BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009424
(535 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224063635|ref|XP_002301239.1| predicted protein [Populus trichocarpa]
gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/504 (71%), Positives = 417/504 (82%), Gaps = 9/504 (1%)
Query: 1 MILQPSLHNHHKICLSQ--SRTQPLPCKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIH 58
M+LQPSLH HHK+ LS S + PLP K P FT LHQ K KLPVI CS+SQIH
Sbjct: 1 MLLQPSLH-HHKVSLSSTISYSHPLPWKNPN-FT-LHQTVNYK----KLPVITCSISQIH 53
Query: 59 SYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRK 118
+YGTVD+ERRPM+KWNAI+R++SLM+NP+LGS SVLN WE G+ LTKWELCRVVKELRK
Sbjct: 54 NYGTVDYERRPMMKWNAIYRRISLMENPELGSGSVLNQWENDGKRLTKWELCRVVKELRK 113
Query: 119 FRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV 178
++RY+ ALEVYDWMNNR ERF LS SDAAIQLDLIAKV GV+SAEDFFL LP+T KDRR+
Sbjct: 114 YKRYQQALEVYDWMNNRQERFGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRI 173
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGALLNAYVR RMR AE LID+MR K Y H+LPYNVMMTLYM I EYD+V+ ++SEM
Sbjct: 174 YGALLNAYVRNRMREKAESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMN 233
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EK I+LD+YSYNIWLSSCG QGS +KME VFE MK D ++NPNWTTFSTMATMYIKMG+
Sbjct: 234 EKNIKLDIYSYNIWLSSCGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKF 293
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
EKAE+ LRRVESRITGRDR+PYHYLLSLYG+VG KEEVYRVWN+Y+S+FP + NLGYHAM
Sbjct: 294 EKAEDCLRRVESRITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAM 353
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
ISSL R+ DIEG EKI+EEWLS+K+SYDPRIANL M+ +V +GN DKAE+FF+ ++EEGG
Sbjct: 354 ISSLVRMDDIEGAEKIYEEWLSIKTSYDPRIANLFMAAFVYQGNLDKAESFFDHMLEEGG 413
Query: 419 KPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMG 478
KPNS SWE LA+GHI ERR EALSCLK AFA G+KSW+P P NV +FFK CEEE DM
Sbjct: 414 KPNSHSWEILAQGHISERRTSEALSCLKEAFATPGSKSWKPNPANVSSFFKLCEEEVDMA 473
Query: 479 SKEAFVALLRQPGYRKEKDYMSLI 502
SKEA + LRQ G+ K+K Y L+
Sbjct: 474 SKEALASFLRQSGHLKDKAYALLL 497
>gi|224137116|ref|XP_002327026.1| predicted protein [Populus trichocarpa]
gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/543 (66%), Positives = 440/543 (81%), Gaps = 18/543 (3%)
Query: 1 MILQPSLHNHHKICLSQSRTQP--LPCKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIH 58
M+LQP+LH HHK+ LS S + +P K P+ + LHQ + H+ KLPVI CS+SQ+H
Sbjct: 1 MLLQPALH-HHKVSLSSSISYSHSVPWKSPK--STLHQ--TVNHK--KLPVIICSISQVH 53
Query: 59 SYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRK 118
+YGTVD+ERRPMIKWN I+R++SLM+NP+LGS SVLN WE G+ LTKWELCRVVKELRK
Sbjct: 54 NYGTVDYERRPMIKWNGIYRRISLMENPELGSGSVLNRWENEGKRLTKWELCRVVKELRK 113
Query: 119 FRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV 178
++RY+ ALEVYDWM NR ERFRLS SDAAIQLDLIAKV GV++AEDFFLSLP+T KDRRV
Sbjct: 114 YKRYQQALEVYDWMKNRQERFRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRV 173
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGALLNAYV+ RMR AE L D+MRDKGY H+LP+NV MTLYM IKEYD+V+ M+SEM
Sbjct: 174 YGALLNAYVQNRMREKAETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMN 233
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EK I+LD+YSYNIWLSSCGSQGS +KME V+E MK D+++NPNWTTFSTMATMYIKMGQ
Sbjct: 234 EKNIKLDIYSYNIWLSSCGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQF 293
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
EKAE+ LRRVESRITGRDR+PYHYLLSLYG+VG KEEVYRVWN+Y+S+FP + NLGYHA+
Sbjct: 294 EKAEDCLRRVESRITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAI 353
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
ISSL R+ DIEG EKI+EEWLS+K+SYDPRIANL ++ YV +GN D+A++FF+ ++E+GG
Sbjct: 354 ISSLVRLDDIEGAEKIYEEWLSIKTSYDPRIANLFIAAYVYQGNLDEAKSFFDHMLEDGG 413
Query: 419 KPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMG 478
KPNS +WE LA+GHI ERR EALSCLK AF G+KSW+P P NV +FFK CEEE+DM
Sbjct: 414 KPNSNTWEILAQGHISERRTSEALSCLKEAFVTPGSKSWKPNPANVTSFFKLCEEEADMA 473
Query: 479 SKEAFVALLRQPGYRKEKDYMSLIGLT---DEAVAENNKKNDE------DSDEDSEMLLS 529
+KEA LRQ G+ K+K Y SL+G+ DE + + D+ D D+ +EML+S
Sbjct: 474 NKEALEGFLRQSGHLKDKAYASLLGMPVTGDELSTKEDGTGDQIDNEEDDEDDGAEMLVS 533
Query: 530 QLQ 532
LQ
Sbjct: 534 HLQ 536
>gi|255571041|ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/537 (65%), Positives = 435/537 (81%), Gaps = 13/537 (2%)
Query: 1 MILQPSLHNHHKICLSQ--SRTQPLPCKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIH 58
M+LQPSL NH + LS S ++PLP K P +T LHQ + KLP I CS+S++H
Sbjct: 2 MLLQPSL-NHQQASLSSTISYSRPLPWKNPH-YT-LHQTVNYR----KLP-ITCSISKVH 53
Query: 59 SYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRK 118
SYGTVD+ERRPMIKWN+++R++SLM+ P+LG+A+VLN+ EK G+ LTKWELCRVVKELRK
Sbjct: 54 SYGTVDYERRPMIKWNSVYRRISLMEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRK 113
Query: 119 FRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV 178
++R+K ALEVYDWMNNR ERFRLSASDAAIQLDL+AKV GV+SAED+F+ L D +KDRRV
Sbjct: 114 YKRHKQALEVYDWMNNREERFRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRV 173
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGALLN+YV+ARMR AE LI+KMR K Y H+LP+NVMMTLYM +KEYD+V+ M+SEM
Sbjct: 174 YGALLNSYVKARMREKAESLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMM 233
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
K IRLD+YSYNIWLSS GSQGS E+ME V+E MK+D +NPNWTTFSTMATMYIKMGQ+
Sbjct: 234 AKNIRLDIYSYNIWLSSRGSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQL 293
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
EKAE+ LRRVESRITGRDR+PYHYLLSLYG+VG KEE+YRVWN+Y+S+F + NLGYHA+
Sbjct: 294 EKAEDCLRRVESRITGRDRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAI 353
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
ISSL R+ DIEG EKI+EEWL VKSSYDPRI NL+M WYV+ GN DKAE+FF+ ++E GG
Sbjct: 354 ISSLVRMDDIEGAEKIYEEWLPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGG 413
Query: 419 KPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMG 478
KPNS++WE LA+GH RE+RI EALSC K AF A+G+KSW+PKPV + +FFK CEEE+DM
Sbjct: 414 KPNSSTWEILADGHTREKRISEALSCFKEAFLAQGSKSWKPKPVIISSFFKLCEEEADMA 473
Query: 479 SKEAFVALLRQPGYRKEKDYMSLIGL---TDEAVAENNKKNDEDSDEDSEMLLSQLQ 532
S LL Q GY ++K Y SLIG ++E E ++ D + E++E L+QLQ
Sbjct: 474 STGVLEDLLAQSGYLEDKTYASLIGSSVPSNELSTEKDRTGDRNEVEENETFLNQLQ 530
>gi|449432307|ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
gi|449525818|ref|XP_004169913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/529 (63%), Positives = 423/529 (79%), Gaps = 11/529 (2%)
Query: 1 MILQPSLHNHHKICLSQSRTQPLPCKIPRCFTRLHQQSAIKHQ--RQKLPV-IKCSMSQI 57
M+LQ S+H H + L P P R F L Q H ++LP+ + CS+SQ+
Sbjct: 1 MLLQTSVH-HRTVSL------PSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQV 53
Query: 58 HSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELR 117
HSYGTVDFERRPM KWNAI+R++SLM+NP+LGSASVLN WE G+++TKWEL RVVKELR
Sbjct: 54 HSYGTVDFERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELR 113
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRR 177
K++R++ ALE+YDWM+NR ERFRL+ SDAAIQLDLI+KV G+ SAE++FL LP+ LKDRR
Sbjct: 114 KYKRFERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRR 173
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+YGALLNAY + R R AE L++KMR KG+ H LP+NVMMTLYM +KEY++VES+VSEM
Sbjct: 174 IYGALLNAYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEM 233
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E I+LD+YSYNIWLSSCG QGSTEKME V+E MK D+ +N NWTTFSTMATMYIKMG
Sbjct: 234 TENSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGL 293
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+EKAEE LRRVESRI GRDR+PYHYL+SLYGSVG KEE+YRVWN+Y++VFP + NLGYHA
Sbjct: 294 MEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHA 353
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+IS+L R+GD+EG EKI+EEWL+VKS+YDPRIANL + WYVKEGN KAE+FF+ ++E G
Sbjct: 354 IISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVG 413
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
GKPNS++WE L + H +E R+ +AL+ K AF+AEG+KSWRPKP NV+ +F CE+E D+
Sbjct: 414 GKPNSSTWEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDI 473
Query: 478 GSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKNDEDSDEDSEM 526
SKE V LLRQP Y ++K Y SLIGL DE + +NN+ +++ S+ + E+
Sbjct: 474 ASKEVLVGLLRQPKYLQDKTYASLIGLLDETI-DNNEVSEKGSNINDEI 521
>gi|297848282|ref|XP_002892022.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337864|gb|EFH68281.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 523
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/533 (62%), Positives = 424/533 (79%), Gaps = 14/533 (2%)
Query: 1 MILQPSLHNHHKICLSQSRTQPLP-CKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIHS 59
M+L ++ N + S + LP C+ P L +++A I CS+SQ++
Sbjct: 1 MLLPAAVQNSNVPLASSASYSRLPRCRSPVLSVALSKKTA---------AIVCSISQVYG 51
Query: 60 YGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKF 119
YGTVD+ERRP+++WNAI++K+SLM+ P+LG+ASVLN WEKGGR LTKWELCRVVKELRK+
Sbjct: 52 YGTVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKY 111
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVY 179
+R ALEVYDWMNNRGERFRLSASDAAIQLDLI KV G++ AE FFL+LP+ KDRRVY
Sbjct: 112 KRPNQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGISDAEQFFLTLPENFKDRRVY 171
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
G+LLNAYVRA+ R AE L+ MRDKGYA+H LP+NVMMTLYM ++EYD+V++MV EMK+
Sbjct: 172 GSLLNAYVRAKSREKAEALLHTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQ 231
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
K IRLD+YSYNIWLSSCGS GS EKME V++ MK D ++NPNWTTFSTMATMYIKMG+ E
Sbjct: 232 KDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSINPNWTTFSTMATMYIKMGETE 291
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
KAE++LR+VE+RITGR+R+PYHYLLSLYGSVG K+E+YRVWN+Y+SV P + NLGYHA++
Sbjct: 292 KAEDALRKVEARITGRNRIPYHYLLSLYGSVGNKKELYRVWNVYKSVVPSIPNLGYHALV 351
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
SSLAR+GDIEG EK++EEWL VKSSYDPRI NL+M+ YVK +KAE F+ ++E GGK
Sbjct: 352 SSLARMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNVYVKNDQLEKAEGLFDHMVEMGGK 411
Query: 420 PNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGS 479
P+S++WE LA+GH R+R I EAL+CL+ AF+AEG+ +WRPK + + FFK CEEESD+ S
Sbjct: 412 PSSSTWEILADGHTRKRCIPEALTCLRKAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTS 471
Query: 480 KEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKNDEDSDEDSEMLLSQLQ 532
KEA + LLRQ G+ ++K Y +LI + DE ENN + D +++ LL+QLQ
Sbjct: 472 KEAVLELLRQSGHLEDKAYQALIDV-DENRTENNSEIDA---HETDALLTQLQ 520
>gi|22329290|ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150
gi|2317908|gb|AAC24372.1| Unknown protein [Arabidopsis thaliana]
gi|332189272|gb|AEE27393.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 524
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/534 (61%), Positives = 420/534 (78%), Gaps = 15/534 (2%)
Query: 1 MILQPSLHNHH-KICLSQSRTQPLPCKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIHS 59
M+LQ ++ N + + S S ++ L C+ P ++ +K I CS+SQ++
Sbjct: 1 MLLQAAVQNRNVPLASSASYSRLLRCRSPVV--------SVAALSKKTAAIVCSISQVYG 52
Query: 60 YGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKF 119
YGTVD+ERRP+++WNAI++K+SLM+ P+LG+ASVLN WEK GR LTKWELCRVVKELRK+
Sbjct: 53 YGTVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKY 112
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVY 179
+R ALEVYDWMNNRGERFRLSASDAAIQLDLI KV G+ AE+FFL LP+ KDRRVY
Sbjct: 113 KRANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVY 172
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
G+LLNAYVRA+ R AE L++ MRDKGYA+H LP+NVMMTLYM ++EYD+V++MV EMK+
Sbjct: 173 GSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQ 232
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
K IRLD+YSYNIWLSSCGS GS EKME V++ MK D ++ PNWTTFSTMATMYIKMG+ E
Sbjct: 233 KDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETE 292
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
KAE++LR+VE+RITGR+R+PYHYLLSLYGS+G K+E+YRVW++Y+SV P + NLGYHA++
Sbjct: 293 KAEDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALV 352
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
SSL R+GDIEG EK++EEWL VKSSYDPRI NL+M+ YVK + AE F+ ++E GGK
Sbjct: 353 SSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGK 412
Query: 420 PNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGS 479
P+S++WE LA GH R+R I EAL+CL+ AF+AEG+ +WRPK + + FFK CEEESD+ S
Sbjct: 413 PSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTS 472
Query: 480 KEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKNDEDSD-EDSEMLLSQLQ 532
KEA + LLRQ G ++K Y++LI V EN N+ + D +++ LL+QLQ
Sbjct: 473 KEAVLELLRQSGDLEDKSYLALID-----VDENRTVNNSEIDAHETDALLTQLQ 521
>gi|20453085|gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
gi|29028736|gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/534 (60%), Positives = 420/534 (78%), Gaps = 15/534 (2%)
Query: 1 MILQPSLHNHH-KICLSQSRTQPLPCKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIHS 59
M+LQ ++ N + + S S ++ L C+ P ++ +K I CS+SQ++
Sbjct: 1 MLLQAAVQNRNVPLASSASYSRLLRCRSPVV--------SVAALSKKTAAIVCSISQVYG 52
Query: 60 YGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKF 119
YGTVD+ERRP+++WNAI++K+SLM+ P+LG+ASVLN WEK GR LTKWELCRVVKELRK+
Sbjct: 53 YGTVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKY 112
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVY 179
+R A+EVYDWMNNRGERFRLSASDAAIQLDLI KV G+ AE+FFL LP+ KDRRVY
Sbjct: 113 KRANQAIEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVY 172
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
G+LLNAYVRA+ R AE L++ MRDKGYA+H LP+NVMMTLYM ++EYD+V++MV EMK+
Sbjct: 173 GSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQ 232
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
K IRLD+YSYNIWLSSCGS GS EKME V++ MK D ++ PNWTTFSTMATMYIKMG+ E
Sbjct: 233 KDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETE 292
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
KAE++LR+VE+RITGR+R+PYHYLLSLYGS+G K+E+YRVW++Y+SV P + NLGYHA++
Sbjct: 293 KAEDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALV 352
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
SSL R+GDIEG EK++EEWL VKSSYDPRI NL+M+ YVK + AE F+ ++E GGK
Sbjct: 353 SSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGK 412
Query: 420 PNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGS 479
P+S++WE LA GH R+R I EAL+CL+ AF+AEG+ +WRPK + + FFK CEEESD+ S
Sbjct: 413 PSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTS 472
Query: 480 KEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKNDEDSD-EDSEMLLSQLQ 532
KEA + LLRQ G ++K Y++LI V EN N+ + D +++ LL+QLQ
Sbjct: 473 KEAVLELLRQSGDLEDKSYLALID-----VDENRTVNNSEIDAHETDALLTQLQ 521
>gi|225453344|ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/494 (65%), Positives = 399/494 (80%), Gaps = 14/494 (2%)
Query: 50 IKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWEL 109
I CS+SQIHSYGTVD+ERRP++KWNA++R++SLM+NP++GSASVLN WE G+ LTKWEL
Sbjct: 34 ITCSISQIHSYGTVDYERRPLVKWNAVYRRISLMENPEMGSASVLNQWENEGKRLTKWEL 93
Query: 110 CRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL 169
CRVVKELRKF+R+K ALEVY+WMNNRGERFRLS+SDAAIQLDLIAKV GV+SAED+F L
Sbjct: 94 CRVVKELRKFKRFKMALEVYEWMNNRGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRL 153
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PDTLKD+R+YGALLNAYV+A+MR AE+LI+K+R+KGYA LP+NVMMTLYM +KE D+
Sbjct: 154 PDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDK 213
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
V+SM+SEM K I+LD+YSYNIWLSSC S TE+ME VFE MK+++ +NPNWTTFSTMA
Sbjct: 214 VQSMISEMMNKNIQLDIYSYNIWLSSCES---TERMEQVFEQMKLERTINPNWTTFSTMA 270
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
TMYIK+GQ EKAEE L++VESRIT RDR+PYHYL+SLYGS G K EVYR WN+Y+S FP
Sbjct: 271 TMYIKLGQFEKAEECLKKVESRITNRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPN 330
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ NLGYHA+ISSL R+GD+EG EKI+EEWLSVKSSYDPRI NL++ YVKEG +KAE F
Sbjct: 331 IPNLGYHALISSLVRVGDLEGAEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGF 390
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFK 469
+ +IE GGKPNST+WE LAEG+ ++I +ALSC K A AEG+ W+PKPVNV F
Sbjct: 391 LDHMIEAGGKPNSTTWEILAEGNTGVKKISDALSCFKRAVLAEGSNGWKPKPVNVSAFLD 450
Query: 470 ACEEESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKNDED---------- 519
CEEE+D +KEA + LLRQ G +++ Y SL GL +V N N++D
Sbjct: 451 LCEEEADTATKEALMGLLRQMGCLEDEPYASLFGLHTGSVTGNELSNEKDRTGADKDIDE 510
Query: 520 -SDEDSEMLLSQLQ 532
D+ +EMLL+Q Q
Sbjct: 511 DEDDGAEMLLNQFQ 524
>gi|356503236|ref|XP_003520417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 555
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/500 (61%), Positives = 384/500 (76%), Gaps = 14/500 (2%)
Query: 46 KLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLT 105
+L V+ CS+S IHSYGTVD+ERRP+++WN ++R++SL NPQ+GSA VLN WE GR LT
Sbjct: 52 RLSVVTCSISNIHSYGTVDYERRPIVRWNDVYRRISLNQNPQVGSAEVLNQWENEGRHLT 111
Query: 106 KWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF 165
KWEL RVVKELRK++R+ ALEVYDWMNNR ERFR+S SDAAIQLDLIAKV GV+SAE F
Sbjct: 112 KWELSRVVKELRKYKRFPRALEVYDWMNNRPERFRVSESDAAIQLDLIAKVRGVSSAEAF 171
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
FLSL D LKD+R YGALLN YV +R + AE L D MR KGY +H+LP NVMMTLYM +
Sbjct: 172 FLSLEDKLKDKRTYGALLNVYVHSRSKEKAESLFDTMRSKGYVIHALPINVMMTLYMNLN 231
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
EY +V+ + SEM EK I+LD+Y+YNIWLSSCGSQGS EKME VFE M+ D + PNW+TF
Sbjct: 232 EYAKVDMLASEMMEKNIQLDIYTYNIWLSSCGSQGSVEKMEQVFEQMERDPTIVPNWSTF 291
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
ST+A+MYI+M Q EKAE+ LR+VE RI GRDR+P+HYLLSLYGSVGKK+EVYRVWN Y+S
Sbjct: 292 STLASMYIRMNQNEKAEKCLRKVEGRIKGRDRIPFHYLLSLYGSVGKKDEVYRVWNTYKS 351
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+FP + NLGYHA+ISSL ++ DIEG EK++EEW+SVKSSYDPRI NL+M WYVK+ + DK
Sbjct: 352 IFPRIPNLGYHAIISSLVKLDDIEGAEKLYEEWISVKSSYDPRIGNLLMGWYVKKDDTDK 411
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAF-AAEGAKSWRPKPVNV 464
A +FF I +G PNS +WE L+EGHI ++RI EALSCLK AF A G+KSWRPKP +
Sbjct: 412 ALSFFEQISNDGCIPNSNTWEILSEGHIADKRISEALSCLKEAFMVAGGSKSWRPKPSYL 471
Query: 465 INFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAE------------- 511
F + C+E++DM S E + LLRQ + K K Y S+IG D +
Sbjct: 472 SAFLELCQEQNDMESAEVLIGLLRQSKFSKIKVYASIIGSPDCTIDNGELQSKIDITDRT 531
Query: 512 NNKKNDEDSDEDSEMLLSQL 531
++ + E+ D+DS+MLL+QL
Sbjct: 532 DDAVDSENMDDDSQMLLNQL 551
>gi|356522970|ref|XP_003530115.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 546
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/505 (60%), Positives = 386/505 (76%), Gaps = 4/505 (0%)
Query: 31 FTRLHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGS 90
T H QS + + V CS+S+IHSYGTVD+ERRP++ WN ++R++SL NPQ+GS
Sbjct: 38 ITHGHTQSLCFYHPRLSVVTTCSISKIHSYGTVDYERRPIVGWNDVYRRISLNPNPQVGS 97
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
A VLN WE GR LTKWEL RVVKELRK++R++ ALEVYDWMNNR ERFR+S SDAAIQL
Sbjct: 98 AEVLNQWENEGRHLTKWELSRVVKELRKYKRFRRALEVYDWMNNRPERFRVSESDAAIQL 157
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
DLIAKV G++SAE FFLSL D LKD++ YGALLN YV +R + AE L D MR KGY +H
Sbjct: 158 DLIAKVRGLSSAEAFFLSLEDKLKDKKTYGALLNVYVHSRSKEKAESLFDTMRSKGYVIH 217
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
+LP+NVMMTLYM + EY +V+ + SEM EK I+LD+Y+YNIWLSSCGSQGS EKME VFE
Sbjct: 218 ALPFNVMMTLYMNLNEYAKVDILASEMMEKNIQLDIYTYNIWLSSCGSQGSVEKMEQVFE 277
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M+ D ++ PNW+TFSTMA+MYI+M Q EKAEE LR+VE RI GRDR+P+HYLLSLYGSV
Sbjct: 278 QMEKDPSIIPNWSTFSTMASMYIRMDQNEKAEECLRKVEGRIKGRDRIPFHYLLSLYGSV 337
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
GKK+EV RVWN Y+S+FP + NLGYHA+ISSL ++ DIE EK++EEW+SVKSSYDPRI
Sbjct: 338 GKKDEVCRVWNTYKSIFPSIPNLGYHAIISSLVKLDDIEVAEKLYEEWISVKSSYDPRIG 397
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAF- 449
NL++ WYVK+G+ DKA +FF ++ +G PNS +WE L+EGHI ++RI EA+SCLK AF
Sbjct: 398 NLLIGWYVKKGDTDKALSFFEQMLNDGCIPNSNTWEILSEGHIADKRISEAMSCLKEAFM 457
Query: 450 AAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAV 509
AA G+KSWRPKP + F + C+E+ DM S E + LLRQ + K K Y SLIG +DE
Sbjct: 458 AAGGSKSWRPKPSYLSAFLELCQEQDDMESAEVLIGLLRQSKFNKSKVYASLIGSSDELP 517
Query: 510 AENNKKNDEDSDEDSEM---LLSQL 531
+ +D+ + M LL+QL
Sbjct: 518 KIDTADRTDDAVDSENMDNDLLNQL 542
>gi|297734632|emb|CBI16683.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 288/419 (68%), Positives = 346/419 (82%), Gaps = 3/419 (0%)
Query: 83 MDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLS 142
M+NP++GSASVLN WE G+ LTKWELCRVVKELRKF+R+K ALEVY+WMNNRGERFRLS
Sbjct: 1 MENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLS 60
Query: 143 ASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKM 202
+SDAAIQLDLIAKV GV+SAED+F LPDTLKD+R+YGALLNAYV+A+MR AE+LI+K+
Sbjct: 61 SSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKL 120
Query: 203 RDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST 262
R+KGYA LP+NVMMTLYM +KE D+V+SM+SEM K I+LD+YSYNIWLSSC S T
Sbjct: 121 RNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCES---T 177
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
E+ME VFE MK+++ +NPNWTTFSTMATMYIK+GQ EKAEE L++VESRIT RDR+PYHY
Sbjct: 178 ERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHY 237
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
L+SLYGS G K EVYR WN+Y+S FP + NLGYHA+ISSL R+GD+EG EKI+EEWLSVK
Sbjct: 238 LISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSVK 297
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
SSYDPRI NL++ YVKEG +KAE F + +IE GGKPNST+WE LAEG+ ++I +AL
Sbjct: 298 SSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDAL 357
Query: 443 SCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSL 501
SC K A AEG+ W+PKPVNV F CEEE+D +KEA + LLRQ GY + M L
Sbjct: 358 SCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGYEDDGAEMLL 416
>gi|147803609|emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/417 (64%), Positives = 328/417 (78%), Gaps = 14/417 (3%)
Query: 127 EVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAY 186
+VY+WMNNRGERFRLS+SDAAIQLDLIAKV GV+SAED+F LPDTLKD+R+YGALLNAY
Sbjct: 320 KVYEWMNNRGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAY 379
Query: 187 VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV 246
V+A+MR AE+LI+K+R+KGYA LP+NVMMTLYM +KE D+V+SM+SEM K I+LD+
Sbjct: 380 VQAKMRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDI 439
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
YSYNIWLSSC S TE+ME VFE MK+++ +NPNWTTFSTMATMYIK+GQ EKAEE L+
Sbjct: 440 YSYNIWLSSCES---TERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLK 496
Query: 307 RVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIG 366
+VESRIT RDR+PYHYL+SLYGS G K EVYR WN+Y+S FP + NLGYHA+ISSL R+G
Sbjct: 497 KVESRITNRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVG 556
Query: 367 DIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWE 426
D+EG EKI+EEWLSVKSSYDPRI NL++ YVKEG +KAE F + +IE GGKPNST+WE
Sbjct: 557 DLEGAEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWE 616
Query: 427 TLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVAL 486
LAEG+ ++I +ALSC K A AEG+ W+PKPVNV F CEEE+D +KEA + L
Sbjct: 617 ILAEGNTGVKKISDALSCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGL 676
Query: 487 LRQPGYRKEKDYMSLIGLTDEAVAENNKKNDED-----------SDEDSEMLLSQLQ 532
LRQ G +++ Y SL GL +V N N++D D+ +EMLL+Q Q
Sbjct: 677 LRQMGCLEDEPYASLFGLHTGSVTGNELSNEKDRTGADKDIDEDEDDGAEMLLNQFQ 733
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 73/79 (92%)
Query: 50 IKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWEL 109
I CS+SQIHSYGTVD+ERRP++KWNA++R++SLM+NP++GSASVLN WE G+ LTKWEL
Sbjct: 34 ITCSISQIHSYGTVDYERRPLVKWNAVYRRISLMENPEMGSASVLNQWENEGKRLTKWEL 93
Query: 110 CRVVKELRKFRRYKHALEV 128
CRVVKELRKF+R+K ALE+
Sbjct: 94 CRVVKELRKFKRFKMALEL 112
>gi|358344191|ref|XP_003636175.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355502110|gb|AES83313.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 790
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/427 (56%), Positives = 307/427 (71%), Gaps = 19/427 (4%)
Query: 109 LCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLS 168
L + K +H L+VYDWMNNR ERFR+SASD AIQLDLIA+VHGV+SAE FFL+
Sbjct: 278 LISATNDFMKVMTNEHVLQVYDWMNNRPERFRISASDVAIQLDLIARVHGVSSAESFFLN 337
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
L + LKD+R YGALLNAYV +R R AE L++ MR K Y HSLP+N+MMTL M +K+YD
Sbjct: 338 LTNDLKDKRTYGALLNAYVHSRSREKAESLLEVMRSKRYLTHSLPFNLMMTLSMNLKDYD 397
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+V+ +VSEMKEK I+LD+Y+YNIWLSSCGSQGS EKME VFE M D + PNW+TFSTM
Sbjct: 398 KVDMLVSEMKEKNIQLDIYTYNIWLSSCGSQGSIEKMEQVFEQMLKDPTIIPNWSTFSTM 457
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A MYIKM EKA+E L++ E RI GRD+VP+HYLLSLYGSVG K+EVYRVWN Y+S+FP
Sbjct: 458 AAMYIKMELFEKAQECLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFP 517
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ NLGYHA+ISS R+ DIE EK++EEW+SV+ S D RI NL++SWY+K+G DK +
Sbjct: 518 SIPNLGYHAVISSFVRMDDIERAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFS 577
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFF 468
FF + E GG PNST+WE L+EGHI E+R+ EALSCL+ AF +KSW+PK
Sbjct: 578 FFKHMSEGGGCPNSTTWELLSEGHIAEKRVSEALSCLEKAFMTSDSKSWKPK-------- 629
Query: 469 KACEEESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKNDEDS----DEDS 524
++ E + LLR+ GY ++ Y ++I DE + +D DS D+DS
Sbjct: 630 ------ANKNCAEVLIELLRKSGYHNDEAYAAIIS-KDEPSNRTERIDDVDSENMDDDDS 682
Query: 525 EMLLSQL 531
++L SQL
Sbjct: 683 QVLFSQL 689
>gi|242076656|ref|XP_002448264.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
gi|241939447|gb|EES12592.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
Length = 515
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 212/449 (47%), Positives = 312/449 (69%), Gaps = 1/449 (0%)
Query: 54 MSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVV 113
++++HSYG VD+ERRP ++W+ ++R++++ + L W++G R L KWELCR+
Sbjct: 60 VAKVHSYGAVDYERRPPLRWSTLYRRIAVGHGGR-PVGRTLGAWDEGERRLDKWELCRIA 118
Query: 114 KELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL 173
KELRKFRR+ AL+VYDWM R +RF LS+SD AIQLDLIAKV GV+ AE +F LPD +
Sbjct: 119 KELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEKYFDELPDAM 178
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD+R YG+LLN Y +A M+ E ++MR KG+A +LP NV+M Y+ E +EV ++
Sbjct: 179 KDKRTYGSLLNVYAQAMMKEKTEDTFEQMRKKGFASDTLPCNVLMNFYVDSGEPNEVLAI 238
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EMKE+ + DV +YNIW+ SC ++ E+ME VF M D++V NWTT++T+A+MYI
Sbjct: 239 IDEMKERNVSFDVCTYNIWIKSCAAKQDAEEMERVFSQMIADESVVANWTTYTTLASMYI 298
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K+G EKAEE L+ E R TGR++ +HYL++LY +GKKEEVYR+WN Y++ FP + NL
Sbjct: 299 KLGNSEKAEECLKDAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNL 358
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
GY ++S+L RIGDIEG E ++EEW S SS+DP+ N++++WY KEG KAE N
Sbjct: 359 GYQELLSALVRIGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAKEGLITKAEQTLNRF 418
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
+E+GG P +WE LA ++++ +I EALSC++ A A + A W+P+P NV + + +E
Sbjct: 419 VEKGGNPKPNTWEILATAYMKDDKISEALSCMEKATAIKSANKWKPRPTNVESLLASFKE 478
Query: 474 ESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
++D + V++L G ++++Y SLI
Sbjct: 479 KNDAEGADRLVSVLTSRGCAEDEEYKSLI 507
>gi|326493098|dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 211/457 (46%), Positives = 312/457 (68%), Gaps = 1/457 (0%)
Query: 54 MSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVV 113
++ +HSYGTVDFERRP ++W++++R++++ + L DW++G R L KWELCR+
Sbjct: 48 VANVHSYGTVDFERRPALRWSSLYRRVAVGHGGR-PVGRTLADWDEGERRLDKWELCRIA 106
Query: 114 KELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL 173
+ELRKFRR+ ALEVYDWM +R +RF LS+SD AIQLDLIAKV GV AE++F LPD L
Sbjct: 107 RELRKFRRFNLALEVYDWMTDRRDRFSLSSSDMAIQLDLIAKVRGVPDAEEYFEKLPDPL 166
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD+R YG+LLN Y +ARM+ E ++MR KG+A +LP+NV+M Y+ + E ++V ++
Sbjct: 167 KDKRTYGSLLNVYAQARMKEKTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTV 226
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
EMK++ I DV +YNIW+ C + + ME V M D++V NWTT++T+A+M+I
Sbjct: 227 TDEMKQRNISFDVCTYNIWIKCCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHI 286
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K+ EKAEE L+ E R TGRD+ +H+L++LY + KKEEVYR+WN Y++ F + NL
Sbjct: 287 KLENFEKAEECLKEAEKRATGRDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNL 346
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
GY ++S+L R+GDIEG E ++EEW S SS+DP+ N++++WY +EG KA+ N
Sbjct: 347 GYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRF 406
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
+E+GG P +WE LA ++++ ++ EALSCL+ A A + A WRP+P NV +E
Sbjct: 407 VEKGGNPKPNTWEILATAYLKDNQLSEALSCLEKATAVKSASKWRPRPTNVETLLAYFKE 466
Query: 474 ESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVA 510
++D S + +++LR G + ++Y SLI AVA
Sbjct: 467 KNDTESVDRLMSVLRSRGCAENEEYKSLIDTYALAVA 503
>gi|326498623|dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 210/457 (45%), Positives = 311/457 (68%), Gaps = 1/457 (0%)
Query: 54 MSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVV 113
++ +HSYGTVDFERRP ++W++++R++++ + L DW++G R L KWELCR+
Sbjct: 48 VANVHSYGTVDFERRPALRWSSLYRRVAVGHGGR-PVGRTLADWDEGERRLDKWELCRIA 106
Query: 114 KELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL 173
+ELRKFRR+ ALEVYDWM +R +RF LS+SD AIQLDLIAKV GV E++F LPD L
Sbjct: 107 RELRKFRRFNLALEVYDWMTDRRDRFSLSSSDMAIQLDLIAKVRGVPDTEEYFEKLPDPL 166
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD+R YG+LLN Y +ARM+ E ++MR KG+A +LP+NV+M Y+ + E ++V ++
Sbjct: 167 KDKRTYGSLLNVYAQARMKEKTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTV 226
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
EMK++ I DV +YNIW+ C + + ME V M D++V NWTT++T+A+M+I
Sbjct: 227 TDEMKQRNISFDVCTYNIWIKCCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHI 286
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K+ EKAEE L+ E R TGRD+ +H+L++LY + KKEEVYR+WN Y++ F + NL
Sbjct: 287 KLENFEKAEECLKEAEKRATGRDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNL 346
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
GY ++S+L R+GDIEG E ++EEW S SS+DP+ N++++WY +EG KA+ N
Sbjct: 347 GYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRF 406
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
+E+GG P +WE LA ++++ ++ EALSCL+ A A + A WRP+P NV +E
Sbjct: 407 VEKGGNPKPNTWEILATAYLKDNQLSEALSCLEKATAVKSASKWRPRPTNVETLLAYFKE 466
Query: 474 ESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVA 510
++D S + +++LR G + ++Y SLI AVA
Sbjct: 467 KNDTESVDRLMSVLRSRGCAENEEYKSLIDTYALAVA 503
>gi|293332912|ref|NP_001168310.1| hypothetical protein [Zea mays]
gi|223947377|gb|ACN27772.1| unknown [Zea mays]
gi|414586053|tpg|DAA36624.1| TPA: hypothetical protein ZEAMMB73_688721 [Zea mays]
Length = 513
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 211/449 (46%), Positives = 307/449 (68%), Gaps = 1/449 (0%)
Query: 54 MSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVV 113
++++HSYGTVD+ERR ++W ++R++++ + L W++G R L KWELCR+
Sbjct: 58 VAKVHSYGTVDYERRSPLRWGTLYRRIAVGHGGR-PVGRTLGAWDEGERRLDKWELCRIA 116
Query: 114 KELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL 173
KELRKFRR+ AL+VYDWM R +RF LS+SD AIQLDLIAKV GV AE +F LPD +
Sbjct: 117 KELRKFRRFNLALQVYDWMTERRDRFPLSSSDMAIQLDLIAKVRGVPHAEKYFDELPDAM 176
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD+R YG+LLN Y +A M+ E ++MR KG+A +LP NV+M Y+ E DEV ++
Sbjct: 177 KDKRTYGSLLNVYAQAMMKEKTEETFEQMRKKGFASDTLPCNVLMNFYVDSGEPDEVLAI 236
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EMKE+ + DV +YNIW+ SC ++ E+ME VF M D++V NWTT++T+A+MY+
Sbjct: 237 IDEMKERNVSFDVCTYNIWIKSCAAKQDAEEMEQVFSQMIADESVVANWTTYTTLASMYL 296
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K+G EKAEE L+ E R TGR++ +HYL++LY +GKKEEVYR+WN Y++ FP + NL
Sbjct: 297 KLGNSEKAEECLKDAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNL 356
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
GY ++S+L RIGDIEG E ++EEW S S+DP+ N++++WY KEG KAE N
Sbjct: 357 GYQELLSALIRIGDIEGAELLYEEWASKSYSFDPKTMNILLAWYAKEGLITKAEQTVNRF 416
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
+E+GG P +WE LA ++ + +I EALSC++ A A + A W+P+P NV + +E
Sbjct: 417 VEKGGNPKPNTWEILATAYMNDDKISEALSCMEKATAVKSASKWKPRPTNVETLLASFKE 476
Query: 474 ESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
++D + V++L G ++++Y SLI
Sbjct: 477 KNDAEGADRLVSVLTSRGCAEDEEYKSLI 505
>gi|357165075|ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Brachypodium distachyon]
Length = 513
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 207/450 (46%), Positives = 308/450 (68%), Gaps = 1/450 (0%)
Query: 54 MSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVV 113
++ +HSYGTVDFERR ++W++++R++++ + + L DW++G R L KWELCRV
Sbjct: 58 VANVHSYGTVDFERRKALRWSSLYRRIAV-GHGRRPVGRTLADWDEGERRLDKWELCRVA 116
Query: 114 KELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL 173
+ELRKFRR+ AL+VYDWM R +RF LS+SD AIQLDL+AKV GV AE++F SLPD L
Sbjct: 117 RELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLVAKVRGVPHAEEYFESLPDPL 176
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD+R YG+LLN Y +ARM+ E ++MR KGYA +LP+NV+M Y+ ++E +V ++
Sbjct: 177 KDKRTYGSLLNVYAQARMKEKTEDTFEQMRKKGYASDTLPFNVLMNFYVDVEEPQKVSAV 236
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
EMKE+ + DV +YNIW+ S + + M+ VF M D++V NWTT++T+A+M+I
Sbjct: 237 TDEMKERNVSFDVCTYNIWIKSFAAMKDADGMDRVFNQMIADESVVANWTTYTTLASMHI 296
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K+G EKAE L+ E R TGRD+ +H+L++LY + KKEEVYR+WN Y++ F + NL
Sbjct: 297 KLGNFEKAEVCLKEAEKRTTGRDKKCFHFLITLYSYLQKKEEVYRIWNWYKATFSTIHNL 356
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
GY ++S+L R+GDIEG E ++EEW S SS+DP+ N++++WY +EG KAE N
Sbjct: 357 GYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYSREGFVVKAEQTLNRF 416
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
+E+GG P +WE LA ++++ ++ EALSC++ A A + A WRP+P NV + +E
Sbjct: 417 VEKGGNPKPNTWEILASAYLKDNQLSEALSCMEKAAAVKSASRWRPRPSNVESLLAYFKE 476
Query: 474 ESDMGSKEAFVALLRQPGYRKEKDYMSLIG 503
+D S + + +L G + ++Y SLI
Sbjct: 477 NNDTDSADRLMGVLTSRGCAENEEYKSLIN 506
>gi|32488964|emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa Japonica Group]
Length = 511
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 205/449 (45%), Positives = 305/449 (67%), Gaps = 1/449 (0%)
Query: 54 MSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVV 113
++++HSYG +D+ERR ++W++++R++++ + L W++G R L KWELCR+
Sbjct: 56 VAKVHSYGALDYERRAALRWSSLYRRIAVGHGGR-PVGRTLGAWDEGERRLDKWELCRIA 114
Query: 114 KELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL 173
+ELRKFRR+ AL+VYDWM R +RF LS+SD AIQLDLIAKV GV+ AE++F LPD L
Sbjct: 115 RELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPL 174
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD+R YG+LLN Y +A M+ E ++MR KG+A +LP+NV+M Y+ +E ++V +
Sbjct: 175 KDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSIL 234
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EM E+ + DV +YNIW+ SC + + ME VF M D+ V NWTT++T+A+M+I
Sbjct: 235 IDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHI 294
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K+G EKAEESL+ E R TGR++ +HYL++LY +GKKEEVYRVWN Y++ FP + NL
Sbjct: 295 KLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNL 354
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
GY ++S+L R+GDIEG E ++EEW S SS+DP+ N++++WY +EG KAE N
Sbjct: 355 GYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRF 414
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
+E+GG P +WE L ++++ + EALSCL+ A A WRP+P NV + +E
Sbjct: 415 VEKGGNPKPNTWEILGTAYLKDGQSSEALSCLEKATAVASPSKWRPRPTNVESLLANFKE 474
Query: 474 ESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
++D S + + +LR + ++Y SLI
Sbjct: 475 KNDAESADRLMNVLRSRRCEENEEYKSLI 503
>gi|125549215|gb|EAY95037.1| hypothetical protein OsI_16851 [Oryza sativa Indica Group]
Length = 511
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/449 (45%), Positives = 305/449 (67%), Gaps = 1/449 (0%)
Query: 54 MSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVV 113
++++HSYG +D+ERR ++W++++R++++ + L W++G R L KWELCR+
Sbjct: 56 VAKVHSYGALDYERRAALRWSSLYRRIAVGHGGR-PVGRTLGAWDEGERRLDKWELCRIA 114
Query: 114 KELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL 173
+ELRKFRR+ AL+VYDWM R +RF LS+SD AIQLDLIAKV GV+ AE++F LPD L
Sbjct: 115 RELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPL 174
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD+R YG+LLN Y +A M+ E ++MR KG+A +LP+NV+M Y+ +E ++V +
Sbjct: 175 KDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSIL 234
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EM E+ + DV +YNIW+ SC + + ME VF M D+ V NWTT++T+A+M+I
Sbjct: 235 IDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHI 294
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K+G EKAEESL+ E R TGR++ +HYL++LY +GKKEEVYRVWN Y++ FP + NL
Sbjct: 295 KLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNL 354
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
GY ++S+L R+GDIEG E ++EEW S SS+DP+ N++++WY +EG KAE N
Sbjct: 355 GYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRF 414
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
+E+GG P +WE L ++++ + EALSCL+ A A WRP+P NV + +E
Sbjct: 415 VEKGGNPKPNTWEILGTAYLKDGQSSEALSCLEKATAVASPSKWRPRPTNVESLLANFKE 474
Query: 474 ESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
++D S + + +LR + ++Y SLI
Sbjct: 475 KNDAESADRLMNVLRSRRCEENEEYKSLI 503
>gi|297603118|ref|NP_001053460.2| Os04g0544400 [Oryza sativa Japonica Group]
gi|255675659|dbj|BAF15374.2| Os04g0544400 [Oryza sativa Japonica Group]
Length = 571
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 201/435 (46%), Positives = 298/435 (68%), Gaps = 1/435 (0%)
Query: 54 MSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVV 113
++++HSYG +D+ERR ++W++++R++++ + L W++G R L KWELCR+
Sbjct: 56 VAKVHSYGALDYERRAALRWSSLYRRIAVGHGGR-PVGRTLGAWDEGERRLDKWELCRIA 114
Query: 114 KELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL 173
+ELRKFRR+ AL+VYDWM R +RF LS+SD AIQLDLIAKV GV+ AE++F LPD L
Sbjct: 115 RELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPL 174
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD+R YG+LLN Y +A M+ E ++MR KG+A +LP+NV+M Y+ +E ++V +
Sbjct: 175 KDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSIL 234
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EM E+ + DV +YNIW+ SC + + ME VF M D+ V NWTT++T+A+M+I
Sbjct: 235 IDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHI 294
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K+G EKAEESL+ E R TGR++ +HYL++LY +GKKEEVYRVWN Y++ FP + NL
Sbjct: 295 KLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNL 354
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
GY ++S+L R+GDIEG E ++EEW S SS+DP+ N++++WY +EG KAE N
Sbjct: 355 GYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRF 414
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
+E+GG P +WE L ++++ + EALSCL+ A A WRP+P NV + +E
Sbjct: 415 VEKGGNPKPNTWEILGTAYLKDGQSSEALSCLEKATAVASPSKWRPRPTNVESLLANFKE 474
Query: 474 ESDMGSKEAFVALLR 488
++D S + + +LR
Sbjct: 475 KNDAESADRLMNVLR 489
>gi|218195308|gb|EEC77735.1| hypothetical protein OsI_16848 [Oryza sativa Indica Group]
Length = 1300
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/439 (46%), Positives = 298/439 (67%), Gaps = 5/439 (1%)
Query: 54 MSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVV 113
++++HSYG +D+ERR ++W++++R++++ + L W++G R L KWELCR+
Sbjct: 56 VAKVHSYGALDYERRAALRWSSLYRRIAVGHGGRP-VGRTLGAWDEGERRLDKWELCRIA 114
Query: 114 KELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL 173
+ELRKFRR+ AL+VYDWM R +RF LS+SD AIQLDLIAKV GV+ AE++F LPD L
Sbjct: 115 RELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPL 174
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD+R YG+LLN Y +A M+ E ++MR KG+A +LP+NV+M Y+ +E ++V +
Sbjct: 175 KDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSIL 234
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EM E+ + DV +YNIW+ SC + + ME VF M D+ V NWTT++T+A+M+I
Sbjct: 235 IDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHI 294
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K+G EKAEESL+ E R TGR++ +HYL++LY +GKKEEVYRVWN Y++ FP + NL
Sbjct: 295 KLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNL 354
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
GY ++S+L R+GDIEG E ++EEW S SS+DP+ N++++WY +EG KAE N
Sbjct: 355 GYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRF 414
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
+E+GG P +WE L ++++ + EALSCL+ A A WRP+P NV + +E
Sbjct: 415 VEKGGNPKPNTWEILGTAYLKDGQSSEALSCLEKATAVASPSKWRPRPTNVESLLANFKE 474
Query: 474 ESDMGSKEAFVALLRQPGY 492
++D S + L PG+
Sbjct: 475 KNDAESADR----LMNPGF 489
>gi|125591164|gb|EAZ31514.1| hypothetical protein OsJ_15655 [Oryza sativa Japonica Group]
Length = 531
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/469 (41%), Positives = 293/469 (62%), Gaps = 21/469 (4%)
Query: 54 MSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVV 113
++++HSYG +D+ERR ++W++++R++++ + L W++G R L KW
Sbjct: 56 VAKVHSYGALDYERRAALRWSSLYRRIAVGHGGR-PVGRTLGAWDEGERRLDKWSSAASR 114
Query: 114 KE--------------------LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
+ F + A +VYDWM R +RF LS+SD AIQLDLI
Sbjct: 115 GSCASSAASTSGSRSSYSRMMFVISFHTHSLAKDVYDWMTERRDRFSLSSSDMAIQLDLI 174
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
AKV GV+ AE++F LPD LKD+R YG+LLN Y +A M+ E ++MR KG+A +LP
Sbjct: 175 AKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLP 234
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+NV+M Y+ +E ++V ++ EM E+ + DV +YNIW+ SC + + ME VF M
Sbjct: 235 FNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMI 294
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D+ V NWTT++T+A+M+IK+G EKAEESL+ E R TGR++ +HYL++LY +GKK
Sbjct: 295 RDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYSHLGKK 354
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
EEVYRVWN Y++ FP + NLGY ++S+L R+GDIEG E ++EEW S SS+DP+ N++
Sbjct: 355 EEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNIL 414
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG 453
++WY +EG KAE N +E+GG P +WE L ++++ + EALSCL+ A A
Sbjct: 415 LAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLKDGQSSEALSCLEKATAVAS 474
Query: 454 AKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
WRP+P NV + +E++D S + + +LR + ++Y SLI
Sbjct: 475 PSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRSRRCEENEEYKSLI 523
>gi|148909871|gb|ABR18022.1| unknown [Picea sitchensis]
Length = 561
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/465 (36%), Positives = 291/465 (62%), Gaps = 13/465 (2%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++R++S + +P+ + L W GR + KW L +V+ELRK+ R+KHALEV++WM+
Sbjct: 96 LYRRISRLGDPKRSAVEELERWITEGREVKKWVLREIVRELRKYYRHKHALEVFEWMS-- 153
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
++F S D A+ L LIAKVHG+ASAE +++ L K+ Y ALLN YV+ + +
Sbjct: 154 -KKFPCSVGDRAMHLGLIAKVHGIASAEKYYVDLHHYEKNHLTYFALLNCYVQEKNIEKS 212
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
E ++++++D G+ + PY MMTLYM +++++V ++ EMK+KGI LD++ YNIW+ S
Sbjct: 213 EAIMEELKDLGFIKTAFPYTEMMTLYMNTEQFEKVPLVIQEMKKKGISLDIHCYNIWMRS 272
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI--- 312
+ +++ VF ++ D +N +W+ +ST+A +YI ++KA +L+ +E+++
Sbjct: 273 YAALSDMDQVAEVFNEIERDDNINTDWSIYSTLANIYINAKVLDKAGSALKEMENKMKEI 332
Query: 313 -TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
T +D++ Y++L+SL+G +G K+EVYR+W + FP +TN Y ++SSL +GDIEG
Sbjct: 333 ETKKDQLAYNHLISLHGRLGNKDEVYRIWQSFELAFPKMTNRSYVCLLSSLVGMGDIEGA 392
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
E ++W S+K+ D RI +++ Y+++G KAE ++++GGKPN+ +WETLAEG
Sbjct: 393 EVFIKKWESMKTFDDSRIYYALLNAYIEKGWLQKAELLLERVVDKGGKPNAKTWETLAEG 452
Query: 432 HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPG 491
+I+ +I +A+ +K + + EG W+PK VNV+ K E++ D+ S E F +LR
Sbjct: 453 YIQNEQIHKAMEAMKRSLSIEGNSPWQPKSVNVLALLKHFEKQGDVKSAEEFFKILRGVK 512
Query: 492 YRKEKDYMSL------IGLTDEAVAENNKKNDEDSDEDSEMLLSQ 530
+ + Y SL +G ++E +++ DE+++ LL Q
Sbjct: 513 FVSTEIYNSLLRTYVYVGKVPPRISELMLEDNVSPDEETDNLLKQ 557
>gi|298571986|gb|ADI87990.1| PPR protein [Silene latifolia]
Length = 224
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 188/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE+L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572014|gb|ADI88004.1| PPR protein [Silene latifolia]
gi|298572038|gb|ADI88016.1| PPR protein [Silene latifolia]
Length = 224
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 188/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE+L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572048|gb|ADI88021.1| PPR protein [Silene latifolia]
Length = 224
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 153/224 (68%), Positives = 186/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
EVE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF M +D + PNWTTFSTM
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572960|gb|ADI88477.1| PPR protein [Silene vulgaris]
Length = 224
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 151/224 (67%), Positives = 187/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I+LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYL+SLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 AAMYSKLGQLEKAEQCLRNLETRITNRDRMPYHYLISLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298571978|gb|ADI87986.1| PPR protein [Silene latifolia]
gi|298571980|gb|ADI87987.1| PPR protein [Silene latifolia]
gi|298571982|gb|ADI87988.1| PPR protein [Silene latifolia]
gi|298571990|gb|ADI87992.1| PPR protein [Silene latifolia]
gi|298571994|gb|ADI87994.1| PPR protein [Silene latifolia]
gi|298571996|gb|ADI87995.1| PPR protein [Silene latifolia]
gi|298571998|gb|ADI87996.1| PPR protein [Silene latifolia]
gi|298572002|gb|ADI87998.1| PPR protein [Silene latifolia]
gi|298572020|gb|ADI88007.1| PPR protein [Silene latifolia]
gi|298572022|gb|ADI88008.1| PPR protein [Silene latifolia]
Length = 224
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 187/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572050|gb|ADI88022.1| PPR protein [Silene latifolia]
Length = 224
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/224 (68%), Positives = 186/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
EVE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF M +D + PNWTTFSTM
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572024|gb|ADI88009.1| PPR protein [Silene latifolia]
gi|298572032|gb|ADI88013.1| PPR protein [Silene latifolia]
gi|298572044|gb|ADI88019.1| PPR protein [Silene latifolia]
gi|298572056|gb|ADI88025.1| PPR protein [Silene latifolia]
Length = 224
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 187/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572058|gb|ADI88026.1| PPR protein [Silene latifolia]
Length = 224
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 187/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE+L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298571984|gb|ADI87989.1| PPR protein [Silene latifolia]
Length = 224
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 187/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEDLVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572008|gb|ADI88001.1| PPR protein [Silene latifolia]
gi|298572012|gb|ADI88003.1| PPR protein [Silene latifolia]
gi|298572028|gb|ADI88011.1| PPR protein [Silene latifolia]
gi|298572052|gb|ADI88023.1| PPR protein [Silene latifolia]
Length = 224
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 187/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572030|gb|ADI88012.1| PPR protein [Silene latifolia]
Length = 224
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 187/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE+L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
EVE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF M +D + PNWTTFSTM
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+G++EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298571976|gb|ADI87985.1| PPR protein [Silene latifolia]
gi|298571992|gb|ADI87993.1| PPR protein [Silene latifolia]
gi|298572000|gb|ADI87997.1| PPR protein [Silene latifolia]
gi|298572064|gb|ADI88029.1| PPR protein [Silene latifolia]
Length = 224
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 186/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572066|gb|ADI88030.1| PPR protein [Silene latifolia]
Length = 224
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 151/224 (67%), Positives = 187/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ++KAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLDKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572010|gb|ADI88002.1| PPR protein [Silene latifolia]
gi|298572034|gb|ADI88014.1| PPR protein [Silene latifolia]
gi|298572054|gb|ADI88024.1| PPR protein [Silene latifolia]
Length = 224
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 186/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572036|gb|ADI88015.1| PPR protein [Silene latifolia]
Length = 224
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 186/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572026|gb|ADI88010.1| PPR protein [Silene latifolia]
gi|298572046|gb|ADI88020.1| PPR protein [Silene latifolia]
Length = 224
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 151/224 (67%), Positives = 187/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+G++EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298571988|gb|ADI87991.1| PPR protein [Silene latifolia]
Length = 224
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 186/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572004|gb|ADI87999.1| PPR protein [Silene latifolia]
gi|298572006|gb|ADI88000.1| PPR protein [Silene latifolia]
Length = 224
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 186/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572060|gb|ADI88027.1| PPR protein [Silene latifolia]
Length = 224
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 151/224 (67%), Positives = 187/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+G++EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGKLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572062|gb|ADI88028.1| PPR protein [Silene latifolia]
Length = 224
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 151/224 (67%), Positives = 186/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GS GS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572040|gb|ADI88017.1| PPR protein [Silene latifolia]
Length = 224
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 151/224 (67%), Positives = 186/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVF
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFT 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572018|gb|ADI88006.1| PPR protein [Silene latifolia]
Length = 224
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 151/224 (67%), Positives = 185/224 (82%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GS GS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572016|gb|ADI88005.1| PPR protein [Silene latifolia]
Length = 224
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/224 (67%), Positives = 185/224 (82%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAY A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K GQ+EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVFP
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572042|gb|ADI88018.1| PPR protein [Silene latifolia]
Length = 224
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/224 (66%), Positives = 186/224 (83%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDTLKD R+YGALLNAYV A++R AE L+++MR+KGY + LPYNVMMTLYMK+ E D
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+VE +VSEMK+K I LD YSYNIWLS+ GSQGS E ME VF+ M +D + PNWTTFSTM
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
A+MY K+G++EKAE+ LR +E+RIT RDR+PYHYLLSLYGS+G + EVYRVWN+Y+SVF
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFT 180
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ N GYH++ISSL R GDIEG EK++EEWL VKSS+DP+I NL
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|357151797|ref|XP_003575907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/426 (38%), Positives = 254/426 (59%), Gaps = 7/426 (1%)
Query: 78 RKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGE 137
R L LM P+ + VL W + GR++ K++L RVV+ELRK+RR+KHALE+ +WM + E
Sbjct: 35 RLLKLM-YPKRSAVVVLRRWTEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMRTQPE 93
Query: 138 RFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAEL 197
+L D A+ LDL+AKV G+ASAE FF +P+ K ALL+AYV+ +R AE
Sbjct: 94 -MKLLPGDHAVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNALLHAYVQNGVRDKAEA 152
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
++ +M D GY +LP+N MM++YM E ++V M+ E++ I D+ +YNIWL+ C
Sbjct: 153 MLREMADAGYLTCALPFNHMMSMYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLTYCS 211
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+ S + E VF+LMK DK V P+W TFS MA++YI G K ++L +E R + ++R
Sbjct: 212 RKNSVKTAEKVFDLMKDDK-VFPDWMTFSLMASIYINAGLHVKGRDALVEMEKRASRKER 270
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y LL+LY S+ + + RVW+ R +F ++ Y M++SL R GDI E ++ E
Sbjct: 271 TAYSSLLTLYASLSDRGNLDRVWSKMREIFRKFSDTEYKCMLTSLTRFGDITAAESVYSE 330
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI-RER 436
W S + D RI N ++S+++K G + AE+F I+++G KP+ ++WE G++ +
Sbjct: 331 WESESGTRDSRIPNTILSFHIKNGKMEMAESFLQHIMQKGVKPSYSTWELFVWGYLGNDE 390
Query: 437 RILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEK 496
RI + L CLK A ++ W P P V F E+ D+ + E + +LR GY +
Sbjct: 391 RIDKILECLKKALSS--LDKWEPNPQLVAALFSLIEKRGDIEAAEELLVVLRGAGYVTTE 448
Query: 497 DYMSLI 502
Y S++
Sbjct: 449 IYNSVL 454
>gi|108862755|gb|ABA99305.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215704853|dbj|BAG94881.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712260|dbj|BAG94387.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 514
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 252/429 (58%), Gaps = 5/429 (1%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ + R+L + P+ +A VL W + GR++ K++L RVV+ELRK+RR+KHALE+ +WM
Sbjct: 43 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 102
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+ E RL D A+ LDL+AKV G+ SAE FF +P+ K ALL+AYV+ R
Sbjct: 103 TQPE-MRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRD 161
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE ++++M GY +LP+N MM+LYM E ++V M+ E++ I D+ +YNIWL
Sbjct: 162 KAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWL 220
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+ C + S + E V++LMK D+ V P+W TFS + ++YI G K ++L +E R +
Sbjct: 221 TYCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRAS 279
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
++R Y LL+LY S+ + + RVW R F ++ Y M++SL R GDI E
Sbjct: 280 RKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAES 339
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
+ EW S + D RI N ++++Y+K G +KAE F + I+++G KP+ ++WE G++
Sbjct: 340 FYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYL 399
Query: 434 RERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYR 493
+ R+ + L CLK A + + W P P + EE+ D+ + E + + R+ GY
Sbjct: 400 SDGRMDKVLECLKKALSC--LEKWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYV 457
Query: 494 KEKDYMSLI 502
+ Y S++
Sbjct: 458 TTEIYNSVL 466
>gi|326505170|dbj|BAK02972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 158/420 (37%), Positives = 252/420 (60%), Gaps = 6/420 (1%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ + ++L + P+ + VL W + GR++ K++L RVV+ELRK+RR+KHALE+ +WM
Sbjct: 38 DTLGKRLLKLIYPKRSAVVVLRRWAEEGRAVHKYQLNRVVRELRKYRRFKHALEICEWMR 97
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+ E RL D A+ LDL+AKV G+ASAE FF +P+ K +LL+AYV+ R
Sbjct: 98 TQPE-IRLLPGDHAVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNSLLHAYVQHGARD 156
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE ++ +M D GY +LP+N MM+LYM + E ++V M+ E++ I D+ +YNIWL
Sbjct: 157 KAEAMLKEMADAGYLTCALPFNHMMSLYMSVGELEKVPEMIKELRRYTIP-DLVTYNIWL 215
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+ C + S + E VF+LMK D+ V P+W TFS +A++YI G K ++L +E R +
Sbjct: 216 TYCSRKNSVKSAEKVFDLMKDDRVV-PDWMTFSLLASIYINAGLHVKGRDALVEMEKRAS 274
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
++R Y LL++Y S+ + + RVW+ R F ++ Y M++SL R GDI E
Sbjct: 275 RKERAAYSSLLTMYASLSDRGNLDRVWSKMRQTFRKFSDAEYKCMLTSLTRFGDIAAAEF 334
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
++ EW S + D RI N ++S+Y+K G +KAE+F I+++G KP+ ++WE G++
Sbjct: 335 VYGEWESQSGTKDSRIPNTILSFYIKNGEMEKAESFLQYIVQKGVKPSYSTWELFVWGYL 394
Query: 434 -RERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+ R + + CLK A ++ + W P P V F E++ D+ + E + +LR GY
Sbjct: 395 GNDERTDKVMECLKKALSS--LEKWEPNPQLVAALFSQIEKKGDIEAAEELLVVLRGAGY 452
>gi|225446335|ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 156/397 (39%), Positives = 250/397 (62%), Gaps = 5/397 (1%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
L W K GRS+ + +L R++++LR F+RY HALE+Y+W+ ++ F +S D AIQLDLI
Sbjct: 55 LEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIRDKF-YFDISPGDVAIQLDLI 113
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
+KVHG+ AE +F P++L+ +VYGALLN Y + + AE ++ +MRD G+ V +L
Sbjct: 114 SKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGF-VKTLS 172
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YNVM+ LY ++ +++++++++ EM+E GI LD ++Y I L++ + E ME + ++
Sbjct: 173 YNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLE 232
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR-VPYHYLLSLYGSVGK 332
D AVN +W + A Y+K EKA E L++ E I+GR R Y LL+LY ++G
Sbjct: 233 TDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGN 292
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
K EVYR+WNLY+++ N GY AM+SSL ++ D++G EK FEEWLS +D R+ NL
Sbjct: 293 KTEVYRIWNLYKTI-GKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNL 351
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAE 452
++ Y K+G +KAE + IE+G +P + +W+ LA G+ ++ +A+ LK A A
Sbjct: 352 LIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLAT 411
Query: 453 GAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
++ W+P PV + + + + D+ E + LLR+
Sbjct: 412 -SQGWKPNPVTLSACLEYLKGKGDVEEAENLIRLLRE 447
>gi|147775992|emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/397 (39%), Positives = 249/397 (62%), Gaps = 5/397 (1%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
L W K GRS+ + +L R++++LR F+RY HALE+Y+W+ ++ F +S D AIQLDLI
Sbjct: 55 LEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIRDKF-YFDISPGDVAIQLDLI 113
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
+KVHG+ AE +F P++L+ +VYGALLN Y + + AE ++ +MRD G+ V +L
Sbjct: 114 SKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGF-VKTLS 172
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YNVM+ LY ++ +++++++++ EM+E GI LD ++Y I L++ + E ME + ++
Sbjct: 173 YNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLE 232
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR-VPYHYLLSLYGSVGK 332
D AVN +W + A Y+K EKA E L++ E I+GR R Y LL+LY ++G
Sbjct: 233 TDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGN 292
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
K E YR+WNLY+++ N GY AM+SSL ++ D++G EK FEEWLS +D R+ NL
Sbjct: 293 KTEXYRIWNLYKTI-GKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNL 351
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAE 452
++ Y K+G +KAE + IE+G +P + +W+ LA G+ ++ +A+ LK A A
Sbjct: 352 LIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLA- 410
Query: 453 GAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
++ W+P PV + + + + D+ E + LLR+
Sbjct: 411 TSQGWKPNPVTLSACLEYLKGKXDVEEAENLIRLLRE 447
>gi|224085447|ref|XP_002307578.1| predicted protein [Populus trichocarpa]
gi|222857027|gb|EEE94574.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/438 (35%), Positives = 264/438 (60%), Gaps = 11/438 (2%)
Query: 97 WEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKV 156
W++ G ++ K+EL R+V+ELRK +RYKHALEV +WM + + +L D A+ LDLIAK+
Sbjct: 63 WKEEGHNVRKYELNRIVRELRKLKRYKHALEVCEWMTKQSD-IKLVPGDYAVHLDLIAKI 121
Query: 157 HGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
G+ SAE FF +PD ++D + ALL+ YV+ + AE L++KM + G+ ++LPYN
Sbjct: 122 RGLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSISKAEALMEKMSECGFLKNALPYNH 181
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
M+++Y+ + ++V ++ E+K+K DV +YN+WL++C SQ E E VF +K K
Sbjct: 182 MLSVYVANGQLEKVAEIIQELKKK-TSPDVVTYNMWLTACASQNDVETAEKVFMELKKSK 240
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
++P+W T+ST+ +YIK +EKA +L+ VE R + ++RV Y LLSL+ ++ K+ +
Sbjct: 241 -LDPDWVTYSTLTNLYIKKECLEKAAYTLKEVEKRASKKNRVTYSSLLSLHANMKDKDGL 299
Query: 337 YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
+R WN +SVF + + Y+ MISSL ++G+ G E ++ EW SV ++ D R++N++++
Sbjct: 300 HRTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGAENLYNEWESVSATRDSRVSNIVLAS 359
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS 456
Y+ + AE F ++++G P T+WE L GH++ ++ + L K A + +
Sbjct: 360 YINRNQMEDAENFCQRMVQKGITPCYTTWELLTCGHLKTEQMEKVLENFKKALCS--VRK 417
Query: 457 WRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEA------VA 510
W P + + FK EE D+ E + +LR G+ Y SL+ +A +
Sbjct: 418 WTPDKRLIGDIFKNLEERGDIEGAEKLLVILRDAGHVSTMIYNSLLRTYAKAGKMPVIIE 477
Query: 511 ENNKKNDEDSDEDSEMLL 528
E +K++ + D+++ L+
Sbjct: 478 ERMQKDNVELDDETHKLI 495
>gi|297737393|emb|CBI26594.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 273/464 (58%), Gaps = 13/464 (2%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ + R+L + + + + W + G ++ K+EL R+V+ELRK +RYKHALE+ +WM
Sbjct: 56 DTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMT 115
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+ + +L A D A+ LDLIAK+ G+ASAE FF L D +K + ALL+ YV+ ++
Sbjct: 116 KQHD-IKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSE 174
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE L++KM + G+ LPYN M++LY+ + ++V M+ E+K K DV +YN+WL
Sbjct: 175 KAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLWL 233
Query: 254 SSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+ C SQ E E V L+++ KA ++P+W T+S++ +YIK G ++KA +L +E R
Sbjct: 234 TVCASQNDVETAEKV--LLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRT 291
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
+ + R+ Y L+SL+ ++ K+ V+R+W +S+F + + Y MISSL ++G+ E E
Sbjct: 292 SRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAE 351
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
++ EW SV + D R+ N++++ Y+ + + AE F+N ++E G P+ T+WE L G+
Sbjct: 352 NLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGY 411
Query: 433 IRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
++++++ + L + A + K W P V +K EE+ ++ E + +LR+ G+
Sbjct: 412 LKKKQMEKVLDYFEKAVGS--VKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGH 469
Query: 493 RKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLLSQ 530
+ Y L+ G VAE KK+ + DE++ L+ +
Sbjct: 470 VSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKE 513
>gi|359490027|ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/444 (34%), Positives = 265/444 (59%), Gaps = 13/444 (2%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
+ W + G ++ K+EL R+V+ELRK +RYKHALE+ +WM + + +L A D A+ LDLI
Sbjct: 189 IQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHD-IKLLAGDYAVHLDLI 247
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
AK+ G+ASAE FF L D +K + ALL+ YV+ ++ AE L++KM + G+ LP
Sbjct: 248 AKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLP 307
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN M++LY+ + ++V M+ E+K K DV +YN+WL+ C SQ E E V L++
Sbjct: 308 YNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLWLTVCASQNDVETAEKV--LLE 364
Query: 274 VDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
+ KA ++P+W T+S++ +YIK G ++KA +L +E R + + R+ Y L+SL+ ++
Sbjct: 365 IKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQD 424
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
K+ V+R+W +S+F + + Y MISSL ++G+ E E ++ EW SV + D R+ N+
Sbjct: 425 KDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNI 484
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAE 452
+++ Y+ + + AE F+N ++E G P+ T+WE L G+++++++ + L + A +
Sbjct: 485 LLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGS- 543
Query: 453 GAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI------GLTD 506
K W P V +K EE+ ++ E + +LR+ G+ + Y L+ G
Sbjct: 544 -VKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMP 602
Query: 507 EAVAENNKKNDEDSDEDSEMLLSQ 530
VAE KK+ + DE++ L+ +
Sbjct: 603 LIVAEWMKKDKVEMDEETHRLIKE 626
>gi|255559466|ref|XP_002520753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540138|gb|EEF41715.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 255/441 (57%), Gaps = 11/441 (2%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
+ W+ G + K++L R+V+ELRK +RYKHALEV +WM E +L D A+ LDL+
Sbjct: 56 IRKWKTEGHKVQKYQLNRIVRELRKMKRYKHALEVCEWMTQERE-LKLLPGDYAVHLDLV 114
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
AKV G+ SAE FF LPD ++ + ALL+ YV+ + AE L++KMRD + + LP
Sbjct: 115 AKVRGLTSAEKFFEDLPDEMRGWQTCTALLHTYVKCKDVVKAEALMEKMRDCSFVKNPLP 174
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN M++LY+ E+D+ + +V E+K K DV ++N+WLS C S E + V
Sbjct: 175 YNHMISLYIADGEFDKAKRIVEELK-KSTTPDVVTFNLWLSMCASLNDVESAKKVLL-EL 232
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ +W T+ST+ +Y+K +E A +L+ +E R + ++R+ Y LLSLY ++G K
Sbjct: 233 KKLKIEADWITYSTLTNLYLKNKLLEDAVSTLKEMEKRASRKNRLAYSSLLSLYTNMGDK 292
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+ V+R+WN +S+F + + Y M+SSL ++ +IE E ++ EW SV + DP++AN++
Sbjct: 293 DAVHRIWNKMKSLFCKMNDAEYTCMLSSLIKLEEIEKAENLYTEWESVSGTGDPQVANIL 352
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG 453
++ Y+ + +E F+ ++E+G P T+WE L GH++ +++ + L C K A
Sbjct: 353 LAAYINRNQIEDSENFYRRMVEKGVCPCYTTWELLTWGHLKTKQMEKVLDCFKKAITI-- 410
Query: 454 AKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEA----- 508
K+W P V FK EE+ + E F+ +LR GY + Y SL+ +A
Sbjct: 411 VKTWSPDKRLVREVFKILEEKGNAEGAEEFLVMLRNAGYVSTEIYNSLLRTYAKAGKMPL 470
Query: 509 -VAENNKKNDEDSDEDSEMLL 528
V E KK+ + DE++ L+
Sbjct: 471 IVTERMKKDGVELDEETHRLI 491
>gi|255553771|ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542908|gb|EEF44444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 250/417 (59%), Gaps = 4/417 (0%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ ++ ++S P + +L W + G + K EL + VK+LRK+RR+ HAL+V +WM
Sbjct: 39 DTLYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHALQVSEWMT 98
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
++ + L D A++LDLI+KVHG+ AE++F S+PDT +DR+VYGALLN +++ G
Sbjct: 99 DK-KGCSLLPGDVAVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCAHSKLLG 157
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE + KM+D G+ +SL YNVM++LY + Y++++ +V EM+E GI D +Y I L
Sbjct: 158 KAEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRL 217
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
++C + E ME + M+VD ++ + + A Y+K G V+K L+R E I+
Sbjct: 218 NACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLIS 277
Query: 314 GRD-RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
G R Y +LL+LY + G K EVYR+WN Y+ + N GY MISSL ++ DI+G E
Sbjct: 278 GNTRRFAYEFLLTLYTASGNKAEVYRIWNKYKEI-GRFFNSGYICMISSLLKLDDIDGAE 336
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+IFEEW S K +D RI N M++ Y ++G+ +KAE + N I+ G +P++TSW LA G+
Sbjct: 337 RIFEEWDSKKVLFDIRIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGY 396
Query: 433 IRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
++ +A+ ++ A + W+P + + + + + D + E + + ++
Sbjct: 397 HSSGQMTKAVETIRKAISV-SKPGWKPSLLTLSACLEFLKGQGDAETLEELLKIAKE 452
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 155/463 (33%), Positives = 268/463 (57%), Gaps = 9/463 (1%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
N +F ++S + P + VL++W + G+ + +EL +++++LR RRY AL+V +WMN
Sbjct: 35 NTLFARISPLGEPDISLVPVLDNWVQEGKKIRGFELQKIIRDLRCHRRYTQALQVSEWMN 94
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+G+ S +D A+QLDLI +V G+ SAE +F +L + ++ + YGALLN YVR +
Sbjct: 95 GKGQS-GFSPADHAVQLDLIGRVRGLESAESYFQNLVNQDRNDKTYGALLNCYVREGLVD 153
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
+ + KM++ G+A L YN +M LY + + ++V ++SEMKE GI D++SY I +
Sbjct: 154 KSLYHMQKMKELGFASSPLNYNDLMCLYTRTGQLEKVTDVLSEMKENGITPDLFSYRICM 213
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
SSC ++ + +E + E M+ ++ +W T+ST+A++Y+K EKA L++ E ++
Sbjct: 214 SSCAARSDLKGVEEILEEMENQSHISIDWVTYSTVASIYVKASLKEKALIYLKKCEQKVN 273
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
RD + Y++L+SL S+G K+EV R+W L ++ N Y M+ +L ++ ++E +K
Sbjct: 274 -RDALGYNHLISLNASLGIKDEVMRLWGLVKTKCKKQVNRDYITMLGALVKLEELEEADK 332
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
+ +EW S YD R+ N+++ Y ++G +KAEA I+++ P SW +A G++
Sbjct: 333 LLQEWESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKDIVKKQKNPTPNSWAIIAAGYV 392
Query: 434 RERRILEALSCLKGAFAAEGA-KSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
++ + +A +C+K A + K WRPK + + E D+ EAFV LL
Sbjct: 393 NKQNMEKAFNCMKEALTVQAENKGWRPKANLISSILSWLGENGDVEDVEAFVNLLETKVP 452
Query: 493 RKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLLS 529
+ + Y +LI G + V EN N D DE+++ +LS
Sbjct: 453 KDREIYHTLIKAYIRGGKQVDGVLENMTANKIDEDEETKTILS 495
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 273/464 (58%), Gaps = 13/464 (2%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ + R+L + + + + W + G ++ K+EL R+V+ELRK +RYKHALE+ +WM
Sbjct: 56 DTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMT 115
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+ + +L A D A+ LDLIAK+ G+ASAE FF L D +K + ALL+ YV+ ++
Sbjct: 116 KQHD-IKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSE 174
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE L++KM + G+ LPYN M++LY+ + ++V M+ E+K K DV +YN+WL
Sbjct: 175 KAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLWL 233
Query: 254 SSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+ C SQ E E V L+++ KA ++P+W T+S++ +YIK G ++KA +L +E R
Sbjct: 234 TVCASQNDVETAEKV--LLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRT 291
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
+ + R+ Y L+SL+ ++ K+ V+R+W +S+F + + Y MISSL ++G+ E E
Sbjct: 292 SRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAE 351
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
++ EW SV + D R+ N++++ Y+ + + AE F+N ++E G P+ T+WE L G+
Sbjct: 352 NLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGY 411
Query: 433 IRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
++++++ + L + A + K W P V +K EE+ ++ E + +LR+ G+
Sbjct: 412 LKKKQMEKVLDYFEKAVGS--VKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGH 469
Query: 493 RKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLLSQ 530
+ Y L+ G VAE KK+ + DE++ L+ +
Sbjct: 470 VSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKE 513
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 28/302 (9%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ V ALL+ Y + AE ++ ++ + +N+M++ Y KI + +
Sbjct: 702 DQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFE----AWNLMVSGYGKIGLIMKCIGLF 757
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+ GI D S +SSC G+T + M + ++ N + +++ MY K
Sbjct: 758 REMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYM-IKNLMDENVSVNNSLIDMYGK 816
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G + A RR+ RI RD V ++ L+S Y G E +++ + + P
Sbjct: 817 SGNLTIA----RRIFCRIP-RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSAT 871
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
L ++S+ + + +E EK+ K ++ IA ++ Y K G +K+ FNS
Sbjct: 872 LV--XVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNS 929
Query: 413 IIEEGGKPNSTSWETLAEG---HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFK 469
+ E + +W + G H R +E F S +P + +
Sbjct: 930 MHER----DVITWNVMISGYGMHGDARSAIE-------XFQQMEESSAKPNGLTFLAVLS 978
Query: 470 AC 471
AC
Sbjct: 979 AC 980
>gi|395146485|gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 159/421 (37%), Positives = 243/421 (57%), Gaps = 10/421 (2%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++R+LS + VLND+ G S+ K EL R VKELRK+ R+ H LE+ +WM R
Sbjct: 46 LYRRLSALGATGGTVDKVLNDYVMDGMSIRKVELMRCVKELRKYGRFNHGLEIMEWMEKR 105
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
G L D A++LDLI K G+ AE++F L + K+ YG+LLN+Y + A
Sbjct: 106 G--INLGHGDLAVRLDLICKTKGITEAENYFNGLVPSAKNPATYGSLLNSYCKKLDSEKA 163
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
L KM + +SLP+N +M++YM++ + ++V +VS+MK+ + ++YNIW+ S
Sbjct: 164 LQLFQKMDKLKFFRNSLPFNNLMSMYMRLGQQEKVPELVSQMKQMNLPPCTFTYNIWIQS 223
Query: 256 CGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
G E ++ V E M+ V+ N NWTT+S +A +Y G+ E+A+ +L+ +E RI
Sbjct: 224 LGHMRDFEGIKKVLEEMRNDVNFGNNFNWTTYSNLAAVYTSAGEFERAKLALKMMEERID 283
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
DR YH+LL+LYG + EEV+RVW ++ F VTN Y M+ +LAR+ D+EG+ K
Sbjct: 284 SHDRNAYHFLLTLYGGIADLEEVHRVWGCLKAKFNQVTNASYLVMLQALARLKDVEGISK 343
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
+FEEW SV +SYD R+AN+ + Y+++G +++AEA F+ +E P + E L +
Sbjct: 344 VFEEWESVCTSYDMRVANVAIRVYLEKGMYNEAEAVFDGAMERTPGPYFKTREMLMVSLL 403
Query: 434 RERRILEALSCLKGAFAAEGA------KSWRPKPVNVINFFKACEEESDMGSKEAFVALL 487
+ R++ AL +K AF G K WRP V FF EEE D+ E +L
Sbjct: 404 KRRQLEPALKQMKAAFTEVGQNEKGHEKEWRPSAEIVNAFFGYFEEEKDVEGAEKMWKIL 463
Query: 488 R 488
+
Sbjct: 464 K 464
>gi|225468646|ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 231/398 (58%), Gaps = 6/398 (1%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
LN + K + + KWE+ VK+LR +R+ AL++ + M RG ++ SD AI LDLI
Sbjct: 42 LNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETMAKRG--MNMTISDQAIYLDLI 99
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
K GVA+AE++F+ LP+T K+ YGALLN Y + + AE L+++M++ + S+P
Sbjct: 100 TKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMP 159
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN +MTLY KI + +++ +++ E+K I D Y+YNIW+ + + +E V E MK
Sbjct: 160 YNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMK 219
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D V +WTT+S +A++Y+ G EKAE++L+ +E R RD + +L++LYG +G
Sbjct: 220 RDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRNACRDLTAFQFLITLYGRIGNL 279
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
EVYRVW R FP N+ Y MI L + D+ G EK F EW S S YD R+AN +
Sbjct: 280 LEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANAL 339
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA--- 450
+ Y K+G +KAE G KPN+ +WE H++ R + +A+ C+ A +
Sbjct: 340 IGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAISTGR 399
Query: 451 AEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
+G K W P P + F + E+E D+ E F+ +L+
Sbjct: 400 GDGQK-WVPSPEIIGVFMQHFEQEKDVDGAEGFLEILK 436
>gi|242083618|ref|XP_002442234.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
gi|241942927|gb|EES16072.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
Length = 501
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/435 (35%), Positives = 245/435 (56%), Gaps = 5/435 (1%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ + ++L + P+ + VL W + GR++ K++L RVV+ELRK+ R+KHALE+ +WM
Sbjct: 30 DTLGKRLLKLIYPKRSAVVVLRRWAEEGRTVEKYQLNRVVRELRKYGRFKHALEICEWMR 89
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
R E RL D A+ LDL+AKV G+ASA FF +P+ K ALL+AYV+ R
Sbjct: 90 TRPE-MRLLPGDHAVHLDLVAKVRGLASAVKFFEDMPERAKAPSTCNALLHAYVQHGARE 148
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE ++ +M GY +LP+N MM+LYM E + V M+ E++ + D+ +YN+WL
Sbjct: 149 KAEAMMAEMARAGYLTCALPFNHMMSLYMASGELERVPEMIKELRRYTVP-DLVTYNMWL 207
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+ C + S + E VF LMK D+ V P+W TFS + ++YI G + +L +E +
Sbjct: 208 TYCSKKKSVKSAEKVFALMKDDRVV-PDWMTFSLLGSIYINAGLHVEGRNALVEMEKMAS 266
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
++R Y LL+LY S+ + + RVWN R F ++ Y M++SL R DI E
Sbjct: 267 RKERAAYSSLLTLYASLSDRGNLDRVWNKMRETFRKFSDTEYKCMLTSLTRFNDIAAAEG 326
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
