d~~~~~~~W~---~~-~m~~~R~~~~~v~lp-dG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~ 363 (535)
...+..++.. ..|. .. .+..|+ +.++-+ +|.||+.--.. ..+.+|||.+.
T Consensus 206 ---~~gv~~~~~~---~~~~~~~~~~~~~~P~---giavd~~~G~lyv~d~~~-------------~~V~~~d~~~g--- 260 (433)
T 4hw6_A 206 ---NTGIYLFTRA---SGFTERLSLCNARGAK---TCAVHPQNGKIYYTRYHH-------------AMISSYDPATG--- 260 (433)
T ss_dssp ---SEEEEEECGG---GTTCCEEEEEECSSBC---CCEECTTTCCEEECBTTC-------------SEEEEECTTTC---
T ss_pred ---cceEEEEECC---CCeeccccccccCCCC---EEEEeCCCCeEEEEECCC-------------CEEEEEECCCC---
Confidence 1112223322 2232 12 333332 345567 89999864211 25789999866
Q ss_pred ce-eec-CCCCCCcccccceeecCCCc-EEEecCC
Q 009420 364 RF-DLQ-NPSTIPRMYHSTAVLLRDGR-VLVGGSN 395 (535)
Q Consensus 364 ~W-t~~-~~~~~~R~yhs~a~LlpDG~-V~v~GG~ 395 (535)
+. +.+ .....+..+ + .++.+||+ +||+=..
T Consensus 261 ~~~~~~~~~~~~~~~~-~-ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 261 TLTEEEVMMDTKGSNF-H-IVWHPTGDWAYIIYNG 293 (433)
T ss_dssp CEEEEEEECSCCSSCE-E-EEECTTSSEEEEEETT
T ss_pred eEEEEEeccCCCCCcc-c-EEEeCCCCEEEEEeCC
Confidence 44 222 111112222 2 44568887 8888543
No 233
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=50.57 E-value=1.4e+02 Score=29.68 Aligned_cols=135 Identities=10% Similarity=-0.004 Sum_probs=62.9
Q ss_pred eeEEEECCCCCEE-ECcccc--ccccccceecCCCcEEEEcCCC-------CC--CCeEEEEcCCCCCCCCceecC--CC
Q 009420 79 HSVEYSVLTNEFR-PLFVQS--NVWCSSGAVRPDGVLIQTGGFN-------DG--EKKIRSFVPCNDESCDWKEID--GL 144 (535)
Q Consensus 79 ~~~~yDp~t~~w~-~~~~~~--~~~c~~~~~l~dG~l~v~GG~~-------~g--~~~v~~ydp~~~~~~~W~~~~--~m 144 (535)
++.+||++|++-. .+..-+ .......++-+||++++++... .+ ...++++|+. +.+-...- .+
T Consensus 204 TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~---tgk~l~v~~~~~ 280 (356)
T 2w18_A 204 NIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK---TTLSVGVMLYCL 280 (356)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT---TTEEEEEEEECC
T ss_pred cEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC---CCEEEEEEEeec
Confidence 6789999999853 332111 1122223466799988765531 01 3678899987 44322110 01
Q ss_pred CcccccceEEEecCCcEEEEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEecC--eE
Q 009420 145 GARRWYATDHILPDGRIIIIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFANN--RA 221 (535)
Q Consensus 145 ~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~--~~ 221 (535)
+.++.......-.+|.+.+.|+.+ .++.+| ..+. +.. ..+....+ .-...+...|||++++.|.. .+
T Consensus 281 p~Gh~~~~lsg~~sg~~lASgS~D-gTIkIWDl~tG--k~l--~tL~gH~~-----~vvs~vafSPDG~~LaSGS~D~TI 350 (356)
T 2w18_A 281 PPGQAGRFLEGDVKDHCAAAILTS-GTIAIWDLLLG--QCT--ALLPPVSD-----QHWSFVKWSGTDSHLLAGQKDGNI 350 (356)
T ss_dssp CTTCCCCEEEEEEETTEEEEEETT-SCEEEEETTTC--SEE--EEECCC-------CCCCEEEECSSSSEEEEECTTSCE
T ss_pred cCCCcceeEccccCCCEEEEEcCC-CcEEEEECCCC--cEE--EEecCCCC-----CeEEEEEECCCCCEEEEEECCCcE
Confidence 112110000000124455555444 467777 3331 211 11211111 11122345689998888863 46
Q ss_pred EEEEC
Q 009420 222 ILFDY 226 (535)
Q Consensus 222 ~~yDp 226 (535)
.+||.
T Consensus 351 klWd~ 355 (356)
T 2w18_A 351 FVYHY 355 (356)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 66664
No 234
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=49.95 E-value=41 Score=31.54 Aligned_cols=102 Identities=18% Similarity=0.369 Sum_probs=57.7
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCC-CCcccc--cceEEEecCCcEEEEcCccCCeeEEE-eCCCCC
Q 009420 106 VRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDG-LGARRW--YATDHILPDGRIIIIGGRRQFNYEFY-PKNGAP 181 (535)
Q Consensus 106 ~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~-m~~~R~--y~s~~~L~dG~vyvvGG~~~~~~E~y-P~~~~~ 181 (535)
+-+||+||++ . + ..+...+|.++....|...+. +-..=| .-+...-+||.+|++ .++.-+.+- |....+
T Consensus 48 f~P~G~LYaV--~-~--G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~ 120 (236)
T 1tl2_A 48 LSPGGELYGV--L-N--DKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTD 120 (236)
T ss_dssp ECTTSCEEEE--E-T--TEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC
T ss_pred ECCCccEEEE--e-C--CeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCC
Confidence 4469999999 2 2 357888886433567866531 111111 234555568999998 443222222 334445
Q ss_pred Ceeee-ccccccCCccccCCCcceEEEeeCCcEEEEecC
Q 009420 182 NVYSL-PFLVQTNDPRVENNLYPFVFLNVDGFLFIFANN 219 (535)
Q Consensus 182 ~w~~~-~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg~ 219 (535)
.|... ..+-+ -.+.-+.+.+..|+|.||.+.+.
T Consensus 121 ~Wl~~a~~vg~-----~gw~~~~~lff~p~G~Lyav~dg 154 (236)
T 1tl2_A 121 NWIARATEVGS-----GGWSGFKFLFFHPNGYLYAVHGQ 154 (236)
T ss_dssp CHHHHSEEEEC-----SSGGGEEEEEECTTSCEEEEETT
T ss_pred ceeccccEecc-----CCCCceEEEEECCCceEEEEeCC
Confidence 67421 11111 12344667888899999988843
No 235
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=46.11 E-value=1.1e+02 Score=29.62 Aligned_cols=49 Identities=14% Similarity=0.010 Sum_probs=26.8
Q ss_pred eeEEEECC-CCCEEECccc---c-ccccccceecCCCcEEEEcCCCCCCCeEEEEc
Q 009420 79 HSVEYSVL-TNEFRPLFVQ---S-NVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFV 129 (535)
Q Consensus 79 ~~~~yDp~-t~~w~~~~~~---~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~yd 129 (535)
.+.+||.. +++.+.+... . .....+.++-+||+.+.+....+ ..+.+|+
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~--~~v~v~~ 221 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG--NRICEYV 221 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT--TEEEEEE
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC--CeEEEEE
Confidence 57889987 7777544311 1 11222345668997554443322 4566664
No 236
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=46.07 E-value=94 Score=31.49 Aligned_cols=116 Identities=9% Similarity=0.089 Sum_probs=59.4
Q ss_pred CCCceEEcccCCCcceeEEEEeeCCe-EEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEE---ECccccccc
Q 009420 25 AGGGWQLLQKSIGISSMHMQLLNNDR-VVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFR---PLFVQSNVW 100 (535)
Q Consensus 25 ~~g~W~~l~~~~~~~~~~~~~~~~gk-v~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~---~~~~~~~~~ 100 (535)
..++.+.+.. ...++.+.++-++|+ ||+.+..+ + .. ...+..+++. ++|. .+. .-..
T Consensus 167 ~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~-~--~~------------~~~v~~~~~~-g~~~~~~~l~--~~~~ 227 (430)
T 3tc9_A 167 EKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQN-N--ND------------RPNNYILTRE-SGFKVITELT--KGQN 227 (430)
T ss_dssp TTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCS-C--TT------------SEEEEEEEGG-GTSCSEEEEE--ECSS
T ss_pred CCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCC-C--cc------------cceEEEEeCC-Cceeeeeeec--cCCC
Confidence 3344444433 223455666656666 77776432 1 00 1134455553 3332 222 1233
Q ss_pred cccceecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCc-EEEEc
Q 009420 101 CSSGAVRP-DGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGR-IIIIG 165 (535)
Q Consensus 101 c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~-vyvvG 165 (535)
+.+.++.+ +|+||+.-- +...+.+||+. ...-..+..+....|-...+.-++|+ +|++-
T Consensus 228 p~giavdp~~g~lyv~d~---~~~~V~~~~~~---~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSW---NAGQVFRYDFT---TQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp CCCEEECTTTCCEEEEET---TTTEEEEEETT---TTEEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEeCCCCEEEEEEC---CCCEEEEEECC---CCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 45556667 899998742 23579999997 44332222222112222566667887 88863
No 237
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=44.53 E-value=2.1e+02 Score=27.12 Aligned_cols=27 Identities=15% Similarity=0.063 Sum_probs=21.5
Q ss_pred EeeCCcEEEEecCeEEEEECCCCeEEE
Q 009420 207 LNVDGFLFIFANNRAILFDYVNNKVVK 233 (535)
Q Consensus 207 ~~~dG~ifv~gg~~~~~yDp~t~~W~~ 233 (535)
..++|++++.....+.+||+++++...
T Consensus 97 ~~~dg~l~v~~~~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 97 KISDSKQLIASDDGLFLRDTATGVLTL 123 (326)
T ss_dssp EEETTEEEEEETTEEEEEETTTCCEEE
T ss_pred EeCCCeEEEEECCCEEEEECCCCcEEE
Confidence 457899888877778899999888763
No 238
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=44.44 E-value=1.5e+02 Score=31.36 Aligned_cols=28 Identities=18% Similarity=0.298 Sum_probs=21.0
Q ss_pred EeeCCcEEEEec-CeEEEEECCCC--eEEEe
Q 009420 207 LNVDGFLFIFAN-NRAILFDYVNN--KVVKQ 234 (535)
Q Consensus 207 ~~~dG~ifv~gg-~~~~~yDp~t~--~W~~~ 234 (535)
++.+|+||+... ..+..+|.+++ .|...
T Consensus 65 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~ 95 (582)
T 1flg_A 65 IVSDGVIYVTASYSRLFALDAKTGKRLWTYN 95 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred EEECCEEEEEcCCCCEEEEECCCCcEEEEEc
Confidence 346999999876 56889999875 47653
No 239
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=43.78 E-value=1.6e+02 Score=31.46 Aligned_cols=105 Identities=14% Similarity=0.081 Sum_probs=59.6
Q ss_pred eeEEEEe-eCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCE--------EECc---cccccccccceec
Q 009420 40 SMHMQLL-NNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEF--------RPLF---VQSNVWCSSGAVR 107 (535)
Q Consensus 40 ~~~~~~~-~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w--------~~~~---~~~~~~c~~~~~l 107 (535)
.+|+++. +||+.++.|+.+ | .+.+||..+++- ..+. ..+..+-.+.+..
T Consensus 131 sv~svafSPDG~~LAsgs~D----------G---------tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS 191 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNED----------G---------ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY 191 (588)
T ss_dssp CEEEEEECSSSSCEEEEETT----------S---------EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCC----------C---------EEEEEECCCCccccccceeeeeeecccccccccEEEEEEc
Confidence 4665554 688888888743 2 588999998752 2221 1122344455677
Q ss_pred CCCcEEEEcCCCCCCCeEEEEcCCCCCCCC----ceecCCCCcccccceEEEecCCcEEEEcCccCCeeEEEe
Q 009420 108 PDGVLIQTGGFNDGEKKIRSFVPCNDESCD----WKEIDGLGARRWYATDHILPDGRIIIIGGRRQFNYEFYP 176 (535)
Q Consensus 108 ~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~----W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP 176 (535)
+|| +++++.+ +.++++|.. .+. |..+.. ..|..-..+... |.++++++. .++.+|.
T Consensus 192 Pdg--Laass~D---~tVrlWd~~---~~~~~~~~~tL~~--~h~~~V~svaFs-g~~LASa~~--~tIkLWd 251 (588)
T 2j04_A 192 EDV--LVAALSN---NSVFSMTVS---ASSHQPVSRMIQN--ASRRKITDLKIV-DYKVVLTCP--GYVHKID 251 (588)
T ss_dssp TTE--EEEEETT---CCEEEECCC---SSSSCCCEEEEEC--CCSSCCCCEEEE-TTEEEEECS--SEEEEEE
T ss_pred CCc--EEEEeCC---CeEEEEECC---CCccccceeeecc--cccCcEEEEEEE-CCEEEEEeC--CeEEEEE
Confidence 899 4555442 789999987 433 222211 223222233333 577777763 4677773
No 240
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=43.61 E-value=69 Score=31.98 Aligned_cols=89 Identities=10% Similarity=0.152 Sum_probs=45.9
Q ss_pred eeEEEECCCCC-EEECcc--ccccccccceecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCC-cccccceE
Q 009420 79 HSVEYSVLTNE-FRPLFV--QSNVWCSSGAVRPDGV-LIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLG-ARRWYATD 153 (535)
Q Consensus 79 ~~~~yDp~t~~-w~~~~~--~~~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~-~~R~y~s~ 153 (535)
.+.+||..+.. ...+.. .+.....+.++.+++. ++++|+.+ ..+.+||.. ... ..+..+. ....-.++
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d---g~v~vwd~~---~~~-~~~~~~~~h~~~v~~i 327 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD---KTVALWDLR---NLK-LKLHSFESHKDEIFQV 327 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT---SEEEEEETT---CTT-SCSEEEECCSSCEEEE
T ss_pred eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC---CeEEEEeCC---CCC-CCeEEeecCCCCEEEE
Confidence 57889988763 111111 1222222344556776 88888864 579999986 311 1111111 11122244
Q ss_pred EEecCC-cEEEEcCccCCeeEEE
Q 009420 154 HILPDG-RIIIIGGRRQFNYEFY 175 (535)
Q Consensus 154 ~~L~dG-~vyvvGG~~~~~~E~y 175 (535)
+..++| .+++.|+.++ .+.+|
T Consensus 328 ~~sp~~~~~l~s~~~d~-~i~iw 349 (430)
T 2xyi_A 328 QWSPHNETILASSGTDR-RLHVW 349 (430)
T ss_dssp EECSSCTTEEEEEETTS-CCEEE
T ss_pred EECCCCCCEEEEEeCCC-cEEEE
Confidence 555566 5788887654 34444
No 241
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=43.47 E-value=1.5e+02 Score=28.93 Aligned_cols=116 Identities=11% Similarity=0.068 Sum_probs=61.8
Q ss_pred CCceEEcccCCCcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcccc-----ccc
Q 009420 26 GGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQS-----NVW 100 (535)
Q Consensus 26 ~g~W~~l~~~~~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~-----~~~ 100 (535)
.-+++.+... -..+.+.+..++|++||.... | .+.++| +++.+.+.... ...
T Consensus 20 ~~~~~~va~~-l~~P~~ia~~pdG~l~V~e~~-----------g---------~I~~i~--~g~~~~~~~~~v~~~g~~~ 76 (352)
T 2ism_A 20 GLRVEEVVGG-LEVPWALAFLPDGGMLIAERP-----------G---------RIRLFR--EGRLSTYAELSVYHRGESG 76 (352)
T ss_dssp CCCEEEEECC-CSCEEEEEECTTSCEEEEETT-----------T---------EEEEEE--TTEEEEEEECCCCCSTTCS
T ss_pred CcEEEEEECC-CCCceEEEEcCCCeEEEEeCC-----------C---------eEEEEE--CCCccEeecceEeecCCCC
Confidence 3467776542 234667777899999988642 2 245555 34443332111 122
Q ss_pred cccceecCC----CcEEEEcCCCC--CCCeEEEEcCCCCCCCCce---ec-CCCC---cc-cccceEEEecCCcEEEEcC
Q 009420 101 CSSGAVRPD----GVLIQTGGFND--GEKKIRSFVPCNDESCDWK---EI-DGLG---AR-RWYATDHILPDGRIIIIGG 166 (535)
Q Consensus 101 c~~~~~l~d----G~l~v~GG~~~--g~~~v~~ydp~~~~~~~W~---~~-~~m~---~~-R~y~s~~~L~dG~vyvvGG 166 (535)
..+.++.+| +.|||.--... ....+.+|+.. .+++. .+ ..++ .. +.....+.-+||++|+.-|
T Consensus 77 p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~---~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 77 LLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL---GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC---SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred ceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC---CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 334445555 78998742211 11467888876 33332 11 1122 11 2223566777999999866
Q ss_pred c
Q 009420 167 R 167 (535)
Q Consensus 167 ~ 167 (535)
.
T Consensus 154 ~ 154 (352)
T 2ism_A 154 E 154 (352)
T ss_dssp C
T ss_pred C
Confidence 4
No 242
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=43.02 E-value=48 Score=35.97 Aligned_cols=97 Identities=10% Similarity=0.118 Sum_probs=52.7
Q ss_pred CcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCC--------ceeceeEEccCCeEEEEcCCC
Q 009420 266 AAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQP--------RVMGDMTLLPNGNVLLINGAG 336 (535)
Q Consensus 266 ~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~--------R~~~~~v~lpdG~I~vvGG~~ 336 (535)
+++||+.... ..+.++|..+....|+.. ..+.. ....+ +++-+++||+... +
T Consensus 66 ~g~vyv~~~~-----------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~-d 126 (668)
T 1kv9_A 66 DGVIYTSMSW-----------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRG-VALWGDKVYVGTL-D 126 (668)
T ss_dssp TTEEEEEEGG-----------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCC-CEEEBTEEEEECT-T
T ss_pred CCEEEEECCC-----------------CeEEEEECCCChhceEECCCCCccccccccccCCccc-eEEECCEEEEEcC-C
Confidence 8899887542 235667776656678875 32211 01112 2344888887432 1
Q ss_pred CCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCC
Q 009420 337 KGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSN 395 (535)
Q Consensus 337 ~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~ 395 (535)
+ .+.++|+++.+ ..|+.-..-.........+.++.+|+|||..+.
T Consensus 127 -g------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~ 171 (668)
T 1kv9_A 127 -G------------RLIALDAKTGK-AIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGG 171 (668)
T ss_dssp -S------------EEEEEETTTCC-EEEEEECSCTTSSCBCCSCCEEETTEEEECCBC
T ss_pred -C------------EEEEEECCCCC-EeeeeccCCCCCcceecCCCEEECCEEEEeCCC
Confidence 1 46889988762 258764321111122223334458899886543
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=42.29 E-value=1.2e+02 Score=28.82 Aligned_cols=79 Identities=11% Similarity=0.094 Sum_probs=43.3
Q ss_pred eEEEECCCCCEEECccc----cccccccceecC-CCcEEEEcCCC--------------CCCCeEEEEcCCCCCCCCcee
Q 009420 80 SVEYSVLTNEFRPLFVQ----SNVWCSSGAVRP-DGVLIQTGGFN--------------DGEKKIRSFVPCNDESCDWKE 140 (535)
Q Consensus 80 ~~~yDp~t~~w~~~~~~----~~~~c~~~~~l~-dG~l~v~GG~~--------------~g~~~v~~ydp~~~~~~~W~~ 140 (535)
+..||+.+++.+.+... ...+....++.+ +|+||+.-... .....+.+||+. +.+.+.
T Consensus 103 i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~---~~~~~~ 179 (322)
T 2fp8_A 103 LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS---TKETTL 179 (322)
T ss_dssp EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT---TTEEEE
T ss_pred EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC---CCEEEE
Confidence 56788887766554321 112334456677 89999974221 112468899987 554433
Q ss_pred cC-CCCcccccceEEEecCCc-EEEE
Q 009420 141 ID-GLGARRWYATDHILPDGR-IIII 164 (535)
Q Consensus 141 ~~-~m~~~R~y~s~~~L~dG~-vyvv 164 (535)
+. .+. .-...+.-+||+ +||.
T Consensus 180 ~~~~~~---~p~gia~~~dg~~lyv~ 202 (322)
T 2fp8_A 180 LLKELH---VPGGAEVSADSSFVLVA 202 (322)
T ss_dssp EEEEES---CCCEEEECTTSSEEEEE
T ss_pred eccCCc---cCcceEECCCCCEEEEE
Confidence 21 222 122445555776 6665
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=41.29 E-value=59 Score=35.44 Aligned_cols=96 Identities=13% Similarity=0.146 Sum_probs=52.3
Q ss_pred CcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCC--------ceeceeEEccCCeEEEEcCCC
Q 009420 266 AAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQP--------RVMGDMTLLPNGNVLLINGAG 336 (535)
Q Consensus 266 ~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~--------R~~~~~v~lpdG~I~vvGG~~ 336 (535)
+++||++... ..+.++|..+....|+.. ..... ....+ +++-+++||+... +
T Consensus 70 ~g~vyv~~~~-----------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~v~v~~~-d 130 (689)
T 1yiq_A 70 DGVMYTTGPF-----------------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRG-VAVWKGKVYVGVL-D 130 (689)
T ss_dssp TTEEEEECGG-----------------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCC-CEEETTEEEEECT-T
T ss_pred CCEEEEEcCC-----------------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCc-cEEECCEEEEEcc-C
Confidence 8899887531 235677877656679875 32211 01122 2345888887432 2
Q ss_pred CCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCc-ccccceeecCCCcEEEecC
Q 009420 337 KGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPR-MYHSTAVLLRDGRVLVGGS 394 (535)
Q Consensus 337 ~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R-~yhs~a~LlpDG~V~v~GG 394 (535)
+ .+.++|.++.+ ..|+.-......+ ..+..+.++.+|+||+..+
T Consensus 131 -g------------~l~AlDa~TG~-~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~ 175 (689)
T 1yiq_A 131 -G------------RLEAIDAKTGQ-RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNG 175 (689)
T ss_dssp -S------------EEEEEETTTCC-EEEEEECCSCTTSCCBCCSCCEEETTEEEECCB
T ss_pred -C------------EEEEEECCCCC-EeeeecCcCCCCCCccccCCcEEECCEEEEEeC
Confidence 1 46889988762 2587643211111 1222333445999988654
No 245
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=40.66 E-value=45 Score=33.65 Aligned_cols=19 Identities=16% Similarity=0.190 Sum_probs=15.5
Q ss_pred ccceEEEecCCcEEEEcCc
Q 009420 149 WYATDHILPDGRIIIIGGR 167 (535)
Q Consensus 149 ~y~s~~~L~dG~vyvvGG~ 167 (535)
.+|+++...||+||..|-.
T Consensus 355 ~~hs~alt~~G~v~~wG~n 373 (423)
T 3mvd_K 355 EVCSYAVTIDGKLYSWGSG 373 (423)
T ss_dssp TTEEEEEETTSCEEEEECC
T ss_pred CCeEEEEcCCCCEEEECCC
Confidence 4678888889999999843
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=38.91 E-value=1.2e+02 Score=28.54 Aligned_cols=81 Identities=11% Similarity=-0.030 Sum_probs=43.4
Q ss_pred eeEEEECCC-CCEEECcccc-ccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEe
Q 009420 79 HSVEYSVLT-NEFRPLFVQS-NVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHIL 156 (535)
Q Consensus 79 ~~~~yDp~t-~~w~~~~~~~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L 156 (535)
.+.+||+.. ++........ .....+.++-.+|+|||.-.. ...+.+|||. .+...+.....+-..++.+.+
T Consensus 190 ~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~---~~~V~~~~~~----G~~~~~~~~~~~~~~p~~~a~ 262 (306)
T 2p4o_A 190 LLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHI---YNSVVRIAPD----RSTTIIAQAEQGVIGSTAVAF 262 (306)
T ss_dssp EEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBT---TCCEEEECTT----CCEEEEECGGGTCTTEEEEEE
T ss_pred EEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCC---CCeEEEECCC----CCEEEEeecccccCCceEEEE
Confidence 567888764 3321111110 112344556679999998532 3579999986 333333222333234566666
Q ss_pred ----cC-CcEEEEcC
Q 009420 157 ----PD-GRIIIIGG 166 (535)
Q Consensus 157 ----~d-G~vyvvGG 166 (535)
+| +.+||...