++ EW S + D RI N ++S+Y+K G +KAE+F I+E+G KP+ ++WE G++
Sbjct: 327 LYREWESASGTRDSRIPNTILSYYIKNGMIEKAESFLGQIVEKGVKPSYSTWELFIWGYL 386
Query: 434 RERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYR 493
+ + + L CLK A ++ + W P F E+ D+ + E + + R GY
Sbjct: 387 GDNKTDKVLECLKKALSS--LEKWEPNHELATAIFSQVEKTGDIEAAEKLLVVFRDAGYV 444
Query: 494 KEKDYMSLIGLTDEA 508
+ Y S++ EA
Sbjct: 445 TTEMYNSVLRTYAEA 459
>gi|224119780|ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus trichocarpa]
Length = 490
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 228/398 (57%), Gaps = 4/398 (1%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
LN + K + + KWE+ +K+LR Y A+++ + M++RG + SD AI LDL+
Sbjct: 43 LNQFLKSSKRVFKWEVGDTIKKLRSRNLYYPAVKLSETMSSRG--MNKTVSDQAIHLDLV 100
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
AK G+ +AE++F+ LP+T K+ R YGALLN Y + M AE LI+KM++ + S+
Sbjct: 101 AKTRGIPAAENYFIDLPETSKNLRTYGALLNCYCKELMTEEAEALIEKMKELNLGLSSMS 160
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN +MTLY K+ + + + +++ EMK + D Y+YN+W+ + + +E V E MK
Sbjct: 161 YNSLMTLYTKVGQPERIPAIIQEMKADNVMPDSYTYNVWMRALAAVNDISGVERVIEEMK 220
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D V NWTT+S +A++Y+ G +KAE++L+ +E +D + +L++LYG GK
Sbjct: 221 RDGRVAANWTTYSNLASIYVDAGYFDKAEKALKELEKINANKDLFAFQFLITLYGRTGKL 280
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
EVYR+W R FP N+ Y MI L + D+ G EK F EW S S+YD R+AN++
Sbjct: 281 IEVYRIWRSLRLAFPKTANISYLNMIQVLVNLKDVPGAEKCFREWESGCSTYDIRVANVV 340
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA-- 451
+S Y KEG DKAE G KPNS +WE + +++ + + C+ A +A
Sbjct: 341 ISAYAKEGLVDKAEELKERARRRGAKPNSKTWEIFCDYYLKNGDVKLGVDCIANAVSAGR 400
Query: 452 EGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
+ W P PV V + E++ D+ E + +L++
Sbjct: 401 GNGQKWVPSPVIVGSLMAHFEQQKDVDGAEDLIEILKK 438
>gi|226530677|ref|NP_001151760.1| tetratricopeptide-like helical [Zea mays]
gi|195649553|gb|ACG44244.1| tetratricopeptide-like helical [Zea mays]
gi|223942137|gb|ACN25152.1| unknown [Zea mays]
gi|413916645|gb|AFW56577.1| Tetratricopeptide-like helical [Zea mays]
Length = 501
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/435 (35%), Positives = 242/435 (55%), Gaps = 6/435 (1%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ + ++L + P+ + VL W GR++ K++L RVV+ELRK+ R+KHALE+ +WM
Sbjct: 31 DTLGKRLLKLIYPKRSAVVVLQRWADEGRTVQKYQLNRVVRELRKYGRFKHALEICEWMR 90
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+ E RL D A+ LDL+AKV G+ASA FF +P+ K ALL+AYV+ R
Sbjct: 91 TQPE-MRLLPGDHAVHLDLVAKVRGLASATKFFEDMPERAKGPSTCNALLHAYVQNGARE 149
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE ++ +M GY +LP+N MM+LYM E + V M+ E++ + D+ +YNIWL
Sbjct: 150 KAEAMLAEMARVGYLTCALPFNHMMSLYMATGELERVPEMIKELRRYTLP-DLVTYNIWL 208
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+ C + S + E VF LMK D V P+W TFS + ++YI G + +L +E R +
Sbjct: 209 TYCSKKDSVKSAEKVFGLMK-DDCVVPDWMTFSLLGSIYINAGLHVEGRNALVEMEKRAS 267
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
++R Y LL+LY S+ + + RVWN R F ++ Y M++SL R DI E
Sbjct: 268 RKERAAYSSLLTLYASLSDRGNLDRVWNKMRGTFRKFSDTEYKCMLTSLLRFDDIAAAES 327
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
IF EW S + D RI N ++S+Y+K G KAE+F + I+E+G KP+ ++WE G++
Sbjct: 328 IFSEWESTSGTRDSRIPNTILSYYIKNGMIKKAESFLDHIVEKGVKPSYSTWEAFVWGYL 387
Query: 434 RERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYR 493
+ + + L C+K A + + W P F E+ D+ + E + + R Y
Sbjct: 388 GD-KTDKVLECMKKALSC--LEKWEPNHELATAIFSQIEKTGDIEAAEKLLVIFRDAEYV 444
Query: 494 KEKDYMSLIGLTDEA 508
+ Y S++ EA
Sbjct: 445 TTEMYNSVLRTYAEA 459
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 242/417 (58%), Gaps = 1/417 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ + +VL +W G +T +L V ++L K +R+KHALE+ WM + RF++SA+D
Sbjct: 23 PRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWMEAQN-RFQMSAAD 81
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
AI+L+LI K+ +A AE++F LP++ + LL+AYV+ R AE L+ K+ D
Sbjct: 82 HAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALMLKLNDL 141
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G V P+N MM LYM +++ V +++ +MK+ I L+V SYN+W+S+C
Sbjct: 142 GLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEVSGLASA 201
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E V++ M DK V W+T ST+A +Y+K G ++KA +L+ E +++ +R+ Y +L++
Sbjct: 202 EMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRLGYFFLIT 261
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+Y S+ KEEV R+W + V +T+ Y ++ L ++GDI E+IF EW S Y
Sbjct: 262 MYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREWESKCWKY 321
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
D R++N+++ Y++ G+ DKAE+ +E GG PN +WE L EG ++ + + +A++ +
Sbjct: 322 DIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQNMDKAINAM 381
Query: 446 KGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
K F+ WRP V + EE ++ +V ++ Q G K Y SL+
Sbjct: 382 KKGFSMLKHCDWRPNHGLVTAIARYLEEHGNVNDLNQYVKVIHQLGVAKLPLYKSLL 438
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 269/467 (57%), Gaps = 18/467 (3%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLT-KWELCRVVKELRKFRRYKHALEVYDWM 132
+ + R+L + P+ + +N W++ G +L K++L R+++ELRK +RYKHALEV +WM
Sbjct: 36 DTLGRRLLSLVYPKRSAVIAINKWKEEGHTLPRKYQLNRMIRELRKNKRYKHALEVCEWM 95
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
+ + +L D A+QLDLI KV G+ SAE FF LPD ++ + ALL+AYV+ +
Sbjct: 96 KLQND-IKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLT 154
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
AE L+ KM + G+ +PYN MM+LY+ + ++V + E+K DV ++N+
Sbjct: 155 NKAEALMSKMSECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEELK-VNTSPDVVTFNLL 213
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKMGQV----EKAEESLRR 307
L++C S+ E E V L+++ KA V+P+W T+ST+ +YI+ V EKA +L+
Sbjct: 214 LTACASENDVETAERV--LLQLKKAKVDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKE 271
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD 367
+E R + RV Y LLSL+ ++G +EV R+W ++ F +++ Y MISSL ++GD
Sbjct: 272 MEKRTSRETRVAYSSLLSLHANMGNVDEVNRIWGKMKACFCKMSDDEYVCMISSLVKLGD 331
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
G+E +++EW SV + D R++NL+++ YV +G + AE F N ++E+G + +SWE
Sbjct: 332 FAGVENLYKEWESVSGTNDVRVSNLLLTSYVDQGQMEMAEIFCNQLVEKGVCLSYSSWEL 391
Query: 428 LAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALL 487
L G+++++ + + L A ++ K W P P V F +E++ + E + +L
Sbjct: 392 LTRGYLKKKDVKKFLHYFGKAISS--VKQWIPDPRLVQEAFTVIQEQAHIEGAEQLLVIL 449
Query: 488 RQPGYRKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLL 528
R G+ Y + G VAE KK++ D+++ LL
Sbjct: 450 RNAGHVNTNIYNLFLKTYAAAGKMPLVVAERMKKDNVQLDKETHRLL 496
>gi|255573975|ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532680|gb|EEF34462.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 490
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 224/399 (56%), Gaps = 6/399 (1%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
LN + K + + KWE+ +K+LR Y AL++ + M+ RG + SD AI LDL+
Sbjct: 43 LNQFLKSSKRVYKWEVGDTLKKLRSRGLYYPALKLSEAMSKRG--MNKTVSDQAIHLDLV 100
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
AK G+ +AE FF+ LP+T K+ YGALLN Y M AE L++KM++ + S+
Sbjct: 101 AKTRGIPAAEIFFIDLPETSKNHLTYGALLNCYCNQLMTEEAEALMEKMKELNLGLSSMS 160
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN +MTLY KI + + + ++ EMK I D Y+YN+W+ + + E V E MK
Sbjct: 161 YNSLMTLYTKIGQPERIPGIIQEMKSDSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 220
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D V +WTT+S +A++Y+ EKAE++L+ +E R RD + +L++LYG +G
Sbjct: 221 RDGRVAADWTTYSNLASIYVDAQLFEKAEKTLKELEKRNVHRDHSAFQFLITLYGRIGNL 280
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
E+YR+W R FP +N+ Y MI L + D+ G EK F EW S S YD R+AN++
Sbjct: 281 HELYRIWRSLRLAFPKTSNISYLNMIQVLVNLKDLPGAEKCFREWESNCSGYDIRVANVL 340
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA--- 450
+ Y K+G +KAE I G KPN+ +WE ++ + I ++ CL A +
Sbjct: 341 IKAYAKKGLLEKAEELKERAIGRGAKPNAKTWEIFSDYYFENGDIKLSVECLANAISKGR 400
Query: 451 AEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
+G K W P P V +F E++ D+ E F+ +L++
Sbjct: 401 GDGQK-WIPSPEVVASFMAHFEQQKDVDGAEGFIEILKK 438
>gi|449458295|ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 240/425 (56%), Gaps = 5/425 (1%)
Query: 67 RRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHAL 126
R P ++ +LS + A +N + G + K+EL + +KELRK+RRY H L
Sbjct: 2 RSPANNQRGLYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCL 61
Query: 127 EVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAY 186
++ +WM R + S +D A++LDLI+KV+GV +AE +F LP + K+R YGALLN Y
Sbjct: 62 QIMEWMETR--KINYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCY 119
Query: 187 VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV 246
+ M A L KM D+ SL +N +MT+YM++ ++V ++ EMK++G L
Sbjct: 120 CKEMMEEKALTLFKKM-DELKISTSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTT 178
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
++YN+W++SC S K+E + E MK++ +WTT+S +A+ Y+K GQ EKAE +L+
Sbjct: 179 FTYNVWMNSCASLNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALK 238
Query: 307 RVESRITG--RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
++E + DR+ YH L+SLY S EV R+WN +SV+ +TN+ Y M+ +L +
Sbjct: 239 KLEEEMKSDKNDRLVYHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRK 298
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
+ DIEG+++ ++EW S ++D RI N ++ Y+++ ++ A F + P S +
Sbjct: 299 LKDIEGLKRTYKEWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRA 358
Query: 425 WETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFV 484
E ++ +++ A S L+ A + K W P F EEE D+ E F
Sbjct: 359 REMFMVYFLKLKQVDSAFSHLESALSESKEKEWHPSLATTTAFLNYFEEEKDVEGAEDFA 418
Query: 485 ALLRQ 489
+L++
Sbjct: 419 RILKR 423
>gi|388512893|gb|AFK44508.1| unknown [Medicago truncatula]
Length = 244
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/242 (54%), Positives = 175/242 (72%), Gaps = 5/242 (2%)
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
M EKA+E L++ E RI GRD+VP+HYLLSLYGSVG K+EVYRVWN Y+S+FP + NLG
Sbjct: 1 MELFEKAQECLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLG 60
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
YHA+ISSL R+ DIEG EK++EEW+SV+ S D RI NL++SWY+K+G DK +FF +
Sbjct: 61 YHAIISSLVRMDDIEGAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMS 120
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEE 474
E GG PNST+WE L+EGHI E+R+ EALSCL+ AF +KSW+PKP+ + F K C++E
Sbjct: 121 EGGGCPNSTTWELLSEGHIAEKRVSEALSCLEKAFMTSDSKSWKPKPIKLAAFLKLCQDE 180
Query: 475 SDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKNDEDS----DEDSEMLLSQ 530
DM S + + LLR+PGY ++ Y +LI DE + +D DS D+DS++L SQ
Sbjct: 181 DDMESAKVLIELLRKPGYHNDEAYAALIS-KDEPSNRTERIDDVDSENMDDDDSQVLFSQ 239
Query: 531 LQ 532
+
Sbjct: 240 VD 241
>gi|359485373|ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 249/422 (59%), Gaps = 6/422 (1%)
Query: 71 IKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYD 130
I+ ++++ ++ + +P+ + +LN W + G++++K +L +V+ ++ FRR+ HALE+
Sbjct: 19 IQISSLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQ 78
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WM +R F L+ SDAAI+LDLI+ VHG AE +F ++P+ LK YGALL+ YVR +
Sbjct: 79 WMTDR-RYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREK 137
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
AE + KMR+ +A S PYN+++ LY + + ++E+++ EM+ K I D ++
Sbjct: 138 SVEKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVR 197
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
+ + + ME M+ D ++ +W +S A+ Y+K+G ++KA E L+++ES
Sbjct: 198 NLMVAYVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIES 257
Query: 311 RITGRDRV-PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
+R+ + +LLSLY G K+E+YRVWNLY+ + Y MI+ L ++ DIE
Sbjct: 258 NRPHLERLSAFKFLLSLYARTGHKQELYRVWNLYKPSYEYPE--AYSCMITCLTKLDDIE 315
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
G EKIF+EW + YD R+ N ++S Y K FDKAE+ N +IEE P +++W LA
Sbjct: 316 GAEKIFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEE-RMPYASTWNILA 374
Query: 430 EGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
+G++ ++++ +A+ LK A + G K WRP + + + E + ++ E L +
Sbjct: 375 KGYVEDKQMPKAVEMLKKAISV-GRKGWRPNSIILDACIEYLEGQGNLEEIEEIARLCKN 433
Query: 490 PG 491
G
Sbjct: 434 LG 435
>gi|302143278|emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 249/422 (59%), Gaps = 6/422 (1%)
Query: 71 IKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYD 130
I+ ++++ ++ + +P+ + +LN W + G++++K +L +V+ ++ FRR+ HALE+
Sbjct: 19 IQISSLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQ 78
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WM +R F L+ SDAAI+LDLI+ VHG AE +F ++P+ LK YGALL+ YVR +
Sbjct: 79 WMTDR-RYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREK 137
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
AE + KMR+ +A S PYN+++ LY + + ++E+++ EM+ K I D ++
Sbjct: 138 SVEKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVR 197
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
+ + + ME M+ D ++ +W +S A+ Y+K+G ++KA E L+++ES
Sbjct: 198 NLMVAYVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIES 257
Query: 311 RITGRDRV-PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
+R+ + +LLSLY G K+E+YRVWNLY+ + Y MI+ L ++ DIE
Sbjct: 258 NRPHLERLSAFKFLLSLYARTGHKQELYRVWNLYKPSYEYPE--AYSCMITCLTKLDDIE 315
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
G EKIF+EW + YD R+ N ++S Y K FDKAE+ N +IEE P +++W LA
Sbjct: 316 GAEKIFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEE-RMPYASTWNILA 374
Query: 430 EGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
+G++ ++++ +A+ LK A + G K WRP + + + E + ++ E L +
Sbjct: 375 KGYVEDKQMPKAVEMLKKAISV-GRKGWRPNSIILDACIEYLEGQGNLEEIEEIARLCKN 433
Query: 490 PG 491
G
Sbjct: 434 LG 435
>gi|356536769|ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Glycine max]
Length = 516
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 155/463 (33%), Positives = 263/463 (56%), Gaps = 14/463 (3%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDW-EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWM 132
+ + R+L + P+ + +N W E+G K++L R+V+ELRK +RYKHALEV +WM
Sbjct: 44 DTLGRRLLSLVYPKRSAVVAINKWKEEGHEPPRKYQLNRIVRELRKDKRYKHALEVCEWM 103
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
+ + +L D A+ LDLI KV G+ SAE FF LPD ++ ++ ALL+AYV+ +
Sbjct: 104 TLQKD-MKLVQGDYAVHLDLITKVRGLNSAEKFFEDLPDRMRGKQTCSALLHAYVQNNLV 162
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
AE L+ KM + ++ LPYN M++LY+ + ++V ++ E+K D+ ++N+W
Sbjct: 163 DKAEALMLKMSECDLLINPLPYNHMISLYISNGKLEKVPKIIQELK-MNTSPDIVTFNLW 221
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
L++C SQ E E V L+++ KA ++P+W T+ST+ +YIK +EKA +++ +E+R
Sbjct: 222 LAACASQNDVETAERV--LLELKKAKIDPDWVTYSTLTNLYIKNASLEKAGATVKEMENR 279
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
+ + RV Y LLSL+ ++G K++V R+W ++ F + + Y MISSL ++GD G
Sbjct: 280 TSRKTRVAYSSLLSLHTNMGNKDDVNRIWEKMKASFRKMNDNEYICMISSLLKLGDFAGA 339
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
E ++ EW SV + D R++N+++ Y+ + + AE F N I+++G P T+WE G
Sbjct: 340 EDLYREWESVSGTNDVRVSNILLGSYINQDQMEMAEDFCNQIVQKGVIPCYTTWELFTWG 399
Query: 432 HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPG 491
+++ + + + L A ++ W P V FK EE++ E + +LR G
Sbjct: 400 YLKRKDVEKFLDYFSKAISS--VTKWSPDQRLVQEAFKIIEEQAHTKGAEQLLVILRNAG 457
Query: 492 YRKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLL 528
+ Y + G VAE +K++ DE++ LL
Sbjct: 458 HVNTNIYNLFLKTYATAGKMPMIVAERMRKDNVKLDEETRRLL 500
>gi|296083491|emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/358 (38%), Positives = 211/358 (58%), Gaps = 2/358 (0%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
LN + K + + KWE+ VK+LR +R+ AL++ + M RG ++ SD AI LDLI
Sbjct: 42 LNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETMAKRG--MNMTISDQAIYLDLI 99
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
K GVA+AE++F+ LP+T K+ YGALLN Y + + AE L+++M++ + S+P
Sbjct: 100 TKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMP 159
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN +MTLY KI + +++ +++ E+K I D Y+YNIW+ + + +E V E MK
Sbjct: 160 YNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMK 219
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D V +WTT+S +A++Y+ G EKAE++L+ +E R RD + +L++LYG +G
Sbjct: 220 RDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRNACRDLTAFQFLITLYGRIGNL 279
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
EVYRVW R FP N+ Y MI L + D+ G EK F EW S S YD R+AN +
Sbjct: 280 LEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANAL 339
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
+ Y K+G +KAE G KPN+ +WE H++ R + +A+ C+ A +
Sbjct: 340 IGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAIST 397
>gi|449462348|ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
gi|449491586|ref|XP_004158945.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
Length = 531
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 269/461 (58%), Gaps = 12/461 (2%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ + R+L + P+ + + + W++ GR++ K+EL R V+ELRK +RYKHALEV +WM
Sbjct: 48 DTLGRRLMSLIFPKRSAVTAIRKWQEEGRTVRKYELNRNVRELRKLKRYKHALEVCEWMT 107
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+ + RL D A+ LDLI K+ G+ AE FF LPD ++++ V +LL+AYV+ +
Sbjct: 108 LQKD-MRLVPGDYAVHLDLICKIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQNNLSE 166
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE L++KM + G+ L +N M++L++ K+ ++V +++ +K K + DV +YN+ L
Sbjct: 167 KAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPALIEGLK-KNTKPDVVTYNLLL 225
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+ C Q TE E +F MK K + P+W +FST+A +Y K EKA +L+ +E
Sbjct: 226 NVCTLQNDTEAAENIFLEMKKTK-IQPDWVSFSTLANLYCKNQLTEKAAATLKEMEKMAF 284
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
+R+ LLSLY ++G K EVYR+W +S F +++ Y MISSL ++ ++E EK
Sbjct: 285 KSNRLSLSSLLSLYTNLGDKNEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNELEEAEK 344
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
++ EW SV + D R++N+M+ Y+K+ ++AE+F+N ++++G P+ T+WE L G++
Sbjct: 345 LYTEWESVSGTRDTRVSNVMLGAYIKKNQIEQAESFYNRMLQKGTVPSYTTWELLTWGYL 404
Query: 434 RERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYR 493
+E ++ + L + A K W V K EE+ ++ E + +LR G+
Sbjct: 405 KENQMEKVLHFFRK--AVNRVKKWNADERLVKGVCKKLEEQGNINGVEQLLLILRNAGHV 462
Query: 494 KEKDYMSLIGLTDEA------VAEN-NKKNDEDSDEDSEML 527
+ Y SL+ +A VAE + N + +DE E+L
Sbjct: 463 DTEIYNSLLRTYAKAGKMPLIVAERMERDNVQLNDETRELL 503
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 276/506 (54%), Gaps = 21/506 (4%)
Query: 31 FTRLHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGS 90
F RL +H Q L CS+ +++ + ++ ++S + P L
Sbjct: 6 FNRLKSN---RHVSQTLISNVCSVRSVYTGRFANIN---------LYSRISPLGTPNLSL 53
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
VL+ W + G+ + EL R++++LR +RY ALEV +WM+++ E S S A+QL
Sbjct: 54 VPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSK-ELCPFSPSARAVQL 112
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
DLI +V G+ SAE++F ++ K ++YGALLN YVR R+ + + KM++ G+A
Sbjct: 113 DLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFAST 172
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
LPYN +M LY+ + +++ ++SEM+E GI D +SY + ++S G++ ME + E
Sbjct: 173 PLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILE 232
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M+ ++ +W T+S +A YIK G EKA L++ E+++ +D + Y++L+SLY S+
Sbjct: 233 EMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLH-KDPLGYNHLISLYASL 291
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
G K E+ R+W ++ + N Y M+ SL ++G++E E + +EW S + YD R+
Sbjct: 292 GSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGNCYDFRVP 351
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
N ++ + ++G +KAE+ I+EEG P SW +A G+I ++ + +A C+K A A
Sbjct: 352 NTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIA 411
Query: 451 AEGA-KSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI------G 503
K WRPKP + + + D+ E FV+ L+ + Y + I G
Sbjct: 412 VLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDREMYHAQIRASIRAG 471
Query: 504 LTDEAVAENNKKNDEDSDEDSEMLLS 529
+ + ++ K + D DE++ +LS
Sbjct: 472 KEVDGILDSMKADKIDEDEETRKILS 497
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 276/506 (54%), Gaps = 21/506 (4%)
Query: 31 FTRLHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGS 90
F RL +H Q L CS+ +++ + ++ ++S + P L
Sbjct: 6 FNRLKSN---RHVSQTLISNVCSVRSVYTGRFANIN---------LYSRISPLGTPNLSL 53
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
VL+ W + G+ + EL R++++LR +RY ALEV +WM+++ E S S A+QL
Sbjct: 54 VPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSK-ELCPFSPSARAVQL 112
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
DLI +V G+ SAE++F ++ K ++YGALLN YVR R+ + + KM++ G+A
Sbjct: 113 DLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFAST 172
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
LPYN +M LY+ + +++ ++SEM+E GI D +SY + ++S G++ ME + E
Sbjct: 173 PLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILE 232
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M+ ++ +W T+S +A YIK G EKA L++ E+++ +D + Y++L+SLY S+
Sbjct: 233 EMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKL-HKDPLGYNHLISLYASL 291
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
G K E+ R+W ++ + N Y M+ SL ++G++E E + +EW S + YD R+
Sbjct: 292 GSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGNCYDFRVP 351
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
N ++ + ++G +KAE+ I+EEG P SW +A G+I ++ + +A C+K A A
Sbjct: 352 NTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIA 411
Query: 451 AEGA-KSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI------G 503
K WRPKP + + + D+ E FV+ L+ + Y + I G
Sbjct: 412 VLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDREMYHAQIRASIRAG 471
Query: 504 LTDEAVAENNKKNDEDSDEDSEMLLS 529
+ + ++ K + D DE++ +LS
Sbjct: 472 KEVDGILDSMKADKIDEDEETRKILS 497
>gi|255556039|ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541717|gb|EEF43265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 485
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 157/461 (34%), Positives = 256/461 (55%), Gaps = 8/461 (1%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
++ K+S + +P L++W + G + EL R++++LRK R+ ALEV +WMN
Sbjct: 15 TLYSKISPLGDPNTSLVPELDNWVQDGNKVRVGELQRIIRDLRKRNRFTQALEVSEWMNK 74
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN 194
+G S+++ A+QLDLI KV G SAE++F +L D K + YGALLN YVR R
Sbjct: 75 KGICI-FSSTEHAVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYGALLNCYVRQRQTDR 133
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
+ KM++ G A L YN +M LY+ + Y++V +++EMKE I D +SY I ++
Sbjct: 134 SISHWQKMKEMGLASSPLAYNDIMCLYINLGLYEKVLHVLTEMKENKISPDNFSYRICIN 193
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
S G++ + ME V M+ +W T++ +A YIK G +KA ++LR+ E ++
Sbjct: 194 SYGARSDIQGMEKVLNEMECRLGNAMDWNTYAVVANFYIKAGLADKAVDALRKSEEKLDK 253
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
+D + Y++L+SLY ++G K EV R+W+L +SV N + M+ SL ++GD+E EK+
Sbjct: 254 KDGIGYNHLISLYATLGIKSEVLRIWDLQKSVCKRRINRDFVTMLESLVKLGDLEEAEKV 313
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+EW S + YD RI N+++ Y K G +KAEA +++E+G SW +A G++
Sbjct: 314 LKEWESSGNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGRATTPNSWAMIASGYLE 373
Query: 435 ERRILEALSCLKGAFAAE-GAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYR 493
+ +A C+K AF+ K W+P P V++ +E EAFVA L
Sbjct: 374 KGEKAKAFECMKAAFSLNVEKKGWKPNPRVVMDILIWLGDEGSPEDVEAFVASLSVAIPL 433
Query: 494 KEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLL 528
+ Y +L+ G + + K + D DE+++ +L
Sbjct: 434 NRQIYHALLKAKIRSGRDAHEILDRMKTDKIDEDEETKEIL 474
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 245/416 (58%), Gaps = 10/416 (2%)
Query: 79 KLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN-RGE 137
++S NP++ V+ W K G S+ + +L +K R+ RR+ HAL++ WM++ RG
Sbjct: 9 RISRAGNPKVSIIPVIEQWLKEGNSIKQSDLQNFIKLFRRHRRFSHALQISQWMSDERGS 68
Query: 138 RFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAEL 197
S D A++LDLI+KVHG+ AE+++ S+PD L+ +VYGALLN Y R AE
Sbjct: 69 E--QSPGDFAVRLDLISKVHGLEQAEEYYNSIPDHLRGTQVYGALLNCYAHKRRLEKAEA 126
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
+ KMR+ G V +L YNVM++LY + Y+++E++V EM+EKG+ D+Y++NI L +
Sbjct: 127 TMQKMRELGL-VQTLSYNVMLSLYSHMGRYEKLEALVKEMEEKGVNSDIYTFNIRLHAYV 185
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES---RITG 314
+ + E+ME + M+ D +N ++ TF +A Y+K G +EK+ L+R E + G
Sbjct: 186 ATSNIEEMEKLLMKMETDSLINIDFHTFFAVANGYLKAGLLEKSIVMLKRAEELTVPMVG 245
Query: 315 RDRV-PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
+ Y LL+LYGS G K+ VYRVWN Y++ + N Y MI+SL R+GDI+G E
Sbjct: 246 TTKAHAYEMLLTLYGSAGNKDGVYRVWNSYKNT-GRIFNSTYICMINSLMRLGDIDGAEW 304
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
I EEW+S K+ YD RI N M+ Y ++G + KAE + N I+E G + ++SW+ LA G+
Sbjct: 305 ISEEWVSRKTLYDIRIPNTMIRAYSRKGLWKKAEEYVNKIVESGMQLEASSWDHLATGYH 364
Query: 434 RERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
++ +A+ LK A + W+P P + E + D + E + + +
Sbjct: 365 FGGQMAKAVETLKKAISI-SKPGWKPNPYTLKTCLWYLESKGDEEAAEELLKFVSE 419
>gi|297837423|ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332434|gb|EFH62852.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 225/398 (56%), Gaps = 6/398 (1%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
LN + KG + + KWE+ +K+LR Y AL++ + M RG + SD AI LDL+
Sbjct: 43 LNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEERG--MNKTVSDQAIHLDLV 100
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
AK G+ + E++F+ LP+T K YG+LLN Y + + AE L++KM++ S+
Sbjct: 101 AKARGITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMS 160
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN +MTLY K + ++V +M+ E+K + + D Y+YN+W+ + + +E V E M
Sbjct: 161 YNSLMTLYTKTGQTEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMN 220
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D V P+WTT+S MA++Y+ G +KAE++L+ +E + T RD Y +L++LYG +GK
Sbjct: 221 RDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKL 280
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
EVYR+W R P +N+ Y MI L ++ D+ G E +F+EW + S+YD RI N++
Sbjct: 281 TEVYRIWRSLRLAMPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVL 340
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA--- 450
+ Y KEG +KA+ GGK N+ +WE + +++ + AL C+ A +
Sbjct: 341 IGAYAKEGLIEKAKELKEKAPRRGGKANAKTWEIFMDYYVKSGDMAHALECMSKAVSIGK 400
Query: 451 AEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
+G K W P V E++ D+ E + +L+
Sbjct: 401 GDGGK-WIPSQETVRTLMSYFEQKKDVNGAENLLEILK 437
>gi|224138178|ref|XP_002322749.1| predicted protein [Populus trichocarpa]
gi|222867379|gb|EEF04510.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 258/471 (54%), Gaps = 15/471 (3%)
Query: 23 LPCKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFER--RPMI-KWNAIFRK 79
+P + R+ + + + +RQ L + + SY T R +P N ++ +
Sbjct: 12 VPLTVKTLHHRIIRNTVMGPRRQPLIINR-------SYSTTPTGRTKKPWTDAMNVLYNR 64
Query: 80 LSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERF 139
+S + + ++ + LN W G+ + K +L +KELR +RY HALE+ WM + G F
Sbjct: 65 ISSLADQRITISLFLNHWVLEGQPVNKNQLREFIKELRFHKRYAHALEISTWMTDSG-YF 123
Query: 140 RLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLI 199
L++ D A+QLDLI+KVHG+ A+ F + P LK +VY ALLN Y +A++ AE ++
Sbjct: 124 ELASQDVAVQLDLISKVHGIEQAQKLFNNTPQHLKVLKVYSALLNCYAKAKLVEKAESVV 183
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
+M+ G+A L YNV++ Y + D++ S++ EM++ GI D ++++I LS+ S
Sbjct: 184 QEMKSLGFANTLLVYNVILNFYYQTGNPDKINSLMQEMEQNGIGCDKFAHSIQLSAYASV 243
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR-V 318
+E M+ D V +WT+++ A YIK+G V+KA E L + E +TG+ R
Sbjct: 244 SDIVGIEKTLAKMESDPNVFLDWTSYTAAAKGYIKVGLVDKALEMLEKSERLVTGKRRGT 303
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
Y L++LY + GK EV R+W LY+ V Y ++I+SL ++ D E EKIFEEW
Sbjct: 304 AYDSLITLYAATGKTNEVLRIWELYKK-NEKVYKEAYISIITSLLKLDDFENAEKIFEEW 362
Query: 379 -LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
S YD I N ++ Y ++G +KAE + I +GG+PN+ +W LA G+++ +
Sbjct: 363 EFQNHSCYDIHIPNFLIDAYSRKGLVEKAETLIDRAISKGGEPNAKTWYHLATGYLQNGQ 422
Query: 438 ILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
L+A+ +K A G + W+P + N + E D+G F+ LLR
Sbjct: 423 TLKAVEAMKKAVVVSG-RMWKPSNEILANCLGYLKVEGDLGKLTNFMDLLR 472
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 233/414 (56%), Gaps = 2/414 (0%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++ +LS + A LN+ K G+ + K EL +K+LRK+R+++HALE+ DWM NR
Sbjct: 85 LYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENR 144
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
+ S +D A++LDL++K G+A+AE++F +L + K+ YG LLN Y + +M A
Sbjct: 145 --KIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKA 202
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
L +KM + +A SL +N +M+L+M++ + + V +V EMK++ I D ++YNI + S
Sbjct: 203 LALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQS 262
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
E E V E +K + +WTT+S +A +Y+ EKAE +L+++E +
Sbjct: 263 YARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFH 322
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
DR+ YH+L+SLY + EV RVWN +S FP N+ Y M+ +LA + D++G++ F
Sbjct: 323 DRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICF 382
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
EEW S S+D R+AN+ + ++ AE+ ++ P T+ + H++
Sbjct: 383 EEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKV 442
Query: 436 RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
R I AL ++ A + W+P P V+ F K EEE D+ E F +L+
Sbjct: 443 REIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKN 496
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 233/414 (56%), Gaps = 2/414 (0%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++ +LS + A LN+ K G+ + K EL +K+LRK+R+++HALE+ DWM NR
Sbjct: 46 LYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENR 105
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
+ S +D A++LDL++K G+A+AE++F +L + K+ YG LLN Y + +M A
Sbjct: 106 --KIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKA 163
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
L +KM + +A SL +N +M+L+M++ + + V +V EMK++ I D ++YNI + S
Sbjct: 164 LALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQS 223
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
E E V E +K + +WTT+S +A +Y+ EKAE +L+++E +
Sbjct: 224 YARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFH 283
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
DR+ YH+L+SLY + EV RVWN +S FP N+ Y M+ +LA + D++G++ F
Sbjct: 284 DRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICF 343
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
EEW S S+D R+AN+ + ++ AE+ ++ P T+ + H++
Sbjct: 344 EEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKV 403
Query: 436 RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
R I AL ++ A + W+P P V+ F K EEE D+ E F +L+
Sbjct: 404 REIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKN 457
>gi|15219808|ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097554|sp|O22714.1|PPR86_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g60770
gi|2462744|gb|AAB71963.1| Hypothetical protein [Arabidopsis thaliana]
gi|27754491|gb|AAO22693.1| unknown protein [Arabidopsis thaliana]
gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis thaliana]
gi|332195609|gb|AEE33730.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 223/398 (56%), Gaps = 6/398 (1%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
LN + KG + + KWE+ +K+LR Y AL++ + M RG + SD AI LDL+
Sbjct: 43 LNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEERG--MNKTVSDQAIHLDLV 100
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
AK + + E++F+ LP+T K YG+LLN Y + + AE L++KM++ S+
Sbjct: 101 AKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMS 160
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN +MTLY K E ++V +M+ E+K + + D Y+YN+W+ + + +E V E M
Sbjct: 161 YNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMN 220
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D V P+WTT+S MA++Y+ G +KAE++L+ +E + T RD Y +L++LYG +GK
Sbjct: 221 RDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKL 280
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
EVYR+W R P +N+ Y MI L ++ D+ G E +F+EW + S+YD RI N++
Sbjct: 281 TEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVL 340
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA--- 450
+ Y +EG KA GGK N+ +WE + +++ + AL C+ A +
Sbjct: 341 IGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGK 400
Query: 451 AEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
+G K W P P V E++ D+ E + +L+
Sbjct: 401 GDGGK-WLPSPETVRALMSYFEQKKDVNGAENLLEILK 437
>gi|224114960|ref|XP_002316903.1| predicted protein [Populus trichocarpa]
gi|222859968|gb|EEE97515.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 252/429 (58%), Gaps = 5/429 (1%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN-N 134
++ ++S + +P++ A VL+ W + G+ + +EL +VK LR+ +R+K ALEV WM+ N
Sbjct: 2 LYSRISPLGDPRISLAPVLDQWVEEGKKVKDYELRTIVKGLRERKRFKQALEVSQWMSSN 61
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN 194
R F S SD A++LDLI KVHG+ SAE +F +L + K + YGALLN YVR +
Sbjct: 62 RLCNF--SPSDDAVRLDLIGKVHGLESAESYFKNLDEKDKIHKTYGALLNCYVRGGLVEK 119
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
+ + KM++ G+ +L YN +M LY+ ++V ++S+MKE GI D++SY I L
Sbjct: 120 SLSHVQKMKELGFFSTALNYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYRICLK 179
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
S G + + +E + M+ ++ +W TF+T+A +Y++ G EKA L++ E ++
Sbjct: 180 SYGERSDFDNVEKILREMESQSHISMDWRTFATVANIYLEAGLKEKALVYLKKCEEKVN- 238
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
++ + Y++L+SLY S+G K+E+ R+W L ++ N Y ++ SL ++G +E EK+
Sbjct: 239 KNALGYNHLISLYASLGNKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEEAEKL 298
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
++W S YD R+ N+++ Y ++G +KAEA IIE+ N +SW ++ G++
Sbjct: 299 LQDWESSCQYYDFRVPNVVLIGYSRKGLPEKAEAMLQDIIEKQKMKNPSSWSIISAGYMD 358
Query: 435 ERRILEALSCLKGAFAAEGAKS-WRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYR 493
++ + +A C+K A AAE + WRPKP + N + D EAFV LL +
Sbjct: 359 KQNMEKAFECMKEALAAETENNGWRPKPAMISNILNWLGDNRDAQEVEAFVGLLETKVPK 418
Query: 494 KEKDYMSLI 502
+ Y +LI
Sbjct: 419 SREMYHALI 427
>gi|125579556|gb|EAZ20702.1| hypothetical protein OsJ_36321 [Oryza sativa Japonica Group]
Length = 491
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 239/429 (55%), Gaps = 13/429 (3%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ + R+L + P+ +A VL W + GR++ K++L RVV +LRK+RR+KHALE
Sbjct: 28 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVCQLRKYRRFKHALE-RKLSF 86
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
RG R S S + G+ SAE FF +P+ K ALL+AYV+ R
Sbjct: 87 FRGPRRCTSTS--------CQRSGGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRD 138
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE ++++M GY +LP+N MM+LYM E ++V M+ E++ I D+ +YNIWL
Sbjct: 139 KAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWL 197
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+ C + S + E V++LMK D+ V P+W TFS + ++YI G K ++L +E R +
Sbjct: 198 TYCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRAS 256
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
++R Y LL+LY S+ + + RVW R F ++ Y M++SL R GDI E
Sbjct: 257 RKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAES 316
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
+ EW S + D RI N ++++Y+K G +KAE F + I+++G KP+ ++WE G++
Sbjct: 317 FYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYL 376
Query: 434 RERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYR 493
+ R+ + L CLK A + + W P P + EE+ D+ + E + + R+ GY
Sbjct: 377 SDGRMDKVLECLKKALSC--LEKWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYV 434
Query: 494 KEKDYMSLI 502
+ Y S++
Sbjct: 435 TTEIYNSVL 443
>gi|255647669|gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 234/417 (56%), Gaps = 4/417 (0%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++R LS +D + L+ + G+ + K EL R V++LRK+RR++HALE+ +WM R
Sbjct: 30 LYRMLSALDITGGTVSQTLDQYIMEGKVIKKPELERCVEQLRKYRRFQHALEIIEWMEIR 89
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
F S S+ A+QLDL++K GV +AE+FF LP K+R YGALLN Y + M+ A
Sbjct: 90 KVNF--SWSNYAVQLDLVSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKA 147
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
D M + GY V +L +N +MTL+MK+ E +V +V MK++ I + ++Y+IW++S
Sbjct: 148 LSHFDTMDELGY-VTNLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNS 206
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
C S E V+E MK + W T+S +A++Y+K EKAE L+ +E ++ +
Sbjct: 207 CASSNDLGGAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEEQVKPK 266
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
R YH LL LY G EV+RVW+ +SV P VTN Y M+S+L R+ D+EG+ K F
Sbjct: 267 QRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVSP-VTNFSYLVMLSTLRRLNDMEGLTKCF 325
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+EW + SYD R+ ++ +S ++ + ++AE F P E + +++
Sbjct: 326 KEWEASCVSYDARLVSVCVSAHLNQNMLEEAELVFEEASRRSKGPFFRVREEFMKFFLKK 385
Query: 436 RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+ A+ L+ A + WRP P V FFK EEE+D+ + F + + +
Sbjct: 386 HELDAAVRHLEAALSEVKGDKWRPSPQVVGAFFKYYEEETDVDGVDEFSKIFKANNF 442
>gi|302142021|emb|CBI19224.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 222/365 (60%), Gaps = 1/365 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ + +VL +W G +T +L V ++L K +R+KHALE+ WM + RF++SA+D
Sbjct: 50 PRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWMEAQN-RFQMSAAD 108
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
AI+L+LI K+ +A AE++F LP++ + LL+AYV+ R AE L+ K+ D
Sbjct: 109 HAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALMLKLNDL 168
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G V P+N MM LYM +++ V +++ +MK+ I L+V SYN+W+S+C
Sbjct: 169 GLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEVSGLASA 228
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E V++ M DK V W+T ST+A +Y+K G ++KA +L+ E +++ +R+ Y +L++
Sbjct: 229 EMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRLGYFFLIT 288
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+Y S+ KEEV R+W + V +T+ Y ++ L ++GDI E+IF EW S Y
Sbjct: 289 MYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREWESKCWKY 348
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
D R++N+++ Y++ G+ DKAE+ +E GG PN +WE L EG ++ + + +A++ +
Sbjct: 349 DIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQNMDKAINAM 408
Query: 446 KGAFA 450
K F+
Sbjct: 409 KKGFS 413
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 238/415 (57%), Gaps = 2/415 (0%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
+++ K+S + +P L++W + G + EL R++ +LRK +R+ ALE+ +WM+
Sbjct: 40 SLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSK 99
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN 194
+G S ++ A+QLDLI +V G SAE +F SL + K + YGALLN YVR R
Sbjct: 100 KG-ICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDK 158
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
+ + KM++ G+A L YN +M LY + ++++V +++EMK+ + D +SY I ++
Sbjct: 159 SLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICIN 218
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
S G+Q + ME V + M+ + +W T++ A YIK G +KA E+L++ E R+
Sbjct: 219 SYGAQSDIQGMENVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDK 278
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
RD + Y++L+SLY S+G K EV R+W+L +S N Y M+ SL R+G++E EK+
Sbjct: 279 RDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKV 338
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
EW S + YD R+ N+++ Y ++G F+KAEA ++E+G SW T+A G++
Sbjct: 339 LREWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTPNSWGTVASGYMD 398
Query: 435 ERRILEALSCLKGAFAAE-GAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
E + +A+ C+K A + K +P + ++ + EAFV LR
Sbjct: 399 EGEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVEDVEAFVGSLR 453
>gi|326530906|dbj|BAK01251.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 226/392 (57%), Gaps = 2/392 (0%)
Query: 98 EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVH 157
+K G L EL R+VKELRK RR++ ALEV +WM+ +G R D A+ LDLI +VH
Sbjct: 82 DKPGNRLRPVELERIVKELRKRRRHRQALEVSEWMSAKGH-VRFLPKDYAVHLDLIGQVH 140
Query: 158 GVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
G+ +AE +F +LPD K + YGALLN Y R M + KM++ G+ SLPYN +
Sbjct: 141 GIGAAEAYFNTLPDKDKTEKPYGALLNCYTRELMVDGSLAHFQKMKELGFVFSSLPYNNL 200
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
M LY I ++++V S+++EMK GI D +SY I ++S G++ ME E M+ +
Sbjct: 201 MGLYTNIGQHEKVPSVIAEMKGSGIMPDNFSYRICINSYGTRADFFGMENTLEDMECEPQ 260
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
+ +W T++ +A+ YIK EKA +L++ E++I +D Y++L+SLYG +G K E+
Sbjct: 261 IVVDWNTYAVVASNYIKGNLREKAISALKKAEAKIDIKDSDTYNHLISLYGQLGDKSEMR 320
Query: 338 RVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
R+W L S N Y M++ L R+ +IE E + +EW S ++++D + N++++ Y
Sbjct: 321 RLWGLQMSNCKRHINKDYTTMLAMLVRLDEIEEAEALLKEWESSENAFDFHVPNVLLTGY 380
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS- 456
+ DKAEA + +++G P STSW +A G+ + +A +K A +S
Sbjct: 381 RHKDMLDKAEALLDDFLKKGKMPPSTSWAIVAIGYAEKGDCAKAYELIKNALCVYVPRSG 440
Query: 457 WRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
W P+P + K +E D+ E FV LL+
Sbjct: 441 WIPRPAMIEMILKYLGDEGDLKDVETFVQLLQ 472
>gi|255548417|ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545745|gb|EEF47249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 236/416 (56%), Gaps = 4/416 (0%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++ KLS + + LN+ G+++TK EL R ++ELRK+RR+ HA E+ +WM R
Sbjct: 40 LYHKLSALGATGGSVSRTLNEHIMEGKTITKIELSRCIRELRKYRRFDHAFEIMEWMEKR 99
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV-YGALLNAYVRARMRGN 194
F S +D AI+LDLI K G+A+AED+F L + K+ YGALLN Y + M
Sbjct: 100 KMNF--SYADRAIRLDLIGKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDK 157
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A L +M +K + SLP+N +M++YM++ + ++V +V EMK++ + ++YNIW+
Sbjct: 158 ALALFQEMDEKKFLYSSLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQ 217
Query: 255 SCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
S G + ++ V E++ N WTT+S +AT+Y+K G EKAE +L+++E+ +
Sbjct: 218 SYGCLNDFQGVDRVLREIVNDGGKDNLQWTTYSNLATIYLKAGIFEKAESALKKLEAIMG 277
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
R+R YH+L+S+Y G EV RVW L +S F + NL Y M+ +LA++ D+EG+ K
Sbjct: 278 FRNREAYHFLISIYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVEGVAK 337
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
F EW S ++YD RIAN+ + +++ +++AE F+ ++ P + E +
Sbjct: 338 CFREWESGCTNYDMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFKARERFMLFFL 397
Query: 434 RERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
+ ++ AL ++ AF+ W+P V +F E D+ E +L+
Sbjct: 398 KIHQLDLALKHMRAAFSESEKHEWKPLQETVNAYFDYFRTEKDVDGAEKLSKILKH 453
>gi|224138182|ref|XP_002322750.1| predicted protein [Populus trichocarpa]
gi|222867380|gb|EEF04511.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 237/410 (57%), Gaps = 12/410 (2%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
VL+ W + G ++ + + ++KELR++RRY HALE+ WM ++ L++ A++LDL
Sbjct: 65 VLDKWIQEGETIWEDLIHALIKELRQYRRYHHALEISMWMTDK-RYLALTSRAVAVRLDL 123
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
I+KVHG+ E++F ++P LK YGALLN Y + AE ++ +MR+ G+A L
Sbjct: 124 ISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAYVKSVEKAEAVMQRMRELGFARKPL 183
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
+ VM+ LY K ++++ ++ EM+E GI D ++Y I LSS + +E +E + +
Sbjct: 184 VFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCIRLSSYAAASDSEGLEKTLKRI 243
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR-VPYHYLLSLYGSVG 331
+ D V +W T++T+A Y K+G ++KA E L+R E ITG R PY YL++ Y + G
Sbjct: 244 ESDPNVVLDWATYATVANGYSKVGLLDKALEMLKRCERLITGERRSTPYDYLMTQYATTG 303
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
KE+V RVW L++ N+ ++I+SL + D+E EKIFEEW S K D I N
Sbjct: 304 TKEDVLRVWELHKRYVGNRKNI---SVITSLLKFDDLESAEKIFEEWESQKLCDDIIIPN 360
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
++ Y ++G +KAE + G KPN+ +W LA+G+++ + +A+ +K
Sbjct: 361 FLVDAYSRKGLLEKAEMLLQRTMSNGTKPNANTWYLLAKGYLQHNQTPKAVEAMKEMIVL 420
Query: 452 EGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSL 501
G +S RP V+ + + ++ DM + E F+ LLR EKD +SL
Sbjct: 421 SGPRS-RPSTVSWVACLQHLKDSGDMDNAEGFINLLR------EKDIISL 463
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/473 (32%), Positives = 270/473 (57%), Gaps = 27/473 (5%)
Query: 78 RKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGE 137
R LSL+ + + + W++ G S+ K+EL R+V+ELRK +RYKHALE+ +WM + E
Sbjct: 66 RLLSLVYTKR-SAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQ-E 123
Query: 138 RFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAEL 197
+L A D A+ LDLI+K+ G+ SAE FF +PD ++ +LL++YV+ ++ AE
Sbjct: 124 DIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEA 183
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL--DVYSYNIWLSS 255
L +KM + G+ LPYN M+++Y+ ++++V ++ E+K IR D+ +YN+WL++
Sbjct: 184 LFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK---IRTSPDIVTYNLWLTA 240
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
S E E V+ K +K +NP+W T+S + +Y K VEKA +LR +E ++ +
Sbjct: 241 FASGNDVEGAEKVYLKAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALREMEKLVSKK 299
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
+RV Y L+SL+ ++G K+ V W +S F + + Y +MIS++ ++G+ E + ++
Sbjct: 300 NRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLY 359
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+EW SV + D RI NL+++ Y+ E F+ I+E+G P+ ++WE L +++
Sbjct: 360 DEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKR 419
Query: 436 RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKAC---EEESDMGSKEAFVALLRQPGY 492
+ + + L C A + K W VNV AC EE+ ++ E + LL++ GY
Sbjct: 420 KDMEKVLDCFGKAI--DSVKKW---TVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGY 474
Query: 493 RKEKDYMSLIG----------LTDEAVAENNKKNDEDSDEDSEMLLSQLQFAE 535
+ Y SL+ + +E +A++N + DE++ E L SQ++ E
Sbjct: 475 VNTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELIR-LTSQMRVTE 526
>gi|356536682|ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 233/417 (55%), Gaps = 4/417 (0%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++R LS +D + L+ + G+ + K EL R V++LRK+RR++HALE+ +WM R
Sbjct: 30 LYRMLSALDITGGTVSQTLDQYIMEGKVIKKPELERCVEQLRKYRRFQHALEIIEWMEIR 89
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
F S S+ A+QLDL++K GV +AE+FF LP K+R YGALLN Y + M+ A
Sbjct: 90 KVNF--SWSNYAVQLDLVSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKA 147
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
D M + GY V +L +N +MTL+MK+ E +V +V MK++ I + ++Y+IW++S
Sbjct: 148 LSHFDTMDELGY-VTNLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNS 206
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
C S E V+E MK + W T+S +A++Y+K EKAE L+ +E ++ +
Sbjct: 207 CASSNDLGGAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEEQVKPK 266
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
R YH LL LY G EV+RVW+ +SV P VTN Y M+S+L R+ D+EG+ K F
Sbjct: 267 QRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVSP-VTNFSYLVMLSTLRRLNDMEGLTKCF 325
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+EW + SYD R+ ++ +S ++ + ++AE F P E + +++
Sbjct: 326 KEWEASCVSYDARLVSVCVSAHLNQNMLEEAELVFEEASRRSKGPFFRVREEFMKFFLKK 385
Query: 436 RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+ A+ L+ A + WRP P V F K EEE+D+ + +L+ +
Sbjct: 386 HELDAAVRHLEAALSEVKGDKWRPSPQVVGAFLKYYEEETDVDGVDELSKILKANNF 442
>gi|242057165|ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 158/432 (36%), Positives = 257/432 (59%), Gaps = 11/432 (2%)
Query: 76 IFRKLSLMDNPQLGSAS-VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWM-N 133
++R+LS + GS S VLN W + G + EL + VKELRK++R+ HALEV DWM N
Sbjct: 66 LYRRLSALGIAGEGSVSRVLNKWVREGGAPRSEELVKHVKELRKYKRHAHALEVMDWMVN 125
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
RG +S ++ AI+LDLI KV G+ +AE++F +LPD K+ R YGALL+ Y A+M
Sbjct: 126 ARG--MNMSITNHAIRLDLIYKVRGLEAAENYFANLPDPAKNHRTYGALLSCYCSAKMEE 183
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
A L +M + G+ +LP N +M+LYMK+ ++ +V+S+ EMK K I+ D + I +
Sbjct: 184 KATYLYRQMDELGFWSGTLPINNLMSLYMKLDQHRKVDSLFEEMKVKNIKPDSLTCCILM 243
Query: 254 SSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ S ++ K++ + EL+K V+K V+ W+ +ST+A++Y+ GQVEKAE +L+++E
Sbjct: 244 T---SYAASNKIDAIEELLKEMVEKDVSLGWSAYSTLASIYVNAGQVEKAESALKKLEGL 300
Query: 312 ITGRD-RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
I D R P+ +L+SLY S+G E+ RVW++ ++ F VTN+ Y M+ +L ++ DI+
Sbjct: 301 IGAEDGRQPFDFLMSLYASLGNLSEINRVWDVIKAKFSTVTNISYLGMLHALYKLNDIDR 360
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
M++I+ EW S +YD R+ N+M+ +++ G ++AE E+G + +S + E +
Sbjct: 361 MKQIYMEWESNYQTYDVRLTNMMIRGHLRLGMSEEAETLREKAKEKGVEFDSKTCELFLD 420
Query: 431 GHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQP 490
++ + + AL+ ++ K+ + + F K EE D S E F LR
Sbjct: 421 HYMGKGDMNSALNWVEN-MTKLPKKAGKLDQDRIYKFQKYFEEHKDADSAERFCNCLRML 479
Query: 491 GYRKEKDYMSLI 502
G K Y SL+
Sbjct: 480 GCIDGKAYESLL 491
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 263/458 (57%), Gaps = 26/458 (5%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+ W++ G S+ K+EL R+V+ELRK +RYKHALE+ +WM + E +L A D A+ LDL
Sbjct: 80 TIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQ-EDIKLQAGDYAVHLDL 138
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
I+K+ G+ SAE FF +PD ++ +LL++YV+ ++ AE L +KM + G+ L
Sbjct: 139 ISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCL 198
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL--DVYSYNIWLSSCGSQGSTEKMEGVFE 270
PYN M+++Y+ ++++V ++ E+K IR D+ +YN+WL++ S E E V+
Sbjct: 199 PYNHMLSMYISRGQFEKVPVLIKELK---IRTSPDIVTYNLWLTAFASGNDVEGAEKVYL 255
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
K +K +NP+W T+S + +Y K VEKA +L+ +E ++ ++RV Y L+SL+ ++
Sbjct: 256 KAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANL 314
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
G K+ V W +S F + + Y +MIS++ ++G+ E + +++EW SV + D RI
Sbjct: 315 GDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIP 374
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
NL+++ Y+ E F+ I+E+G P+ ++WE L +++ + + + L C A
Sbjct: 375 NLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAI- 433
Query: 451 AEGAKSWRPKPVNVINFFKAC---EEESDMGSKEAFVALLRQPGYRKEKDYMSLIG---- 503
+ K W VNV AC EE+ ++ E + LL++ GY + Y SL+
Sbjct: 434 -DSVKKW---TVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAK 489
Query: 504 ------LTDEAVAENNKKNDEDSDEDSEMLLSQLQFAE 535
+ +E +A++N + DE++ E L SQ++ E
Sbjct: 490 AGEMALIVEERMAKDNVELDEETKELIR-LTSQMRVTE 526
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 145/455 (31%), Positives = 261/455 (57%), Gaps = 16/455 (3%)
Query: 78 RKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGE 137
R LSL+ + + + W++ G S+ K+EL R+V+ELRK +RYKHALE+ +WM + E
Sbjct: 59 RLLSLVYTKR-SAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVLQ-E 116
Query: 138 RFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAEL 197
+L A D A+ LDLI+K+ G+ SAE FF LPD ++ +LL++YV+ ++ AE
Sbjct: 117 DIKLQAGDYAVHLDLISKIRGLNSAEKFFEDLPDQMRGHAACTSLLHSYVQNKLSDKAEA 176
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L +KM + G+ LPYN M+++++ ++++V ++ E+K K D+ +YN+WL++
Sbjct: 177 LFEKMGECGFLKSCLPYNHMLSMFISKGQFEKVSVLIKELKMK-TSPDIVTYNLWLTAFA 235
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
S E E V+ L + +NP+W T+S + +Y K +EKA+ +L+ +E ++ ++R
Sbjct: 236 SGNDVEGAEKVY-LKAKESKLNPDWVTYSVLTNLYAKTDNLEKAKLALKEMEKLVSKKNR 294
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
V Y L+SL+ ++G K+ V W RS F + + Y +MIS++ ++G+ E + +++E
Sbjct: 295 VAYASLISLHANLGDKDGVNLTWKKVRSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDE 354
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
W SV + D RI NL+++ Y+ E F+ I+E+G P+ ++WE L +++ +
Sbjct: 355 WESVSGTGDARIPNLILAEYMNRDEILLGEKFYERIVEKGINPSYSTWEILTWAYLKRKD 414
Query: 438 ILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKD 497
+ + L C + A + K W V K EE+ ++ E + LL++ G+ +
Sbjct: 415 LEKVLDCFEKAI--DSVKKWTVNVRLVKAVCKELEEQGNVKGAEKLMTLLQKAGHVNTQL 472
Query: 498 YMSLIG----------LTDEAVAENNKKNDEDSDE 522
Y SL+ + +E +A++N + DE++ E
Sbjct: 473 YNSLLRTYAKAGEMALIVEERMAKDNVELDEETKE 507
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 237/415 (57%), Gaps = 2/415 (0%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
+++ K+S + +P L++W + G + EL R++ +LRK +R+ ALE+ +WM+
Sbjct: 40 SLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSK 99
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN 194
+G S ++ A+QLDLI +V G SAE +F SL + K + YGALLN YVR R
Sbjct: 100 KG-ICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDK 158
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
+ + KM++ G+A L YN +M LY + ++++V +++EMK+ + D +SY I ++
Sbjct: 159 SLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSHVYPDNFSYRICIN 218
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
S +Q + ME V + M+ + +W T++ A YIK G +KA E+L++ E R+
Sbjct: 219 SYAAQSDIQGMEKVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDK 278
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
RD + Y++L+SLY S+G K EV R+W+L +S N Y M+ SL R+G++E EK+
Sbjct: 279 RDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKV 338
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
EW S + YD R+ N+++ Y ++G F+KAEA ++E+G SW T+A G++
Sbjct: 339 LREWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTPDSWGTVASGYMD 398
Query: 435 ERRILEALSCLKGAFAAE-GAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
E + +A+ C+K A + K +P + ++ + EAFV LR
Sbjct: 399 EGEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVEDVEAFVGSLR 453
>gi|297843032|ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335239|gb|EFH65656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 236/415 (56%), Gaps = 5/415 (1%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
+++KLS + A LN + G ++ K +L R K+LRKFRR++HALE++DWM R
Sbjct: 60 LYKKLSKLSVAGGTVAETLNQFIMEGITVRKVDLFRCAKDLRKFRRHQHALEIFDWMEKR 119
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRR-VYGALLNAYVRARMRGN 194
+ S SD AI+LDLIAK G+ +AE++F +L + K+ + YGAL+N Y G
Sbjct: 120 --KMTFSVSDHAIRLDLIAKAKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEGK 177
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ +KM + + +SLP+N MM++YM++ + ++V +V MK++GI +Y+IW+
Sbjct: 178 AKAHFEKMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQ 237
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
SCGS + +E + + M D W TFS +A ++ K G EKAE +L+ +E ++
Sbjct: 238 SCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIFTKAGLYEKAESALKSMEKKMNP 297
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
+R +H+L+SLY + K EVYRVW + P V NL Y M+ +++++GDI+G++KI
Sbjct: 298 NNRDSHHFLISLYAGISKGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKKI 357
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F EW S +YD R+AN+ ++ Y+K +++AE + +E+ P S + + L +
Sbjct: 358 FTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMEKSKGPFSKARQLLMIHLLE 417
Query: 435 ERRILEALSCLKGAFA--AEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALL 487
+ A+ L+ A + AE W V FF + D+ E F +L
Sbjct: 418 NGKADLAMKHLETAVSDPAENKDEWSWSSELVSLFFLHFKRAKDVDGAEDFCKIL 472
>gi|15225409|ref|NP_179663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206559|sp|Q9SKU6.1|PP166_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g20710, mitochondrial; Flags: Precursor
gi|4454477|gb|AAD20924.1| hypothetical protein [Arabidopsis thaliana]
gi|51315392|gb|AAT99801.1| At2g20710 [Arabidopsis thaliana]
gi|330251965|gb|AEC07059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 242/425 (56%), Gaps = 4/425 (0%)
Query: 69 PMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEV 128
P+ ++ + R+++ +P VL+ W G + EL ++K LRKF R+ HAL++
Sbjct: 33 PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92
Query: 129 YDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVR 188
DWM+ +S D AI+LDLIAKV G+ AE FF ++P ++ +YGALLN Y
Sbjct: 93 SDWMSEH-RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 151
Query: 189 ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYS 248
++ AE + +M++ G+ LPYNVM+ LY++ +Y VE ++ EM+++ ++ D+++
Sbjct: 152 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 211
Query: 249 YNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
N L + E ME + D+ ++ +W T++ A YIK G EKA E LR+
Sbjct: 212 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 271
Query: 309 ESRITGRDRV-PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD 367
E + + R Y L+S YG+ GKKEEVYR+W+LY+ + G N GY ++IS+L ++ D
Sbjct: 272 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDD 330
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
IE +EKI EEW + S +D RI +L+++ Y K+G +KAE N ++++ ++++WE
Sbjct: 331 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWER 390
Query: 428 LAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALL 487
LA G+ ++ +A+ K A WRP V +++ E + DM + LL
Sbjct: 391 LALGYKMAGKMEKAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449
Query: 488 RQPGY 492
+ G+
Sbjct: 450 SERGH 454
>gi|297809953|ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
gi|297318697|gb|EFH49119.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
Length = 500
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/463 (33%), Positives = 259/463 (55%), Gaps = 9/463 (1%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
++++KLS + LN G + K EL R K+LRKFR+ + ALE+++WM
Sbjct: 39 SVYKKLSSLGTRGGKMEETLNQLVMEGVPVKKHELIRYAKDLRKFRQPQRALEIFEWMER 98
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN 194
+ F + SD AI+LDLIAK G+ +AE +F SL D++K++ YG+LLN Y +
Sbjct: 99 KEIVF--TGSDHAIRLDLIAKTKGLEAAETYFNSLNDSIKNQSTYGSLLNCYCVEKEEDK 156
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ + M D + +SLP+N +M +Y++I + ++V ++V MK+K I +Y++W+
Sbjct: 157 AKAHFENMVDLNHVSNSLPFNNLMAMYLRIGQSEKVPALVVAMKQKNITPCDITYSMWIQ 216
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
SCGS + +E V + MK + +W TF+ +A +YIK+G +KAEE+L+ +E+++
Sbjct: 217 SCGSLKDLDGVEKVLDEMKAEGEGISSWDTFANLAAIYIKVGLYDKAEEALKSLENKMNP 276
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
R YH+L+SLY + EVYRVW+L + P V N Y M+ +L+++ DI+G++KI
Sbjct: 277 HIRDCYHFLISLYAGIANASEVYRVWDLLKKRHPNVNNSSYLTMLQALSKLNDIDGIKKI 336
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F EW S +YD R+AN+ +S Y+K+ +++AEA FN + + S + + L ++
Sbjct: 337 FTEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMTKCKGQFSKARQLLMMHLLK 396
Query: 435 ERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRK 494
+ AL + A + K+W + +FF EE D+ E F L +
Sbjct: 397 NDQADLALKHFEAA-VLDLDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLG 455
Query: 495 EKDYMSLIG--LTDEAVAENNKKNDEDS----DEDSEMLLSQL 531
+ Y L+ L+ E + KK E+ DE+ + LLS++
Sbjct: 456 SETYTLLMKTYLSAEKACPDMKKRLEEQGIQVDEEQDCLLSKI 498
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 252/458 (55%), Gaps = 8/458 (1%)
Query: 48 PVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSAS-VLNDWEKGGRSLTK 106
PV K + H VD + ++R+LS + N GS S VLN W + GR
Sbjct: 53 PVPKVASEAAHPVA-VDANKAVTKDSRPLYRRLSALGNAGEGSVSRVLNKWVREGREARS 111
Query: 107 WELCRVVKELRKFRRYKHALEVYDWM-NNRGERFRLSASDAAIQLDLIAKVHGVASAEDF 165
+L R VKELRK++R+ ALE+ DWM + +G +S ++ AI+LDL+ KV G+ +AE +
Sbjct: 112 VDLERYVKELRKYKRHAQALELMDWMVHTKG--MNMSYTNHAIRLDLVYKVRGIEAAEKY 169
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F LPD K+ R YGALLN Y ++ A L KM D G A +LP+N +M+LYMK+
Sbjct: 170 FNGLPDPAKNHRTYGALLNCYCSSKKEEKATDLFHKMDDLGIASSTLPFNNLMSLYMKLG 229
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++ +V + EMK K ++ D + + ++S + + +E V + M+ +K W+ +
Sbjct: 230 QHKKVAGLFEEMKAKNVKPDNLTCCVLMTSYAALNKIDAVEEVLKEME-EKNAALGWSAY 288
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRD-RVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
ST+A++Y+ G VEKAE +L+++E + RD R P+ +L+SLY SVG EV RVW++ +
Sbjct: 289 STLASIYVSAGLVEKAESALKKLEGLVQPRDGRQPFDFLMSLYASVGNLSEVNRVWDVVK 348
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ FP VTN Y +M+ +L ++ D + +++IFEEW S YD ++ N+M ++K G
Sbjct: 349 ATFPKVTNTSYFSMLQALYKLNDADRIKQIFEEWESNHECYDVKLTNIMTRAHLKNGLTK 408
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNV 464
+AE + +G +S + E + ++ + AL ++ K+ + +
Sbjct: 409 EAELLWEKAKAKGADFDSKTCELFLDHYMGTEDMKSALHWVENVTKLP-KKAGKLDQEKI 467
Query: 465 INFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
F K EE+ D+ E + LR G K Y SL+
Sbjct: 468 QKFSKYFEEQKDVQGAEKLCSCLRTLGCIDGKVYESLL 505
>gi|297832672|ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330058|gb|EFH60477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 240/425 (56%), Gaps = 4/425 (0%)
Query: 69 PMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEV 128
P+ ++ + R+++ +P VL+ W G + EL ++K LRKF R+ HAL++
Sbjct: 34 PLDPYDTLQRRVARAGDPSASIIRVLDGWLDQGHLVKTSELHGIIKMLRKFSRFSHALQI 93
Query: 129 YDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVR 188
DWM+ ++ D AI+LDLIAKV G+ AE FF ++P ++ +YGALLN Y
Sbjct: 94 SDWMSEH-RVHEITEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 152
Query: 189 ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYS 248
++ AE + +M++ G+ LPYNVM+ LY++ +Y VE ++ EM++ ++ D+++
Sbjct: 153 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDGTVKPDIFT 212
Query: 249 YNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
N L + + E ME + D ++ +W T++ A YIK G EKA E LR+
Sbjct: 213 VNTRLHAYSAVSDVEGMEKFLMRCEADTGLHLDWRTYADTANGYIKAGLTEKAIEMLRKS 272
Query: 309 ESRITGRDRV-PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD 367
E + R R Y L+S YG+ GKKEEVYR+W+LY+ + G N GY ++IS+L ++ D
Sbjct: 273 EQMVNPRKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDD 331
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
IE +EKI EEW + S +D RI +L+++ Y K+G +KAE N ++++ ++++WE
Sbjct: 332 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNMLVQKWRVEDTSTWER 391
Query: 428 LAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALL 487
LA G+ + +A+ K A WRP V +++ E DM S + LL
Sbjct: 392 LALGYKMAGEMEKAVEKWKRAIDV-SKPGWRPHQVVLMSCVDYLEGRRDMESLRKILRLL 450
Query: 488 RQPGY 492
+ G+
Sbjct: 451 SERGH 455
>gi|125536853|gb|EAY83341.1| hypothetical protein OsI_38557 [Oryza sativa Indica Group]
Length = 444
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 215/378 (56%), Gaps = 5/378 (1%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
L++ +WM + E RL D A+ LDL+AKV G+ SAE FF +P+ K ALL+
Sbjct: 24 CLQICEWMRTQPE-MRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLH 82
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
AYV+ R AE ++++M GY +LP+N MM+LYM E ++V M+ E++ I
Sbjct: 83 AYVQHGRRDKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP- 141
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
D+ +YNIWL+ C + S + E V++LMK D+ V P+W TFS + ++YI G K ++
Sbjct: 142 DLVTYNIWLTYCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDA 200
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
L +E R + ++R Y LL+LY S+ + + RVW R F ++ Y M++SL R
Sbjct: 201 LVEMEKRASRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTR 260
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
GDI E + EW S + D RI N ++++Y+K G +KAE F + I+++G KP+ ++
Sbjct: 261 FGDIAEAESFYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYST 320
Query: 425 WETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFV 484
WE G++ + R+ + L CLK A + + W P P + EE+ D+ + E +
Sbjct: 321 WELFVWGYLSDGRMDKVLECLKKALSC--LEKWDPNPQLATAIYSQIEEKGDIEAAEKLL 378
Query: 485 ALLRQPGYRKEKDYMSLI 502
+ R+ GY + Y S++
Sbjct: 379 VMFREAGYVTTEIYNSVL 396
>gi|449434959|ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Cucumis sativus]
gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Cucumis sativus]
Length = 489
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 220/396 (55%), Gaps = 3/396 (0%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
LN + K + + KWE+ +++LR + Y AL++ + M RG + SD AI LDL+
Sbjct: 45 LNKFIKSHKRVFKWEVGDTLRKLRDRKLYYPALKLSEIMAKRG--MNKTVSDQAIHLDLV 102
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
AK G+ +AE++F+SLP++ K+ Y +LLN Y + + AE L +K+++ V +P
Sbjct: 103 AKARGIDAAENYFVSLPESSKNHLSYSSLLNCYCKELLTEKAEALFEKIKELNLPVTPVP 162
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN +MTLY KI D+V +++ EMK + D Y+Y +W+ + + +E V + MK
Sbjct: 163 YNSLMTLYSKIGRPDKVCTIIQEMKAANVTFDPYTYIVWMRALAALNDISGVERVIDEMK 222
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D V +WTT+S +A++Y+ EKA ++L+ +E T RD + + +L++LYG +G
Sbjct: 223 RD-GVKGDWTTYSNLASIYVNANMFEKAAKALKDLEKINTRRDLIGFQFLITLYGQIGDL 281
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
EVYRVW R FP N+ Y MI +L ++ D+ G EK F+EW S +YD RI N +
Sbjct: 282 TEVYRVWRSLRLAFPRTANISYLNMIQTLTKLKDLPGAEKCFKEWESGSPTYDIRIPNAL 341
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG 453
+ Y K G +KA A + G +PN+ +WE +++ A C+ A
Sbjct: 342 IGAYTKGGLLEKAMALKERALRRGARPNAKTWEFFLNYYLKNGDFKLAGDCVAKAIGKGD 401
Query: 454 AKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
W P P + +F E+E D+ E+F+ ++++
Sbjct: 402 RGKWIPSPEIIKSFMSHFEQEKDVDGAESFLEIVKK 437
>gi|242096946|ref|XP_002438963.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
gi|241917186|gb|EER90330.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
Length = 502
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 221/382 (57%), Gaps = 2/382 (0%)
Query: 108 ELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFL 167
+L R+VKELR RR++ ALEV +WMN +G + D A+ LDLI +HGV +AE +F
Sbjct: 85 DLRRIVKELRTRRRHRQALEVSEWMNLKG-HVKFLPKDHAVHLDLIGHIHGVGAAETYFN 143
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
+L D K + YGALLN Y R R+ A KM++ G+ +LPYN +M+LY I+++
Sbjct: 144 NLSDKDKTEKPYGALLNCYTRERLVDKALAHFQKMKELGFVFTALPYNNLMSLYTNIEQH 203
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
+ V S+++EMK GI D +SY I ++S G++ +E E M+ + + +W T++
Sbjct: 204 ERVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFGLENTLEEMECEPQIVVDWNTYTV 263
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+A+ YIK EKA +L++ E+++ +D Y +L+SLYG +G K EV R+W + S
Sbjct: 264 VASQYIKGDLREKAYSALKKAEAKMGIKDLAAYRHLISLYGHLGDKSEVKRLWAVQMSNC 323
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
N Y +++ L ++ +I E + +EW + K+ +D ++ N++++WY ++G DKAE
Sbjct: 324 QRHLNTDYTNILAVLVKLDEIAEAEDLLKEWETSKNEFDFKVPNVLLTWYCQKGLLDKAE 383
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS-WRPKPVNVIN 466
A + + +G P STSWE +A G+ + + A K A S W P+P +
Sbjct: 384 ALLDGFLIKGKMPPSTSWEIVASGYTEKGDVARAYELTKNALYMYAPNSGWVPEPSMIEM 443
Query: 467 FFKACEEESDMGSKEAFVALLR 488
K +E ++ EAF+ LL+
Sbjct: 444 ILKYLGDEREVKDVEAFIDLLK 465
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 227/388 (58%), Gaps = 4/388 (1%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ +FR++ +P+ VL+ W + GR + + +L ++K+LRKF R+ AL++ +W+
Sbjct: 36 DTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLRKFGRFNQALQLCEWVR 95
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
N + LS D A++L LI+K G+ AE +F S+ ++ +D +VYGALL+ YV +
Sbjct: 96 NERNQC-LSTGDIAVELHLISKARGLEQAEKYFSSIGESSRDHKVYGALLHCYVENKNLK 154
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE ++ KMR+ G+ L YN M+ LY + +++++ ++ EM+E GI D ++YNI +
Sbjct: 155 KAEAIMQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRM 214
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
++ + ME + M+ D V +W T+ + Y K G E + L++ E I
Sbjct: 215 NAYAAASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFIG 274
Query: 314 GRDR-VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
+ + + Y YL++LY ++G K+EVYRVWNLY ++ N GY +ISSL ++ DI+G E
Sbjct: 275 DKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLRKRF-NSGYLCIISSLMKLDDIDGAE 333
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+I +EW S +S+D RI N+M++ Y +G DKAEA+ N +IE G +P + +W+ LA G+
Sbjct: 334 RILKEWESGDTSFDFRIPNMMINSYCMKGFVDKAEAYINRLIETGKEPEANTWDLLASGY 393
Query: 433 IRERRILEALSCLKGAFAAEGAKSWRPK 460
+ LK A + W+PK
Sbjct: 394 HSNGLTNKVAETLKKAISV-SPPHWKPK 420
>gi|343172214|gb|AEL98811.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 207/349 (59%), Gaps = 8/349 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGA 181
Y AL++ D M +G ++ SD AI LDLI K HGVA+AE++F+ LP++ K+ YGA
Sbjct: 1 YYAALKLSDTMAWKG--MNMTISDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGA 58
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LLN Y + + AE L++KM++ G + ++ YN +MTLY K ++V ++V EMK
Sbjct: 59 LLNIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASD 118
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
I L Y+YN+W+ + + +E V + MK D V +WTT+S +A++Y++ EKA
Sbjct: 119 IMLQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFEKA 178
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
E +L+ +E R T +D PY +LL+LYG G EVYRVW R FP N+ Y MI
Sbjct: 179 ENALKELEKRNTSQDLSPYQFLLTLYGKTGNLIEVYRVWRSLRLAFPKTPNVAYLNMIQR 238
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L + D++G EK F +W S ++YD RIAN++M Y+K+G +A+ + G KPN
Sbjct: 239 LVTLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGLLQQAKELKKRACKRGAKPN 298
Query: 422 STSWETLAEGHIRERRILEALSCLKGAFA---AEGAKSWRP--KPVNVI 465
+ +WE E +++ + A+ C++ A A +G+K W P K VN I
Sbjct: 299 AKTWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSK-WVPSSKVVNSI 346
>gi|224125490|ref|XP_002329818.1| predicted protein [Populus trichocarpa]
gi|222870880|gb|EEF08011.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 237/417 (56%), Gaps = 5/417 (1%)
Query: 75 AIFRKLS-LMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
++ KLS L P L L+ W + G+ + EL R++ + R +R+ HAL+V +WMN
Sbjct: 31 TLYSKLSPLGSTPSLEPE--LDSWIQNGKKVKVAELQRIIHDFRMRKRFTHALQVSEWMN 88
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+G S S A+QLDLI +VHG SAE++F +L D K+ + YGALLN YV+ R
Sbjct: 89 KKGICI-FSPSQHAVQLDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVQKRETD 147
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
+ + KM++ G+A SL YN +M LY + ++++V +++EMKE + D +SY + +
Sbjct: 148 KSISHLQKMKEMGFAKSSLSYNDIMCLYTNVGQHEKVPQVLNEMKENNVSPDNFSYRLCM 207
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+S G++G E ME + M+ + +W +++ A+ YIK G +KA +SL++ E+R+
Sbjct: 208 NSYGARGDLEGMEKMLNEMEHQPDIVVDWNSYAVAASSYIKGGLTDKAIDSLKKSETRLD 267
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
+D Y++L+SLY ++G+K EV R+W+L +S N Y +++SL ++ + E +EK
Sbjct: 268 KKDGTGYNHLISLYATLGEKTEVLRLWDLEKSTCERPINKDYINIMASLVKLDEFEEVEK 327
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
+ +EW + + YD R+ N ++ Y +G ++KA+A ++ E+G W +A G
Sbjct: 328 VLKEWEASGNFYDVRVPNTLIIGYSGKGLYEKAKALLENLTEKGKATLPNIWGKVAAGFF 387
Query: 434 RERRILEALSCLKGAFAA-EGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
+ + +A SC+K A E K W+P + +E EAFV+ L+
Sbjct: 388 DKNEVAKAFSCMKAALCLYEENKEWKPNQKVITGILSWLGDEGSAEDAEAFVSSLKN 444
>gi|343172216|gb|AEL98812.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 211/357 (59%), Gaps = 7/357 (1%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGA 181
Y AL++ D M +G ++ +D AI LDLI K HGVA+AE++F+ LP++ K+ YGA
Sbjct: 1 YYAALKLSDTMAWKG--MNMTINDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGA 58
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LLN Y + + AE L++KM++ G + ++ YN +MTLY K ++V ++V EMK
Sbjct: 59 LLNIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASD 118
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
I L Y+YN+W+ + + +E V + MK D V +WTT+S +A++Y++ +KA
Sbjct: 119 IMLQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFDKA 178
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
E +L+ +E R T R+ PY +LL+LYG G EVYR+W R FP N+ Y MI
Sbjct: 179 ENALKELEKRNTSRELSPYQFLLTLYGKTGNLIEVYRLWRSLRLAFPKTPNVAYLNMIQR 238
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L + D++G EK F +W S ++YD RIAN++M Y+K+G+ +A+ + G KPN
Sbjct: 239 LVTLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGSLQQAKELKKRACKRGAKPN 298
Query: 422 STSWETLAEGHIRERRILEALSCLKGAFA---AEGAKSWRPKPVNVINFFKACEEES 475
+ +WE E +++ + A+ C++ A A +G+K W P NV+N E+S
Sbjct: 299 AKTWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSK-WVPS-TNVVNSIMGHFEQS 353
>gi|224121672|ref|XP_002330624.1| predicted protein [Populus trichocarpa]
gi|222872228|gb|EEF09359.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 241/402 (59%), Gaps = 10/402 (2%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+++ R++S++++P + V+ W + G+ +T +L +++LRK R+ HAL++ WM+
Sbjct: 33 HSLNRRISMVEDPMVPVIPVIEKWVQEGQVVTNSDLKHFIRKLRKIHRFSHALQISQWMS 92
Query: 134 N-RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
+ RG LS D A++LDLI+KVHG+ A +F S+P++L+ VYGALLN Y +
Sbjct: 93 DQRGHN--LSPGDVAVRLDLISKVHGLEQAVTYFNSVPESLRGLEVYGALLNCYAHYKHL 150
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
AE + KMR+ G+ + L YNVM+ LY ++ +Y++++ ++ EM++ GI +Y I
Sbjct: 151 EEAEATMRKMREMGFVRNVLSYNVMLNLYYQMGKYEKIQVLMQEMEKWGICFSNITYKIL 210
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
L++ + + E+++ + M+ D V+ +W + A Y+K G ++K L R E I
Sbjct: 211 LNAYVATSNIEEIKKILMKMEADPLVSIDWYAYVVAANGYLKAGLIDKTLTMLWRSEQLI 270
Query: 313 TGRD-RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
+G+ R LLSLY +VG KE+VYRVWNLY++ + N Y MI+SL ++ D++G
Sbjct: 271 SGKSARFACETLLSLYTAVGNKEQVYRVWNLYKTKGRSL-NSSYLCMINSLLKLDDVDGA 329
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
E+I+EEW+S+ +D RI N+M+S Y K+G ++KAEAF I+ G K +++ + LA G
Sbjct: 330 ERIWEEWVSIVKFFDIRIPNVMVSAYSKKGLWEKAEAFVGKIVASGIKIEASTLDRLATG 389
Query: 432 HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
+ ++L+A +K A + W+P + AC E
Sbjct: 390 YHVRGQMLKASETIKKAISI-SQPGWKPN----VYTLAACLE 426
>gi|449438486|ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 243/434 (55%), Gaps = 13/434 (2%)
Query: 75 AIFR-KLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
AI R K+ + P++ VL W GR++ K EL +V ++ RR+ HALE+ WM
Sbjct: 36 AILRQKIVNIRAPKISVVPVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMT 95
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+R LS SDAA++LDLI VHG+ AE++F S+ LK VYGALL YVR +
Sbjct: 96 DR-RYLSLSPSDAAVRLDLIHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLE 154
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE ++ +MR G A S YNV++ LY +I ++D+++ ++ EMK KGI D+YS
Sbjct: 155 KAEAIMQEMRKMGIATTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLC 214
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI- 312
++ ++ ME + + ++ D + +WT +S A Y+ G +A L++ E ++
Sbjct: 215 AAYVAKADISGMEKILKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKVR 274
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
++ + +LLSLY G K EVYRVWN ++ + T + Y MI+SLA++ DIEG E
Sbjct: 275 PNTNKFAFKFLLSLYERTGHKNEVYRVWNTFKPLTKE-TCVPYALMITSLAKLDDIEGAE 333
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+IF+EW S + YD R+ N ++ Y ++G DKAE+ N + E P ++W LA G+
Sbjct: 334 RIFQEWESKCTVYDFRVLNRLLVAYCRKGLLDKAESVVNQAVVE-RTPFRSTWSILATGY 392
Query: 433 IRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKAC----EEESDMGSKEAFVALLR 488
+ +A+ LK A G ++W+PK +++ +AC E++ D + + V L +
Sbjct: 393 AEYGHMSKAVEMLKKAILV-GRQNWKPKQGDIL---EACLDYLEKQGDAETMDEIVRLCK 448
Query: 489 QPGYRKEKDYMSLI 502
G ++ Y L+
Sbjct: 449 SSGTVMKEMYYRLL 462
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 235/402 (58%), Gaps = 10/402 (2%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ +FR++ +P+ VL+ W + GR + + +L +++K+LR F R+ HAL++ +W
Sbjct: 36 DTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFNHALQLCEW-- 93
Query: 134 NRGERFRL-SASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
R ER + S AIQL LI+K G+ AE++F S+ ++ +D +VYGALL+ YV +
Sbjct: 94 ERNERNKCPSPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYVENKNL 153
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
AE ++ KMR+ G+ L YN M+ LY ++ ++++++ +V EM+E GI + ++YN+
Sbjct: 154 KKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVR 213
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+++ + ME + M+ D V +W + T+ Y K G E + L++ E I
Sbjct: 214 MNAYAAASDITNMEKLLSKMEADPLVATDWHIYFTVGNGYFKAGLSENSISMLKKAEQLI 273
Query: 313 TGRDR-VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
+ + + Y YL++LY ++G K+EVYRVWNLY ++ N GY +ISSL ++ DI+G
Sbjct: 274 GDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLQKRF-NSGYLCIISSLMKLDDIDGA 332
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
E+I +EW S +S+D +I N+M++ Y +G DKAEA+ + +IE G +P + +W+ LA G
Sbjct: 333 ERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASG 392
Query: 432 HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
+ +A LK A + + W+P + AC E
Sbjct: 393 YHSNGLTNKAAETLKKAISVSPPR-WKPN----YDILAACLE 429
>gi|357146877|ref|XP_003574143.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brachypodium distachyon]
Length = 511
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 223/392 (56%), Gaps = 2/392 (0%)
Query: 98 EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVH 157
+K G L EL R+VKELRK RR++ ALEV +WM+ +G + D A+ LDLI +VH
Sbjct: 82 DKPGNRLRPVELERIVKELRKRRRHRQALEVSEWMSAKG-LVKFLPKDHAVHLDLIGQVH 140
Query: 158 GVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
GV +AE +F L D K + YGALLN Y R + + KM++ G+ SLPYN +
Sbjct: 141 GVGAAEAYFNKLADKDKTEKPYGALLNCYTRELLVDKSLAHFQKMKELGFVFSSLPYNNL 200
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
M LY + ++++V S+++EMK GI D +SY I ++S G++ ME E M+ +
Sbjct: 201 MGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGARADFFGMENTLEEMECEPQ 260
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
+ +W T++ +A YIK +KA +L++ E++I +D Y++L+SLYG +G K EV
Sbjct: 261 IVVDWNTYAVLANNYIKGNLRDKAISALQKAEAKIDIKDSDTYNHLMSLYGQLGDKSEVK 320
Query: 338 RVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
R+W L S N Y M++ L ++ +IE E + +EW S ++++D + N++++ Y
Sbjct: 321 RLWALQMSNCKRHINKDYTTMLAMLLKLDEIEEAEALLKEWESSENAFDFHVPNVLLTGY 380
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS- 456
++ DKAEA + +++G P STSW +A G+ + + +A K A S
Sbjct: 381 RQKDLLDKAEALLDDFLKKGKMPTSTSWAIVAIGYAEKGDVAKAYELTKNALCVYAPNSG 440
Query: 457 WRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
W P+P + K +E ++ E FV LL+
Sbjct: 441 WIPRPAMIEMILKYLGDECNLKDVETFVHLLQ 472
>gi|115473169|ref|NP_001060183.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|34393591|dbj|BAC83218.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113611719|dbj|BAF22097.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|215706491|dbj|BAG93347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 224/391 (57%), Gaps = 2/391 (0%)
Query: 99 KGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHG 158
K G L EL R+VKELRK RR++ ALEV +WMN +G + D A+ LDLI ++HG
Sbjct: 89 KPGNRLRHVELERIVKELRKRRRHRQALEVSEWMNAKGH-VKFLPKDHAVHLDLIGEIHG 147
Query: 159 VASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
++AE +F +LPD K + YGALLN Y R + + KM++ G+ +LPYN +M
Sbjct: 148 SSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQKMKELGFVFSTLPYNNIM 207
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
LY + ++++V S+++EMK GI D +SY I ++S G++ ME E M+ + +
Sbjct: 208 GLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFGMENTLEEMECEPKI 267
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
+W T++ +A+ YIK EKA +L++ E++I +D Y++L+SLYG +G K EV R
Sbjct: 268 VVDWNTYAVVASNYIKGNIREKAFSALKKAEAKINIKDSDSYNHLISLYGHLGDKSEVNR 327
Query: 339 VWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
+W L S N Y M++ L ++ +IE E + +EW S +++D ++ N++++ Y
Sbjct: 328 LWALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEWESSGNAFDFQVPNVLLTGYR 387
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS-W 457
++ DKAEA + +++G P STSW +A G+ + +A K A + W
Sbjct: 388 QKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGYAEKGDAAKAYELTKNALCVYAPNTGW 447
Query: 458 RPKPVNVINFFKACEEESDMGSKEAFVALLR 488
P+P + K +E D+ E FV LL+
Sbjct: 448 IPRPGMIEMILKYLGDEGDVEEVEIFVDLLK 478
>gi|115436124|ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|215694668|dbj|BAG89859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 248/431 (57%), Gaps = 7/431 (1%)
Query: 75 AIFRKLSLMDNPQLGSAS-VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWM- 132
+++R+LS + GS S V+N W + GR +L + VKELRK++R+ HALE+ +WM
Sbjct: 56 SLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMV 115
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
N +G +S ++ AI+LDLI KV G+ +AE +F LPD K+ + YGALLN Y A+M
Sbjct: 116 NTKG--MNMSYTNHAIRLDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGALLNCYCSAKME 173
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
A + KM + G + +LP N +M+LY+KI ++ +V S+ EMK K ++ D + +
Sbjct: 174 DKATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLL 233
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+SS + + + V + M+ +K V W+ +ST+A++Y+ VE+AE +L+++ES I
Sbjct: 234 MSSYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLI 292
Query: 313 -TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
R P+ +L+SLY SVG EV RVWNL ++ F VTN Y M+ +L ++ D + M
Sbjct: 293 DVQAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRM 352
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
++I+E+W S +YD R+ N+M +++ G +AE + + E+G + +S + E E
Sbjct: 353 KQIYEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEH 412
Query: 432 HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPG 491
++ + + AL+ ++ KS + + F K EE D+ E F+ LR G
Sbjct: 413 YMGKGDMTSALNWVENMTKLPRKKS-KLDQEKISCFLKYFEEHKDVEGAERFLNCLRTSG 471
Query: 492 YRKEKDYMSLI 502
K Y SL+
Sbjct: 472 CIDGKAYESLL 482
>gi|223974825|gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 250/432 (57%), Gaps = 11/432 (2%)
Query: 76 IFRKLSLMDNPQLGSAS-VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWM-N 133
++R+LS + + GS S VLN W + G + +L + VKELRK++R+ HALE+ DWM N
Sbjct: 50 LYRRLSALGSAGEGSVSRVLNKWVREGGATRSDDLVKHVKELRKYKRHAHALELMDWMVN 109
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
RG +S ++ AI+L+LI KV G+ +AE++F +LPD K+ R YG+LL+ Y A+M
Sbjct: 110 ARG--MNMSHTNHAIRLELIYKVRGLEAAENYFANLPDPAKNHRTYGSLLSCYCSAKMEE 167
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
A L +M + G +LP N +M+LYMK+ +Y +V S+ EMK K ++ + + I +
Sbjct: 168 KATNLYRQMDELGIWSSTLPINNLMSLYMKLDQYRKVVSLFEEMKLKNVKPNSLTCCILM 227
Query: 254 SSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+S + K++ + EL+K V+K V W+ +ST+A++Y+ GQ KAE +L+++E
Sbjct: 228 TS---YAALNKIDDIEELLKEMVEKDVTLGWSAYSTLASIYVNAGQFGKAESALKKLEGL 284
Query: 312 ITGRD-RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
I+ D R P+ +LLSLY S+G EV RVWN+ +S F VTN Y M+ +L ++ DI+
Sbjct: 285 ISAHDDRQPFDFLLSLYASLGNLSEVNRVWNVIKSKFSKVTNTSYLGMLHALYKLNDIDR 344
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
M++I+ EW S ++D ++ N+M+ ++K G ++AE + E G + ++ + E +
Sbjct: 345 MKQIYMEWESNYETFDVKLTNMMIRSHLKVGMTEEAEMLVEKVKENGAEFDTKTCELFLD 404
Query: 431 GHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQP 490
++ + AL+ L+ K+ + + F K EE D E F LR
Sbjct: 405 HYMGTEDMNSALNWLEN-MTKLSKKAEKLDQDRIYKFQKYFEEHKDADGAERFCNCLRTL 463
Query: 491 GYRKEKDYMSLI 502
G K Y SL+
Sbjct: 464 GCIDGKAYESLL 475
>gi|357442213|ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 233/417 (55%), Gaps = 4/417 (0%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++R+L+ ++ + LN + G++L K EL R V+ELRK+RR+ HA E+ +WM R
Sbjct: 92 LYRRLADLEKTGGTVSQTLNQYIIEGKALGKDELERCVQELRKYRRFHHAFEIMEWMMMR 151
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
F S + A+ LDL++KV GV AE+ F S P K++ YG+LLN Y + M A
Sbjct: 152 QINF--SWDNYAVYLDLVSKVKGVVEAENHFNSFPPPAKNKYTYGSLLNCYCKELMLDKA 209
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
DKM + GY + SL + +M++YM++ + +V +V+ MKE+ IR+ ++Y +W++S
Sbjct: 210 LSHFDKMDEFGY-LTSLSFTNLMSMYMRLSQPSKVPQLVNVMKERKIRMTEFTYILWMNS 268
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
C + ++E V+E MK + +W T+S +A +YIK G EKAE L++VE + R
Sbjct: 269 CAALNDLGEVERVYEEMKREDEDKIDWKTYSNLAAIYIKAGFFEKAELMLKKVEGVMKPR 328
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
R YH+LLSLY G +EVYRVW + + P VTN Y M+S+L R+ D+EG+ K+F
Sbjct: 329 QRETYHFLLSLYAGTGNVKEVYRVWGTLKKITP-VTNRSYLIMLSNLRRLNDMEGIIKLF 387
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+EW S SYD R+ + + Y+ + +A F ++ P E + +
Sbjct: 388 KEWESRHVSYDSRLVGVAVQAYLSQNMDKEAVLVFEEALKSCRGPFFRIREMFMASLLEK 447
Query: 436 RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
++ A+S L+ A + ++P P V F K EEE+D+ + +LR +
Sbjct: 448 GQLDGAMSHLEAALSEASDYKYQPSPQVVSAFLKYYEEETDLDGVDELSKILRSHNF 504
>gi|22328859|ref|NP_680735.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146702|sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21705, mitochondrial; Flags: Precursor
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis thaliana]
gi|28827500|gb|AAO50594.1| unknown protein [Arabidopsis thaliana]
gi|332659092|gb|AEE84492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 144/467 (30%), Positives = 252/467 (53%), Gaps = 9/467 (1%)
Query: 71 IKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYD 130
+K ++ K+S + +P+ L +W + G+ ++ EL R+V +LR+ +R+ HALEV
Sbjct: 22 VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSK 81
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WMN G S ++ A+ LDLI +V+G +AE++F +L + K+ + YGALLN YVR +
Sbjct: 82 WMNETGVCV-FSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQ 140
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
+ L +KM++ G+ SL YN +M LY I ++++V ++ EMKE+ + D YSY
Sbjct: 141 NVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYR 200
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
I +++ G+ E++ G M+ + + +W T++ A YI G ++A E L+ E+
Sbjct: 201 ICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSEN 260
Query: 311 RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
R+ +D Y++L++LY +GKK EV R+W+L + V N Y ++ SL +I +
Sbjct: 261 RLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVE 320
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
E++ EW S + YD R+ N ++ Y+ + +KAEA + G SWE +A
Sbjct: 321 AEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVAT 380
Query: 431 GHIRERRILEALSCLKGAFAAE-GAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
+ + + A C+K A E G++ WRP V + +E + E+FVA LR
Sbjct: 381 AYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRN 440
Query: 490 PGYRKEKDYMSLI-------GLTDEAVAENNKKNDEDSDEDSEMLLS 529
++ Y +L+ G + + + K + + DE++ ++LS
Sbjct: 441 CIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILS 487
>gi|326502008|dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 244/430 (56%), Gaps = 7/430 (1%)
Query: 76 IFRKLSLMDNPQLGSAS-VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWM-N 133
++R+LS + N GS S VLN W + GR +L R VKELR+++R+ ALE+ DWM +
Sbjct: 86 LYRRLSALGNAGEGSVSAVLNKWLREGRETRSVDLERYVKELRRYKRHSQALELMDWMVH 145
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+G +S ++ AI+LDLI KV G+ +AE +F LPD K+ R +GALLN Y ++
Sbjct: 146 TKG--MNMSYTNHAIRLDLIYKVRGLEAAEKYFEGLPDPAKNHRTFGALLNCYCSSKEEE 203
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
A L KM + G + +LP N +M+LYMK+ ++ +V S+ EMKEK ++ D + I +
Sbjct: 204 KATDLYRKMDELGISSSTLPINNLMSLYMKLGQHKKVCSLFEEMKEKNVKPDNLTCCILM 263
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+S + + +E V + M+ V W+ +ST+A++Y G VEKAE +L+++E +
Sbjct: 264 TSLAALNKIDDVEQVLKEMEEKDGV-LGWSAYSTLASIYQSAGLVEKAESALKKLEGLVQ 322
Query: 314 GRD-RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
RD R P+ +L+SLY SVG EV RVW + ++ FP VTN Y +M+ +L ++ D + M+
Sbjct: 323 DRDGRQPFDFLMSLYASVGNLSEVKRVWGVVKATFPKVTNTSYFSMLQALLKLNDADYMK 382
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
++FEEW S YD ++ N+M ++K G +AE + E+G +S + E + +
Sbjct: 383 QVFEEWESNHEFYDAKLTNVMTRAHLKNGMAKEAELLWEKAKEKGACFDSKTCELFLDHY 442
Query: 433 IRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+ + AL+ ++ K+ + + F K EE+ D+ E F LR G
Sbjct: 443 MVAGDMKSALNWVENVTKLP-KKTAKLDQDKIPKFSKYFEEQKDVQGAERFCRCLRALGC 501
Query: 493 RKEKDYMSLI 502
K Y SL+
Sbjct: 502 IDGKAYESLL 511
>gi|449523946|ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 245/418 (58%), Gaps = 13/418 (3%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++R++S + +P + +L+ W GR + + EL ++KELR ++R+KHALE+ WM+++
Sbjct: 31 LYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDK 90
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
F LS +D AI+++LI +VHG+ ED+F ++P LK +V+ ALLN Y + A
Sbjct: 91 -RYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKA 149
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
+ K+++ G+A LPYN+MM LY +I E++ ++S++ EMKE+G+ D ++Y+I +S+
Sbjct: 150 NAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISA 209
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
+ +E + E M+ + ++ +W + A Y K+G ++K+ L++ E +
Sbjct: 210 YAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLLANV 269
Query: 316 DR--VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
+ ++ L LY GKK+E++R+WNLY+ + N G+ +MI+SL + DI+G E+
Sbjct: 270 KKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITSLLILDDIKGAER 327
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
I++EW + K SYD RI NL++ Y + G +KAE N ++ K + SW LA G++
Sbjct: 328 IYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGYL 387
Query: 434 RERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKAC--EEESDMGSKEAFVALLRQ 489
++ ++ +A+ LK A S P +N + A + + D+ E V LLR+
Sbjct: 388 QKDQLPQAVETLK------LAASVCPSRLNYVKEILAAFLDGKQDVEETEKVVNLLRE 439
>gi|224130976|ref|XP_002320971.1| predicted protein [Populus trichocarpa]
gi|222861744|gb|EEE99286.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 235/414 (56%), Gaps = 5/414 (1%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++++LS + + LND+ G K +L ++ELRK+ R+ +A+EV +WM R
Sbjct: 15 LYKRLSELGASGESVSKTLNDFVLEGGKTNKVDLLACIRELRKYGRFDYAIEVMEWMQKR 74
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
+++ S A + LDLIAK G+A+AE++F L + ++ +GALL+ Y R M A
Sbjct: 75 ----KMNVSHA-VYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKA 129
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
L +KM + + SLP+N +++L++++ + ++V +V EMK+KG+ ++YN+W+ S
Sbjct: 130 LTLFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQS 189
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
G E +E V + MK+D N +WTT++ +AT+Y+K G +KAE +L++VE +I
Sbjct: 190 YGCLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEEQIERD 249
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
R YH+L++LY EV RVWN +S F TN+ Y M+ +LA++ D+EG+ K F
Sbjct: 250 YREAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCF 309
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+EW S SYD R+AN+ + ++ +++A F+ ++ + E ++
Sbjct: 310 KEWESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVFFLKN 369
Query: 436 RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
++ AL +K AF+ W+P+P V FF E+E D+ E +L+
Sbjct: 370 HQLDLALKHMKAAFSEVKEIEWQPEPKTVSAFFAYFEDEKDVNGAERLCKILKH 423
>gi|388517969|gb|AFK47046.1| unknown [Lotus japonicus]
Length = 496
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 239/419 (57%), Gaps = 5/419 (1%)
Query: 85 NPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSAS 144
+P+ A +LN W +GG +T+ +L R++ L FRR+ HAL+V +WM+N + LS+
Sbjct: 45 DPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNE-RNYDLSSG 103
Query: 145 DAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD 204
A ++ LI+KVHG+ AEDFF +PD + ++Y +LL+ Y + AE ++ K+++
Sbjct: 104 LIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLEEAEAIMKKIKE 163
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
++ YN+++ LY + +Y++++ ++ EMKE + + ++ I L++ + E
Sbjct: 164 LRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDL-CNGATFTIRLNAYVAAKDVEG 222
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD-RVPYHYL 323
ME + M+ D +W T+ST A Y+K G VEKA +L++ E + G+ R+ Y L
Sbjct: 223 MEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESL 282
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
S Y ++G K+EVYR+WN +++ N Y M+SSL ++ D +G EKI EW S
Sbjct: 283 QSTYAAIGNKDEVYRLWNRIKNL-QNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHK 341
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
++D RI NLM++ Y K G DKAEA+ +++ G K + +SW+ +A G+ + + +A+
Sbjct: 342 NFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQ 401
Query: 444 CLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
+K A A WRP P ++ +E+ D+ S + L ++ G+ K Y L+
Sbjct: 402 TMKKAILA-NRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHIKITTYDGLV 459
>gi|356526773|ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 230/423 (54%), Gaps = 8/423 (1%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
A++ KL + QL LN++ K + + KWE+ +K+LR + Y+ AL++ + M
Sbjct: 24 ALYMKLFKDGSSQLIVRQSLNNFVKSRKRVYKWEVGDTLKKLRDRKLYQPALKLSETMAK 83
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN 194
R + SD AI LDL+AK G+ +AE++F+SLP+ K+ YGALLN Y + M
Sbjct: 84 RN--MIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPSKNHLCYGALLNCYCKELMTEK 141
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
+E L++KM++ + S+PYN +MTLY K+ + +++ S++ EMK + LD Y+YN+W+
Sbjct: 142 SEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSLIQEMKASNVMLDSYTYNVWMR 201
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ + +E V + MK V +WTT+S +A++++ G +KAE +L+ +E R
Sbjct: 202 ALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFVDAGLFDKAEVALKELEKRNAF 261
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
+D Y +L++LYG G EVYRVW R FP N+ Y MI L + D+ G EK
Sbjct: 262 KDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPGAEKC 321
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F EW +YD R+AN+++ YVK +KAE G KPN+ + E + ++
Sbjct: 322 FREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERARRRGAKPNAKTLEIFMDYYLL 381
Query: 435 ERRILEALSCLKGAFAA--EGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ--- 489
+ A+ L A + + W P + + E+E D+ E F+ +L++
Sbjct: 382 KGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHFEQEKDVDGAEEFLEILKKSVE 441
Query: 490 -PG 491
PG
Sbjct: 442 SPG 444
>gi|125525544|gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 248/431 (57%), Gaps = 7/431 (1%)
Query: 75 AIFRKLSLMDNPQLGSAS-VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWM- 132
+++R+LS + GS S V+N W + GR +L + VKELRK++R+ HALE+ +WM
Sbjct: 56 SLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMV 115
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
N +G +S ++ AI+LDLI KV G+ +AE +F LPD K+ + YGALLN Y A+M
Sbjct: 116 NTKG--MNMSYTNHAIRLDLIYKVRGIEAAELYFAGLPDPGKNHKTYGALLNCYCSAKME 173
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
A + KM + G + +LP N +M+LY+KI ++ +V S+ EMK K ++ D + +
Sbjct: 174 DKATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLL 233
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+SS + + + V + M+ +K V W+ +ST+A++Y+ VE+AE +L+++ES I
Sbjct: 234 MSSYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLI 292
Query: 313 -TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
R P+ +L+SLY SVG EV RVWNL ++ F VTN Y M+ +L ++ D + M
Sbjct: 293 DVQAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRM 352
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
++I+E+W S +YD R+ N+M +++ G +AE + + E+G + +S + E E
Sbjct: 353 KQIYEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEH 412
Query: 432 HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPG 491
++ + + AL+ ++ KS + + F K EE D+ E F+ LR G
Sbjct: 413 YMGKGDMTSALNWVENMTKLPRKKS-KLDQEKISCFLKYFEEHKDVEGAERFLNCLRTSG 471
Query: 492 YRKEKDYMSLI 502
K Y SL+
Sbjct: 472 CIDGKAYESLL 482
>gi|449431834|ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
gi|449478158|ref|XP_004155237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
Length = 492
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 235/392 (59%), Gaps = 5/392 (1%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++ ++S + +P+ VLN W + GR++ +EL R+V++LR RRY+ ALEV +WM ++
Sbjct: 48 LYARISPLGDPECTVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQALEVSEWMCSK 107
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
G F L+ D AIQLDLI +V G+ SAE +F S+ + + ++YGALLN YVR + +
Sbjct: 108 G-LFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKS 166
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
+ KM++ G A L YN +M LY+ + D+V +++SEMKE G+ D +SY I +SS
Sbjct: 167 LAHMQKMKEMGLASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISS 226
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
G++ ME V + M+ ++ +WTT+S +A +IK G +KA LR+ E ++
Sbjct: 227 YGARSDVISMENVLKEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKVD-E 285
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
D + +++L+S Y ++G K EV R+W L + + N Y M+ SL ++ +E E +
Sbjct: 286 DALGFNHLISHYTNLGHKNEVMRLWALLKKGKKQL-NRDYITMLGSLVKLELLEEAENLV 344
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
EW S YD R+ N+++ Y ++G +KAE +II G P+ SW +A G++ +
Sbjct: 345 MEWESSCQCYDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEK 404
Query: 436 RRILEALSCLKGAFAAEGA-KSWRPKPVNVIN 466
+ + +A C+K A A +G K WRPKP NV++
Sbjct: 405 QNLEKAFECMKEALAVKGQNKVWRPKP-NVLS 435
>gi|18411800|ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01990, mitochondrial; Flags: Precursor
gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|332656708|gb|AEE82108.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 502
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 260/467 (55%), Gaps = 10/467 (2%)
Query: 72 KWNAIFRKLSLMDNPQLGSAS-VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYD 130
K +I++KLS + G LN + G + K +L R K+LRKFR+ + ALE+++
Sbjct: 37 KHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFE 96
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WM + F + SD AI+L+LIAK G+ +AE +F SL D++K++ YG+LLN Y +
Sbjct: 97 WMERKEIAF--TGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEK 154
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
A+ + M D + +SLP+N +M +YM + + ++V ++V MKEK I +Y+
Sbjct: 155 EEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYS 214
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
+W+ SCGS + +E V + MK + +W TF+ +A +YIK+G KAEE+L+ +E+
Sbjct: 215 MWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLEN 274
Query: 311 RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
+ R YH+L++LY + EVYRVW+L + +P V N Y M+ +L+++ DI+G
Sbjct: 275 NMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDG 334
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
++K+F EW S +YD R+AN+ +S Y+K+ +++AEA FN +++ S + + L
Sbjct: 335 VKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMM 394
Query: 431 GHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQP 490
++ + AL + A + K+W + +FF EE D+ E F L +
Sbjct: 395 HLLKNDQADLALKHFEAAVLDQD-KNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKW 453
Query: 491 GYRKEKDYMSLIGL---TDEAVAENNKKNDEDS---DEDSEMLLSQL 531
+ Y L+ +A + K+ +E DE+ E LLS++
Sbjct: 454 SPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLLSKI 500
>gi|4558568|gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
gi|7268583|emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 260/467 (55%), Gaps = 10/467 (2%)
Query: 72 KWNAIFRKLSLMDNPQLGSAS-VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYD 130
K +I++KLS + G LN + G + K +L R K+LRKFR+ + ALE+++
Sbjct: 36 KHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFE 95
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WM + F + SD AI+L+LIAK G+ +AE +F SL D++K++ YG+LLN Y +
Sbjct: 96 WMERKEIAF--TGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEK 153
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
A+ + M D + +SLP+N +M +YM + + ++V ++V MKEK I +Y+
Sbjct: 154 EEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYS 213
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
+W+ SCGS + +E V + MK + +W TF+ +A +YIK+G KAEE+L+ +E+
Sbjct: 214 MWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLEN 273
Query: 311 RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
+ R YH+L++LY + EVYRVW+L + +P V N Y M+ +L+++ DI+G
Sbjct: 274 NMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDG 333
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
++K+F EW S +YD R+AN+ +S Y+K+ +++AEA FN +++ S + + L
Sbjct: 334 VKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMM 393
Query: 431 GHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQP 490
++ + AL + A + K+W + +FF EE D+ E F L +
Sbjct: 394 HLLKNDQADLALKHFEAAVLDQD-KNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKW 452
Query: 491 GYRKEKDYMSLIGL---TDEAVAENNKKNDEDS---DEDSEMLLSQL 531
+ Y L+ +A + K+ +E DE+ E LLS++
Sbjct: 453 SPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLLSKI 499
>gi|293331503|ref|NP_001168643.1| uncharacterized protein LOC100382430 [Zea mays]
gi|223949857|gb|ACN29012.1| unknown [Zea mays]
gi|413933913|gb|AFW68464.1| hypothetical protein ZEAMMB73_255812 [Zea mays]
Length = 500
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 240/432 (55%), Gaps = 17/432 (3%)
Query: 66 ERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKW-ELCRVVKELRKFRRYKH 124
ER P + ++ L + +P + W R+L + EL R+VKELRK RR++
Sbjct: 38 ERPPPARSLSLDSTLFPLGHPSTLLVPEIELWAARPRNLLRAVELQRIVKELRKRRRHRQ 97
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
ALEV +WM+ +G + D AI LDLI ++HGV +AE +F +L D K + YGALLN
Sbjct: 98 ALEVSEWMSLKG-HVKFLPKDHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLN 156
Query: 185 AYVRARMRGNAELLIDK-------MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y R ELL+DK M++ G+ +LPYN +M LY +I +++ V S+++EM
Sbjct: 157 CYTR-------ELLVDKALAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEM 209
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K GI D +SY I ++S G++ +E E M+ + + +W T++ +A+ YIK
Sbjct: 210 KSNGIVPDNFSYRICINSYGTRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGDL 269
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
EKA +L + E+++ +D Y +L+SLYG++G K E R+W + S N Y
Sbjct: 270 REKAYSALSKAEAKLDKQDPDAYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMN 329
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
M+S L ++ +I E + +EW S ++S+D R+ N++++ Y ++ DKAE + +++G
Sbjct: 330 MLSVLVKLDEITEAEDLLKEWESSQNSFDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKG 389
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS-WRPKPVNVINFFKACEEESD 476
P STSW +A G+ + + +A K A + + W P+P + K +E +
Sbjct: 390 KTPPSTSWGIVAIGYAEKGDVAKAYEMTKNALSVHAPNTGWIPRPSMLEMILKYLGDEGE 449
Query: 477 MGSKEAFVALLR 488
+ EAFV+LL+
Sbjct: 450 VKDVEAFVSLLK 461
>gi|15217734|ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein [Arabidopsis thaliana]
gi|332189300|gb|AEE27421.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 139/415 (33%), Positives = 231/415 (55%), Gaps = 5/415 (1%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
+++KLS++ A LN + G ++ K +L R K LRKFRR +HA E++DWM R
Sbjct: 73 LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR 132
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRR-VYGALLNAYVRARMRGN 194
+ S SD AI LDLI K G+ +AE++F +L + K+ + YGAL+N Y
Sbjct: 133 --KMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEK 190
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ + M + + +SLP+N MM++YM++ + ++V +V MK++GI +Y+IW+
Sbjct: 191 AKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQ 250
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
SCGS + +E + + M D W TFS +A +Y K G EKA+ +L+ +E ++
Sbjct: 251 SCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNP 310
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
+R +H+L+SLY + K EVYRVW + P V NL Y M+ +++++GD++G++KI
Sbjct: 311 NNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKI 370
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F EW S +YD R+AN+ ++ Y+K +++AE + +++ P S + + L +
Sbjct: 371 FTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLE 430
Query: 435 ERRILEALSCLKGAF--AAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALL 487
+ A+ L+ A +AE W V FF E+ D+ E F +L
Sbjct: 431 NDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKIL 485
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 229/429 (53%), Gaps = 2/429 (0%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
+++ K+S + NP VL+DW G L EL R++++LRK R+ AL++ +WM+N
Sbjct: 22 SLYSKISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRIIRDLRKRSRFSQALQISEWMHN 81
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN 194
+G S ++ A+ LDLI KVHG +SAE +F +L D K + YGALLN YVR R
Sbjct: 82 KGVCI-FSPTEYAVHLDLIGKVHGFSSAETYFDALKDQHKTNKTYGALLNCYVRQRQTDK 140
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A + KM+D G+A L YN +M LY I ++++V ++ EMK+ + D +SY I ++
Sbjct: 141 ALSHLQKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVLREMKQNQVLPDNFSYRICIN 200
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
S G + +E V + M+ + +W T+S A YIK G A +LR+ E R+
Sbjct: 201 SYGVRSDFGGVERVLKEMETQPNIVMDWNTYSIAANFYIKAGLTRDAVCALRKSEERLDN 260
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
+D Y++L+SLY +G K EV R+W+L ++ N + ++ SL ++G+++ EKI
Sbjct: 261 KDGQGYNHLISLYAQLGLKNEVMRIWDLEKNACKRCINRDFTTLLESLVKLGELDEAEKI 320
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+EW S + YD I ++++ Y ++G +KA A + + W +A G+I
Sbjct: 321 LKEWESSDNCYDFGIPSIVIIGYSQKGLHEKALAMLEELQNKEKVTTPNCWSIVAGGYIH 380
Query: 435 ERRILEALSCLKGAFAAE-GAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYR 493
+ + +A C K A + K W+P + + + + E V+LLR
Sbjct: 381 KGEMEKAFKCFKTALSLYVENKGWKPNAKVIAELLRWIGDNGSVEDAEVLVSLLRNAVPV 440
Query: 494 KEKDYMSLI 502
+ Y +LI
Sbjct: 441 NRQMYHTLI 449
>gi|224077120|ref|XP_002305141.1| predicted protein [Populus trichocarpa]
gi|222848105|gb|EEE85652.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 224/396 (56%), Gaps = 2/396 (0%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
L+ W + G + EL R++ +LRK +R+ HAL+V +WM+ + + S S+ A+QLDLI
Sbjct: 49 LDSWVRSGNKVRVAELQRIIHDLRKRKRFSHALQVSEWMHKK-DICIFSPSEHAVQLDLI 107
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
+VHG SAE++F +L D K+ + YGALLN YVR R + L + KM++ G+A SL
Sbjct: 108 GRVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVRQRETDKSILHLQKMKEMGFAKSSLT 167
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN +M LY + ++++V +++EMKE + D +SY + ++S G++ E ME + M+
Sbjct: 168 YNDIMCLYTNVGQHEKVPQVLNEMKENNVLPDNFSYRLCINSFGARDDLEGMEKILNEME 227
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ +W T++ A YI +KA ++L++ E+R+ +D Y++L+SLY +G K
Sbjct: 228 HQPDIVMDWNTYAVAANFYIIGDLTDKAIDTLKKSEARLDKKDGTGYNHLISLYAKLGNK 287
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
EV R+W+L +S N Y M+ SL ++ + E EK+ +EW S + YD R+ N +
Sbjct: 288 TEVLRLWDLEKSACERHINKDYIIMMESLLKLSEFEEAEKMLKEWESSGNFYDVRVPNTL 347
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAE- 452
+ Y ++G +KA+A ++ E+G SW +A G + + +A SC+K A
Sbjct: 348 IIGYSRKGLCEKAKALLENLTEKGKMTLPNSWGIVAAGFFDKSEVAKAFSCMKAALCLYV 407
Query: 453 GAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
K W+P + +E EAFV+ L+
Sbjct: 408 ENKGWKPNQRVINGILSWLGDEGSAEDAEAFVSSLK 443
>gi|17529324|gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 231/415 (55%), Gaps = 5/415 (1%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
+++KLS++ A LN + G ++ K +L R K LRKFRR +HA E++DWM R
Sbjct: 73 LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR 132
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRR-VYGALLNAYVRARMRGN 194
+ S SD AI LDLI K G+ +AE++F +L + K+ + YGAL+N Y
Sbjct: 133 --KMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEK 190
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ + M + + +SLP+N MM++YM++ + ++V +V +K++GI +Y+IW+
Sbjct: 191 AKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAIKQRGISPCGVTYSIWMQ 250
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
SCGS + +E + + M D W TFS +A +Y K G EKA+ +L+ +E ++
Sbjct: 251 SCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNP 310
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
+R +H+L+SLY + K EVYRVW + P V NL Y M+ +++++GD++G++KI
Sbjct: 311 NNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKI 370
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F EW S +YD R+AN+ ++ Y+K +++AE + +++ P S + + L +
Sbjct: 371 FTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLE 430
Query: 435 ERRILEALSCLKGAF--AAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALL 487
+ A+ L+ A +AE W V FF E+ D+ E F +L
Sbjct: 431 NDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKIL 485
>gi|147766620|emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 236/422 (55%), Gaps = 19/422 (4%)
Query: 71 IKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYD 130
I+ ++++ ++ + +P+ + +LN W + G++++K +L +V+ ++ FRR+ HALE+
Sbjct: 19 IQISSLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQ 78
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WM +R F L+ SDAAI+LDLI+ V P T YGALL+ YVR +
Sbjct: 79 WMTDR-RYFTLTPSDAAIRLDLISMV-------------PWTXAGXDAYGALLSGYVREK 124
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
AE + KMR+ +A S PYN+++ LY + + ++E+++ EM+ K I D ++
Sbjct: 125 SVEKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQXKAIPCDAFTVX 184
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
+ + + ME M+ D ++ +W +S A+ Y+K+G ++KA E L+++ES
Sbjct: 185 NLMVAYVAASDISAMEKXLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIES 244
Query: 311 RITGRDRV-PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
+R + LLSLY K+E+YRVWNLY+ + Y MI+ L ++ DIE
Sbjct: 245 NRPHLERXSAFKXLLSLYARTXHKQELYRVWNLYKPSYEYPE--AYSCMITCLTKLDDIE 302
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
G EKIF+EW + YD R+ N ++S Y K FDKAE+ N +IEE P +++W LA
Sbjct: 303 GAEKIFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEE-RMPYASTWNILA 361
Query: 430 EGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
+G++ ++++ +A+ LK A + G K WRP + + + E + ++ E L +
Sbjct: 362 KGYVEDKQMPKAVEMLKKAISV-GRKGWRPNSIILDACIEYLEGQGNLEEIEEIARLCKN 420
Query: 490 PG 491
G
Sbjct: 421 LG 422
>gi|224064562|ref|XP_002301516.1| predicted protein [Populus trichocarpa]
gi|222843242|gb|EEE80789.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/440 (32%), Positives = 233/440 (52%), Gaps = 15/440 (3%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++R+LS + + LN+ G +K L +K+LRK+ R+ HA+EV +WM R
Sbjct: 1 MYRRLSELGASGGSVSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEWMQKR 60
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
F S D A+ LDL AK G+A+AE++F +LP ++++ Y LLN Y + M A
Sbjct: 61 KMNF--SHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEKA 118
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
L +KM S+P+N +MTL+M++ + ++V +V EMK++G+ ++YNIW+ S
Sbjct: 119 LTLFEKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQS 178
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI-TG 314
G E ++ V + MK D N +WTT+S +AT+Y+K G +KAE +LR++E +I G
Sbjct: 179 YGCLNDFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQIECG 238
Query: 315 R------------DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
R DR YH+L+SLY EV+RVWN +S F TN+ Y ++ +L
Sbjct: 239 RDCDFQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQAL 298
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
A++ D+EG+ K F+EW S SYD +AN+ + ++ +++A + F+ ++
Sbjct: 299 AKLKDVEGILKCFKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFF 358
Query: 423 TSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEA 482
+ E ++ + AL +K AF+ W+P V F E+ D+ E
Sbjct: 359 KAREMFMVFFLKNHQPDLALKHMKAAFSEAKEIEWQPDQKTVSAFLNYFEDGKDVDGAER 418
Query: 483 FVALLRQPGYRKEKDYMSLI 502
+ +Q Y+ L+
Sbjct: 419 LCKIWKQINRLNSNAYILLL 438
>gi|255553773|ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542909|gb|EEF44445.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 251/460 (54%), Gaps = 11/460 (2%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++ ++ ++ +P+ VLN W G ++ K L +V ++ ++R+ HALE+ WM +
Sbjct: 50 LYDRIQIVRDPKESIIPVLNQWVSEGHTVGKALLQSLVHLMKGYKRFNHALEMSHWMTD- 108
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
F LS SD A++L+LI +V+G A AE +F + D LK VYGALL+ YVR A
Sbjct: 109 CRYFSLSPSDVAVRLELIYRVYGSAHAEMYFEKISDKLKSGNVYGALLSGYVRENSVQKA 168
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
E ++ +MR+KG A S PYN+M+ LY + +++++ + EM+ GI D Y+ +++
Sbjct: 169 EAVLQEMREKGIATSSFPYNIMINLYAQNGAFEKIDILKEEMERNGIPQDKYTMRNLMAA 228
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI-TG 314
+ ME + ++ + W +S A+ Y+K+G +EKA + LR++E + G
Sbjct: 229 YVAASDISGMERILNQLETHPQLGHGWQAYSVAASGYLKVGLIEKALKMLRKMEETMPIG 288
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
+ ++YLL+LY G+K+E+YRVWN Y+ + V + MISSL ++ DIEG E+I
Sbjct: 289 KKTSAFNYLLTLYAKTGRKDELYRVWNSYKPL-AEVKETQFCCMISSLEKVDDIEGAERI 347
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
FEEW S YD R+ N ++ Y ++G + KAEA EG P +++W T+A +I
Sbjct: 348 FEEWESQCMMYDFRVLNKLLLAYCRKGLYTKAEA-AFKKAAEGRTPYASTWITMAMSYIG 406
Query: 435 ERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRK 494
+ ++ +A+ LK A + K W+P P+ + EE+ D+ E V L+
Sbjct: 407 QNQMSKAVEMLKKAISV-SRKGWKPNPITLTTCLDYLEEQGDVEGIEEIVKSLKSTESLT 465
Query: 495 EKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLL 528
Y L+ G+ V + K ++ +DE++ +L
Sbjct: 466 RDIYHRLVRTYTAAGIPVTKVIDKMKMDNIAADEETHKIL 505
>gi|255545872|ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 228/410 (55%), Gaps = 2/410 (0%)
Query: 83 MDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLS 142
+ +P L S+L W G +T +L + L K +RYKHALE++ WM + + FR+S
Sbjct: 38 LKSPGLNITSILQKWIDNGHKVTVSQLRYINGLLVKSKRYKHALEIFTWMETQ-KNFRMS 96
Query: 143 ASDAAIQLDLIAKVHGVASAEDFFLSLP-DTLKDRRVYGALLNAYVRARMRGNAELLIDK 201
SD A++L+LI KV+G+ AE++F +P D++ + ALL+ YV+ + AE L+ K
Sbjct: 97 VSDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAASFALLHGYVKVKDVVKAEALMMK 156
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
+ + G V+ P+N MM LYM +Y++V ++ +MK I L++ SYN+W+SS G
Sbjct: 157 LYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRNKIALNLLSYNLWMSSYGEVSK 216
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
K+E V++ M D V W+T +T+A +Y K G V+KA +L+ E ++ + Y
Sbjct: 217 VVKVELVYKEMVNDDNVEVGWSTLATLANIYTKAGIVDKALLALKNAEKILSTSHLLGYF 276
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+L++ Y S+ KE V R+W + V +T Y ++S L ++GD+ EK+F +W
Sbjct: 277 FLMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCVLSCLVKVGDLLEAEKVFRDWELN 336
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
YD R++N+++ YV++G +KAE+ ++ GG PN + E L EG ++ +++ +A
Sbjct: 337 CRKYDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGGCPNYKTLEILMEGWVKSQKMDKA 396
Query: 442 LSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPG 491
+ + A + WRP +++ + E + F+ ++ G
Sbjct: 397 IDAMTQAISMLEHCHWRPSHGIIMSIAEHLERNRNFEDANHFIQVIHHLG 446
>gi|147819856|emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 240/430 (55%), Gaps = 5/430 (1%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
+++ KLS + + A L+ W K G+S+ ++++ V +LR+F++YKHA ++Y+WM
Sbjct: 30 SLYWKLSALRGTEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYEWM-- 87
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN 194
+ L+ +D AI++DL+AK G+A AE++F SL ++ K + YGALLN Y + M
Sbjct: 88 EKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMVDK 147
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A L K+++ + +L YN M++LY+++ + ++V S+V EM+EK I D+Y+YN+ ++
Sbjct: 148 AVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMN 207
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
S S E +E V E MK + V +W T+ +A +Y+ G +KA +L+++E
Sbjct: 208 SYASVKDFEAVEQVLEKMK-KRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNL 266
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
D + L++LY E V R W + P + N Y M+ +L+++GD+ G+EK
Sbjct: 267 HDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKC 326
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F+EW S S+YD R++N+M+ Y+ ++A SI + G + + + + +++
Sbjct: 327 FKEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESIAKRGPELKLKTLDLFMKFYLK 386
Query: 435 ERRILEALSCLK-GAFAAEGAKS-WRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+ ++ A+ L GA A+ + W P + F + EE D+ S E F +R+
Sbjct: 387 KHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMRKISR 446
Query: 493 RKEKDYMSLI 502
K Y SL+
Sbjct: 447 LDSKIYDSLL 456
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 233/437 (53%), Gaps = 9/437 (2%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
I RK + P+ S+L + G +++ EL + K L + RY AL++ +WM N+
Sbjct: 44 ILRK----NGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQ 99
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV----YGALLNAYVRARM 191
+ S D A++LDLI K HG+ E++F L + RV Y LL AYV+ +M
Sbjct: 100 KD-IEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKM 158
Query: 192 RGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
AE L++K+ G+ V P+N MM LY +Y++V +VS MK I +V SYN+
Sbjct: 159 VKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNL 218
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
W+++C +E V++ M DK+V W++ T+A +YIK G EKA L E
Sbjct: 219 WMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKM 278
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
+ +R+ Y +L++LY S+G KE V R+W + +SV ++ + Y ++SSL + GD+E
Sbjct: 279 LNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEA 338
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
E++F EW + +YD R++N+++ YV+ G KAE+ ++E GG PN +WE L EG
Sbjct: 339 ERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEG 398
Query: 432 HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPG 491
++ + +A+ + F WRP V+ + E+E + A+V L + G
Sbjct: 399 WVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLG 458
Query: 492 YRKEKDYMSLIGLTDEA 508
Y L+ + + A
Sbjct: 459 LASLPLYRLLLRMHEHA 475
>gi|242096944|ref|XP_002438962.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
gi|241917185|gb|EER90329.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
Length = 503
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 219/391 (56%), Gaps = 2/391 (0%)
Query: 99 KGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHG 158
+ G+ L EL VVK+LR+ R++ ALEV +WMN +G + D A+ LDLI +HG
Sbjct: 76 RSGKRLRPCELHFVVKDLRRRHRHRQALEVSEWMNLKG-HVKFLPKDHAVHLDLIGHIHG 134
Query: 159 VASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
V +AE +F +L D K + YGALL Y R + A KM++ G+ LPY+ +M
Sbjct: 135 VGAAETYFNNLSDKDKTEKPYGALLYCYTRECLVDKALAHFQKMKELGFVFTPLPYSNLM 194
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
LY +++++ V S+++EMK GI + +SYNI +++ G++ +E E M+ V
Sbjct: 195 ILYANVEQHERVPSVMAEMKSNGIVPNNFSYNICINAYGTRADFSGLENTLEEMEFASQV 254
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
+W T++ +A+ YIK EKA +L++ E+++ +D Y +L+SLYG +G K E+ R
Sbjct: 255 VVDWRTYADVASHYIKGDLREKAYSALQKAEAKMDEKDSFAYSHLISLYGHLGDKSEIKR 314
Query: 339 VWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
+W L G N GY M++ L ++ +I E + ++W S K+ +D ++ N+++ Y
Sbjct: 315 LWVLQMLKCKGCINKGYKYMLTVLVKLDEIAEAEDLLKKWESSKNEFDFKVPNILLKGYC 374
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS-W 457
+ G DKAEA + + +G KP++TSW +A + + + A K A + S W
Sbjct: 375 QWGLLDKAEALLDGFLRKGKKPSATSWAIVASAYAEKGDVPRAYELTKRALSMCVPDSGW 434
Query: 458 RPKPVNVINFFKACEEESDMGSKEAFVALLR 488
P+P + K +E ++ EAF+ LL+
Sbjct: 435 IPEPSMIEVILKYLGDEGEVKDVEAFIDLLK 465
>gi|225450579|ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 240/430 (55%), Gaps = 5/430 (1%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
+++ KLS + + A L+ W K G+S+ ++++ V +LR+F++YKHA ++Y+WM
Sbjct: 34 SLYWKLSALRGTEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYEWM-- 91
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN 194
+ L+ +D AI++DL+AK G+A AE++F SL ++ K + YGALLN Y + M
Sbjct: 92 EKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMLDK 151
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A L K+++ + +L YN M++LY+++ + ++V S+V EM+EK I D+Y+YN+ ++
Sbjct: 152 AVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMN 211
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
S S E +E V + MK + V +W T+ +A +Y+ G +KA +L+++E
Sbjct: 212 SYASVKDFEAVEQVLDKMK-KRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNL 270
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
D + L++LY E V R W + P + N Y M+ +L+++GD+ G+EK
Sbjct: 271 HDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKC 330
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F+EW S S+YD R++N+M+ Y+ ++A SI + G + + + + +++
Sbjct: 331 FKEWESGCSTYDVRLSNVMLESYLNREIIEEANLLSESIAKRGPELKLKTLDLFMKFYLK 390
Query: 435 ERRILEALSCLK-GAFAAEGAKS-WRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+ ++ A+ L GA A+ + W P + F + EE D+ S E F +R+
Sbjct: 391 KHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMRKISR 450
Query: 493 RKEKDYMSLI 502
K Y SL+
Sbjct: 451 LDSKIYDSLL 460
>gi|242034057|ref|XP_002464423.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
gi|241918277|gb|EER91421.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
Length = 496
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 219/389 (56%), Gaps = 16/389 (4%)
Query: 108 ELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFL 167
EL R+V+ELRK R++ ALEV +WMN +G + D AI LDLI +VHGV +AE +F
Sbjct: 79 ELQRIVRELRKRHRHRQALEVSEWMNLKGH-VKFLPKDHAIHLDLIGQVHGVGAAETYFN 137
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK-------MRDKGYAVHSLPYNVMMTL 220
+L D K + YGALLN Y R ELL+DK M++ G+ +L YN +M L
Sbjct: 138 NLSDKDKTEKPYGALLNCYTR-------ELLVDKALAHFQNMKELGFVFSALSYNNLMGL 190
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
Y I +++ V +++EMK GI D +SY I ++S G + +E E M+ + +
Sbjct: 191 YTNIGQHERVPMVMAEMKRDGIVPDNFSYRICINSYGIRADFFGLENTLEEMECEPQIVV 250
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
+W T++ +A+ YIK EKA +LR+ E+++ +D Y +L+SLYG +G K EV R+W
Sbjct: 251 DWNTYAVVASNYIKGYLREKAYSALRKAEAKMDKKDGDAYGHLISLYGHLGDKLEVKRLW 310
Query: 341 NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
L+ N Y M++ L ++ +I E + +EW S K+++D ++ N++++ Y ++
Sbjct: 311 ALHMLNCKRYINKDYTNMLAVLVKLDEITEAEDLLKEWESSKNAFDFQVPNVLLTGYRQK 370
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS-WRP 459
G DKAE + +++G P STSW +A G+ + + +A K A + S W P
Sbjct: 371 GLLDKAETLLDGFLKKGKTPTSTSWWIVAIGYAEKGDVAKAYELTKNALSVFAPNSGWIP 430
Query: 460 KPVNVINFFKACEEESDMGSKEAFVALLR 488
+P + K E ++ EAFV LL+
Sbjct: 431 RPSIIEMILKYLGNEGEVKDVEAFVNLLK 459
>gi|115457716|ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa Japonica Group]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|125543501|gb|EAY89640.1| hypothetical protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 217/423 (51%), Gaps = 41/423 (9%)
Query: 106 KWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF 165
KWE+ V+ LRK Y+ AL++ + M RG + SD AI+LDL+AK G+A+AE +
Sbjct: 51 KWEVGVCVRRLRKQALYRPALKLSEVMARRG--MNPTVSDQAIRLDLVAKSRGIAAAEKY 108
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
FL LP+T K YGALLN Y + M AE L+ KM++ +A ++ YN +MTLY K+
Sbjct: 109 FLDLPETSKTHLTYGALLNCYCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVN 168
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++++V S++ +MK + D+Y+YN+W+ + ++ + +E V E MK D V P+WTT+
Sbjct: 169 QHEKVPSVIQDMKADDVLPDIYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTY 228
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
S +A++Y+ G EKAE +L+ +E T D Y +L++LY EV+RVW +
Sbjct: 229 SNLASIYVDAGLFEKAEAALKELEKWNTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKR 288
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS------------------------V 381
P N+ Y MI +LA + D+ G E F+EW + V
Sbjct: 289 NQPRRANMSYLNMIQALANLKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDV 348
Query: 382 KSS-------------YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
K++ YD R+AN M+ Y+ EG FDKA A GG+ N+ +WE
Sbjct: 349 KATKDKGTDGELKHPKYDIRVANAMIKAYITEGMFDKAVAVKKRAKMRGGRLNAKTWEIF 408
Query: 429 AEGHIRERRILEALSCLKGAF--AAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVAL 486
E +++E + C A + W P E+ D+ E FV +
Sbjct: 409 MEHYLKEGDLKMVHWCADRAIKKGHSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEV 468
Query: 487 LRQ 489
L++
Sbjct: 469 LKK 471
>gi|224084592|ref|XP_002307350.1| predicted protein [Populus trichocarpa]
gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 208/369 (56%), Gaps = 3/369 (0%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
VL DW G + +L + K+L K +RYK ALE+ WM N+ FR++ A+ ++L
Sbjct: 65 VLQDWINNGNKVKLSQLNLISKQLLKSKRYKQALEILQWMENQNN-FRITPGHHALMMEL 123
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
I KV+G+ A ++F +P + + LL+ YV+ R AE + K+ G V
Sbjct: 124 IVKVNGLNKAGEYFERIPGSGSKKAASLPLLHGYVKERDISKAESFMIKLSSSGLLVTPH 183
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
PYN MM LYM + +Y++V +++EMK + +V SYN+W+ + G K E V++ M
Sbjct: 184 PYNEMMKLYMALSQYEKVPLVIAEMKRNKLCRNVLSYNLWMGAFGEVFEVAKAEMVYKEM 243
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
D+ V W+T +++A +YIK G V+KA L+ E +++ R+ Y +L++LY S+
Sbjct: 244 VSDENVGVGWSTLASLANVYIKAGFVDKALLVLKDAEMKLSTNGRLGYFFLITLYSSLKN 303
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
KE V R+W ++V + Y +IS L ++GD+ E++F EW + YD R++N+
Sbjct: 304 KEGVLRLWEASKAVGGRIPCADYMCVISCLVKVGDLVAAEQVFAEWETNCFKYDIRVSNV 363
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAE 452
++ YV+ G KAE+F +E GG PN +WE L EG ++ +++ +A+ +K F+
Sbjct: 364 LLGAYVRNGLMGKAESFHLHTVERGGCPNYKTWEILMEGWVKSQKMDKAIDAMKKGFSVL 423
Query: 453 GAK--SWRP 459
+ WRP
Sbjct: 424 KVERCDWRP 432
>gi|116309055|emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 217/423 (51%), Gaps = 41/423 (9%)
Query: 106 KWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF 165
KWE+ V+ LRK Y+ AL++ + M RG + SD AI+LDL+AK G+A+AE +
Sbjct: 51 KWEVGVCVRRLRKQALYRPALKLSEVMARRG--MNPTVSDQAIRLDLVAKSRGIAAAEKY 108
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
FL LP+T K YGALLN Y + M AE L+ KM++ +A ++ YN +MTLY K+
Sbjct: 109 FLDLPETSKTHLTYGALLNCYCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVN 168
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++++V S++ +MK + D+Y+YN+W+ + ++ + +E V E MK D V P+WTT+
Sbjct: 169 QHEKVPSVIQDMKADDVLPDIYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTY 228
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
S +A++Y+ G EKAE +L+ +E T D Y +L++LY EV+RVW +
Sbjct: 229 SNLASIYVDAGLFEKAEAALKELEKWNTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKR 288
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS------------------------V 381
P N+ Y MI +LA + D+ G E F+EW + V
Sbjct: 289 NQPRRANMSYLNMIQALANLKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDV 348
Query: 382 KSS-------------YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
K++ YD R+AN M+ Y+ EG FD+A A GG+ N+ +WE
Sbjct: 349 KATKDKGTDGELKHPKYDIRVANAMIKEYITEGMFDQAVAVKKRAKMRGGRLNAKTWEIF 408
Query: 429 AEGHIRERRILEALSCLKGAF--AAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVAL 486
E +++E + C A + W P E+ D+ E FV +
Sbjct: 409 MEHYLKEGDLKMVHWCADRAIKKGHSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEV 468
Query: 487 LRQ 489
L++
Sbjct: 469 LKK 471
>gi|356514762|ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 492
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 242/455 (53%), Gaps = 10/455 (2%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++ ++S + +P + VL++W + G ++ L ++K LR R ALEV +WM+++
Sbjct: 34 LYSRISPLGDPSISVVPVLDEWIEEGNAVDGPHLHHIIKILRTRNRNTQALEVSEWMSSK 93
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
G +S+ D A+QLDLI +VHGV SAE + SL D K +V+GALLN YVR + +
Sbjct: 94 G--LPISSRDQAVQLDLIGRVHGVESAERYLQSLSDGDKTWKVHGALLNCYVREGLVDKS 151
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
L+ KM+D G+ V L YN +M+LY + ++Y++V ++ +MK+ G+ +++SY I ++S
Sbjct: 152 LSLMQKMKDMGF-VSFLNYNNIMSLYTQTQQYEKVPGVLEQMKKDGVPPNIFSYRICINS 210
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
+G +E + E M+ + + +W T+S + YIK EKA L + E +
Sbjct: 211 YCVRGDLANVEKLLEEMEREPHIGIDWITYSMVTNFYIKADMREKALVCLMKCEKKTHRG 270
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
+ V Y++L+S ++ K + R W L ++ N Y M+ L ++G+++ EK+
Sbjct: 271 NTVAYNHLISHNAALRSKGGMMRAWKLQKANCKKQLNREYITMLGCLVKLGELDKAEKVL 330
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
EW ++ D R+ N+++ Y + G +KAEA ++ EG P SW +A G++ +
Sbjct: 331 GEWELSGNTCDFRVPNILLIGYCQRGLVEKAEALLRKMVAEGKTPIPNSWSIVASGYVAK 390
Query: 436 RRILEALSCLKGAFAAEGA-KSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRK 494
+ +A C+K A A K WRPK + + F D+ E FV +
Sbjct: 391 ENMEKAFQCMKEAVAVHAQNKRWRPKVDVISSIFSWVTNNRDIEEAEDFVNSWKSVNAMN 450
Query: 495 EKDYMSLI------GLTDEAVAENNKKNDEDSDED 523
Y+SL+ G + + E+ K ++ + DE+
Sbjct: 451 RGMYLSLMKMCIRYGKHVDGILESMKADNIEIDEE 485
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 242/467 (51%), Gaps = 9/467 (1%)
Query: 71 IKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYD 130
+K ++ K+S + +P+ L +W + G+ ++ EL R+V +LR+ +R+ HALEV
Sbjct: 22 VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSK 81
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WMN G S ++ A+ LDLI +V+G +AE++F +L + K+ + YGALLN YVR +
Sbjct: 82 WMNETGVCV-FSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNEKTYGALLNCYVRQQ 140
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
+ L KM++ G+ SL YN +M LY I ++++V ++ EMKE+ + D YS+
Sbjct: 141 NVEKSLLHFQKMKEMGFVSSSLTYNNIMCLYTNIGQHEKVPGVLDEMKEENVAPDNYSFR 200
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
I +++ G+ E++ G+ M+ +W T++ A YI G ++A E L+ E
Sbjct: 201 ICINAFGAMSDLERIGGILRDMERRPDFTMDWNTYAVAAKFYIDGGDCDRAVELLKMSEY 260
Query: 311 RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
R+ +D Y++L++LY +G K EV R+W L + N Y ++ SL +I ++
Sbjct: 261 RLEKKDGEGYNHLITLYARLGNKIEVLRLWELEKEACKRRINQDYLTVLQSLMKIDGLKE 320
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
E + EW S + YD R+ N ++ Y + +KAEA + G SW +A
Sbjct: 321 AEVVLTEWESSGNCYDFRVPNTVIRGYTGKSMEEKAEAMLEDLARRGKTTTPESWGLVAT 380
Query: 431 GHIRERRILEALSCLKGAFAAE-GAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
+ + + A C+K A E + WRP V + E + E+FVA LR
Sbjct: 381 AYAEKGALGNAFKCMKTALGIEVENRKWRPGLKLVTSVLSWLGGEGSLKEVESFVASLRN 440
Query: 490 PGYRKEKDYMSLI-------GLTDEAVAENNKKNDEDSDEDSEMLLS 529
++ Y +L+ G + + + K + ++DE++ ++LS
Sbjct: 441 CIGVNKQMYHALVKADIREGGSNIDTLLKRMKDDQIETDEETTVILS 487
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 253/467 (54%), Gaps = 18/467 (3%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGG-RSLTKWELCRVVKELRKFRRYKHALEVYDWM 132
+++FR+++ D P++ A VL W ++K EL +VK LR+ RR+ ALE+ WM
Sbjct: 50 DSLFRRVAGAD-PRIPLAPVLEQWWLAEEHPVSKPELQSLVKYLRRRRRFSQALELSMWM 108
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
R LS D A +L+LI+KVHG+ A ++F ++P+ L++ + YG+LL Y A
Sbjct: 109 TER-RHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYTEAERV 167
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
AE L + MR G A +S YN MM LY +I + + V SM M+E GI D+++ +
Sbjct: 168 EKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVHSMYKSMEEGGIVPDIFTIDNL 226
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+S+ E +E V E + ++ W +F+ + +++K G E+A ++ + E RI
Sbjct: 227 VSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERALQAFQESEKRI 284
Query: 313 TGRD--RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-VTNLGYHAMISSLARIGDIE 369
T R RV Y +LL++Y + EV R+W++YRS P N Y IS L ++ DI
Sbjct: 285 TARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDIV 344
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
G EK +EEW S +D R+ N++++ Y KEG +KAEA + I++G P S +W LA
Sbjct: 345 GAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTPFSNTWYKLA 404
Query: 430 EGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNV---INFF---KACEEESDMGS-KEA 482
G+ + + +A K A A+ + W+P NV IN+F K E +M S +
Sbjct: 405 GGYFKVGQASKAADLTKKALAS-ASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQR 463
Query: 483 FVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKNDEDSDEDSEMLLS 529
V L R + K Y++ G + + KK+ ++DE+++ +L+
Sbjct: 464 LVPLTRDVYHGLLKTYVN-AGEPASDLLDRMKKDGIEADEETDKILA 509
>gi|22165052|gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/466 (31%), Positives = 250/466 (53%), Gaps = 15/466 (3%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGG-RSLTKWELCRVVKELRKFRRYKHALEVYDWM 132
+++FR+++ +P+L + VL W R + K E+ ++K L + RR+ AL++ WM
Sbjct: 81 DSLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWM 140
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
R LS D A +L+LI KVHG+ A ++F S+PD LK ++ YG+LL Y A+
Sbjct: 141 TERL-HLHLSPGDVAYRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEAKCV 199
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
AE L +KMR G A S YNVMM LY++ + + V SM M+E GI DV++ +
Sbjct: 200 EKAEELFEKMRGMGMA-SSYAYNVMMRLYLQDGQVERVHSMHRTMEESGIVADVFTTDTL 258
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVN-PNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+++ E +E V E K D + W +++T+ + ++ G E+A ++ + E +
Sbjct: 259 VAAYVVAEDIEAIEKVLE--KADTCNDLMTWHSYATIGKVLMQSGMEERALQAFQESEKK 316
Query: 312 ITGR-DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-VTNLGYHAMISSLARIGDIE 369
I + +RV Y +LL++Y +G EV R+W++Y+S P N Y IS L ++ DI
Sbjct: 317 IAKKSNRVAYGFLLTMYADLGMNSEVDRIWDVYKSKVPASACNSMYMCRISVLLKMNDIV 376
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
G EK +EEW S +D R+ NL+++ Y KEG +KAEA + +++G P +W LA
Sbjct: 377 GAEKAYEEWESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTPFGNTWYKLA 436
Query: 430 EGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
G+ + + +A K A A+ G+ W P NV+ E+ ++ + E +LL++
Sbjct: 437 GGYFKVGQASKAADLTKKALAS-GSNEWTPDLTNVLMSLNYFAEQKNVEAAEEMASLLQR 495
Query: 490 PGYRKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLLS 529
Y L+ G + + KK+ ++DE++E +L+
Sbjct: 496 LITPTRDIYHGLLKTYVNAGKPVSDLLDRMKKDGMEADEETEKILA 541
>gi|356518447|ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 496
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 224/400 (56%), Gaps = 3/400 (0%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
L +W G ++ ++L + + L K +RY HALEV++W+ N+ + F + +D A++L+LI
Sbjct: 50 LQNWVDQGNDVSPFQLRSIARTLVKSKRYHHALEVFEWIKNQ-KNFHMIPADHAMKLELI 108
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
+ HG+ AE++F++LPD+ + LL YVR R AE + K+ + G V P
Sbjct: 109 IENHGLMEAEEYFMNLPDSAAKKAACLILLRGYVRDRDTSKAETFMLKLYELGLVVSPHP 168
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS--TEKMEGVFEL 271
+N MM LY+ EY +V ++ +MK I +V SYN+W+++C + +E VF
Sbjct: 169 FNEMMKLYLVTCEYRKVPLVIQQMKRNKIPCNVLSYNLWMNACSEEEGYVVAAVETVFRQ 228
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M D+ V W + +T+A Y K GQ +KA L+ E +++ +R+ + +L++LY S+
Sbjct: 229 MLNDRNVEVGWGSLATLANAYKKAGQSKKAILVLKDAEKKLSTCNRLGHFFLITLYASLK 288
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
KE V R+W ++V ++ Y +++ L ++GDI ++IF EW S YD R++N
Sbjct: 289 DKEGVLRLWEASKAVRGRISCANYICILTCLVKLGDIVQAKRIFLEWESNCQKYDIRVSN 348
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
+++ YV+ G ++AE+ +++GG PN + E L EG++ +++ EA+ +K A A
Sbjct: 349 VLLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMKRALAM 408
Query: 452 EGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPG 491
WRP V+ + E++ ++ + ++ + G
Sbjct: 409 MKDCHWRPPHGIVLAIAEYLEKDGNLEYADKYITDIHNLG 448
>gi|357110627|ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 234/482 (48%), Gaps = 60/482 (12%)
Query: 64 DFERRPMIKW--NAIFRKL-SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFR 120
D RR K+ A++R+L PQ V + R+ KWE+ V+ LR+
Sbjct: 7 DLARRSSKKYVEEALYRRLFRRGSTPQAVREEVDGFLDSRKRAF-KWEVGVCVRRLRRQE 65
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYG 180
Y+ AL++ + M RG + D AI+LDL+AK G+A+AE +F+ LP+T K YG
Sbjct: 66 LYRPALKLTEVMARRG--MNPTVGDQAIRLDLVAKSRGIAAAEKYFMDLPETSKTHLTYG 123
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
ALLN Y + M AE L++KM++ +A ++ YN +MTLY K+ + ++V S++ +MK
Sbjct: 124 ALLNCYCKESMTEKAEALMEKMKELNFAFTAMSYNSLMTLYTKVNQPEKVPSIIQDMKAD 183
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
+ DVY+YN+W+ S ++ +E V E MK D V P+WTT+S +A++Y++ G EK
Sbjct: 184 DVLPDVYTYNVWMRSLAARQDISGVERVIEEMKRDGRVVPDWTTYSNLASIYVEAGLFEK 243
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
AE +L+ +E R T D Y +L++LYG EV+ VW + P N+ Y MI
Sbjct: 244 AEAALKELEKRNTSNDLEAYQFLITLYGRTQNLVEVHHVWRSLKRNNPRKANMSYLNMIQ 303
Query: 361 SLARIGDIEGMEKIFEEW----------------------LSVKSS-------------- 384
LA + D+ E F+EW L +SS
Sbjct: 304 VLANLKDLPAAEACFKEWEARYIRPPKTKAIDAVTTETSKLDQESSTTNASNNDSDAKGT 363
Query: 385 --------------YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
YD R+AN +M YV EG DKA A GG+ NS +WE E
Sbjct: 364 EDKGMEEIDMKHPKYDIRVANALMKAYVTEGMLDKAVALKKRAKMRGGRLNSKTWEIFME 423
Query: 431 GHIRERRILEALSCLKGAF--AAEGAKSWRPKPVNVI-NFFKACEEESDMGSKEAFVALL 487
+I+ + A C A + W P P +V E++ D+ E FV +L
Sbjct: 424 HYIKVGDLKNAHWCTDRAIKKGHSSGRIWVP-PRDVTETLMGYFEKKKDVDGAEKFVEVL 482
Query: 488 RQ 489
++
Sbjct: 483 KK 484
>gi|293336604|ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 215/435 (49%), Gaps = 53/435 (12%)
Query: 106 KWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF 165
KWE+ V+ +R+ Y+ +L++ + M RG + SD AI+LDLIAK G+A+AE +
Sbjct: 51 KWEVGVCVRRMRRNALYRPSLKLSEVMARRG--MNPTVSDQAIRLDLIAKSRGIAAAEKY 108
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
FL LP+T K YGALLN+Y + M AE L++KM++ +A ++ +N +MT+Y K+
Sbjct: 109 FLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVN 168
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ ++V S++ +MK + DV++YN+W+ + + +E V E MK D V P+WTT+
Sbjct: 169 QAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTY 228
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
S +A++Y++ G EKAE +L+ +E R T D Y +L++LYG EV+RVW +
Sbjct: 229 SNLASIYVEAGMFEKAEAALKELEKRNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKR 288
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW---------LSVKSS------------ 384
P + N+ Y MI LA + D+ E F+EW + K S
Sbjct: 289 DNPRMANMSYLNMIQVLANLKDLSAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPKS 348
Query: 385 ----------------------------YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
YD R+AN M+ Y+ EG DKA A
Sbjct: 349 PSNPPNNQSGTKETGDETAEDLQPKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMR 408
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLKGAF--AAEGAKSWRPKPVNVINFFKACEEE 474
GG+ N+ +WE E +++ + A C A + W P P EE
Sbjct: 409 GGRLNAKTWEIFMEHYLKTGDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEEN 468
Query: 475 SDMGSKEAFVALLRQ 489
D+ E +V L++
Sbjct: 469 KDVDGAERYVGALKK 483
>gi|413953408|gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 215/435 (49%), Gaps = 53/435 (12%)
Query: 106 KWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF 165
KWE+ V+ +R+ Y+ +L++ + M RG + SD AI+LDLIAK G+A+AE +
Sbjct: 111 KWEVGVCVRRMRRNALYRPSLKLSEVMARRG--MNPTVSDQAIRLDLIAKSRGIAAAEKY 168
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
FL LP+T K YGALLN+Y + M AE L++KM++ +A ++ +N +MT+Y K+
Sbjct: 169 FLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVN 228
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ ++V S++ +MK + DV++YN+W+ + + +E V E MK D V P+WTT+
Sbjct: 229 QAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTY 288
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
S +A++Y++ G EKAE +L+ +E R T D Y +L++LYG EV+RVW +
Sbjct: 289 SNLASIYVEAGMFEKAEAALKELEKRNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKR 348
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW---------LSVKSS------------ 384
P + N+ Y MI LA + D+ E F+EW + K S
Sbjct: 349 DNPRMANMSYLNMIQVLANLKDLSAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPKS 408
Query: 385 ----------------------------YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
YD R+AN M+ Y+ EG DKA A
Sbjct: 409 PSNPPNNQSGTKETGDETAEDLQPKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMR 468
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLKGAF--AAEGAKSWRPKPVNVINFFKACEEE 474
GG+ N+ +WE E +++ + A C A + W P P EE
Sbjct: 469 GGRLNAKTWEIFMEHYLKTGDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEEN 528
Query: 475 SDMGSKEAFVALLRQ 489
D+ E +V L++
Sbjct: 529 KDVDGAERYVGALKK 543
>gi|302143279|emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 215/397 (54%), Gaps = 56/397 (14%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
L W K GRS+ + +L R++++LR F+RY HALE+Y+W+ ++ F +S D AIQLDL
Sbjct: 54 ALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIRDKF-YFDISPGDVAIQLDL 112
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
I+KVHG+ AE +F P++L+ +VYGALLN Y + + AE ++ +MRD G+ V +L
Sbjct: 113 ISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGF-VKTL 171
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
YNVM+ LY ++ +++++++++ EM+E GI LD ++Y I L++ + E ME + +
Sbjct: 172 SYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKL 231
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
+ D AVN +W + A Y+K EKA E L+
Sbjct: 232 ETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLK-------------------------- 265
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+SL ++ D++G EK FEEWLS +D R+ NL
Sbjct: 266 ---------------------------NSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNL 298
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAE 452
++ Y K+G +KAE + IE+G +P + +W+ LA G+ ++ +A+ LK A A
Sbjct: 299 LIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLA- 357
Query: 453 GAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
++ W+P PV + + + + D+ E + LLR+
Sbjct: 358 TSQGWKPNPVTLSACLEYLKGKGDVEEAENLIRLLRE 394
>gi|115482784|ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432901|gb|AAP54477.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639594|dbj|BAF26899.1| Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 254/467 (54%), Gaps = 18/467 (3%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGG-RSLTKWELCRVVKELRKFRRYKHALEVYDWM 132
+++FR+++ D P++ A VL W R ++K EL +VK LR+ R+ ALE+ WM
Sbjct: 50 DSLFRRVAGAD-PRIPLAPVLEQWWLAEERPVSKPELQSLVKYLRRRCRFSQALELSMWM 108
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
R LS D A +L+LI+KVHG+ A ++F ++P+ L++ + YG+LL Y A
Sbjct: 109 TER-RHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAERV 167
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
AE L + MR G A +S YN MM LY +I + + V+SM M+E GI D+++ +
Sbjct: 168 EKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDNL 226
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+S+ E +E V E + ++ W +F+ + +++K G E+A ++ + E RI
Sbjct: 227 VSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERALQAFQESEKRI 284
Query: 313 TGRD--RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-VTNLGYHAMISSLARIGDIE 369
T R RV Y +LL++Y + EV R+W++YRS P N Y IS L ++ DI
Sbjct: 285 TARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDIV 344
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
G EK +EEW S +D R+ N++++ Y KEG +KAEA + I++G S +W LA
Sbjct: 345 GAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTLFSNTWYKLA 404
Query: 430 EGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNV---INFF---KACEEESDMGS-KEA 482
G+ + ++ +A K A A+ + W+P NV IN+F K E +M S +
Sbjct: 405 GGYFKVGQVSKAADLTKKALAS-ASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQR 463
Query: 483 FVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKNDEDSDEDSEMLLS 529
V L R + K Y++ G + + KK+ ++DE+++ +L+
Sbjct: 464 LVPLTRDVYHGLLKTYVN-AGEPASDLLDRMKKDGIEADEETDKILA 509
>gi|242091818|ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 209/435 (48%), Gaps = 53/435 (12%)
Query: 106 KWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF 165
KWE+ V+ +R+ Y+ AL++ + M RG + SD AI LDLIAK G+A+AE +
Sbjct: 51 KWEVGVCVRRMRRNALYRPALKLSEVMTRRG--MNPTVSDQAICLDLIAKSRGIAAAEKY 108
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
FL LP+T K YGALLN+Y + M AE L+ KM + +A ++P+N +MT+Y K+
Sbjct: 109 FLDLPETSKTHLTYGALLNSYCKELMTEKAESLMAKMSELNFAFTAMPFNSLMTMYTKVN 168
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ ++V ++ MK + V++YN+W+ + + +E V E MK D V P+WTT+
Sbjct: 169 QPEKVPGIIQYMKADDVLPHVFTYNVWMRALAALNDIPGVERVIEEMKRDGRVAPDWTTY 228
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
S +A++Y+ G EKAE +L+ +E R T D Y +L++LYG EV+RVW +
Sbjct: 229 SNLASIYVDAGLFEKAEAALKELEKRNTSNDVEAYQFLITLYGRTQNLVEVHRVWRSLKR 288
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW--------------------------- 378
P + N+ Y MI LA + D+ E F+EW
Sbjct: 289 NNPRMANMSYLNMIQVLANLKDLPAAEACFKEWEARHIHPPKTKAKDSGADNISTTDPES 348
Query: 379 ---------------------LSVK-SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
L +K YD R+AN M+ Y+ EG DKA A
Sbjct: 349 SSNLPNNQSGIKETGDEAAKDLQLKHPKYDIRVANAMIKAYIAEGMLDKAVAVKKRAKMH 408
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLKGAF--AAEGAKSWRPKPVNVINFFKACEEE 474
GG+ N+ +WE E H++ + A C A + W P P EE
Sbjct: 409 GGRLNAKTWEIFMEHHLKTGDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEEN 468
Query: 475 SDMGSKEAFVALLRQ 489
D+ E +V L++
Sbjct: 469 KDVDGAEQYVESLKK 483
>gi|357140786|ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 143/466 (30%), Positives = 254/466 (54%), Gaps = 13/466 (2%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKG-GRSLTKWELCRVVKELRKFRRYKHALEVYDWM 132
++++ +++ + P+L VL W R + K EL ++K+L + RR+ HALE+ WM
Sbjct: 35 DSLYHRVAAVAIPRLQLTPVLEQWAFAEDRPVEKHELQAIIKKLIRLRRFSHALEMSMWM 94
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
+R F L D A +L+LI+KVHG+ SA ++F L +K + YG+LL Y A+
Sbjct: 95 TDR-RYFPLKPGDVAYRLELISKVHGLKSAVEYFGGLSKEIKKSQCYGSLLKCYAEAKFV 153
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
AE +M++ G + S PYNVMM LY + + ++V +M M+E GI+ D+++ +I
Sbjct: 154 EEAEKFFGEMQEMGM-MSSYPYNVMMKLYWETGQVEKVRTMYRAMEESGIKPDLFTIDIL 212
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
L+ + G E +E V E K + + W +++ +A+ ++K G KA ++L+ E RI
Sbjct: 213 LTVYKASGDLEGIEEVLEKAKPRENL-VGWHSYAIVASAFMKAGLQGKALQALQESEKRI 271
Query: 313 TGRD-RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
++ RV Y +LLS+ G + EV R+W++Y+S P ++ Y IS+L ++ D +
Sbjct: 272 DPKNGRVAYGFLLSMCADSGMRSEVDRIWDVYKSKVPTCNSM-YMCRISALLKMNDTDEA 330
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
EK F EW S +D R+ NL+++ Y EG +KAEA + I +G P + +W LA G
Sbjct: 331 EKAFREWESRFVHHDFRLINLLLNGYCAEGLMEKAEALVDEAITKGRMPYANTWYKLAAG 390
Query: 432 HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPG 491
++ ++L+A+ + A A+ W P NV+ E+ ++ + E +LLR
Sbjct: 391 FFKDGQVLKAVDLTRKALAS-ATSGWEPDLTNVLMSLDHFMEQKNVEAAEEMASLLRSLV 449
Query: 492 YRKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLLSQL 531
Y SL+ G+ + + ++ ++D++++ +L++L
Sbjct: 450 PLTRDVYHSLLKTYVHAGMPVSDLLDRMNEDGFEADQETDRILARL 495
>gi|326531954|dbj|BAK01353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 240/446 (53%), Gaps = 17/446 (3%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
++ W + +++ +L R V +LR+ RRY HALE+ WM++ E +L D A +LDLI
Sbjct: 67 IDRWAQERGRVSRPDLQRAVSQLRRARRYGHALEILSWMDSHKE-IKLLPLDHAARLDLI 125
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
AKVHG + AE+++ LP++ LL+ YV R AE + ++ G V
Sbjct: 126 AKVHGTSQAEEYYNKLPNSASREAASFPLLHCYVAERNVQKAESFMASLQSIGLPVDPHS 185
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+N MM LY+ EY++V S++ MK I + SYN+W+++C S ++ VF+ M
Sbjct: 186 FNEMMKLYVATCEYEKVFSVIDLMKRNNIPRNALSYNLWMNAC-SVSDVTSVQSVFKEMV 244
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D + W+T+ T+A +++K G KA LR E++++ R+ Y ++++ Y ++G
Sbjct: 245 NDGTIEVGWSTYCTLANIFMKHGLNSKAFACLRTAETKLSTAQRLGYSFVMTCYAALGDS 304
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+ V R+W + V + + Y + I L ++GDI+ E IF W +D R++N++
Sbjct: 305 DGVMRLWEASKCVPGRIPSANYMSAILCLIKVGDIDRAEWIFGSWEVECRKHDVRVSNVL 364
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG 453
+ YV+ G +KAE ++E+GG+PN +WE L EG ++ R++ +A++ +K A +
Sbjct: 365 LGAYVRNGWIEKAEKLHLHMLEKGGRPNYKTWEILMEGFVQSRQMDKAVNAMKKALSLMK 424
Query: 454 AKSWRPKPVNVI----NFFKACEEESDMGSKEAFVALLRQ------PGYRKE-KDYMSLI 502
WRP P+ ++ FF EE+ + ++ +L++ P Y+ + Y+
Sbjct: 425 GCHWRP-PLRLVEAIATFF---EEQGNTDDANRYIKVLQKFNLTSLPLYKSVLRAYIKAD 480
Query: 503 GLTDEAVAENNKKNDEDSDEDSEMLL 528
+ ++E ++D DE+ + L+
Sbjct: 481 TMLPTNISEMIARDDIVMDEEMDHLI 506
>gi|356510143|ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 530
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 222/400 (55%), Gaps = 3/400 (0%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
L +W G ++ EL R+ + L K + Y HALEV W+ N+ + F + +D A++L+LI
Sbjct: 75 LKNWVDEGNDVSHSELRRIARTLVKSKCYHHALEVVKWIENQ-KNFHMIPADYAMKLELI 133
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
+ + + AE++F++LPD+ + LL Y+R R AE + K+ + G + P
Sbjct: 134 IENYDLMEAEEYFMNLPDSAAKKAACLTLLRGYIRVRDTNKAETFMVKLYELGLVLSPHP 193
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS--TEKMEGVFEL 271
+N MM LY+ EY +V ++ +MK + +V SYN+W+++C + +E VF
Sbjct: 194 FNEMMKLYLATCEYRKVPLVMQQMKRNKVPCNVLSYNLWMNACTEEEGYGVAAVETVFRQ 253
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M+ D+ V W++ +T+A Y K GQ +KA L+ E +++ +R+ Y +L++LY S+
Sbjct: 254 MQNDRNVEVGWSSLATLANAYKKAGQSKKAILVLKDAERKLSTCNRLGYFFLITLYASLK 313
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
+KE V R+W ++V ++ Y ++ L ++GDI ++IF EW S YD R++N
Sbjct: 314 EKEGVLRLWEASKAVGGRISCANYICILICLVKLGDIVQAKRIFLEWESNCQKYDIRVSN 373
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
+++ Y + G+ ++AE+ +++GG PN + E L EG++ +++ EA+ +K A A
Sbjct: 374 VLLGAYARNGSMEEAESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMKRALAM 433
Query: 452 EGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPG 491
WRP V+ + E++ ++ ++ LR G
Sbjct: 434 MKDCHWRPPHGLVLAIAEYLEKDGNLKYANKYITDLRNFG 473
>gi|222637397|gb|EEE67529.1| hypothetical protein OsJ_24995 [Oryza sativa Japonica Group]
Length = 491
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 204/362 (56%), Gaps = 2/362 (0%)
Query: 128 VYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYV 187
V +WMN +G + D A+ LDLI ++HG ++AE +F +LPD K + YGALLN Y
Sbjct: 103 VSEWMNAKG-HVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYT 161
Query: 188 RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY 247
R + + KM++ G+ +LPYN +M LY + ++++V S+++EMK GI D +
Sbjct: 162 RELLVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNF 221
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
SY I ++S G++ ME E M+ + + +W T++ +A+ YIK EKA +L++
Sbjct: 222 SYRICINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKK 281
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD 367
E++I +D Y++L+SLYG +G K EV R+W L S N Y M++ L ++ +
Sbjct: 282 AEAKINIKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLNE 341
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
IE E + +EW S +++D ++ N++++ Y ++ DKAEA + +++G P STSW
Sbjct: 342 IEEAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAI 401
Query: 428 LAEGHIRERRILEALSCLKGAFAAEGAKS-WRPKPVNVINFFKACEEESDMGSKEAFVAL 486
+A G+ + +A K A + W P+P + K +E D+ E FV L
Sbjct: 402 VAAGYAEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDL 461
Query: 487 LR 488
L+
Sbjct: 462 LK 463
>gi|42570837|ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis thaliana]
gi|330251966|gb|AEC07060.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 395
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 204/353 (57%), Gaps = 3/353 (0%)
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
+S D AI+LDLIAKV G+ AE FF ++P ++ +YGALLN Y ++ AE +
Sbjct: 9 ISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQ 68
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M++ G+ LPYNVM+ LY++ +Y VE ++ EM+++ ++ D+++ N L +
Sbjct: 69 EMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVS 128
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV-P 319
E ME + D+ ++ +W T++ A YIK G EKA E LR+ E + + R
Sbjct: 129 DVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHA 188
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
Y L+S YG+ GKKEEVYR+W+LY+ G N GY ++IS+L ++ DIE +EKI EEW
Sbjct: 189 YEVLMSFYGAAGKKEEVYRLWSLYKE-LDGFYNTGYISVISALLKMDDIEEVEKIMEEWE 247
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+ S +D RI +L+++ Y K+G +KAE N ++++ ++++WE LA G+ ++
Sbjct: 248 AGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKME 307
Query: 440 EALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+A+ K A WRP V +++ E + DM + LL + G+
Sbjct: 308 KAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGH 359
>gi|356542147|ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Glycine max]
Length = 483
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 223/405 (55%), Gaps = 10/405 (2%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
N +F+ + +P + + +L W + GR +TK +L +V L + RR+ HAL+V +WM+
Sbjct: 26 NRVFK----VGDPVIPVSPILKQWVEEGREVTKLQLENLVYRLTQSRRFTHALQVLEWMS 81
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
N + LS + A Q++LI+KV G+ AE +F +PD + ++Y ALL Y +
Sbjct: 82 NE-RNYELSPGNIAKQINLISKVRGLEQAEKYFRGIPDAKIEFKIYAALLRCYAEHKSVE 140
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE ++ K+++ + N+M+ LY K +Y++++ ++ EMKEK I + +Y I L
Sbjct: 141 EAEAVLKKIKELHPVNITACCNMMLELYAKKGKYEKLDRLMQEMKEKDI-CNAGTYTIRL 199
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
++ + ME + M+VD +W T+ T A Y K+ EK L++ E
Sbjct: 200 NAYVIATDIKGMEKLLMQMEVDPMATVDWYTYMTAANGYRKVHNFEKVAAMLKKSEHVAR 259
Query: 314 GRD-RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
G+ R+ Y + ++Y +G K+EV+R+WN+ S P N Y M+SSL ++ DI+G E
Sbjct: 260 GKTKRLAYESIQTMYAIIGNKDEVHRLWNMCTS--PKKPNKSYIRMLSSLVKLDDIDGAE 317
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
KI EEW SV ++D RI NLM+S Y K G FDKAEA+ +++ G + +W+ LA G+
Sbjct: 318 KILEEWESVHENFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKHLDGRTWDRLACGY 377
Query: 433 IRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
+ A+ +K A + A RP P ++ K +E+ D+
Sbjct: 378 NAGNDMENAVQAMKKAVSTNLAGR-RPDPFTLVACVKYLKEKGDL 421
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 228/416 (54%), Gaps = 2/416 (0%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
+++ +S + N A L+DW G ++ EL R+V++LRK R+ AL+V +WMN
Sbjct: 29 SLYSVISPLGNQTTSVAPQLDDWVYKGNKVSVGELQRIVRDLRKRSRFTQALQVSEWMNK 88
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN 194
G S + A+ LDL +VHG +AE +F SL D ++ + +GALLN YVR R
Sbjct: 89 IGVCI-FSPVEHAVHLDLTGRVHGFYAAETYFNSLKDIERNEKTHGALLNCYVRQRQVDK 147
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
+ + KM++ G+A+ SL YN +M LY I ++++V + +EMKE + D +SY I +
Sbjct: 148 SLSHLKKMKELGFALSSLTYNNIMCLYTNIGQHEKVSDVFNEMKENHVLPDNFSYRICIG 207
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
S G + + M + + M+ + +W T+S +A YIK +A ++LR+ E R+
Sbjct: 208 SYGVRSDIDGMNAILKEMESQPHIVMDWNTYSVVANFYIKAELSSEAIDALRKCEKRLDD 267
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
+D Y++L+SLY +GKK EV R+W++ +S N + M+ SL ++ + + +KI
Sbjct: 268 KDGEGYNHLISLYARLGKKNEVLRLWDMEKSACKRCLNRDFITMLESLVKLEEFDEADKI 327
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+EW + YD + N+++ Y ++ +KAEA I ++ +++SW +A+ ++
Sbjct: 328 LKEWEFSGNCYDYGVPNVVVVGYSEKDFPEKAEAILQDIWKKRKYTDTSSWILVADRYLL 387
Query: 435 ERRILEALSCLKGAFAA-EGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
+ + +AL CLK A K +P + + + + + + EA V LL++
Sbjct: 388 KGEMEKALECLKTAVCLYPENKKRKPNHRVISSIYSWIGDNASVEDAEALVRLLKK 443
>gi|449515498|ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 200/346 (57%), Gaps = 4/346 (1%)
Query: 103 SLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASA 162
S+TK L RVVK+ K +RY+ ALE M R + FR+ ++ A++L+L K HG+ A
Sbjct: 91 SITK--LRRVVKKFCKSKRYERALEALILMETR-DNFRMYPAEHALRLELTIKAHGLLKA 147
Query: 163 EDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
E++F LP + LL+ YV+ R AE + K+RD G V+ YN MM LY+
Sbjct: 148 EEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYV 207
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
+ ++V ++ +MK+ I +V SYN+W+++C +E VFE M DK V W
Sbjct: 208 ATYQNEKVPLVIKDMKQNLIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGW 267
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
+T T+A +YI+ G VEKA +L+ E +++ R+ Y +L++LY S+ KE V+RVW
Sbjct: 268 STMCTLANVYIQEGLVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRA 327
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
++V T Y ++ L ++G+I+ EK+F+EW +YD R++N+++ YV+ G
Sbjct: 328 SKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGL 387
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR-ERRILEALSCLKG 447
+KAE+ + GG PN +WE L EG +R ++ + A++ L G
Sbjct: 388 LEKAESLHRHTLGRGGNPNYKTWEILMEGWVRSQQNVDRAINFLTG 433
>gi|449470082|ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 200/346 (57%), Gaps = 4/346 (1%)
Query: 103 SLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASA 162
S+TK L RVVK+ K +R++ ALE M R + FR+ ++ A++L+L K HG+ A
Sbjct: 91 SITK--LRRVVKKFCKSKRFERALEALILMETR-DNFRMYPAEHALRLELTIKAHGLLKA 147
Query: 163 EDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
E++F LP + LL+ YV+ R AE + K+RD G V+ YN MM LY+
Sbjct: 148 EEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYV 207
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
+ ++V ++ +MK+ I +V SYN+W+++C +E VFE M DK V W
Sbjct: 208 ATYQNEKVPLVIKDMKQNQIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGW 267
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
+T T+A +YI+ G VEKA +L+ E +++ R+ Y +L++LY S+ KE V+RVW
Sbjct: 268 STMCTLANVYIQEGLVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRA 327
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
++V T Y ++ L ++G+I+ EK+F+EW +YD R++N+++ YV+ G
Sbjct: 328 SKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGL 387
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR-ERRILEALSCLKG 447
+KAE+ + GG PN +WE L EG +R ++ + A++ L G
Sbjct: 388 LEKAESLHRHTLGRGGNPNYKTWEILMEGWVRSQQNVDRAINFLTG 433
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 218/398 (54%), Gaps = 9/398 (2%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
I RK + P+ S+L + G ++ EL + K L + RY AL++ +WM N+
Sbjct: 41 ILRK----NGPRRSVTSLLQERIDSGHAVALSELRFISKRLIRSNRYDLALQMIEWMENQ 96
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV----YGALLNAYVRARM 191
E + S D +++L+LI K HG+ AE++F L ++ RV Y LL +YV+ +M
Sbjct: 97 KE-IQFSVYDISLRLELIIKTHGLKQAEEYFEKLLNSSASLRVAKSAYLPLLRSYVKKKM 155
Query: 192 RGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
E+ ++K+ G+ V P+N MM LY +Y++V +VS MK I +V SYN+
Sbjct: 156 VKEGEVFMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKVNKIPRNVLSYNL 215
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
W+++C +E V+ M DK+V W++ T+A +YIK G EKA+ L E
Sbjct: 216 WMNACCQVSGVTAVETVYREMVGDKSVEVGWSSLCTLANVYIKGGFDEKAKLVLENAEKL 275
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
+ +R+ Y +L++LY S+G KE V R+W + V ++ Y ++SSL +IGD+E
Sbjct: 276 LNRSNRLGYFFLITLYASLGDKEGVVRLWEASKLVCGRISCANYICVLSSLVKIGDLEEA 335
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
E++F EW + +YD R++N+++ Y++ G KAE+ ++E GG PN +WE L EG
Sbjct: 336 ERVFNEWEAQCFNYDVRVSNVLLGAYMRNGEIRKAESLHARVLERGGNPNYKTWEILMEG 395
Query: 432 HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFK 469
++ + + +A+ + AF WRP V+ K
Sbjct: 396 WVKCQSMEKAIVAMHRAFELMKGCHWRPSESIVMAIAK 433
>gi|115436132|ref|NP_001042824.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532355|dbj|BAF04738.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|125525550|gb|EAY73664.1| hypothetical protein OsI_01547 [Oryza sativa Indica Group]
gi|125570062|gb|EAZ11577.1| hypothetical protein OsJ_01442 [Oryza sativa Japonica Group]
gi|215713519|dbj|BAG94656.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 504
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/440 (31%), Positives = 231/440 (52%), Gaps = 12/440 (2%)
Query: 66 ERRPM--IKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYK 123
ERRP+ +W A++ +LS P G L W + R L++ ++ V+ RKF++ K
Sbjct: 32 ERRPLDGARW-ALYARLS-AHLPSGGMVEELGRWLRERRPLSEEQVLFCVRRFRKFKQNK 89
Query: 124 HALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALL 183
HAL++ DWM RG L A++LDL++K++G+ +AE++F SLPD + ++ Y LL
Sbjct: 90 HALQLMDWMEARG--VNLELKHHALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLL 147
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR 243
N Y RM L + M+ L YN +M LY+K + +++ + V +M+E GI+
Sbjct: 148 NCYAEHRMAEKGLELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQ 207
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
+ +SY + S E E V EL +V+ W+ ++T+A Y K+ Q +KAE
Sbjct: 208 PNKFSYFVLTESYIMMNDIESAEKVLKELQEVNSV---PWSLYATLANGYNKLQQFDKAE 264
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
+L++ E + D +H LLS Y + G EV R+W +S F TN Y M+ +L
Sbjct: 265 FTLKKAEEVLDKHDVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKAL 324
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
++ D + +++IF+EW S YD +I N+++ Y+ +G DKAEA + + + N
Sbjct: 325 KKLDDFDTLQQIFQEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQTTMAQ-DHSNY 383
Query: 423 TSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEA 482
++ AE ++ + ++ EAL K A + W P+ + V + K E+ D+ E
Sbjct: 384 RTFCIFAEFYLEKSKMNEALQVWKDAKKMVKGQDWVPEKL-VNRYLKHFEDSKDVDGMET 442
Query: 483 FVALLRQPGYRKEKDYMSLI 502
F L+ G + Y +LI
Sbjct: 443 FCECLKNLGRLDAEAYEALI 462
>gi|255553777|ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542911|gb|EEF44447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 222/407 (54%), Gaps = 5/407 (1%)
Query: 83 MDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLS 142
+ +P+ VL+ W G ++ K L +V ++ F R+ HAL++ WM +R LS
Sbjct: 17 LKDPKASVIPVLDQWVNEGNTVRKALLRSLVNLMKGFNRFNHALQISQWMADR-PNLTLS 75
Query: 143 ASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKM 202
SD ++L+L+ +++G A AE +F LPD K R VY ALL+ YV+ AE ++++M
Sbjct: 76 PSDVVVRLELVHRIYGSAHAEKYFEKLPDKFKCREVYCALLSGYVQESSVRKAEAIMEEM 135
Query: 203 RDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST 262
R KG A PYN+++ LY K +Y+++ ++ EM+ G+ Y+ + +++ + +
Sbjct: 136 RAKGMANSCFPYNLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTMSNLMAAYVAASNI 195
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV-PYH 321
ME + ++ D + +W +S A+ Y+K G +EKA LR++E + + +
Sbjct: 196 SGMERILNQIEKDPQLGNDWRVYSVAASGYLKFGLIEKALTMLRKLEDVMPLEKKTSAFD 255
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
L++LYG GK++E+Y VWN Y+ + + MISSL+++ DI+G EKIF EW S
Sbjct: 256 ILVTLYGKTGKRDELYLVWNTYKPLIE-LKETSVMTMISSLSKLDDIKGAEKIFREWESQ 314
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
YD R+ N ++ Y ++G KAEA ++ P ++SW LA G+I ++ +A
Sbjct: 315 CMMYDFRVLNTLLFAYCRKGLLKKAEAAVEKAAKD-RTPCASSWGILAMGYIEHNQMYKA 373
Query: 442 LSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
+ LK A + G + WRP + + E++ D+ E LL+
Sbjct: 374 VEMLKKALSISG-QGWRPNSMTLTACLNFLEKQGDVEGVEEVTKLLK 419
>gi|357142115|ref|XP_003572464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 546
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 237/464 (51%), Gaps = 13/464 (2%)
Query: 73 WNAIFRKLSLM--DNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYD 130
W ++ +LS + D P A+ L+ W + R L++ +L V++LR +R YK ALE+ D
Sbjct: 82 WARLYTRLSTLPPDAPLGCLAAELDQWLRERRPLSEQQLFSYVRKLRSYRHYKRALELMD 141
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WM RG +L A++L L+ KV+G+ +AE++F SLP+ K + Y +LLN Y R
Sbjct: 142 WMEARGASLQLG--HHAVRLGLVCKVNGLEAAEEYFWSLPEMFKSIKTYSSLLNCYAEHR 199
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
L +KM+ +L YN +M LY+K + +++ + +M+E +R D ++Y
Sbjct: 200 KADKGLELFEKMKAMNITPSTLVYNNLMDLYLKTDQPEKIPTTFEQMRENHVRTDSFTYY 259
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
+ S + E E +++K+ W+ ++ +A Y K+ Q +KA +L++ E
Sbjct: 260 MLTQSYIMVNDLKSAEKFVE--ELEKSTPVPWSLYTVLANNYNKLAQFDKAVLALKKAEE 317
Query: 311 RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
+ + +H LLSLY S G EV RVW +S F N Y M+S+L ++ D +
Sbjct: 318 VMDRSEISAWHNLLSLYASSGNSSEVKRVWESLKSAFTKCINRSYLVMLSALKKLDDFDS 377
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
++++F+EW S YD RI N+M+ Y+ + D+AEA + + +G N T++
Sbjct: 378 LQQLFQEWESTHERYDMRITNVMIEAYLAKDMTDEAEALRQTAMAKGHS-NVTTFYIFVV 436
Query: 431 GHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQP 490
++ + R EAL + A +W P V F K EE D+ EAF L++
Sbjct: 437 SYLEKSRTSEALDIWRDAEKMVKTPNWVPPKELVTRFLKHFEEAKDVDGMEAFWEHLKKL 496
Query: 491 GYRKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLL 528
G + Y +LI G T+ +++ +++ + D E LL
Sbjct: 497 GCLDAEAYGALIRTYAAAGRTNTSISRRIEEDRVEIGPDMEELL 540
>gi|125559056|gb|EAZ04592.1| hypothetical protein OsI_26742 [Oryza sativa Indica Group]
Length = 402
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 201/358 (56%), Gaps = 2/358 (0%)
Query: 132 MNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARM 191
MN +G + D A+ LDLI ++HG ++AE +F +LPD K + YGALLN Y R +
Sbjct: 1 MNAKG-HVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELL 59
Query: 192 RGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
+ KM++ G+ +LPYN +M LY + ++++V S+++EMK GI D +SY I
Sbjct: 60 VEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRI 119
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
++S G++ ME E M+ + + +W T++ +A+ YIK EKA +L++ E++
Sbjct: 120 CINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEAK 179
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
I +D Y++L+SLYG +G K EV R+W L S N Y M++ L ++ +IE
Sbjct: 180 INIKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLNEIEEA 239
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
E + +EW S +++D ++ N++++ Y ++ DKAEA + +++G P STSW +A G
Sbjct: 240 EVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAG 299
Query: 432 HIRERRILEALSCLKGAFAAEGAKS-WRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
+ + +A K A + W P+P + K +E D+ E FV LL+
Sbjct: 300 YAEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDLLK 357
>gi|242039187|ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/472 (30%), Positives = 254/472 (53%), Gaps = 25/472 (5%)
Query: 67 RRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHAL 126
R+P+ + ++R++ + P + + VL W++ G ++ K+ + +VK+L RR+ HAL
Sbjct: 38 RQPLP--DNLYRRIMNVGRPSIPLSPVLKQWDQEGHTVKKFVIQAIVKKLVGLRRFAHAL 95
Query: 127 EVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAY 186
E+ WM +R L+A D A +LDLI+KVHG+ A ++F +P L+ + YG+LL Y
Sbjct: 96 ELSFWMTDR-RHLHLTAGDVAYRLDLISKVHGLEKAVEYFGMVPKRLRMPQCYGSLLKCY 154
Query: 187 VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV 246
V A+ AE KM++ G S Y MM LY++ + + V +M +M+EKG++ D
Sbjct: 155 VEAKAVDKAEEHFAKMQEMGMK-SSYTYTSMMKLYLETGQLERVHAMFQDMEEKGVKPDT 213
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN-----WTTFSTMATMYIKMGQVEKA 301
+S S + + E +EGV +++ DKA NP+ W + A++++K G +A
Sbjct: 214 FSVE---SMLAAYIAAEDVEGVGKVL--DKA-NPHEKLVKWHGQALAASLFMKSGMQVRA 267
Query: 302 EESLRRVESRITGR-DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
+L E RI+ + R+ Y +LL Y +G EV R+W++Y+S P +N Y + IS
Sbjct: 268 VMALLEAERRISPKSSRIAYAFLLKTYTDLGMYPEVGRIWSVYKSKVPP-SNTMYLSRIS 326
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSY-DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+L ++ DI+G E +EW +V Y D R+ NLM+ Y +EG +KA A + I++G
Sbjct: 327 ALLKMNDIDGAEATLKEWETVSLRYHDFRLINLMVDAYCREGLVEKAVALVDDAIKKGRT 386
Query: 420 PNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGS 479
P + +W LA G + + +A+ + A + W+P NV+ + + D+ +
Sbjct: 387 PYANTWYKLAGGFFKTGEVSKAVDMTRKALES-ATPPWKPDLTNVLMSLEHFMNQKDVEA 445
Query: 480 KEAFVALLRQPGYRKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSE 525
E ++L++ G ++ Y L+ G + E KK+ ++DE++E
Sbjct: 446 AEEIASMLQKLGPLTKEVYHCLLKTYVRAGKPVSDLLERMKKDGLEADEETE 497
>gi|413953409|gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 196/399 (49%), Gaps = 51/399 (12%)
Query: 142 SASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK 201
+ SD AI+LDLIAK G+A+AE +FL LP+T K YGALLN+Y + M AE L++K
Sbjct: 175 TVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEK 234
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
M++ +A ++ +N +MT+Y K+ + ++V S++ +MK + DV++YN+W+ + +
Sbjct: 235 MKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKD 294
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
+E V E MK D V P+WTT+S +A++Y++ G EKAE +L+ +E R T D Y
Sbjct: 295 IPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEKRNTSNDIEAYQ 354
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW--- 378
+L++LYG EV+RVW + P + N+ Y MI LA + D+ E F+EW
Sbjct: 355 FLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWEAR 414
Query: 379 ------LSVKSS----------------------------------------YDPRIANL 392
+ K S YD R+AN
Sbjct: 415 HIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPKHPKYDIRVANA 474
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAF--A 450
M+ Y+ EG DKA A GG+ N+ +WE E +++ + A C A
Sbjct: 475 MIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLKMAHWCADRAMKKG 534
Query: 451 AEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
+ W P P EE D+ E +V L++
Sbjct: 535 HSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKK 573
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 247/469 (52%), Gaps = 23/469 (4%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ ++R++ + P + + VL W + G + K+ + +VK+L RR+ HALE+ WM
Sbjct: 40 DELYRRIMNVGRPSIPLSPVLEQWNQEGHTAKKFVIQAIVKKLVGLRRFAHALELSFWMT 99
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+R LS D A +LDLI+KVHG+ A ++F +P L+ + YG+LL YV A+
Sbjct: 100 DR-RHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAVD 158
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE KM++ G S Y MM LY++ + + V +M +M+EKG++ D +S L
Sbjct: 159 KAEEHFAKMQEMGM-TSSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAML 217
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPN-----WTTFSTMATMYIKMGQVEKAEESLRRV 308
+ + + E ++GV +++ DKA NP+ W ++ A++++K G A +L
Sbjct: 218 A---AYIAAEDVQGVGKVL--DKA-NPHEKLVTWHGHASAASLFMKSGMQVGAVMALVEA 271
Query: 309 ESRITGR-DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD 367
E RI+ + R+ Y +LL Y +G E R+W++Y+S P N Y + +S+L R D
Sbjct: 272 ERRISPKSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVPP-CNTMYMSRLSALLRTND 330
Query: 368 IEGMEKIFEEWLSVKSSY-DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWE 426
I+G E +EW +V Y D R+ N+M+ Y +EG +KA A + I++G P + +W
Sbjct: 331 IDGAEATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTWY 390
Query: 427 TLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVAL 486
LA G + ++ EA+ + A + WRP NV+ ++ D+G+ E V+
Sbjct: 391 KLAGGFFKTGQVPEAVDMTRKALDS-ATPPWRPDLANVLMSLNHFVDQKDVGAAEEMVST 449
Query: 487 LRQPGYRKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLLS 529
L++ Y L+ G + E K++ ++DE++E +L+
Sbjct: 450 LQKLVPLTRDVYHCLLKTYVRAGKPPSDLLERMKEDGLEADEETERILA 498
>gi|326533934|dbj|BAJ93740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 135/419 (32%), Positives = 222/419 (52%), Gaps = 8/419 (1%)
Query: 73 WNAIFRKLS-LMDNPQLGS-ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYD 130
W ++++LS L LG A+ L+ W + L +L V++LR FR+++ ALE+ D
Sbjct: 35 WVPLYKRLSKLPPAAPLGCVAAELDRWLCERKPLCGHQLLFYVRKLRNFRQHRRALELMD 94
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WM RG L D A++LDLI V+G+ +AE++FLSLPD K + Y +LL+ Y +
Sbjct: 95 WMEARGAN--LLPGDHALRLDLICTVNGLEAAEEYFLSLPDMYKSVKTYSSLLHCYAEHK 152
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
EL +KMR ++L Y +M+LY+K + +++ EM+ G+R D ++Y
Sbjct: 153 AEKALEL-YEKMRTMNIVPNTLVYKNLMSLYLKTGQPEKILQTFEEMRANGVRTDNFTYY 211
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
+ S E E E ++K++ +W+ ++ +A Y K+GQ +KA +L++ E
Sbjct: 212 MLTESHIMLNGLESTEKFLE--DLEKSIPVHWSLYTRLADSYNKVGQFDKAGLTLKKAEE 269
Query: 311 RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
+ + +H LLSLY S G EV RVW+ RS +N Y M+S+L ++ D +
Sbjct: 270 VMDRGEMFAWHNLLSLYASSGNLSEVKRVWSSLRSELKISSNRSYLVMLSALKKLDDFDC 329
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
M+++F+EW + SYD RI N+M+ Y+ + D+AEA + + +G N ++ E
Sbjct: 330 MQQVFQEWELTQESYDMRIPNVMIKAYLAKDMTDEAEALRQTAMAQGHS-NPLTFYIFTE 388
Query: 431 GHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
++ + R AL + A +W P P V F K EE D+ E+F A L +
Sbjct: 389 SYLEKSRTEAALEVWRDAGKMVKTPNWAPPPELVKRFLKHFEEAKDVDGMESFCACLEK 447
>gi|356547012|ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20710, mitochondrial-like [Glycine max]
Length = 482
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/430 (31%), Positives = 232/430 (53%), Gaps = 13/430 (3%)
Query: 52 CSMSQIHSYGTVDFERRPMIKW--NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWEL 109
C +S S G + ++ N +F+ +P + +LN W + GR +TK +L
Sbjct: 2 CGVSVCGSLGMCMYSTESVVASLENGVFKN----GDPLSSVSPILNQWVEEGREVTKLQL 57
Query: 110 CRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL 169
+ L + RR+ HAL+V +WM+N + LS A Q++LI+KVHG+ AE +F +
Sbjct: 58 EDLAYRLTQSRRFTHALQVLEWMSNE-RNYELSPGSIAKQINLISKVHGLEQAERYFRGI 116
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPY-NVMMTLYMKIKEYD 228
PD + ++Y ALL Y + AE ++ +++ + V+ P N+M+ LY K +Y+
Sbjct: 117 PDDKIEFKIYAALLRCYAEHKSVEEAEAVMKXIKEL-HPVNITPCCNMMLELYAKKGKYE 175
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+++ ++ EMKEK I + +Y I L++ + ME + M+ D +W T+ T
Sbjct: 176 KLDRLMQEMKEKDI-CNASTYTIRLNAYVVVTDIKGMEKLLMQMEADPVATVDWYTYMTA 234
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDR-VPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
A Y ++ EK E L++ E G R + + + ++Y +G K+EVYR+WN+ S
Sbjct: 235 ANGYRRVHNFEKVAEMLKKSEHLARGNTRRLAFESIQTMYAIIGNKDEVYRLWNMCTS-L 293
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
N Y M+SSLA++ +I+G EKI EEW S +++D RI NLM+S Y K G FDKAE
Sbjct: 294 KKPNNSSYIRMLSSLAKLDEIDGAEKILEEWESKYANFDVRIPNLMISAYCKWGQFDKAE 353
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINF 467
A+ +++ G + + +W+ LA G+ + +A+ +K A ++ RP P ++
Sbjct: 354 AYIRRLLDGGKQLDGRTWDRLACGYKAGNDMEKAVQAMKKA-VSKNLGGRRPDPFTLVAC 412
Query: 468 FKACEEESDM 477
K +E+ D+
Sbjct: 413 VKYLKEKGDL 422
>gi|226502666|ref|NP_001140872.1| uncharacterized protein LOC100272948 [Zea mays]
gi|194701536|gb|ACF84852.1| unknown [Zea mays]
gi|413924212|gb|AFW64144.1| hypothetical protein ZEAMMB73_253479 [Zea mays]
Length = 525
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 236/450 (52%), Gaps = 9/450 (2%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P +A+ + W + +++ EL R + LR+ RRY+ ALE++ WM + RLS+ D
Sbjct: 66 PAGTAAAAVERWAQDRVHVSQPELRRAIGMLRRERRYEQALEIFSWMES-CSSLRLSSWD 124
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A +LDLIAK + + AE+++ L + LL+ YV R AE + +++
Sbjct: 125 HAARLDLIAKAYSTSQAEEYYNKLQSPATRQAASFPLLHCYVMERDVQKAETFMAQLQSH 184
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G V +N +M LY+ +Y++V S++ MK I +V SYN+W+++C + +
Sbjct: 185 GLPVDPHSFNEIMKLYVATCQYEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSV 244
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+ VF++M D+ V W+T+ T+A ++ K G +A+ L + E++++ R+ Y ++++
Sbjct: 245 QSVFQVMLNDETVKVGWSTYCTLANIFRKNGLNNEAQACLVKAEAKLSPAGRLGYSFVMT 304
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
Y ++ + V R+W +SV + Y A +S ++GDI E IF +W + +
Sbjct: 305 CYAALNDSDGVMRMWEASKSVPGRIPTAYYMAAMSCSIKVGDISQAECIFGKWEAGCRKH 364
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
D R++N+++ YV+ +KAE ++E+G PN +WE L EG+++ R++ +A+ C+
Sbjct: 365 DVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGACPNYKTWEILMEGYVQSRQMDKAVGCM 424
Query: 446 KGAFAAEGAKSWRPKPVNVINFF-KACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI-- 502
K + + WRP PV ++ K EE+ ++ +L++ Y SLI
Sbjct: 425 KKGLSLLKSCHWRP-PVELMEAIGKHFEEQGSADDAYRYIKVLQRFNLTSLPLYKSLIRA 483
Query: 503 ----GLTDEAVAENNKKNDEDSDEDSEMLL 528
+ V E K+ D DE+ + L+
Sbjct: 484 YINADVVPPNVLEMIAKDQIDMDEEMDRLI 513
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 224/432 (51%), Gaps = 18/432 (4%)
Query: 66 ERRPM-IKWNAIFRKLSLMDN--PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRY 122
ERR + W +++++S + P A+ +++W + R ++ ++ V+EL +F++
Sbjct: 40 ERRGLEPAWVPLYKRISKVSQGKPPGTVAAEMDEWLRQRRRPSQLQVLAYVRELTRFKKN 99
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGAL 182
+ ALE+ DWM +RG LS A++LDLI+KVHG+ +AE++F S+PD K + Y L
Sbjct: 100 ESALELLDWMESRGAN--LSPGHQAMRLDLISKVHGIQAAEEYFWSIPDISKSVKTYSCL 157
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
LN Y + + +KM+ K L YN +M LY K + +++ S EM+E GI
Sbjct: 158 LNCYGKHGLAYKGLEFYEKMKAKSIVPDKLVYNYLMILYQKAGQPEKILSTFEEMRESGI 217
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
D ++Y + S + + E V L ++ K +W+ ++ MA YIK+ KAE
Sbjct: 218 SADKFAYFTLIESYITMNDLDAAEKV--LAELQKVAPVHWSLYTLMANNYIKLKLFGKAE 275
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
++++ E + D ++ LLSL+ G EV RVW +S F N Y M+ +L
Sbjct: 276 VAIKKAEEGMDKADLRSWYALLSLHAHCGNSTEVKRVWKSLKSTFKKCLNRSYLVMLQAL 335
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
+ I D E +++IF+EW S YD RIAN+++ Y+ +G D+AEA S + +G
Sbjct: 336 SMIDDFESLQQIFQEWQSSHEHYDKRIANVVIKAYLDKGMIDEAEAIRQSTMAQG----- 390
Query: 423 TSWE-----TLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
W AE ++ + + AL L+ A A+ W P V F K EE +D
Sbjct: 391 -HWHEGMVCIFAEFYLDKSDVNAALEILRDAKNMVMARKWVPSKELVSRFLKHYEESNDA 449
Query: 478 GSKEAFVALLRQ 489
E+F+ L++
Sbjct: 450 SGAESFLECLKK 461
>gi|223949005|gb|ACN28586.1| unknown [Zea mays]
Length = 396
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 199/352 (56%), Gaps = 15/352 (4%)
Query: 145 DAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK--- 201
D AI LDLI ++HGV +AE +F +L D K + YGALLN Y R ELL+DK
Sbjct: 13 DHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTR-------ELLVDKALA 65
Query: 202 ----MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
M++ G+ +LPYN +M LY +I +++ V S+++EMK GI D +SY I ++S G
Sbjct: 66 HFRNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINSYG 125
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
++ +E E M+ + + +W T++ +A+ YIK EKA +L + E+++ +D
Sbjct: 126 TRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEAKLDKQDP 185
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y +L+SLYG++G K E R+W + S N Y M+S L ++ +I E + +E
Sbjct: 186 DAYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAEDLLKE 245
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
W S ++S+D R+ N++++ Y ++ DKAE + +++G P STSW +A G+ +
Sbjct: 246 WESSQNSFDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAIGYAEKGD 305
Query: 438 ILEALSCLKGAFAAEGAKS-WRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
+ +A K A + + W P+P + K +E ++ EAFV+LL+
Sbjct: 306 VAKAYEMTKNALSVHAPNTGWIPRPSMLEMILKYLGDEGEVKDVEAFVSLLK 357
>gi|357137419|ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Brachypodium distachyon]
Length = 513
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 216/404 (53%), Gaps = 11/404 (2%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
A+ + W + +++ +L R V +LR+ RRY HALE+ WM++R + LS D A +L
Sbjct: 59 AAAIERWAQERGHVSRPDLRRAVSQLRRARRYDHALEILSWMDSRKD-LNLSPLDHAARL 117
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
DLIAKVHG AE+++ L + LL+ YV R AE + ++ G V
Sbjct: 118 DLIAKVHGTCHAEEYYKKLRNAACREAASFPLLHCYVAERNVQKAESFMASLQSIGLPVD 177
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
+N M+ LY+ ++++ +++ MK I +V SYN+W+++C G ++ VF+
Sbjct: 178 PHSFNEMLKLYVATCQFEKALAVIDLMKRSNIPRNVLSYNLWMNACSVLG-VASVQSVFK 236
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M D V W+TF T+A ++IK G KA LR E++++ R R+ Y ++++ Y +
Sbjct: 237 EMVNDGTVEVGWSTFCTLANIFIKHGLNSKALACLRTAETKLSPRQRLGYSFVMTCYARL 296
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW-LSVKSSYDPRI 389
+ V R+W +SV + + Y + I ++GDI E IF W D R+
Sbjct: 297 DDSDGVMRLWEASKSVPGRIPSANYMSTIICSIKVGDIAQAEWIFGSWEAECGRKNDVRV 356
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAF 449
+N+++ YV+ G +KAE ++E+G PN +WE L EG ++ R++ +A++ +K A
Sbjct: 357 SNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILLEGFVQSRQMDKAVNAIKKAL 416
Query: 450 AAEGAKSWRPKPVNVI----NFFKACEEESDMGSKEAFVALLRQ 489
+ + WRP P+ ++ FF EE ++ ++ +L++
Sbjct: 417 SLSKSCHWRP-PLELVEAIATFF---EEHGNVDDANRYIKVLQK 456
>gi|242066836|ref|XP_002454707.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
gi|241934538|gb|EES07683.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
Length = 527
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 226/419 (53%), Gaps = 5/419 (1%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ +A+ ++ W + +++ EL R + LR+ RRY+HALE++ WM + LS+ D
Sbjct: 68 PRGAAAAAIDRWARESVHISQPELRRAIAMLRRARRYEHALEIFSWMESCNSVL-LSSWD 126
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A +LDLIAK +G + AE+++ L + LL+ YV R AE + +++
Sbjct: 127 HAARLDLIAKAYGTSQAEEYYNKLQSPAARQAASFPLLHCYVTERNVQKAETFMAQLQSC 186
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G V +N +M LY+ +Y++ S++ MK I +V SYN+W++ C +
Sbjct: 187 GLPVDPHSFNEIMKLYIATFQYEKALSVIDLMKRNNIPRNVLSYNLWMNVCAEVSGVAPV 246
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+ VF+ M D+ V W+T+ T+A ++ K G KA+ LR+ E++++ R+ Y ++++
Sbjct: 247 QSVFQEMLNDETVEVGWSTYCTLANIFRKNGLNTKAQACLRKAETKLSPTGRLGYSFVMT 306
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGY-HAMISSLARIGDIEGMEKIFEEWLSVKSS 384
Y ++ + V R+W +SV + Y AM+ S+ ++GDI E IF W +
Sbjct: 307 CYAALNDSDGVMRLWEASKSVPGRIPAANYMTAMLCSI-KVGDISQAEWIFGSWEAGCRK 365
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
+D R++N+++ YV+ +KAE ++E+G +PN +WE L EG+++ R++ +A+ C
Sbjct: 366 HDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGARPNYKTWEILMEGYVQSRQMDKAVGC 425
Query: 445 LKGAFAAEGAKSWRPKPVNVINFF-KACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
+K + + WRP P+ ++ K EE+ ++ +L++ Y SLI
Sbjct: 426 MKKGLSLLKSCHWRP-PLELMEAIGKHFEEQGSADDAYRYIKVLQRFNLTSLPLYKSLI 483
>gi|115449217|ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497238|dbj|BAD19283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537919|dbj|BAF10302.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|125584008|gb|EAZ24939.1| hypothetical protein OsJ_08720 [Oryza sativa Japonica Group]
Length = 517
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 219/414 (52%), Gaps = 9/414 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGA 181
Y+ ALE+ WM++ + FRLS SD ++LDLIAKVHG + AE+++ L +
Sbjct: 97 YEQALEILSWMDSHND-FRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTAASKKAASFP 155
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LL+ YV R AE + +++ G V +N +M LY+ +Y++V S++ MK
Sbjct: 156 LLHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNN 215
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
I +V SYNIW+++C ++ F+ M D V W+T+ T+A ++ K GQ KA
Sbjct: 216 IPRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKA 275
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
LR E++++ R+ Y ++++ Y ++ ++ V R+W + V + Y + +
Sbjct: 276 LACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVC 335
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L ++GDI E F W + +D R++N+++ YV+ G +KAE ++E+G PN
Sbjct: 336 LIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPN 395
Query: 422 STSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVIN-FFKACEEESDMGSK 480
+WE L EG ++ +++ +A++ +K + WRP P+ ++ K EE+ +
Sbjct: 396 YKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRP-PLELLEAIAKYFEEQGSVEDA 454
Query: 481 EAFVALLRQPGYRKEKDYMSLIG--LTDEAVAENNKK----NDEDSDEDSEMLL 528
+ F+ +L++ Y SL+G + + V +N + + D DE+ + L+
Sbjct: 455 DRFIKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLI 508
>gi|125541465|gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
Length = 517
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 219/414 (52%), Gaps = 9/414 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGA 181
Y+ ALE+ WM++ + FRLS SD ++L+LIAKVHG + AE+++ L +
Sbjct: 97 YEQALEILSWMDSHND-FRLSPSDHMVRLELIAKVHGTSQAEEYYRKLSTAASKKAASFP 155
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LL+ YV R AE + +++ G V +N +M LY+ +Y++V S++ MK
Sbjct: 156 LLHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNN 215
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
I +V SYNIW+++C ++ F+ M D V W+T+ T+A ++ K GQ KA
Sbjct: 216 IPRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKA 275
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
LR E++++ R+ Y ++++ Y ++ ++ V R+W + V + Y + +
Sbjct: 276 LACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVC 335
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L ++GDI E F W + +D R++N+++ YV+ G +KAE ++E+G PN
Sbjct: 336 LIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPN 395
Query: 422 STSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVIN-FFKACEEESDMGSK 480
+WE L EG ++ +++ +A++ +K + WRP P+ ++ K EE+ +
Sbjct: 396 YKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRP-PLELLEAIAKYFEEQGSVEDA 454
Query: 481 EAFVALLRQPGYRKEKDYMSLIG--LTDEAVAENNKK----NDEDSDEDSEMLL 528
+ F+ +L++ Y SL+G + + V +N + + D DE+ + L+
Sbjct: 455 DRFIKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLI 508
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 135/409 (33%), Positives = 220/409 (53%), Gaps = 16/409 (3%)
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WM R LS D A +L+LI+KVHG+ A ++F ++P+ L++ + YG+LL Y A
Sbjct: 69 WMTER-RHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAE 127
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
AE L + MR G A +S YN MM LY +I + + V+SM M+E GI D+++ +
Sbjct: 128 RVEKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTID 186
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
+S+ E +E V E + ++ W +F+ + +++K G E+A ++ + E
Sbjct: 187 NLVSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERALQAFQESEK 244
Query: 311 RITGR--DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-VTNLGYHAMISSLARIGD 367
RIT R RV Y +LL++Y + EV R+W++YRS P N Y IS L ++ D
Sbjct: 245 RITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMND 304
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
I G EK +EEW S +D R+ N++++ Y KEG +KAEA + I++G S +W
Sbjct: 305 IVGAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTLFSNTWYK 364
Query: 428 LAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNV---INFF---KACEEESDMGS-K 480
LA G+ + ++ +A K A A+ + W+P NV IN+F K E +M S
Sbjct: 365 LAGGYFKVGQVSKAADLTKKALAS-ASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLL 423
Query: 481 EAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKNDEDSDEDSEMLLS 529
+ V L R + K Y++ G + + KK+ ++DE+++ +L+
Sbjct: 424 QRLVPLTRDVYHGLLKTYVN-AGEPASDLLDRMKKDGIEADEETDKILA 471
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 186/328 (56%), Gaps = 6/328 (1%)
Query: 139 FRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELL 198
F + DAA++L LI +V G+ AE++F L LK + YGA+LN VR + AE +
Sbjct: 7 FTFTTEDAAVRLGLIHRVRGLEEAENYFNKLSVKLKTKYTYGAILNGCVREKSVQKAEAV 66
Query: 199 IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGS 258
+ +MR+ G S PYN+++ LY + ++D++ ++ EM+ GI D Y+ +++ +
Sbjct: 67 MQEMREGGMTTSSFPYNILIILYSQTGDFDKIPPLMKEMERNGIAEDKYTLRNLIAASVA 126
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR-DR 317
+E + +LM+ + + +W ++ A Y+K+G +E A L ++E + R +
Sbjct: 127 ASDISGVERILKLMEENPELGLDWKLYAMAADAYLKIGSIETALTMLEKLEKWMAFRKKK 186
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
+++LLSLY G K+E+YR+WNLY+ + + Y MI SL ++ DIEG EKIFEE
Sbjct: 187 AVFNFLLSLYAKTGNKDELYRIWNLYKPSSESM-DTSYCCMIDSLTKLDDIEGAEKIFEE 245
Query: 378 WLS-VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
W S ++YD R+ N ++ Y G F+KAEA + +G P +++W +A+G++
Sbjct: 246 WESQCTTTYDFRVLNGLLVAYCNRGLFEKAEAAIEKAV-QGRTPYASTWHVMAKGYMEHD 304
Query: 437 RILEALSCLKGAFAAEGAKSWRPKPVNV 464
+I + + LK A + W+P P+ V
Sbjct: 305 QIPKTVEMLKRAVNV--GRDWKPDPILV 330
>gi|359497206|ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 128 VYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYV 187
+ WM+++ L D A++++LI KVHG+ E++F ++ LK +VY ALLN Y
Sbjct: 102 ISQWMSDK-RYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYIALLNCYA 160
Query: 188 RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY 247
+ AE ++ ++RD G+ +L YN +M +Y ++ +++++ ++ EM+EKGI D +
Sbjct: 161 LEKSVDKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKF 220
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
+ I LS+ + + ++ + M+ D + +W +++ +A Y+K+G V+K +++
Sbjct: 221 TLAIRLSAYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKK 280
Query: 308 VESRITGR-DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIG 366
+E I + V + LL LY +++E+ RVW LY+ + N GY AMISSL +
Sbjct: 281 LEELIDAKGSNVAFDNLLKLYAETRQRDELDRVWMLYKKK-EKIYNKGYMAMISSLLKFD 339
Query: 367 DIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWE 426
DI+ EK+ EEW S + SYD R+ N ++ Y ++G +KAEA N I+ +GG P +W
Sbjct: 340 DIDAAEKVLEEWESRRLSYDFRVPNFLIDAYCRKGLTEKAEALVNKILTKGGNPLVDTWF 399
Query: 427 TLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVAL 486
LA G++ + +I +A+ LK A +W+P + + E D+ F+
Sbjct: 400 YLANGYLEDSQIPKAVEALKKAVVV-CPPNWKPSKNTLATCLEYLEGNRDVEGAGEFIRF 458
Query: 487 LRQPG 491
L+ G
Sbjct: 459 LQNEG 463
>gi|297803972|ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
gi|297315706|gb|EFH46129.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 217/384 (56%), Gaps = 13/384 (3%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
+++++S + +P++ VL++W G +K EL ++KEL K++R+ HALEV WM++
Sbjct: 37 GLYKRISPLGDPKISIVPVLDEWRGEGNYTSKEELRGMIKELIKYKRFVHALEVSRWMSD 96
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN 194
R F LS +D +++LI++V G+ AE FF ++P +K V+ +LL+ Y R +
Sbjct: 97 R-MFFPLSLTDFGTRINLISRVCGLGEAEVFFENIPKDMKGIAVFSSLLSCYAREKSAEK 155
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A L++ M++ G ++ + YN+MM +Y ++ + +++ ++ EM++ G+ D ++ +I LS
Sbjct: 156 AAKLVEAMKEAGVSMDTRCYNLMMNMYYQMNVHGKLDDLMLEMEQNGVSFDQFTLSIRLS 215
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI-- 312
+ + + E +E E + +WT +S A ++K+ +++A L++ E +
Sbjct: 216 AYAAASNIEGIEKTIEKISSMSETAIDWTIYSAAANAFLKVELIDEATMMLKKCEEFVNE 275
Query: 313 -TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY---RSVFPGVTNLGYHAMISSLARIGDI 368
+G + +H LL LYG G+KE++ RVW + R VF N GY MISS + GDI
Sbjct: 276 DSGNE--AFHTLLKLYGETGRKEDLSRVWLRFKEERKVF----NSGYKIMISSALKFGDI 329
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
E +EK+F +W S K SYD RI NL++++Y ++ +KAE P ++ L
Sbjct: 330 ELVEKVFNQWESEKLSYDFRIPNLLINFYCEKDLTEKAELLLKKAEGNRVSPPMDAYICL 389
Query: 429 AEGHIRERRILEALSCLKGAFAAE 452
A ++ I +A ++ A + +
Sbjct: 390 ANIYLEGDEISKATEAIERAVSTQ 413
>gi|297729245|ref|NP_001176986.1| Os12g0527850 [Oryza sativa Japonica Group]
gi|255670359|dbj|BAH95714.1| Os12g0527850 [Oryza sativa Japonica Group]
Length = 313
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 161/257 (62%), Gaps = 3/257 (1%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ + R+L + P+ +A VL W + GR++ K++L RVV+ELRK+RR+KHALE+ +WM
Sbjct: 28 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 87
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+ E RL D A+ LDL+AKV G+ SAE FF +P+ K ALL+AYV+ R
Sbjct: 88 TQPE-MRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRD 146
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE ++++M GY +LP+N MM+LYM E ++V M+ E++ I D+ +YNIWL
Sbjct: 147 KAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWL 205
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+ C + S + E V++LMK D+ V P+W TFS + ++YI G K ++L +E R +
Sbjct: 206 TYCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRAS 264
Query: 314 GRDRVPYHYLLSLYGSV 330
++R Y LL+LY S+
Sbjct: 265 RKERAAYSSLLTLYASL 281
>gi|449438238|ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
gi|449478839|ref|XP_004155431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
Length = 406
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 192/337 (56%), Gaps = 3/337 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ + VL W G +T EL + KELRK +RYKHALE+ +WM + + LS SD
Sbjct: 68 PKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSHNQS-ELSDSD 126
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
AI++DL+ KV GV +AE +F LP K Y ALL+++ +++ AE L +KM++
Sbjct: 127 FAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLYEKMKES 186
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ +LP+N MMTLY I + ++V S+V ++K++ + D+++YN+W+SS + + + +
Sbjct: 187 DIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGV 246
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE-ESLRRVESRITGRDRVPYHYLL 324
+ + M + N NW + + +Y+K + +E S+ S I+ R+ + Y L+
Sbjct: 247 KQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQREWITYDLLI 306
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW-LSVKS 383
LY +G K+++ ++W R +T+ Y ++S + D++ + ++ ++W S +
Sbjct: 307 ILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVIDQWKQSTTT 366
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
+D N +++ +++ G +KA +F N +I++ +P
Sbjct: 367 DFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEP 403
>gi|255563224|ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538091|gb|EEF39702.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 426
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 188/341 (55%), Gaps = 3/341 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ + +++++W G ++T EL + ELRK +RYKHALE+ +WM E F L D
Sbjct: 86 PKRSATNIIHNWVSEGNTVTASELRNISNELRKLQRYKHALEISEWMVTNKE-FELMDFD 144
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A ++DL+ KV G+ +AE +F LP T+K Y ALL++Y + G AE L ++++
Sbjct: 145 YATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTALLHSYAGVKQLGKAEELYERIKGS 204
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ +L YN MMTLYM + + ++V +V E+K + I D+++YN+W+SSC + + +++
Sbjct: 205 NLSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFTYNLWISSCAAILNIDQV 264
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES-LRRVESRITGRDRVPYHYLL 324
+ + MK D N +W + +A +Y+K G + E S + E IT R+ + Y +L+
Sbjct: 265 TRILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVEAEKSITQREWITYDFLI 324
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW-LSVKS 383
LY + K++V ++W R +TN + ++SS +G ++ ++ ++W S +
Sbjct: 325 ILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGHLKEAGEVLDQWKKSTTT 384
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
+D + ++ + G + A F +IE P + +
Sbjct: 385 DFDLSACSRLLDAFSGSGLTEIANDFHMLLIERNCDPTNLT 425
>gi|242073288|ref|XP_002446580.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
gi|241937763|gb|EES10908.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
Length = 415
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 177/321 (55%), Gaps = 2/321 (0%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ + L+ W GR+ EL R+ ++L + RRYKHALEV DWM E LS SD ++
Sbjct: 77 ATAALDKWSGEGRAAPAAELRRIARDLSRVRRYKHALEVADWMKTHHES-DLSESDYGMR 135
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+DLI KV G ++AEDFF LP K Y ALL++Y R++M AE L ++M+D ++
Sbjct: 136 IDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDKAERLFERMKDANLSM 195
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+L YN MMTLY+ + E D+VE + E+K + + D+++YN+ +S+ + E +G+
Sbjct: 196 DALVYNEMMTLYISVGELDKVEIIAEELKRQNVSPDLFTYNLRVSAAAASMDLEGFKGIL 255
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+ M D WT + +A++Y+ Q+ + SL E++I+ R+ + Y +L+ L+
Sbjct: 256 DEMSKDPNSKEGWTLYRNLASVYVDASQLVGSGNSLVEAEAKISQREWITYDFLVILHAG 315
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS-SYDPR 388
+G +E + +W +T+ Y +ISS G ++ +I ++W K+ +D
Sbjct: 316 LGNQERIKDIWKSMVMTSQRMTSRNYICVISSYLMCGQLKDAGEIVDQWQRSKAPEFDIS 375
Query: 389 IANLMMSWYVKEGNFDKAEAF 409
N ++ + G D A+ F
Sbjct: 376 ACNRLLDALLSAGLTDTADRF 396
>gi|357163843|ref|XP_003579864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 176/322 (54%), Gaps = 2/322 (0%)
Query: 89 GSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI 148
+ L+ W GR+ EL RV ++L + RRYKHALEV +WM E LS +D +
Sbjct: 83 SATEALDRWAGEGRAAPAPELRRVARDLSRARRYKHALEVAEWMKTHHES-DLSENDYGV 141
Query: 149 QLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
++DLI KV G +AEDFF LP K Y ALL++Y R++M AE L ++M+D +
Sbjct: 142 RIDLITKVFGANAAEDFFEKLPSEAKSLEAYTALLHSYARSKMTDKAERLFERMKDADLS 201
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ L YN MMTLY+ + E D+V ++ E+K + + D+++YN+ +S+ + E +G+
Sbjct: 202 IDVLVYNEMMTLYISVGELDKVPAVAEELKRQNVSPDLFTYNLRISASAASMDLEIFKGI 261
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
+ M D N WT + +AT+Y+ Q+ + SL E++I+ R+ + Y +L+ L+
Sbjct: 262 LDEMSKDPNSNEGWTLYRNLATIYVNASQLVSSGNSLVEAEAKISQREWITYDFLILLHT 321
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS-SYDP 387
+G E V +W + +T+ Y ++SS G ++ ++I ++W K+ +D
Sbjct: 322 GLGNLERVKDIWKSMQMTSQRMTSRNYICVLSSYLMCGQLKDAKEIVDQWQRSKAPEFDI 381
Query: 388 RIANLMMSWYVKEGNFDKAEAF 409
N + + G D A++F
Sbjct: 382 SACNRLFDALLGAGFTDTADSF 403
>gi|356525847|ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 172/294 (58%), Gaps = 2/294 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ + +VL W G +T +L + KELR+ +RYKHALE+ +WM + E + LS SD
Sbjct: 57 PKRSATNVLQKWVLQGNPVTLSQLRDISKELRRSQRYKHALEISEWMVSH-EEYELSDSD 115
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A ++DL KV G+ +AE +F LP K Y ALL++Y A++ AE L +++D
Sbjct: 116 YAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEELYQRIKDS 175
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ +L YN MMTLYM + ++++V S+V E+K++ + D+++YN+W+S C + + +++
Sbjct: 176 NLSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISYCAAILNIDEV 235
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA-EESLRRVESRITGRDRVPYHYLL 324
+ + M N +W + +A +YI +G ++ A +L E RIT R + Y +L+
Sbjct: 236 RRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKRITQRQWITYDFLI 295
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
LYG +G K+++ ++WN R + + Y +ISS +G + + ++ ++W
Sbjct: 296 ILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVIDQW 349
>gi|224141193|ref|XP_002323959.1| predicted protein [Populus trichocarpa]
gi|222866961|gb|EEF04092.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 185/334 (55%), Gaps = 5/334 (1%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ +V++ W + G +++ EL + KELRK +R+KHALE+ +WM E F LS +D
Sbjct: 20 PKRSVTNVIDKWVREGNTVSSSELRHISKELRKSQRFKHALEISEWMVAH-EEFELSDTD 78
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A ++DL+ KV GV +AE +F LP K Y ALL++Y A++ AE +++
Sbjct: 79 HASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAKLIEKAEEFYKRIKGS 138
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+L YN MMTLYM + + ++V +V E+K + + D+++YN+W+SSC + + +K+
Sbjct: 139 NLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYNLWISSCAAALNIDKV 198
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV---ESRITGRDRVPYHY 322
+ + M D VN +W + + +Y+ G + AE S V E +IT R+ + Y +
Sbjct: 199 RRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVEAEKKITQREWITYDF 258
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW-LSV 381
L+ LY +GKK+++ ++W R +T+ + ++SS +G ++ + +I ++W S
Sbjct: 259 LVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGHLKEVGEIVDQWKQST 318
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +D N ++ G + A F +IE
Sbjct: 319 TTDFDISACNRLLDAISCLGLTEIANNFHMLLIE 352
>gi|388490914|gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 171/291 (58%), Gaps = 2/291 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ + ++L+ W G S+T EL + KELR+ +RYKHALE+ +WM E LS SD
Sbjct: 62 PKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITH-EEHGLSDSD 120
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A+++DL+ KV G+ +AE +F +LP K Y ALL++Y A+M AE L +++D
Sbjct: 121 YAMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDS 180
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ +L YN MMTLYM + + ++V S+V E+K++ + D+++YN+W+SSC + + +++
Sbjct: 181 NLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEV 240
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK-AEESLRRVESRITGRDRVPYHYLL 324
+ + M N +WT + +A +Y+ +++ + SL E RIT + Y +L+
Sbjct: 241 RRILDEMSHGADSNESWTRYLNLANVYVTASRLDNSSSNSLAETEKRITQSQWITYDFLI 300
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
LY +G K+++ ++WN R + N Y +IS+ +G ++ + ++
Sbjct: 301 ILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVVRLL 351
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 215/412 (52%), Gaps = 23/412 (5%)
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WM +R LS D A +LDLI+KVHG+ A ++F +P L+ + YG+LL YV A+
Sbjct: 52 WMTDR-RHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAK 110
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
AE KM++ G S Y MM LY++ + + V +M +M+EKG++ D +S
Sbjct: 111 AVDKAEEHFAKMQEMGM-TSSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVE 169
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPN-----WTTFSTMATMYIKMGQVEKAEESL 305
L+ + + E ++GV +++ DKA NP+ W ++ A++++K G A +L
Sbjct: 170 AMLA---AYIAAEDVQGVGKVL--DKA-NPHEKLVTWHGHASAASLFMKSGMQVGAVMAL 223
Query: 306 RRVESRITGR-DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
E RI+ + R+ Y +LL Y +G E R+W++Y+S P N Y + +S+L R
Sbjct: 224 VEAERRISPKSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVPPC-NTMYMSRLSALLR 282
Query: 365 IGDIEGMEKIFEEWLSVKSSY-DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
DI+G E +EW +V Y D R+ N+M+ Y +EG +KA A + I++G P +
Sbjct: 283 TNDIDGAEATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYAN 342
Query: 424 SWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAF 483
+W LA G + ++ EA+ + A + WRP NV+ ++ D+G+ E
Sbjct: 343 TWYKLAGGFFKTGQVPEAVDMTRKALDS-ATPPWRPDLANVLMSLNHFVDQKDVGAAEEM 401
Query: 484 VALLRQPGYRKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLLS 529
V+ L++ Y L+ G + E K++ ++DE++E +L+
Sbjct: 402 VSTLQKLVPLTRDVYHCLLKTYVRAGKPPSDLLERMKEDGLEADEETERILA 453
>gi|356554749|ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 399
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 172/294 (58%), Gaps = 2/294 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ + +VL W G +T +L + KELR+ +RYKHALE+ +WM + E + LS SD
Sbjct: 61 PKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVS-NEEYELSDSD 119
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A+++DL+ +V G+ +AE +F LP K Y ALL++Y A++ AE L +++D
Sbjct: 120 YAVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAEELYQRIKDS 179
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ +L YN MMTLYM + ++++V +V E+K++ + D+++YN+W+SSC + + +++
Sbjct: 180 NLSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWISSCAAILNIDEV 239
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA-EESLRRVESRITGRDRVPYHYLL 324
+ + M N +W + +A +YI + ++ A +L E RIT R + Y +L+
Sbjct: 240 RRILDEMSHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKRITQRQWITYDFLI 299
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
LYG +G K+++ ++WN + + Y +ISS +G + + ++ ++W
Sbjct: 300 ILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGLTKEVGEVIDQW 353
>gi|359484901|ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 184/341 (53%), Gaps = 3/341 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ +VL W G + EL + KELR+ +RYKHALE+ +WM + E F LS SD
Sbjct: 56 PKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSHDE-FELSDSD 114
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A+++DL+ +V G+ +AE +F LP K Y ALL++Y A++ AE L +++++
Sbjct: 115 NAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKES 174
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
++ L YN MMTLYM + + ++V +V E+K + + D+++YN+W+SSC + + +
Sbjct: 175 NVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGV 234
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ-VEKAEESLRRVESRITGRDRVPYHYLL 324
+ + M + + N W + +A +YI G V A S+ + T RD + Y +L+
Sbjct: 235 RRILKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSASNSVVEAGTNTTQRDWITYDFLI 294
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW-LSVKS 383
LY +G K+++ ++W + + + Y ++SS +G I+ + + +EW S +
Sbjct: 295 ILYAGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSSYVMLGHIKDVGIVIDEWKKSTTT 354
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
+D + ++ + + ++AE F +I + P S
Sbjct: 355 DFDISVFYRLLDAFAELRLIEEAETFHKLLIRKSCLPTDES 395
>gi|326504724|dbj|BAK06653.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523789|dbj|BAJ93065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 168/322 (52%), Gaps = 2/322 (0%)
Query: 89 GSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI 148
+ L W GR+ EL R+ ++L + RRYKHALEV +WM E LS +D +
Sbjct: 80 SATEALEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTHHES-DLSENDYGV 138
Query: 149 QLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
++DLI KV G +AEDFF LP K Y ALL++Y R++M AE L +M+D
Sbjct: 139 RIDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLP 198
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ L YN MMTLY+ + E D+V + E+K + + D+++YN+ +S+ + E +G+
Sbjct: 199 IDVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGI 258
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
+ M D N W + +A++Y+ Q+ + SL E++I+ R+ + Y L+ L+
Sbjct: 259 LDEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEAKISQREWITYDLLVILHA 318
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK-SSYDP 387
+G + V +W + +T+ Y ++S+ G ++ ++ ++W K +D
Sbjct: 319 GLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAEVVDQWQRSKVPEFDV 378
Query: 388 RIANLMMSWYVKEGNFDKAEAF 409
N + + G D A++F
Sbjct: 379 SACNRLFDALLAAGFTDTADSF 400
>gi|125548508|gb|EAY94330.1| hypothetical protein OsI_16098 [Oryza sativa Indica Group]
Length = 430
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 172/321 (53%), Gaps = 2/321 (0%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ + L W GR+ + EL + ++L + RYKHALEV +WM E LS +D ++
Sbjct: 92 ATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHES-DLSENDYGMR 150
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+DLI +V G +AEDFF LP ++ Y ALL++Y R++M AE L +M+D ++
Sbjct: 151 IDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSM 210
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+ L YN MMTLY+ + E D+V + E+K + D+++YN+ +S+ + E +G+
Sbjct: 211 NILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGIL 270
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+ M D N W + +A +Y+ GQ+ + SL E++I+ R+ + Y +L+ L+
Sbjct: 271 DEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISQREWITYDFLVILHTG 330
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS-SYDPR 388
+G ++ + +W +T+ Y ++SS G ++ ++ ++W K+ +D
Sbjct: 331 LGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDIS 390
Query: 389 IANLMMSWYVKEGNFDKAEAF 409
N + ++ G D A +F
Sbjct: 391 ACNRLFDAFLNAGFTDTANSF 411
>gi|326520694|dbj|BAJ92710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 167/322 (51%), Gaps = 2/322 (0%)
Query: 89 GSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI 148
+ L W GR+ EL R+ ++L + RRYKHALEV +WM E LS +D +
Sbjct: 80 SATEALEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTHHES-DLSENDYGV 138
Query: 149 QLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
++DLI KV G +AEDFF LP K Y ALL++Y R++M AE L +M+D
Sbjct: 139 RIDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLP 198
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ L YN MMTLY+ + E D+V + E+K + + D+++YN+ +S+ + E +G+
Sbjct: 199 IDVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGI 258
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
+ M D N W + +A++Y+ Q+ + SL E++I+ R+ + Y L+ L+
Sbjct: 259 LDEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEAKISQREWITYDLLVILHA 318
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK-SSYDP 387
+G + V +W + +T+ Y ++S+ G ++ + ++W K +D
Sbjct: 319 GLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAGVVDQWQRSKVPEFDV 378
Query: 388 RIANLMMSWYVKEGNFDKAEAF 409
N + + G D A++F
Sbjct: 379 SACNRLFDALLAAGFTDTADSF 400
>gi|21740710|emb|CAD40831.1| OSJNBa0086B14.3 [Oryza sativa Japonica Group]
gi|116310079|emb|CAH67100.1| H0818E04.17 [Oryza sativa Indica Group]
Length = 430
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 172/321 (53%), Gaps = 2/321 (0%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ + L W GR+ + EL + ++L + RYKHALEV +WM E LS +D ++
Sbjct: 92 ATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHES-DLSENDYGMR 150
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+DLI +V G +AEDFF LP ++ Y ALL++Y R++M AE L +M+D ++
Sbjct: 151 IDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSM 210
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+ L YN MMTLY+ + E D+V + E+K + D+++YN+ +S+ + E +G+
Sbjct: 211 NILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGIL 270
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+ M D N W + +A +Y+ GQ+ + SL E++I+ R+ + Y +L+ L+
Sbjct: 271 DEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITYDFLVILHTG 330
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS-SYDPR 388
+G ++ + +W +T+ Y ++SS G ++ ++ ++W K+ +D
Sbjct: 331 LGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDIS 390
Query: 389 IANLMMSWYVKEGNFDKAEAF 409
N + ++ G D A +F
Sbjct: 391 ACNRLFDAFLNAGFTDTANSF 411
>gi|125590560|gb|EAZ30910.1| hypothetical protein OsJ_14991 [Oryza sativa Japonica Group]
Length = 471
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 172/321 (53%), Gaps = 2/321 (0%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ + L W GR+ + EL + ++L + RYKHALEV +WM E LS +D ++
Sbjct: 133 ATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHES-DLSENDYGMR 191
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+DLI +V G +AEDFF LP ++ Y ALL++Y R++M AE L +M+D ++
Sbjct: 192 IDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSM 251
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+ L YN MMTLY+ + E D+V + E+K + D+++YN+ +S+ + E +G+
Sbjct: 252 NILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGIL 311
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+ M D N W + +A +Y+ GQ+ + SL E++I+ R+ + Y +L+ L+
Sbjct: 312 DEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITYDFLVILHTG 371
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS-SYDPR 388
+G ++ + +W +T+ Y ++SS G ++ ++ ++W K+ +D
Sbjct: 372 LGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDIS 431
Query: 389 IANLMMSWYVKEGNFDKAEAF 409
N + ++ G D A +F
Sbjct: 432 ACNRLFDAFLNAGFTDTANSF 452
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 206/386 (53%), Gaps = 18/386 (4%)
Query: 66 ERRPMIKWNAIFRKLSLMDNPQLGSAS-VLNDWEKGGR--SLTKWELCRVVKELRKFRRY 122
++RP+ + R L L D GS S VL++W + GR ++ +L + ++L K +R
Sbjct: 42 DKRPLGR-----RLLELGDAAGEGSVSRVLDEWVREGREEAIAAADLAKCARDLHKVKRD 96
Query: 123 KHALEVYDWM-NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDR--RVY 179
HALE+ DWM N +G ++ + A+ L+L+ V+G+ +AE++F +P +D+ R Y
Sbjct: 97 AHALELMDWMVNTKG--MSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTY 154
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
GALLN Y A+M A + +M + G + N +M LY+++ ++ +V ++ EMKE
Sbjct: 155 GALLNCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKVANLFDEMKE 214
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+ ++ D + I + S + + ++ F M + V W+ F T+ ++Y+ G VE
Sbjct: 215 RNVQPDELTCCILMRSHAAHNKIDTVKETFYNMSL-LDVPKQWSIFRTLGSIYMNAGMVE 273
Query: 300 KAEESLRRVESRITGRD--RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP-GVTNLGYH 356
+AE + R + G D R P+++L+ + S+G V RVW + F TN Y
Sbjct: 274 EAELAFMRAQE-FLGFDHGRHPFYFLMRQFASIGNLRGVNRVWKDIKMTFSYNRTNFSYL 332
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
M+ L ++GD + M++I++EW +YDPR+ N++ +++ G ++AE + + E
Sbjct: 333 LMLQCLYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKER 392
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
GG + + E E ++ + AL
Sbjct: 393 GGDFDFETCELFREHYLGKGDTTSAL 418
>gi|168063926|ref|XP_001783918.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664548|gb|EDQ51263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 198/396 (50%), Gaps = 2/396 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
PQ ++ +W G +L K L ++ LR+ +RYK A+E+ DWM+ + + +D
Sbjct: 1 PQKSVVPLIKEWLNEGYALDKRVLVSILIRLRRRQRYKQAMEISDWMSEE-KNIKWEMAD 59
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
+++DL AK+ A AE P K Y LL Y +M A+ L++K++
Sbjct: 60 NIVRIDLKAKMKQFAVAEQLLEDSPPEFKTELAYHTLLRNYADYQMAQKADALLEKLKGT 119
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G +N MM LY + ++V ++++MK G+ DVY+YNI + G E M
Sbjct: 120 GILTLPFAFNQMMLLYKRKGMMNKVTEILADMKTHGVPKDVYTYNILMDVKARSGDIEGM 179
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E +FE + D+ V + TF T+AT + G ++KA L+ +E R+R Y L+S
Sbjct: 180 EKIFEELSADENVKADAATFGTLATFCVHAGLLDKARSYLKEMEEGDVFRNRSAYDILIS 239
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
YG+VG +E V RVW +S P V+N Y +I + ++G +E E+++ K
Sbjct: 240 QYGAVGDQEGVERVWEKVKS-GPVVSNRSYITVIEAFGKLGMVEKAEELYGIMSKSKGLI 298
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
R N ++S Y ++G +KAE +++ G K N+ ++ L G+++ ++ +AL+ +
Sbjct: 299 LSRQFNSLLSAYARQGLMEKAEKLVEDMVKLGRKKNAVTYHHLVTGYLKTDQLDKALAVM 358
Query: 446 KGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKE 481
K A R +I+ A E D+ S E
Sbjct: 359 KEAQGDSKQGRSRLWVETLISVLDAYAERGDVISAE 394
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 17/263 (6%)
Query: 148 IQLDLIAKVHGVASAEDFF--LSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRD 204
I +D+ A+ + E F LS + +K D +G L V A + A + +M +
Sbjct: 165 ILMDVKARSGDIEGMEKIFEELSADENVKADAATFGTLATFCVHAGLLDKARSYLKEMEE 224
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
+ Y+++++ Y + + + VE + ++K G + SY + + G G EK
Sbjct: 225 GDVFRNRSAYDILISQYGAVGDQEGVERVWEKVKS-GPVVSNRSYITVIEAFGKLGMVEK 283
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
E ++ +M K + + F+++ + Y + G +EKAE+ + + ++ V YH+L+
Sbjct: 284 AEELYGIMSKSKGLILS-RQFNSLLSAYARQGLMEKAEKLVEDMVKLGRKKNAVTYHHLV 342
Query: 325 SLYGSVGKKEEVYRVWNLYRS-VFPGVTNLGYHAMISSL---ARIGDIEGMEKIFEEWLS 380
+ Y + ++ V + G + L +IS L A GD+ EK F++
Sbjct: 343 TGYLKTDQLDKALAVMKEAQGDSKQGRSRLWVETLISVLDAYAERGDVISAEKQFQD--- 399
Query: 381 VKSSYDPR----IANLMMSWYVK 399
+K +Y PR + N+++ Y+K
Sbjct: 400 IKKAY-PRPNIQVYNILLKAYIK 421
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 205/386 (53%), Gaps = 18/386 (4%)
Query: 66 ERRPMIKWNAIFRKLSLMDNPQLGSAS-VLNDWEKGGR--SLTKWELCRVVKELRKFRRY 122
++RP+ + R L L D GS S VL++W + GR ++ +L + ++L K +R
Sbjct: 42 DKRPLGR-----RLLELGDAAGEGSVSRVLDEWVREGREEAIAAADLAKCARDLHKVKRD 96
Query: 123 KHALEVYDWM-NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDR--RVY 179
HALE+ DWM N +G ++ + A+ L+L+ V+G+ +AE++F +P +D+ R Y
Sbjct: 97 AHALELMDWMVNTKG--MSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTY 154
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
GALLN Y A+M A + +M + G + N +M LY+++ ++ + ++ EMKE
Sbjct: 155 GALLNCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKAANLFDEMKE 214
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+ ++ D + I + S + + ++ F M + V W+ F T+ ++Y+ G VE
Sbjct: 215 RNVQPDELTCCILMRSHAAHNKIDTVKETFYNMSL-LDVPKQWSIFRTLGSIYMNAGMVE 273
Query: 300 KAEESLRRVESRITGRD--RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP-GVTNLGYH 356
+AE + R + G D R P+++L+ + S+G V RVW + F TN Y
Sbjct: 274 EAELAFMRAQE-FLGFDHGRHPFYFLMRQFASIGSLRGVNRVWKDIKMTFSYNRTNFSYL 332
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
M+ L ++GD + M++I++EW +YDPR+ N++ +++ G ++AE + + E
Sbjct: 333 LMLQCLYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKER 392
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
GG + + E E ++ + AL
Sbjct: 393 GGDFDFETCELFREHYLGKGDTTSAL 418
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 155/276 (56%), Gaps = 7/276 (2%)
Query: 199 IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGS 258
+ KMR+ G+ L YN M+ LY + +++++ ++ EM+E GI D ++YNI +++ +
Sbjct: 1 MQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAA 60
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR- 317
ME + M+ D V +W T+ + Y K G E + L++ E I + +
Sbjct: 61 ASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFIGDKQKW 120
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
+ Y YL++LY ++G K+EVYRVWNLY ++ N GY +ISSL ++ DI+G E+I +E
Sbjct: 121 LAYQYLMTLYAAIGNKDEVYRVWNLYTNLQKRF-NSGYLCIISSLMKLDDIDGAERILKE 179
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
W S +S+D RI N+M++ Y +G DKAEA+ N +IE G +P + +W+ LA G+
Sbjct: 180 WESGDTSFDFRIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEANTWDLLASGYHSNGL 239
Query: 438 ILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
+ LK A + W+PK + AC E
Sbjct: 240 TNKVAETLKKAISV-SPPHWKPK----YHILAACLE 270
>gi|356565994|ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 193/407 (47%), Gaps = 42/407 (10%)
Query: 95 NDWEKGGRSLT----KWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
+D + GR T KWE+ +K+L + Y+ AL++ + M R + D AI L
Sbjct: 49 DDQRQSGRRSTWRRRKWEVNDTLKKLDDRKLYQLALKLSETMAKRN--MIKTVRDHAIHL 106
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
DL+AK G+ +A+++F++LP++ K+ +GA+LN Y + M AE ++KM++ +
Sbjct: 107 DLLAKARGITAAKNYFVNLPESAKNHLCHGAILNCYCKEPMIEKAEGFMEKMKELSLPLS 166
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
S+PYN ++ LY K+ + ++V S++ EMK I LD Y+YN+W+ + + +E V +
Sbjct: 167 SMPYNSLIMLYTKVGQPEKVSSLIQEMKTSNIMLDSYTYNVWMRALAAVNDISSVERVHD 226
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M +L +E R +D Y +L++ YG
Sbjct: 227 EMM------------------------------ALTELEKRNAFKDLTAYQFLITFYGXT 256
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
EV+RVW R FP N+ Y MI L + D+ G EK F E +YD R+
Sbjct: 257 SNLYEVFRVWRSLRLAFPKTANISYLNMIRVLVKSKDLLGEEKCFXEXECGCPTYDIRVV 316
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
N+++ Y K +KAE G KPN + E + ++++ + CL A +
Sbjct: 317 NVLIRAYAKLDMLEKAEELKEHARRRGAKPNGKTLEIFMDYYLQKGNFKSTVDCLDEAIS 376
Query: 451 AE--GAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ----PG 491
+ W P + + E+E D+ E F+ +L++ PG
Sbjct: 377 MGRWNGEKWVPXSKIIDIMMRNFEQEKDVDGAEEFLEILKKSMESPG 423
>gi|255581582|ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528792|gb|EEF30799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 300
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 158/262 (60%), Gaps = 2/262 (0%)
Query: 65 FERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKH 124
F R N ++R++S + +P++ +L+ W + G+S+ K +L +KELR +RY H
Sbjct: 40 FRERGKDNLNQLYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQVFIKELRYCKRYTH 99
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
ALE+ WM+++ F L++ D AI+LDL++KV G+ AE +F ++P LK VY ALLN
Sbjct: 100 ALEISMWMSDK-RYFALTSRDVAIRLDLMSKVLGIEQAEKYFENVPQKLKVLEVYNALLN 158
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
Y A+ AE ++ MRD G+A +L YNVM+ L+ + + ++E+++ EM+E GI
Sbjct: 159 CYAYAKSVDKAEAVMQNMRDLGFAGKTLTYNVMLNLHYQTGNFKKLEALMLEMEENGIAY 218
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
D ++ I LS+ + ++ME + M+ D V +W ++ +A Y K G ++KA E
Sbjct: 219 DRFTLGIQLSAYAAICDIQRMEKIMSRMESDANVVTDWCNYAIVANGYRKAGLMDKALEM 278
Query: 305 LRRVESRITGRDR-VPYHYLLS 325
L++ E ITG+ R Y++LL+
Sbjct: 279 LKKSEGLITGKKRSSAYNFLLT 300
>gi|413950397|gb|AFW83046.1| hypothetical protein ZEAMMB73_939845 [Zea mays]
Length = 453
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 178/346 (51%), Gaps = 37/346 (10%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVY 179
RRY+ ALE++ WM + RLS+ D A +LDLIAK + + AE+++ L +
Sbjct: 122 RRYEQALEIFSWMES-CSSLRLSSWDHAARLDLIAKAYSTSQAEEYYNKLQSPATRQAAS 180
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
LL+ YV R ++++V S++ MK
Sbjct: 181 FPLLHCYVMER-----------------------------------DHEKVLSVIDLMKR 205
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
I +V SYN+W+++C + ++ VF++M D+ V W+T+ T+A ++ K G
Sbjct: 206 NNIHRNVLSYNLWMNACAEVSGVDSVQSVFQVMLNDETVKVGWSTYCTLANIFRKNGLNT 265
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
+A+ L + E++++ R+ Y ++++ Y ++ + V R+W +SV + Y A +
Sbjct: 266 EAQACLVKAEAKLSPTGRLGYSFVMTCYAALNDSDGVMRMWEASKSVPGRILTAYYMAAM 325
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
S ++GDI E IF +W + +D R++N+++ YV+ +KAE ++E+G
Sbjct: 326 SCSIKVGDISQAECIFGKWEAGCRKHDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGAC 385
Query: 420 PNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVI 465
PN +WE L EG+++ R++ +A+ C+K + + WRP PV ++
Sbjct: 386 PNYKTWEILMEGYVQSRQMDKAVGCMKKGLSLLKSCHWRP-PVELM 430
>gi|18415979|ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis thaliana]
gi|27311913|gb|AAO00922.1| putative protein [Arabidopsis thaliana]
gi|332004012|gb|AED91395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 167/301 (55%), Gaps = 3/301 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ + +VL W G +T EL + KELR+ RRYKHALEV +WM E ++S +D
Sbjct: 67 PKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH-EESKISDAD 125
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKM-RD 204
A ++DLI+KV G+ +AE +F L K Y +LL+AY ++ AE L ++
Sbjct: 126 YASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIES 185
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
++ YN MMTLYM + + ++V ++ +K+K + D+++YN+WLSSC + + ++
Sbjct: 186 DSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDE 245
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL-RRVESRITGRDRVPYHYL 323
+ + E M+ D + N W + + ++YI +V AE +L E I+ R+ + Y +L
Sbjct: 246 LRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFL 305
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ L+ +G K + ++W R+ +++ Y ++SS +G + E+I +W K+
Sbjct: 306 MILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKT 365
Query: 384 S 384
+
Sbjct: 366 T 366
>gi|21592522|gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 167/301 (55%), Gaps = 3/301 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ + +VL W G +T EL + KELR+ RRYKHALEV +WM E ++S +D
Sbjct: 67 PKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH-EESKISDAD 125
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKM-RD 204
A ++DLI+KV G+ +AE +F L K Y +LL+AY ++ AE L ++
Sbjct: 126 YASRIDLISKVFGIDAAERYFEGLHIDSKTAETYTSLLHAYAASKQTERAEALFKRIIES 185
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
++ YN MMTLYM + + ++V ++ +K+K + D+++YN+WLSSC + + ++
Sbjct: 186 DSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDE 245
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL-RRVESRITGRDRVPYHYL 323
+ + E M+ D + N W + + ++YI +V AE +L E I+ R+ + Y +L
Sbjct: 246 LRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFL 305
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ L+ +G K + ++W R+ +++ Y ++SS +G + E+I +W K+
Sbjct: 306 MILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKT 365
Query: 384 S 384
+
Sbjct: 366 T 366
>gi|414586983|tpg|DAA37554.1| TPA: hypothetical protein ZEAMMB73_139718 [Zea mays]
Length = 423
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 175/335 (52%), Gaps = 19/335 (5%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ + L W GR EL R+ ++L + RRYKHALEV DWM E LS +D ++
Sbjct: 70 ATAALEKWSSEGRDAPTAELRRIARDLTRVRRYKHALEVADWMKTHHES-DLSENDYGMR 128
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+DLI KV G ++AEDFF LP K Y ALL++Y R++M AE L ++M+D +
Sbjct: 129 IDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDRAERLFERMKDASLPM 188
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+L YN MMTLY+ + E +VE++ E+K + + D+++YN+ S+ + E V
Sbjct: 189 DALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYNLRASAAAASMDLEGFRAVL 248
Query: 270 ELMKVD--KAVNPNWTTFSTMATMYIKMGQVEKAEES--LRRVESRITGRDRVPYHYLLS 325
+ M D + W + +A++Y+ GQ+ + S + E+RI+ R+ + Y +L+
Sbjct: 249 DEMSRDPKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVEAGEARISQREWITYDFLVI 308
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPG----------VTNLGYHAMISSLARIGDIEGMEKIF 375
L+ +G+ E + +W RS+ +T+ Y ++SS G +E ++
Sbjct: 309 LHAGLGRPERIRDIW---RSMVATSQSQSQQQQRMTSRNYVCVVSSYLACGRLEDAGEVV 365
Query: 376 EEWLSVKS-SYDPRIANLMMSWYVKEGNFDKAEAF 409
++W K+ +D N ++ ++ G D A F
Sbjct: 366 DQWQRSKAPEFDVSACNRLLDALLRAGLADAAGRF 400
>gi|15217811|ref|NP_174123.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322989|gb|AAG51479.1|AC069471_10 hypothetical protein [Arabidopsis thaliana]
gi|332192782|gb|AEE30903.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 179/366 (48%), Gaps = 16/366 (4%)
Query: 49 VIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWE 108
VI SMS + +G+ P +A+ R ++ VL W + G +
Sbjct: 24 VITVSMSWLKIHGSC-----PHRITDALHRNAQII--------PVLEQWRQQGNQVNPSH 70
Query: 109 LCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLS 168
+ ++K+LR + AL+V +WM+ + + L D A +L LI V G+ AE FF S
Sbjct: 71 VRVIIKKLRDSDQSLQALQVSEWMS-KEKICNLIPEDFAARLHLIENVVGLEEAEKFFES 129
Query: 169 LPDTLKDRRVYGALLNAYVRA-RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
+P + VY +LLN+Y R+ + AE KMRD G + +PYN MM+LY +K
Sbjct: 130 IPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNR 189
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
++VE ++ EMK+ + D + N L + +ME + + W T
Sbjct: 190 EKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLD 249
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRD-RVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
MA Y++ KA + LR E + + + Y +L+ LYG G +EEV RVW LY+S
Sbjct: 250 MAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSK 309
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
N GY +I SL ++ DI G E+I++ W S+ +D RI ++ S Y G +KA
Sbjct: 310 IGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKA 369
Query: 407 EAFFNS 412
E NS
Sbjct: 370 EKLMNS 375
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 119/299 (39%), Gaps = 102/299 (34%)
Query: 98 EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVH 157
E+ G + +L ++K LR +++ AL+V +WM + + L D A +L L V
Sbjct: 392 EQWGDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEK-QVCNLYLEDYAARLYLTENVL 450
Query: 158 GVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
G+ AE +F ++P+ +KD VY ALL++Y ++ DK
Sbjct: 451 GLEEAEKYFENIPENMKDYSVYVALLSSYAKS--------------DKNLG--------- 487
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ V+ ++ EM+E + D+ + N L ++ + ME
Sbjct: 488 ----------NMVDEILREMEENNVDPDLITVNHVLKVYAAESKIQAME----------- 526
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK-KEEV 336
M+++ VE +YG V + K EV
Sbjct: 527 -------------MFMRRWAVE--------------------------VYGDVARCKREV 547
Query: 337 YRVWNLYRS-----------VFPGVTNL------GYHAMISSLARIGDIEGMEKIFEEW 378
+ +W+ ++ P VT L GY +ISSL ++ D++G+EK++ EW
Sbjct: 548 HNLWDECKNNKEEEVEDGKKRLPVVTTLLKMDDDGYRTVISSLLKLDDVQGVEKVYGEW 606
>gi|193806501|sp|Q9C7F1.2|PPR61_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g28020
Length = 566
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 180/366 (49%), Gaps = 16/366 (4%)
Query: 49 VIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWE 108
VI SMS + +G+ P +A+ R N Q+ VL W + G +
Sbjct: 24 VITVSMSWLKIHGSC-----PHRITDALHR------NAQI--IPVLEQWRQQGNQVNPSH 70
Query: 109 LCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLS 168
+ ++K+LR + AL+V +WM+ + + L D A +L LI V G+ AE FF S
Sbjct: 71 VRVIIKKLRDSDQSLQALQVSEWMS-KEKICNLIPEDFAARLHLIENVVGLEEAEKFFES 129
Query: 169 LPDTLKDRRVYGALLNAYVRA-RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
+P + VY +LLN+Y R+ + AE KMRD G + +PYN MM+LY +K
Sbjct: 130 IPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNR 189
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
++VE ++ EMK+ + D + N L + +ME + + W T
Sbjct: 190 EKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLD 249
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRD-RVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
MA Y++ KA + LR E + + + Y +L+ LYG G +EEV RVW LY+S
Sbjct: 250 MAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSK 309
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
N GY +I SL ++ DI G E+I++ W S+ +D RI ++ S Y G +KA
Sbjct: 310 IGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKA 369
Query: 407 EAFFNS 412
E NS
Sbjct: 370 EKLMNS 375
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 34/204 (16%)
Query: 98 EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVH 157
E+ G + +L ++K LR +++ AL+V +WM + + L D A +L L V
Sbjct: 392 EQWGDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEK-QVCNLYLEDYAARLYLTENVL 450
Query: 158 GVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
G+ AE +F ++P+ +KD VY ALL++Y ++ DK
Sbjct: 451 GLEEAEKYFENIPENMKDYSVYVALLSSYAKS--------------DKNLG--------- 487
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ V+ ++ EM+E + D+ + N L ++ + ME +
Sbjct: 488 ----------NMVDEILREMEENNVDPDLITVNHVLKVYAAESKIQAMEMFMRRWGTEDG 537
Query: 278 VNPNWTTFSTMATMYIKMGQVEKA 301
+ T MA Y+K G +K+
Sbjct: 538 IKLERGTMIAMAKAYVKAGLTKKS 561
>gi|226528511|ref|NP_001143788.1| uncharacterized protein LOC100276555 [Zea mays]
gi|195627038|gb|ACG35349.1| hypothetical protein [Zea mays]
Length = 422
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 174/335 (51%), Gaps = 19/335 (5%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ + L W GR EL R+ ++L + RRYKHALEV DWM E LS +D ++
Sbjct: 70 ATAALEKWSSEGRDAPAAELRRIARDLTRVRRYKHALEVADWMKTHHES-DLSENDYGMR 128
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+DLI KV G ++AEDFF LP K Y ALL++Y R++M AE L ++M+ +
Sbjct: 129 IDLITKVFGASAAEDFFEKLPAGAKSLEAYTALLHSYGRSKMTDRAERLFERMKGASLPM 188
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+L YN MMTLY+ + E +VE++ E+K + + D+++YN+ S+ + E V
Sbjct: 189 DALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYNLRASAAAASMDLEGFRAVL 248
Query: 270 ELMKVD--KAVNPNWTTFSTMATMYIKMGQVEKAEES--LRRVESRITGRDRVPYHYLLS 325
+ M D + W + +A++Y+ GQ+ + S + E+RI+ R+ + Y +L+
Sbjct: 249 DEMSRDLKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVEAGEARISQREWITYDFLVI 308
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPG----------VTNLGYHAMISSLARIGDIEGMEKIF 375
L+ +G+ E + +W RS+ +T+ Y ++SS G +E ++
Sbjct: 309 LHAGLGRPERIRDIW---RSMVATSQSQSQSQQRMTSRNYVCVVSSYLACGRLEDAGEVV 365
Query: 376 EEWLSVKS-SYDPRIANLMMSWYVKEGNFDKAEAF 409
++W K+ +D N ++ ++ G D A F
Sbjct: 366 DQWQRSKAPEFDVSACNRLLDALLRAGLADAAGRF 400
>gi|297806979|ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
gi|297317210|gb|EFH47632.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
Length = 410
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 165/301 (54%), Gaps = 3/301 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ + +VL W G +T EL + KELR+ RR+KHALEV +WM E ++S +D
Sbjct: 68 PKRSATTVLERWVGEGNQITINELREISKELRRTRRHKHALEVTEWMVQH-EELKVSDAD 126
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKM-RD 204
A ++DLI+KV G+ +AE +F L K Y +LL+AY ++ AE L ++
Sbjct: 127 YASRIDLISKVFGIDAAERYFEGLHIDAKTTETYTSLLHAYAGSKQTERAEALFKRIIET 186
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
+ ++ YN MMTLYM + + ++V ++ +K K + D+++YN+WLSSC + + ++
Sbjct: 187 DSLSFGAITYNEMMTLYMSVGQVEKVPEVIQVLKHKKVSPDIFTYNLWLSSCAATFNIDE 246
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE-SLRRVESRITGRDRVPYHYL 323
+ + E M+ D + N W + + ++YI +V AE S E I+ R+ + Y +L
Sbjct: 247 LRRILEEMRHDASSNEGWVRYINLTSIYINSSRVTNAESTSPVEAEKSISQREWITYDFL 306