T Consensus 263 ~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 263 GQTEGDCTAIYVVTN 277 (306)
T ss_dssp CCSTTTTTEEEEEEC
T ss_pred ecccCCCCEEEEECC
Confidence 35 57887754
No 247
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=38.42 E-value=1.8e+02 Score=29.45 Aligned_cols=59 Identities=22% Similarity=0.189 Sum_probs=34.5
Q ss_pred ccccceecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCCc-eecCCCCcccccceEEEecCCc-EEEE
Q 009420 100 WCSSGAVRP-DGVLIQTGGFNDGEKKIRSFVPCNDESCDW-KEIDGLGARRWYATDHILPDGR-IIII 164 (535)
Q Consensus 100 ~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W-~~~~~m~~~R~y~s~~~L~dG~-vyvv 164 (535)
.+.+.++-+ +|+||+.--. ...+++||+. +.+- +.+.......|....+.-++|+ +|+.
T Consensus 229 ~P~giavd~~~G~lyv~d~~---~~~V~~~d~~---~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYH---HAMISSYDPA---TGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp SBCCCEECTTTCCEEECBTT---CSEEEEECTT---TCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred CCCEEEEeCCCCeEEEEECC---CCEEEEEECC---CCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 455666667 8999987432 3579999997 4544 2222111122223466666776 7776
No 248
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=38.30 E-value=4.1e+02 Score=29.62 Aligned_cols=144 Identities=8% Similarity=-0.061 Sum_probs=70.4
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceec---------CCCC-ccc
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEI---------DGLG-ARR 148 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~---------~~m~-~~R 148 (535)
.+.+||..+++-...-. ......+.++-++|+.+++|+.+ ..+++||.. +.+-... ..+. ..-
T Consensus 80 ~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~d---g~V~lwd~~---~~~~~~~~i~~~~~~~~~~~~h~~ 152 (902)
T 2oaj_A 80 TVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQN---GSMIVYDID---RDQLSSFKLDNLQKSSFFPAARLS 152 (902)
T ss_dssp EEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETT---SCEEEEETT---TTEEEEEEECCHHHHHTCSSSCCC
T ss_pred eEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCC---CcEEEEECC---CCccccceeccccccccccccCCC
Confidence 57889988876432111 11112233455799999998763 578999987 4432110 1110 001
Q ss_pred ccceEEEecC-CcEEEEcCccCCeeEEEeCCCCCCee-eeccc-c-ccCCc------ccc-CCCcceEEEeeCCcEEEEe
Q 009420 149 WYATDHILPD-GRIIIIGGRRQFNYEFYPKNGAPNVY-SLPFL-V-QTNDP------RVE-NNLYPFVFLNVDGFLFIFA 217 (535)
Q Consensus 149 ~y~s~~~L~d-G~vyvvGG~~~~~~E~yP~~~~~~w~-~~~~l-~-~~~~~------~~~-~~~yp~~~~~~dG~ifv~g 217 (535)
.-.+++.-++ +.++++|+.++ .+ +|..... +.. .+..- . ..... ... ...--.+...|||+.++.|
T Consensus 153 ~V~sl~~sp~~~~~l~~g~~dg-~v-lWd~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg 229 (902)
T 2oaj_A 153 PIVSIQWNPRDIGTVLISYEYV-TL-TYSLVEN-EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI 229 (902)
T ss_dssp CCCEEEEETTEEEEEEEECSSC-EE-EEETTTT-EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE
T ss_pred CeEEEEEccCCCCEEEEEeCCC-cE-EEECCCC-ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE
Confidence 1223444443 46777776653 56 7732211 111 11100 0 00000 000 0000122345799998888
Q ss_pred c--CeEEEEECCCCeEE
Q 009420 218 N--NRAILFDYVNNKVV 232 (535)
Q Consensus 218 g--~~~~~yDp~t~~W~ 232 (535)
+ ..+.+||.++++-.
T Consensus 230 s~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 230 HEDNSLVFWDANSGHMI 246 (902)
T ss_dssp ETTCCEEEEETTTCCEE
T ss_pred ECCCeEEEEECCCCcEE
Confidence 6 46889999887654
No 249
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=38.28 E-value=56 Score=32.10 Aligned_cols=74 Identities=14% Similarity=0.001 Sum_probs=43.3
Q ss_pred ceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCC-CcccccceEEEe
Q 009420 78 AHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGL-GARRWYATDHIL 156 (535)
Q Consensus 78 ~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m-~~~R~y~s~~~L 156 (535)
..+.+||.+|++-...-.... ..+.++.+||+.+.+.+. +++.+||.. +.+-+.+..+ ..++.-...+.-
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~----~~v~v~D~~---t~~l~~~~~i~~~G~~P~~~~~~ 356 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG----GNVNVYDIS---QPEPKLLRTIEGAAEASLQVQFH 356 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS----SCEEEEECS---SSSCEEEEEETTSCSSEEEEEEC
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC----CeEEEEECC---CCcceeeEEeccCCCCcEEEEec
Confidence 468899999987543211222 556667789886655542 679999987 4422555443 334432344555
Q ss_pred cCCc
Q 009420 157 PDGR 160 (535)
Q Consensus 157 ~dG~ 160 (535)
+||+
T Consensus 357 p~G~ 360 (361)
T 2oiz_A 357 PVGG 360 (361)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 5553
No 250
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=37.73 E-value=96 Score=31.12 Aligned_cols=73 Identities=16% Similarity=0.105 Sum_probs=37.8
Q ss_pred eceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecCCCC
Q 009420 318 MGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGSNPH 397 (535)
Q Consensus 318 ~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG~~~ 397 (535)
.|.+++.-||+||..|-...|.-|.....+....+..-..-.+ +...++ .-.+|+++ |..||+||.-|.+..
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~---~v~~ia----~G~~hs~a-lt~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE---KIVSVG----CGEVCSYA-VTIDGKLYSWGSGVN 375 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCS---CEEEEE----EETTEEEE-EETTSCEEEEECCTT
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCC---CEEEEE----cCCCeEEE-EcCCCCEEEECCCCC
Confidence 4555667799999998654333222211111111111111111 233222 23467655 568999999998765
Q ss_pred c
Q 009420 398 A 398 (535)
Q Consensus 398 ~ 398 (535)
+
T Consensus 376 G 376 (423)
T 3mvd_K 376 N 376 (423)
T ss_dssp S
T ss_pred C
Confidence 4
No 251
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=37.12 E-value=92 Score=29.97 Aligned_cols=85 Identities=13% Similarity=0.022 Sum_probs=43.0
Q ss_pred eeEEEECCCCCEEECccccc--c--c-cccceecCCCcEEEEcCC-----C-CCCCeEEEEcCCCCCCCCceecCCCCc-
Q 009420 79 HSVEYSVLTNEFRPLFVQSN--V--W-CSSGAVRPDGVLIQTGGF-----N-DGEKKIRSFVPCNDESCDWKEIDGLGA- 146 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~--~--~-c~~~~~l~dG~l~v~GG~-----~-~g~~~v~~ydp~~~~~~~W~~~~~m~~- 146 (535)
.+.+||+.+++.+.+..... . . -.+..+.+||+.+++.-. . .+...+.++|.. +.+-+.+..-..
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~---~~~~~~l~~~~~~ 341 (388)
T 3pe7_A 265 FIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK---NGTQHRVARHDTS 341 (388)
T ss_dssp EEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT---TTEEEEEEECCCC
T ss_pred eEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc---CCceEEeccccCc
Confidence 47899999998776643221 0 0 112245677775554211 1 234678899987 554444331111
Q ss_pred ------cc--ccceEEEecCCcEEEEcC
Q 009420 147 ------RR--WYATDHILPDGRIIIIGG 166 (535)
Q Consensus 147 ------~R--~y~s~~~L~dG~vyvvGG 166 (535)
.| .....+.-+||+.+++..
T Consensus 342 ~~~~~~~~~~~~~~~~~spDg~~l~~~s 369 (388)
T 3pe7_A 342 WKVFEGDRQVTHPHPSFTPDDKQILFTS 369 (388)
T ss_dssp CCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred ccccccccccCCCCccCCCCCCEEEEEe
Confidence 00 123345567887555543
No 252
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=37.01 E-value=1.9e+02 Score=32.73 Aligned_cols=82 Identities=12% Similarity=-0.042 Sum_probs=53.0
Q ss_pred eeE-EEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEec
Q 009420 79 HSV-EYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILP 157 (535)
Q Consensus 79 ~~~-~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~ 157 (535)
.+. +||..+++.+.+. .+.......++-+||+.++++... ..+.++|.. +.+-..+..- ........+.-+
T Consensus 359 ~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~---~~v~~~d~~---tg~~~~~~~~-~~~~v~~~~~Sp 430 (1045)
T 1k32_A 359 DFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDR---FEIMTVDLE---TGKPTVIERS-REAMITDFTISD 430 (1045)
T ss_dssp EEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETT---SEEEEEETT---TCCEEEEEEC-SSSCCCCEEECT
T ss_pred ceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCC---CeEEEEECC---CCceEEeccC-CCCCccceEECC
Confidence 455 7899988887776 333334445577899999887653 579999997 5554443211 112234556667
Q ss_pred CCcEEEEcCcc
Q 009420 158 DGRIIIIGGRR 168 (535)
Q Consensus 158 dG~vyvvGG~~ 168 (535)
||+.++.++.+
T Consensus 431 DG~~la~~~~~ 441 (1045)
T 1k32_A 431 NSRFIAYGFPL 441 (1045)
T ss_dssp TSCEEEEEEEE
T ss_pred CCCeEEEEecC
Confidence 99988777653
No 253
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=36.46 E-value=82 Score=33.41 Aligned_cols=96 Identities=13% Similarity=0.189 Sum_probs=51.7
Q ss_pred CcEEEEEcCCCCCcccccccccccccCCceEEEEe-cCCCCCeeee-cCCCC-c-------eeceeEEccCCeEEEEcCC
Q 009420 266 AAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKI-TDPTPTWVLE-TMPQP-R-------VMGDMTLLPNGNVLLINGA 335 (535)
Q Consensus 266 ~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~-~~~~~~W~~~-~m~~~-R-------~~~~~v~lpdG~I~vvGG~ 335 (535)
+++||+....+ ..+.++|+ .+....|+.. ..... + ...+ .++-+++||+...
T Consensus 62 ~g~vyv~~~~~----------------~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~- 123 (571)
T 2ad6_A 62 GDMMYVHSAFP----------------NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRG-LAYGAGQIVKKQA- 123 (571)
T ss_dssp TTEEEEECSTT----------------TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCC-CEEETTEEEEECT-
T ss_pred CCEEEEEeCCC----------------CEEEEEeCCCCccEEEEEcCCCCccccccccccccccc-cEEECCEEEEEeC-
Confidence 88999876521 23567887 6655679875 32211 0 1112 3345889988543
Q ss_pred CCCCCCcccCCCCccccEEEeCCCCCCCceeecCCC-CCCcccccceeecCCCcEEEecC
Q 009420 336 GKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPS-TIPRMYHSTAVLLRDGRVLVGGS 394 (535)
Q Consensus 336 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~-~~~R~yhs~a~LlpDG~V~v~GG 394 (535)
+ + .+.++|+++.+ ..|+.-... ....... .+.++.+|+||+..+
T Consensus 124 d-g------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~-~~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 124 N-G------------HLLALDAKTGK-INWEVEVCDPKVGSTLT-QAPFVAKDTVLMGCS 168 (571)
T ss_dssp T-S------------EEEEEETTTCC-EEEEEECCCGGGTCBCC-SCCEEETTEEEEECB
T ss_pred C-C------------EEEEEECCCCC-EEEEecCCCCCccceec-cCCEEECCEEEEEec
Confidence 1 1 46788988762 258743221 1111111 222335889988765
No 254
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=36.19 E-value=3.2e+02 Score=29.67 Aligned_cols=39 Identities=10% Similarity=-0.043 Sum_probs=25.5
Q ss_pred EeCCCCCCCceeecCCCCCC--cccccceeecCCCcEEEec
Q 009420 355 YRPDNIPGSRFDLQNPSTIP--RMYHSTAVLLRDGRVLVGG 393 (535)
Q Consensus 355 YDP~t~~g~~Wt~~~~~~~~--R~yhs~a~LlpDG~V~v~G 393 (535)
++-.++.|.+|+.......+ ....+..+.++||+|+++=
T Consensus 617 ~~~S~D~G~TW~~~~~i~~~~~~~~Ys~l~~~~DG~i~ily 657 (686)
T 2jkb_A 617 LVNKEDDSIDWKYHYDIDLPSYGYAYSAITELPNHHIGVLF 657 (686)
T ss_dssp EECTTTCCEEEEEEEESSCTTSBCCSEEEEECTTSCEEEEE
T ss_pred EEeccCCCCcccCCeeecCCCCCccccEEEEeCcCEEEEEE
Confidence 46667778899976444332 2334566667999988775
No 255
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=35.98 E-value=83 Score=32.35 Aligned_cols=18 Identities=11% Similarity=-0.073 Sum_probs=14.9
Q ss_pred ccceEEEecCCcEEEEcC
Q 009420 149 WYATDHILPDGRIIIIGG 166 (535)
Q Consensus 149 ~y~s~~~L~dG~vyvvGG 166 (535)
.+|+++...||+||..|-
T Consensus 386 ~~hs~al~~~G~vy~wG~ 403 (473)
T 3of7_A 386 SHHSVAVAQNGIAYSWGF 403 (473)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCcEEEeeC
Confidence 367888888999999984
No 256
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=35.40 E-value=69 Score=34.80 Aligned_cols=97 Identities=12% Similarity=0.127 Sum_probs=52.4
Q ss_pred CcEEEEEcCCCCCcccccccccccccCCceEEEEecCCCCCeeee-cCCCC--------ceeceeEEccCCeEEEEcCCC
Q 009420 266 AAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKITDPTPTWVLE-TMPQP--------RVMGDMTLLPNGNVLLINGAG 336 (535)
Q Consensus 266 ~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~~~~~~~W~~~-~m~~~--------R~~~~~v~lpdG~I~vvGG~~ 336 (535)
+++||++... ..+.++|..+....|+.. ..... ....+ +++-+++||+... +
T Consensus 77 ~g~vyv~~~~-----------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~a~~~~~v~v~~~-d 137 (677)
T 1kb0_A 77 DGIMYVSASW-----------------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRG-VALWKGKVYVGAW-D 137 (677)
T ss_dssp TTEEEEECGG-----------------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCC-CEEETTEEEEECT-T
T ss_pred CCEEEEECCC-----------------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCC-ceEECCEEEEEcC-C
Confidence 8899887541 245677776655678875 32211 11122 3345888888532 1
Q ss_pred CCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcc-cccceeecCCCcEEEecCC
Q 009420 337 KGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRM-YHSTAVLLRDGRVLVGGSN 395 (535)
Q Consensus 337 ~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~-yhs~a~LlpDG~V~v~GG~ 395 (535)
+ .+.++|.++.+ ..|+.-......+. ....+.++.+++||+..+.
T Consensus 138 -g------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~ 183 (677)
T 1kb0_A 138 -G------------RLIALDAATGK-EVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGG 183 (677)
T ss_dssp -S------------EEEEEETTTCC-EEEEEETTTTCCSSCBCCSCCEEETTEEEECCBC
T ss_pred -C------------EEEEEECCCCC-EEeeecCCcCcCcCcccccCcEEECCEEEEEecc
Confidence 1 46788988762 25875332011111 1122334458888887653
No 257
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=34.65 E-value=3.4e+02 Score=26.69 Aligned_cols=88 Identities=13% Similarity=0.080 Sum_probs=50.2
Q ss_pred ceeEEEECC---CCC--EE-ECcccc---------c-cccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceec
Q 009420 78 AHSVEYSVL---TNE--FR-PLFVQS---------N-VWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEI 141 (535)
Q Consensus 78 ~~~~~yDp~---t~~--w~-~~~~~~---------~-~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~ 141 (535)
..+..||+. |++ |. .+.... . ..|...++-.+|.+||++-.. ...|.++||.......|-.-
T Consensus 100 ~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~--~~~I~rV~pdG~~~~~~~~~ 177 (334)
T 2p9w_A 100 SSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG--MPAIARVSADGKTVSTFAWE 177 (334)
T ss_dssp CEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES--SCEEEEECTTSCCEEEEEEC
T ss_pred CEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC--CCeEEEEeCCCCEEeeeeec
Confidence 568899988 654 43 232111 1 236677788899999986542 15688999972101124322
Q ss_pred CCCCccc-ccceEEEecCCcEEEEcCc
Q 009420 142 DGLGARR-WYATDHILPDGRIIIIGGR 167 (535)
Q Consensus 142 ~~m~~~R-~y~s~~~L~dG~vyvvGG~ 167 (535)
.+-...| .+.+.+..+||+++++-..
T Consensus 178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 178 SGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp CCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred CCCcccccCcceEEEeCCCCEEEEEcC
Confidence 2112223 3456677778877776443
No 258
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=33.39 E-value=1.4e+02 Score=31.44 Aligned_cols=124 Identities=8% Similarity=-0.023 Sum_probs=63.4
Q ss_pred CCEEECcccccccccc-ceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecC---CCCcccccceEEEe-------
Q 009420 88 NEFRPLFVQSNVWCSS-GAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEID---GLGARRWYATDHIL------- 156 (535)
Q Consensus 88 ~~w~~~~~~~~~~c~~-~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~---~m~~~R~y~s~~~L------- 156 (535)
.+|+.........|.. .+.+.||+|+++.-.........+|-.. ++..+|++.. .|+.+....+...+
T Consensus 200 ~TW~~~~~~~~~~~~~~v~~~~dG~l~~~~r~~~~~~~~~~~~S~-DgG~tW~~~~~~~~l~~p~~~~s~~~~~~~~~~~ 278 (601)
T 1w8o_A 200 RTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKVAVST-DGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAG 278 (601)
T ss_dssp SSCEECCCBCSSCCSEEEEECTTSCEEEEECCTTCCSEEEEEEES-STTSCCCCCEEEEEEECSSCCCEEEESSTTCCTT
T ss_pred cCccCCCCCCCCCCcCEEEEeCCCEEEEEEeCCCCCCCEEEEEEc-CCCCCCCCCeecCcCCCCCccceEEEecccccCC
Confidence 4688775433222222 3345799999965432111223333322 1246898763 35555544444433
Q ss_pred -cCCcEEEEcCccC----CeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec
Q 009420 157 -PDGRIIIIGGRRQ----FNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN 218 (535)
Q Consensus 157 -~dG~vyvvGG~~~----~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg 218 (535)
.++.+++++.... ....++ ...++..|.....+.. ....||.+..++||+|+++.-
T Consensus 279 ~~~~~~l~~~~~~~~~~R~~~~l~~S~D~G~tW~~~~~l~~------~~~~Y~~l~~~~dg~i~~~ye 340 (601)
T 1w8o_A 279 SARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQP------GSMSYSTLTALPDGTYGLLYE 340 (601)
T ss_dssp CSGGGCEEEEEECCSSSSEEEEEEEESSTTSCCCEEEEEEE------EECCCEEEEECTTSCEEEEEC
T ss_pred CCCCCEEEEECCCCCCcccceEEEEeCCCCCCCCCceEeCC------CCCCCCeEEEcCCCeEEEEEe
Confidence 1345555543221 123344 3333557764332321 123488889999999988753
No 259
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=32.40 E-value=4.7e+02 Score=27.53 Aligned_cols=109 Identities=11% Similarity=-0.019 Sum_probs=62.4
Q ss_pred EEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcccc--ccccccceecCCCcEEEEcCCCC
Q 009420 43 MQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQS--NVWCSSGAVRPDGVLIQTGGFND 120 (535)
Q Consensus 43 ~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~--~~~c~~~~~l~dG~l~v~GG~~~ 120 (535)
.+.-+||+.++++..+..... ......+.+||..+++.+++.... .......++-+||+.++++..
T Consensus 66 ~~~SpDg~~l~~~~~~~~~~~----------~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-- 133 (723)
T 1xfd_A 66 YEISPDREYALFSYNVEPIYQ----------HSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-- 133 (723)
T ss_dssp EEECTTSSEEEEEESCCCCSS----------SCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--
T ss_pred EEECCCCCEEEEEecCcccee----------ecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC--
Confidence 334478887777754311100 001246889999999877775322 222334456789988888754
Q ss_pred CCCeEEEEcCCCCCCCCceecCCCCcc--------c---------ccceEEEecCCcEEEEcCcc
Q 009420 121 GEKKIRSFVPCNDESCDWKEIDGLGAR--------R---------WYATDHILPDGRIIIIGGRR 168 (535)
Q Consensus 121 g~~~v~~ydp~~~~~~~W~~~~~m~~~--------R---------~y~s~~~L~dG~vyvvGG~~ 168 (535)
..+.++|.. +.+...+..-... . ...+.+.-+||+.++++..+
T Consensus 134 --~~i~~~~~~---~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 134 --NNIYYCAHV---GKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp --TEEEEESSS---SSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred --CeEEEEECC---CCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 478888887 4444433211100 0 11355666899888776543
No 260
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=32.19 E-value=4.9e+02 Score=27.68 Aligned_cols=84 Identities=15% Similarity=0.053 Sum_probs=46.6
Q ss_pred eEEEECCCCCEEECccc------cccccccceecCCCcEEEEcCCCCCCC--eEEEEcCCCCCCCCceecCCCCcccccc
Q 009420 80 SVEYSVLTNEFRPLFVQ------SNVWCSSGAVRPDGVLIQTGGFNDGEK--KIRSFVPCNDESCDWKEIDGLGARRWYA 151 (535)
Q Consensus 80 ~~~yDp~t~~w~~~~~~------~~~~c~~~~~l~dG~l~v~GG~~~g~~--~v~~ydp~~~~~~~W~~~~~m~~~R~y~ 151 (535)
..+.|...++++.+-.. ......+.++.+||+.++++....|.. .++++|.. +.+..... +...+ ..
T Consensus 100 l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~---tg~~~~~~-~~~~~-~~ 174 (710)
T 2xdw_A 100 LYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD---GAKELPDV-LERVK-FS 174 (710)
T ss_dssp EEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT---TTEEEEEE-EEEEC-SC
T ss_pred EEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC---CCCCCccc-ccCcc-cc
Confidence 34555556666644211 111223445678999888865433333 79999988 66665431 11112 23
Q ss_pred eEEEecCCcEEEEcCcc
Q 009420 152 TDHILPDGRIIIIGGRR 168 (535)
Q Consensus 152 s~~~L~dG~vyvvGG~~ 168 (535)
+.+..+||+-++.+..+
T Consensus 175 ~~~wspDg~~l~~~~~~ 191 (710)
T 2xdw_A 175 CMAWTHDGKGMFYNAYP 191 (710)
T ss_dssp CEEECTTSSEEEEEECC
T ss_pred eEEEEeCCCEEEEEEEC
Confidence 45666798866665443
No 261
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=30.49 E-value=37 Score=33.60 Aligned_cols=53 Identities=9% Similarity=-0.111 Sum_probs=25.5
Q ss_pred eeEEEECCCCC--EEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCce
Q 009420 79 HSVEYSVLTNE--FRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWK 139 (535)
Q Consensus 79 ~~~~yDp~t~~--w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~ 139 (535)
.+.+||.+|++ |+.-. .... +..++.+|++|+.++.+ ..+..+|..+ ++..|.