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ L+ +G K + ++W + +++ Y ++SS +G + E+I +W K+
Sbjct: 307 MILHTGLGNKVMIDQIWKSLGNTNQKLSSRSYICVLSSYLMLGHLREAEEIIHQWKESKT 366
Query: 384 S 384
+
Sbjct: 367 T 367
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 180/347 (51%), Gaps = 7/347 (2%)
Query: 126 LEVYDWMN-NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
+E+ DWM +G ++ L+ D +++DL +K+ AE + P K Y LL
Sbjct: 1 MEISDWMALEKGTKWELA--DNIVRIDLKSKMKQFTVAEQLLENSPPEFKTELAYHTLLK 58
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
YV +M A L++K++ G +N MM LY + +++ ++ +MK G+
Sbjct: 59 NYVDHQMAQKAGALLEKLKSTGLLTLPFSFNQMMLLYKRKGMENKLPEILEDMKAHGVPK 118
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
DVY+YNI + G E ME +FE +K D+ V + TF T+AT + G +EKA+
Sbjct: 119 DVYTYNILMDVKSRSGDIEGMEKIFEELKADENVKADAATFGTLATACVHAGLLEKAKVY 178
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
L+ +E R+R Y L+S YG+VG + V RVW +S P V+N Y +I + +
Sbjct: 179 LKEMEEGDIFRNRSAYDILISQYGAVGDVDGVERVWEKVKS-GPIVSNRSYITVIEAFGK 237
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
+G +E E+++E K R N ++S Y ++G DKAE + + + G K N+ +
Sbjct: 238 LGMVEKAEELYEVMSQSKGLILSRQFNSLLSAYTRQGLMDKAEKLMDDMEKLGRKKNAIT 297
Query: 425 WETLAEGHIRERRILEALSCLKGAFA--AEG-AKSWRPKPVNVINFF 468
+ L G+++ ++ +A++ +K A +G +K W V V++ F
Sbjct: 298 YHHLVTGYLKTDQLDKAVAAMKEALVDPKQGRSKPWFETLVAVLDAF 344
>gi|297851240|ref|XP_002893501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339343|gb|EFH69760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 3/322 (0%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
VL W + G + + ++K+LR + AL+V +WM+ + + L D A +L L
Sbjct: 47 VLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMS-KEKICNLIPEDFAARLHL 105
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRA-RMRGNAELLIDKMRDKGYAVHS 211
I V G+ AE FF S+P +D VY LLN Y R+ + AE KMR+ G
Sbjct: 106 IENVVGLEEAEKFFESIPKNARDDSVYTTLLNWYARSDKTLCKAEATFQKMRELGLLSRP 165
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
PYN MM+LY+ + + ++VE ++ EMK+ + D + N L + ME
Sbjct: 166 SPYNAMMSLYIALNDREKVEELLREMKDNDVEADSITVNNVLKLYSAVCDVTAMEKFLNK 225
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD-RVPYHYLLSLYGSV 330
+ + W T MA Y++ KA + LR E + + Y +L+ LYG
Sbjct: 226 WEGINGIKLEWLTTLDMAKAYLRARSNGKAIKMLRLTEELADRKSLKSAYDHLMKLYGEA 285
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
G +EEV R+WNLY+ N GY +I SL ++ DI G E+I++ W S+ +D RI
Sbjct: 286 GNREEVLRIWNLYKMNIGQRDNKGYRTVIRSLLKVDDIFGAEEIYKVWESLSLEFDIRIP 345
Query: 391 NLMMSWYVKEGNFDKAEAFFNS 412
++ S Y + G +KAE NS
Sbjct: 346 TMLASGYRERGMTEKAEKLINS 367
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 98 EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGER--FRLSASDAAIQLDLIAK 155
E+ G + +L ++K LR ++ AL+V +WM GE+ L + D A +L L
Sbjct: 384 EQWGDQMKPSDLKCLIKNLRDSNQFSKALQVSEWM---GEKRVCDLYSEDYAARLYLTEN 440
Query: 156 VHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRA--RMRGNAELLIDKMRDKGYAVHSLP 213
V G+ AE +F ++P+ +KD VY ALL++Y ++ + E ++ +M + S+
Sbjct: 441 VLGLEKAEKYFENIPENMKDYSVYVALLSSYAKSDKNLENMVEEILREMEENNVDPDSIT 500
Query: 214 YNVMMTLY 221
N ++ +Y
Sbjct: 501 VNYVLKVY 508
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 38/153 (24%)
Query: 249 YNIWLSSCGSQGSTEK-----MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
Y+++++ S ++K +E + M+ + V+P+ T + + +Y +VE E
Sbjct: 461 YSVYVALLSSYAKSDKNLENMVEEILREME-ENNVDPDSITVNYVLKVYAAASKVEAMEM 519
Query: 304 SLRRVESRITGRDRVPYHYLLSLYGSV-GKKEEVYRVWNLYR-----------------S 345
+R H+ + +YG+V G K EV+ +W + S
Sbjct: 520 FMR--------------HWAVEMYGNVAGCKREVHNLWEECKNKKEEKVGDGKECLNVVS 565
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
+ + GY +ISSL ++ D++G EK++ EW
Sbjct: 566 TLLKMDDDGYRTVISSLLKLDDVQGAEKVYGEW 598
>gi|9955532|emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 163/301 (54%), Gaps = 10/301 (3%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ + +VL W G +T EL + KELR+ RRYKHALE E ++S +D
Sbjct: 67 PKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALE--------HEESKISDAD 118
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKM-RD 204
A ++DLI+KV G+ +AE +F L K Y +LL+AY ++ AE L ++
Sbjct: 119 YASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIES 178
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
++ YN MMTLYM + + ++V ++ +K+K + D+++YN+WLSSC + + ++
Sbjct: 179 DSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDE 238
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL-RRVESRITGRDRVPYHYL 323
+ + E M+ D + N W + + ++YI +V AE +L E I+ R+ + Y +L
Sbjct: 239 LRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFL 298
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ L+ +G K + ++W R+ +++ Y ++SS +G + E+I +W K+
Sbjct: 299 MILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKT 358
Query: 384 S 384
+
Sbjct: 359 T 359
>gi|148906608|gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 189/401 (47%), Gaps = 7/401 (1%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
S L W G LT+ E+ LR R +K L+V DW+ + + F+ + D A +LD
Sbjct: 148 SSLEQWLADGNVLTRREVVITFVHLRNRRMFKRLLKVSDWLEGK-KPFKKTERDYASRLD 206
Query: 152 LIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
+I K+ G+ E +F S+P ++ +R YG LL Y AE + KM+ +G+++ +
Sbjct: 207 VITKILGIFKGEKYFASIPSDMRGQRAYGTLLANYSSTCNVEKAEEIFKKMKAEGFSLTA 266
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
YN ++ LY ++ + +++ ++ M+++G++ +++Y I + G G ME V E
Sbjct: 267 FEYNQLLLLYKRL-DKKKIQDVLKMMEDEGVKPTIFTYKILIDVKGWMGDIGGMEQVAEN 325
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
MK + + + T +A YI+ G EKAE L+ +E+ R LL LY +G
Sbjct: 326 MKSED-IEMDSGTLELLARHYIRAGLAEKAEVVLKELENVSLKDKRSRLKMLLPLYAELG 384
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
K EV R+W + + FP + Y + + ++G IE E FE+ L+ + N
Sbjct: 385 KPTEVERIWKDFEA-FPALRLDEYATGVVAWGKLGQIEKAEITFEKLLNSGKKLSAKHYN 443
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
+++ Y K + + + G W+ L H+ + +A S L F A
Sbjct: 444 ALLNVYADHHLLLKGKELVKRMSDNGCTIEPPIWDALIRLHVNAGELEKADSIL---FKA 500
Query: 452 EGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
K RPK ++ + E D+ + E +RQ GY
Sbjct: 501 CNQKQLRPKYWTMVTILEKYAERGDVANAEKIFDRMRQAGY 541
>gi|297835552|ref|XP_002885658.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
gi|297331498|gb|EFH61917.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
Length = 737
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 179/346 (51%), Gaps = 15/346 (4%)
Query: 91 ASVLNDW---EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAA 147
+VL W ++ G+ L + VV+ LR +R + ALEV +WM + + L D
Sbjct: 39 TTVLEQWRQQQEQGKQLNPSLVRGVVENLRDSQRCREALEVSNWMIVQ-KICNLIPEDFT 97
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+ LI V G+ A +F S+P+ L++ +Y +LL++YVR AE KMR+ G
Sbjct: 98 TRFHLIENVFGLEEAGNFVESIPENLRNESIYNSLLSSYVRRNDLDKAESTFKKMRELGL 157
Query: 208 AVHSLPYNVMMTLYMKIKEYD--EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ + PYN M +LY +I + +V+ ++ EMKE I+LD + N L M
Sbjct: 158 LLRASPYNSMTSLYRRIPHGNRCKVDEILREMKESNIKLDRDTVNNALRVYADVTHIATM 217
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E L + + +W T MA Y++ G KA+E LRR E RD Y L+
Sbjct: 218 EKF--LAEWEGNTPLDWLTRLDMAKAYLRSGFKGKAKEMLRRTEEL---RDPKSYEELMR 272
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI-FEEWLSVKSS 384
LYG G +++VYRVW+LY+ + N G+ A+I SL ++ DI G E+ ++EW
Sbjct: 273 LYGEAGGRKDVYRVWDLYKKL-SKKDNEGFRALIGSLLKLDDINGAEEFYYKEWECSGLP 331
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSII--EEGGKPNSTSWETL 428
+D RI +++S Y ++G +KA+ I+ EE KP + E+L
Sbjct: 332 FDVRIPTMLVSSYREKGMVEKADKLIKEIMKNEESVKPITPLLESL 377
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 157/340 (46%), Gaps = 45/340 (13%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L E+ G + EL ++K L ++ ALE WM+ + F L D A +L +
Sbjct: 373 LLESLERKGNVVKPSELRDLIKNLCDSNQFYKALEASKWMSTKTS-FNLFPQDYAARLHM 431
Query: 153 IAKVHGVASAEDFF-LSLPDTLKDRRVYGALLNAYVRA-RMRGNAELLIDKMRDKGYAVH 210
I V G AE FF S+P+ +KD VYG LL+ Y ++ + AE + +KM D G+
Sbjct: 432 IENVLGFEEAEKFFERSIPENMKDDYVYGTLLSCYAKSHKTLDKAEAIFEKMGDLGFLSK 491
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV-F 269
P+N M++LY ++ + ++VE+++S+MK I D + N L + + M+
Sbjct: 492 PSPFNSMISLYSQLGKREKVENLISKMKCMNIEPDSLTMNNVLRMYADETDIKTMDKYKR 551
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
E + +K T MA Y + G + KA E R
Sbjct: 552 EWINAEKNTKLEMRTMVAMANAYERAGLLLKAIEITR----------------------- 588
Query: 330 VGKKEEVYRVWNLYRS---------------VFPGVTNLGYHAMISSLARIGDIEGMEKI 374
K EV+R+WN Y+ V + Y ++ISSL ++ D++G E+I
Sbjct: 589 --SKNEVHRLWNEYKEKEKRNYKIDDANLCKCRSAVGDEEYQSVISSLLKLDDLKGAEEI 646
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA-EAFFNSI 413
+ EW ++ RI L++S Y KEG+ K E ++SI
Sbjct: 647 YGEWEPEGPEFNTRIPCLIISRYCKEGDEVKVREVVYSSI 686
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 161/307 (52%), Gaps = 47/307 (15%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
+++ K+S + +P L++W + G + EL R++ +LRK +R+ ALE+ +WM+
Sbjct: 40 SLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSK 99
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN 194
+G S ++ A+QLDLI +V G SAE +F SL + K + YGALLN YVR R
Sbjct: 100 KG-ICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDK 158
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
+ + KM++ G+A L YN +M LY + ++++V +++EMK+ + D +SY I ++
Sbjct: 159 SLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICIN 218
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
S G+Q + ME V L+ +E +
Sbjct: 219 SYGAQSDIQGMENV------------------------------------LKEMERQPHI 242
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG---------YHAMISSLARI 365
RD + Y++L+SLY S+G K EV R+W+L ++V V +L YH +I + R
Sbjct: 243 RDGLGYNHLISLYASLGNKAEVLRLWSLEKNVEAFVGSLRIVIPMNRRMYHTLIMANIRA 302
Query: 366 G-DIEGM 371
G +++G+
Sbjct: 303 GKEVDGL 309
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
T+ + Y++ Q +K+ L++++ + Y+ ++ LY +VG+ E+V V
Sbjct: 142 TYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEM 201
Query: 344 R--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ +V+P N Y I+S DI+GME + +E D N ++S Y G
Sbjct: 202 KQSNVYP--DNFSYRICINSYGAQSDIQGMENVLKEMERQPHIRDGLGYNHLISLYASLG 259
Query: 402 NFDKAEAF 409
N KAE
Sbjct: 260 N--KAEVL 265
>gi|449457725|ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 227
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 127/198 (64%), Gaps = 1/198 (0%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
++R++S + +P + +L+ W GR + + EL ++KELR ++R+KHALE+ WM+++
Sbjct: 31 LYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDK 90
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
F LS +D AI+++LI +VHG+ ED+F ++P LK +V+ ALLN Y + A
Sbjct: 91 -RYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKA 149
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
+ K+++ G+A LPYN+MM LY +I E++ ++S++ EMKE+G+ D ++Y+I +S+
Sbjct: 150 NAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISA 209
Query: 256 CGSQGSTEKMEGVFELMK 273
+ +E + E M+
Sbjct: 210 YAAASDFRGIEKIMEQME 227
>gi|6958202|gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 209/427 (48%), Gaps = 9/427 (2%)
Query: 66 ERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHA 125
++ PM K + +++ P+ G + L W GG + + ++ V+ LRK + Y A
Sbjct: 136 DKEPMKKASQSPLLKVMLEAPRNGVSGTLKKWLDGGNTFDRSDIFYVIMNLRKRKFYFKA 195
Query: 126 LEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNA 185
L++ +W+ + + L D A +LDL+AKVHGV AE + S+P + + VY LL
Sbjct: 196 LQLLEWLED-SKVIDLGERDYASRLDLVAKVHGVYKAEKYIDSIPISHRGEIVYRTLLAN 254
Query: 186 YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD 245
V +E + +KM+D G+ V N ++ LY ++ + ++ ++++M+++ ++
Sbjct: 255 CVSEANVKKSEEVFNKMKDLGFPVTVFAINQLLLLYKRV-DKKKIADVLAKMEKENVKPS 313
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
+++Y + + + G+ ME V E M+ + V P+ +T+A YI G EKAE L
Sbjct: 314 LFTYKLLVDTKGAIRDIAGMEKVVESMQAE-GVEPDLLFQATIAKHYIFAGHREKAEAIL 372
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARI 365
+E +R LL LY +GKK++V R+W + + P + + I S R+
Sbjct: 373 ESMEGGDIKGNRNACKILLPLYAFLGKKDDVERMWQVCEA-NPRLDEC--LSAIESFGRL 429
Query: 366 GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
GD+E EK+FE+ + + + N +M Y + F K + + E+G + ++
Sbjct: 430 GDVERAEKVFEDMFATWKTLSSKFYNALMKVYADQNLFKKGKELAKRMDEDGCRLGISTI 489
Query: 426 ETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVA 485
++L + ++ + +A S L + +P+ + + ++ D+ + E
Sbjct: 490 DSLVKLYVGAGEVDKAESIL---HKLSKSNKMKPQYSSYLMLLDTYSKKGDIHNSEKVFD 546
Query: 486 LLRQPGY 492
LRQ GY
Sbjct: 547 QLRQMGY 553
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 19/221 (8%)
Query: 186 YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD 245
Y+ A R AE +++ M + +++ LY + + D+VE M ++ E RLD
Sbjct: 359 YIFAGHREKAEAILESMEGGDIKGNRNACKILLPLYAFLGKKDDVERMW-QVCEANPRLD 417
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST-----MATMYIKMGQVEK 300
I S G G E+ E VFE M W T S+ + +Y +K
Sbjct: 418 ECLSAI--ESFGRLGDVERAEKVFEDMFA------TWKTLSSKFYNALMKVYADQNLFKK 469
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+E +R++ L+ LY G V K E + + + P ++ Y
Sbjct: 470 GKELAKRMDEDGCRLGISTIDSLVKLYVGAGEVDKAESILHKLSKSNKMKPQYSS--YLM 527
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
++ + ++ GDI EK+F++ + + R L+++ YV
Sbjct: 528 LLDTYSKKGDIHNSEKVFDQLRQMGYNGRVRQYQLLLNAYV 568
>gi|115458674|ref|NP_001052937.1| Os04g0450200 [Oryza sativa Japonica Group]
gi|113564508|dbj|BAF14851.1| Os04g0450200, partial [Oryza sativa Japonica Group]
Length = 292
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 145/270 (53%), Gaps = 1/270 (0%)
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
LS +D +++DLI +V G +AEDFF LP ++ Y ALL++Y R++M AE L
Sbjct: 4 LSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFK 63
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M+D +++ L YN MMTLY+ + E D+V + E+K + D+++YN+ +S+ +
Sbjct: 64 RMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASM 123
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
E +G+ + M D N W + +A +Y+ GQ+ + SL E++I+ R+ + Y
Sbjct: 124 DLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITY 183
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
+L+ L+ +G ++ + +W +T+ Y ++SS G ++ ++ ++W
Sbjct: 184 DFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQR 243
Query: 381 VKS-SYDPRIANLMMSWYVKEGNFDKAEAF 409
K+ +D N + ++ G D A +F
Sbjct: 244 SKAPEFDISACNRLFDAFLNAGFTDTANSF 273
>gi|302782563|ref|XP_002973055.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
gi|300159656|gb|EFJ26276.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
Length = 547
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 183/359 (50%), Gaps = 13/359 (3%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
++ +W G +T++ L V +LR+ +R+ HAL + DW+ + +A +DL
Sbjct: 78 IVEEWMAEGNEITRYGLIIVRHKLRRRKRFHHALRISDWIAYKKRVIPYDHKEALNHIDL 137
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
+++V V A + F +LP K R Y LL+ YVR M +AE + ++ G S
Sbjct: 138 VSRV-SVTRAREMFDNLPADWKSREAYTVLLSMYVRHSMAADAESIYTTLKRWGLRSIS- 195
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
P N+M+TLY K + + +V ++ + +E G L++ S+NI L G +ME + E+M
Sbjct: 196 PINMMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESLVEMM 255
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI-TG---RDRVPYHYLLSLYG 328
+ ++ + T+ +A+ Y + G V+KA+E L VE + TG R R Y+ ++ +YG
Sbjct: 256 ESKNFLDEH--TYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIVIYG 313
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
+G E V R+W++ + P T Y MI S A++G E E F L+ +
Sbjct: 314 FIGDVEGVKRIWDITSRMDP--TAEDYICMIRSSAKVGLFELAESGFLA-LAAQRKMHIT 370
Query: 389 IANLMMSWYVKEGNFD-KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ N+M+ + GNF +AE+ I + G KP+ ++ L H++ I AL +
Sbjct: 371 VCNVMLQ-VCQAGNFVLRAESLLRKIHQMGFKPDPATYHHLIAIHLKNDNIQRALDLFQ 428
>gi|302788498|ref|XP_002976018.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
gi|300156294|gb|EFJ22923.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
Length = 603
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 165/315 (52%), Gaps = 10/315 (3%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGE--RFRLSASDAAI 148
+SVL+ W++ G+ LT + V+ L+ R HALE+ +W+ + + F+L+ S
Sbjct: 166 SSVLDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEWVVDEPDYKDFKLARS---F 222
Query: 149 QLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
QL++ A+ G+A+AE F L K R VY ALL YV AE L ++M G+
Sbjct: 223 QLEITARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGFL 282
Query: 209 VHS-LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
S N+MM LY + + + M+ + K+ + ++++YN+ L G E ME
Sbjct: 283 SQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGMEK 342
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+FE MK++ P+ T++ T+ Y+K G +KAE SL R+E R + + Y++ Y
Sbjct: 343 IFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRMEVGPFRRTKATFEYMMLAY 402
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF---EEWLSVKSS 384
G +G +V R+W + V PG + A ++A G+++ ++ +F ++W K+
Sbjct: 403 GQLGLISDVERMWQKCKMV-PGDGFNSFLAFQRAMALAGEVQRVDSMFKHMDKWKRSKTV 461
Query: 385 YDPRIANLMMSWYVK 399
R NL++++Y K
Sbjct: 462 DLKRHNNLLLAYYKK 476
>gi|226530081|ref|NP_001147602.1| DNA-binding protein [Zea mays]
gi|195612448|gb|ACG28054.1| DNA-binding protein [Zea mays]
Length = 622
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 195/412 (47%), Gaps = 9/412 (2%)
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
++++ P+ S L W K G + + EL V+ LRK Y ALE+ +W+ + + F
Sbjct: 160 TVLEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQ-KSQLFE 218
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
D A LDL AKV+G+ AE +P + + VY LL V A +E + +
Sbjct: 219 FVERDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFN 278
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M+D G+ V +N ++ LY ++ + ++ +++ M+++ ++ +++Y I + + GS G
Sbjct: 279 RMKDLGFPVTQFSFNQLLLLYKRL-DRKKIADVLAMMEKEDVKPSLFTYKILVDAKGSVG 337
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
E ME V E M+ D ++ P+ T +T+A YI GQ EKAE L+ +E ++R
Sbjct: 338 DIEAMEKVIESMEKD-SIEPDLTFNATIARHYIFYGQREKAEALLKAMEGDDIQKNRAAC 396
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
LL L+ +G + V R+W ++ + I + ++GD+E EK+FE+ L
Sbjct: 397 KTLLPLHAFLGNSDAVERIWKACEDNTRVAESV---SAIEAFGKLGDVEKAEKVFEDMLV 453
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ + N ++ Y DK + + E + + + + L + ++ + +
Sbjct: 454 HWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALVKLYVEAGEVEK 513
Query: 441 ALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
A S + K P + + ++ D+ + E LRQ GY
Sbjct: 514 AESLVHKLSIQNHIK---PIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGY 562
>gi|302805546|ref|XP_002984524.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
gi|300147912|gb|EFJ14574.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
Length = 547
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 183/359 (50%), Gaps = 13/359 (3%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
++ +W G +T++ L V +LR+ +R+ HAL + DW+ + +A +DL
Sbjct: 78 IVEEWMAEGNEITRYGLIIVRHKLRRRKRFHHALRISDWIAYKKRVIPYDHKEALNHIDL 137
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
+++V V A + F +LP K R Y LL+ YVR M +AE + ++ G S
Sbjct: 138 VSRV-SVTRAREMFDNLPADWKSREGYTVLLSMYVRHSMAADAESIYTTLKRWGLRSIS- 195
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
P N+M+TLY K + + +V ++ + +E G L++ S+NI L G +ME + E+M
Sbjct: 196 PINMMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESLVEMM 255
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI-TG---RDRVPYHYLLSLYG 328
+ ++ + T+ +A+ Y + G V+KA+E L VE + TG R R Y+ ++ +YG
Sbjct: 256 ESKNFLDEH--TYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIVIYG 313
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
+G E V R+W++ + P T Y MI S A++G E E F L+ +
Sbjct: 314 FIGDVEGVKRIWDITSRMDP--TAEDYICMIRSSAKVGLFEQAESGFLA-LAAQRKMHIT 370
Query: 389 IANLMMSWYVKEGNFD-KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ N+M+ + GNF +AE+ I + G KP+ ++ L H++ I AL +
Sbjct: 371 VCNVMLQ-VCQAGNFVLRAESLLRKIHQMGFKPDPATYHHLIAIHLKNDNIQRALDLFQ 428
>gi|413946863|gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 195/412 (47%), Gaps = 9/412 (2%)
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
++++ P+ S L W K G + + EL V+ LRK Y ALE+ +W+ + + F
Sbjct: 160 TVLEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQ-KSQLFE 218
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
D A LDL AKV+G+ AE +P + + VY LL V A +E + +
Sbjct: 219 FVERDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFN 278
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M+D G+ V +N ++ LY ++ + ++ +++ M+++ ++ +++Y I + + GS G
Sbjct: 279 RMKDLGFPVTQFSFNQLLLLYKRL-DRKKIADVLAMMEKEDVKPSLFTYKILVDAKGSVG 337
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
E ME V E M+ D ++ P+ T +T+A YI GQ EKAE L+ +E ++R
Sbjct: 338 DIEAMEKVIESMEKD-SIEPDLTFNATIARHYIFYGQREKAEALLKAMEGDDIQKNRAAC 396
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
LL L+ +G + V R+W ++ + I + ++GD+E EK+FE+ L
Sbjct: 397 KTLLPLHAFLGNSDAVERIWKACEDNTRVAESV---SAIEAFGKLGDVEKAEKVFEDMLV 453
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ + N ++ Y DK + + E + + + + L + ++ + +
Sbjct: 454 HWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALVKLYVEAGEVEK 513
Query: 441 ALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
A S + K P + + ++ D+ + E LRQ GY
Sbjct: 514 AESLVHKLSIQNHIK---PIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGY 562
>gi|414877074|tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 198/416 (47%), Gaps = 17/416 (4%)
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
++++ P+ S L W K G +L + EL V+ LRK + Y ALE+ +++ N +
Sbjct: 151 TVLEAPRHQVTSALEKWAKDGNALDRGELYYVLLNLRKRKWYHKALELVEYVQN-SQLLE 209
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
L D A ++DL AKV+G+ AE + +P + + VY LL V +E + +
Sbjct: 210 LGERDYAARVDLTAKVYGLHKAEQYIEKIPASHRSEVVYRTLLANCVAEGNVKKSEQVFN 269
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M+D G+ V + N ++ LY ++ + ++ +++ M+++ ++ +++Y + + + G G
Sbjct: 270 RMKDLGFPVTTFSSNQLLLLYKRL-DKKKIADVLTMMEKEDVKPSIFTYKVLVDAKGMVG 328
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
E ME V E M V + P+ T +T+A YI GQ +KAE L +E ++R
Sbjct: 329 DVEAMEKVVESM-VKDGIEPDLTFNATIARQYIFNGQRDKAETLLESMEGDDIQKNRAAC 387
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE--- 377
+LL LY +G + V R+W + L + I + ++G++E EK+FE+
Sbjct: 388 KFLLPLYAFLGNGDAVERIWKVCEDNTRIDECL---SAIDAFGKLGNVEKAEKVFEDMFV 444
Query: 378 -WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
W ++ S Y ++ Y + DK E + EEG K + + L + +
Sbjct: 445 KWKNLSSKY----YTALLKVYANQNLLDKGEELAKRMDEEGAKFGTPTLNALVKLYADAG 500
Query: 437 RILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+ +A S L K P + + + ++ D+ + E LRQ GY
Sbjct: 501 EVEKAESLLHKLSLKNNVK---PSYSSYMTLLDSYSKKGDVHNSEKVFNKLRQIGY 553
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AE + + M K + S Y ++ +Y D+ E + M E+G + + N +
Sbjct: 435 AEKVFEDMFVKWKNLSSKYYTALLKVYANQNLLDKGEELAKRMDEEGAKFGTPTLNALVK 494
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV-ESRIT 313
G EK E + + + V P+++++ T+ Y K G V +E+ ++ + T
Sbjct: 495 LYADAGEVEKAESLLHKLSLKNNVKPSYSSYMTLLDSYSKKGDVHNSEKVFNKLRQIGYT 554
Query: 314 GRDRVPYHYLLSLY 327
GR R+ Y +LL Y
Sbjct: 555 GRIRM-YQFLLHSY 567
>gi|296090465|emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 123/208 (59%), Gaps = 1/208 (0%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P+ +VL W G + EL + KELR+ +RYKHALE+ +WM + E F LS SD
Sbjct: 63 PKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSHDE-FELSDSD 121
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A+++DL+ +V G+ +AE +F LP K Y ALL++Y A++ AE L +++++
Sbjct: 122 NAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKES 181
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
++ L YN MMTLYM + + ++V +V E+K + + D+++YN+W+SSC + + +
Sbjct: 182 NVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGV 241
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ + M + + N W + +A +YI
Sbjct: 242 RRILKEMSNNSSANDGWVRYRNLANIYI 269
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
T++ + Y EKAEE R++ + + Y+ +++LY SVG+ E+V V
Sbjct: 154 TYTALLHSYAGAKLAEKAEELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEEL 213
Query: 344 R--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
+ V P + Y+ +SS A DI+G+ +I +E + S+ D
Sbjct: 214 KRQKVVPDL--FTYNLWVSSCAATLDIDGVRRILKEMSNNSSAND 256
>gi|449506017|ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 608
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 193/388 (49%), Gaps = 12/388 (3%)
Query: 68 RPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALE 127
RP +NAI+ K S++ P S L+ W G+ L++ E+ + LRK R + AL+
Sbjct: 140 RPSELFNAIW-KASVLSVP-----SALDKWVSEGKDLSRAEISLAMLHLRKRRMFGKALQ 193
Query: 128 VYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYV 187
+W+ G+ + D A +LDLIAKV G+ AE + +P + + ++ LL YV
Sbjct: 194 FSEWLEANGQ-LEFNQRDYASRLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYV 252
Query: 188 RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY 247
A AE + +KM+D + + ++ M+ LY +I + ++ ++S M+++ ++ +
Sbjct: 253 AANNVKKAEEVFNKMKDLEFPMTPFAHDQMLILYKRIDKR-KLADILSLMEKENVKPSPF 311
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
+Y I + + G ME V + MK + + P+ +T S +A Y+ G +KA+ L+
Sbjct: 312 TYKILIDAKGLCNDISGMEQVVDSMKAE-GIKPDVSTLSLLAKHYVSNGLKDKAKVILKD 370
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD 367
+E + R+P LL LYG++ ++EV R+W + + P + A I + ++ +
Sbjct: 371 MEENNSKGSRLPCRILLPLYGALQMEDEVRRLWKICEAN-PHMEE--SMAAIVAWGKLKN 427
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
++ EKIF+ ++ R N MM+ Y K + N + E G + + +W+
Sbjct: 428 VQEAEKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDELTWDA 487
Query: 428 LAEGHIRERRILEALSCLKGAFAAEGAK 455
+ + ++ + +A S L A G K
Sbjct: 488 VVKLYVEAGEVEKADSFLVKAVQKYGMK 515
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN MM +Y K + + +V++M E G R+D +++ + G EK + F +
Sbjct: 450 YNTMMNVYGGSKMLTKGKELVNQMAESGCRMDELTWDAVVKLYVEAGEVEKADS-FLVKA 508
Query: 274 VDK-AVNPNWTTFSTMATMYIKMGQVEKAEE 303
V K + P +T++ T+ Y + G V AE+
Sbjct: 509 VQKYGMKPLFTSYKTLMDHYARRGDVHNAEK 539
>gi|297842839|ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
gi|297335142|gb|EFH65560.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 186/368 (50%), Gaps = 6/368 (1%)
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
+++ P L S L+ W + G +T+ E+ + + +LR+ R Y AL++ +W+ ++
Sbjct: 136 TIVSAPGLSIGSALDKWVEEGNEITRVEVAKAMLQLRRRRMYGRALQLSEWLEA-NKKIE 194
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
++ D + +LDL K+ G+ + E + +P + K +Y LL V A +EL+ +
Sbjct: 195 MNERDYSSRLDLTVKIRGLENGEAYMQKIPKSFKGEVIYRTLLANCVAAGNVKKSELVFN 254
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M+D G+ + + M+ LY +I + ++ ++ M+++ ++ + +Y I + G+
Sbjct: 255 RMKDLGFPLSGFTCDQMLLLYKRI-DRKKIADVLLLMEKENVKPSLLTYKILIDVKGATN 313
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
ME + E MK D+ V P++ T + A Y G EKAE+ L+ +E +R +
Sbjct: 314 DISGMEQILETMK-DEGVQPDFQTQALTAKHYSGAGLKEKAEKVLKEMEGESLEANRRAF 372
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
LLS+Y S+G+++EV R+W + S +L A I + ++ ++ E IFE+ ++
Sbjct: 373 KDLLSIYASLGREDEVTRIWKICESKPYFDESL---AAIHAFGKLNKVQEAEAIFEKIVT 429
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ ++++ YV K + + E G + +T+W+ L + ++ + +
Sbjct: 430 MGRRASSNTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEK 489
Query: 441 ALSCLKGA 448
A S L A
Sbjct: 490 ADSMLDKA 497
>gi|297800434|ref|XP_002868101.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
gi|297313937|gb|EFH44360.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 30/318 (9%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L W+K G + +L +K LR ++ ALE +WM + + F + D + +L L
Sbjct: 54 MLASWQKQGHQVKPSDLRGFIKNLRGSNQFSKALEASEWMGEQ-KVFDIVPEDYSARLHL 112
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR-MRGNAELLIDKMRDKGYAVHS 211
+ V G+ AE FF S+P + D VY LL++Y ++ AE +KMR+ G+ +
Sbjct: 113 VENVLGLEEAEKFFKSIPKNMTDYFVYATLLSSYTKSENTLDKAEATFEKMRELGFLLKP 172
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
P+N M++LY ++++ D VE +V EM+E + D + N L + ME F+
Sbjct: 173 SPFNSMISLYGQLQKLDMVEKLVREMQETKVECDSPTVNNVLRVYADTCKIKAME-TFKT 231
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV- 330
++ + T MA Y++ G +EKA E +YG+V
Sbjct: 232 WVDEQGIKLEGGTIVAMAKAYLRSGSIEKAIE----------------------MYGNVA 269
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
G ++EVYR+W+ Y+ V + GY ++SSL ++ +++G EKI+EEW D I
Sbjct: 270 GSEKEVYRLWDEYKKE-TKVNDNGYRTVLSSLLKLDNVQGAEKIYEEWKPEGPKLDMSIP 328
Query: 391 NLMMSWYVKEG---NFDK 405
+L++S Y EG N D+
Sbjct: 329 SLLLSRYYAEGMEINIDQ 346
>gi|357447811|ref|XP_003594181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483229|gb|AES64432.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 265
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 111/215 (51%), Gaps = 35/215 (16%)
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
FE + + NW+TFSTMA MYIKM EKA E L++VE RI
Sbjct: 80 FEQKSKNPTIISNWSTFSTMAAMYIKMELYEKAHECLKKVEGRIL--------------- 124
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
+ + + Y VWN Y+S+FP + NLGYHA++SSL R+ D+EG + L R
Sbjct: 125 VLETRTKFYHVWNNYKSMFPSIPNLGYHAVMSSLVRMNDMEGETFSYVGVL--------R 176
Query: 389 IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGA 448
ANL+ FF + E G PNST+WE L+EGHI ERR+ E LS L+
Sbjct: 177 KANLI------------KLNFFEHMTEGGECPNSTTWELLSEGHISERRVYEVLSFLEKG 224
Query: 449 FAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAF 483
F +K+W+ KP+ + F K C G ++ F
Sbjct: 225 FMTRDSKNWKAKPIKLAAFLKLCGRRRRHGERQGF 259
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 13/128 (10%)
Query: 127 EVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAY 186
+VYDWMNNR ERF++SASDA IQLDLIA+VHGV+SAE FFL+L + LKD
Sbjct: 20 QVYDWMNNRPERFKISASDAVIQLDLIARVHGVSSAEGFFLNLTNDLKD----------- 68
Query: 187 VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV 246
R R + K ++ + ++ M +Y+K++ Y++ + +++ + + L+
Sbjct: 69 TRGRRVEDGTSFEQKSKNPTIISNWSTFSTMAAMYIKMELYEKAHECLKKVEGRILVLET 128
Query: 247 YS--YNIW 252
+ Y++W
Sbjct: 129 RTKFYHVW 136
>gi|125525413|gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 203/424 (47%), Gaps = 10/424 (2%)
Query: 69 PMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEV 128
P+ K + K +L+ +P++ A W G +L + EL V+ LRK + Y AL++
Sbjct: 138 PIKKSQSTLLK-ALLVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQL 196
Query: 129 YDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVR 188
+++ + F L D A ++DL+AKVHG+ AE + ++P + + VY LL V
Sbjct: 197 LEYVE-ESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVA 255
Query: 189 ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYS 248
E + +KM+D G+ V N ++ LY ++ + ++ +++ M+++ ++ +++
Sbjct: 256 IANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRV-DKKKLGDVLTMMEKENVKPSLFT 314
Query: 249 YNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
Y + + + G+ E ME V + M+ D + P+ +T+A YI G EKAE L ++
Sbjct: 315 YKLLVDTKGATRDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAEAILEQI 373
Query: 309 ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDI 368
E +R ++L LY +GKK +V R+W + V + + I + ++GD+
Sbjct: 374 EGDDINENRSACKFVLPLYAFLGKKADVERIWKVCE-VNARLDEC--MSAIEAFGKLGDV 430
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
E E+IFE + N M+ Y + FDK + + ++G + ++ ++L
Sbjct: 431 EKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSL 490
Query: 429 AEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
+ + + +A S L +P + + ++ D+ + E + +R
Sbjct: 491 VKLYSDAGEVEKADSIL---HKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVR 547
Query: 489 QPGY 492
Q GY
Sbjct: 548 QMGY 551
>gi|56783681|dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 203/424 (47%), Gaps = 10/424 (2%)
Query: 69 PMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEV 128
P+ K + K +L+ +P++ A W G +L + EL V+ LRK + Y AL++
Sbjct: 138 PIKKSQSTLLK-ALLVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQL 196
Query: 129 YDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVR 188
+++ + F L D A ++DL+AKVHG+ AE + ++P + + VY LL V
Sbjct: 197 LEYVE-ESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVA 255
Query: 189 ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYS 248
E + +KM+D G+ V N ++ LY ++ + ++ +++ M+++ ++ +++
Sbjct: 256 IANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRV-DKKKLGDVLTMMEKENVKPSLFT 314
Query: 249 YNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
Y + + + G+ E ME V + M+ D + P+ +T+A YI G EKAE L ++
Sbjct: 315 YKLLVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAEAILEQI 373
Query: 309 ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDI 368
E +R ++L LY +GKK +V R+W + V + + I + ++GD+
Sbjct: 374 EGDDINENRSACKFVLPLYAFLGKKADVERIWKVCE-VNARLDEC--MSAIEAFGKLGDV 430
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
E E+IFE + N M+ Y + FDK + + ++G + ++ ++L
Sbjct: 431 EKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSL 490
Query: 429 AEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
+ + + +A S L +P + + ++ D+ + E + +R
Sbjct: 491 VKLYSDAGEVEKADSIL---HKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVR 547
Query: 489 QPGY 492
Q GY
Sbjct: 548 QMGY 551
>gi|11138066|dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 203/424 (47%), Gaps = 10/424 (2%)
Query: 69 PMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEV 128
P+ K + K +L+ +P++ A W G +L + EL V+ LRK + Y AL++
Sbjct: 118 PIKKSQSTLLK-ALLVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQL 176
Query: 129 YDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVR 188
+++ + F L D A ++DL+AKVHG+ AE + ++P + + VY LL V
Sbjct: 177 LEYVE-ESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVA 235
Query: 189 ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYS 248
E + +KM+D G+ V N ++ LY ++ + ++ +++ M+++ ++ +++
Sbjct: 236 IANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRV-DKKKLGDVLTMMEKENVKPSLFT 294
Query: 249 YNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
Y + + + G+ E ME V + M+ D + P+ +T+A YI G EKAE L ++
Sbjct: 295 YKLLVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAEAILEQI 353
Query: 309 ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDI 368
E +R ++L LY +GKK +V R+W + V + + I + ++GD+
Sbjct: 354 EGDDINENRSACKFVLPLYAFLGKKADVERIWKVC-EVNARLDEC--MSAIEAFGKLGDV 410
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
E E+IFE + N M+ Y + FDK + + ++G + ++ ++L
Sbjct: 411 EKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSL 470
Query: 429 AEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
+ + + +A S L +P + + ++ D+ + E + +R
Sbjct: 471 VKLYSDAGEVEKADSIL---HKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVR 527
Query: 489 QPGY 492
Q GY
Sbjct: 528 QMGY 531
>gi|297829684|ref|XP_002882724.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328564|gb|EFH58983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 518
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 166/328 (50%), Gaps = 42/328 (12%)
Query: 91 ASVLNDWEK----GGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
+VL +W + G L + +V++L +RY+ ALEV +WM + L D
Sbjct: 56 TTVLEEWRQQQKHGNHQLNPSLVKGIVEKLHDSKRYRQALEVSNWMIEKKICNHL-PEDL 114
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRA---RMRGNAELLIDKMR 203
A++ LI V G+ AE FF S+P+ LK +Y +LL +Y ++ +R AE +KMR
Sbjct: 115 AVRFHLIENVLGLEEAEKFFQSIPENLKGESIYTSLLKSYAKSGEISLR-KAEYTFEKMR 173
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
G + PYN M++LY ++ ++V+ ++ EMKE + LD + N L +
Sbjct: 174 KLGMLLRPSPYNSMVSLYSSLRNRNKVDEILREMKENNLELDSPTVNNALRVYAA----- 228
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
V ++ +DK + +W +T+ ++ ++ KA + L
Sbjct: 229 ----VCDVATMDKFL-ADWNAITTLE--WLTTLEMAKA-------------------YRL 262
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI-FEEWLSVK 382
+ LYG G++E+VYR+W+LY++ N G+ A+I SL ++ DI G EKI ++EW S
Sbjct: 263 IRLYGEAGEREDVYRIWDLYKNT-KEKDNEGFRALIGSLLKLDDINGAEKIYYDEWESSG 321
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+D RI ++MS Y +G KA+
Sbjct: 322 LEFDLRIPTMLMSGYRAKGMVKKADKLL 349
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Query: 108 ELCRVVKELRKFRRYKHALEVYDWM-NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF 166
+L ++K LR + ALE WM RG F L D AI+ LI KV G+ AE FF
Sbjct: 380 DLRDLIKNLRDSNQLSKALEASTWMCEKRG--FNLFPEDYAIRFHLIEKVLGLEEAEKFF 437
Query: 167 -LSLPDTLKDRRVYGALLNAYVRA-RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
S+P +KD VY LL +Y R+ + AE + +KMR+ G+ P+N +++LY++
Sbjct: 438 ESSIPKNMKDYSVYDTLLTSYTRSDKTLVKAEGVFEKMRELGFLSKLSPFNSIISLYIEQ 497
Query: 225 KEYDEVESMVSEMKEKGI 242
++ +V ++ +MK+ I
Sbjct: 498 RKLSKVNKLLCDMKQNNI 515
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 127/211 (60%), Gaps = 3/211 (1%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
+ +FR++ +P+ VL+ W + GR + + +L +++K+LR F R+ HAL++ +W
Sbjct: 36 DTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFNHALQLCEW-- 93
Query: 134 NRGERFRL-SASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
R ER + S AIQL LI+K G+ AE++F S+ ++ +D +VYGALL+ YV +
Sbjct: 94 ERNERNKCPSPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYVENKNL 153
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
AE ++ KMR+ G+ L YN M+ LY ++ ++++++ +V EM+E GI + ++YN+
Sbjct: 154 KKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVR 213
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
+++ + ME + M+ D V +W+
Sbjct: 214 MNAYAAASDITNMEKLLSKMEADPLVATDWS 244
>gi|357131430|ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 199/412 (48%), Gaps = 12/412 (2%)
Query: 82 LMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRL 141
+++ P + L W G ++ + ++ V LR+ R + AL++ +W+ + L
Sbjct: 152 MLEAPWNDVSGTLKKWVNDGNTVDRSDVFFAVLNLRRRRFFSKALQLLEWLE-ESKLIEL 210
Query: 142 SASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK 201
D A +LDL+AKVHG+ AE F ++P +L+ VY LL V AE + +K
Sbjct: 211 VERDYASRLDLMAKVHGIYKAEKFIDNIPASLRGEIVYRTLLANCVAEVNVKKAEEVFNK 270
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
M+D G+ V N ++ LY ++ + ++ +++ M+++ ++ +++Y + + + G+
Sbjct: 271 MKDLGFPVTVFAINQLLLLYKRV-DKKKISDVLTMMEKEDVKPSLFTYKLLVDTKGASRD 329
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
E ME V + M+ + + P+ +T+A YI G EKAE L +E + +R
Sbjct: 330 IEGMEKVVQSMEAE-GITPDLLLQATIAKHYIFGGHREKAEAILESMEGDMK-ENRNACK 387
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG-YHAMISSLARIGDIEGMEKIFEEWLS 380
++ LY +GKK++V R+W + +S T L + I + R+GD+E E++F
Sbjct: 388 MVMPLYAFLGKKDDVERIWKVCQS----NTRLDECLSAIEAFGRLGDVEKAEEVFGNMFK 443
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ + N MM Y + DK + + E+G + ++ ++L + ++ + +
Sbjct: 444 TWKTLSSKYYNAMMRVYANQNLMDKGKELAKRMEEDGCRLGISTLDSLVKLYVDAGEVEK 503
Query: 441 ALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
A S L K P+ + + + + D+ + E + LRQ GY
Sbjct: 504 AESLLHKLSVKNKMK---PQYSSYLMLLDSYSKIGDVHNSEKVFSKLRQMGY 552
>gi|302764000|ref|XP_002965421.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
gi|300166235|gb|EFJ32841.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
Length = 584
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 154/313 (49%), Gaps = 25/313 (7%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
+SVL+ W++ G+ LT + V+ L+ R HALE+ +W+ R +
Sbjct: 166 SSVLDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEWITARSK------------- 212
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
G+A+AE F L K R VY ALL YV AE L ++M G+
Sbjct: 213 -------GIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGFLSQ 265
Query: 211 S-LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
S N+MM LY + + + M+ + K+ + ++++YN+ L G E ME +F
Sbjct: 266 SPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGMEKIF 325
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
E MK++ P+ T++ T+ Y+K G +KAE SL R+E R + + Y++ YG
Sbjct: 326 EEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRMEVGPFRRTKATFEYMMLAYGQ 385
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF---EEWLSVKSSYD 386
+G +V R+W + V PG + A ++A G+++ ++ +F ++W K+
Sbjct: 386 LGLISDVERMWQKCKMV-PGDGFNSFLAFQRAMALAGEVQRVDSMFKHMDKWKRSKTVDL 444
Query: 387 PRIANLMMSWYVK 399
R NL++++Y K
Sbjct: 445 KRHNNLLLAYYKK 457
>gi|297844450|ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 212/437 (48%), Gaps = 16/437 (3%)
Query: 67 RRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHAL 126
+RP + +F+ + + +GSA L+ W + G+ ++ E + +LRK R Y AL
Sbjct: 125 KRP----SELFKAIVSVSGLSVGSA--LDKWVEQGKDTSRTEFASAMLQLRKRRMYGRAL 178
Query: 127 EVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAY 186
++ +W+++ ++F + D A +LDLI+KV G+ E + ++P++ + VY LL+ Y
Sbjct: 179 QMTEWLDD-NKQFEMKERDYASRLDLISKVRGLYKGEAYIETIPESFRGELVYRTLLSNY 237
Query: 187 VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV 246
V AE + +KM+D G+ + + N M+ LY ++ + ++ ++ M+++ ++ ++
Sbjct: 238 VATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRV-DKKKIADVLLLMEKENLKPNL 296
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
+Y I + + G ME + E MK + V P+ + +A Y G EKAE+ L+
Sbjct: 297 NTYKILIDTKGLSNDITGMEQIVETMK-SEGVEPDLRARALIARNYASAGLKEKAEKVLK 355
Query: 307 RVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIG 366
+E +R Y LLS+YG + + +EV R+W + +L A I + +I
Sbjct: 356 EMEGESLEENRHVYKDLLSVYGFLQRADEVTRIWKICEEKPRYNESL---AAILAFGKID 412
Query: 367 DIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWE 426
++ E +FE+ L + + ++++ YV + + +++ G + + +
Sbjct: 413 KVKEAEAVFEKMLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMLDSGCNIGALTLD 472
Query: 427 TLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVAL 486
+ + ++ + +A S L A +K +P + + D+ + E
Sbjct: 473 AVIKLYLEAGEVEKAESSLSKAIQ---SKQIKPLMSSFMYVMGEYVRRGDVHNTEKIFQR 529
Query: 487 LRQPGYRKE-KDYMSLI 502
++Q GY+ + Y +LI
Sbjct: 530 MKQFGYQSRFRTYQALI 546
>gi|15220095|ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis thaliana]
gi|20259918|gb|AAM13306.1| unknown protein [Arabidopsis thaliana]
gi|332198258|gb|AEE36379.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198259|gb|AEE36380.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 187/377 (49%), Gaps = 8/377 (2%)
Query: 72 KWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDW 131
K + +F+ +++ P L S L+ W + G +T+ E+ + + +LR+ R Y AL++ +W
Sbjct: 128 KQSELFK--TIVSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEW 185
Query: 132 MNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARM 191
+ ++ ++ D A +LDL K+ G+ E +P + K +Y LL V A
Sbjct: 186 LEA-NKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGN 244
Query: 192 RGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
+EL+ +KM+D G+ + + M+ L+ +I + ++ ++ M+++ I+ + +Y I
Sbjct: 245 VKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRI-DRKKIADVLLLMEKENIKPSLLTYKI 303
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ G+ ME + E MK D+ V ++ T + A Y G +KAE+ L+ +E
Sbjct: 304 LIDVKGATNDISGMEQILETMK-DEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGE 362
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
+R + LLS+Y S+G+++EV R+W + S +L A I + ++ ++
Sbjct: 363 SLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESL---AAIQAFGKLNKVQEA 419
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
E IFE+ + + ++++ YV K + + E G + +T+W+ L +
Sbjct: 420 EAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKL 479
Query: 432 HIRERRILEALSCLKGA 448
++ + +A S L A
Sbjct: 480 YVEAGEVEKADSLLDKA 496
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 178/397 (44%), Gaps = 12/397 (3%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
S W + G + ++ + LRK K AL+V +W+ R +R D + +
Sbjct: 55 GSAFRSWMRDGLPVHGGDIFHAINRLRKLNMNKRALQVMEWVI-RERPYRPRELDYSYLV 113
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ K+HG++ E F +P + +Y L+ A + + + + KMR+ G+ +
Sbjct: 114 EFTTKLHGISHGEKLFSRIPVEFQSELLYNNLVIACLDKGVIKLSLEYMKKMRELGFPIS 173
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
L +N ++ L+ + ++++MK + V +YNI + ++ + E + VF
Sbjct: 174 HLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLVKVFG 233
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
MKV + V PN ++ +A + E + VE ITG + LL LYG +
Sbjct: 234 RMKVAQ-VEPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVLLMLYGYL 292
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
G ++E+ RVW + + P + + Y I + RIG + E+I+ E S K
Sbjct: 293 GNQKELERVWATIQEL-PSIRSKSYMLAIEAFGRIGQLNRAEEIWLEMKSTKGLKSVEQF 351
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
N MMS Y K G D+A + ++ G KPN+ ++ LA G ++ +AL L
Sbjct: 352 NSMMSVYCKHGFIDRAAKLYKNMKASGCKPNAITYHQLALGCLKSGMAEQALKTLDLGLR 411
Query: 451 AEGAK------SWRPKPVNVINFFKACEEESDMGSKE 481
+K W ++++ F E+ D+G+ E
Sbjct: 412 LTISKRVRNSTPWLETTLSIVEIF---AEKGDVGNVE 445
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 115/261 (44%), Gaps = 19/261 (7%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L A+ AR+ E ++ + + +V++ LY + E+E + + ++
Sbjct: 247 YCILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVLLMLYGYLGNQKELERVWATIQ 306
Query: 239 E-KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E IR SY + + + G G + E ++ MK K + + F++M ++Y K G
Sbjct: 307 ELPSIRSK--SYMLAIEAFGRIGQLNRAEEIWLEMKSTKGLK-SVEQFNSMMSVYCKHGF 363
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL---------YRSVFP 348
+++A + + +++ + + YH L G E+ + +L R+ P
Sbjct: 364 IDRAAKLYKNMKASGCKPNAITYHQLALGCLKSGMAEQALKTLDLGLRLTISKRVRNSTP 423
Query: 349 GV-TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
+ T L +++ A GD+ +E++FEE+ K + N ++ YVK ++
Sbjct: 424 WLETTL---SIVEIFAEKGDVGNVERLFEEFHKAKYCRYTFVYNTLIKAYVKAKIYN--P 478
Query: 408 AFFNSIIEEGGKPNSTSWETL 428
+I G +P++ ++ L
Sbjct: 479 NLLKRMILGGARPDAETYSLL 499
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 176/404 (43%), Gaps = 36/404 (8%)
Query: 96 DWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAK 155
W + G + ++ V LRK K AL+V +W+ R +R D + ++ K
Sbjct: 60 SWMRDGLPVHGVDVFHAVNRLRKLNMNKRALQVMEWVI-RERPYRPKELDYSYLVEFTTK 118
Query: 156 VHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
+HG++ E F +P ++ +Y L+ A + + + + KMR+ G+ + L +N
Sbjct: 119 LHGISHGEKLFSRIPVEFQNELLYNNLVIACLDKGVIKLSLEYMKKMRELGFLISHLVFN 178
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ L+ + ++++MK + V +YNI + ++ + E + F MKV
Sbjct: 179 RLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLVKFFSRMKVA 238
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ V PN ++ +A + E + VE ITG + LL LYG +G ++E
Sbjct: 239 Q-VAPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVLLMLYGYLGNQKE 297
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMS 395
+ RVW R + P V + Y I + RIG + E+++ E S K N MMS
Sbjct: 298 LERVWATIREL-PSVRSKSYMLAIEAFGRIGQLNQAEELWLEMESTKGLKSVEQFNSMMS 356
Query: 396 WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
Y K G KA + ++ G KPN+ ++ L AL CLK A +G K
Sbjct: 357 VYCKHGFIGKAAKLYKNMKASGCKPNAITYRQL------------ALGCLKSGMAEQGLK 404
Query: 456 S------------------WRPKPVNVINFFKACEEESDMGSKE 481
+ W ++++ F E+ DMG+ E
Sbjct: 405 TLDLGLRLTISKRVRNSIPWLETTLSIVEIF---AEKGDMGNVE 445
>gi|125535921|gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 201/425 (47%), Gaps = 12/425 (2%)
Query: 69 PMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEV 128
P+ K + K +L+++P++ A L W G +L + EL V+ LR+ + Y AL++
Sbjct: 138 PIKKSQSTLLK-ALLESPRVDVAGALKKWLNDGNTLDRSELFYVLLSLRRRKLYIKALQL 196
Query: 129 YDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVR 188
+++ + L D A ++DL+AK H + AE + ++P + + VY LL V
Sbjct: 197 LEYVE-ESKLIDLGERDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVA 255
Query: 189 ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYS 248
AE + +KM+D G+ V N ++ LY ++ + ++ +++ M+++ ++ +++
Sbjct: 256 IANVKKAEQVFNKMKDLGFPVSVFSCNQLLLLYKRV-DKKKLGDVLTMMEKENVKPSLFT 314
Query: 249 YNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
Y + + + G+ E ME V + M+ D + P+ +T+A YI G EKAE L ++
Sbjct: 315 YKLLVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLFQATIARHYIFGGYREKAEAILEQM 373
Query: 309 ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG-YHAMISSLARIGD 367
+R ++L LY +GK ++V R+W V L + I + ++GD
Sbjct: 374 VGDDINENRSACKFVLPLYAFLGKNDDVERIWK----VCEANARLDECMSAIEAFGKLGD 429
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
+E E+IF+ + + N M+ Y + FDK + + ++G + + ++
Sbjct: 430 VEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDS 489
Query: 428 LAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALL 487
L + + + +A S L +P + + ++ D+ + E + +
Sbjct: 490 LVKLYSDAGEVEKADSIL---HKLSYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKV 546
Query: 488 RQPGY 492
RQ GY
Sbjct: 547 RQMGY 551
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AE + D M + S YN M+ +Y K +D+ + + M + G RL Y+ + +
Sbjct: 433 AEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDSLVK 492
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV-ESRIT 313
G EK + + + + P +TT+ + Y K G V AE+ +V + T
Sbjct: 493 LYSDAGEVEKADSILHKLSYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYT 552
Query: 314 GRDRVPYHYLLSLY 327
GR R Y LL Y
Sbjct: 553 GRIR-QYQLLLEAY 565
>gi|297739953|emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 186/401 (46%), Gaps = 9/401 (2%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
SVLN W++ G+ +++ E+ + + LRK R + AL+ +WM ++ + D A ++D
Sbjct: 174 SVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEH-KKLDMVERDYASRVD 232
Query: 152 LIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
LIAKV G+ AE + +P + + VY LL V AE + +KM+D G+ + +
Sbjct: 233 LIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPITT 292
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
N ++ LY ++ + ++ ++ M+++ ++ +++Y + + + G ME + E
Sbjct: 293 FACNQLLLLYKRV-DKKKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVET 351
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
MK + + PN S + Y+ G EKAE L+ +E +R LL Y ++G
Sbjct: 352 MKAE-GIEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRWVCRVLLPPYAALG 410
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
K ++V R+W + S P + + A I + ++ +E E IF + + +
Sbjct: 411 KADDVERIWKVCESN-PRLPE--FVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYS 467
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
++ Y K + + + G + +W+ L + ++ + +A L+ A
Sbjct: 468 ALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQ 527
Query: 452 EGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
K + +++ + + D+ + E +RQ GY
Sbjct: 528 SPIKPMFSTYMAIMDQYA---KRGDIHNSEKMFHQMRQSGY 565
>gi|224137686|ref|XP_002322619.1| predicted protein [Populus trichocarpa]
gi|222867249|gb|EEF04380.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 193/423 (45%), Gaps = 10/423 (2%)
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
+++ P + SVL+ W GR L + E+ + LRK R + AL++ +W+ +R
Sbjct: 11 AIISAPGVSVHSVLDKWVAEGRDLDQLEISNAMFNLRKRRLFGRALQLSEWVEA-NKRKD 69
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
D A +LDLIAKV G+ AE + +P +LK +Y LL V A A + +
Sbjct: 70 FDERDYASRLDLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSANNAKKAVEVFN 129
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
KM+D + YN ++ LY K + ++ ++ M+++ ++ +++Y + + + G
Sbjct: 130 KMKDLELPITLFSYNQLLLLY-KRHDKKKIADVLLSMEKENVKPSLFTYILLIDTKGQSN 188
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
ME + E MK + + P+ T + MA Y+ G EKAE L+ +E R
Sbjct: 189 DIAGMEQIAETMKAE-GIEPDIKTQAIMARHYVSGGLKEKAEIVLKEMEGGNLEEHRWAC 247
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
++L LYG++GK +EV R+W + P + A I + ++ I E +FE
Sbjct: 248 QFMLPLYGTLGKADEVSRLWKFCKKS-PRLDEC--MAAIEAWGQLKKIPEAEAVFELMSK 304
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ + ++ Y K + + + G + +W+ L + ++ + +
Sbjct: 305 TWKKLSSKHYSALLKVYANNKMLSKGKDLIKQMGDSGCRIGPLTWDALIKLYVEAGEVEK 364
Query: 441 ALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYR-KEKDYM 499
A S L A K P + + + ++ D+ + E +RQ GY+ + K +
Sbjct: 365 ADSILNKAVQQNQMK---PMFSSYMIIMEKYAKKGDIHNAEKMFHRMRQAGYQARSKQFQ 421
Query: 500 SLI 502
+LI
Sbjct: 422 TLI 424
>gi|357119107|ref|XP_003561287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 576
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 183/414 (44%), Gaps = 12/414 (2%)
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
+++D L SVL+ W + G L + E+ V+ L+K R Y A + +W+ RG
Sbjct: 115 TVLDAHSLSVKSVLDKWIEDGNQLERNEVLLVLFHLKKQRLYWKAFQFMEWIE-RGHLLN 173
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
D A LDLIA+ G+ A + +P ++ +Y LL VRAR AE +
Sbjct: 174 FEERDYACHLDLIARNTGIEDARKYIDRVPKPFRNEVLYETLLVNCVRARDIQKAEEVFR 233
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
++RD + N M+ LY ++ +V ++ M+++ I+ ++Y + + G
Sbjct: 234 EIRDLSLPLTVSACNQMILLYKRVAR-TKVADIIMLMEKENIKPSPFTYKLIIDLKGRSN 292
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
+E MK V P++ T + +A YI G +EKA+ + +E R
Sbjct: 293 DISGVEVTLNEMKA-AGVEPDFVTQTMVAKFYISGGLIEKAKAVVSEIEMEYMKDKRHAV 351
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
LL LY ++ K +EV R+W L P + + + A I + ++G IE E+ FE L
Sbjct: 352 RSLLHLYAALSKPDEVARIWKLCTE--PKLDD--FMAAIEAWGKLGCIEQAEETFEAMLE 407
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ N M++ Y + DK + F + +G +W+ L + ++ + +
Sbjct: 408 ATQKLSSKYYNGMLNVYAENKLMDKGKKFVERMSFDGCPNGPLTWDALVKLYVNSGEVAK 467
Query: 441 ALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALL---RQPG 491
A S L+ A E RP + I A + D+ + E L R PG
Sbjct: 468 ADSFLQN--ATEQNPDRRPTYGSYIYLLMAYAKMGDIYNAEKMFDRLKNIRYPG 519
>gi|225441211|ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 186/401 (46%), Gaps = 9/401 (2%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
SVLN W++ G+ +++ E+ + + LRK R + AL+ +WM ++ + D A ++D
Sbjct: 137 SVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEH-KKLDMVERDYASRVD 195
Query: 152 LIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
LIAKV G+ AE + +P + + VY LL V AE + +KM+D G+ + +
Sbjct: 196 LIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPITT 255
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
N ++ LY ++ + ++ ++ M+++ ++ +++Y + + + G ME + E
Sbjct: 256 FACNQLLLLYKRV-DKKKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVET 314
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
MK + + PN S + Y+ G EKAE L+ +E +R LL Y ++G
Sbjct: 315 MKAE-GIEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRWVCRVLLPPYAALG 373
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
K ++V R+W + S P + + A I + ++ +E E IF + + +
Sbjct: 374 KADDVERIWKVCES-NPRLPE--FVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYS 430
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
++ Y K + + + G + +W+ L + ++ + +A L+ A
Sbjct: 431 ALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQ 490
Query: 452 EGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
K + +++ + + D+ + E +RQ GY
Sbjct: 491 SPIKPMFSTYMAIMDQYA---KRGDIHNSEKMFHQMRQSGY 528
>gi|358344183|ref|XP_003636171.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502106|gb|AES83309.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 132
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 72/79 (91%)
Query: 50 IKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWEL 109
+ CS+S+IH+YGT+D+ER+P +KWNAI++++S+M+NP+LGSASVLN WE GR+LTKWEL
Sbjct: 53 VTCSISKIHNYGTLDYERKPNLKWNAIYKRISMMENPELGSASVLNQWENEGRNLTKWEL 112
Query: 110 CRVVKELRKFRRYKHALEV 128
CRVVKELRK+RR+ AL+V
Sbjct: 113 CRVVKELRKYRRHDRALQV 131
>gi|307136025|gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 188/412 (45%), Gaps = 9/412 (2%)
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
++ + P L S L+ W G L++ ++ + LRK R + AL+ +W+ G+
Sbjct: 147 AIWNAPALSVTSALDKWVSEGHELSRDDISSTMFGLRKRRMFGKALQFSEWLEASGQ-LE 205
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
+ +D A LDLIAKV G+ AE + +P++ + VY LL YV A AE + +
Sbjct: 206 FNEADYASHLDLIAKVQGLHKAETYIAKIPNSFRGEAVYRTLLANYVLANDVKKAEEVFN 265
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M+D + + + Y+ M+ LY +I + + ++S M+++ ++ ++Y I + + G
Sbjct: 266 RMKDLEFPMTTFAYDQMLILYKRI-DRRRIADILSLMEKENVKPRPFTYKILIDAKGLSN 324
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
ME V + MK + + + T +A Y+ G +KA L+ E + R P
Sbjct: 325 DISGMEQVVDTMKAE-GIKLDVDTLLLLAKHYVLGGLKDKAMPILKATEEVNSKGSRWPC 383
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
YLL LYG + ++EV R+W + P V A I + ++ +I+ EKIF+ +
Sbjct: 384 RYLLPLYGELQMEDEVRRLWEICEPN-PNVEEC--MAAIVAWGKLKNIQEAEKIFDRVVK 440
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ + M+ Y K + N + + G + + W+ + + ++ + +
Sbjct: 441 TWKRLSTKHYSTMIKVYGDSKMLTKGKELVNQMAKSGCRIDPMIWDAVVKLYVEAGEVEK 500
Query: 441 ALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
A S L A G K P + + D+ + E +RQ GY
Sbjct: 501 ADSFLFKAVKQYGMK---PLFDSYRTLMVHYARKGDVHNSEKIFHKIRQSGY 549
>gi|224106481|ref|XP_002314181.1| predicted protein [Populus trichocarpa]
gi|222850589|gb|EEE88136.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 168/359 (46%), Gaps = 15/359 (4%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
W G + + ++ + LRK R K ALEV +W+ R +RL D + L+
Sbjct: 76 FQSWMGEGFPIHRGDVFHTINRLRKLRLNKRALEVMEWVV-RERPYRLKELDYSYLLEFT 134
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID---KMRDKGYAVH 210
K HG++ E FL +P ++ +Y N + +G L +D KMR++G+ +
Sbjct: 135 TKHHGISHGEKLFLHVPSEFQNELLYN---NLVISCLEKGVIRLSLDYMKKMREQGHPIS 191
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
L +N ++ L+ + ++++M+ + V +YNI + ++ + + + VF
Sbjct: 192 YLIFNRLIILHSSPGSRKMIPKILAQMRADKVVPHVSTYNILMKIEANEHNIDGLVKVFN 251
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
MK K V PN +F +AT + AE + VE +G + L+ LYG +
Sbjct: 252 DMKRFK-VEPNEVSFCILATAHAAARLYTVAEAYVEAVEKSCSGDNWSTLDVLIILYGHL 310
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
GK++E+ R W + + P V + Y I + +IG + E++ WL +KS + R
Sbjct: 311 GKEKELERTWGIVLEL-PHVRSKSYMLAIEAYGKIGQLSRAEEL---WLEMKSIHGLRST 366
Query: 391 ---NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
N M+S Y K G KA F + G K NS ++ LA G ++ + EAL L+
Sbjct: 367 EQFNSMLSVYCKHGLIKKATGNFREMEINGCKANSITFRHLALGCLKANLVEEALKTLE 425
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 35/222 (15%)
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKE-KGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
V S Y + + Y KI + E + EMK G+R +N LS G +K G
Sbjct: 329 VRSKSYMLAIEAYGKIGQLSRAEELWLEMKSIHGLR-STEQFNSMLSVYCKHGLIKKATG 387
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
F M+++ N TF +A +K VE+A ++L + +T +RV
Sbjct: 388 NFREMEIN-GCKANSITFRHLALGCLKANLVEEALKTLE-MGKNLTTSNRV--------- 436
Query: 328 GSVGKKEEVYRVWNLYRSVFPGV-TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
++ P + T L ++I A GD+ +EK+FEE K
Sbjct: 437 ----------------KNSTPWLETTL---SIIELFAEKGDVVNVEKLFEELAKAKYIRH 477
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ N+++ YVK + + +I G +P++ ++ +
Sbjct: 478 TFVFNILIKAYVKAKIY--SPNLLRRMILGGARPDAETYSLI 517
>gi|115487560|ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|125578643|gb|EAZ19789.1| hypothetical protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 611
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 201/424 (47%), Gaps = 10/424 (2%)
Query: 69 PMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEV 128
P+ K + K +L+++P++ A L W G +L + EL V+ LR+ + Y AL++
Sbjct: 138 PIKKSQSTLLK-ALLESPRVDVAGALKKWLNDGNTLDRSELFYVLLILRRRKLYIKALQL 196
Query: 129 YDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVR 188
+++ + L D A ++DL+AK H + AE + ++P + + VY LL V
Sbjct: 197 LEYVE-ESKLIDLGERDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVA 255
Query: 189 ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYS 248
AE + +KM+D G+ V N ++ LY ++ + ++ +++ M+++ ++ +++
Sbjct: 256 IANVKKAEQVFNKMKDLGFPVSVFSCNQLLLLYKRV-DKKKLGDVLTMMEKENVKPSLFT 314
Query: 249 YNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
Y + + + G+ E ME V + M+ D + P+ +T+A YI G EK+E L ++
Sbjct: 315 YKLLVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLFQATIARHYIFGGYREKSEAILEQM 373
Query: 309 ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDI 368
+R ++L LY +GK ++V R+W + + + I + ++GD+
Sbjct: 374 VGDDINENRSACKFVLPLYAFLGKNDDVERIWKVCEA---NARLDECMSAIEAFGKLGDV 430
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
E E+IF+ + + N M+ Y + FDK + + ++G + + ++L
Sbjct: 431 EKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDSL 490
Query: 429 AEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
+ + + +A S L +P + + ++ D+ + E + +R
Sbjct: 491 VKLYSDAGEVEKADSIL---HKLSYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKVR 547
Query: 489 QPGY 492
Q GY
Sbjct: 548 QMGY 551
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AE + D M + S YN M+ +Y K +D+ + + M + G RL Y+ + +
Sbjct: 433 AEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDSLVK 492
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV-ESRIT 313
G EK + + + + P +TT+ + Y K G V AE+ +V + T
Sbjct: 493 LYSDAGEVEKADSILHKLSYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYT 552
Query: 314 GRDRVPYHYLLSLY 327
GR R Y LL Y
Sbjct: 553 GRIR-QYQLLLEAY 565
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 186/406 (45%), Gaps = 13/406 (3%)
Query: 96 DWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAK 155
W G + + ++ + LRK R K ALEV +W+ R + +R++ D + L+ K
Sbjct: 79 SWMGDGFPIHRGDIFHAINRLRKLERNKRALEVMEWVI-REKPYRINELDYSYLLEFTIK 137
Query: 156 VHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
HG++ E F ++P + ++ L+ A + + + KMR+ G+++ L +N
Sbjct: 138 HHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVGHSISHLVFN 197
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ L+ + + ++S+MK + L V +YNI + ++ + E + VF M+
Sbjct: 198 RLIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEANEHNIEGLMRVFSDMRRA 257
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
K V PN ++ +AT + E + +E I G + Y L+ LYG + K++E
Sbjct: 258 K-VEPNEVSYCIVATAHAVAKLYTVVEAYVEALEKSIAGNNWSTYDVLIILYGYLNKEKE 316
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA---NL 392
+ R W + + FP + + + I + RIG + E E WL +K+ + N
Sbjct: 317 LERTWGIIQG-FPHIPSKSFILAIEAFGRIGLLSRAE---ELWLEMKTKRGIKATDQFNS 372
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK-GAFAA 451
++S Y + G KA F I G KPN+ ++ LA G ++ + EAL L G+
Sbjct: 373 ILSVYCRHGLIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEEALKTLDLGSNTT 432
Query: 452 EGAKSWR---PKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRK 494
K R P ++ + E D+ + E L++ Y +
Sbjct: 433 SSTKIVRKSTPWLETTLSMIEILAERGDIENTEKLFKELKEAKYTR 478
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 140/341 (41%), Gaps = 22/341 (6%)
Query: 101 GRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVA 160
G S++ R++ FRR K ++ M + ++ L S I + + A H +
Sbjct: 188 GHSISHLVFNRLIILHSSFRRRKIIPKILSQM--KADKVPLHVSTYNILMKIEANEHNIE 245
Query: 161 SAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
F + + Y + A+ A++ E ++ + + Y+V++
Sbjct: 246 GLMRVFSDMRRAKVEPNEVSYCIVATAHAVAKLYTVVEAYVEALEKSIAGNNWSTYDVLI 305
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
LY + + E+E + + + S+ + + + G G + E ++ MK + +
Sbjct: 306 ILYGYLNKEKELERTWG-IIQGFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKTKRGI 364
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
F+++ ++Y + G ++KA E R++E+ + + + +L G EE +
Sbjct: 365 KAT-DQFNSILSVYCRHGLIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEEALK 423
Query: 339 VWNL----------YRSVFPGV-TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
+L R P + T L +MI LA GDIE EK+F+E K +
Sbjct: 424 TLDLGSNTTSSTKIVRKSTPWLETTL---SMIEILAERGDIENTEKLFKELKEAKYTRYT 480
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ N ++ YVK + +I G +P+S ++ +
Sbjct: 481 FVYNTLIKAYVKAKIHNP--NLLRRMIVGGARPDSETYSLI 519
>gi|302798913|ref|XP_002981216.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
gi|300151270|gb|EFJ17917.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
Length = 463
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 180/412 (43%), Gaps = 24/412 (5%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L+ W GR + E+ +K L+ R+K A E+ DW+ + L LDL
Sbjct: 25 ILHQWIAEGRE-SHGEIIAAMKRLKWLGRFKQAYEISDWVI-KERSLELQKFHFINHLDL 82
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYG-------ALLNAYVRARMRGNAELLIDKMRDK 205
+V + +A++F L+ K RVY + YV + A L++ M++K
Sbjct: 83 TGRVVNMNAAKNFLLT-----KMPRVYAKSEAALITMFENYVIHSLLSKARLVLKLMKEK 137
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ +N + LY K+ D + ++ EM++ I +V +YNI + +G TE M
Sbjct: 138 NLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYNILIGIKAKKGDTEGM 197
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR-VESRITGRDRVPYHYLL 324
E +F MK D PN T+A+ Y+ G EKA L+ V S R + ++
Sbjct: 198 ERLFSKMKCDGDGTPNCEILCTLASGYVNAGDHEKAMAYLKEAVASEEFQESRRVHDKVI 257
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
+LY ++G+ + + R+W R FP V+ Y A I++ ++G I+ EK+F E ++
Sbjct: 258 ALYAAMGRADMIDRIWRFTRR-FPVVSANSYVATIAAYEKVGRIDRAEKVFAELTEKRTL 316
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
P + Y + G KAE I G N+ S+ L G+++ A
Sbjct: 317 LRPAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLVAGYMKSGNPKMAAET 376
Query: 445 LKGAFAAEGAKSWRPKPV--NVINFFKACEEESDMGSKEAFVALLRQPGYRK 494
L F R P V+ K + +D+ S E +R+ Y K
Sbjct: 377 LNRMF------EERVPPCFDTVMLILKEHAKNADVSSAELLFQDMRRESYNK 422
>gi|224089975|ref|XP_002308888.1| predicted protein [Populus trichocarpa]
gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 187/413 (45%), Gaps = 12/413 (2%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN-NRGERFRLSASDAAIQL 150
SVL+ W G+ L + E+ + LRK R + AL++ +W N+ + F D A +L
Sbjct: 105 SVLDKWVAEGKDLDRLEISNAMINLRKRRMFGRALQLSEWFEANKPQEF--VERDYASRL 162
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
DLIAKV G+ AE + +P + K +Y LL V AE + +KMRD + +
Sbjct: 163 DLIAKVRGLHKAEVYIDKIPKSFKGEVIYRTLLANCVVDHNVKKAEEVFNKMRDLEFPIT 222
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
N ++ LY ++ + ++ ++ M+++ ++ +++Y I + + G M+ + E
Sbjct: 223 PFACNQLLLLYKRL-DKKKIADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTGMDQIVE 281
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
MK + + P+ T + MA Y+ G EKAE L+ +E R ++L LYG++
Sbjct: 282 TMKAE-GIEPDIRTQAIMARHYVSGGLKEKAEAILKEMEGGNLEEHRWACRFMLPLYGAL 340
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
GK +EV RVW P + A I + R+ I+ E +FE R
Sbjct: 341 GKADEVSRVWKFCEKS-PRLDEC--MAAIEAWGRLKKIDEAEAVFELMSKTWKKLSSRHY 397
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
+ ++ Y K + + + G + +W+ L + ++ + +A S L A
Sbjct: 398 STLLKVYANHKMLSKGKDLIKRMGDSGCRIGPLTWDALVKLYVEAGEVEKADSILNKAVQ 457
Query: 451 AEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKE-KDYMSLI 502
K P + + + + D+ + E +RQ GY+ + + +LI
Sbjct: 458 QNKIK---PMYSSFLIIMERYATKGDIHNAEKMFHRMRQAGYQARIRQFQTLI 507
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 174/358 (48%), Gaps = 9/358 (2%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
+ + W GR++ + + + LR+ R ++ AL+V +W+ R ++LS D + L
Sbjct: 62 GAAMRGWMADGRAVHRGHVFHAINRLRRHRLHRTALQVMEWIV-RERPYKLSELDYSYLL 120
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ AKVHG++ AE FL +P + +Y L+ A + ++ + KMR+ +
Sbjct: 121 EFTAKVHGISEAESLFLRVPQECRKELLYNNLVMAALDLNHIKHSYAYMRKMRELSLPIS 180
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
YN ++ L+ + ++S+MK + +YNI L ++ + + + VF
Sbjct: 181 PYVYNRLIILHSSPGRRKTISKILSQMKADRVVPHTSTYNILLKIQANEHNIDGLARVFN 240
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
MK K + PN T+ +A + + +E+ +TG + LL LYG +
Sbjct: 241 GMKRAK-IEPNEITYGILAIAHAVARLYTVCHTYVEAIENSMTGTNWSTLEILLILYGYL 299
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
GK++E+ R W + + + P + + + I + ++G I+ EKI W+ +KS+ +
Sbjct: 300 GKEKELKRTWEIMQDL-PHIRSKSFTLAIEAFGKVGSIDQAEKI---WIHIKSTKKLSLT 355
Query: 391 ---NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
N M+S Y + G DKA + F + G +PN+ ++ LA G ++ + EAL+ +
Sbjct: 356 EQFNSMLSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNTI 413
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 115/263 (43%), Gaps = 21/263 (7%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG L A+ AR+ ++ + + + +++ LY + + E++ M
Sbjct: 253 TYGILAIAHAVARLYTVCHTYVEAIENSMTGTNWSTLEILLILYGYLGKEKELKRTWEIM 312
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ + S+ + + + G GS ++ E ++ +K K ++ F++M ++Y + G
Sbjct: 313 QDLP-HIRSKSFTLAIEAFGKVGSIDQAEKIWIHIKSTKKLSLT-EQFNSMLSVYCRHGV 370
Query: 298 VEKAEESLRRVESRITGRDRVPY-HYLLSLYGS-----------VGKKEEVYRVWNLYRS 345
V+KA + + + + + Y H L S +GKKE V + RS
Sbjct: 371 VDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNTIDMGKKEVVTKK---VRS 427
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
P + H ++ + A IGD+E ++++ E K S + + N ++ YVK ++
Sbjct: 428 STPWLETT--HLLLENFAEIGDLENAKRLYSELNESKYSLNSFVYNTLLKAYVKAKVYEP 485
Query: 406 AEAFFNSIIEEGGKPNSTSWETL 428
++I G P++ ++ L
Sbjct: 486 --DLSRTMILRGAMPDAETYSLL 506
>gi|125532538|gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 207/463 (44%), Gaps = 76/463 (16%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGG-RSLTKWELCRVVKELRKFRRYKHALEVYDWM 132
+++FR+++ +P+L + VL W R + K E+ ++K L + RR+ AL++ WM
Sbjct: 82 DSLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWM 141
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
R LS D A +L+LI KVHG+ A ++F S+PD LK ++ YG+L
Sbjct: 142 TERL-HLHLSPGDVANRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSL---------- 190
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
+ Y + ++ E + +M+ G+ Y+YN+
Sbjct: 191 -------------------------LKCYAEANCVEKAEELFEKMRGMGMA-SSYAYNVM 224
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+ G E++ + + M+ + + P+ +T T+ + LR+ ++ +
Sbjct: 225 MRLYLQNGQVERVHSMHQAME-ESGIVPDVSTTHTLVAV-------------LRKKKTLV 270
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
Y+++ E++ + N+ N Y I L ++ D+ G E
Sbjct: 271 AA-------YVVA--------EDIKAIENVLEKA--NSCNSMYMCRIGVLLKMNDMVGAE 313
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
K +EEW S +D R+ NL++ Y KEG DKAEA + I++G P + + LA G+
Sbjct: 314 KAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAGGY 373
Query: 433 IRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+ ++ +A K A A+ + W P NV+ E+ ++ + E +LL++
Sbjct: 374 FKVGQVSKAADLTKKALAS-ASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMASLLQRLIT 432
Query: 493 RKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLLS 529
Y L+ G + + KK+ ++DE++E +L+
Sbjct: 433 PTRDIYHGLLKTYVNAGKPVSDLLDRMKKDGMEADEETEKILA 475
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 182/407 (44%), Gaps = 12/407 (2%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
W G + + + + LRK + K ALEV +W+ R +R D + L+
Sbjct: 101 FQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVV-RERPYRPKELDYSYLLEFT 159
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
K+HG++ E F +P ++ +Y L+ A + + + + KMR+ G+ + L
Sbjct: 160 TKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHPISYLV 219
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+N ++ L+ + ++++MK + V +YNI + ++ + E + VF MK
Sbjct: 220 FNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKVFGEMK 279
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ V PN ++ +AT + AE + VE ITG + L+ LYG +GK
Sbjct: 280 -QQQVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWSTLDVLIILYGYLGKP 338
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--- 390
++ R W + + + P V + Y I + RIG + E++ WL +KS + +
Sbjct: 339 TDLERTWGIVQEL-PHVRSKSYMLAIEAFGRIGQLNRAEEL---WLEIKSKKELKSTEQF 394
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL---KG 447
N M+S Y K G DKA F + G K N+ ++ LA G ++ + EAL L KG
Sbjct: 395 NSMISVYSKHGFIDKASGLFREMEMNGCKANAITYRNLALGCLKAGLLEEALKTLELGKG 454
Query: 448 AFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRK 494
+ + P ++ + E D+ + E L+ Y +
Sbjct: 455 LTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTR 501
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 176/359 (49%), Gaps = 9/359 (2%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ + + W GR++ + + + LR+ R ++ L+V +W+ R ++LS D +
Sbjct: 64 ACAAIRGWMAAGRAVHRGHVFHAINRLRRRRLHRTGLQVMEWVI-RERPYKLSELDYSYL 122
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
L+ AKVHG++ AE FL +P ++ +Y L+ A + + + + KMR+ +
Sbjct: 123 LEFTAKVHGISEAESLFLRIPQEYRNELLYNNLVMACLELSLIKLSYGYMRKMRELSLPI 182
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
YN ++ L+ + ++++MK + +YNI L ++ + + + VF
Sbjct: 183 SPYVYNRLIILHSSEGRRKTIPKILAQMKASKVTPHTSTYNILLKIQANEHNIDGVARVF 242
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
MK K V PN T+ +A + ++ + +++ +TG + LL LYG
Sbjct: 243 NDMKRAK-VEPNEITYGILAISHAVARLYTVSQTYIEAIKNSMTGTNWSTQEILLILYGY 301
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+GK++E+ W L + V P + + + I + +IG IE E+I W +KS+ R+
Sbjct: 302 LGKEKELKMTWKLMQ-VLPHIRSKSFTLAIEAFGKIGSIEQAEEI---WGEIKSARKLRL 357
Query: 390 A---NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
N M+S Y + G DKA A F + G +PN+ ++ LA G ++ + +AL+ +
Sbjct: 358 TEQFNSMLSVYCRHGVVDKASAVFKEMRASGCQPNAITYRHLALGCLKAGLVKQALNTM 416
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 116/263 (44%), Gaps = 21/263 (7%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG L ++ AR+ ++ I+ +++ + +++ LY + + E++ M ++
Sbjct: 256 TYGILAISHAVARLYTVSQTYIEAIKNSMTGTNWSTQEILLILYGYLGKEKELK-MTWKL 314
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ + S+ + + + G GS E+ E ++ +K + + F++M ++Y + G
Sbjct: 315 MQVLPHIRSKSFTLAIEAFGKIGSIEQAEEIWGEIKSARKLRLT-EQFNSMLSVYCRHGV 373
Query: 298 VEKAEESLRRVESRITGRDRVPY-HYLLSLYGS-----------VGKKEEVYRVWNLYRS 345
V+KA + + + + + Y H L + +GKKE V R R+
Sbjct: 374 VDKASAVFKEMRASGCQPNAITYRHLALGCLKAGLVKQALNTMDMGKKEVVTRK---VRN 430
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
P + H ++ + A IGD+E + ++ E K + + N ++ YVK ++
Sbjct: 431 STPWLETT--HMLLENFAEIGDLENAKIVYAELNESKYCRNSFVYNTLLKAYVKAKVYEP 488
Query: 406 AEAFFNSIIEEGGKPNSTSWETL 428
F ++I G P++ + L
Sbjct: 489 --NFVRTMILRGAMPDAETHSLL 509
>gi|356498381|ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 192/412 (46%), Gaps = 10/412 (2%)
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
++ + P L S LN W + G+ L++ E+ V+ELR+ + Y A +++ W+ + ++
Sbjct: 149 AIANAPGLSVDSALNKWVEHGKELSRKEILLAVRELRRRKMYGRAFQLFQWLES-NKKLE 207
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
SD A QLDLIAK+ G+ AE + S+P++ + +Y LL E + +
Sbjct: 208 FMESDYASQLDLIAKLRGLPKAEKYIESVPESFRGELLYRTLLANCASQNNLIATEKIFN 267
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
KM+D + + N + L K + ++ ++ M+++ ++ +++Y I + S G
Sbjct: 268 KMKDLDLPLTAFACN-QLLLLYKKLDKKKIADVLLLMEKENVKPSLFTYRILIDSKGQSN 326
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
ME VFE MK ++ P+ + +A Y G EKAE L+ +E ++
Sbjct: 327 DIAGMEQVFETMK-EEGFEPDIQIQALLARHYTSSGLKEKAEAMLKEMEGENLKENQWVC 385
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
LL LY ++GK +EV R+W + S P V + A + + ++ IE E +F E +S
Sbjct: 386 ATLLRLYANLGKADEVERIWKVCESK-PRVEDC--LAAVEAWGKLNKIEEAEAVF-EMVS 441
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
K + + ++++ Y K + + + G + +W+ L + +I+ + +
Sbjct: 442 KKWKLNSKNYSVLLKIYANNKMLTKGKELVKLMADSGVRIGPLTWDALVKLYIQAGEVEK 501
Query: 441 ALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
A S L A +P + + + D+ + E +RQ GY
Sbjct: 502 ADSILHKAIQ---QNQLQPMFTTYLAILEQYAKRGDVHNSEKIFLKMRQAGY 550
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 185/410 (45%), Gaps = 12/410 (2%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
S L W G + ++ + LRK R K ALE+ +W+ R +RL + + L
Sbjct: 82 GSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWII-RERPYRLGELEYSYLL 140
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ K+HGV+ E F +P ++ +Y L+ A + + A + KMR+ GY
Sbjct: 141 EFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTS 200
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
L YN ++ + ++ MK V +Y+I + ++ + + + F+
Sbjct: 201 HLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFD 260
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
MK V PN ++ +A + AE +E ITG + L+ LYG +
Sbjct: 261 GMK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILYGRL 319
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
GK++E+ R WN+ R F V + Y + AR+G+++ E+++ E +VK +
Sbjct: 320 GKEKELARTWNVIRG-FHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQF 378
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
N ++S Y K+G +KA F + G KPNS ++ LA G + + + EAL ++
Sbjct: 379 NSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEMGLN 438
Query: 451 AEGAKS------WRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRK 494
+ +KS W +++I F E+ D+ + E ++ Y +
Sbjct: 439 LKTSKSIGSSTPWLETTLSIIECFA---EKGDVENSEKLFEEVKNAKYNR 485
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 35/222 (15%)
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKE-KGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
V S Y + + ++ D E + EMK KG++ + +N LS G EK G
Sbjct: 338 VRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLK-ETEQFNSLLSVYCKDGLIEKAIG 396
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