T Consensus 20 ~v~a~d~~tG~~~W~~~~--~~~~--s~p~~~~g~~~v~~s~d---g~l~a~d~~t-G~~~w~ 74 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE--DPVL--QVPTHVEEPAFLPDPND---GSLYTLGSKN-NEGLTK 74 (369)
T ss_dssp EEEEEETTTCCEEEEEEC--CCSC--CCC-----CCEEECTTT---CCEEEC------CCSEE
T ss_pred EEEEEECCCCCEEEEecC--CCce--ecceEcCCCEEEEeCCC---CEEEEEECCC-Cceeee
Confidence 46788988876 55322 1112 22345688888887542 4688999862 133564
No 262
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=30.12 E-value=5.5e+02 Score=27.66 Aligned_cols=102 Identities=13% Similarity=0.012 Sum_probs=51.0
Q ss_pred CCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecC--CCCcccccceEEEec-CCcEEEEcCccCCeeEEE-eCCCCCCe
Q 009420 108 PDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEID--GLGARRWYATDHILP-DGRIIIIGGRRQFNYEFY-PKNGAPNV 183 (535)
Q Consensus 108 ~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~--~m~~~R~y~s~~~L~-dG~vyvvGG~~~~~~E~y-P~~~~~~w 183 (535)
.+|+||++-. +...|+++|+. ...-+.+. .+..+| ..++-+ +|+||+.--.....++++ +... ..
T Consensus 463 ~~g~LY~tD~---~~~~I~v~d~d---g~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~~~~~I~~~~~dG~--~~ 531 (699)
T 1n7d_A 463 IHSNIYWTDS---VLGTVSVADTK---GVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--DI 531 (699)
T ss_dssp SSSBCEECCT---TTSCEEEEBSS---SCCEEEECCCSSCCCC---CEECCSSSSCCEECCCSSSCCEEBCCSSSC--CC
T ss_pred eCCcEEEEec---cCCeEEEEecC---CCceEEEEeCCCCCcc---eEEEccCCCcEEEcccCCCCeEEEEeCCCC--Ce
Confidence 3678888732 23678999987 43333322 344444 233322 578888642222334444 2211 10
Q ss_pred eeeccccccCCccccCCCcceEEEe-e-CCcEEEEe--cCeEEEEECCCC
Q 009420 184 YSLPFLVQTNDPRVENNLYPFVFLN-V-DGFLFIFA--NNRAILFDYVNN 229 (535)
Q Consensus 184 ~~~~~l~~~~~~~~~~~~yp~~~~~-~-dG~ifv~g--g~~~~~yDp~t~ 229 (535)
..+ + .. .-.+|...++ + +++||+.- .+.++++|+...
T Consensus 532 ~~l--~-~~------~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 532 YSL--V-TE------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CEE--S-CS------SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred eEE--E-eC------CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 010 0 00 0123544443 3 57899874 356888998753
No 263
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=30.00 E-value=4.1e+02 Score=26.09 Aligned_cols=119 Identities=12% Similarity=0.001 Sum_probs=61.1
Q ss_pred ceEEcccCCCcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcccccccc------
Q 009420 28 GWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWC------ 101 (535)
Q Consensus 28 ~W~~l~~~~~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c------ 101 (535)
+.+.+.. --..+.+++.+++|++||..... | .+.++++.+++.+.+......+.
T Consensus 23 ~~~~va~-gL~~P~~ia~~pdG~llVter~~----------G---------~I~~v~~~~g~~~~v~~~~~v~~~g~~Gl 82 (347)
T 3das_A 23 VLRTVAT-GLNSPWGLAPLPGGDLLVSSRDE----------A---------TITRVDAKTGRKTELGEVPGVSPSGEGGL 82 (347)
T ss_dssp EEEEEEC-CCSSEEEEEECTTSCEEEEETTT----------C---------EEEEECTTTCCEEEEEECTTCCCBTTBSE
T ss_pred eeEEeec-CCCCceEEEEcCCCcEEEEEecC----------C---------EEEEEECCCCcEeeecccCceeecCCCCc
Confidence 3444543 12346678888999999988521 2 35667776666655432221111
Q ss_pred ccceecC----CCcEEEEcCCCCCCCeEEEEcCCCCC--CCCcee---c-CCCCc--ccccceEEEecCCcEEEEcCc
Q 009420 102 SSGAVRP----DGVLIQTGGFNDGEKKIRSFVPCNDE--SCDWKE---I-DGLGA--RRWYATDHILPDGRIIIIGGR 167 (535)
Q Consensus 102 ~~~~~l~----dG~l~v~GG~~~g~~~v~~ydp~~~~--~~~W~~---~-~~m~~--~R~y~s~~~L~dG~vyvvGG~ 167 (535)
.+.++-+ ||.||+.=-. .....+.+|...... ..+..+ + ..++. .++....+.-+||++||.=|.
T Consensus 83 lGia~~Pdf~~~g~lYv~yt~-~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 83 LGIALSPDYASDHMVYAYFTS-ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EEEEECTTHHHHCEEEEEEEC-SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred eeeEeccccccCCEEEEEEec-CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 1223333 5889985100 012457777654200 012211 1 11221 233345667779999998664
No 264
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=29.78 E-value=54 Score=31.31 Aligned_cols=95 Identities=25% Similarity=0.392 Sum_probs=47.6
Q ss_pred eEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCC
Q 009420 41 MHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFND 120 (535)
Q Consensus 41 ~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~ 120 (535)
.|++++.+|+||.||-.+.+ ++.+|. +...+...+..- ..+..++ -||+||..|-...
T Consensus 34 ~h~~~l~~G~v~~wG~n~~G--qlg~p~----------------~~~~~i~~ia~G---~~hs~~l-~~G~v~~wG~n~~ 91 (282)
T 3qhy_B 34 FHGLALKGGKVLGWGANLNG--QLTMPA----------------ATQSGVDAIAAG---NYHSLAL-KDGEVIAWGGNED 91 (282)
T ss_dssp SEEEEEETTEEEEEECCSSS--TTSCCG----------------GGGSCCCEEEEC---SSEEEEE-ETTEEEEEECCTT
T ss_pred CeEEEEECCEEEEEeCCCCC--CCCCCc----------------cCCCCEEEEEeC---CCEEEEE-ECCEEEEeeCCCC
Confidence 47777779999999964422 222110 001112222111 1122223 4999999986543
Q ss_pred CCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCc
Q 009420 121 GEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGR 167 (535)
Q Consensus 121 g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~ 167 (535)
+.-. -|. . ....+...... .+|+++.. ||+||..|-.
T Consensus 92 Gqlg----~P~---~-~~~~v~~ia~G-~~hs~al~-~G~v~~wG~n 128 (282)
T 3qhy_B 92 GQTT----VPA---E-ARSGVDAIAAG-AWASYALK-DGKVIAWGDD 128 (282)
T ss_dssp STTC----CCG---G-GSSSEEEEEEE-TTEEEEEE-TTEEEEEECC
T ss_pred CCCC----CCc---c-cCCCeEEEECc-CCEEEEEe-CCeEEEecCC
Confidence 2111 022 0 00111122223 36788888 9999999853
No 265
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=28.84 E-value=66 Score=30.68 Aligned_cols=51 Identities=20% Similarity=0.321 Sum_probs=28.7
Q ss_pred CCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEecCCcEEEEcCcc
Q 009420 108 PDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILPDGRIIIIGGRR 168 (535)
Q Consensus 108 ~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~ 168 (535)
.||+||..|-...+.-. -|. .....+..+... .+|+++.. ||+||..|-..
T Consensus 196 ~~G~v~~wG~n~~gqlg----~p~----~~~~~v~~i~~G-~~h~~al~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 196 KDGKVIAWGDNRYKQTT----VPT----EALSGVSAIASG-EWYSLALK-NGKVIAWGSSR 246 (282)
T ss_dssp ETTEEEEEECCTTSTTC----CCG----GGGSSCCEEEEC-SSCEEEEE-TTEEEEESTTC
T ss_pred ECCeEEEEECCCCCCCC----CCc----ccCCCceEEEcC-CCEEEEEE-CCEEEEecCCC
Confidence 69999999865432111 111 111222223233 36787877 99999998643
No 266
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=28.80 E-value=4.3e+02 Score=26.04 Aligned_cols=102 Identities=15% Similarity=0.080 Sum_probs=54.6
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCCceec--CCCCcccccceEEEec-CCcEEEEcCccCCeeEEEeCCCCCCeee
Q 009420 109 DGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEI--DGLGARRWYATDHILP-DGRIIIIGGRRQFNYEFYPKNGAPNVYS 185 (535)
Q Consensus 109 dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~--~~m~~~R~y~s~~~L~-dG~vyvvGG~~~~~~E~yP~~~~~~w~~ 185 (535)
+++||++-.. ...++++|+. ...-+.+ ..+..+| +.++-+ +|+||+.--.....++.+.... ..-..
T Consensus 170 ~~~lY~~d~~---~~~I~~~~~~---g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~~~~~I~~~~~dG-~~~~~ 239 (400)
T 3p5b_L 170 HSNIYWTDSV---LGTVSVADTK---GVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYS 239 (400)
T ss_dssp TTEEEEEETT---TTEEEEECTT---TCSEEEEEECSSCCEE---EEEEETTTTEEEEEECSSSCCEEEEETTS-CSCEE
T ss_pred CCceEEEECC---CCeEEEEeCC---CCceEEEEeCCCCCcc---eEEEecccCeEEEEeCCCCCEEEEEeCCC-CccEE
Confidence 7889998533 3689999987 4333322 2455555 334432 6889987522223455552211 01111
Q ss_pred eccccccCCccccCCCcceEEEee--CCcEEEEe--cCeEEEEECCCC
Q 009420 186 LPFLVQTNDPRVENNLYPFVFLNV--DGFLFIFA--NNRAILFDYVNN 229 (535)
Q Consensus 186 ~~~l~~~~~~~~~~~~yp~~~~~~--dG~ifv~g--g~~~~~yDp~t~ 229 (535)
+ +.. .-.+|...++- +++||+.- .+.++.+|....
T Consensus 240 ~--~~~-------~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 240 L--VTE-------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp E--ECS-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred E--EEC-------CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 1 000 01246555543 67899874 457889998754
No 267
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=27.86 E-value=2.6e+02 Score=28.47 Aligned_cols=120 Identities=14% Similarity=0.194 Sum_probs=60.8
Q ss_pred ceEEcccCCCcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECcccccccc------
Q 009420 28 GWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQSNVWC------ 101 (535)
Q Consensus 28 ~W~~l~~~~~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~~~~~c------ 101 (535)
+.+.+... -..+..++.+++|+|||..... | .+.++++.+++.+.+......+.
T Consensus 18 ~~~~~a~~-l~~P~~~a~~pdG~l~V~e~~g----------g---------~I~~~~~~~g~~~~~~~~~~~~~~~~g~~ 77 (454)
T 1cru_A 18 DKKVILSN-LNKPHALLWGPDNQIWLTERAT----------G---------KILRVNPESGSVKTVFQVPEIVNDADGQN 77 (454)
T ss_dssp CEEEEECC-CSSEEEEEECTTSCEEEEETTT----------C---------EEEEECTTTCCEEEEEECTTCCCCTTSSC
T ss_pred EEEEEECC-CCCceEEEEcCCCcEEEEEcCC----------C---------EEEEEECCCCcEeEEecCCccccccCCCC
Confidence 45555431 2345677778999999987521 1 24566666566554432222221
Q ss_pred --ccceecC----CCcEEEEcCC-----CCC----CCeEEEEcCCCCCCCCc---eec-CCCCcc--cccceEEEecCCc
Q 009420 102 --SSGAVRP----DGVLIQTGGF-----NDG----EKKIRSFVPCNDESCDW---KEI-DGLGAR--RWYATDHILPDGR 160 (535)
Q Consensus 102 --~~~~~l~----dG~l~v~GG~-----~~g----~~~v~~ydp~~~~~~~W---~~~-~~m~~~--R~y~s~~~L~dG~ 160 (535)
.+.++.+ ||.||+.--. .+. ...+.+|+...+ ..+. +.+ ..++.. .+....+.-+||+
T Consensus 78 Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~-~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~ 156 (454)
T 1cru_A 78 GLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKS-TDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK 156 (454)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETT-TTEEEEEEEEEEEECCCSSCCEEEEEECTTSC
T ss_pred ceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCC-CCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe
Confidence 1233334 7999987421 010 235667765410 1122 111 112221 2333455667999
Q ss_pred EEEEcCcc
Q 009420 161 IIIIGGRR 168 (535)
Q Consensus 161 vyvvGG~~ 168 (535)
+||.=|..
T Consensus 157 Lyv~~Gd~ 164 (454)
T 1cru_A 157 IYYTIGDQ 164 (454)
T ss_dssp EEEEECCT
T ss_pred EEEEECCC
Confidence 99986643
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=27.77 E-value=1.6e+02 Score=31.15 Aligned_cols=78 Identities=8% Similarity=0.008 Sum_probs=42.6
Q ss_pred ceeEEEECCCCC--EEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEE
Q 009420 78 AHSVEYSVLTNE--FRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHI 155 (535)
Q Consensus 78 ~~~~~yDp~t~~--w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~ 155 (535)
..+..+|+.|++ |+.-.. .....+..+..+|.||+ |.. + ..+..+|..+ ++..|+.- +...-+...++.
T Consensus 444 g~l~a~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~v~~-g~~-d--g~l~a~D~~t-G~~lw~~~--~~~~~~~~p~~~ 514 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWEK--FAAWGGTLYTKGGLVWY-ATL-D--GYLKALDNKD-GKELWNFK--MPSGGIGSPMTY 514 (571)
T ss_dssp EEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEE-ECT-T--SEEEEEETTT-CCEEEEEE--CSSCCCSCCEEE
T ss_pred CeEEEEECCCCCEEEEecCC--CCccceeEEECCCEEEE-EcC-C--CeEEEEECCC-CCEEEEEe--CCCCcEeeeEEE
Confidence 467899999987 664221 11222333445777777 433 2 5788999872 12346532 222222222222
Q ss_pred ecCCcEEEE
Q 009420 156 LPDGRIIII 164 (535)
Q Consensus 156 L~dG~vyvv 164 (535)
..||++||.
T Consensus 515 ~~~G~~yv~ 523 (571)
T 2ad6_A 515 SFKGKQYIG 523 (571)
T ss_dssp EETTEEEEE
T ss_pred EECCEEEEE
Confidence 258999986
No 269
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=27.68 E-value=5.9e+02 Score=27.26 Aligned_cols=95 Identities=7% Similarity=0.070 Sum_probs=49.7
Q ss_pred EeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCC--EEECcccc-----ccccc---cceecCCCcEEE
Q 009420 45 LLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNE--FRPLFVQS-----NVWCS---SGAVRPDGVLIQ 114 (535)
Q Consensus 45 ~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~--w~~~~~~~-----~~~c~---~~~~l~dG~l~v 114 (535)
++.+|+||+.... ..+..+|.+|++ |+.-.... ...|. .+..+.+++||+
T Consensus 67 ~v~~g~vyv~~~~--------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v 126 (689)
T 1yiq_A 67 IVVDGVMYTTGPF--------------------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYV 126 (689)
T ss_dssp EEETTEEEEECGG--------------------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEE
T ss_pred EEECCEEEEEcCC--------------------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEE
Confidence 3468888876531 136788998886 76533211 12231 223445778777
Q ss_pred EcCCCCCCCeEEEEcCCCCCCCCceecCCCCccc-c-cceEEEecCCcEEEE
Q 009420 115 TGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARR-W-YATDHILPDGRIIII 164 (535)
Q Consensus 115 ~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R-~-y~s~~~L~dG~vyvv 164 (535)
.... ..+..+|..+ ++-.|+.-....... + ..+..++.+|+||+.
T Consensus 127 ~~~d----g~l~AlDa~T-G~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg 173 (689)
T 1yiq_A 127 GVLD----GRLEAIDAKT-GQRAWSVDTRADHKRSYTITGAPRVVNGKVVIG 173 (689)
T ss_dssp ECTT----SEEEEEETTT-CCEEEEEECCSCTTSCCBCCSCCEEETTEEEEC
T ss_pred EccC----CEEEEEECCC-CCEeeeecCcCCCCCCccccCCcEEECCEEEEE
Confidence 5432 4688889872 123487543201111 1 112223347888774
No 270
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=27.54 E-value=31 Score=34.16 Aligned_cols=55 Identities=13% Similarity=0.138 Sum_probs=25.1
Q ss_pred ceEEEEecCCCCCeeeecCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCcee
Q 009420 294 TCARIKITDPTPTWVLETMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFD 366 (535)
Q Consensus 294 s~e~~d~~~~~~~W~~~~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt 366 (535)
.+.++|..+....|+... . ..... .++.+|++|+.+..+ + .+.++|+++.+. .|+
T Consensus 20 ~v~a~d~~tG~~~W~~~~-~--~~~s~-p~~~~g~~~v~~s~d-g------------~l~a~d~~tG~~-~w~ 74 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE-D--PVLQV-PTHVEEPAFLPDPND-G------------SLYTLGSKNNEG-LTK 74 (369)
T ss_dssp EEEEEETTTCCEEEEEEC-C--CSCCC-C-----CCEEECTTT-C------------CEEEC-----CC-SEE
T ss_pred EEEEEECCCCCEEEEecC-C--Cceec-ceEcCCCEEEEeCCC-C------------EEEEEECCCCce-eee
Confidence 355677766556788753 1 11222 234588898886533 2 467889876522 454
No 271
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=26.97 E-value=6.7e+02 Score=27.61 Aligned_cols=103 Identities=14% Similarity=0.064 Sum_probs=56.0
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCCceec--CCCCcccccceEEEec-CCcEEEEcCccCCeeEEEeCCCCCCeee
Q 009420 109 DGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEI--DGLGARRWYATDHILP-DGRIIIIGGRRQFNYEFYPKNGAPNVYS 185 (535)
Q Consensus 109 dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~--~~m~~~R~y~s~~~L~-dG~vyvvGG~~~~~~E~yP~~~~~~w~~ 185 (535)
+++||++-. +...|+++|+. ...-+.+ ..+..+| +.++-+ +|+||+.--.....++++.... ..-..
T Consensus 482 ~~~LY~tD~---~~~~I~v~~ld---G~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g~~~~I~~~~~dG-~~~~~ 551 (791)
T 3m0c_C 482 HSNIYWTDS---VLGTVSVADTK---GVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYS 551 (791)
T ss_dssp TTEEEEEET---TTTEEEEEETT---SSSEEEEEECTTCCEE---EEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEE
T ss_pred CCcEEEEec---CCCeEEEEeCC---CCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCCCCCeEEEEecCC-CceEE
Confidence 568998843 24689999987 3333333 2455555 344433 5899997522223455552221 11111
Q ss_pred eccccccCCccccCCCcceEEEee--CCcEEEEe--cCeEEEEECCCCe
Q 009420 186 LPFLVQTNDPRVENNLYPFVFLNV--DGFLFIFA--NNRAILFDYVNNK 230 (535)
Q Consensus 186 ~~~l~~~~~~~~~~~~yp~~~~~~--dG~ifv~g--g~~~~~yDp~t~~ 230 (535)
++.. .-.+|...++- +++||+.- ...++++|+....
T Consensus 552 --lv~~-------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 552 --LVTE-------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp --EECS-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred --EEeC-------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 1100 01246665543 78999974 3568889887543
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=26.63 E-value=4.1e+02 Score=25.04 Aligned_cols=177 Identities=9% Similarity=-0.056 Sum_probs=0.0
Q ss_pred HHhhcccc---cccCCCceEEcccCCCcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCC---
Q 009420 14 ILCSHRIV---TDAAGGGWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLT--- 87 (535)
Q Consensus 14 ~~~~~~~~---~~~~~g~W~~l~~~~~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t--- 87 (535)
|+++.... -+...++...+.+.......-..-..+++||+.+-.. ..+..+|+.+
T Consensus 4 ll~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~-------------------~~I~~~~~~g~~~ 64 (316)
T 1ijq_A 4 LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQ-------------------RMICSTQLDRAHG 64 (316)
T ss_dssp EEEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTT-------------------TEEEEEEC-----
T ss_pred EEEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCC-------------------CcEEEEECCCCCC
Q ss_pred -CCEEECccccccccccceec-CCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecC--CCCcccccceEEEec-CCcEE
Q 009420 88 -NEFRPLFVQSNVWCSSGAVR-PDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEID--GLGARRWYATDHILP-DGRII 162 (535)
Q Consensus 88 -~~w~~~~~~~~~~c~~~~~l-~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~--~m~~~R~y~s~~~L~-dG~vy 162 (535)
...+.+-...-..-.+.++- .+++||++-... ..++++|+. ...-..+. .+..+| ..++-+ +|++|
T Consensus 65 ~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~---~~I~~~~~~---g~~~~~~~~~~~~~P~---~iavdp~~g~ly 135 (316)
T 1ijq_A 65 VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL---GTVSVADTK---GVKRKTLFRENGSKPR---AIVVDPVHGFMY 135 (316)
T ss_dssp ---CEEEECSSCSCCCEEEEETTTTEEEEEETTT---TEEEEEETT---SSSEEEEEECTTCCEE---EEEEETTTTEEE
T ss_pred CcccEEEEeCCCCCcCEEEEeecCCeEEEEECCC---CEEEEEeCC---CCceEEEEECCCCCcc---eEEeCCCCCEEE
Q ss_pred EEcCccCCeeEEE-eCCCCCCeeeeccccccCCccccCCCcceEEEee--CCcEEEE--ecCeEEEEECCCC
Q 009420 163 IIGGRRQFNYEFY-PKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNV--DGFLFIF--ANNRAILFDYVNN 229 (535)
Q Consensus 163 vvGG~~~~~~E~y-P~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~--dG~ifv~--gg~~~~~yDp~t~ 229 (535)
+..-.....++.+ +...........-+.. |...++- +++||+. +.+.++++|....
T Consensus 136 ~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~-----------P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 136 WTDWGTPAKIKKGGLNGVDIYSLVTENIQW-----------PNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp EEECSSSCEEEEEETTSCCEEEEECSSCSC-----------EEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEccCCCCeEEEEcCCCCCeEEEEECCCCC-----------ceEEEEeccCCEEEEEECCCCeEEEEecCCC
No 273
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=26.10 E-value=5.8e+02 Score=26.58 Aligned_cols=157 Identities=12% Similarity=0.033 Sum_probs=79.3
Q ss_pred eEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECC-CCCEEECcccccccc-ccceecCCCcEEEEcCC
Q 009420 41 MHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVL-TNEFRPLFVQSNVWC-SSGAVRPDGVLIQTGGF 118 (535)
Q Consensus 41 ~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~-t~~w~~~~~~~~~~c-~~~~~l~dG~l~v~GG~ 118 (535)
.|++++.+|++++---.. .. +|. .....+|.-. -.+|+.........+ ...+-+.||+|++.--.
T Consensus 328 G~GI~l~dGrLv~P~~~~-~~------~g~------~~s~i~~S~D~G~TW~~~~~~~~~~~e~~vve~~dG~L~~~~R~ 394 (523)
T 4fj6_A 328 GRGITMQDGTLVFPIQFI-DA------TRV------PNAGIMYSKDRGKTWHLHNLARTNTTEAQVAEVEPGVLMLNMRD 394 (523)
T ss_dssp EECEECTTSCEEEEEEEE-CT------TSC------EEEEEEEESSTTSSCEECCCSEETEEEEEEEEEETTEEEEEEEE
T ss_pred CcceEEeCCeEEEEEEEE-cC------CCC------EEEEEEEECCCCCeEEECCCCCccccCCEEEEecCCEEEEEEEe
Confidence 466777788877543211 00 121 1223455544 467988764432222 22334568999984211
Q ss_pred C-CCCCeEEEEcCCCCCCCCceecC----CCCcccccceEEEec-----C-CcEEEEcCcc----CCeeEEE-eCCCCCC
Q 009420 119 N-DGEKKIRSFVPCNDESCDWKEID----GLGARRWYATDHILP-----D-GRIIIIGGRR----QFNYEFY-PKNGAPN 182 (535)
Q Consensus 119 ~-~g~~~v~~ydp~~~~~~~W~~~~----~m~~~R~y~s~~~L~-----d-G~vyvvGG~~----~~~~E~y-P~~~~~~ 182 (535)
. ++... +|-..+ ...+|++.. .|+.+....++..+. + .+++++..-. .....+| ...++..