VF M PN T+ +A + + + +E+L+ +E + L
Sbjct: 397 VFREM-TGNGFKPNSITYRHLA---LGCAKAKLMKEALKNIEMGLN----------LKTS 442
Query: 328 GSVGKKEEVYRVWNLYRSVFPGV-TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
S+G S P + T L ++I A GD+E EK+FEE + K +
Sbjct: 443 KSIG-------------SSTPWLETTL---SIIECFAEKGDVENSEKLFEEVKNAKYNRY 486
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ N + YVK +D F ++ G +P++ S+ L
Sbjct: 487 AFVYNALFKAYVKAKVYD--PNLFKRMVLGGARPDAESYSLL 526
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 174/358 (48%), Gaps = 9/358 (2%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
+ + W GR++ + + + LR+ R ++ AL+V +W+ R ++LS D + L
Sbjct: 69 GAAMRGWMADGRAVHRGHVFHAINRLRRHRLHRTALQVMEWIV-RERPYKLSELDYSYLL 127
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ AKVHG++ AE FL +P + +Y L+ A + + ++ + KMR+ +
Sbjct: 128 EFTAKVHGISEAESLFLRVPQEYQKELLYNNLVMAALDLDLIKHSYAYMRKMRELSLPIS 187
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
YN ++ L+ + ++ +MK + +YNI L ++ + + + VF
Sbjct: 188 PYVYNRLIILHSSPSRRKTISKILYQMKADRVTPHTSTYNILLKIQANEHNIDGLARVFS 247
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
MK K + PN T+ +A + + +E+ +TG + LL LYG +
Sbjct: 248 DMKRAK-IEPNEITYGILAISHAVARLYTVCHTYVEAIENSMTGTNWSTLEILLILYGYL 306
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
GK++E+ R W + + + P V + + I + ++G I+ EKI W+ +KS+ +
Sbjct: 307 GKEKELKRTWEIMQDL-PHVRSKSFTVAIEAFGKVGSIDQAEKI---WVQIKSTKKLSLT 362
Query: 391 ---NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
N ++S Y + G DKA + F + G +PN+ ++ LA G ++ + EAL+ +
Sbjct: 363 EQFNSILSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNTI 420
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 31/220 (14%)
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
V S + V + + K+ D+ E + ++K +N LS G +K V
Sbjct: 325 VRSKSFTVAIEAFGKVGSIDQAEKIWVQIKSTKKLSLTEQFNSILSVYCRHGVVDKASSV 384
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
F+ M+ + PN T+ +A +K G V++A ++
Sbjct: 385 FKEMRAN-GCQPNAITYRHLALGCLKSGLVKEALNTI----------------------- 420
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
+GKKE V + RS P + H ++ + A IGD+E ++++ E K S +
Sbjct: 421 DMGKKEVVTKK---VRSSTPWLETT--HLLLENFAEIGDLENAKRLYSELNESKYSRNSF 475
Query: 389 IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ N ++ YVK ++ ++I G P++ ++ L
Sbjct: 476 VYNTLLKAYVKAKVYEP--DLLRTMILRGAMPDAETYSLL 513
>gi|449437992|ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 199/430 (46%), Gaps = 29/430 (6%)
Query: 68 RPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALE 127
RP +NAI+ K S++ P S L+ W G+ L +C + F +
Sbjct: 140 RPSELFNAIW-KASVLSVP-----SALDKWVSEGKDLN---ICFL------FYHLIACIS 184
Query: 128 VY-----DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGAL 182
V+ +W+ G+ + D A +LDLIAKV G+ AE + +P + + ++ L
Sbjct: 185 VWVSQFSEWLEANGQ-LEFNQRDYASRLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTL 243
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
L YV A AE + +KM+D + + ++ M+ LY +I + ++ ++S M+++ +
Sbjct: 244 LANYVAANNVKKAEEVFNKMKDLEFPMTPFAHDQMLILYKRIDKR-KLADILSLMEKENV 302
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
+ ++Y I + + G ME V + MK + + P+ +T S +A Y+ G +KA+
Sbjct: 303 KPSPFTYKILIDAKGLCNDISGMEQVVDSMKAE-GIKPDVSTLSLLAKHYVSNGLKDKAK 361
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
L+ +E + R+P LL LYG++ ++EV R+W + + P + A I +
Sbjct: 362 VILKDMEENNSKGSRLPCRILLPLYGALQMEDEVRRLWKICEA-NPHMEE--SMAAIVAW 418
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
++ +++ EKIF+ ++ R N MM+ Y K + N + E G + +
Sbjct: 419 GKLKNVQEAEKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDE 478
Query: 423 TSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEA 482
+W+ + + ++ + +A S L A K P I D+ + E
Sbjct: 479 LTWDAVVKLYVEAGEVEKADSFLVKAVLQNKKK---PMFTTYITLMDRYASRGDVPNVEK 535
Query: 483 FVALLRQPGY 492
A++R+ GY
Sbjct: 536 NFAMMRRLGY 545
>gi|302801860|ref|XP_002982686.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
gi|300149785|gb|EFJ16439.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
Length = 463
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 181/412 (43%), Gaps = 24/412 (5%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L+ W GR + E+ +K L+ R+K A E+ DW+ + L L+L
Sbjct: 25 ILHQWIAEGRE-SHGEIIAAMKRLKWLGRFKQAYEISDWVI-KERSLELQKFHFINHLEL 82
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYG-------ALLNAYVRARMRGNAELLIDKMRDK 205
+V + +A++F L+ K RVY + YV + A L++ M++K
Sbjct: 83 TGRVVNMNAAKNFLLT-----KMPRVYAKSEAALITMFENYVIHSLLSKARLVLKLMKEK 137
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ +N + LY K+ D + ++ EM++ I +V +YNI + +G TE M
Sbjct: 138 NLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYNILIGIKAKKGDTEGM 197
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD-RVPYHYLL 324
E +F MK D PN T+A+ Y+ G EKA L+ + R+ R + ++
Sbjct: 198 ERLFSKMKCDGDGTPNGEILCTLASGYVNAGDHEKAMAYLKEAVASDEFRESRRVHDKVI 257
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
+LY ++G+ + + R+W R FP V+ Y A I++ ++G I+ EK+F E ++
Sbjct: 258 ALYAAMGRADMIDRIWRFTRR-FPVVSANSYVATIAAYEKVGRIDRAEKVFAELTEKRTL 316
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
P + Y + G KAE I G N+ S+ L G+++ A
Sbjct: 317 LRPAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLVAGYMKSGNPKMAAET 376
Query: 445 LKGAFAAEGAKSWRPKPV--NVINFFKACEEESDMGSKEAFVALLRQPGYRK 494
L F R P V+ K + +D+ S E +R+ Y K
Sbjct: 377 LTRMF------EERVPPCFDTVMLILKEHAKNADVNSAELLFQDMRRESYNK 422
>gi|115482780|ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial [Oryza sativa Japonica Group]
Length = 451
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 207/463 (44%), Gaps = 76/463 (16%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGG-RSLTKWELCRVVKELRKFRRYKHALEVYDWM 132
+++FR+++ +P+L + VL W R + K E+ ++K L + RR+ AL++ WM
Sbjct: 54 DSLFRRVAAAADPRLPLSPVLEQWCLAEERHVAKPEVQSIIKYLCRRRRFSQALQLSMWM 113
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
R LS D A +L+LI KV+G+ A ++F S+PD LK ++ YG+L
Sbjct: 114 TER-LHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSL---------- 162
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
+ Y + ++ E + +M+ G+ Y+YN+
Sbjct: 163 -------------------------LKCYAEANCVEKAEELFEKMRGMGMA-SSYAYNVM 196
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+ G E++ + + M+ + + P+ +T T+ + LR+ ++ +
Sbjct: 197 MRLYLQNGQVERVHSMHQAME-ESGIVPDVSTTHTLVAV-------------LRKKKTLV 242
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
Y+++ E++ + N+ N Y I L ++ D+ G E
Sbjct: 243 AA-------YVVA--------EDIKAIENVLEKA--NSCNSMYMCRIGVLLKMNDMVGAE 285
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
K +EEW S +D R+ NL++ Y KEG DKAEA + I++G P + + LA G+
Sbjct: 286 KAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAGGY 345
Query: 433 IRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+ ++ +A K A A+ + W P NV+ E+ ++ + E ++LL++
Sbjct: 346 FKVGQVSKAADLTKKALAS-ASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVT 404
Query: 493 RKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLLS 529
Y L+ G + KK+ ++DE++E +L+
Sbjct: 405 PTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEETEKILA 447
>gi|356534606|ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 195/431 (45%), Gaps = 18/431 (4%)
Query: 66 ERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHA 125
+++ +W + +++ P L S L+ W G+ L++ E+ V+ELR+ + Y A
Sbjct: 125 KKKSQARWTQLKLFKVILNAPGLSVDSALSKWAGQGKELSRKEIFLAVRELRRRKMYGRA 184
Query: 126 LEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNA 185
+++ W+ + ++ SD A QLDLIAK+ G+ AE + S+P++ + +Y LL
Sbjct: 185 FQLFQWLES-NKKLEFMESDYASQLDLIAKLRGLPQAEKYIESVPESFRGELLYRTLLAN 243
Query: 186 YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE----MKEKG 241
+E + +KM+D LP V + + + +++ M+++
Sbjct: 244 CASQNNLIASEKIFNKMKD-----LDLPLTVFACNQLLLLYKKLDKKKIADVLLLMEKEN 298
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
++ +++Y I + S G ME VFE MK ++ P+ + +A Y G EKA
Sbjct: 299 VKPSLFTYRILIDSKGHSNDIAGMEQVFETMK-EEGFEPDIQLQALLARHYTSAGLKEKA 357
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
E L+ +E + LL LY ++GK +EV R+W + S P V + A + +
Sbjct: 358 EAILKEIEGENLEEKQWVCATLLRLYANLGKADEVERIWKVCESK-PRVDDC--LAAVEA 414
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
++ IE E +F E S K + + ++++ Y K + + + G +
Sbjct: 415 WGKLEKIEEAEAVF-EMASKKWKLNSKNYSILLKIYANNKMLAKGKDLIKRMADSGLRIG 473
Query: 422 STSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKE 481
+W L + +I+ + +A S L+ A +P ++ + + D+ + E
Sbjct: 474 PLTWNALVKLYIQAGEVEKADSVLQKAIQ---QSQLQPMFTTYLDILEQYAKRGDVHNSE 530
Query: 482 AFVALLRQPGY 492
+RQ GY
Sbjct: 531 KIFLKMRQAGY 541
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 184/408 (45%), Gaps = 14/408 (3%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
W + G + + ++ + LRK + K ALEV +W+ R +R D + L+
Sbjct: 72 FQSWMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVI-RERPYRPKELDYSYLLEFT 130
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSL 212
K+HG++ E F +P ++ +Y L+ A + + +R + E + KMR+ G+ + L
Sbjct: 131 TKLHGISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVIRLSLEYM-KKMRELGHPISHL 189
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
+N ++ L+ + ++++MK + V +YNI + ++ + E + VF M
Sbjct: 190 IFNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIEANEHNVEGLIKVFGEM 249
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
K V PN +F +A + AE + VE TG + L+ LYG + K
Sbjct: 250 K-RLEVEPNEVSFCILAIAHAVARLYTVAEAYVEAVEKSYTGDNWSTLDVLIILYGYLRK 308
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+++ R+W + + P V + Y I + RIG + E+++ E S+K N
Sbjct: 309 GKKLDRIWGTVKEL-PHVRSKSYILAIEAFGRIGQLGRAEELWLEMKSLKGLKSTEQFNS 367
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAF--- 449
M+S Y K G KA F + G KPN+ ++ LA G ++ + EAL L+
Sbjct: 368 MLSIYCKCGLVKKATDIFREMDRNGCKPNAITFRHLALGCLKAELVEEALKTLEMGMDFT 427
Query: 450 ---AAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRK 494
+ + W +++ F E+ D+ + E F L + Y +
Sbjct: 428 TSNKIKNSIPWLETTFSIVEIFA---EKGDVANAEKFFEELHKAKYAR 472
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 186/410 (45%), Gaps = 12/410 (2%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
S L W G + ++ + LRK R K ALE+ +W+ R +R + + L
Sbjct: 84 GSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWII-RERPYRPGELEYSYLL 142
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ K+HGV+ E F +P ++ +Y L+ A + + A + KMR+ GY
Sbjct: 143 EFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTS 202
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
L YN ++ + ++ MK V +Y+I + ++ + + + F+
Sbjct: 203 HLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFD 262
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
MK V PN ++ +A + AE +E +TG + L+ LYG +
Sbjct: 263 GMK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSVTGNNWSTLDILMILYGRL 321
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
GK++E+ R WN+ R F V + Y + A++G+++ E+++ E +V+ +
Sbjct: 322 GKEKELVRTWNVIRG-FHHVRSKSYLLATEAFAQVGNLDRAEELWLEMKNVRGLKETEQF 380
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL------SC 444
N ++S Y K+G +KA F ++ +G KPNS ++ LA G + + + EAL S
Sbjct: 381 NSLLSVYCKDGLIEKAIGVFREMMGDGFKPNSITYRHLALGCAKAKLMKEALKNIEMGSN 440
Query: 445 LKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRK 494
LK + + + W +++I F E+ D+ + E ++ Y +
Sbjct: 441 LKTSNSIRSSTPWLETTLSIIECFA---EKGDVENSEKLFEEVKNAKYNR 487
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKE-KGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
V S Y + + ++ D E + EMK +G++ + +N LS G EK G
Sbjct: 340 VRSKSYLLATEAFAQVGNLDRAEELWLEMKNVRGLK-ETEQFNSLLSVYCKDGLIEKAIG 398
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
VF M D PN T+ +A + + + +E+L+ +E
Sbjct: 399 VFREMMGD-GFKPNSITYRHLA---LGCAKAKLMKEALKNIE-----------------M 437
Query: 328 GSVGKKEEVYRVWNLYRSVFPGV-TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
GS K N RS P + T L ++I A GD+E EK+FEE + K +
Sbjct: 438 GSNLKTS------NSIRSSTPWLETTL---SIIECFAEKGDVENSEKLFEEVKNAKYNRY 488
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ N + YVK +D F ++ G +P++ S+ L
Sbjct: 489 AFVYNALFKAYVKAKVYDP--NLFKRMVLGGARPDAESYSLL 528
>gi|5103846|gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 195/409 (47%), Gaps = 15/409 (3%)
Query: 88 LGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAA 147
L S L+ W + G+ + E + +LRK R + AL++ +W++ ++F + D A
Sbjct: 169 LSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDE-NKQFEMEERDYA 227
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+LDLI+KV G E + ++P++ + VY LL +V AE + +KM+D G+
Sbjct: 228 CRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGF 287
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ + N M+ LY ++ + ++ ++ ++++ ++ ++ +Y I + + GS ME
Sbjct: 288 PLSTFTCNQMLILYKRV-DKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQ 346
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ E MK + V + + +A Y G EKAE+ L+ +E +R LLS+Y
Sbjct: 347 IVETMK-SEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVY 405
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM---EKIFEEWLSVKSS 384
G + +++EV RVW + N Y+ +++++ G I+ + E +FE+ L +
Sbjct: 406 GYLQREDEVRRVWKICEE------NPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHR 459
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
+ ++++ YV + + + + G + +W+ + + ++ + +A S
Sbjct: 460 VSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESS 519
Query: 445 LKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYR 493
L A +K +P + + D+ + E ++Q GY+
Sbjct: 520 LSKAIQ---SKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQ 565
>gi|145335742|ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 191/412 (46%), Gaps = 21/412 (5%)
Query: 88 LGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAA 147
L S L+ W + G+ + E + +LRK R + AL++ +W++ ++F + D A
Sbjct: 140 LSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDE-NKQFEMEERDYA 198
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+LDLI+KV G E + ++P++ + VY LL +V AE + +KM+D G+
Sbjct: 199 CRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGF 258
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ + N M+ LY ++ + ++ ++ ++++ ++ ++ +Y I + + GS ME
Sbjct: 259 PLSTFTCNQMLILYKRV-DKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQ 317
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ E MK + V + + +A Y G EKAE+ L+ +E +R LLS+Y
Sbjct: 318 IVETMK-SEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVY 376
Query: 328 GSVGKKEEVYRVWNL------YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
G + +++EV RVW + Y V + G +I ++ E +FE+ L +
Sbjct: 377 GYLQREDEVRRVWKICEENPRYNEVLAAILAFG---------KIDKVKDAEAVFEKVLKM 427
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ ++++ YV + + + + G + +W+ + + ++ + +A
Sbjct: 428 SHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKA 487
Query: 442 LSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYR 493
S L A +K +P + + D+ + E ++Q GY+
Sbjct: 488 ESSLSKAIQ---SKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQ 536
>gi|449506011|ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 198/433 (45%), Gaps = 20/433 (4%)
Query: 63 VDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRY 122
+ +R P N I++ P L +S L+ W G+ L++ ++ + LRK R Y
Sbjct: 139 ISIKRAPSELLNVIWKA------PGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMY 192
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGAL 182
AL+ +W+ G + D A +LDLI K+ G+ AE++ +P + + VY L
Sbjct: 193 GKALQFSEWLEANG-KLDFVEKDYASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTL 251
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
L V A AE + +KM+D + + + N ++ LY K + +V ++ M+++ +
Sbjct: 252 LANCVIACNVQKAEEVFNKMKDLEFPITAFACNQLLLLY-KRTDKRKVADILLLMEKENV 310
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
+ ++Y I + + G ME V + MK + + + +T S +A YI G +KA+
Sbjct: 311 KPSRFTYRILIDTKGLSNDITGMEQVVDTMKAE-GIELDVSTLSVLAKHYISGGLKDKAK 369
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
L+ +E + R P LL LYG + ++EV R+W + S P + A I +
Sbjct: 370 AILKEMEEINSEGSRWPCRILLPLYGELQMEDEVRRLWEICGS-NPHIEEC--MAAIVAW 426
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN-FDKAEAFFNSIIEEGGKPN 421
++ +I+ EKIF+ + R + M++ Y ++ K + + E G + +
Sbjct: 427 GKLKNIQEAEKIFDRVVKTGEKLSARHYSTMLNVYREDSKMLTKGKEVVKQMAESGSRMD 486
Query: 422 STSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV--NVINFFKACEEESDMGS 479
+ + + + ++ + +A S F + ++ KP+ I D+ +
Sbjct: 487 PVTLDAVVKLYVEAGEVEKADS-----FLVKTVLQYKKKPMFTTYITLMDRYASRGDVPN 541
Query: 480 KEAFVALLRQPGY 492
E ++R+ GY
Sbjct: 542 AEKIFGMMRKYGY 554
>gi|414884017|tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
Length = 703
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 188/411 (45%), Gaps = 10/411 (2%)
Query: 82 LMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRL 141
++D VL+ W K G L + ++ V+ LRK R Y AL+ +W+ R +
Sbjct: 254 VLDTSMSSLMPVLDGWVKIGNRLERDKVNMVLFHLRKQRMYNKALKFVEWIERR-KLLNF 312
Query: 142 SASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK 201
D A LDLIA+ +GV +A+ + +P+ + +Y LL V AE + ++
Sbjct: 313 EERDYASHLDLIARNYGVEAAQKYIERVPEAFRSEVLYETLLVNCVCRDDAQKAEQVFNE 372
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
+R+ + N M+ LY ++ ++V +++ M+++ I+ +++Y + +
Sbjct: 373 IRELSLPLTISACNQMLLLYKRVSR-NKVVDILTLMEKENIKYSIFTYKLMIDLKVRSND 431
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
ME V MK + + PN+T + +A YI EKAEE + +E + +R
Sbjct: 432 ILGMEQVLNSMK-ENGLEPNFTIQTMVAKFYISGCFTEKAEEVINAMEVHVKA-NRHAVR 489
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
LL LY +G+ +V RVWNL P + + + A I + +++G IE E+IF+ +
Sbjct: 490 SLLDLYAILGRPVDVERVWNL--CAEPKLED--FLAAIKAWSKLGHIERAEEIFDVLVKT 545
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ N M+ Y + DK++ F + +G +W+ + + ++ + +A
Sbjct: 546 FPKLTSKYFNAMLEVYAENKLLDKSKKFIERMCLDGCTIGPLTWDAVVKLYVNLGELSKA 605
Query: 442 LSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
S L E P + + KA E+ D+ + E ++Q +
Sbjct: 606 DSFLMN--VTEDNPDRHPLFSSYVILLKAYAEKGDIHNAEKIFDRVKQTNF 654
>gi|125532536|gb|EAY79101.1| hypothetical protein OsI_34208 [Oryza sativa Indica Group]
Length = 369
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 134/257 (52%), Gaps = 9/257 (3%)
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR-DRVPYHYLLSLYGSVGKKEEVYRV 339
W +++T+ + ++ G E+A ++ + E +I + +RV Y +LL++Y +G EV R+
Sbjct: 110 TWHSYATIGKVLMQSGMEERALQAFQESEKKIAKKSNRVAYGFLLTMYADLGMNSEVDRI 169
Query: 340 WNLYRSVFPG-VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
W++Y+S P N Y IS L ++ DI G EK +EEW S +D R+ NL+++ Y
Sbjct: 170 WDVYKSKVPASACNSMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINLLLTAYC 229
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWR 458
KEG +KAEA + +++G P +W LA G+ + + +A K A A+ + W
Sbjct: 230 KEGLMEKAEALVDQFVKKGRTPFGNTWYKLAGGYFKVGQASKAADLTKKALAS-ASNEWI 288
Query: 459 PKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI------GLTDEAVAEN 512
P NV+ E+ ++ + E ++LL++ Y L+ G +
Sbjct: 289 PDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLRR 348
Query: 513 NKKNDEDSDEDSEMLLS 529
KK+ ++DE++E +L+
Sbjct: 349 MKKDGMEADEETEKILA 365
>gi|297596551|ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial [Oryza sativa Japonica Group]
Length = 426
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 179/375 (47%), Gaps = 10/375 (2%)
Query: 119 FRRYK-HALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRR 177
RRY H L++ +++ + F L D A ++DL+AKVHG+ AE + ++P + +
Sbjct: 1 LRRYLLHFLQLLEYVE-ESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEV 59
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY LL V E + +KM+D G+ V N ++ LY ++ + ++ +++ M
Sbjct: 60 VYRTLLANCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMM 118
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+++ ++ +++Y + + + G+ E ME V + M+ D + P+ +T+A YI G
Sbjct: 119 EKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGY 177
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
EKAE L ++E +R ++L LY +GKK +V R+W + V + +
Sbjct: 178 REKAEAILEQIEGDDINENRSACKFVLPLYAFLGKKADVERIWKVC-EVNARLDEC--MS 234
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
I + ++GD+E E+IFE + N M+ Y + FDK + + ++G
Sbjct: 235 AIEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDG 294
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
+ ++ ++L + + + +A S L +P + + ++ D+
Sbjct: 295 CRLGPSTLDSLVKLYSDAGEVEKADSILH---KLSYKNKIKPLYTTYLMLLDSYSKKGDV 351
Query: 478 GSKEAFVALLRQPGY 492
+ E + +RQ GY
Sbjct: 352 HNAEKLFSKVRQMGY 366
>gi|242043362|ref|XP_002459552.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
gi|241922929|gb|EER96073.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
Length = 421
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 172/377 (45%), Gaps = 10/377 (2%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD 175
LRK R Y AL+ +W++ R + D A LDL+A+ HG+ +AE + +P+ +
Sbjct: 6 LRKQRMYNKALKFMEWIDRR-KLLNFEERDYASHLDLVARNHGIEAAEKYIERVPEAFRS 64
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+Y LL V AE + +++R+ + N M+ LY ++ ++V ++
Sbjct: 65 EVLYETLLVNCVCRDDAQKAEQVFNEIRELSLPLTVSACNQMLLLYKRVSR-NKVVDILK 123
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
M+ + I+ +++Y + + G T ME V LMK + P++ + +A YI
Sbjct: 124 LMENENIKPSLFTYKLMIDLKGRSNDTLGMESVLNLMK-ENGFEPDFGIQTMVAKFYISG 182
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
EKAEE +E + +R LL LY +G+ ++V R+WNL P + + +
Sbjct: 183 DLAEKAEEVTNAMEVYVNA-NRHAIRSLLDLYAILGRPDDVERIWNLCTE--PKLED--F 237
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
A I + ++G IE E+ F+ + + N M+ Y + DK + F +
Sbjct: 238 LAAIKAWGKLGHIERAEETFDALVKTSPKLTSKYFNAMLYVYAENELLDKGKKFIERMSL 297
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEES 475
+G + +W+ + + ++ + +A S L A E P + + KA E+
Sbjct: 298 DGCPSSPLTWDAVVKLYVNSGELAKADSFL--ANVTEDNPDRYPLFRSYVILLKAFAEKG 355
Query: 476 DMGSKEAFVALLRQPGY 492
D+ + E L+Q Y
Sbjct: 356 DIHNAEKIFNRLKQTSY 372
>gi|449437710|ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
gi|449506005|ref|XP_004162626.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 606
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 199/441 (45%), Gaps = 25/441 (5%)
Query: 61 GTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFR 120
G + + KW ++ + L +S L+ W G L+ ++ + LR+ R
Sbjct: 123 GETELAEKKFTKWVPSELTKAIWNASGLSVSSALDKWVSEGNELSWDDISSTMMSLRRRR 182
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYG 180
+ AL+ +W+ G+ + +D A +LDLIAKV G+ AE + +P + + +Y
Sbjct: 183 MFGKALQFSEWLEASGQ-LEFNENDYASRLDLIAKVQGLHKAESYIAKIPKSFQGEVMYR 241
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
LL YV A AE + +KM+D + + + YN ++ LY K + ++ ++ M+++
Sbjct: 242 TLLANYVAANNVNKAEEVFNKMKDLEFPMTTFAYNQVLVLY-KRNDRRKIADVLLLMEKE 300
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
++ ++Y I + + G ME V + MK + + + +A Y+ G +K
Sbjct: 301 NVKPSPFTYKILIDAKGLSKDISGMEQVVDTMKAE-GIELDVFALCLLAKHYVSCGLKDK 359
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A+ +L+ +E + R P LL LYG + ++EV R+W + + P + A I
Sbjct: 360 AKATLKEMEEINSKGSRWPCRLLLPLYGELEMEDEVRRLWEICEAN-PHIEEC--MAAIV 416
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIAN----LMMSWYVKEGNFDKAEAFFNSIIEE 416
+ ++ +I EKIF++ VK+ +I+ M+ Y K + N + E
Sbjct: 417 AWGKLKNIHEAEKIFDK--VVKTWPKKKISTKHYCTMIKVYGDCKMLTKGKELVNQMAES 474
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV-----NVINFFKAC 471
G + +W+ + + ++ + +A F + K + +P+ ++N +
Sbjct: 475 GYSIDPLAWDAVVKLYVEAGEVEKA-----DTFLVKAVKKYEMRPLYCSYRTLMNHYA-- 527
Query: 472 EEESDMGSKEAFVALLRQPGY 492
D+ + E +RQ GY
Sbjct: 528 -RRGDVHNAEKIFYKMRQSGY 547
>gi|125599572|gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
Length = 610
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 183/413 (44%), Gaps = 11/413 (2%)
Query: 82 LMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRL 141
++D P VL+ W + G L + + V+ L+K Y+ AL+ +WM RG+
Sbjct: 152 VLDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRKALQFVEWME-RGKLLNF 210
Query: 142 SASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK 201
D A LDLIA+ HG+ +A+ + +P ++ +Y L+ V A AE + +
Sbjct: 211 EKRDYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQKAEEVFKE 270
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
++D + N M+ LY +I +V S++ M+++ ++ ++Y + + G
Sbjct: 271 IKDLCLRLTVTLCNQMILLYKRIAP-GKVASVLMLMEKENVKPSAFTYRLLIDLKGRSND 329
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD--RVP 319
+E V MK + P+ +T + +A YI G EKAE ++ +E++++ R
Sbjct: 330 LAGIEVVLNEMKA-YGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHV 388
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
LL LY ++ K +V R+W + P + + + + I + +G IE E+ FE
Sbjct: 389 IKSLLHLYAALNKPNDVARIWEMCTE--PMLED--FLSAIKAWGELGLIEKAEETFEAMA 444
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+ + N M++ Y + K + F + +G +W+ L ++ +
Sbjct: 445 NAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALINLYVNSGEVE 504
Query: 440 EALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+A S L AE +P + K + D+ + E L+ GY
Sbjct: 505 KADSFLLN--VAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGY 555
>gi|125557709|gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
Length = 610
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 183/413 (44%), Gaps = 11/413 (2%)
Query: 82 LMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRL 141
++D P VL+ W + G L + + V+ L+K Y+ AL+ +WM RG+
Sbjct: 152 VLDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRKALQFVEWME-RGKLLNF 210
Query: 142 SASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK 201
D A LDLIA+ HG+ +A+ + +P ++ +Y L+ V A AE + +
Sbjct: 211 EKRDYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQKAEEVFKE 270
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
++D + N M+ LY +I +V S++ M+++ ++ ++Y + + G
Sbjct: 271 IKDLCLRLTVTLCNQMILLYKRIAP-GKVASVLMLMEKENVKPSAFTYRLLIDLKGRSND 329
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD--RVP 319
+E V MK + P+ +T + +A YI G EKAE ++ +E++++ R
Sbjct: 330 LAGIEVVINEMKA-YGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHV 388
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
LL LY ++ K +V R+W + P + + + + I + +G IE E+ FE
Sbjct: 389 IKSLLHLYAALNKPNDVARIWEMCTE--PMLED--FLSAIKAWGELGLIEKAEETFEAMA 444
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+ + N M++ Y + K + F + +G +W+ L ++ +
Sbjct: 445 NAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALINLYVNSGEVE 504
Query: 440 EALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+A S L AE +P + K + D+ + E L+ GY
Sbjct: 505 KADSFLLN--VAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGY 555
>gi|307136024|gb|ADN33878.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 470
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 158/332 (47%), Gaps = 7/332 (2%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P L S L+ W G+ L++ ++ + LR+ R + AL+ +W+ G+ ++ D
Sbjct: 141 PGLSVPSALDKWVSEGKELSRADISLTMLYLRRRRMFGKALKFSEWLEANGKL--VTDRD 198
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A QLDLI K+ G+ AE++ +P + + VY LL V + AE + +KM+D
Sbjct: 199 YASQLDLIGKLRGLRMAENYISKIPKSFQGEVVYRTLLANCVMSTNVRKAEEVFNKMKDL 258
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ + + N ++ LY K + ++ ++ M+++ ++ ++Y I + + G M
Sbjct: 259 EFPITAFACNQLLLLY-KRTDKKKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDISGM 317
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E V + MK + + T +A Y+ G +KA+ +L+ E + R P +LL
Sbjct: 318 EQVVDTMKAE-GIKLGVGTLLLLAKHYVSAGLKDKAKATLKETEEINSKGSRRPCRFLLP 376
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
LYG + ++EV R+W + S P V A I + ++ +++ EKIF+ +
Sbjct: 377 LYGELQMEDEVRRLWEICES-NPHVEEC--MAAIVAWGKLKNVQEAEKIFDRVVKTGKKL 433
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
R + MM+ Y K + N + E G
Sbjct: 434 STRHYSTMMNVYRDSKMLTKGKELVNQMAESG 465
>gi|449506007|ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 179/395 (45%), Gaps = 6/395 (1%)
Query: 61 GTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFR 120
G + + KW ++ + P AS L W G L++ ++ + LR+ +
Sbjct: 129 GETELAEKKFTKWVPSKLTKAIWNAPDFSVASALVKWVSQGNKLSRDDISSTMISLRRRQ 188
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYG 180
++ AL+ +W+ G+ + D A ++ LIAKV G+ AE + +P + + V+
Sbjct: 189 MFRKALQFSEWLEANGQ-LEFNERDYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHR 247
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
ALL YV A AE + +K++D + + YN M+ LY KI + ++ ++ M+++
Sbjct: 248 ALLANYVVANNVEKAEEVFNKIKDLEFPMSIFAYNQMLVLYKKI-DRRKIADVLLLMEKE 306
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
I+ ++Y I + G ME V + MK + + + +T S +A Y+ G K
Sbjct: 307 NIKPCPFTYKILIDGKGLSNDISGMEQVVDSMKAE-GIELDVSTLSLLAKHYVSCGLKVK 365
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A+ L+ +E + + LL YG + ++EV R+W + + P + A I
Sbjct: 366 AKAILKEIEETNSNGPQWLCRILLPFYGKLQMEDEVRRLWEICEA-NPHIEEC--MAAIV 422
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
+ ++ +++ EKIF+ + R ++MM+ Y K + N + E G
Sbjct: 423 AWGQLKNVQEAEKIFDRVVKTWKKLSARHYSIMMNVYRDSKMLTKGKEVVNQMAESGCHI 482
Query: 421 NSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
+ + + + ++ + +A S L A G K
Sbjct: 483 DLLTCNAIVKLYVEAGEVEKADSFLVKAVKKYGMK 517
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 14/177 (7%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AE + D++ + + Y++MM +Y K + + +V++M E G +D+ + N +
Sbjct: 433 AEKIFDRVVKTWKKLSARHYSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVK 492
Query: 255 SCGSQGSTEKMEGVFELMKVDK-AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
G EK + F + V K + P +T++ T+ Y + G V AE ++ ++
Sbjct: 493 LYVEAGEVEKADS-FLVKAVKKYGMKPLFTSYKTLMDHYARRGDVHNAE----KIFDKMR 547
Query: 314 GRDRVP----YHYLLSLYGSVGKKEEVY--RVWNLYRSVFPGVTNLGYHAMISSLAR 364
+P + L+ Y V K Y R + VFP T G A + S +
Sbjct: 548 QSSYIPRLGQFGTLIQAY--VNAKTPAYGMRERMMADKVFPNKTLAGQLAQVDSFRK 602
>gi|449437712|ref|XP_004136635.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 194/433 (44%), Gaps = 20/433 (4%)
Query: 63 VDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRY 122
+ +R P N I++ P L +S L+ W G+ L++ ++ + LRK R Y
Sbjct: 131 ISIKRAPSELLNVIWKA------PGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMY 184
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGAL 182
AL+ +W+ G + D A +LDLI K+ G+ AE++ +P + + VY L
Sbjct: 185 GKALQFSEWLEANG-KLDFVEKDYASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYQTL 243
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
L V A AE + +KM++ + + + N ++ LY K + ++ ++ MK++ +
Sbjct: 244 LVNCVIASNVHKAEKVFNKMKNLEFPITAFACNQLLLLY-KRTDKRKIADVLLLMKKENV 302
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
+ +Y I + G ME V + MK + + + T S + Y+ G +KA+
Sbjct: 303 KYSTSTYRILIDVNGLSNDITGMEEVVDSMKAE-GIKLDVETLSRLVKHYVSGGLKDKAK 361
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
L+ +E + R P LL LYG + ++EV R+W + S P + A I +
Sbjct: 362 AILKEMEEINSEGSRWPCRILLPLYGELQMEDEVRRLWEICGS-NPHIEEC--MAAIVAW 418
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN-FDKAEAFFNSIIEEGGKPN 421
++ +I+ EKIF+ + R + M++ Y ++ K + + E G + +
Sbjct: 419 GKLKNIQEAEKIFDRVVKTGEKLSARHYSTMLNVYREDSKMLTKGKEVVKQMAESGSRMD 478
Query: 422 STSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV--NVINFFKACEEESDMGS 479
+ + + + ++ + +A S F + ++ KP+ I D+ +
Sbjct: 479 PVTLDAVVKLYVEAGEVEKADS-----FLVKTVLQYKKKPMFTTYITLMDRYASRGDVPN 533
Query: 480 KEAFVALLRQPGY 492
E ++R+ GY
Sbjct: 534 AEKIFGMMRKYGY 546
>gi|357439973|ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479312|gb|AES60515.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 557
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 182/405 (44%), Gaps = 10/405 (2%)
Query: 88 LGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAA 147
L S L+ W + G+ L++ E+ + LR+ + Y AL+ DW+ + ++ + + A
Sbjct: 104 LSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLES-NKKLEFTEKEYA 162
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+LDLIAK+ G+ AE + +P++ + +Y LL E +KMR+ G+
Sbjct: 163 SKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGF 222
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
V + N ++ +Y KI + + ++ M+++ ++ Y+Y I + G + M
Sbjct: 223 PVTAFACNQLLLIYKKIDKKKIADVLLM-MEKENVKPSSYTYKILIDVKGLSNDIDGMSQ 281
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ E MK + + T +++A Y G EK E L+ +E + LL LY
Sbjct: 282 IVETMKAE-GCELDHLTRASLARHYAAAGLTEKTEAILKEIEGENLKENMWVCPTLLRLY 340
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
+G+ +EV R+W + S P V + A I + R+ IE E +F E +S K
Sbjct: 341 AILGRADEVERIWKVCESK-PRVEDC--LAAIEAWGRLKKIEEAEAVF-EMMSNKWKLTA 396
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKG 447
R ++ Y++ +K + ++ + G T+W+ L +++ + +A + L+
Sbjct: 397 RNYESLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYVQAGEVEKADTVLQK 456
Query: 448 AFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
A K P + + + D+ + E LRQ Y
Sbjct: 457 ALQQNKMK---PMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQANY 498
>gi|357439923|ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479287|gb|AES60490.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 182/405 (44%), Gaps = 10/405 (2%)
Query: 88 LGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAA 147
L S L+ W + G+ L++ E+ + LR+ + Y AL+ DW+ + ++ + + A
Sbjct: 153 LSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLES-NKKLEFTEKEYA 211
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+LDLIAK+ G+ AE + +P++ + +Y LL E +KMR+ G+
Sbjct: 212 SKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGF 271
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
V + N ++ +Y KI + + ++ M+++ ++ Y+Y I + G + M
Sbjct: 272 PVTAFACNQLLLIYKKIDKKKIADVLLM-MEKENVKPSSYTYKILIDVKGLSNDIDGMSQ 330
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ E MK + + T +++A Y G EK E L+ +E + LL LY
Sbjct: 331 IVETMKAE-GCELDHLTRASLARHYAAAGLTEKTEAILKEIEGENLKENMWVCPTLLRLY 389
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
+G+ +EV R+W + S P V + A I + R+ IE E +F E +S K
Sbjct: 390 AILGRADEVERIWKVCESK-PRVEDC--LAAIEAWGRLKKIEEAEAVF-EMMSNKWKLTA 445
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKG 447
R ++ Y++ +K + ++ + G T+W+ L +++ + +A + L+
Sbjct: 446 RNYESLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYVQAGEVEKADTVLQK 505
Query: 448 AFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
A K P + + + D+ + E LRQ Y
Sbjct: 506 ALQQNKMK---PMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQANY 547
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 173/362 (47%), Gaps = 12/362 (3%)
Query: 90 SASV---LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
SASV + W GR++ + + V LR+ R ++ AL+V +W+ R ++LS D
Sbjct: 61 SASVCAAIRGWMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIM-RERPYKLSELDY 119
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+ L+ AKVHG++ AE FL +P ++ +Y L+ A + + A KMR+
Sbjct: 120 SYLLEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELS 179
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
+ YN ++ L+ + ++++MK + +YNI L ++ + + +
Sbjct: 180 LPISPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVA 239
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
VF MK K V PN T+ +A + + + +E+ +TG + LL L
Sbjct: 240 RVFNDMKRAK-VEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWSTLEILLIL 298
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
YG GK +E+ W+L + + P + + I + ++G I+ E+I W +S+
Sbjct: 299 YGYHGKAKELKMTWDLMQGL-PHIRPKSFILAIEAFGKVGSIDQAEEI---WGKFESTRK 354
Query: 387 PRIA---NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
P++ N ++S Y + G DKA A F + G +PN+ ++ L G ++ + EAL
Sbjct: 355 PKLTEQFNSILSVYCRHGLVDKASAVFKEMRANGCQPNAITYRHLTLGCLKAGIVKEALK 414
Query: 444 CL 445
+
Sbjct: 415 TM 416
>gi|125575301|gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 191/434 (44%), Gaps = 75/434 (17%)
Query: 102 RSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS 161
R + K E+ ++K L + RR+ AL++ WM R LS D A +L+LI KV+G+
Sbjct: 32 RHVAKPEVQSIIKYLCRRRRFSQALQLSMWMTER-LHLHLSPGDVANRLELITKVYGLDR 90
Query: 162 AEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY 221
A ++F S+PD LK ++ YG+ ++ Y
Sbjct: 91 AVEYFDSMPDQLKQQQCYGS-----------------------------------LLKCY 115
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
+ ++ E + +M+ G+ Y+YN+ + G E++ + + M+ + + P+
Sbjct: 116 AEANCVEKAEELFEKMRGMGMA-SSYAYNVMMRLYLQNGQVERVHSMHQAME-ESGIVPD 173
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
+T T+ + LR+ ++ + Y+++ E++ + N
Sbjct: 174 VSTTHTLVAV-------------LRKKKTLVAA-------YVVA--------EDIKAIEN 205
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ N Y I L ++ D+ G EK +EEW S +D R+ NL++ Y KEG
Sbjct: 206 VLEKA--NSCNSMYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEG 263
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKP 461
DKAEA + I++G P + + LA G+ + ++ +A K A A+ + W P
Sbjct: 264 LMDKAEALVDQFIKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALAS-ASNEWIPDL 322
Query: 462 VNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI------GLTDEAVAENNKK 515
NV+ E+ ++ + E ++LL++ Y L+ G + KK
Sbjct: 323 TNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKK 382
Query: 516 NDEDSDEDSEMLLS 529
+ ++DE++E +L+
Sbjct: 383 DGMEADEETEKILA 396
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 185/431 (42%), Gaps = 33/431 (7%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALE---------------------VY 129
S L W G + ++ + LRK R K ALE +
Sbjct: 82 GSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALEMSNLGMLLDRNEFLLMKILLNLM 141
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRA 189
+W+ R +RL + + L+ K+HGV+ E F +P ++ +Y L+ A +
Sbjct: 142 EWII-RERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQ 200
Query: 190 RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSY 249
+ A + KMR+ GY L YN ++ + ++ MK V +Y
Sbjct: 201 GVIRLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTY 260
Query: 250 NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
+I + ++ + + + F+ MK V PN ++ +A + AE +E
Sbjct: 261 HILMKLEANEHNIDGVLKAFDGMK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIE 319
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
ITG + L+ LYG +GK++E+ R WN+ R F V + Y + AR+G+++
Sbjct: 320 KSITGDNWSTLDILMILYGRLGKEKELARTWNVIRG-FHHVRSKSYLLATEAFARVGNLD 378
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
E+++ E +VK + N ++S Y K+G +KA F + G KPNS ++ LA
Sbjct: 379 RAEELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLA 438
Query: 430 EGHIRERRILEALSCLKGAFAAEGAKS------WRPKPVNVINFFKACEEESDMGSKEAF 483
G + + + EAL ++ + +KS W +++I F E+ D+ + E
Sbjct: 439 LGCAKAKLMKEALKNIEMGLNLKTSKSIGSSTPWLETTLSIIECFA---EKGDVENSEKL 495
Query: 484 VALLRQPGYRK 494
++ Y +
Sbjct: 496 FEEVKNAKYNR 506
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 35/222 (15%)
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKE-KGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
V S Y + + ++ D E + EMK KG++ + +N LS G EK G
Sbjct: 359 VRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLK-ETEQFNSLLSVYCKDGLIEKAIG 417
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
VF M PN T+ +A + + + +E+L+ +E + L
Sbjct: 418 VFREM-TGNGFKPNSITYRHLA---LGCAKAKLMKEALKNIEMGLN----------LKTS 463
Query: 328 GSVGKKEEVYRVWNLYRSVFPGV-TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
S+G S P + T L ++I A GD+E EK+FEE + K +
Sbjct: 464 KSIG-------------SSTPWLETTL---SIIECFAEKGDVENSEKLFEEVKNAKYNRY 507
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ N + YVK +D F ++ G +P++ S+ L
Sbjct: 508 AFVYNALFKAYVKAKVYD--PNLFKRMVLGGARPDAESYSLL 547
>gi|357509403|ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 190/412 (46%), Gaps = 11/412 (2%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
+ L W + G+ L++ E+ + LR+ + Y AL++ +W+ ++ + D A QLD
Sbjct: 174 TALEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESK-KHLEFVERDYASQLD 232
Query: 152 LIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
LIAK+HG+ AE + +P++ + +Y LL V AE + +KM+D + +
Sbjct: 233 LIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEFPLTP 292
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
N ++ LY K + ++ ++ M+++ ++ ++ I + G + M+ + +
Sbjct: 293 FACNQLLLLY-KRTDKKKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDIDGMDQIVDQ 351
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M+ + + P+ T + + YI G +KA+ L+ +E +R LL+LY +G
Sbjct: 352 MRAE-GIEPDNYTKAVLVGHYISGGHDDKAKMLLKEMEGENLKENRWVCRLLLALYAKLG 410
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
+EV RVW + + P V + A I + ++ I+ E +F E ++ K + +
Sbjct: 411 MADEVGRVWKVCET-RPSVEDC--VAAIEAWGKLKKIDEAEAVF-EVMARKWKLTSKNCS 466
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
++++ Y K + + +G + +W L + +++ + +A S L+ A
Sbjct: 467 VLLNVYANNKMLTKGKDLIKRMAHKGCRIGPLTWNALVKLYVQAGEVEKADSVLQKAIQQ 526
Query: 452 EGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY-RKEKDYMSLI 502
RP + + + D+ + E ++Q GY + K Y LI
Sbjct: 527 SPV---RPIFSSYNTLLEEYSKRGDIHNSEKIFYRMKQAGYISRLKQYQILI 575
>gi|297729251|ref|NP_001176989.1| Os12g0531500 [Oryza sativa Japonica Group]
gi|255670362|dbj|BAH95717.1| Os12g0531500 [Oryza sativa Japonica Group]
Length = 352
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
S+ + + RVW R F ++ Y M++SL R GDI E + EW S + D R
Sbjct: 133 SLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDSR 192
Query: 389 IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGA 448
I N ++++Y+K G +KAE F + I+++G KP+ ++WE G++ + R+ + L CLK A
Sbjct: 193 IPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECLKKA 252
Query: 449 FAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
+ + W P P + EE+ D+ + E + + R+ GY + Y S++
Sbjct: 253 LSC--LEKWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYVTTEIYNSVL 304
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 2/145 (1%)
Query: 192 RGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
RGN + + KMR+ Y M+T + + E ES SE + D N
Sbjct: 137 RGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDSRIPNT 196
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
L+ G EK EG + + V K V P+++T+ Y+ G+++K E L++ S
Sbjct: 197 ILAFYIKNGMMEKAEGFLDHI-VQKGVKPSYSTWELFVWGYLSDGRMDKVLECLKKALSC 255
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEV 336
+ D P ++Y + +K ++
Sbjct: 256 LEKWDPNP-QLATAIYSQIEEKGDI 279
>gi|224125312|ref|XP_002329774.1| predicted protein [Populus trichocarpa]
gi|222870836|gb|EEF07967.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
++P LK VY ALLN Y R + A K+ D G L +N++M LY +
Sbjct: 21 AIPQKLKGFMVYTALLNCYAREKDVEKAVATFKKLTDIGVMRSPLVFNILMYLYFQ---- 76
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
D V +W T+
Sbjct: 77 ----------------------------------------------TDGEVVGDWNTYCV 90
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDR-VPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
A +K G +E A L+++E +IT + + + + LL LY G K+E+YR+W
Sbjct: 91 AADRCLKAGIMEMAMTMLKKLEGQITEKTKSIAFDTLLKLYARKGNKDELYRIWK-SDEK 149
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
+ N GY +MISSL + DIE E +F++W S SY R+ N++++ Y + +KA
Sbjct: 150 RDKIYNKGYMSMISSLLMLDDIEAAEMMFKKWESRGLSYYFRVPNILINAYCRNNLLEKA 209
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVIN 466
+ + + +G +P++ +W +LA G++ + +A+ G W+P + +
Sbjct: 210 GSLIDHAMMKGSEPSADAWYSLASGYLEVEAMKKAILVCPG---------WKPIKETLAS 260
Query: 467 FFKACEEESDMGSKEAFVALLR 488
E + D E F+ LLR
Sbjct: 261 CLDHLEGKGDQNKAEEFIELLR 282
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 176/377 (46%), Gaps = 13/377 (3%)
Query: 76 IFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNR 135
+ RK+ ++ N + S SVL E +L+ EL ++K L + ++ ALEV++WM +
Sbjct: 20 LLRKIVVLPNDECVS-SVLTTSEP---NLSSSELLSIMKGLGREGQWNKALEVFNWM-RQ 74
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRG 193
FR A+ L ++ + + + F SL + D Y +L++A R R
Sbjct: 75 SVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFK 134
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLY-MKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
A ++M++ G + YNV++ LY K + ++ + + EMK +GI+ D Y+YN
Sbjct: 135 EALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTA 194
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+++C S E+ +F MK P+ T++ + +Y K G +A L+ +ES
Sbjct: 195 ITACASGSLCEEATELFTQMKSSNCT-PDRVTYNALLDVYGKAGWYNEAANVLKEMESAG 253
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEG 370
+ V Y+ LLS +G G + + + + + P V Y +++S+ +R G +E
Sbjct: 254 CLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDV--FTYTSLLSAYSRAGKVEQ 311
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+I+ + + + + N ++ + K NF + F + G +P+ +W +L
Sbjct: 312 AMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLG 371
Query: 431 GHIRERRILEALSCLKG 447
+ E L +G
Sbjct: 372 AFGKNGMYSEVLKVFRG 388
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 133/318 (41%), Gaps = 5/318 (1%)
Query: 117 RKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLK 174
+K R +++ LE+++ M +G + + AI A A + F + +
Sbjct: 164 KKGRSWENILELFEEMKAQGIQPDEYTYNTAITA--CASGSLCEEATELFTQMKSSNCTP 221
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR Y ALL+ Y +A A ++ +M G + + YN +++ + + + M
Sbjct: 222 DRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMK 281
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M KGI DV++Y LS+ G E+ ++ M+ PN TF+ + M+ K
Sbjct: 282 DSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCT-PNSFTFNALIGMHGK 340
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+ +++ D V ++ LL +G G EV +V+ +
Sbjct: 341 NKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKAT 400
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +I + R G + I++ L + D N +++ +EG ++ AE + +
Sbjct: 401 FNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELN 460
Query: 415 EEGGKPNSTSWETLAEGH 432
KPN ++ ++ +
Sbjct: 461 RSSYKPNDIAYASMLHAY 478
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 149/338 (44%), Gaps = 27/338 (7%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL------KD 175
Y L+V+ M G D A +++ + +G + D LS+ D + D
Sbjct: 379 YSEVLKVFRGMKKAGFE-----PDKAT-FNILIEAYGRCGSSDQALSIYDGMLQAGCTPD 432
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ LL A R +AEL++D++ Y + + Y M+ Y E ++++ MV
Sbjct: 433 LATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVD 492
Query: 236 EMKEKGI---RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ + ++ + ++ + S C ++ E F M+ ++ + +TF+ M +MY
Sbjct: 493 TLHTIYVPFTKILLKTFVLVYSKCSL---VDEAEDAFLAMRHHGYLS-DTSTFNAMISMY 548
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW--NLYRSVFPGV 350
K G ++KA ++ + S D V Y+ L+ +YG +E +YR L + G
Sbjct: 549 GKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYG----REGMYRKCEATLRECMAAGQ 604
Query: 351 TN--LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
T + Y+ +I S ++ G + +IF E +S D N + YV G F +A +
Sbjct: 605 TPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALS 664
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ + G KP+ ++ TL + + + + E LK
Sbjct: 665 VVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILK 702
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 6/218 (2%)
Query: 154 AKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
+K V AED FL++ L D + A+++ Y + M A +R G
Sbjct: 514 SKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDV 573
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
+ YN +M +Y + Y + E+ + E G D+ SYN + S G +F
Sbjct: 574 VTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHE 633
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M V + P+ T++T Y+ G +A ++ + D V Y L+ Y +G
Sbjct: 634 M-VSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIG 692
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
K EEV R+ +S P + Y + AR+ D +
Sbjct: 693 KFEEVERILKFIKSSDPNFSKAAYRRIA---ARVDDYD 727
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 124/311 (39%), Gaps = 34/311 (10%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +LL+AY RA A + ++MR +S +N ++ ++ K K + E+ +
Sbjct: 292 DVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIF 351
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-----VDKAV----------- 278
+M+ G+ D+ ++N L + G G ++ VF MK DKA
Sbjct: 352 EDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRC 411
Query: 279 ------------------NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
P+ TF+T+ + G+ E AE L + + + Y
Sbjct: 412 GSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAY 471
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
+L Y + G+ E++ + + +++ T + + ++ ++ E F
Sbjct: 472 ASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRH 531
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
D N M+S Y K+G DKA F + G +P+ ++ L + RE +
Sbjct: 532 HGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRK 591
Query: 441 ALSCLKGAFAA 451
+ L+ AA
Sbjct: 592 CEATLRECMAA 602
>gi|449479164|ref|XP_004155523.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 201
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 90/150 (60%), Gaps = 6/150 (4%)
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
++LY ++G K+EVYRVWNLY ++ N GY +ISSL ++ DI+G E+I +EW S +
Sbjct: 1 MTLYAAIGNKDEVYRVWNLYTNLQKRF-NSGYLCIISSLMKLDDIDGAERILKEWESGDT 59
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
S+D +I N+M++ Y +G DKAEA+ + +IE G +P + +W+ LA G+ +A
Sbjct: 60 SFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASGYHSNGLTNKAAE 119
Query: 444 CLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
LK A + + W+P + AC E
Sbjct: 120 TLKKAISVSPPR-WKPN----YDILAACLE 144
>gi|356503391|ref|XP_003520493.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80270, mitochondrial-like [Glycine max]
Length = 580
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 189/416 (45%), Gaps = 30/416 (7%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
VL W + G LT+ RK + + AL + +W+ ++ E F D A +LDL
Sbjct: 141 VLEKWLEEGNELTR---------XRKRKLFGRALLLSEWLESKKE-FEFIERDYASRLDL 190
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
IAK+ G+ AE + ++P++ +Y LL V AE + KM+D +
Sbjct: 191 IAKLRGLHKAEVYIETIPESCSREIMYRTLLANCVSQNNVKKAEEVFSKMKDLDLPITVF 250
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
N ++ LY K + ++ ++ M+ + I+ +SY+I + + G M+ + + M
Sbjct: 251 TCNELLFLY-KRNDKKKIADLLLLMENEKIKPSRHSYSILIDTKGQSKDIGGMDQIVDRM 309
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
K + + P+ T + +A YI G +K E L+++E ++R LL LY ++GK
Sbjct: 310 KA-QGIEPDINTQAVLARHYISAGLQDKVETLLKQMEGENLKQNRWLCRILLPLYANLGK 368
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSL---ARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+EV R+W + TN Y + ++ ++ I+ EK+F E + K +
Sbjct: 369 VDEVGRIWKVCE------TNPRYDECLGAIEAWGKLNKIDEAEKVF-EMMVKKWKLSSKT 421
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAF 449
++++ Y K + I + G + +W+T+ + +++ + +A S L+ A
Sbjct: 422 CSILLKVYANNEMLMKGKDLMKRIGDGGCRIGPLTWDTIVKLYVQTGEVEKADSVLQKA- 480
Query: 450 AAEGAKSWRPKPV--NVINFFKACEEESDMGSKEAFVALLRQPGY-RKEKDYMSLI 502
A+ + KP+ + + + D+ + E ++Q Y K K Y L+
Sbjct: 481 ----AQQSQMKPMFSTYLTILEQYAKRGDIHNSEKIFLRMKQADYTSKAKMYQVLM 532
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 164/354 (46%), Gaps = 9/354 (2%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
A VL+D + +T +LC VVK + + + ALEVY+W+N R + +A + L
Sbjct: 173 ADVLDDRKV---QMTPTDLCFVVKSVGQ-ESWHRALEVYEWLNLR-HWYSPNARMLSTIL 227
Query: 151 DLIAKVHGVASAEDFFL-SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
++ K + A A + F+ + P +VY A++ Y R + L+D MR++G
Sbjct: 228 SVLGKANQEALAVEVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKP 287
Query: 210 HSLPYNVMMTLYMKIKEY--DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ +N ++ +K + +++E++ G+R D +YN +S+C + E+
Sbjct: 288 DLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAK 347
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
VF+ M+ P+ T++ M ++Y + G KAE+ +ESR D V Y+ LL +
Sbjct: 348 VFDDMEAHHC-QPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAF 406
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
G E+V +W + G + Y+ MI + G E +++ + S + D
Sbjct: 407 AREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDA 466
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+++ K +A + ++ G KP ++ L G+ + + +EA
Sbjct: 467 VTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEA 520
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 146/348 (41%), Gaps = 22/348 (6%)
Query: 139 FRLSASDAAIQLDLIAKV----------HGVASAEDFFLSLPDTLKDRRVYGALLNAYVR 188
F++S S + LD A+ HG+ +A F T+ RV LL+ R
Sbjct: 879 FKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYF-----PTMHLYRVMARLLS---R 930
Query: 189 ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYS 248
+ + E ++ +M + G+ +N ++ +Y+ I+++ + + +KE G+ D +
Sbjct: 931 GKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDT 990
Query: 249 YNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
YN + E+ + M+V + P T+ ++ + K VE+AEE +
Sbjct: 991 YNTLIVMYCRDHRPEEGFSLMHEMRV-AGLEPKLDTYKSLVASFGKQQLVEQAEELFEEL 1049
Query: 309 ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDI 368
+S+ DR YH ++ +Y + G + R++++ + T H ++ S G
Sbjct: 1050 QSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQP 1109
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ EK+ S+ + ++ Y++ G+++ + +EG +P+ W
Sbjct: 1110 QEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTCF 1169
Query: 429 AEGHIRERRILEA---LSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
RR EA L+ L+ A + KP ++++ C E
Sbjct: 1170 IRAASLSRRTSEAIVLLNALQDAGFDLPIRLLTEKPESLVSALDRCLE 1217
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 113/288 (39%), Gaps = 34/288 (11%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR+V+ AL+ AY + A + + M G + N ++ + DE+ +V
Sbjct: 812 DRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVV 871
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV-------------------- 274
E+++ G ++ S + L + G+ +++ ++ MK
Sbjct: 872 QELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRG 931
Query: 275 --------------DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
+ P+ + ++++ MY+ + K + +R++ D Y
Sbjct: 932 KQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTY 991
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
+ L+ +Y + EE + + + R Y ++++S + +E E++FEE S
Sbjct: 992 NTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQS 1051
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
D + MM Y G+ KAE F+ + + G +P + L
Sbjct: 1052 KGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLL 1099
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 93/219 (42%), Gaps = 5/219 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A+++ Y R + G AE L + + +G+ ++ YN ++ + + ++V+ + EM
Sbjct: 363 TYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEM 422
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G D +YN + G QG E ++ M+ NP+ T++ + K +
Sbjct: 423 VKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQ-SSGRNPDAVTYTVLIDSLGKTNK 481
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+ +A + + + Y L+ Y GK E ++ L + P +L Y
Sbjct: 482 IAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPD--HLAY 539
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
M+ R + + +++E L + D + LM+
Sbjct: 540 SVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELML 578
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 9/251 (3%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGAL 182
AL++Y M + G A + +D + K + +A A + +T + Y AL
Sbjct: 450 ALQLYRDMQSSGRN--PDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSAL 507
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
+ Y +A AE D M G L Y+VM+ ++++ E ++ EM GI
Sbjct: 508 ICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGI 567
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
LD Y + L + E + V M+ +N T++++ +K ++A
Sbjct: 568 TLDHSLYELMLRTLRKVNKVEDIGRVIRDMEEICGMNTQ-----TISSILVKGECYDEAA 622
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
+ LRR S DR +LS Y S G+ E + + P + + A++ L
Sbjct: 623 KMLRRAISDHFEIDRENLLSILSSYSSSGRHAEALDLLEFLKEHSPRSSQMITEALVVML 682
Query: 363 ARIGDIEGMEK 373
+ ++ K
Sbjct: 683 CKAQQLDAALK 693
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRD---KGYAVHSLPYNVMMTLYMKIKEYDEV 230
KD Y +++ Y + +G EL + RD G ++ Y V++ K + E
Sbjct: 429 KDEMTYNTMIHMYGK---QGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEA 485
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++SEM G++ + +Y+ + G + E F+ M + + P+ +S M
Sbjct: 486 AGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCM-LRSGIRPDHLAYSVMLD 544
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
++++ + ++A + + D Y +L V K E++ RV
Sbjct: 545 IHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRV 593
>gi|15229739|ref|NP_187745.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322901|gb|AAG51439.1|AC008153_12 hypothetical protein; 6614-8314 [Arabidopsis thaliana]
gi|332641514|gb|AEE75035.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 541
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 144/311 (46%), Gaps = 46/311 (14%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+V++LR R + ALEV DWM + + + L D + + L KV + AE FF S+P+
Sbjct: 81 IVEKLRSSNRPRQALEVSDWMVEQ-KMYNL-PEDFSARFHLTEKVLNLEEAEKFFESIPE 138
Query: 172 TLKDRRVYGALLNAYVRA---RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
++ +Y +LL +Y R + AE + KM+ G + PYN M +LY + D
Sbjct: 139 NMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRD 198
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF----ELMKVDKAVNPNWTT 284
+V+ ++ EMKE + LD + N L + M+ E+ ++D T
Sbjct: 199 KVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLADRKEITRLD------GLT 252
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
MA Y L+SLYG G+ E+V+RVW+ Y+
Sbjct: 253 MLAMAKAY-----------------------------ELMSLYGEAGEIEDVHRVWDKYK 283
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKI-FEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+ N + +I SL ++GD +G EKI + EW +D RI ++++S Y ++G
Sbjct: 284 ATRQK-DNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMV 342
Query: 404 DKAEAFFNSII 414
KA+ N +
Sbjct: 343 MKADKLVNKTL 353
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L + +K G ++ L ++K LR + ALE WM + + F L + D A +L L
Sbjct: 365 LLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQK-KVFNLFSEDYATRLHL 423
Query: 153 IAKVHGVASAEDFF-LSLPDTLKDRRVYGALLNAYVRA-RMRGNAELLIDKMRDKGYAVH 210
KV G+ AE+FF S+P+ +KD VY LL+ Y R+ + AE + +KMR+ G
Sbjct: 424 TEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSK 483
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
P+N +++LY + V ++ +MK K I D+ + N L + + + ME V
Sbjct: 484 LSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEKV 541
>gi|186478941|ref|NP_174121.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332192779|gb|AEE30900.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 388
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 131/259 (50%), Gaps = 8/259 (3%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
L++W K G+ L L ++ L + +R+ HAL+V +W+ RG F LS D A +L L+
Sbjct: 53 LDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRG-IFDLSTEDFASRLCLV 111
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAY-VRARMRGNAELLIDKMRDKGYAVHSL 212
G+ AE FF S+P+ ++D V+ LL+ Y + + R AE MR + +
Sbjct: 112 EISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTMRVQNMLLKPY 171
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV-YSYNIWLSSCGSQGSTEKMEGVFEL 271
PY M+ LY + E + ++ ++ +MKE G+ D + N L + S E ME
Sbjct: 172 PYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPDVEAMEMFLMG 231
Query: 272 MKVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH-YLLSLYGS 329
++V++ + W T ++A Y+K G KA E LRR E + + + + L+ +Y
Sbjct: 232 LEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKDSANKVLMMMYWD 291
Query: 330 VGKKEEVYRVWNLYRSVFP 348
G K++ R L R ++P
Sbjct: 292 AGAKQDASR---LSRLIYP 307
>gi|12322983|gb|AAG51473.1|AC069471_4 hypothetical protein [Arabidopsis thaliana]
Length = 349
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 131/259 (50%), Gaps = 8/259 (3%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
L++W K G+ L L ++ L + +R+ HAL+V +W+ RG F LS D A +L L+
Sbjct: 14 LDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRG-IFDLSTEDFASRLCLV 72
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAY-VRARMRGNAELLIDKMRDKGYAVHSL 212
G+ AE FF S+P+ ++D V+ LL+ Y + + R AE MR + +
Sbjct: 73 EISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTMRVQNMLLKPY 132
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV-YSYNIWLSSCGSQGSTEKMEGVFEL 271
PY M+ LY + E + ++ ++ +MKE G+ D + N L + S E ME
Sbjct: 133 PYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPDVEAMEMFLMG 192
Query: 272 MKVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH-YLLSLYGS 329
++V++ + W T ++A Y+K G KA E LRR E + + + + L+ +Y
Sbjct: 193 LEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKDSANKVLMMMYWD 252
Query: 330 VGKKEEVYRVWNLYRSVFP 348
G K++ R L R ++P
Sbjct: 253 AGAKQDASR---LSRLIYP 268
>gi|297834428|ref|XP_002885096.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
gi|297330936|gb|EFH61355.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 140/279 (50%), Gaps = 13/279 (4%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
VL W K G+ L++ E+ + LRK + Y L++++W+ + F + ++ A QLDL
Sbjct: 155 VLEKWVKEGKDLSQAEVSLAIFHLRKRKYYAMCLQLWEWLGANTQ-FEFTEANYASQLDL 213
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
+AKVH + AE+F +P++ + VY LL V AE L +KM++ +
Sbjct: 214 VAKVHSLQKAENFLKDIPESFRGEVVYRTLLANCVLKHHVNKAEDLFNKMKELKFPTSVF 273
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
N ++ LY + + ++ ++ M+ + I+ +Y ++S G G ME + E M
Sbjct: 274 ACNQLLLLY-SMHDRKKISDVLLLMERENIKPSRGTYQFLINSKGLAGDITGMEKIVETM 332
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY--HYLLSLYGSV 330
K ++ + + +T+A YI+ G E+A++ ++ +E + G + P+ LL LY +
Sbjct: 333 K-EEGIEVDPELQATLAKYYIRAGLKERAQDLMKEIEGK--GLQQTPWVCRSLLPLYADI 389
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
G + V R+ S F NL Y IS++ G ++
Sbjct: 390 GDSDNVRRL-----STFVD-QNLRYDNCISAIRAWGKLK 422
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 165/386 (42%), Gaps = 52/386 (13%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
A VL+D + +T + C VVK + + + A EVY+W+N R S A L
Sbjct: 175 ADVLDDRKV---QMTPTDFCFVVKSVGQ-ESWHRAFEVYEWLN-----LRHWYSPNARML 225
Query: 151 DLIAKVHGVASAEDFFLSL-----PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
I V G A+ E + + P +VY A++ Y R+ + L D MR++
Sbjct: 226 STILAVLGKANQEPLAVEVFTRAEPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRER 285
Query: 206 GYAVHSLPYNVMMTLYMKIKEY--DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
G + +N ++ +K E + +++E++ G+R D+ +YN +S+C + E
Sbjct: 286 GCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLE 345
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR------------ 311
+ VF+ M V P+ T++ M ++Y + G KAE+ +ESR
Sbjct: 346 EAVNVFDDM-VAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSF 404
Query: 312 -----------------------ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
G+D + Y+ ++ +YG G+ + +++ +S
Sbjct: 405 LYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGR 464
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ Y +I SL + IE + E L+ R + ++ Y K G +AE
Sbjct: 465 NPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEE 524
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIR 434
F+ ++ G +P+ ++ + + H+R
Sbjct: 525 TFDCMLRSGTRPDQLAYSVMLDIHLR 550
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 154/380 (40%), Gaps = 12/380 (3%)
Query: 73 WNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWM 132
WNA+ + + A V N K G S T + +++ L R + V +
Sbjct: 818 WNALIEAYAASGCYERARA-VFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQEL 876
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRAR 190
+ G F++S S + LD A+ + + + + +Y + R +
Sbjct: 877 QDIG--FKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGK 934
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
+ E ++ +M + G+ +N ++ +Y+ I ++ + + +KE G+ D +YN
Sbjct: 935 QVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYN 994
Query: 251 IWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
I + C E + + E+ V + P T+ ++ + K VE+AEE ++
Sbjct: 995 ILIVMYCRDHRPKEGLVLMDEMRTV--GLEPKLDTYKSLVASFGKQQLVEQAEELFEELQ 1052
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGD 367
S DR YH ++ +Y + G + R++++ + V P + + H ++ S G
Sbjct: 1053 STGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATM--HLLMVSYGSSGQ 1110
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
+ EK+ ++ + ++ YV+ G+++ + EEG +P+ W
Sbjct: 1111 PQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTC 1170
Query: 428 LAEGHIRERRILEALSCLKG 447
+ EA+ L
Sbjct: 1171 FIRAASLSQHTSEAILLLNA 1190
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 102/254 (40%), Gaps = 36/254 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A+++ Y R + G AE L + + +G+ ++ YN + + + ++V+ +
Sbjct: 362 DLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDIC 421
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM + G D +YN + G QG + ++ MK NP+ T++ +
Sbjct: 422 EEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMK-SSGRNPDVITYTVLID---S 477
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+G+ K EE + G E+ L V P +
Sbjct: 478 LGKTNKIEE-------------------------AAGMMSEM-----LNTGVKPTLRT-- 505
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y A+I A+ G E+ F+ L + D ++M+ +++ +A F+ +I
Sbjct: 506 YSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMI 565
Query: 415 EEGGKPNSTSWETL 428
+G P + +E +
Sbjct: 566 HDGIMPEHSLYELM 579
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 1/166 (0%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD Y +++ Y + A L M+ G + Y V++ K + +E M
Sbjct: 431 KDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGM 490
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+SEM G++ + +Y+ + G + E F+ M + P+ +S M +++
Sbjct: 491 MSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCM-LRSGTRPDQLAYSVMLDIHL 549
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
+ + ++A + + + Y +L G+ K E++ RV
Sbjct: 550 RFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRV 595
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y AL+ Y +A AE D M G L Y+VM+ ++++ E + E
Sbjct: 504 RTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKE 563
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M GI + Y + L + G+ E + V M+ +NP ++ + +K
Sbjct: 564 MIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAISY-----ILVKGD 618
Query: 297 QVEKAEESLRRVES 310
++A + LRR S
Sbjct: 619 CYDEAAKMLRRAIS 632
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/236 (16%), Positives = 93/236 (39%)
Query: 203 RDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST 262
R+ G+ + ++ ++ + + E + S+M+ GI+ Y + G
Sbjct: 701 RELGFTGSFTMFEALIQCCLENELFTEASQVFSDMRFCGIKASECLYQSMMLLYCKMGFP 760
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
E + +L + D V N + + + Y ++ +KAE + +R ++
Sbjct: 761 ETAHHLIDLTETDGTVLNNISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNA 820
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
L+ Y + G E V+N P T + ++ +L G +E + + +E +
Sbjct: 821 LIEAYAASGCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIG 880
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
LM+ + + GN + + ++ + G P+ + +A+ R +++
Sbjct: 881 FKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQV 936
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 165/369 (44%), Gaps = 41/369 (11%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
+T + C VVK + + + ++ ALE+Y+ +N R + +A A L ++ K + A A
Sbjct: 178 MTPTDFCFVVKWVGQ-QNWQRALELYECLNLR-HWYAPNARMVATILGVLGKANQEALAV 235
Query: 164 DFFLSLPDTLKDR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
+ F ++ D +VY A++ Y R + L+D MR++G + +N ++ M
Sbjct: 236 EIFARAESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARM 295
Query: 223 K--IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
K E + +++E++ GIR D+ +YN +S+C + + E+ VF M+ + P
Sbjct: 296 KSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRC-QP 354
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVES------------------------------ 310
+ T++ M ++Y + + KAEE + +ES
Sbjct: 355 DLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDIC 414
Query: 311 -----RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARI 365
R G+D + Y+ ++ +YG G+ ++ +++ +S + Y +I SL +
Sbjct: 415 EEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKA 474
Query: 366 GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
+E + E L + ++ Y K G ++AE FN + G KP+ ++
Sbjct: 475 SKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAY 534
Query: 426 ETLAEGHIR 434
+ + +R
Sbjct: 535 SVMLDFFLR 543
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 103/254 (40%), Gaps = 1/254 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A+++ Y R AE L ++ KG+ ++ YN ++ + + ++V + EM
Sbjct: 358 TYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEM 417
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++G D +YN + G QG ++ ++ MK NP+ T++ + K +
Sbjct: 418 VKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMK-SSGRNPDAVTYTVLIDSLGKASK 476
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
VE+A + + Y L+ Y GK+EE +N R L Y
Sbjct: 477 VEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSV 536
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
M+ R +++ ++ E + + D + +MM V+E +D + + E
Sbjct: 537 MLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELS 596
Query: 418 GKPNSTSWETLAEG 431
G L +G
Sbjct: 597 GMNPQVISSVLVKG 610
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ Y R R L++KMR G Y ++T + K + Y++ E +
Sbjct: 983 DEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELF 1042
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E++ G +LD Y++ + + + G K E + +MK + + P +T + Y K
Sbjct: 1043 EELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMK-ESGIEPTISTMHLLMVSYGK 1101
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
GQ E+AE L+ + + D +PY ++ Y G
Sbjct: 1102 SGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKG 1138
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +L+ A+ + RM AE L +++R GY + Y++MM Y ++ + E++++ M
Sbjct: 1021 TYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIM 1080
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KE GI + + ++ + S G G E+ E V + ++ V + +S++ Y+K G
Sbjct: 1081 KESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVV-LDTLPYSSVIDAYLKKGD 1139
Query: 298 VEKAEESL 305
+ E L
Sbjct: 1140 FKAGIEKL 1147
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 36/264 (13%)
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
L A+ +A + + + M+ GY Y +M+ L K K +VE+M+ EM+E G
Sbjct: 886 LEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGF 945
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
+ D+ N L + M +++ ++ D ++ P+ T++T+ MY
Sbjct: 946 QPDLQICNSILKLYLGIEDFKSMGIIYQKIQ-DASLKPDEETYNTLIIMYC--------- 995
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
RDR P EE + + N RS+ Y ++I++
Sbjct: 996 ------------RDRRP--------------EEGFSLMNKMRSLGLEPKLDTYRSLITAF 1029
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
+ E E++FEE S D +LMM Y G+ KAE + E G +P
Sbjct: 1030 NKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTI 1089
Query: 423 TSWETLAEGHIRERRILEALSCLK 446
++ L + + + EA + LK
Sbjct: 1090 STMHLLMVSYGKSGQPEEAENVLK 1113
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 117/277 (42%), Gaps = 17/277 (6%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHS--LPYNVMMTLYMKIKEYDEVESMVS 235
+Y +++ Y R + A L+ G + + Y ++ Y K+K + + ES+V
Sbjct: 739 LYQGMVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVYIDIVETYGKLKIWQKAESLVG 798
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI-- 293
++++ ++D +N + + G E+ +F M D +P + + + I
Sbjct: 799 SLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRD-GPSPTVDSVNGLLQALIVD 857
Query: 294 -KMGQVEKAEESLRRVESRITGRDRVPYHYLLSL--YGSVGKKEEVYRVWNLYRSV--FP 348
++ ++ + L+ + +I+ LL+L + G EV +++N ++ FP
Sbjct: 858 RRLNELYVVIQELQDMGLKISKSS-----ILLTLEAFAQAGNLFEVQKIYNGMKAAGYFP 912
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
T Y M+ L + + +E + E D +I N ++ Y+ +F
Sbjct: 913 --TMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGI 970
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ I + KP+ ++ TL + R+RR E S +
Sbjct: 971 IYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLM 1007
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 9/188 (4%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRV 178
R+ A+++Y M + G A + +D + K V A + + D
Sbjct: 441 RHDQAMQIYRDMKSSGRN--PDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHT 498
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y AL+ AY +A R AE + MR G L Y+VM+ +++ E + + EM
Sbjct: 499 YSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMI 558
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+G D Y + + + + + ++ + M+ +NP ++++ +K G
Sbjct: 559 REGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELSGMNPQ-----VISSVLVKGGCY 613
Query: 299 EKAEESLR 306
+ A + L+
Sbjct: 614 DHAAKMLK 621
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 137/286 (47%), Gaps = 17/286 (5%)
Query: 171 DTLKDRRVYGA---------LLNAYVRARMRGN---AELLIDKMRDKGYAVHSLPYNVMM 218
D ++D +V+G L++ Y + G A+ ++ +M KG + + YN+++
Sbjct: 176 DVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILI 235
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
+ K + + EM+ +G+R +V +YNI ++ S G ++ + + M V +
Sbjct: 236 DGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQM-VSSDL 294
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
PN T + + + K V +A +E + + + Y L+ Y G+ E+ +
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFA 354
Query: 339 VWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
++N+ R +FP V+ Y+ +I+ L R GD++ + E +S K S D N+++
Sbjct: 355 LYNMMIDRGIFPEVST--YNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDS 412
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
K+G KA + + E+G P+ ++ TL +G+ RE + AL
Sbjct: 413 LCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL 458
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 126/250 (50%), Gaps = 18/250 (7%)
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
D G+ + + N +++ +K E ++E + EM ++ I L+V S+NI ++ G
Sbjct: 113 DYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLN 172
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK---AEESLRRVESRITGRDRVPY 320
+ V E MKV V+PN T++T+ Y KMG++ K A+ L+ + ++ + V Y
Sbjct: 173 RAGDVIEDMKV-WGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTY 231
Query: 321 HYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
+ L+ + K E V ++ + + P V Y+ +I+ L G ++ +
Sbjct: 232 NILIDGFC---KDENVSGAMRVFGEMQRQGLRPNVVT--YNILINGLCSDGKVDEAVALR 286
Query: 376 EEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
++ +S S +P + N++++ + K ++A FN + ++G PN+ ++ TL + +
Sbjct: 287 DQMVS--SDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYC 344
Query: 434 RERRILEALS 443
++ R+ +A +
Sbjct: 345 KDGRMEDAFA 354
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 117/270 (43%), Gaps = 10/270 (3%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LL+ V+ G+ E + +M + ++ + +N+++ K+ + + ++ +MK G
Sbjct: 126 LLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWG 185
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVE 299
+ +V +YN + G KM ++K V K + PN T++ + + K V
Sbjct: 186 VSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVS 245
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHA 357
A ++ + + V Y+ L++ S GK +E + + S + P V ++
Sbjct: 246 GAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVT--HNV 303
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIE 415
+I+ + + +F + K DP ++ Y K+G + A A +N +I+
Sbjct: 304 LINGFCKNKTVNEAINLFNDM--EKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMID 361
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCL 445
G P +++ L G R+ + A S +
Sbjct: 362 RGIFPEVSTYNCLIAGLCRKGDVKAARSLM 391
>gi|218200516|gb|EEC82943.1| hypothetical protein OsI_27919 [Oryza sativa Indica Group]
Length = 500
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 158/334 (47%), Gaps = 12/334 (3%)
Query: 90 SASV---LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
SASV + W GR++ + + V LR+ R ++ AL+V +W+ R ++LS D
Sbjct: 62 SASVCAAIRGWMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIM-RERPYKLSELDY 120
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+ L+ AKVHG++ AE FL +P ++ +Y L+ A + + A KMR+
Sbjct: 121 SYLLEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELS 180
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
+ YN ++ L+ + ++++MK + +YNI L ++ + + +
Sbjct: 181 LPISPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVA 240
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
VF MK K V PN T+ +A + + + +E+ +TG + LL L
Sbjct: 241 RVFNDMKRAK-VEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWSTLEILLIL 299
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
YG GK +E+ W+L + + P + + I + ++G I+ E+I W +S+
Sbjct: 300 YGYHGKAKELKMTWDLMQGL-PHIRPKSFILAIEAFGKVGSIDQAEEI---WGKFESTRK 355
Query: 387 PRIA---NLMMSWYVKEGNFDKAEAFFNSIIEEG 417
P++ N ++S Y + G DKA A F + G
Sbjct: 356 PKLTEQFNSILSVYCRHGLVDKASAVFKEMRANG 389
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 162/328 (49%), Gaps = 13/328 (3%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSA-SDAAIQLDLIAKVHGVASAEDFFLSLP 170
++KEL K K A+E++DW+ N LS+ D +I++ G L L
Sbjct: 241 LLKELAKQGYLKRAVEIFDWLRNLEPSHELSSLCDLYTYTTMISQC-GSHQQLRRALELV 299
Query: 171 DTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
++ R + Y AL+N ++A A+ + +M ++G + + + YN+++ +Y+K
Sbjct: 300 AEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKR 359
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
+++E ++ ++++ I+ +V +YN +S+C G E+ V+E M + V P+ TT
Sbjct: 360 CQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKM-LAAGVKPSATT 418
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
++ + + Y K GQVEKA E R + R R+ + Y L+S G+ E +++
Sbjct: 419 YTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMH 478
Query: 345 --SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ P V ++++I++ + G E ++FE+ + D +++ Y + G
Sbjct: 479 KENCKPNVVT--FNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQ 536
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+ +A F + +G P++ + +L E
Sbjct: 537 WRRALKAFEQMQTQGCHPDAAVFNSLME 564
>gi|302789381|ref|XP_002976459.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
gi|300156089|gb|EFJ22719.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
Length = 509
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 179/379 (47%), Gaps = 24/379 (6%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
+ W + G S+T L RVV+ LR +RY AL DW+ N + + +LDL
Sbjct: 52 IKQWIREGNSVTSCGLDRVVRRLRSRKRYLQALMAVDWVANE-KVIPFGYHETLQRLDLC 110
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL- 212
++ H V F LP + Y LL Y + M +AE + ++R G + SL
Sbjct: 111 SRCHHVTRTLLLFRRLPKQWRGEDAYCILLEMYYKRDMLEDAEKTMQELR--GIGIKSLQ 168
Query: 213 PYNVMMTLYMKIKEYD-EVESMVSEMKEKGIRLDVYSYNIWLSSCGS-QGSTEKMEGVFE 270
PY++M++ Y K++ + E MV+E+K G+ LD Y I L++ S G +E V
Sbjct: 169 PYHLMLSFY-KLRGMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGGDMVAVEDVLA 227
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY-------L 323
M+ + + + +A +Y++ G K+E L+R+E + + + Y +
Sbjct: 228 EME-GRGLKLDAVGCLAVAGIYLRSGLRHKSERVLQRLEKSLKSGE---FKYSNSIRRRM 283
Query: 324 LSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
L+++G +G ++ V R+W+ + RS V + + I + R+G ++ E ++
Sbjct: 284 LAMFGKLGDRDAVDRIWHSIERSASTTVEDFIFG--IEAFGRVGKMDEAEDMYMRVGC-- 339
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+S +PR+ N ++ V++G+ +A A + ++ ++ L + +++ + A
Sbjct: 340 NSCNPRLHNAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVTYHLLIKVYLKAGDVSRAT 399
Query: 443 SCLKGAFAAEGAKSWRPKP 461
+ +A G W P+P
Sbjct: 400 LAFESLRSAFGKLEW-PRP 417
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 131/273 (47%), Gaps = 5/273 (1%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDT+ +Y L+N Y R A + ++M ++G + + YN ++ + K D
Sbjct: 396 VPDTV----IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLD 451
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ + + EM E+G+ D Y+ + G+ K +FE M + +++ P+ T++T+
Sbjct: 452 DADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTL-RSLKPDVVTYNTL 510
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
+ K+G++EKA+E + SR + + L++ + S+G E +R+W+ +
Sbjct: 511 MDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGI 570
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
T + + +I R G++ +S D N +++ +VKE NFD+A
Sbjct: 571 KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFF 630
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N++ E G PN ++ + G R R+ EA
Sbjct: 631 LINNMEERGLLPNLVTYNAILGGFSRHGRMQEA 663
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 154/378 (40%), Gaps = 23/378 (6%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASA----EDFFLSLPDTLKD 175
R+ + E + + RG ++A +A L I KV V A EDF S + +
Sbjct: 168 RKLREGSEAFQLLRKRGFCVSINACNAL--LGAIVKVGWVDLAWKVYEDFVKS--GNIVN 223
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
++NA + N + + +M +KG + YN ++ Y + E +V
Sbjct: 224 VYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVD 283
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
M KG++ +++YN ++ +GS E+ + V + M + + PN TF+ M +
Sbjct: 284 CMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEM-LGVGLCPNAATFNPMLVESCRK 342
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
V +AE + R D + + ++ ++ G+ + + V + Y
Sbjct: 343 EDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIY 402
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I+ R D+ G K+ E + D N +++ + D A+ F ++E
Sbjct: 403 TILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVE 462
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVN----VINFFKAC 471
G P+ + TL G+ ++ + +ALS F +S +P V + F K
Sbjct: 463 RGVFPDFYTLTTLIHGYCKDGNMTKALS----LFETMTLRSLKPDVVTYNTLMDGFCKVG 518
Query: 472 EEES------DMGSKEAF 483
E E DM S+E F
Sbjct: 519 EMEKAKELWYDMISREIF 536
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 123/305 (40%), Gaps = 48/305 (15%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYA----------------------------- 208
V+ L+ YV+AR +R +G+
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215
Query: 209 ------VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST 262
V+ N+M+ K + D V +SEM+EKG+ D+ +YN +++ +G
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
+ G+ + M K + P T++ + K G E+A +RV + G P
Sbjct: 276 SEAFGLVDCM-AGKGLKPGLFTYNALINGLCKEGSYERA----KRVLDEMLGVGLCPNAA 330
Query: 323 LLS-LYGSVGKKEEVY---RVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
+ + +KE+V+ RV+N L R V P + + + +++ +R G++ FE
Sbjct: 331 TFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDL--ISFSSIVGVFSRNGELGRALAYFE 388
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ V D I ++++ Y + + A N ++E G + ++ TL G R +
Sbjct: 389 KMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGK 448
Query: 437 RILEA 441
+ +A
Sbjct: 449 MLDDA 453
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
++ Y+RA A ++ M +G + YN ++ ++K + +D +++ M+E+
Sbjct: 579 TIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEER 638
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G+ ++ +YN L G ++ E V M +DK +NP+ +T++++ Y+ +++
Sbjct: 639 GLLPNLVTYNAILGGFSRHGRMQEAEMVLHKM-IDKGINPDKSTYTSLINGYVSKDNMKE 697
Query: 301 AEESLRRVESRITGRDRVP 319
A RV + R VP
Sbjct: 698 A----FRVHDEMLQRGFVP 712
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PDTLKDRRV 178
A ++D M +G + L + I+ L + ++ A DF ++ PD +
Sbjct: 558 AFRLWDEMKEKGIKPTLVTCNTIIKGYL--RAGNLSKANDFLNTMISEGVPPDCI----T 611
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+N++V+ A LI+ M ++G + + YN ++ + + E E ++ +M
Sbjct: 612 YNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMI 671
Query: 239 EKGIRLDVYSY 249
+KGI D +Y
Sbjct: 672 DKGINPDKSTY 682
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 146/331 (44%), Gaps = 12/331 (3%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+V+ L K +R K A EV+ M G F A +D +AK A++ L +
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCG--FPPDAIAYNTMIDGLAKA---GHAQEALKVLDN 285
Query: 172 TLKDRRV-----YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
L V YG L+N+ +A AE L M G+ +S+ Y ++ + K
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
E S+ EM E G R DV ++ + + G+ E+ FE M + PN T++
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM-MRGGCKPNVVTYT 404
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
T+ K+G+V A ++ + + D V Y LL + +G+ +E ++ +
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKC 464
Query: 347 FPGVTNLGYHAMISSLARIGDIE-GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
Y ++++ L G +E ++ +FE+ + + DP + ++ K G D+
Sbjct: 465 SSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDE 524
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
A F ++ EG KP++T++ L G R R
Sbjct: 525 ACRIFQRMVSEGCKPDATTYNILINGLCRSR 555
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 131/313 (41%), Gaps = 39/313 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N V + + ++M G A ++ +N+++ + + + D+ +
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MK K + D++++ I + G EK VF M V P+ + M +K
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+V++A E ++E D + Y+ ++ G +E +V + L ++ P T
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP--TE 295
Query: 353 LGYHAMISSLARIGDIEGMEKIF----------------------------EEWLS---- 380
+ Y +++SL + G +E E++F +E S
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355
Query: 381 -VKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
V++ Y P + +M+ K GNF++A F ++ G KPN ++ T+ +G + R
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 438 ILEALSCLKGAFA 450
+ A +KG A
Sbjct: 416 VANAFRIMKGMIA 428
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 126/308 (40%), Gaps = 33/308 (10%)
Query: 164 DFFLSLPDTLKDRR-----------------VYGALLNAYVRARMR-----GNAELLIDK 201
D S+ +T+KD R V+G +L ++V A +R G A I
Sbjct: 49 DLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTA---ISF 105
Query: 202 MR----DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
R G+ YN +M L + K Y + ++ EM + GI + +S+NI + S
Sbjct: 106 FRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFA 165
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR-ITGRD 316
+ FE+MK K P+ TF + K G EKA E + + D
Sbjct: 166 RTRRADDAVTCFEIMK-RKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPD 224
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
R + ++ + +E V+ + + FP + Y+ MI LA+ G + K+
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQMEKCGFP-PDAIAYNTMIDGLAKAGHAQEALKVL 283
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+ L+ ++++ K G ++AE F + G +PNS + +L G +
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343
Query: 436 RRILEALS 443
R+ EA S
Sbjct: 344 GRMKEACS 351
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 141/344 (40%), Gaps = 26/344 (7%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-- 169
++ K R K A ++D M G +R + +D + K A F +
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAG--YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393
Query: 170 ----PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
P+ + Y ++ + NA ++ M G S+ Y ++ + K+
Sbjct: 394 GGCKPNVV----TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK-MEGVFELMKVD-KAVNPNWT 283
DE ++ E+ + ++ Y+ ++ GS EK ++ +FE K + ++P
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLC 509
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE-VYRVWNL 342
++ K G++++A +R+ S D Y+ L++ G +E V R + L
Sbjct: 510 C--SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN--GLCRSRENRVERAFAL 565
Query: 343 YRSV-----FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
+ P Y + L +IG+++ K+ EE S + D + +
Sbjct: 566 LHDLEKVGYLPDAVT--YTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGL 623
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+G D+A + F ++ +GG P++ ++ + G I+ +++ +A
Sbjct: 624 CYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDA 667
>gi|22165078|gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 174/405 (42%), Gaps = 75/405 (18%)
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WM R LS D A +L+LI KV+G+ A ++F S+PD LK ++ YG+
Sbjct: 33 WMTER-LHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGS--------- 82
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
++ Y + ++ E + +M+ G+ Y+YN
Sbjct: 83 --------------------------LLKCYAEANCVEKAEELFEKMRGMGMA-SSYAYN 115
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
+ + G E++ + + M+ + + P+ +T T+ + LR+ ++
Sbjct: 116 VMMRLYLQNGQVERVHSMHQAME-ESGIVPDVSTTHTLVAV-------------LRKKKT 161
Query: 311 RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
+ Y+++ E++ + N+ N Y I L ++ D+ G
Sbjct: 162 LVAA-------YVVA--------EDIKAIENVLEKA--NSCNSMYMCRIGVLLKMNDMVG 204
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
EK +EEW S +D R+ NL++ Y KEG DKAEA + I++G P + + LA
Sbjct: 205 AEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAG 264
Query: 431 GHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQP 490
G+ + ++ +A K A A+ + W P NV+ E+ ++ + E ++LL++
Sbjct: 265 GYFKVGQVSKAADLTKKALAS-ASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRL 323
Query: 491 GYRKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLLS 529
Y L+ G + KK+ ++DE++E +L+
Sbjct: 324 VTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEETEKILA 368
>gi|302822814|ref|XP_002993063.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
gi|300139155|gb|EFJ05902.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
Length = 570
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 161/360 (44%), Gaps = 12/360 (3%)
Query: 89 GSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI 148
S +V+ + + +TK + V+ +L + +YK +V ++M R E+F L D
Sbjct: 113 ASRNVVRVFRENELDMTKAMMRGVLFKLLRNEKYKPGWKVANYMI-RSEKFELGELDYMF 171
Query: 149 QLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR-MRGNAELLIDKMRDKGY 207
Q+ A +AE+ F +LP K ++ L+ R R E L +++ + +
Sbjct: 172 QIAFAALAGCDRAAENMFANLPRVYKRKKALLVLMAGSSPQRENRVVMERLFKELKHRSW 231
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ N MM ++ + + E K G+ DV SYN++L + + +E
Sbjct: 232 YTEASALNQMMLFSLQPDLRKRIPDLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEE 291
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE----SRITGRDRVPYHYL 323
V+++++ D P+ +T +A YI +G +KA ++L +E S + R + Y+ L
Sbjct: 292 VYQMLQEDPNARPDESTLLILACGYISVGCFDKAGKALVELEEGLDSGLFRRKQATYNKL 351
Query: 324 LSLYGSVGKKEEVYRVWNLYRS-VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
L LYG KE V +W++ S V + Y ++A G EG+ K E + V
Sbjct: 352 LRLYGDTKDKEGVESIWSILSSRPLKAVDSYSY-----AIAAFGKAEGVHKAEEIFAKVD 406
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ M+S Y G DKA F + + K ++ L G++RE + +AL
Sbjct: 407 GLLETNQVIAMLSVYAHYGYADKARELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKAL 466
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 108/237 (45%), Gaps = 28/237 (11%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIR-LDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
YN ++ LY K+ + VES+ S + + ++ +D YSY I ++ G K E +F
Sbjct: 348 YNKLLRLYGDTKDKEGVESIWSILSSRPLKAVDSYSYAI--AAFGKAEGVHKAEEIFA-- 403
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
KVD + N M ++Y G +KA E +++ + V Y YL++ Y G+
Sbjct: 404 KVDGLLETNQVI--AMLSVYAHYGYADKARELFQKLPRKRMKHRLVVYKYLIAGYLREGE 461
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARI-----------GDIEGMEKIFEEWLSV 381
++ +V+++ G T L + S+ R+ G++ +++IF +
Sbjct: 462 VKKALQVFSM------GCTVLRDRCICSAWERVVLDLLDHFASRGEVAVIDRIFRMNSVL 515
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWE--TLAEGHIRER 436
K + R+ +++ Y+ G + F + +E G ++ + E TL + R+R
Sbjct: 516 KHFINMRVYRVVLKAYLNHGA--SLKRFMDWTMEMGFSVDAETRELLTLLQSRFRKR 570
>gi|302780277|ref|XP_002971913.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
gi|300160212|gb|EFJ26830.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
Length = 570
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 161/360 (44%), Gaps = 12/360 (3%)
Query: 89 GSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI 148
S +V+ + + +TK + V+ +L + +YK +V ++M R E+F L D
Sbjct: 113 ASRNVVRVFRENELDMTKAMMRGVLFKLLRNEKYKPGWKVANYMI-RSEKFELGELDYMF 171
Query: 149 QLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR-MRGNAELLIDKMRDKGY 207
Q+ A +AE+ F +LP K ++ L+ R R E L +++ + +
Sbjct: 172 QIAFAALAGCDRAAENIFANLPRVYKRKKALLVLMAGSSPQRENRVVMEKLFKELKHRSW 231
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ N MM ++ + + E K G+ DV SYN++L + + +E
Sbjct: 232 YTEASGLNQMMLFSLQPDLRKRIPDLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEE 291
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE----SRITGRDRVPYHYL 323
V+++++ D P+ +T +A YI +G +KA ++L +E S + R + Y+ L
Sbjct: 292 VYQMLQEDPNARPDESTLLILACGYISVGCFDKAGKALVELEEGLDSGLFRRKQATYNKL 351
Query: 324 LSLYGSVGKKEEVYRVWNLYRS-VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
L LYG KE V +W++ S V + Y ++A G EG+ K E + V
Sbjct: 352 LRLYGDTKDKEGVENIWSILSSRPLKAVDSYSY-----AIAAFGKAEGVHKAEEIFAKVD 406
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ M+S Y G DKA F + + K ++ L G++RE + +AL
Sbjct: 407 GLLETNQVIAMLSVYTHYGYADKARELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKAL 466
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 107/237 (45%), Gaps = 28/237 (11%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIR-LDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
YN ++ LY K+ + VE++ S + + ++ +D YSY I ++ G K E +F
Sbjct: 348 YNKLLRLYGDTKDKEGVENIWSILSSRPLKAVDSYSYAI--AAFGKAEGVHKAEEIFA-- 403
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
KVD + N M ++Y G +KA E +++ + V Y YL++ Y G+
Sbjct: 404 KVDGLLETNQVI--AMLSVYTHYGYADKARELFQKLPRKRMKHRLVVYKYLIAGYLREGE 461
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARI-----------GDIEGMEKIFEEWLSV 381
++ +V+ + G T L + S+ R+ G++ +++IF +
Sbjct: 462 VKKALQVFTM------GCTVLRDRCICSAWERVVLDLLDHFASRGEVAVIDRIFRMNSVL 515
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWE--TLAEGHIRER 436
K + R+ +++ Y+ G + F + +E G ++ + E TL + R+R
Sbjct: 516 KHFINMRVYRVVLKAYLNHGA--SLKRFMDWTMEMGFSVDAETRELLTLLQSRFRKR 570
>gi|22331104|ref|NP_188178.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273796|sp|Q9LRP6.1|PP234_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g15590, mitochondrial; Flags: Precursor
gi|11994226|dbj|BAB01348.1| DNA-binding protein [Arabidopsis thaliana]
gi|20856658|gb|AAM26678.1| AT3g15590/MQD17_5 [Arabidopsis thaliana]
gi|27363266|gb|AAO11552.1| At3g15590/MQD17_5 [Arabidopsis thaliana]
gi|332642175|gb|AEE75696.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 127/249 (51%), Gaps = 7/249 (2%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
VL W K G+ L++ E+ + LRK + Y L++++W+ + F + ++ A QLDL
Sbjct: 160 VLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQ-FEFTEANYASQLDL 218
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
+AKVH + AE F +P++ + VY LL V AE + +KM++ +
Sbjct: 219 VAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVF 278
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
N ++ LY + + ++ ++ M+ + I+ +Y+ ++S G G ME + E +
Sbjct: 279 ACNQLLLLY-SMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETI 337
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY--HYLLSLYGSV 330
K ++ + + S +A YI+ G E+A++ ++ +E + G + P+ LL LY +
Sbjct: 338 K-EEGIELDPELQSILAKYYIRAGLKERAQDLMKEIEGK--GLQQTPWVCRSLLPLYADI 394
Query: 331 GKKEEVYRV 339
G + V R+
Sbjct: 395 GDSDNVRRL 403
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 145/331 (43%), Gaps = 12/331 (3%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+V+ L K +R K A EV+ M G F A +D +AK A++ L +
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCG--FPPDAIAYNTMIDGLAKA---GHAQEALKVLDN 285
Query: 172 TLKDRRV-----YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
L V YG L+N+ +A AE L M G+ +S+ Y ++ + K
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
E S+ EM E G R DV ++ + + G+ E+ FE M + PN T++
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM-MRGGCKPNVVTYT 404
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
T+ K+G+V A ++ + + D V Y LL + +G+ +E ++ +
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKC 464
Query: 347 FPGVTNLGYHAMISSLARIGDIEG-MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
Y +++ L G +E ++ +FE+ + + DP + ++ K G D+
Sbjct: 465 SSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDE 524
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
A F ++ EG KP++T++ L G R R
Sbjct: 525 ACRIFQRMVSEGCKPDATTYNILINGLCRSR 555
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 131/313 (41%), Gaps = 39/313 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N V + + ++M G A ++ +N+++ + + + D+ +
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MK K + D++++ I + G EK VF M V P+ + M +K
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+V++A E ++E D + Y+ ++ G +E +V + L ++ P T
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP--TE 295
Query: 353 LGYHAMISSLARIGDIEGMEKIF----------------------------EEWLS---- 380
+ Y +++SL + G +E E++F +E S
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355
Query: 381 -VKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
V++ Y P + +M+ K GNF++A F ++ G KPN ++ T+ +G + R
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 438 ILEALSCLKGAFA 450
+ A +KG A
Sbjct: 416 VANAFRIMKGMIA 428
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 126/308 (40%), Gaps = 33/308 (10%)
Query: 164 DFFLSLPDTLKDRR-----------------VYGALLNAYVRARMR-----GNAELLIDK 201
D S+ +T+KD R V+G +L ++V A +R G A I
Sbjct: 49 DLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTA---ISF 105
Query: 202 MR----DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
R G+ YN +M L + K Y + ++ EM + GI + +S+NI + S
Sbjct: 106 FRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFA 165
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR-ITGRD 316
+ FE+MK K P+ TF + K G EKA E + + D
Sbjct: 166 RTRRADDAVTCFEIMK-RKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPD 224
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
R + ++ + +E V+ + + FP + Y+ MI LA+ G + K+
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQMEKCGFP-PDAIAYNTMIDGLAKAGHAQEALKVL 283
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+ L+ ++++ K G ++AE F + G +PNS + +L G +
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343
Query: 436 RRILEALS 443
R+ EA S
Sbjct: 344 GRMKEACS 351
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 138/343 (40%), Gaps = 24/343 (6%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-- 169
++ K R K A ++D M G +R + +D + K A F +
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAG--YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393
Query: 170 ----PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
P+ + Y ++ + NA ++ M G S+ Y ++ + K+
Sbjct: 394 GGCKPNVV----TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK-MEGVFELMKVDKAVNPNWTT 284
DE ++ E+ + ++ Y+ + GS E ++ +FE K A N +
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKA-AAENLDPGL 508
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE-VYRVWNLY 343
++ K G++++A +R+ S D Y+ L++ G +E V R + L
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN--GLCRSRENRVERAFALL 566
Query: 344 RSV-----FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
+ P Y + L +IG+++ K+ EE S + D + +
Sbjct: 567 HDLEMVGYLPDAVT--YTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLC 624
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+G D+A + F ++ +GG P++ ++ + G I+ +++ +A
Sbjct: 625 YQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDA 667
>gi|302798621|ref|XP_002981070.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
gi|300151124|gb|EFJ17771.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
Length = 1138
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 185/412 (44%), Gaps = 15/412 (3%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L +WE+ G L K L ++ +LRK++R ALEV DWM ++F D +++D+
Sbjct: 97 MLKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMYY-TKQFPQDLDDVILRMDM 155
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
+ + A+ F L K Y + + + +M +A+ K ++ + +
Sbjct: 156 AVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPNDI 215
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV-YSYNIWLSSCGSQGSTEKMEGVFEL 271
++++ LY + +++V + +++ G++ V + N+ +S G + E +L
Sbjct: 216 TFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFNQL 275
Query: 272 MKVDKAVN-PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG----RDRVPYHYLLSL 326
+ + + +T+S MA Y+ G +KA+ L +E + + R YH L+S+
Sbjct: 276 VPAGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLRRTYHILISM 335
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
Y ++ ++ + RVW + Y AMI S R ++ EK F+E
Sbjct: 336 YSTMKNRDGMERVWK----KIEDLKAQDYVAMIESCGRADEVGSAEKYFKEADRKGLLNQ 391
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
P + ++ Y +G DKAE F + E+ ++ + + ++ R I A+ L+
Sbjct: 392 PSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHYIILANLNARNIDRAVEILE 451
Query: 447 GAFAAEGAKSWRPKPV--NVINFFKACEEES-DMGSKEAFVALLRQPGYRKE 495
A AA G + R +P + K E+ D+ E +A R+ YR +
Sbjct: 452 LAEAA-GMRDGRSRPFLGTFCDVLKTIARETGDVALAETLLADWRKGKYRTD 502
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 169/380 (44%), Gaps = 14/380 (3%)
Query: 124 HALEVYDWMN-NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGAL 182
HALE+ DWM +R F L+ D ++DL ++ V AE F L + Y AL
Sbjct: 713 HALEIADWMALSRPRPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNAL 772
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
L +Y + + RG AE L +++ G N++ ++Y +++ EV + E ++ G+
Sbjct: 773 LLSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYRQLRLDAEVLMLAKEAQKLGV 832
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
LD+ YN+ L + E +E ++ + + +T + MA +Y+ G+ +K
Sbjct: 833 ELDMCFYNLLLPAKFRVQGLEDVEKLYATITSPRDRTRFFTCLA-MANIYVSAGRNDKVL 891
Query: 303 ESLRRV----ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFPGVTNLGYHA 357
E L + E+ + R Y+ L+S+Y S+ V R W L + P + Y
Sbjct: 892 EMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTED--YCC 949
Query: 358 MISSLARIGDIEGMEKIFE-EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI-IE 415
+I + ++G + E IF+ + KS + N MM Y G ++AE + E
Sbjct: 950 IIRAWGKLGHVVRAETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVRRMEYE 1009
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINF--FKACEE 473
G K + + L + + I + LS L+ A A G K R P+ + +
Sbjct: 1010 LGVKLDPWCYHHLVLLYAKAGDIGKMLSTLRAAQAC-GKKERRFTPLAATLWAALNTLAD 1068
Query: 474 ESDMGSKEAFVALLRQPGYR 493
D+ + E + ++ GYR
Sbjct: 1069 AGDVDTAEETLTRWKRSGYR 1088
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 118/270 (43%), Gaps = 36/270 (13%)
Query: 155 KVHGVASAEDFFLSLPDTLKDRR-----VYGALLNAYVRARMRGNAELL---IDKMRDKG 206
++HG++SAE+ F L D + Y + +Y+ A M A+ L I+K D+G
Sbjct: 261 ELHGISSAEEIFNQLVPAGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQG 320
Query: 207 YAVHSLP-----YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
S P Y++++++Y +K D +E + ++++ L Y + SCG
Sbjct: 321 ----SFPKLRRTYHILISMYSTMKNRDGMERVWKKIED----LKAQDYVAMIESCGRADE 372
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
E F+ +N + F+ + +Y GQ +KAE+ ++++ + RD + YH
Sbjct: 373 VGSAEKYFKEADRKGLLNQP-SLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYH 431
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSV---------FPGVTNLGYHAMISSLAR-IGDIEGM 371
Y++ + + + L + F G + ++ ++AR GD+
Sbjct: 432 YIILANLNARNIDRAVEILELAEAAGMRDGRSRPFLGT----FCDVLKTIARETGDVALA 487
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
E + +W K D + N ++ Y+K G
Sbjct: 488 ETLLADWRKGKYRTDIAVYNHLLRVYLKAG 517
>gi|78708864|gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 174/405 (42%), Gaps = 75/405 (18%)
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRAR 190
WM R LS D A +L+LI KV+G+ A ++F S+PD LK ++ YG+
Sbjct: 2 WMTER-LHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGS--------- 51
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
++ Y + ++ E + +M+ G+ Y+YN
Sbjct: 52 --------------------------LLKCYAEANCVEKAEELFEKMRGMGMA-SSYAYN 84
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
+ + G E++ + + M+ + + P+ +T T+ + LR+ ++
Sbjct: 85 VMMRLYLQNGQVERVHSMHQAME-ESGIVPDVSTTHTLVAV-------------LRKKKT 130
Query: 311 RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
+ Y+++ E++ + N+ N Y I L ++ D+ G
Sbjct: 131 LVAA-------YVVA--------EDIKAIENVLEK--ANSCNSMYMCRIGVLLKMNDMVG 173
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
EK +EEW S +D R+ NL++ Y KEG DKAEA + I++G P + + LA
Sbjct: 174 AEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAG 233
Query: 431 GHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQP 490
G+ + ++ +A K A A+ + W P NV+ E+ ++ + E ++LL++
Sbjct: 234 GYFKVGQVSKAADLTKKALAS-ASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRL 292
Query: 491 GYRKEKDYMSLI------GLTDEAVAENNKKNDEDSDEDSEMLLS 529
Y L+ G + KK+ ++DE++E +L+
Sbjct: 293 VTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEETEKILA 337
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 8/282 (2%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+ + A+ +A A + P D Y AL++A+ RA +A + +M D G
Sbjct: 160 IRVFARAGCLAEASAILEAAP--APDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQP 217
Query: 210 HSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ YNV+ Y K+ + EV ++V MKE GI D Y+YN +S C +G + V
Sbjct: 218 ALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQV 277
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
F+ MK P+ TF+++ +Y K + E+A L+R+E+ V Y+ L+S Y
Sbjct: 278 FDEMKA-AGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYV 336
Query: 329 SVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
G EE + +R + P V Y +IS L R+G I+ + E + S +
Sbjct: 337 KDGLLEEALELKQEMEFRGMKPDVVT--YTTLISGLDRVGKIDAALATYSEMVRNGCSPN 394
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
N ++ + G F + A F+ + G P+ +W TL
Sbjct: 395 LCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTL 436
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 154/380 (40%), Gaps = 45/380 (11%)
Query: 70 MIKWNAIFRKLSLMDNPQLGS--ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALE 127
++ WN + LS+ L S + V + +K G + ++ + + A+E
Sbjct: 430 VVTWNTL---LSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAME 486
Query: 128 VYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNA 185
+Y M G +S +A L +A+ AE F + D D Y +LL+A
Sbjct: 487 IYKRMIEAGIYPDISTYNAV--LSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHA 544
Query: 186 YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD 245
Y A+ + L + + + H+ ++ + K+ E E E++ + LD
Sbjct: 545 YANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLD 604
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
+ N +S G +K+E V LM ++ ++N + T++++ MY ++G EK E L
Sbjct: 605 INVLNAMVSIYGKNKMVKKVEEVLSLM-MENSINHSAATYNSLMHMYSRLGDCEKCESIL 663
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARI 365
++S DR Y+ ++ YG G+ +E R
Sbjct: 664 TEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASR--------------------------- 696
Query: 366 GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
+F E D N+ + YV F++A ++ +G +PN ++
Sbjct: 697 --------LFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTF 748
Query: 426 ETLAEGHIRERRILEALSCL 445
++ +G+ R R++EA S L
Sbjct: 749 NSILQGYSRHGRMVEAKSFL 768
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 130/301 (43%), Gaps = 38/301 (12%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
+DR Y L++ R + A + D+M+ G+ + +N ++ +Y K ++++E +
Sbjct: 253 RDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGV 312
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ M+ G V +YN +S+ G E+ + + M+ + + P+ T++T+ +
Sbjct: 313 LKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEF-RGMKPDVVTYTTLISGLD 371
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV-------------- 339
++G+++ A + + + Y+ L+ L+G GK E+ V
Sbjct: 372 RVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVV 431
Query: 340 -WNLYRSVFPGVTNLG---------------------YHAMISSLARIGDIEGMEKIFEE 377
WN SVF G L Y ++ISS +R G + +I++
Sbjct: 432 TWNTLLSVF-GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKR 490
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
+ D N ++S + G +++AE F +++ KP+ S+ +L + ++
Sbjct: 491 MIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKK 550
Query: 438 I 438
+
Sbjct: 551 L 551
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D V A+++ Y + +M E ++ M + + YN +M +Y ++ + ++ ES++
Sbjct: 604 DINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESIL 663
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+E+K G+R D YSYN + + G +G ++ +F MK V P+ T++ Y+
Sbjct: 664 TEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS-GVKPDIVTYNIFIKSYVA 722
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
E+A + +R + ++ + ++ +L Y G+ E + ++PG++
Sbjct: 723 NIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNLPKIYPGIS 779
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 22/210 (10%)
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG----QVEK 300
D +Y +S+ G VF+ M VD V P T++ + Y KM +V
Sbjct: 183 DASAYTALVSAFSRAGRFRDAVAVFQRM-VDGGVQPALVTYNVVFHAYSKMSVPWKEVVA 241
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
+S++ E I RDR Y+ L+S G E +V++ ++ G+
Sbjct: 242 LVDSMK--EDGIE-RDRYTYNTLISCCRRRGLHREAAQVFDEMKAA-------GFEPDKV 291
Query: 361 SLARIGDIEGMEKIFEEWLSV-----KSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSI 413
+ + D+ G + EE + V + P + N ++S YVK+G ++A +
Sbjct: 292 TFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEM 351
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALS 443
G KP+ ++ TL G R +I AL+
Sbjct: 352 EFRGMKPDVVTYTTLISGLDRVGKIDAALA 381
>gi|302801578|ref|XP_002982545.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
gi|300149644|gb|EFJ16298.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
Length = 1138
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 186/412 (45%), Gaps = 15/412 (3%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L +WE+ G L K L ++ +LRK++R ALEV DWM ++F D +++D+
Sbjct: 97 MLKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMYY-TKQFPQDLDDVILRMDM 155
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
+ + A+ F L K Y + + + +M +A+ K ++ + +
Sbjct: 156 AVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPNDI 215
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV-YSYNIWLSSCGSQGSTEKMEGVFEL 271
++++ LY + +++V + +++ G++ V + N+ +S G + E +L
Sbjct: 216 TFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFNQL 275
Query: 272 MKVDKAVN-PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG----RDRVPYHYLLSL 326
+ + + +T+S MA Y+ G +KA+ L +E + + R YH L+S+
Sbjct: 276 VPAGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLRRTYHILISM 335
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
Y ++ ++ + RVW + Y AMI S R ++ EK F+E
Sbjct: 336 YSTMKNRDGMERVWK----KIEDLKAQDYVAMIESCGRADEVGSAEKYFKEADRKGLLNQ 391
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
P + ++ Y +G DKAE F + E+ ++ + + ++ + I A+ L+
Sbjct: 392 PSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHYIILANLNAKNIDRAVEILE 451
Query: 447 GAFAAEGAKSWRPKPV--NVINFFKACEEES-DMGSKEAFVALLRQPGYRKE 495
A AA G + R +P + K +E+ D+ E +A R+ YR +
Sbjct: 452 LAEAA-GMRDGRSRPFLGTFCDVLKTIAKETGDVALAETLLADWRKGKYRTD 502
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 169/380 (44%), Gaps = 14/380 (3%)
Query: 124 HALEVYDWMN-NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGAL 182
HALE+ DWM +R F L+ D ++DL ++ V AE F L + Y AL
Sbjct: 713 HALEIADWMALSRPRPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNAL 772
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
L +Y + + RG AE L +++ G N++ ++Y ++ EV + E ++ G+
Sbjct: 773 LLSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYRQLGLDAEVLMLAKEAQKLGV 832
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
LD+ YN+ L + E++E ++ + + +T + MA +Y+ G+ +K
Sbjct: 833 ELDMCFYNLLLPAKFRVQGLEEVEKLYATITSPRDRTRFFTCLA-MANIYVSAGRNDKVL 891
Query: 303 ESLRRV----ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYHA 357
E L + E+ + R Y+ L+S+Y S+ V R W L + P + Y
Sbjct: 892 EMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTED--YCC 949
Query: 358 MISSLARIGDIEGMEKIFE-EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI-IE 415
+I + ++G + E IF+ + KS + N MM Y G ++AE + E
Sbjct: 950 IIRAWGKLGHVVRAETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVQRMEYE 1009
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINF--FKACEE 473
G K + + L + + I + LS L+ A A G K R P+ + +
Sbjct: 1010 LGVKLDPWCYHHLVLLYAKAGDIGKMLSTLRAAQAG-GKKERRFTPLAATLWAALNTLAD 1068
Query: 474 ESDMGSKEAFVALLRQPGYR 493
D+ + E + ++ GYR
Sbjct: 1069 AGDVDTAEETLTRWKRSGYR 1088
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 118/270 (43%), Gaps = 36/270 (13%)
Query: 155 KVHGVASAEDFFLSLPDTLKDRR-----VYGALLNAYVRARMRGNAELL---IDKMRDKG 206
++HG++SAE+ F L D + Y + +Y+ A M A+ L I+K D+G
Sbjct: 261 ELHGISSAEEIFNQLVPAGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQG 320
Query: 207 YAVHSLP-----YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
S P Y++++++Y +K D +E + ++++ L Y + SCG
Sbjct: 321 ----SFPKLRRTYHILISMYSTMKNRDGMERVWKKIED----LKAQDYVAMIESCGRADE 372
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
E F+ +N + F+ + +Y GQ +KAE+ ++++ + RD + YH
Sbjct: 373 VGSAEKYFKEADRKGLLNQP-SLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYH 431
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSV---------FPGVTNLGYHAMISSLAR-IGDIEGM 371
Y++ + + + L + F G + ++ ++A+ GD+
Sbjct: 432 YIILANLNAKNIDRAVEILELAEAAGMRDGRSRPFLGT----FCDVLKTIAKETGDVALA 487
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
E + +W K D + N ++ Y+K G
Sbjct: 488 ETLLADWRKGKYRTDIAVYNHLLRVYLKAG 517
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 9/315 (2%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGAL 182
A+E+Y+ +G R++ +I L+ + K V AE+ + + D +Y
Sbjct: 335 AMELYEQATEKG--IRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTF 392
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
+N Y R A L I++M G +S+ +N ++ + +KE D+ E V +M EKG+
Sbjct: 393 VNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGV 452
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
V +YN + G + ++ + E M+ + V PN ++ ++ K G++ +AE
Sbjct: 453 TPSVETYNTLIDGYGKLCTFDRCFQILEQME-EIGVKPNVVSYGSLINCLCKDGKILEAE 511
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRS-VFPGVTNLGYHAMIS 360
LR + R + Y+ L+ VGK ++ R ++ + RS + P T + Y+ +I
Sbjct: 512 IVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISP--TLVTYNVLID 569
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
L + G + E + S S D N ++S Y GN K + ++ G KP
Sbjct: 570 GLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKP 629
Query: 421 NSTSWETLAEGHIRE 435
++ L G +E
Sbjct: 630 TVRTYHPLISGCSKE 644
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 146/366 (39%), Gaps = 54/366 (14%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV- 178
+++ ++++ + N G FR A + K+ + +F D+++ R V
Sbjct: 155 KQFVKVVDLFMEIENSG--FRTDTFMYAKAIQAAVKLQNLKMGMEFL----DSMRKRGVR 208
Query: 179 -----YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
Y L+ R + +AE + D+M + + YN ++ Y K+ E D M
Sbjct: 209 PNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKM 268
Query: 234 VSEMKEKGIRLDVYSYNIWLSS-CGSQGSTE------KME-------------------- 266
MKEK + ++ ++N LS C + E +ME
Sbjct: 269 RERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLR 328
Query: 267 -----GVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G EL + +K + N T S + K G+VEKAEE L++ D V
Sbjct: 329 CDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
Y+ ++ Y +G + S ++ ++++I D++ M+K EEW+
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFC---DMKEMDKA-EEWV 444
Query: 380 S--VKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+ P + N ++ Y K FD+ + E G KPN S+ +L ++
Sbjct: 445 KKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKD 504
Query: 436 RRILEA 441
+ILEA
Sbjct: 505 GKILEA 510
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/298 (17%), Positives = 122/298 (40%), Gaps = 34/298 (11%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ +LL+ + R A L+ +M G+ Y+++ ++ + + + +
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQA 342
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKME-----------------------GVFELMKV 274
EKGIR++ Y+ +I L+ QG EK E G + +
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDM 402
Query: 275 DKAV-----------NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+KA+ PN TF+++ + M +++KAEE ++++ + Y+ L
Sbjct: 403 NKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTL 462
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ YG + + +++ + + Y ++I+ L + G I E + + +
Sbjct: 463 IDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGV 522
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ ++ N+++ G A FF+ ++ P ++ L +G ++ ++ EA
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEA 580
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 137/318 (43%), Gaps = 11/318 (3%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKD 175
K + + A+E+Y++M G+ L + + K D F+ + ++ D
Sbjct: 118 KSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEK--QFVKVVDLFMEIENSGFRTD 175
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+Y + A V+ + +D MR +G + YNV++ + K + E M
Sbjct: 176 TFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFD 235
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM + + +YN + G + + E MK +K+V PN TF+++ + KM
Sbjct: 236 EMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMK-EKSVAPNIITFNSLLSGLCKM 294
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG---VTN 352
++++A L+ +E + G Y Y + L+ + + ++ LY + N
Sbjct: 295 RKMKEARSLLKEME--VNGFMPDGYTYSI-LFDGLLRCDDGNGAMELYEQATEKGIRINN 351
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+++ L + G +E E+I +++ D I N ++ Y + G+ +KA
Sbjct: 352 YTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIER 411
Query: 413 IIEEGGKPNSTSWETLAE 430
+ G +PNS ++ +L +
Sbjct: 412 MESFGLRPNSITFNSLID 429
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
R V P V Y+ +I L R I EK+F+E ++ N ++ Y K G
Sbjct: 205 RGVRPNV--FIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGEL 262
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
D A + E+ PN ++ +L G + R++ EA S LK
Sbjct: 263 DAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLK 305
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 156/341 (45%), Gaps = 13/341 (3%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI--AKVHGVASAEDFFLSL 169
V+ L K +Y+ A EV+ M G LS + L+ K V E F +
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSG----LSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 170 P--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
D + D + ++++ + R+ A + + +++ G ++ Y +++ Y +
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
++ +EM ++G +DV +YN L + + + +F M ++A+ P+ T +
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM-TERALFPDSYTLTI 485
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRS 345
+ + K+G ++ A E ++++ + D V Y+ LL +G VG + +W + +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ P T + Y ++++L G + ++++E +S I N M+ Y + GN
Sbjct: 546 ILP--TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
E+F +I EG P+ S+ TL G +RE + +A +K
Sbjct: 604 GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 5/268 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V+ L+ YV+AR A +R KG+ V N ++ ++I + + E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G+ ++VY+ NI +++ G EK+ G F +K V P+ T++T+ + Y G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKV-GTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+E+A E + + + Y+ +++ GK E V+ L + P T Y
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT--Y 343
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++ + GD+ EK+F + S D + MMS + + GN DKA +FNS+ E
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
G P++ + L +G+ R+ I A++
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMN 431
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 24/244 (9%)
Query: 280 PNW----TTFSTMATMYIKMGQVEKAEESLRRVESRI-----------------TGRDRV 318
PN+ + S M + ++ G++ A+ L R+ R G +
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS 166
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
+ L+ Y K E + + L RS V+ +A+I SL RIG +E +++E
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+ N+M++ K+G +K F + + E+G P+ ++ TL + + +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 439 LEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDY 498
EA L A +G VIN C+ +KE F +LR Y
Sbjct: 287 EEAFE-LMNAMPGKGFSPGVYTYNTVIN--GLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 499 MSLI 502
SL+
Sbjct: 344 RSLL 347
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ +++ Y R+ + E ++KM +G+ + YN ++ +++ + + +V +M
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 238 KEK--GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+E+ G+ DV++YN L Q ++ E V M +++ VNP+ +T++ M ++
Sbjct: 647 EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM-IERGVNPDRSTYTCMINGFVSQ 705
Query: 296 GQVEKA----EESLRR 307
+ +A +E L+R
Sbjct: 706 DNLTEAFRIHDEMLQR 721
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 99/225 (44%), Gaps = 5/225 (2%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKD 175
K ++A+E++ M + R RL LD KV + +A++ + + + L
Sbjct: 492 KLGNLQNAMELFQKMKEK--RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
Y L+NA A + D+M K + N M+ Y + + ES +
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFSTMATMYIK 294
+M +G D SYN + + + K G+ + M+ ++ + P+ T++++ + +
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
Q+++AE LR++ R DR Y +++ + S E +R+
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 128/269 (47%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +Y L+N Y R M A + DKM ++G A+ + YN ++ K K + ++
Sbjct: 359 DNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALF 418
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM E+G+ D ++ + +G+ K +F +M K + P+ T++ + + K
Sbjct: 419 DEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIM-TQKNIKPDIVTYNILIDGFCK 477
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
++EKA E + SR + + Y L++ Y ++G E +R+W+ + + + P T
Sbjct: 478 TTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKP--TL 535
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ + +I R GD+ ++ + +S D N +++ +VK DKA N
Sbjct: 536 VTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINK 595
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ +G +P+ ++ + G R+ R+ EA
Sbjct: 596 METKGLQPDVVTYNVILNGFCRQGRMQEA 624
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 133/312 (42%), Gaps = 5/312 (1%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGAL 182
A EVY+ + G L+ I ++ + K H + + F + + D Y L
Sbjct: 169 AWEVYNEIARSG--IELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTL 226
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
+NAY R + G A +++ M KG YN ++ K Y + + +EM G+
Sbjct: 227 INAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGL 286
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
D +YN L + + + +F M + + V+P+ +FS++ + + G +++A
Sbjct: 287 SPDTTTYNTLLVESCRNNNFLEAKDIFSDM-LHRGVSPDLISFSSLIGVSSRNGHLDQAL 345
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
R +++ D V Y L++ Y G E + + + + Y+ +++ L
Sbjct: 346 MYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGL 405
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
+ + +F+E + D ++ + KEGN KA + F + ++ KP+
Sbjct: 406 CKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDI 465
Query: 423 TSWETLAEGHIR 434
++ L +G +
Sbjct: 466 VTYNILIDGFCK 477
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 119/302 (39%), Gaps = 39/302 (12%)
Query: 144 SDAAIQLDLIAKVHGVASAE--DFFLSLPDTLK-DRRVYGALLNAYVRARMRGNAELLID 200
SDA + + + GV+ E + +S+ T D V+ L+ +YV+AR
Sbjct: 80 SDAQTLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFK 139
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+R KG+ V N ++ +K+ D + +E+ GI L+VY+ NI
Sbjct: 140 ILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNI--------- 190
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
M K +++ + L +E + D V Y
Sbjct: 191 ---------------------------MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTY 223
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
+ L++ Y G E + V N T Y+A+I+ L + G + +F E LS
Sbjct: 224 NTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLS 283
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ S D N ++ + NF +A+ F+ ++ G P+ S+ +L R + +
Sbjct: 284 IGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQ 343
Query: 441 AL 442
AL
Sbjct: 344 AL 345
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
++ Y R+ A+ + KM +G S+ YN ++ ++K + D+ ++++M+ K
Sbjct: 540 TVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETK 599
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G++ DV +YN+ L+ QG ++ E + M +++ ++P+ +T++T+ Y+ +++
Sbjct: 600 GLQPDVVTYNVILNGFCRQGRMQEAELILRKM-IERGIDPDRSTYTTLINGYVSQDNLKE 658
Query: 301 A----EESLRR 307
A +E L+R
Sbjct: 659 AFRFHDEMLQR 669
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N +V+ A LI+KM KG + YNV++ + + E E ++
Sbjct: 569 DSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELIL 628
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQ 259
+M E+GI D +Y ++ SQ
Sbjct: 629 RKMIERGIDPDRSTYTTLINGYVSQ 653
>gi|12321886|gb|AAG50982.1|AC073395_24 hypothetical protein, 3' partial; 101251-102939 [Arabidopsis
thaliana]
Length = 532
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 52/311 (16%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+V++LR R + ALEV DWM + + + L D + + L KV + AE FF S+P+
Sbjct: 79 IVEKLRSSNRPRQALEVSDWMVEQ-KMYNL-PEDFSARFHLTEKVLNLEEAEKFFESIPE 136
Query: 172 TLKDRRVYGALLNAYVRA---RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
++ +Y +LL +Y R + AE + KM+ G + PYN M +LY + D
Sbjct: 137 NMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRD 196
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF----ELMKVDKAVNPNWTT 284
+V+ ++ EMKE + LD + N L + M+ E+ ++D T
Sbjct: 197 KVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLADRKEITRLD------GLT 250
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
MA Y++ G++ E+V+RVW+ Y+
Sbjct: 251 MLAMAKAYVRDGEI-----------------------------------EDVHRVWDKYK 275
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKI-FEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+ N + +I SL ++GD +G EKI + EW +D RI ++++S Y ++G
Sbjct: 276 ATRQK-DNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMV 334
Query: 404 DKAEAFFNSII 414
KA+ N +
Sbjct: 335 MKADKLVNKTL 345
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L + +K G ++ L ++K LR + ALE WM + + F L + D A +L L
Sbjct: 357 LLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQK-KVFNLFSEDYATRLHL 415
Query: 153 IAKVHGVASAEDFF-LSLPDTLKDRRVYGALLNAYVRA-RMRGNAELLIDKMRDKGYAVH 210
KV G+ AE+FF S+P+ +KD VY LL+ Y R+ + AE + +KMR+ G
Sbjct: 416 TEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSK 475
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
P+N +++LY + V ++ +MK K I D+ + N L + + + ME
Sbjct: 476 LSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSME 531
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 158/346 (45%), Gaps = 15/346 (4%)
Query: 103 SLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIA---KVHGV 159
S T + C ++ L + +R A ++ D M + DAA+ LIA K+ +
Sbjct: 89 SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKD-----CHPDAAVYNCLIAGLCKMGKI 143
Query: 160 ASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
+A + + + + D Y +L+ + A L++KM++ G ++ YN +
Sbjct: 144 DAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNAL 203
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ K + +EV ++ EM E G D +SYN ++ G E+ + E M ++K
Sbjct: 204 LNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM-IEKK 262
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
P+ T++++ + K+ ++++AE L + R + Y L+ + + + Y
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAY 322
Query: 338 RVW-NLYRS-VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMS 395
RV +++++ + P + Y+ ++ L + G +E ++ E + + D +++++
Sbjct: 323 RVMEDMFKAGISPDLVT--YNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVN 380
Query: 396 WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
K G D A ++E G +PN ++ T+ +G + ++ E
Sbjct: 381 GLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEG 426
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 121/275 (44%), Gaps = 13/275 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y LL+ +A A L++ M +K A + Y++++ K+ + D+ ++
Sbjct: 336 DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLL 395
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M E+G + ++ ++N + G ++ V ELMK + + P+ T+ST+ Y K
Sbjct: 396 EMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMK-EVSCTPDVVTYSTLIDGYCK 454
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+++ A L D+ Y +L S GK EE V +L T+
Sbjct: 455 ANRMQDAFAILG------ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSH 508
Query: 355 YHAMISSLARIGDIE-GMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFN 411
Y +I L D+E G E + + + +P + +++++ K + A +
Sbjct: 509 YALIIGGLC---DVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLD 565
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++E+G P+ ++ +L +G + ++ A C K
Sbjct: 566 VMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFK 600
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 116/276 (42%), Gaps = 15/276 (5%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D Y L+N + +A LL++ M ++G + + +N M+ + K + DE
Sbjct: 367 DCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEG 426
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++ MKE DV +Y+ + +M+ F ++ ++P+ ++S+M
Sbjct: 427 HKVLELMKEVSCTPDVVTYSTLID---GYCKANRMQDAFAIL----GISPDKASYSSMLE 479
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG--SVGKKEEVYRVWNLY--RSV 346
G+VE+A+E + + + G HY L + G V + +E ++ + R
Sbjct: 480 GLCSTGKVEEAQEVMDLMTKQ--GCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGC 537
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
P + Y +I+ L + +E + + L D ++ + K D A
Sbjct: 538 EPNLYT--YSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAA 595
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F ++ + G +P+ ++ L G + + +A+
Sbjct: 596 YQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAI 631
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+N + + +A ++D M +KG Y ++ + KI + D M
Sbjct: 543 TYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTM 602
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT-FSTMATM 291
++ G D +YNI +S G+ EK V +LM ++K NP+ T FS M ++
Sbjct: 603 RDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLM-LEKGCNPDAATYFSLMRSL 656
>gi|442748377|gb|JAA66348.1| Putative chloroplast [Ixodes ricinus]
Length = 93
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 59/77 (76%)
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
M MYIK G +EKAEE LR++E I G DR PYH L++LYG++G++EEVYR+WN+Y++ F
Sbjct: 1 MVVMYIKSGLLEKAEECLRKLEDVIMGWDRRPYHNLMTLYGTMGREEEVYRIWNIYKASF 60
Query: 348 PGVTNLGYHAMISSLAR 364
+ N YHA+IS+L R
Sbjct: 61 ANIPNYRYHAVISALIR 77
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 187/431 (43%), Gaps = 24/431 (5%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P GS + D K SL + L V KE + ++ +L ++ +M R + +
Sbjct: 82 PPRGSIARCLDPFKNKLSLNDFAL--VFKEFAQRGDWQRSLRLFKYMQ-RQIWCKPNEHI 138
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVY--GALLNAYVR-ARMRGNAELLIDKM 202
I + L+ + + + F +P R VY A++NAY R + + ELL + M
Sbjct: 139 YTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELL-NGM 197
Query: 203 RDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
+ + + L YN ++ + +++ + + +EM+ +GI+ DV +YN L +C +G
Sbjct: 198 KQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGL 257
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
++ E VF M + + P+ T+S + + K+ ++EK E LR +ES D Y+
Sbjct: 258 GDEAEMVFRTMN-ESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYN 316
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
LL Y +G +E V+ ++ Y +++ + G + + IF E
Sbjct: 317 VLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVS 376
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL----AEG------ 431
+ D N+++ + + G F + F+ ++EE +PN ++E L +G
Sbjct: 377 NTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDA 436
Query: 432 -----HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVAL 486
H+ E+ I+ + G A G + + + V N + + +F+
Sbjct: 437 KKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHA 496
Query: 487 LRQPGYRKEKD 497
+ G KE +
Sbjct: 497 FARGGLYKEAE 507
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+ Y ++ A+ +A + A ++ + M + G YN + + + Y E E+++S
Sbjct: 453 KAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSR 512
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKM 295
M E G++ DV+S+N + + G E E V ++++KA PN T + ++Y
Sbjct: 513 MNESGLKRDVHSFNGVIKAFRQGGQYE--EAVKSYVEMEKANCEPNELTLEVVLSVYCSA 570
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
G V+++EE + +++ + Y +L+LY + + Y +
Sbjct: 571 GLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNL 614
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 106/243 (43%), Gaps = 6/243 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ A + + +A+ ++ M +KG S Y ++ + + Y+E + + M
Sbjct: 419 TYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTM 478
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G V +YN ++ + G ++ E + M + + + +F+ + + + GQ
Sbjct: 479 NEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMN-ESGLKRDVHSFNGVIKAFRQGGQ 537
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGY 355
E+A +S +E + + +LS+Y S G +E + ++ + P V + Y
Sbjct: 538 YEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSV--MCY 595
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVK-SSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
M++ A+ + + +E ++++ S I ++ + E N+ E F+ +
Sbjct: 596 CLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQMIKGDFDDESNWQIVEYVFDKLN 655
Query: 415 EEG 417
EG
Sbjct: 656 SEG 658
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 140/337 (41%), Gaps = 66/337 (19%)
Query: 110 CRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ---------------LDLIA 154
C +V L K + ++ LE+ D M R R S S+AA+ L+L+
Sbjct: 301 CTLVCGLCKVQEFEVGLEMIDEM----LRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVK 356
Query: 155 KVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPY 214
+V + + F VY AL+++ + R AELL D+M G + + Y
Sbjct: 357 RVAEFGVSPNIF-----------VYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTY 405
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV 274
++++ ++ + + D S + EM + G++ VY YN ++ G E + M +
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEM-I 464
Query: 275 DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
+K + P T++++ Y G++ KA R+ +TG+ VP Y
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKA----LRLYHEMTGKGIVPSIYT----------- 509
Query: 335 EVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
+ ++S L R G I K+F E + N+M+
Sbjct: 510 --------------------FTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMI 549
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
Y +EGN KA F N +IE+G P++ S+ L G
Sbjct: 550 EGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHG 586
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 113/256 (44%), Gaps = 7/256 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+ + R A + M +G + + Y V++ +K K+ ++ EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMH 674
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++G++ D Y + + G ++ G+++LM +++ PN T++ + K G V
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM-INEGCVPNEVTYTAVINGLCKAGFV 733
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLS-LYGSVGKKEEVYRVWNLYRSVFPGV--TNLGY 355
+AE ++ + ++V Y L L VG ++ + L+ ++ G+ Y
Sbjct: 734 NEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVG---DMKKAVELHNAILKGLLANTATY 790
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +I R G +E ++ + S D M+S + + KA +NS+ E
Sbjct: 791 NMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTE 850
Query: 416 EGGKPNSTSWETLAEG 431
+G +P+ ++ TL G
Sbjct: 851 KGIRPDRVAYNTLIHG 866
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 145/371 (39%), Gaps = 89/371 (23%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD 175
L KFR + A+E++D M N G R PD
Sbjct: 202 LVKFRHFGLAMELFDDMINVGIR-------------------------------PDVY-- 228
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+Y ++ + + A+ +I +M G V+ +PYNV++ K ++ E +
Sbjct: 229 --IYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKK 286
Query: 236 EMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++ K ++ DV +Y + C Q +E + E++++ +P+ S++ K
Sbjct: 287 DLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRL--RFSPSEAAVSSLVEGLRK 344
Query: 295 MGQVEKAEESLRRV----------------ESRITGR---------DR----------VP 319
G+VE+A ++RV +S GR DR V
Sbjct: 345 RGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVT 404
Query: 320 YHYLLSLYGSVGKKEEVYRVW------NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
Y L+ ++ GK + L SV+P Y+++I+ + GDI E
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYP------YNSLINGHCKFGDISAAES 458
Query: 374 IFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+ E ++ K +P + +M Y +G +KA ++ + +G P+ ++ TL G
Sbjct: 459 LMAEMINKK--LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSG 516
Query: 432 HIRERRILEAL 442
R I +A+
Sbjct: 517 LFRAGLIRDAV 527
>gi|449457827|ref|XP_004146649.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 204
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 10/172 (5%)
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
++ L LY GKK+E++R+WNLY+ + N G+ +MI+SL + DI+G E+I++EW
Sbjct: 19 FNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITSLFVLDDIKGAERIYKEWE 76
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+ K SYD RI NL++ Y + G +KAE N ++ K + SW LA G++++ ++
Sbjct: 77 TQKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGYLQKDQLP 136
Query: 440 EALSCLKGAFAAEGAKSWRPKPVNVINFFKAC--EEESDMGSKEAFVALLRQ 489
+A+ LK A S P +N + A + + D+ E V LLR+
Sbjct: 137 QAVETLK------LAASVCPSRLNYVKEILAAFLDGKQDVEETEKVVNLLRE 182
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 168/382 (43%), Gaps = 8/382 (2%)
Query: 66 ERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHA 125
E +I + + L NP A + + G + + +++ L + H
Sbjct: 3 ELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHV 62
Query: 126 LEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDR---RVYGAL 182
+ D M R +R S A + AK A + F ++ D R + ++
Sbjct: 63 GRIVDLM--RAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
LNA++ + AEL + G + + YN+++ + K +++++ + +++ M E G+
Sbjct: 121 LNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGL 180
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
D+ SY +++ G+ +F+ M V + VNP+ ++ + +++ G KA
Sbjct: 181 NPDILSYGTLINALAKSGNLLDAVELFDEMSV-RGVNPDVMCYNILIDGFLRKGDFVKAN 239
Query: 303 ESLRRVESRITGRDRV-PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
E +R+ + + V Y+ +++ +GK +E +WN + + +MI
Sbjct: 240 EIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHG 299
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L++ G+ EK+F+E + S D R N M+S + G +K +N ++ + N
Sbjct: 300 LSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWN-VMSKNNCCN 358
Query: 422 STSWETLAEGHIRERRILEALS 443
S+ L +G + +++ +A+
Sbjct: 359 IVSYNMLIQGLLDNKKVEQAIC 380
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 148/338 (43%), Gaps = 7/338 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSL 169
++K K R+++ + WM G + + I + +AK + A + F +S+
Sbjct: 155 LIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLI--NALAKSGNLLDAVELFDEMSV 212
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL-PYNVMMTLYMKIKEYD 228
D Y L++ ++R A + ++ + S+ YN+M+ K+ + D
Sbjct: 213 RGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLD 272
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
E M + MK+ D+++++ + G+ E VF+ M ++ ++P+ T++ M
Sbjct: 273 ESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEM-IESGLSPDVRTYNAM 331
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
+ + G++ K E L V S+ + V Y+ L+ K E+ W L
Sbjct: 332 LSGLFRTGKLNKCFE-LWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGL 390
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ Y +I+ L + G + +I EE + + D + M+ K+G ++A
Sbjct: 391 KADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVE 450
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ + + K NS + +L G++R ++ EA+S L+
Sbjct: 451 LIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLR 488
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/267 (17%), Positives = 112/267 (41%), Gaps = 3/267 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++++ + M A LI +M+ ++S +N ++ Y++ + +E S++
Sbjct: 428 DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVL 487
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
EMK K V SYN ++ C ++ ++ + E++ ++ + P+ T+S +
Sbjct: 488 REMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEML--EEGLKPDMITYSLLIDGLC 545
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+ +V+ A + ++ D ++ ++ + K + ++ R V +
Sbjct: 546 RGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLV 605
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
++ ++ L + GD KI++ L D N+ A F
Sbjct: 606 THNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDA 665
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILE 440
++ G PN+ +W L + ++ ++E
Sbjct: 666 LDRGILPNAPTWNVLVRAVVDDKPLME 692
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 113/280 (40%), Gaps = 11/280 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG L+N + A ++++ ++G + + Y+ M+ K ++ ++
Sbjct: 393 DSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELI 452
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+MK+ +L+ + +N ++ E+ V MK K P +++T+ K
Sbjct: 453 HQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMK-SKDCAPTVVSYNTIINGLCK 511
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-----PG 349
+ A SL+ + D + Y L+ + + E+V NL+ P
Sbjct: 512 AERFSDAYLSLKEMLEEGLKPDMITYSLLID---GLCRGEKVDMALNLWHQCINKRLKPD 568
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ ++ +I L ++ +IF + V D N +M K G+ +A
Sbjct: 569 LQ--MHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKI 626
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAF 449
++ I+E G +P+ S+ +G R+ +A+ L A
Sbjct: 627 WDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDAL 666
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 107/251 (42%), Gaps = 21/251 (8%)
Query: 134 NRGERFRLSASDAAIQLDLIA---KVHGVASA---EDFFLSLPDTLKDRR-----VYGAL 182
N+ R A + LD A VHG+ E + K+RR V+ +L
Sbjct: 411 NKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSL 470
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
+N YVRA A ++ +M+ K A + YN ++ K + + + + EM E+G+
Sbjct: 471 INGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGL 530
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFEL--MKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
+ D+ +Y++ + +G EK++ L ++K + P+ + + +V+
Sbjct: 531 KPDMITYSLLIDGL-CRG--EKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDV 587
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVT--NLGYH 356
A E ++ D V ++ ++ G E ++W+ L + P + N+ +
Sbjct: 588 ALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFK 647
Query: 357 AMISSLARIGD 367
+ S AR+ D
Sbjct: 648 GLCSC-ARVSD 657
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 183/416 (43%), Gaps = 18/416 (4%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI--AKVHGVASAEDFFLSL 169
V+ L K +Y+ A EV+ M G LS + L+ K E+ F +
Sbjct: 301 VINGLCKHGKYERAKEVFAEMLRSG----LSPDSTTYRSLLMEACKKGDAVETENIFSDM 356
Query: 170 P--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
D + D + ++++ + R+ A + + +++ G ++ Y +++ Y +
Sbjct: 357 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 416
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
E ++ +EM ++G +DV +YN L + + + +F M ++ + P+ T +
Sbjct: 417 SEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM-TERGLFPDSYTLTI 475
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRS 345
+ + K+G ++ A E ++++ + D V Y+ LL +G VG + +W + +
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ P T + + ++++L G + ++++E +S I N M+ Y + GN
Sbjct: 536 ILP--TPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASD 593
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVI 465
E F +I EG P+ S+ TL G ++E + +A +K +G P
Sbjct: 594 GEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGG--LVPDVFTYN 651
Query: 466 NFFKACEEESDMGSKEAFVALLRQPGYRKEKD-YMSLIG--LTDEAVAENNKKNDE 518
+ E+ M EA + + + G ++ Y SLI ++ + + E + +DE
Sbjct: 652 SILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDE 707
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 5/268 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V+ L+ +V+AR A +R KGY V N ++ ++I + + E+
Sbjct: 157 VFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI 216
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G+ ++VY+ NI +++ G EK+ G F +K V P+ T++T+ + Y G
Sbjct: 217 SRSGVGVNVYTLNIMVNALCKDGKMEKV-GTFLSEVQEKGVYPDIVTYNTLISAYSSQGL 275
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+E+A E + + S+ Y+ +++ GK E V+ L + P T Y
Sbjct: 276 MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT--Y 333
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++ + GD E IF + S D + MMS + + GN DKA +FNS+ E
Sbjct: 334 RSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 393
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
G P++ + L +G+ R+ I EA++
Sbjct: 394 AGLIPDNVIYTILIQGYCRKGMISEAMN 421
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 26/245 (10%)
Query: 280 PNW----TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP-YHYLLSLYGSVG--- 331
PN+ + S M + ++ G++ A+ + R+ R +G RV + L+S Y + G
Sbjct: 97 PNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRR-SGVSRVEIVNSLVSTYSNCGSND 155
Query: 332 --------------KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
K E Y + L RS V+ +A+I SL RIG +E +I++E
Sbjct: 156 SVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQE 215
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
+ N+M++ K+G +K F + + E+G P+ ++ TL + +
Sbjct: 216 ISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGL 275
Query: 438 ILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKD 497
+ EA L A ++G VIN C+ +KE F +LR
Sbjct: 276 MEEAFE-LMHAMPSKGFSPGVYTYNTVIN--GLCKHGKYERAKEVFAEMLRSGLSPDSTT 332
Query: 498 YMSLI 502
Y SL+
Sbjct: 333 YRSLL 337
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 128/269 (47%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +Y L++ Y R A + D+M ++G + + YN ++ K K + + +
Sbjct: 292 DNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLF 351
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM E+G D Y++ + G+ K +F M + + P+ ++T+ + K
Sbjct: 352 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM-TQRNIKPDIVAYNTLIDGFCK 410
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
+G++EKA E + SR + + Y L++ Y SVG E +R+W++ + + P T
Sbjct: 411 VGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKP--TL 468
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ + +I R GD ++ ++ + D N +++ +V+E N DKA + N
Sbjct: 469 VTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINK 528
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ +EG P+ ++ + G R+ R+ EA
Sbjct: 529 MEKEGLLPDIITYNVVMNGFCRQGRMQEA 557
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/282 (18%), Positives = 125/282 (44%), Gaps = 7/282 (2%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
++NA + + + + +M G + YN ++ Y + +E +++ M +KG
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG 183
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
++ +++YN ++ +G + +G+ E++ + ++P+ TT++T+ + +
Sbjct: 184 LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNI--GLSPDTTTYNTLLVESCRRDNFSE 241
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A+E + + D V + L++++ ++ + + N+ Y ++
Sbjct: 242 AKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH 301
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
R G++ KI +E L D N +++ KE A+ F+ ++E G P
Sbjct: 302 GYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALP 361
Query: 421 NSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
+ ++ TL GH ++ + +ALS F ++ +P V
Sbjct: 362 DFYTFTTLIHGHCQDGNMTKALS----LFGTMTQRNIKPDIV 399
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 108/265 (40%), Gaps = 36/265 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V+ L+ YV+AR +R KGY V N ++ +KI + + E+
Sbjct: 50 VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV 109
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
GI L+VY+ NI +++ G + ++ M+ + + T++T+ Y + G
Sbjct: 110 VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEME-GNGIYADMVTYNTLIGAYCREGL 168
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+E+A E + + + G K ++ Y+A
Sbjct: 169 LEEAFEIMNSMADK-------------------GLKPSLFT----------------YNA 193
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I+ L + G + I E L++ S D N ++ + NF +A+ F ++ +G
Sbjct: 194 IINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG 253
Query: 418 GKPNSTSWETLAEGHIRERRILEAL 442
P+ S+ +L R R + +AL
Sbjct: 254 VVPDLVSFSSLIAVFSRNRHLDQAL 278
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 135/320 (42%), Gaps = 40/320 (12%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGAL 182
AL++ D M +G + A + L+ + K + A+ F + + L D + L
Sbjct: 312 ALKIRDEMLEQGCVLDVIAYNTI--LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 369
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
++ + + A L M + + YN ++ + K+ E ++ + M + I
Sbjct: 370 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 429
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
+ +Y I +++ S G + ++++M ++K + P T +T+ Y + G KA+
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFRLWDVM-IEKGIKPTLVTCNTVIKGYCRSGDSSKAD 488
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
E L R+ ++ D + Y+ L++ + ++ + +W
Sbjct: 489 EFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAF-LW---------------------- 525
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
I MEK E L +Y N++M+ + ++G +AE +IE+G P+
Sbjct: 526 -----INKMEK--EGLLPDIITY-----NVVMNGFCRQGRMQEAELVLRKMIEKGINPDR 573
Query: 423 TSWETLAEGHIRERRILEAL 442
+++ L GH+ + + EA
Sbjct: 574 STYTALINGHVTQDNLNEAF 593
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
++ Y R+ A+ + +M KG A + YN ++ +++ D+ +++M+++
Sbjct: 473 TVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKE 532
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G+ D+ +YN+ ++ QG ++ E V M ++K +NP+ +T++ + ++ + +
Sbjct: 533 GLLPDIITYNVVMNGFCRQGRMQEAELVLRKM-IEKGINPDRSTYTALINGHVTQDNLNE 591
Query: 301 A----EESLRR 307
A +E L+R
Sbjct: 592 AFRFHDEMLQR 602
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 91/228 (39%), Gaps = 11/228 (4%)
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
N F + Y++ ++ + E+ R + S+ V + SL G + K + V W
Sbjct: 47 NNLVFDLLIRTYVQARKLREGTEAFRILRSK---GYLVSINACNSLLGGLVKIDWVELAW 103
Query: 341 NLYRSVFPGVTNLGYHA---MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
++R V L + M+++L + G + ++ E D N ++ Y
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSW 457
+EG ++A NS+ ++G KP+ ++ + G ++ R A KG
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARA----KGILIEMLNIGL 219
Query: 458 RPKPVNVINFF-KACEEESDMGSKEAFVALLRQPGYRKEKDYMSLIGL 504
P ++C ++ +KE F +LRQ + SLI +
Sbjct: 220 SPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAV 267
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 148/323 (45%), Gaps = 9/323 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGE-RFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP 170
+VK L +++ AL V++W+ NR E L+ S A+ + ++ K V++A +L
Sbjct: 133 IVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLC 192
Query: 171 DTLKDRRVYG--ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EY 227
D VY +++ A+ A ++ KM + G + YNV++ +Y K+ +
Sbjct: 193 KDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPW 252
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
+++ +V MK GI D Y+YN +S C E+ GV + MK+ +P+ T++
Sbjct: 253 NKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKL-AGFSPDKVTYNA 311
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRS 345
+ +Y K + ++A E L+ +E V Y+ L+S Y G E+ + N + +
Sbjct: 312 LLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKG 371
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ P V Y ++S + G + +IFEE + + N ++ + G F +
Sbjct: 372 IKPDV--FTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTE 429
Query: 406 AEAFFNSIIEEGGKPNSTSWETL 428
F I P+ +W TL
Sbjct: 430 MMKVFEDIKTFQCSPDIVTWNTL 452
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 159/349 (45%), Gaps = 18/349 (5%)
Query: 89 GSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI 148
+AS+L++ K G + + ++ RY+ A+ V+ M G + L I
Sbjct: 183 AAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTL------I 236
Query: 149 QLDLIAKVHG-VASAEDFFLSLPDTLK------DRRVYGALLNAYVRARMRGNAELLIDK 201
++I V+G + + + L D +K D Y L++ R + A ++ +
Sbjct: 237 TYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKE 296
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
M+ G++ + YN ++ +Y K + E ++ EM+ G + +YN +S+ G