T Consensus 395 ~~~g~r~--v~~S~D-~G~TWt~~~~~~~~L~~P~c~~Sii~~~~~~~~~g~~~lL~snp~~~~~R~~l~v~~S~D~G~T 471 (523)
T 4fj6_A 395 NRGGSRA--VATTKD-LGKTWTEHPSSRSALQESVCMASLIKVNAKDNITGKDLLLFSNPNTTKGRNHITIKASLDGGLT 471 (523)
T ss_dssp TTCSBCE--EEEESS-TTSSCEECTTTTTSSBCSSCCCEEEEECGGGSTTCSCEEEEEEECCSSSSCCEEEEEESSTTSC
T ss_pred cCCCcEE--EEEECC-CCCccCcCcCccccCCCCCcccEEEEEecccCCCCCcEEEEEccCCCCccccceEEEeCCCCCC
Confidence 1 12222 222221 156899863 577777666665553 1 2455555322 1223455 4333557
Q ss_pred eeeec-cccccCCccccCCCcceEEEeeCCcEEEEe
Q 009420 183 VYSLP-FLVQTNDPRVENNLYPFVFLNVDGFLFIFA 217 (535)
Q Consensus 183 w~~~~-~l~~~~~~~~~~~~yp~~~~~~dG~ifv~g 217 (535)
|.... .+.... ...-||.+..++||+|.++-
T Consensus 472 W~~~~~v~~~~~----~~~~Ys~l~~~~dG~i~ilY 503 (523)
T 4fj6_A 472 WPTEHQVLLDEA----EGWGYSCLSMIDKETVGIFY 503 (523)
T ss_dssp CCGGGEEEEECS----CCCCCEEEEECSSSEEEEEE
T ss_pred CccCceEEEcCC----CCcccceEEEcCCCEEEEEE
Confidence 75321 111110 12359999999999987653
No 274
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=26.02 E-value=2.8e+02 Score=27.04 Aligned_cols=114 Identities=14% Similarity=0.102 Sum_probs=59.1
Q ss_pred ceEEcccCCCcceeEEEEeeCCeEEEEecCCCCCCCCCCCCCccccCCCCceeEEEECCCCCEEECccc---c--ccccc
Q 009420 28 GWQLLQKSIGISSMHMQLLNNDRVVMFDRSDFGPSNLSLPPGKCLKTDCTAHSVEYSVLTNEFRPLFVQ---S--NVWCS 102 (535)
Q Consensus 28 ~W~~l~~~~~~~~~~~~~~~~gkv~v~gg~~~~~~~~~~~~G~~~~~d~~~~~~~yDp~t~~w~~~~~~---~--~~~c~ 102 (535)
+.+.+.. --..+.+.+..++|+|||.... | .+.++|+ +++ +.+... . .....
T Consensus 20 ~~~~va~-~l~~P~~ia~~pdG~l~V~e~~-----------g---------~I~~~d~-~G~-~~~~~~~v~~~g~~g~~ 76 (354)
T 3a9g_A 20 KISEVAS-DLEVPWSIAPLGGGRYLVTERP-----------G---------RLVLISP-SGK-KLVASFDVANVGEAGLL 76 (354)
T ss_dssp EEEEEEC-SCSCEEEEEEEETTEEEEEETT-----------T---------EEEEECS-SCE-EEEEECCCCCSTTCSEE
T ss_pred EEEEEeC-CCCCCeEEEEcCCCeEEEEeCC-----------C---------EEEEEeC-CCc-eEeeccceeecCCCcee
Confidence 4555553 1234667777899999998742 2 2455563 333 333211 1 11223
Q ss_pred cceecCC----CcEEEEcCC--CC--CCCeEEEEcCCCCCCC--Cc---eec-CCCCcc--cccceEEEecCCcEEEEcC
Q 009420 103 SGAVRPD----GVLIQTGGF--ND--GEKKIRSFVPCNDESC--DW---KEI-DGLGAR--RWYATDHILPDGRIIIIGG 166 (535)
Q Consensus 103 ~~~~l~d----G~l~v~GG~--~~--g~~~v~~ydp~~~~~~--~W---~~~-~~m~~~--R~y~s~~~L~dG~vyvvGG 166 (535)
+.++-+| |+|||.--. .+ ....+.+|++. .. +. +.+ ..++.. +.-...+.-+||++|+.-|
T Consensus 77 gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~---~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 77 GLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLD---GSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEEC---SSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred eEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEEC---CCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 3444454 899986321 01 11467888876 32 22 221 112211 2223566677999999866
Q ss_pred c
Q 009420 167 R 167 (535)
Q Consensus 167 ~ 167 (535)
.
T Consensus 154 ~ 154 (354)
T 3a9g_A 154 D 154 (354)
T ss_dssp C
T ss_pred C
Confidence 4
No 275
>2vov_A MOPE, surface-associated protein; metal-binding protein, oxidized tryptophan, methanotroph bacterium, kunurenine, copper binding; HET: KYN; 1.35A {Methylococcus capsulatus} PDB: 2vox_A* 2vow_A
Probab=24.49 E-value=78 Score=28.44 Aligned_cols=32 Identities=34% Similarity=0.962 Sum_probs=23.6
Q ss_pred ceEEEEEcCCCCCcCCCcceEEEEEc-----------CC----------cCCccEEEEe
Q 009420 497 GYEIVVNSPGSGNLAPSGYYLLFVVH-----------QD----------VPSEGIWVHV 534 (535)
Q Consensus 497 ~~~~~~~~P~~~~~~ppG~ymlf~~~-----------~g----------vPS~a~~v~i 534 (535)
..+-.+++|. -|||||+|-| +| ||..+-||.|
T Consensus 279 aftksitlpk------tgyymlyvanvlevddwsvdadgkltttgevwevpakgcwvni 331 (336)
T 2vov_A 279 AFTKSITLPK------TGYYMLYVANVLEVDDWSVDADGKLTTTGEVWEVPAKGCWVNI 331 (336)
T ss_dssp EEEEEEECSS------SEEEEEEEEECCEESEEEECTTCCEEEESCCCCSSSSEEEEEE
T ss_pred eeeeeeeccC------cceEEEEEeeeEEeccceeccCCceeecceEEeccCCceEEEE
Confidence 4555667774 5999999864 12 8999999887
No 276
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=24.20 E-value=2e+02 Score=30.42 Aligned_cols=78 Identities=10% Similarity=0.015 Sum_probs=42.3
Q ss_pred ceeEEEECCCCC--EEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEE
Q 009420 78 AHSVEYSVLTNE--FRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHI 155 (535)
Q Consensus 78 ~~~~~yDp~t~~--w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~ 155 (535)
..+..+|+.|++ |+.-.. . ....+..+..+|.||+ |.. + ..++.||..+ ++..|+.-. ...-...-++.
T Consensus 466 G~l~A~D~~tG~~~W~~~~~-~-~~~~g~~~tagglvf~-g~~-d--g~l~A~D~~t-G~~lW~~~~--~~g~~a~P~~y 536 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEH-L-PLWAGVLATAGNLVFT-GTG-D--GYFKAFDAKS-GKELWKFQT--GSGIVSPPITW 536 (582)
T ss_dssp EEEEEECTTTCCEEEEEEES-S-CCCSCCEEETTTEEEE-ECT-T--SEEEEEETTT-CCEEEEEEC--SSCCCSCCEEE
T ss_pred ceEEEEECCCCCEEEEecCC-C-CCcccceEeCCCEEEE-ECC-C--CcEEEEECCC-CCEEEEecC--CCCcccCceEE
Confidence 457789999987 664321 1 2223344555777666 433 3 5788999872 122476422 22221111222
Q ss_pred ecCCcEEEE
Q 009420 156 LPDGRIIII 164 (535)
Q Consensus 156 L~dG~vyvv 164 (535)
..||++||.
T Consensus 537 ~~~G~qYv~ 545 (582)
T 1flg_A 537 EQDGEQYLG 545 (582)
T ss_dssp EETTEEEEE
T ss_pred EECCEEEEE
Confidence 249999988
No 277
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=24.16 E-value=1.3e+02 Score=28.85 Aligned_cols=58 Identities=12% Similarity=0.091 Sum_probs=36.5
Q ss_pred eEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCccc-ccceeecCCCcEEEecCCC
Q 009420 321 MTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMY-HSTAVLLRDGRVLVGGSNP 396 (535)
Q Consensus 321 ~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~y-hs~a~LlpDG~V~v~GG~~ 396 (535)
+++-++|+||+..-.. ..+.+|||++. ++..+...+ +.. .....+-+||++||+....
T Consensus 253 ia~d~~G~l~va~~~~-------------~~V~~~d~~~G---~~~~~~~~~--~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 253 ISIDKDHNIYVGDLAH-------------SAIGVITSADR---AYKLLVTDE--KLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEECTTCCEEEEEGGG-------------TEEEEEETTTT---EEEEEEECG--GGSCEEEEEECTTSCEEEEECCG
T ss_pred EEECCCCCEEEEccCC-------------CeEEEEECCCC---CEEEEEECC--ceecCCeeEECCCCcEEEEeCcc
Confidence 3455789999975322 15799999666 666554332 222 2233445899999998754
No 278
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=24.03 E-value=1.7e+02 Score=31.14 Aligned_cols=97 Identities=13% Similarity=0.179 Sum_probs=51.5
Q ss_pred CcEEEEEcCCCCCcccccccccccccCCceEEEEe-cCCCCCeeee-cCCCC-----c---eeceeEEc--cCCe----E
Q 009420 266 AAEVLVCGGAPKGAYEQAEKGVFVAALNTCARIKI-TDPTPTWVLE-TMPQP-----R---VMGDMTLL--PNGN----V 329 (535)
Q Consensus 266 ~gkIyv~GG~~~~~~~~~~~~~~~pa~~s~e~~d~-~~~~~~W~~~-~m~~~-----R---~~~~~v~l--pdG~----I 329 (535)
+++||++...+ ..+.++|. .+....|+.. ..... + ...+ +++ -+|+ |
T Consensus 62 ~g~vyv~~~~~----------------~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g-~av~p~~g~~~~rV 124 (599)
T 1w6s_A 62 DGKMYIHTSFP----------------NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRG-LAYWPGDGKTPALI 124 (599)
T ss_dssp TTEEEEECSTT----------------TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCC-CEEECCCSSSCCEE
T ss_pred CCEEEEEeCCC----------------CEEEEEeCCCCCcEEEEECCCCCccccccccccccccc-eEEEecCCcceeEE
Confidence 88999886521 23567787 6655679876 32211 1 1122 334 4788 8
Q ss_pred EEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCCcccccceeecCCCcEEEecC
Q 009420 330 LLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIPRMYHSTAVLLRDGRVLVGGS 394 (535)
Q Consensus 330 ~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~LlpDG~V~v~GG 394 (535)
|+... + + .+.++|.++.+ ..|+.-..-.........+-++.+|+|||..+
T Consensus 125 ~v~t~-d-g------------~l~AlDa~TG~-~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~ 174 (599)
T 1w6s_A 125 LKTQL-D-G------------NVAALNAETGE-TVWKVENSDIKVGSTLTIAPYVVKDKVIIGSS 174 (599)
T ss_dssp EEECT-T-S------------EEEEEETTTCC-EEEEEECCCGGGTCBCCSCCEEETTEEEECCB
T ss_pred EEEcC-C-C------------EEEEEECCCCC-EEEeecCCCCCccceeecCCEEECCEEEEEec
Confidence 87532 1 1 46788988762 25875322111111111233345899988664
No 279
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=23.74 E-value=6.4e+02 Score=26.33 Aligned_cols=174 Identities=17% Similarity=0.168 Sum_probs=84.0
Q ss_pred cceE-EEeeCCcEEEEec---CeEEEEECCCCeEEEecCCCCC-CCCCCCCCCCceEeecccccCCCCCCcEEEEEcCCC
Q 009420 202 YPFV-FLNVDGFLFIFAN---NRAILFDYVNNKVVKQYPAIPG-GDPRSYPSSGSAVLLPLKNLLAPSVAAEVLVCGGAP 276 (535)
Q Consensus 202 yp~~-~~~~dG~ifv~gg---~~~~~yDp~t~~W~~~~p~~p~-~~~R~~~~~g~~v~lpl~~~~~~~~~gkIyv~GG~~ 276 (535)
+++. ...+||+.|+.++ +.+.++|.++++-...++ . + ..-.|..|+...-| ..+.+|+.+-..
T Consensus 343 ~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~---vgg-~~Phpg~g~~~~~p--------~~g~v~~t~~~g 410 (567)
T 1qks_A 343 FLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED---TGG-QTPHPGRGANFVHP--------TFGPVWATSHMG 410 (567)
T ss_dssp SEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE---CSS-SSBCCTTCEEEEET--------TTEEEEEEEBSS
T ss_pred cccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEe---ccC-cCCCCccceeeECC--------CCCcEEEeCCCC
Confidence 4443 3567898766653 578899999998654332 2 1 11122123332222 136777765221
Q ss_pred CCcccccccccccccCCceEEEEecCC---CCCeeee-cCCCC-ceeceeEEccCCe-EEEEcCCCCCCCCcccCCCCcc
Q 009420 277 KGAYEQAEKGVFVAALNTCARIKITDP---TPTWVLE-TMPQP-RVMGDMTLLPNGN-VLLINGAGKGTAGWELGRDPVL 350 (535)
Q Consensus 277 ~~~~~~~~~~~~~pa~~s~e~~d~~~~---~~~W~~~-~m~~~-R~~~~~v~lpdG~-I~vvGG~~~g~~g~~~~~~~~~ 350 (535)
..++..||.... ...|+.. .++.. ........-||++ +||-.-.+.. .+...
T Consensus 411 ---------------~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~-------~~~~~ 468 (567)
T 1qks_A 411 ---------------DDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPE-------AEISG 468 (567)
T ss_dssp ---------------SSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSS-------HHHHT
T ss_pred ---------------CCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCC-------cccCc
Confidence 123555664421 1238765 43322 1112233568875 6664421100 00012
Q ss_pred ccEEEeCCCC--C--CCceeecC-----CC--CCCcccccceeecCCCc-EEEecCCCCccccccCCCCCceeeEEEEcC
Q 009420 351 APVVYRPDNI--P--GSRFDLQN-----PS--TIPRMYHSTAVLLRDGR-VLVGGSNPHAYYNFTGVLFPTELSLEAFSP 418 (535)
Q Consensus 351 ~~e~YDP~t~--~--g~~Wt~~~-----~~--~~~R~yhs~a~LlpDG~-V~v~GG~~~~~~~~~~~~~~~~~~vE~y~P 418 (535)
++.+||-.+. . ...++.+. .+ .-.|..|- -+-+||+ ||++-.+... .+..|.+|+.
T Consensus 469 ~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~G~~~~~s~~~~~~----------~~~~i~v~D~ 536 (567)
T 1qks_A 469 SVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQG--EFNKDGTEVWFSVWNGKD----------QESALVVVDD 536 (567)
T ss_dssp CEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEE--EECTTSSEEEEEEECCTT----------SCCEEEEEET
T ss_pred eEEEEECCcccccccCCCcEEeccccccccCCCCcceEee--eECCCCCEEEEEeecCCC----------CCCcEEEEEC
Confidence 6789987654 1 11233331 11 12455562 3457885 7777332111 1336778887
Q ss_pred CCC
Q 009420 419 YYL 421 (535)
Q Consensus 419 pyl 421 (535)
..+
T Consensus 537 ~t~ 539 (567)
T 1qks_A 537 KTL 539 (567)
T ss_dssp TTT
T ss_pred CCc
Confidence 775
No 280
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=23.59 E-value=1.5e+02 Score=29.57 Aligned_cols=49 Identities=10% Similarity=0.016 Sum_probs=32.3
Q ss_pred eeEEEECCCCCEEECcccc-ccccccceecCCCcEEEEcCCCCCCCeEEEEcC
Q 009420 79 HSVEYSVLTNEFRPLFVQS-NVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVP 130 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp 130 (535)
.+.+||..+++-...-..+ +......++-+||++++.|+.+ +++++||.
T Consensus 306 TIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D---~TIklWd~ 355 (356)
T 2w18_A 306 TIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKD---GNIFVYHY 355 (356)
T ss_dssp CEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTT---SCEEEEEE
T ss_pred cEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECC---CcEEEecC
Confidence 5789999999865432212 2222223567899999999874 67888874
No 281
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=22.66 E-value=2.1e+02 Score=30.55 Aligned_cols=78 Identities=9% Similarity=0.082 Sum_probs=42.4
Q ss_pred ceeEEEECCCCC--EEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEE
Q 009420 78 AHSVEYSVLTNE--FRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHI 155 (535)
Q Consensus 78 ~~~~~yDp~t~~--w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~ 155 (535)
..+..+|++|++ |+.-... ....+..+..+|.||+ |.. + ..++.||..+ ++..|+. .+...-...-++.
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagg~vf~-gt~-d--g~l~A~D~~t-G~~lW~~--~l~~g~~~~P~~y 523 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERF--AVWGGTMATAGDLVFY-GTL-D--GYLKARDSDT-GDLLWKF--KIPSGAIGYPMTY 523 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEE-ECT-T--SEEEEEETTT-CCEEEEE--ECSSCCCSCCEEE
T ss_pred CeEEEEECCCCCEEeEecCCC--CccCcceEecCCEEEE-ECC-C--CeEEEEECCC-CCEEEEe--eCCCCcEeccEEE
Confidence 357788999987 7642211 1222334455777776 433 2 4689999882 1234764 2332222111222
Q ss_pred ecCCcEEEE
Q 009420 156 LPDGRIIII 164 (535)
Q Consensus 156 L~dG~vyvv 164 (535)
..||++||+
T Consensus 524 ~~~G~qyv~ 532 (599)
T 1w6s_A 524 THKGTQYVA 532 (599)
T ss_dssp EETTEEEEE
T ss_pred EeCCEEEEE
Confidence 249999986
No 282
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=21.78 E-value=4.6e+02 Score=23.96 Aligned_cols=127 Identities=12% Similarity=0.063 Sum_probs=62.4
Q ss_pred eeEEEECC-CCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCCceecCCCCcccccceEEEec
Q 009420 79 HSVEYSVL-TNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPCNDESCDWKEIDGLGARRWYATDHILP 157 (535)
Q Consensus 79 ~~~~yDp~-t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~~~W~~~~~m~~~R~y~s~~~L~ 157 (535)
.+..||+. ...|+.-. ........+...+|+|++.. . ...+..||+.. ...|..-.+ ... ..+.+.-.
T Consensus 118 ~l~~~d~~g~~~~~~~~--~~~~~~~~~~~~~g~l~vgt-~---~~~l~~~d~~g--~~~~~~~~~--~~~-~~~~~~d~ 186 (330)
T 3hxj_A 118 HLYAINTDGTEKWRFKT--KKAIYATPIVSEDGTIYVGS-N---DNYLYAINPDG--TEKWRFKTN--DAI-TSAASIGK 186 (330)
T ss_dssp EEEEECTTSCEEEEEEC--SSCCCSCCEECTTSCEEEEC-T---TSEEEEECTTS--CEEEEEECS--SCC-CSCCEECT
T ss_pred EEEEEcCCCCEEEEEcC--CCceeeeeEEcCCCEEEEEc-C---CCEEEEECCCC--CEeEEEecC--CCc-eeeeEEcC
Confidence 36778887 22344322 11122223344588888743 2 14688899861 344654322 122 22344445
Q ss_pred CCcEEEEcCccCCeeEEEeCCCCCCeeeeccccccCCccccCCCcceEEEeeCCcEEEEec-CeEEEEECCCCe
Q 009420 158 DGRIIIIGGRRQFNYEFYPKNGAPNVYSLPFLVQTNDPRVENNLYPFVFLNVDGFLFIFAN-NRAILFDYVNNK 230 (535)
Q Consensus 158 dG~vyvvGG~~~~~~E~yP~~~~~~w~~~~~l~~~~~~~~~~~~yp~~~~~~dG~ifv~gg-~~~~~yDp~t~~ 230 (535)
+|.||+.. ..+.+|..+....|..... . +.........+|+||+... ....+||+....
T Consensus 187 ~g~l~v~t----~~l~~~d~~g~~~~~~~~~--~--------~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~ 246 (330)
T 3hxj_A 187 DGTIYFGS----DKVYAINPDGTEKWNFYAG--Y--------WTVTRPAISEDGTIYVTSLDGHLYAINPDGTE 246 (330)
T ss_dssp TCCEEEES----SSEEEECTTSCEEEEECCS--S--------CCCSCCEECTTSCEEEEETTTEEEEECTTSCE
T ss_pred CCEEEEEe----CEEEEECCCCcEEEEEccC--C--------cceeceEECCCCeEEEEcCCCeEEEECCCCCE
Confidence 88888765 2233332111112321100 0 0011234455789998764 578888986554
No 283
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=21.04 E-value=98 Score=31.26 Aligned_cols=50 Identities=18% Similarity=0.151 Sum_probs=32.0
Q ss_pred eeEEEECCCCCEEECccccccccccceecCCCcEEEEcCCCCCCCeEEEEcCC
Q 009420 79 HSVEYSVLTNEFRPLFVQSNVWCSSGAVRPDGVLIQTGGFNDGEKKIRSFVPC 131 (535)
Q Consensus 79 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 131 (535)
.+.+||.++++-......+.....+.+.-++|+.+++|+.+ ..+.+||+.
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d---g~v~iwd~~ 222 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN---GTVVQYLPT 222 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT---SCEEEECTT
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC---CcEEEEccC
Confidence 47899998873321111222223334566799999999863 578999986
No 284
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=20.26 E-value=8.3e+02 Score=26.30 Aligned_cols=87 Identities=16% Similarity=0.177 Sum_probs=47.9
Q ss_pred CCCCCeeee-cCCCCceeceeEEccCCeEEEEcCCCCCCCCcccCCCCccccEEEeCCCCCCCceeecCCCCCC----cc
Q 009420 302 DPTPTWVLE-TMPQPRVMGDMTLLPNGNVLLINGAGKGTAGWELGRDPVLAPVVYRPDNIPGSRFDLQNPSTIP----RM 376 (535)
Q Consensus 302 ~~~~~W~~~-~m~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~----R~ 376 (535)
+...+|+.. .++.....+.+++-+++.+|+..+...+. |. ......+..++-... +|+.+.+.+.. +.
T Consensus 229 DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~--y~--~~~~g~v~~s~d~G~---tW~~i~~~~~~~~~~~~ 301 (737)
T 2cn3_A 229 DGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGP--YD--GNGKGQVWKFNTRTG---EWIDITPIPYSSSDNRF 301 (737)
T ss_dssp STTSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCS--SC--CSCCEEEEEEETTTC---CEEECCSSCTTSTTCCS
T ss_pred CCCCceEECCCCCCcccceEEEECCCCeEEEEecCCCCc--cc--cccCceEEEEeCCCC---CEEEccCCCCCCccccc
Confidence 345789987 67765554555566789999986543221 11 001123455564444 99998765432 33
Q ss_pred cccceeecCC--CcEEEecCC
Q 009420 377 YHSTAVLLRD--GRVLVGGSN 395 (535)
Q Consensus 377 yhs~a~LlpD--G~V~v~GG~ 395 (535)
+.+...+-|. ++||+++..
T Consensus 302 ~~~~i~v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 302 CFAGLAVDRQNPDIIMVTSMN 322 (737)
T ss_dssp EEEEEEECTTCTTCEEEEEEC
T ss_pred ccccEEEcCCCCCEEEEEecc
Confidence 2222223332 678887654
Done!