Sbjct: 297 MKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDG- 355
Query: 262 TEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
+E EL V+K + P+ T++T+ + + K G+ + A + + + +
Sbjct: 356 --LLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICT 413
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
++ L+ ++G+ GK E+ +V+ ++ + ++ ++S + G + +F+E
Sbjct: 414 FNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMK 473
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ N ++S Y + G+FD+A A + ++E G P+ +S+ +
Sbjct: 474 RAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAV 522
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y ALL+ Y ++R A ++ +M G + YN +++ Y + ++ +
Sbjct: 305 DKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELK 364
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M EKGI+ DV++Y LS G + +FE M+ ++ PN TF+ + M+
Sbjct: 365 NQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMR-NEGCKPNICTFNALIKMHGN 423
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNL 353
G+ + + +++ D V ++ LLS++G G EV V+ + R+ F +
Sbjct: 424 RGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDT 483
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
++ +ISS +R G + +++ L + D N +++ + G + ++E +
Sbjct: 484 -FNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEM 542
Query: 414 IEEGGKPNSTSWETLAEGHIRERRI 438
+ KPN ++ +L + + I
Sbjct: 543 KDGRCKPNELTYCSLLHAYANGKEI 567
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 147/356 (41%), Gaps = 15/356 (4%)
Query: 65 FERRP-MIKWNAIFRKLSLMDNPQLGS--ASVLNDWEKGGRSLTKWELCRVVKELRKFRR 121
F+ P ++ WN + LS+ + S + V + ++ G + ++ +
Sbjct: 440 FQCSPDIVTWNTL---LSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGS 496
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVY 179
+ A+ VY M G LS+ +A L +A+ +E + D + Y
Sbjct: 497 FDQAMAVYKRMLEAGVNPDLSSYNAV--LAALARGGLWKQSEKVLAEMKDGRCKPNELTY 554
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
+LL+AY + L +++ ++ ++ + K E E E+++
Sbjct: 555 CSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQ 614
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+G D+ + N +S G + K + + MK P+ TT++++ MY + E
Sbjct: 615 RGFSPDITTLNAMVSIYGRRQMVAKANEILDCMK-RGGFTPSLTTYNSLMYMYSRSANFE 673
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
++EE LR + ++ D + Y+ ++ Y G+ + RV + R P + Y+ I
Sbjct: 674 RSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFI 733
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSI 413
+S A D +E I +K P + N ++ WY K D+A F N++
Sbjct: 734 ASYA--ADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNL 787
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 142/369 (38%), Gaps = 64/369 (17%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHG--------VASAEDF--FLSLPDT 172
K A+++++ M N G + + +A I K+HG + ED F PD
Sbjct: 393 KAAVQIFEEMRNEGCKPNICTFNALI------KMHGNRGKFTEMMKVFEDIKTFQCSPDI 446
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ + LL+ + + M + +M+ G+ +N +++ Y + +D+ +
Sbjct: 447 V----TWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMA 502
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ M E G+ D+ SYN L++ G ++ E V MK D PN T+ ++ Y
Sbjct: 503 VYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMK-DGRCKPNELTYCSLLHAY 561
Query: 293 IKMGQVEK-----------------------------------AEESLRRVESRITGRDR 317
++E+ E + + R D
Sbjct: 562 ANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDI 621
Query: 318 VPYHYLLSLYGS---VGKKEEVYRVWNLYRSVF-PGVTNLGYHAMISSLARIGDIEGMEK 373
+ ++S+YG V K E+ + R F P +T Y++++ +R + E E+
Sbjct: 622 TTLNAMVSIYGRRQMVAKANEILDC--MKRGGFTPSLTT--YNSLMYMYSRSANFERSEE 677
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
I E L+ D N ++ Y + G A + + E G P+ ++ T +
Sbjct: 678 ILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYA 737
Query: 434 RERRILEAL 442
+ +EA+
Sbjct: 738 ADSMFVEAI 746
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 1/177 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D A+++ Y R +M A ++D M+ G+ YN +M +Y + ++ E ++
Sbjct: 620 DITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEIL 679
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KGIR D+ SYN + + G V M+ + P+ T++T Y
Sbjct: 680 REILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMR-ESGPAPDIITYNTFIASYAA 738
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
+A + + + ++ Y+ ++ Y + +++E N R + P ++
Sbjct: 739 DSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKLDPHIS 795
>gi|357447819|ref|XP_003594185.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483233|gb|AES64436.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 123
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 14/84 (16%)
Query: 124 HALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALL 183
H L+VYDWMNNR ERF++ ASDA IQLDLIA+VHG++ ++R YGALL
Sbjct: 31 HVLQVYDWMNNRPERFKIYASDAVIQLDLIARVHGIS--------------NKRTYGALL 76
Query: 184 NAYVRARMRGNAELLIDKMRDKGY 207
NAYV +R + AE L D MR KGY
Sbjct: 77 NAYVHSRSKEKAESLPDIMRSKGY 100
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 202/456 (44%), Gaps = 25/456 (5%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
+ KLS + P GS + D K SL + L V KE + ++ +L ++ +M
Sbjct: 83 TLINKLSSL--PPRGSIARCLDVFKNKLSLNDFAL--VFKEFAQRGDWQRSLRLFKYMQ- 137
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYG--ALLNAYVRARMR 192
R + + I + ++ + + ++ F +P V+ AL+NAY R
Sbjct: 138 RQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQY 197
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNI 251
++ L+D+M+ + + L YN ++ + +++E+ + ++M+ +GI+ D+ +YN
Sbjct: 198 KSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNT 257
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
LS+C +G ++ E VF M + + P+ TT+S + + K+ ++EK E L+ +ES
Sbjct: 258 LLSACARRGLGDEAEMVFRTMN-EGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESG 316
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
+ D Y+ LL + G +E V+ + Y +++ R G + +
Sbjct: 317 GSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDV 376
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL--A 429
+F E + + N++++ + + G F + F+ ++EE +PN ++E L A
Sbjct: 377 RDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFA 436
Query: 430 EG-------------HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESD 476
G H+ E+ ++ + G A G + + + N +
Sbjct: 437 CGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPT 496
Query: 477 MGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAEN 512
+ + + + + + G KE + + L+ + VA N
Sbjct: 497 VETYNSLIQMFAKGGLYKESEAI-LLKMGQSGVARN 531
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 117/254 (46%), Gaps = 20/254 (7%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+ Y ++ AY +A + A + + M + G YN ++ ++ K Y E E+++ +
Sbjct: 463 KAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLK 522
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKM 295
M + G+ + ++N + + G E E + ++++KA +P+ T + ++Y
Sbjct: 523 MGQSGVARNRDTFNGVIEAFRQGGQFE--EAIKAYVEMEKARCDPDEQTLEAVLSVYCFA 580
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-VTNLG 354
G VE++EE +++ + Y +L++Y + ++ ++ L +F V+N+
Sbjct: 581 GLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQ---LLDEMFTNRVSNI- 636
Query: 355 YHAMISSLARIGDIEG------MEKIFEEWLSVKSSYDPRIANLMMS--WYVKEGNFDKA 406
H +I + R GD + +E +FE+ S S R N ++ W++ G ++A
Sbjct: 637 -HQVIGQMIR-GDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWL--GQKERA 692
Query: 407 EAFFNSIIEEGGKP 420
N + G P
Sbjct: 693 TRVLNEATKRGLFP 706
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 165/374 (44%), Gaps = 6/374 (1%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
+ +NAI L L + VL++ K G S ++ E + A ++
Sbjct: 428 VFTYNAIINGLC-KTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 486
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYV 187
D M ++G L + A I L++K + A +F + + D +Y L+ +
Sbjct: 487 DEMPSQGVVPDLVSFSALI--GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFC 544
Query: 188 RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY 247
R + A + D+M ++G + + YN ++ K K E + + +EM E+G+ D Y
Sbjct: 545 RNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 604
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
++ ++ G+ K +FE+M + + + P+ T++T+ + K ++EK E
Sbjct: 605 TFTTLINGYXKDGNMNKAVTLFEMM-IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 663
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD 367
+ SR + + Y L++ Y ++G E +R+W+ T + + ++ R G+
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 723
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
++ L D N +++ ++KE N D+A A N + G P+ ++
Sbjct: 724 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 783
Query: 428 LAEGHIRERRILEA 441
+ G R+ R+ EA
Sbjct: 784 ILNGFSRQGRMQEA 797
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 3/289 (1%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
I ++ + K + + + F + + D Y L+NAY R + A L+D M K
Sbjct: 363 IMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 422
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G YN ++ K +Y + ++ EM + G+ D +YNI L C +
Sbjct: 423 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 482
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E +F+ M + V P+ +FS + + K G +++A + R +++ D V Y L+
Sbjct: 483 ERIFDEMP-SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 541
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+ G E +V + + + Y+ +++ L + + +++F E
Sbjct: 542 GFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 601
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
D +++ Y K+GN +KA F +I+ KP+ ++ TL +G +
Sbjct: 602 DFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 650
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 111/240 (46%), Gaps = 9/240 (3%)
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G V+ N+M+ K ++ + +S +S+M+EKG+ DV +YN +++ QG +
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG---LL 409
Query: 266 EGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
E FELM K + P T++ + K G+ +A+ L + D Y+ L
Sbjct: 410 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 469
Query: 324 LSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
L + R+++ S V P + + + A+I L++ G ++ K F + +
Sbjct: 470 LVECCRNDNMMDAERIFDEMPSQGVVPDL--VSFSALIGLLSKNGCLDQALKYFRDMKNA 527
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ D I +++ + + G +A + ++E+G + ++ T+ G +E+ + EA
Sbjct: 528 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEA 587
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
++ Y RA A+ + M KG + YN ++ ++K + D ++V++M+
Sbjct: 713 TIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENS 772
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G+ DV +YN+ L+ QG ++ E + L +++ VNP+ +T++++ ++ +++
Sbjct: 773 GLLPDVITYNVILNGFSRQGRMQEAELIM-LKMIERGVNPDRSTYTSLINGHVTQNNLKE 831
Query: 301 AEESLRRVESRITGRDRVP 319
A RV + R VP
Sbjct: 832 A----FRVHDEMLQRGFVP 846
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 158 GVASAEDFFLS---LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPY 214
G A D FLS L + D Y L+N +++ A L++KM + G + Y
Sbjct: 722 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 781
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSY 249
NV++ + + E E ++ +M E+G+ D +Y
Sbjct: 782 NVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTY 816
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 165/374 (44%), Gaps = 6/374 (1%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
+ +NAI L L + VL++ K G S ++ E + A ++
Sbjct: 324 VFTYNAIINGLC-KTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 382
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYV 187
D M ++G L + A I L++K + A +F + + D +Y L+ +
Sbjct: 383 DEMPSQGVVPDLVSFSALI--GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFC 440
Query: 188 RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY 247
R + A + D+M ++G + + YN ++ K K E + + +EM E+G+ D Y
Sbjct: 441 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 500
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
++ ++ G+ K +FE+M + + + P+ T++T+ + K ++EK E
Sbjct: 501 TFTTLINGYSKDGNMNKAVTLFEMM-IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 559
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD 367
+ SR + + Y L++ Y ++G E +R+W+ T + + ++ R G+
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
++ L D N +++ ++KE N D+A A N + G P+ ++
Sbjct: 620 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 679
Query: 428 LAEGHIRERRILEA 441
+ G R+ R+ EA
Sbjct: 680 ILNGFSRQGRMQEA 693
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 3/289 (1%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
I ++ + K + + + F + + D Y L+NAY R + A L+D M K
Sbjct: 259 IMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 318
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G YN ++ K +Y + ++ EM + G+ D +YNI L C +
Sbjct: 319 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 378
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E +F+ M + V P+ +FS + + K G +++A + R +++ D V Y L+
Sbjct: 379 ERIFDEMP-SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 437
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+ G E +V + + + Y+ +++ L + + +++F E
Sbjct: 438 GFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 497
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
D +++ Y K+GN +KA F +I+ KP+ ++ TL +G +
Sbjct: 498 DFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 546
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 111/240 (46%), Gaps = 9/240 (3%)
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G V+ N+M+ K ++ + +S +S+M+EKG+ DV +YN +++ QG +
Sbjct: 249 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG---LL 305
Query: 266 EGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
E FELM K + P T++ + K G+ +A+ L + D Y+ L
Sbjct: 306 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 365
Query: 324 LSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
L + R+++ S V P + + + A+I L++ G ++ K F + +
Sbjct: 366 LVECCRNDNMMDAERIFDEMPSQGVVPDL--VSFSALIGLLSKNGCLDQALKYFRDMKNA 423
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ D I +++ + + G +A + ++E+G + ++ T+ G +E+ + EA
Sbjct: 424 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 483
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
++ Y RA A+ + M KG + YN ++ ++K + D ++V++M+
Sbjct: 609 TIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENS 668
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G+ DV +YN+ L+ QG ++ E + L +++ VNP+ +T++++ ++ +++
Sbjct: 669 GLLPDVITYNVILNGFSRQGRMQEAELIM-LKMIERGVNPDRSTYTSLINGHVTQNNLKE 727
Query: 301 AEESLRRVESRITGRDRVP 319
A RV + R VP
Sbjct: 728 A----FRVHDEMLQRGFVP 742
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 158 GVASAEDFFLS---LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPY 214
G A D FLS L + D Y L+N +++ A L++KM + G + Y
Sbjct: 618 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 677
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSY 249
NV++ + + E E ++ +M E+G+ D +Y
Sbjct: 678 NVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTY 712
>gi|357116849|ref|XP_003560189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Brachypodium distachyon]
Length = 737
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 171/383 (44%), Gaps = 16/383 (4%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQL---DLIAKVHGVASAEDFFLSLPDTLKDRRVY 179
K A E + MN +G ++ L S + I++ + + K + +E +P + +Y
Sbjct: 336 KAAWEFFQRMNRKGVKWSLDVSASLIKMFCDEGLKKEALIIQSEMERRGIPS---NTSIY 392
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
++NAY + AE L +M++KG + YN++M Y + + + VES++ EM +
Sbjct: 393 NEIVNAYCKCSQIEEAEGLFVEMKEKGLKPTIVTYNILMDAYSRRLQPEVVESLLLEMHD 452
Query: 240 KGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G++ + SYN +S+ G Q +EK E F MK D + P ++++++ Y GQ
Sbjct: 453 LGLQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKAD-GIKPTSSSYTSLLCAYAVNGQY 511
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
EKA + ++ Y LL ++ G +++ W + G T + +H +
Sbjct: 512 EKAHITYVDMKKERLKPSLETYTALLDIFRRAGDTDKLMETWRSMINEKVGGTRVTFHMV 571
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ LA+ G + E+ ++ N++M+ Y K G K +
Sbjct: 572 LDGLAKYGLYVQARDVIYEFGNIGLPPTTMTYNILMNTYAKGGQHYKLPQLLKEMSALEL 631
Query: 419 KPNSTSWETLAEGHIRERRILEALSCLKGAFAA---EGAKSWRPKPVNVINFFKACEEES 475
KP+S ++ T+ + R R +A K + AKS++ ++N
Sbjct: 632 KPDSVTYSTMIYAYARVRDFSKAFYYHKQMVRSGQVPDAKSYK----KLLNTLDVKSARK 687
Query: 476 DMGSKEAFVALLR-QPGYRKEKD 497
++ K A V +++ + G++ K+
Sbjct: 688 NIKDKSAIVGVIKGKSGFKHRKE 710
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 167/377 (44%), Gaps = 7/377 (1%)
Query: 68 RPMI-KWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHAL 126
+P + +NAI L L + VL++ K G S ++ E + A
Sbjct: 164 KPCVFTYNAIINGLC-KTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 222
Query: 127 EVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLN 184
++D M ++G L + A I L++K + A +F + + D +Y L+
Sbjct: 223 RIFDEMPSQGVVPDLVSFSALI--GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 280
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
+ R + A + D+M ++G + + YN ++ K K E + + +EM E+G+
Sbjct: 281 GFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 340
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
D Y++ ++ G+ K +FE+M + + + P+ T++T+ + K ++EK E
Sbjct: 341 DFYTFTTLINGYSKDGNMNKAVTLFEMM-IQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 399
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
+ SR + + Y L++ Y ++G E +R+W+ T + + ++ R
Sbjct: 400 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 459
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
G+ ++ L D N +++ ++KE N D+A A N + G P+ +
Sbjct: 460 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 519
Query: 425 WETLAEGHIRERRILEA 441
+ + G R+ R+ EA
Sbjct: 520 YNVILNGFSRQGRMQEA 536
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 3/289 (1%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
I ++ + K + + + F + + D Y L+NAY R + A L+D M K
Sbjct: 102 IMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 161
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G YN ++ K +Y + ++ EM + G+ D +YNI L C +
Sbjct: 162 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 221
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E +F+ M + V P+ +FS + + K G +++A + R +++ D V Y L+
Sbjct: 222 ERIFDEMP-SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 280
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+ G E +V + + + Y+ +++ L + + +++F E
Sbjct: 281 GFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 340
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
D +++ Y K+GN +KA F +I+ KP+ ++ TL +G +
Sbjct: 341 DFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 389
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 111/240 (46%), Gaps = 9/240 (3%)
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G V+ N+M+ K ++ + +S +S+M+EKG+ DV +YN +++ QG E+
Sbjct: 92 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE- 150
Query: 266 EGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
FELM K + P T++ + K G+ +A+ L + D Y+ L
Sbjct: 151 --AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 208
Query: 324 LSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
L + R+++ S V P + + + A+I L++ G ++ K F + +
Sbjct: 209 LVECCRNDNMMDAERIFDEMPSQGVVPDL--VSFSALIGLLSKNGCLDQALKYFRDMKNA 266
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ D I +++ + + G +A + ++E+G + ++ T+ G +E+ + EA
Sbjct: 267 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 326
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
++ Y RA A+ + M KG + YN ++ ++K + D ++V++M+
Sbjct: 452 TIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENS 511
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G+ DV +YN+ L+ QG ++ E + L +++ VNP+ +T++++ ++ +++
Sbjct: 512 GLLPDVITYNVILNGFSRQGRMQEAELIM-LKMIERGVNPDRSTYTSLINGHVTQNNLKE 570
Query: 301 AEESLRRVESRITGRDRVP 319
A RV + R VP
Sbjct: 571 A----FRVHDEMLQRGFVP 585
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 158 GVASAEDFFLS---LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPY 214
G A D FLS L + D Y L+N +++ A L++KM + G + Y
Sbjct: 461 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 520
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSY 249
NV++ + + E E ++ +M E+G+ D +Y
Sbjct: 521 NVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTY 555
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 4/268 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK---EYDEVESMV 234
+Y L++AY R AE L+ +MR++G + YN ++T Y++ K ++ E ++
Sbjct: 211 IYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLI 270
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+ G+ DV ++ + L + G +G TE+ E VF MK + V PN +++ + Y +
Sbjct: 271 EEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKA-RGVQPNSYSYTALINAYAE 329
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
EKA + + + Y LL Y G E V VW + T +
Sbjct: 330 RRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVT 389
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y ++ + + G + + EE+ + D + N++++ Y++ G KA +
Sbjct: 390 YMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMK 449
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEAL 442
G P+S ++ TL G +R R +AL
Sbjct: 450 TAGFLPDSFTYCTLIYGFLRVRDQTKAL 477
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 127/268 (47%), Gaps = 6/268 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V+G + A+ A A L+ +M + + YN+++ Y ++ + +E E +++EM
Sbjct: 176 VFGTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEM 235
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKM---EGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+E+GI+ +V +YN ++ + EG+ E M+ + P+ TF+ + Y
Sbjct: 236 RERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEAS-GLYPDVVTFTMLLGAYGH 294
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G E+AE+ R+++R + Y L++ Y E+ R + + R T
Sbjct: 295 EGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVET 354
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL-MMSWYVKEGNFDKAEAFFNSI 413
Y A++ + R GD+E ++ +++ + V+ R+ + ++ + K+G + +A
Sbjct: 355 YTALLDAYRRAGDLEMVQAVWKS-MKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEF 413
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
+G KP+ + L ++R R ++A
Sbjct: 414 KNQGHKPDLMVYNMLLNSYMRGGRHVKA 441
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 122/285 (42%), Gaps = 17/285 (5%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAEL-----LIDKMRDKGYAVHSLPYNVMMTLY 221
L+ + D + L+N+ V+ G L L M +G + + + +
Sbjct: 129 LAFYEVFPDSVTFSVLMNSAVK----GGGSLKEVWALYQDMVQRGISPSVSVFGTFIKAF 184
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
E + +EM++ + +V YNI + + G G E+ EG+ M+ ++ + PN
Sbjct: 185 CDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMR-ERGIQPN 243
Query: 282 WTTFSTMATMYIKMG---QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
T++ + T Y++ Q AE + +E+ D V + LL YG G E+ +
Sbjct: 244 VGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQ 303
Query: 339 VWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSW 396
V+N ++ + Y A+I++ A E + FE + K +P + ++
Sbjct: 304 VFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFE--MIRKQGVNPTVETYTALLDA 361
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
Y + G+ + +A + S+ EG ++ T+ + ++ R EA
Sbjct: 362 YRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEA 406
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 160/334 (47%), Gaps = 9/334 (2%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP 170
+V++ L + ++ A+E + + G R + A + + +D + K V A F+
Sbjct: 205 KVMRRLARAGNFQDAVEAFRGIEKLGVRKDIEALN--VLMDALVKEGSVEHAYSAFMEFK 262
Query: 171 DTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D++ D + + LL+ Y +AR +A ++D+M +G+ + + Y + LY K+K++
Sbjct: 263 DSIHVDFQSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRN 322
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
VE++ SEM+EK + +V +Y I++ + G K V+E+MK + V P+ + +S++
Sbjct: 323 VEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCV-PDASFYSSLI 381
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVF 347
+ + G+++ A + ++ + D + Y+ +++ + ++E ++ S
Sbjct: 382 FVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCK 441
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P + Y ++ R I+ ++ + S D L++ K G + A
Sbjct: 442 PDIQT--YAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELAC 499
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+FF ++ +G P +++ L E + + + EA
Sbjct: 500 SFFEEMVMKGLIPRDRTYKMLVE-ELEQNNLTEA 532
>gi|442756193|gb|JAA70256.1| Putative chloroplast [Ixodes ricinus]
Length = 188
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 74/112 (66%), Gaps = 11/112 (9%)
Query: 33 RLHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSAS 92
+ H+++A+ + CS + GTVD+ +R ++ W+ +++KL ++ G+A+
Sbjct: 50 KTHEENAV--------FVTCSSTP---RGTVDYGKRALLNWSDVYKKLYMLKKSDSGAAA 98
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSAS 144
VL+ E G+ +TKWEL +VVKELRK +R+K ALE+Y+WMNN +RFR +++
Sbjct: 99 VLSRIENEGKKITKWELSKVVKELRKLKRFKLALEIYEWMNNMPQRFRTTSA 150
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 6/257 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESM 233
D Y AL++ + RA +A + +M D G + YNV++ +Y K+ + EV +
Sbjct: 184 DASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVL 243
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
V MKE GI LD Y+YN +S C +G + +F+ MK P+ TF+++ +Y
Sbjct: 244 VDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKA-AGFEPDKVTFNSLLDVYG 302
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVT 351
K + E+A L+++E+ V Y+ L+S Y G EE + +R + P V
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y +IS L RIG I+ + E + S + N ++ + G F + F+
Sbjct: 363 T--YTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFD 420
Query: 412 SIIEEGGKPNSTSWETL 428
+ G P+ +W TL
Sbjct: 421 DLRSAGYVPDVVTWNTL 437
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 167/389 (42%), Gaps = 63/389 (16%)
Query: 70 MIKWNAIFRKLSLMDNPQLGS--ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALE 127
++ WN + L++ L S + V + +K G + ++ + + A+E
Sbjct: 431 VVTWNTL---LAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAME 487
Query: 128 VYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNA 185
+Y M G +S +A L +A+ AE F + D D Y +LL+A
Sbjct: 488 IYKRMIEAGIYPDISTYNAV--LSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHA 545
Query: 186 YVRARMRGNAELLIDKMR---DKGYAVHSLPYN-VMMTLYM---KIKEYDEVESMVSEMK 238
Y A+ +DKM+ + YA P+N ++ TL + K+ E E E++
Sbjct: 546 YANAKK-------LDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELR 598
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ LD+ N +S G +K+E V LMK + ++N + T++++ MY ++G
Sbjct: 599 RRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMK-ENSINHSAATYNSLMHMYSRLGDC 657
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYH 356
EK E L ++S DR Y+ ++ YG G+ +E R+++ + V P + Y+
Sbjct: 658 EKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVT--YN 715
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
I S +ANLM F++A ++ +
Sbjct: 716 IFIKSY--------------------------VANLM---------FEEAIDLVRYLVAQ 740
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCL 445
G KPN ++ ++ EG+ R R++EA S L
Sbjct: 741 GCKPNERTYNSILEGYCRHGRMVEAKSFL 769
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 123/271 (45%), Gaps = 3/271 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ + +LL+ Y +AR A ++ KM + G + YN +++ Y+K +E +
Sbjct: 290 DKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELK 349
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+ +G++ DV +Y +S G + + M V +PN T++ + M+
Sbjct: 350 QEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEM-VRNGCSPNLCTYNALIKMHGV 408
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+ + + S D V ++ LL+++G G EV V+ +
Sbjct: 409 RGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 468
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y ++ISS +R G + +I++ + D N ++S + G + +AE F +
Sbjct: 469 YVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEME 528
Query: 415 EEGGKPNSTSWETLAEGHIRERRI--LEALS 443
+ KP+ S+ +L + +++ ++ALS
Sbjct: 529 DRDCKPDELSYSSLLHAYANAKKLDKMKALS 559
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 94/190 (49%), Gaps = 1/190 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D V A+++ Y + +M E ++ M++ + YN +M +Y ++ + ++ E+++
Sbjct: 605 DINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAIL 664
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+E+K G+R D YSYN + + G +G ++ +F MK V P+ T++ Y+
Sbjct: 665 TEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS-GVKPDIVTYNIFIKSYVA 723
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
E+A + +R + ++ + Y+ +L Y G+ E + ++PG++
Sbjct: 724 NLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNLPKIYPGISKEE 783
Query: 355 YHAMISSLAR 364
H ++ LA+
Sbjct: 784 KHRLLELLAK 793
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 8/292 (2%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D R Y +++A + R A L +MR++G + Y VM+ K + +E
Sbjct: 69 DCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEG 128
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++ EM EKG+ V +YN + +G E + + +LM + NPN T++ +
Sbjct: 129 RRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMH-SNSCNPNERTYNELIC 187
Query: 291 MYIKMGQVEKAEESLRR-VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVF 347
+ + V +A L + +ESR+T V Y+ L+ +G + YR+ NL V
Sbjct: 188 GFCRKKNVHRAMALLSKMLESRLT-PSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVV 246
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P Y I +L + G IE +F + I ++ Y K G D A
Sbjct: 247 P--DQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDAN 304
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
+ + ++ E PNS+++ L +G +ER++ EAL L + +G K P
Sbjct: 305 SLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALL-LMESMIQKGLKCTVP 355
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 176/413 (42%), Gaps = 29/413 (7%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+LN + G +W + L K R + A +++ + +G + ++ I L
Sbjct: 236 LLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIK-----ANEVIYTAL 290
Query: 153 I------AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
I K+ S D L+ D L + Y AL++ + R A LL++ M KG
Sbjct: 291 IDGYCKAGKMDDANSLLDRMLT-EDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
Y +++ +K ++D ++ +M G + DVY Y ++ + ++G+ ++ E
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
+ +M ++ V P+ T++ + Y +G + A + L+R+ TG D P H+ S
Sbjct: 410 DMMSMM-FERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFD--TGCD--PSHHTYSC 464
Query: 327 YGSVGKKEEV---YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
KEE+ Y+ L S+ P V + A ++ + ++ E ++FE+ L
Sbjct: 465 LIKHLLKEELTKKYKNVALCDSI-PNV----FFADVADVWKMMKFETALELFEKMLEHGC 519
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
S + ++ K G A+ F+ + E G P+ + +L +A+
Sbjct: 520 SPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVR 579
Query: 444 CLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEK 496
L GA G + +NV+ F EE S +K F LL Q GY ++
Sbjct: 580 -LVGAMMEHGHLPLL-ESLNVL-FCGLYEEGSKEKAKVVFSNLL-QCGYNDDE 628
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 114/261 (43%), Gaps = 7/261 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ R Y L+ + R + A L+ KM + + YN ++ KI D ++
Sbjct: 178 NERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLL 237
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M E G+ D ++Y++++ + +G E+ +F +K +K + N ++ + Y K
Sbjct: 238 NLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLK-EKGIKANEVIYTALIDGYCK 296
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP---GVT 351
G+++ A L R+ + + Y+ L+ + K+ +V L S+ T
Sbjct: 297 AGKMDDANSLLDRMLTEDCLPNSSTYNALID---GLCKERKVQEALLLMESMIQKGLKCT 353
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y +I ++ + GD + +I ++ +S D I + + GN +AE +
Sbjct: 354 VPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMS 413
Query: 412 SIIEEGGKPNSTSWETLAEGH 432
+ E G P++ ++ + + +
Sbjct: 414 MMFERGVMPDALTYTLVIDAY 434
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 88/205 (42%), Gaps = 5/205 (2%)
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
S+ + M +KG R + SY + G ++ +F+ M+ D P T++ +
Sbjct: 25 SVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCY-PTVRTYTVIVHA 83
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
+ G+ +A + R + Y +++ K EE R+ + + + + P
Sbjct: 84 LFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPS 143
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
V Y+A+I + G +E ++I + S + + R N ++ + ++ N +A A
Sbjct: 144 VPT--YNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMAL 201
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIR 434
+ ++E P+ ++ +L G +
Sbjct: 202 LSKMLESRLTPSVVTYNSLIHGQCK 226
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 159/379 (41%), Gaps = 44/379 (11%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K + A V+ M +RG + + I D + K + AE F + D
Sbjct: 301 IIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTII--DGLCKAQAIDKAEGVFQQMID 358
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D Y +++ +A+ AE + +M DKG ++ YN ++ Y+ +++E
Sbjct: 359 KGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEE 418
Query: 230 VESMVSEMK-----------------------------------EKGIRLDVYSYNIWLS 254
V + EM KGI+ V Y I L
Sbjct: 419 VVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLH 478
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
G +G+ +M + LM V ++PN F+T+ Y K +++ +++ +
Sbjct: 479 GYGKKGALSEMHDLLNLM-VANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLS 537
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT--NLGYHAMISSLARIGDIEGME 372
+ V Y L+ +G+ ++ +N + + GVT N+ +++++ L + E +E
Sbjct: 538 PNVVTYGTLIDALCKLGRVDDAVLQFN--QMINEGVTPNNVVFNSLVYGLCTVDKWEKVE 595
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
++F E L+ D N ++ KEG +A +S++ G KP+ S+ TL +GH
Sbjct: 596 ELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGH 655
Query: 433 IRERRILEALSCLKGAFAA 451
R+ EA+ L G +A
Sbjct: 656 CFASRMDEAVKLLDGMVSA 674
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 140/330 (42%), Gaps = 38/330 (11%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDT-LKDRRV-YGALLNAYVRARMRGNAELLIDKMRDKGY 207
+D + K V AED F + + +K V Y +++ +A+ AE + KM DKG
Sbjct: 232 IDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGV 291
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
++ YN ++ K + D E + +M ++G++ D +YN + + +K EG
Sbjct: 292 KPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEG 351
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
VF+ M +DK V P+ T++ + K V++AE +++ + + Y+ L+ Y
Sbjct: 352 VFQQM-IDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGY 410
Query: 328 GSVGKKEEVYR----------------------------VWNLYRSVFPGVTNLG----- 354
S G+ EEV + N RS+F + G
Sbjct: 411 LSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSV 470
Query: 355 --YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y M+ + G + M + ++ S + RI N ++ Y K D+ F
Sbjct: 471 TIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ ++G PN ++ TL + + R+ +A+
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 131/280 (46%), Gaps = 14/280 (5%)
Query: 159 VASAEDFFLSL---PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
V A FL + PD + Y +++ +A+ AE + +M +KG +++ YN
Sbjct: 209 VDKAYSLFLEMGVSPDVV----TYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYN 264
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ K +E D E + +M +KG++ +YN + + ++ EGVF+ M +D
Sbjct: 265 TIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM-ID 323
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ V P+ T++T+ K ++KAE +++ + D + Y ++ + K +
Sbjct: 324 RGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIID---GLCKAQS 380
Query: 336 VYRVWNLYRSVF-PGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
V R +++ + GV N Y+ +I G E + + +E + D L
Sbjct: 381 VDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGL 440
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
++ + K G ++A + F+S+I +G KP+ T + + G+
Sbjct: 441 LLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGY 480
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 13/261 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKM---RDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
Y LL R A L+ M +D + + YN+++ + + D+ S+
Sbjct: 158 YNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFL 217
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM G+ DV +YN + ++ E VF+ M V+K V PN T++T+ K
Sbjct: 218 EM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQM-VEKGVKPNNVTYNTIIDGLCKA 273
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP-GV--TN 352
+V+ AE +++ + V Y+ ++ + K + V R +++ + GV +
Sbjct: 274 QEVDMAEGVFQKMVDKGVKPSNVTYNTIID---GLCKAQAVDRAEGVFQQMIDRGVKPDH 330
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+ +I L + I+ E +F++ + D +++ K + D+AE F
Sbjct: 331 VTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQ 390
Query: 413 IIEEGGKPNSTSWETLAEGHI 433
+I++G KPN+ ++ L G++
Sbjct: 391 MIDKGVKPNNGTYNCLIHGYL 411
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 130/304 (42%), Gaps = 41/304 (13%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG L++A + +A L ++M ++G +++ +N ++ + ++++VE + EM
Sbjct: 543 YGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEML 602
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+GIR D+ +N L + +G + + + M V + P+ +++T+ + ++
Sbjct: 603 NQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM-VCMGLKPDVISYNTLIDGHCFASRM 661
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
++A + L + S + V Y+ LL Y G+ + Y ++ L + V PGV Y+
Sbjct: 662 DEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVET--YN 719
Query: 357 AMISSLARIGDI-EGME----------------------------------KIFEEWLSV 381
+++ L R G E E KIF+ S+
Sbjct: 720 TILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSM 779
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D N+M+ K G + A F +I G P+ ++ +AE I E LE
Sbjct: 780 DLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGS-LEE 838
Query: 442 LSCL 445
L CL
Sbjct: 839 LDCL 842
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 109/271 (40%), Gaps = 15/271 (5%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y L++ + A A L+D M G + + YN ++ Y K D
Sbjct: 643 PDVIS----YNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDN 698
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAVNPNWT--TFS 286
+ EM KG+ V +YN L+ G +E E ++K K W+ T+S
Sbjct: 699 AYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKL----WSICTYS 754
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--R 344
+ + K ++A + + + S D + ++ ++ G+KE+ ++
Sbjct: 755 IILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPAN 814
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ P V Y + +L G +E ++ +F ++ + + N ++ + G
Sbjct: 815 GLVPSVVT--YRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIP 872
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+A A+ + + E+ +++ L RE
Sbjct: 873 RAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 172/387 (44%), Gaps = 44/387 (11%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P A VL+D + +T + C VVK + + ++ ALEV++W+N R + +A
Sbjct: 124 PDQFVADVLDDSKV---QMTPTDFCFVVKWVGQ-ENWQRALEVFEWLNLR-HWYSPNARM 178
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDR-RVYGALLNAYVRARMRGNAELLIDKMRD 204
A L ++ K + A A + F+ T+ + +VY A++ Y R + ++D MR+
Sbjct: 179 LATILAVLGKANQEALAVEIFIRAESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRE 238
Query: 205 KGYAVHSLPYNVMMTLYMKIKEY--DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST 262
+G + +N ++ +K + +++E++ G+R D+ +YN +S+C + +
Sbjct: 239 RGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNL 298
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
E+ VF+ M+ P+ T++ M ++Y + G KAE+ + +ES+ D V Y+
Sbjct: 299 EEAVKVFDDMEA-HYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNS 357
Query: 323 LLSLYGSVGKKEEVYRVWN--------------------------------LYRSV-FPG 349
LL + G ++V + N LYR + G
Sbjct: 358 LLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSG 417
Query: 350 VT--NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
T + Y +I SL + + + E L++ R + ++ Y + G +AE
Sbjct: 418 RTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAE 477
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIR 434
F+ + G +P+ ++ + + +R
Sbjct: 478 ETFDCMRRSGIRPDQLAYSVMLDVFLR 504
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/356 (18%), Positives = 147/356 (41%), Gaps = 8/356 (2%)
Query: 73 WNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWM 132
WNA+ + + + A V N + G S T + +++ L R + V +
Sbjct: 773 WNALIQAYAASGCYEQARA-VFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEI 831
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRAR 190
+ G F++S S + LD A+V +A A+ + + +Y ++ + +
Sbjct: 832 QDMG--FQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGK 889
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
+ E ++ +M + G+ +N M+ LY I ++ + + +KE G++ D +YN
Sbjct: 890 RVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYN 949
Query: 251 -IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
+ + C E + E+ ++ + P T+ ++ + K V AEE +
Sbjct: 950 TLIVMYCRDHRPEEGCSLMHEMRRI--GLEPKLDTYKSLIAAFGKQQLVVDAEELFEELL 1007
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
S+ + DR YH ++ +Y + G + ++ ++ + T H ++ S G +
Sbjct: 1008 SKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQ 1067
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
EK+ + S + ++ Y+K ++ + +EG +P+ W
Sbjct: 1068 EAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIW 1123
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 36/247 (14%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
+L+A+ R A+ + M+ GY Y +M+ L K K +VE+MV+EM+E G
Sbjct: 846 ILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAG 905
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
R D+ +N L K +++ +K D + P+ T++T+ MY
Sbjct: 906 FRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKED-GLQPDEDTYNTLIVMYC-------- 956
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
RD P EE + + R + Y ++I++
Sbjct: 957 -------------RDHRP--------------EEGCSLMHEMRRIGLEPKLDTYKSLIAA 989
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
+ + E++FEE LS S D ++MM Y GN KAE + + + G +P
Sbjct: 990 FGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPT 1049
Query: 422 STSWETL 428
+ L
Sbjct: 1050 IATMHLL 1056
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 40/254 (15%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A+++ Y R G AE L ++ KGY ++ YN ++ + + D+V+ + +EM
Sbjct: 319 TYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEM 378
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGS---------TEKMEG-----------VFELMKVDK- 276
+ G D +YN + G QG K+ G + L K +K
Sbjct: 379 VQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKM 438
Query: 277 -------------AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
V P T+S + Y + GQ +AEE+ + D++ Y +
Sbjct: 439 VEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVM 498
Query: 324 LSLYGSVGKKEEVYRVWNLYRS-VFPGVT--NLGYHAMISSLARIGDIEGMEKIFEEWLS 380
L ++ + +E + LYR V G+T Y AM+ +L R +E +++I +
Sbjct: 499 LDVF---LRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEE 555
Query: 381 VKSSYDPRIANLMM 394
V IA++++
Sbjct: 556 VCGMNPQAIASILV 569
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 118/278 (42%), Gaps = 16/278 (5%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV-MMTLYMKIKEYDEVESMV 234
+ +Y +++ Y + A LID +G + +V ++ Y K+K + + ES+V
Sbjct: 699 KSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLV 758
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++++ +D +N + + + G E+ VF M D +P + + + I
Sbjct: 759 GNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRD-GPSPTVDSINGLLQALIV 817
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV--FPGVTN 352
G++E+ + ++ + +L + V E +++ ++ FP T
Sbjct: 818 DGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFP--TM 875
Query: 353 LGYHAMISSLA---RIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAE 407
Y MI L R+ D+E M EE + + P ++ N M+ Y +F K
Sbjct: 876 HLYRIMIGLLCKGKRVRDVEAMVTEMEE-----AGFRPDLSIWNSMLRLYTGIDDFRKTV 930
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ I E+G +P+ ++ TL + R+ R E S +
Sbjct: 931 QIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLM 968
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y AL+ Y RA R AE D MR G L Y+VM+ ++++ E + + E
Sbjct: 458 RTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYRE 517
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M GI D Y L + G + E ++ + M+ +NP +A++ +K
Sbjct: 518 MVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMNPQ-----AIASILVKGE 572
Query: 297 QVEKAEESLRRVESRITGRDRV 318
E A LR I+G D +
Sbjct: 573 CYEDAAGMLRLA---ISGSDEI 591
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 71/167 (42%), Gaps = 1/167 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
++D Y +++ Y + G A L M+ G ++ Y V++ K + E +
Sbjct: 384 IRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAAN 443
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
++SEM G++ + +Y+ + G + E F+ M+ + P+ +S M ++
Sbjct: 444 VMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMR-RSGIRPDQLAYSVMLDVF 502
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
++ + KA R + D Y +L G K E++ R+
Sbjct: 503 LRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRI 549
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL---Y 327
++ + V+ ++ M +Y + G+ K + L + R D V ++ L++
Sbjct: 199 FIRAESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKA 258
Query: 328 GSVGKKEEVYRVWNLYRS-VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
G++ + + + RS + P + + Y+ +IS+ +R ++E K+F++ + D
Sbjct: 259 GAMTPNVAIELLNEVRRSGLRPDI--ITYNTLISACSRESNLEEAVKVFDDMEAHYCQPD 316
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
N M+S Y + G KAE F + +G P++ ++ +L RE +
Sbjct: 317 LWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNV 368
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 153/332 (46%), Gaps = 10/332 (3%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDW----MNNRGERFRLSASDAAIQLDLIAKVHGV 159
L + +L ++K L ++ AL +++W + E+ A + +++ H V
Sbjct: 146 LLQVDLISLLKALDYSGNWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTV 205
Query: 160 ASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AS + L D + D R Y +L+AY R A + ++M + G + + YNVM+
Sbjct: 206 ASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLD 265
Query: 220 LYMKI-KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
+Y K+ + +D++ ++ EM+ +G+ D ++ + LS+CG +G ++ F +K +
Sbjct: 266 VYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLK-SEGY 324
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
P T++ + ++ K G +A L +E D V Y+ +++ Y G EE
Sbjct: 325 KPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAV 384
Query: 339 VWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
V + S + P Y +I++ R+GDI+ ++F++ + + + N ++
Sbjct: 385 VIDAMASKGIMPNAVT--YTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGM 442
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
K+ ++ + G PN +W T+
Sbjct: 443 LGKKSLSEEMMKILGHMKLNGCSPNHITWNTM 474
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 7/289 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++ AYVRA ++ID M KG +++ Y ++ Y ++ + D+ M
Sbjct: 362 DAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMF 421
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M E G +V +YN L G + +E+M + MK++ +PN T++TM M K
Sbjct: 422 DQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLN-GCSPNHITWNTMLAMCGK 480
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFPGVTNL 353
G + + R +++ DR ++ L+S YG G + ++ + ++ F N
Sbjct: 481 KGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINT 540
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+A++++LAR GD + E + + + +LM+ Y K GN E SI
Sbjct: 541 -YNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSI 599
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
+ P+ TL + + R +L+ ++ AF A ++P V
Sbjct: 600 YDGDIFPSWMLLRTLVLANFKCR----SLTGMERAFQALQKHGYKPDLV 644
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 125/307 (40%), Gaps = 44/307 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR + L++AY R +A + ++M G++ YN ++ + ++ ES++
Sbjct: 502 DRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVI 561
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST------- 287
+M+ KG R SY++ + S G+ + +E + E D + P+W T
Sbjct: 562 LDMRNKGFRPSETSYSLMVHSYAKGGNVKGIE-MIEKSIYDGDIFPSWMLLRTLVLANFK 620
Query: 288 ----------------------------MATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
M +++ K ++A E LR + D V
Sbjct: 621 CRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVT 680
Query: 320 YHYLLSLYGSVG---KKEEVYRVWNLYRSVFPGVTNL-GYHAMISSLARIGDIEGMEKIF 375
++ L+ +Y G K EEV R+ G +L Y+ +I R G ++ +I
Sbjct: 681 HNSLMDMYARGGDCWKAEEVLRMLQ----TSGGKPDLVSYNTVIKGFCRKGLMQEGIRIL 736
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
E S+ N +S Y +G F + + +I +PN +++ +A+G+ +
Sbjct: 737 SEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKA 796
Query: 436 RRILEAL 442
RR EA+
Sbjct: 797 RRYDEAI 803
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + +L++ Y R AE ++ ++ G + YN ++ + + E ++
Sbjct: 677 DLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRIL 736
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM G+ +++YN ++S +QG ++ V M V PN T+ +A Y K
Sbjct: 737 SEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNC-RPNELTYKIVADGYCK 795
Query: 295 MGQVEKA---------------EESLRRVESRI 312
+ ++A ++S+RR+ SR+
Sbjct: 796 ARRYDEAIDFVSKIKDVDDTFGDQSVRRLVSRV 828
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 119/294 (40%), Gaps = 42/294 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG L+NA +A A D M ++G + YN++M + K+ + D +
Sbjct: 134 DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLF 193
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EMK +G + V +YNI L + S G +F M D +P+ T+ST+ K
Sbjct: 194 AEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGD-GCSPDSYTYSTLVNGLGK 252
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY----------- 343
G+VE+A + R + R D V Y+ LL+ G + RVW L
Sbjct: 253 SGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMD---RVWKLMKEMSRKGFHPD 309
Query: 344 --------------------RSVFPGVTNLG-------YHAMISSLARIGDIEGMEKIFE 376
R VF + G Y+ +I S AR GD ++ E
Sbjct: 310 AFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE 369
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
E + + + N ++ W +G D+A A + G +P+ ++ L +
Sbjct: 370 EMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMD 423
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 108/237 (45%), Gaps = 1/237 (0%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AEL+ K+ KG + YNV++ + + + D M EMK KG D Y+Y ++
Sbjct: 84 AELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVN 143
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ G G ++ F+ M +++ + PN T++ + + K+GQ++ A ++ R
Sbjct: 144 ALGKAGRVQEARSFFDAM-LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQ 202
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
V Y+ LL S G+ ++++ + Y +++ L + G +E K+
Sbjct: 203 PSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKV 262
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
F E + + D N +++ K GN D+ + +G P++ S+ T+ +
Sbjct: 263 FREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDA 319
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 144/347 (41%), Gaps = 9/347 (2%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ-- 149
++L + GR L L +++ + + A +++ N+ E F S + A
Sbjct: 16 TLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLF----NQAESFACSPTVHAFTKL 71
Query: 150 LDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+D++ AE + L DR Y L+ + R+ +A + +M+ KG
Sbjct: 72 IDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGS 131
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
Y ++ K E S M E+G+ ++ +YN+ + + G + G
Sbjct: 132 EPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALG 191
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+F MK + P+ T++ + G+V A + ++ D Y L++
Sbjct: 192 LFAEMK-RRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGL 250
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
G G+ EE ++V+ V + Y++++++LA+ G+++ + K+ +E D
Sbjct: 251 GKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDA 310
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
N +M K D A F ++E G KP+ S+ L + + R
Sbjct: 311 FSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYAR 357
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 150 LDLIAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
+D + K + +A + F + PD + Y L+++Y R A ++++M
Sbjct: 317 MDALGKANKPDAAREVFARMVESGCKPDLIS----YNILIDSYARFGDAAQARQMLEEMV 372
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
+ G+ + YN ++ + DE +++ EM+ G R DV +YN + G +G +
Sbjct: 373 EAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQ 432
Query: 264 KMEGVFELMKVDKAVNPNWTTFST 287
+ +F+ MK DK V P+ +++
Sbjct: 433 RAARLFQQMK-DKGVEPDTLSYAV 455
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 5/267 (1%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y ++++ Y + A + KM G + YN +M K E M
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M ++G++ ++ +Y L ++G+ +M G+ +LM V ++PN FS + Y K G
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM-VRNGIHPNHYVFSILICAYAKQG 388
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
+V++A ++ + D V Y ++ + G+ E+ R + + + PG N+
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG--NIV 446
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+++I SL + +++ E L D N ++ + KEG ++E F+ ++
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
G KPN ++ TL +G+ ++ EA
Sbjct: 507 RIGVKPNIITYSTLIDGYCLAGKMDEA 533
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PDT+ YG ++ ++ +A ++M D+ + ++ YN ++ ++D+
Sbjct: 407 PDTV----TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ ++ EM ++GI LD +N + S +G + E +F+LM V V PN T+ST+
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM-VRIGVKPNIITYSTLI 521
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE---VYR-------- 338
Y G++++A + L + S D V Y+ L++ Y + + E+ ++R
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581
Query: 339 ----VWNLY-------------RSVFPGVTNLG-------YHAMISSLARIGDIEGMEKI 374
+N+ + ++ G+T G Y+ ++ L + + ++
Sbjct: 582 PDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRM 641
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F+ + R N+M+ +K G D+A+ F ++ G P+ ++ +AE I
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Query: 435 E 435
+
Sbjct: 702 Q 702
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 119/277 (42%), Gaps = 46/277 (16%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D Y ++N + + G+ DK Y +
Sbjct: 194 DCPPDVVSYTTVINGFFK---EGDL--------DKAYGTY-------------------- 222
Query: 231 ESMVSEMKEKGIRLDVYSYN-IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
EM ++GI +V +YN I + C +Q + ME + ++K V PN T++++
Sbjct: 223 ----HEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVK--NGVMPNCRTYNSIV 276
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVF 347
Y GQ ++A L+++ S D V Y+ L+ G+ E ++++ R +
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLK 336
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR--IANLMMSWYVKEGNFDK 405
P +T Y ++ A G + M + + L V++ P + ++++ Y K+G D+
Sbjct: 337 PEITT--YGTLLQGYATKGALVEMHGLLD--LMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
A F+ + ++G P++ ++ T+ + R+ +A+
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 106/241 (43%), Gaps = 8/241 (3%)
Query: 205 KGYAVHSLPYNVMMT-LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGST 262
KG+ V ++ + ++ L + D ++ ++ M + G +V+SYNI L C S
Sbjct: 120 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQ 179
Query: 263 EKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
E +E + ++M D P+ +++T+ + K G ++KA + + R + V Y+
Sbjct: 180 EALE-LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYN 238
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
+++ ++ V + V P Y++++ G + ++
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT--YNSIVHGYCSSGQPKEAIGFLKKMH 296
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
S D N +M + K G +A F+S+ + G KP T++ TL +G+ + ++
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356
Query: 440 E 440
E
Sbjct: 357 E 357
>gi|224072985|ref|XP_002303946.1| predicted protein [Populus trichocarpa]
gi|222841378|gb|EEE78925.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 164/369 (44%), Gaps = 10/369 (2%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
+L+ +W+ R ++ + D A LD IAKV G+ AE F +P++ + + VY LL
Sbjct: 33 SLQFSEWLE-RSKQTDFTERDYACHLDCIAKVLGLWKAEKFIEKIPESFRGKLVYQTLLA 91
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
+ V AE + KMRD G + M+ +Y ++ E ++ +++ MK++ I+
Sbjct: 92 SCVSVLNIKKAESVFRKMRDLGLPITVEACEQMIIIYKRL-EKKKIPNILLMMKDQNIKP 150
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
+Y + + + T ME + E M+ ++ + + + +A YI +G +KA+
Sbjct: 151 SFLTYKLLIDAKCQFNDTTGMEKLVEAMR-NEGMELDVFALAVIARHYISVGLKDKADLI 209
Query: 305 LRRVESRIT-GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLA 363
L+++E R G LLSLY S+G +EV R+W ++ P + A I +
Sbjct: 210 LKQIEKRKQKGGGLGARRSLLSLYASLGNADEVGRIWKECKAD-PKQSEC--IAAIRAWG 266
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
++G +E E + E L + +++ Y+ K + + + G
Sbjct: 267 KLGKVEEAEAVSEMMLQTWKNPTFGYYTSLLNVYIDNNLTSKGKDLVEQMGDIGSWAGPL 326
Query: 424 SWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAF 483
+W+ L +I+ + +A S L K RP I + + D+ + E
Sbjct: 327 TWDALVRLYIKSGDVEKAHSIL---LKVARMKRKRPLYTTCIAVMEHYAKRGDIHNTEKL 383
Query: 484 VALLRQPGY 492
+R+ GY
Sbjct: 384 FQSMRELGY 392
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 38/301 (12%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDTL--KDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
I +++ K + A+D F S+ L + Y AL+NA+ R AE + +++
Sbjct: 202 IMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSV 261
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G+ YN ++ Y + + + + M E G+R D SYNI + + G G T
Sbjct: 262 GFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADA 321
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+ V++ MK + P + + + Y K G+V +AE +R +E+ D ++ LLS
Sbjct: 322 QAVYDSMK-EAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLS 380
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
YG+ G+ +E ME + E +S +
Sbjct: 381 AYGNSGRIDE-----------------------------------MESLLESMVSSVAKP 405
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
D N +++ Y + G +KAE FNS+ +G P+ SW +L + + + + +S
Sbjct: 406 DISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIF 465
Query: 446 K 446
+
Sbjct: 466 Q 466
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 158/367 (43%), Gaps = 34/367 (9%)
Query: 102 RSLTKWE-LCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVA 160
R + WE + V ELR+ R ++ + + +W+ +G F+ + +D K
Sbjct: 42 RGIGTWEAIMENVAELRRLRNWRSVILILEWIL-QGTMFKPDVGCFNMLIDAYGKSKQWR 100
Query: 161 SAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL------ 212
AE F + D L + LL AY R AE L +M++ Y+ ++
Sbjct: 101 EAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFS 160
Query: 213 ---PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
YN + + K + E +M+++GI V ++ I ++ G ++K + +F
Sbjct: 161 GIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLF 220
Query: 270 ELMKVDKAV-NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
M+ KA+ PN T++ + + + G +AEE ++S D Y+ LL Y
Sbjct: 221 RSMR--KALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYS 278
Query: 329 ----SVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
G KE V++ V GV + Y+ +I + R G + +++ S+K
Sbjct: 279 RGEHPTGAKE-VFQAM-----VEAGVRPDQVSYNILIDAFGRAGLTADAQAVYD---SMK 329
Query: 383 -SSYDPRIAN--LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+ + P + + L++S Y K G +AE I G KP++ + +L + RI
Sbjct: 330 EAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRID 389
Query: 440 EALSCLK 446
E S L+
Sbjct: 390 EMESLLE 396
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 158/338 (46%), Gaps = 9/338 (2%)
Query: 97 WEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR-LSASDAAIQLDLIAK 155
+++ S W++ ++K L ++ AL ++D++ R +R L+ S A+ + ++ K
Sbjct: 97 FDQPSSSSLSWDILGIIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGK 156
Query: 156 VHGVASAEDFFLSLPDTLKDRRVYG--ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
V+ A +L + VYG +L+ AY + +A + KM++ G +
Sbjct: 157 TGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLIT 216
Query: 214 YNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
YN ++ +Y K+ + ++ ++V +MK G+ D+ +YN +S C + E+ +FE +
Sbjct: 217 YNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEI 276
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
KV P+ T++ + +Y K + ++A E L+++ES V Y+ L+S Y G
Sbjct: 277 KV-AGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGL 335
Query: 333 KEE--VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
E+ V + + + + P V Y ++S G E ++FEE V +
Sbjct: 336 LEDALVLKRKMVDKGIKPDVYT--YTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTF 393
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
N ++ Y G F++ F I P+ +W TL
Sbjct: 394 NALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTL 431
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 152/372 (40%), Gaps = 42/372 (11%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
+I +NAI M P +++ D + G + ++ R Y+ AL+++
Sbjct: 214 LITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLF 273
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-PDTLKDRRV-YGALLNAYV 187
+ + G FR A LD+ K A + + ++ + V Y +L++AYV
Sbjct: 274 EEIKVAG--FRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYV 331
Query: 188 RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY 247
R + +A +L KM D KGI+ DVY
Sbjct: 332 RGGLLEDALVLKRKMVD-----------------------------------KGIKPDVY 356
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
+Y LS + G E VFE M+ PN TF+ + MY G+ E+ + +
Sbjct: 357 TYTTLLSGFVNAGKEELAMEVFEEMR-KVGCKPNICTFNALIKMYGDRGKFEEMVKVFKE 415
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFPGVTNLGYHAMISSLARIG 366
++ D V ++ LL+++G G EV V+ + RS F + ++ +IS+ R G
Sbjct: 416 IKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERD-TFNTLISAYGRCG 474
Query: 367 DIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWE 426
+ ++ L S D N +++ + G ++++E + + G KPN ++
Sbjct: 475 SFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYS 534
Query: 427 TLAEGHIRERRI 438
+L + R +
Sbjct: 535 SLLHAYANGREV 546
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 118/274 (43%), Gaps = 15/274 (5%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + LL + + M + ++M+ +A +N +++ Y + +D+ +
Sbjct: 424 DIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAY 483
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M E G+ D+ +YN L++ G E+ E V MK D PN T+S++ Y
Sbjct: 484 KRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMK-DGGCKPNEVTYSSLLHAYAN 542
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTN 352
+VE+ + S V L+ + V E R + +R + P VT
Sbjct: 543 GREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTT 602
Query: 353 LGYHAMISSLARIGDI----EGMEKIFEEWLSVK-SSYDPRIANLMMSWYVKEGNFDKAE 407
+AM+S R + E + ++E L++ +SY N +M Y + NF K+E
Sbjct: 603 --SNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSY-----NSLMYMYSRTENFHKSE 655
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F I+++G +P+ S+ + + R + EA
Sbjct: 656 QIFREILDKGIEPDVISYNIVIYAYCRNDMMDEA 689
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D A+L+ Y R +M A +++ M + G + YN +M +Y + + + + E +
Sbjct: 599 DVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIF 658
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
E+ +KGI DV SYNI + + ++ + + E MKV V P+ T++T Y
Sbjct: 659 REILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPV-PDVVTYNTFIAAY 715
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+ Y R +E + ++ DKG + YN+++ Y + DE + ++ EMK
Sbjct: 638 YNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMK 697
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
DV +YN ++++ + + V M + + PN T++++ Y K+
Sbjct: 698 VPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYM-IKQGCKPNHNTYNSIVDWYCKL 753
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 152/342 (44%), Gaps = 15/342 (4%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAK--VHGVASAEDFFLSL 169
V+K L +R A E+++ + G + A A I L A G+ + ED +S
Sbjct: 369 VIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFED--MSG 426
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ R Y +++ +A+M +A + ++M KG ++ Y ++ + K + DE
Sbjct: 427 SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDE 486
Query: 230 VESMVSEMKEKGIRLDVYSY-NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
++ M KG +Y +I C E E + ++ ++ P F+++
Sbjct: 487 ARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR--ERGCEPGLFIFTSL 544
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSV 346
+ Y+ G+ E+A + L + +R D + Y L+ L S G+ E V++ + +
Sbjct: 545 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 604
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFD 404
P L Y +I + ++IG++E +I E L KS P N +M YVK D
Sbjct: 605 APDA--LTYGTIIQNFSKIGNVEAAGEILE--LMAKSGVGPDCFAYNSLMDGYVKLERVD 660
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+A ++ ++ G KPN+ ++ L G ++ + A S K
Sbjct: 661 QAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 702
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 127/332 (38%), Gaps = 59/332 (17%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQ---LDLIAKVHGVASAEDFFLSL------PD 171
R + A +V M RG A D + +DL+ V A F S+ PD
Sbjct: 553 RAEEAYQVLTEMTARG-----CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPD 607
Query: 172 TLKDRRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
L YG ++ + + GN E +++ M G YN +M Y+K++ D
Sbjct: 608 AL----TYGTIIQNFSKI---GNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVD 660
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ + M GI+ + ++N+ + G T++ +F+ M V P +++ +
Sbjct: 661 QAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTIL 720
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
K G+V +A + + + R + P
Sbjct: 721 IDGLGKAGRVSEAFSQFQEM---------------------------------IDRGIIP 747
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
Y ++I SLA+ G I +K+ E+ + + + D + + +++ + D A
Sbjct: 748 ECHT--YTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 805
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
F +++ G PN +++ L G R L+
Sbjct: 806 VFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 837
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 111/266 (41%), Gaps = 6/266 (2%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
+LN +AR A L +M G + YN +++ I + DE + M + G
Sbjct: 26 VLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNG 85
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
DV ++ + G + G L + K P+ ++++ Y K G ++
Sbjct: 86 CEPDVIAFTTLIHGFCKAGQPQV--GHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTG 143
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
+ L + + D Y L+ +G+ +E Y ++ R + + +I +
Sbjct: 144 FKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEA 203
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDP--RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
L+ G ++ +++ E ++ Y+P + + ++ K G D+A + +++ +
Sbjct: 204 LSNHGKLDEACELYREM--IERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVA 261
Query: 420 PNSTSWETLAEGHIRERRILEALSCL 445
+ ++ +L +G+ + R+ + L L
Sbjct: 262 TSRVAYNSLMDGYCKLGRVDDGLKLL 287
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 109/265 (41%), Gaps = 9/265 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V +L+ A +A A + + K A + YN +M Y K+ D+ ++ +M
Sbjct: 231 VQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQM 290
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E D+ +YNI ++ + +F+L+ PN T++T+ +
Sbjct: 291 VECDNFPDIQTYNILVAGFSRANRLDDALELFKLLS-SYGCKPNAATYTTIIQGLYDAQR 349
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+E+A+ D + Y ++ + +E ++ ++ + Y A
Sbjct: 350 MEEAKAFFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTA 403
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I L + G IE K FE+ +S S R +++ K A F ++++
Sbjct: 404 VIDGLLKAGRIEDGLKNFED-MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQK 462
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
G P++ ++ TL +G + ++ EA
Sbjct: 463 GCVPDTITYTTLIDGFSKASKMDEA 487
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 116/295 (39%), Gaps = 15/295 (5%)
Query: 156 VHGVASAEDF---FLSLPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+HG A D F L + L D Y L++ + A L ++MR G
Sbjct: 131 IHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGC 190
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ + ++ + DE + EM E+G + + + + G ++
Sbjct: 191 LGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANE 250
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+++ + V K V + ++++ Y K+G+V+ + L ++ D Y+ L++ +
Sbjct: 251 IYQTV-VAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGF 309
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
+ ++ ++ L S Y +I L +E + F+E L V SY
Sbjct: 310 SRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDV-ISYTT 368
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
I L S + D+A F + G PN ++ + +G ++ RI + L
Sbjct: 369 VIKGLADSKRI-----DEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGL 418
>gi|363543445|ref|NP_001241732.1| salt-inducible protein [Zea mays]
gi|195610062|gb|ACG26861.1| salt-inducible protein [Zea mays]
Length = 716
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 140/328 (42%), Gaps = 32/328 (9%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIA---------KVHGVASA 162
+K LR R++ HA ER L DA + LD I + A A
Sbjct: 193 ALKSLRAARQWPHA-----------ERLALDMLDAGVPLDNITYSTLITAARRCRQFAKA 241
Query: 163 EDFF---LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
++F + L D Y A+L+ Y + M+ L D+ R G+ + + V+
Sbjct: 242 VEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAK 301
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
++ + +YD ++ + EM+E GI+ +++ YN L + G G +FE M +D+ V
Sbjct: 302 MFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEM-IDQGVE 360
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
PN T + +A +Y + A + ++ D + + LLS+ VG E ++
Sbjct: 361 PNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCNTLLSMCADVGLVAEAEQL 420
Query: 340 WNLYRSV----FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LM 393
+N + P Y AMI+ GD + ++F E L K +P I + ++
Sbjct: 421 FNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEML--KGGIEPNIMSYTIV 478
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
+ K +A S +E+G KP+
Sbjct: 479 IQCLGKAHRIQQAVEVLESGLEKGLKPD 506
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
LD +N+ L S + E + L +D V + T+ST+ T + Q KA E
Sbjct: 185 LDTIFFNVALKSLRAARQWPHAERL-ALDMLDAGVPLDNITYSTLITAARRCRQFAKAVE 243
Query: 304 SLRRV-ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
R+ + D V Y +L +Y +G KEEV +++ R ++ + +
Sbjct: 244 WFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMF 303
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
GD +G++ +F+E V + + N ++ K G A F +I++G +PN+
Sbjct: 304 GEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNA 363
Query: 423 TSWETLAEGHIRER 436
+ LA+ + R R
Sbjct: 364 RTLTALAKIYGRAR 377
>gi|219884651|gb|ACL52700.1| unknown [Zea mays]
Length = 716
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 140/328 (42%), Gaps = 32/328 (9%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIA---------KVHGVASA 162
+K LR R++ HA ER L DA + LD I + A A
Sbjct: 193 ALKSLRAARQWPHA-----------ERLALDMLDAGVPLDNITYSTLITAARRCRQFAKA 241
Query: 163 EDFF---LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
++F + L D Y A+L+ Y + M+ L D+ R G+ + + V+
Sbjct: 242 VEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAK 301
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
++ + +YD ++ + EM+E GI+ +++ YN L + G G +FE M +D+ V
Sbjct: 302 MFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEM-IDQGVE 360
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
PN T + +A +Y + A + ++ D + + LLS+ VG E ++
Sbjct: 361 PNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCNTLLSMCADVGLVAEAEQL 420
Query: 340 WNLYRSV----FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LM 393
+N + P Y AMI+ GD + ++F E L K +P I + ++
Sbjct: 421 FNEMKGPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEML--KGGIEPNIMSYTIV 478
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
+ K +A S +E+G KP+
Sbjct: 479 IQCLGKARRIQQAVEVLESGLEKGLKPD 506
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
LD +N+ L S + E + L +D V + T+ST+ T + Q KA E
Sbjct: 185 LDTIFFNVALKSLRAARQWPHAERL-ALDMLDAGVPLDNITYSTLITAARRCRQFAKAVE 243
Query: 304 SLRRV-ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
R+ + D V Y +L +Y +G KEEV +++ R ++ + +
Sbjct: 244 WFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMF 303
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
GD +G++ +F+E V + + N ++ K G A F +I++G +PN+
Sbjct: 304 GEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNA 363
Query: 423 TSWETLAEGHIRER 436
+ LA+ + R R
Sbjct: 364 RTLTALAKIYGRAR 377
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 13/362 (3%)
Query: 88 LGSA-SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
LG A ++L ++ G + T+ +V + K A +V + M G L +
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318
Query: 147 -AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A+ L KV +D L L D Y L++A + R +A L+++MRDK
Sbjct: 319 LAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G + +N+++ K + +E + ++ E+G+ DV +YN + + G+ K
Sbjct: 379 GVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAK- 437
Query: 266 EGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
F LM V K + + T +T+ KM + E AEE L R D V Y +
Sbjct: 438 --AFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTV 495
Query: 324 LSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDI-EGMEKIFEEWLS 380
++ Y E R+W+ + R + P ++ Y+ +I L R+ + E ++K+ E++
Sbjct: 496 MAAYFKEYNPEPALRLWDQMIERKLIPSIST--YNTLIKGLCRMERLKEAIDKL-NEFVE 552
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
D N+++ Y KEG+ + A F N ++E KP+ + TL G ++ +
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK 612
Query: 441 AL 442
AL
Sbjct: 613 AL 614
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 120/256 (46%), Gaps = 5/256 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++AY +A A L+D+M KG + + N ++ K+K Y++ E ++
Sbjct: 418 DVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELL 477
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++G D SY +++ + + E +++ M +++ + P+ +T++T+ +
Sbjct: 478 HSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM-IERKLIPSISTYNTLIKGLCR 536
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
M ++++A + L + D Y+ ++ Y G E +R N + S P V
Sbjct: 537 MERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVT 596
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ +++ L G ++ K+FE W+ D N ++ K G+ D A FF+
Sbjct: 597 C--NTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDD 654
Query: 413 IIEEGGKPNSTSWETL 428
+ +G +P++ ++ +
Sbjct: 655 MEVKGLQPDAFTYNVV 670
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 37/304 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK---IKEYDE-V 230
D Y LLNA+ R M G A L+ +M+ G A YN +++ + + IK+ + V
Sbjct: 242 DAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV 301
Query: 231 ESMVS-------------------------------EMKEKGIRL-DVYSYNIWLSSCGS 258
ESM + EM+ G L DV +YN + +C
Sbjct: 302 ESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFK 361
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
+ + E M+ DK V P T + + K G++E+A L ++ D +
Sbjct: 362 WRCSSDALRLLEEMR-DKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
Y+ L+ Y G + + + + + + ++ +L ++ E E++
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
D +M+ Y KE N + A ++ +IE P+ +++ TL +G R R+
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540
Query: 439 LEAL 442
EA+
Sbjct: 541 KEAI 544
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 131/303 (43%), Gaps = 16/303 (5%)
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL--KDRRVYGALLNAYVRARMR 192
RG R L A++A + + ++ D F SL + + + L++ +
Sbjct: 165 RGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
+A + M+ G + ++ YN ++ + + E ++++ MK GI +YN
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA---EESLRRVE 309
+S+ G ++ V E M P+ T++ +A + G+V++A ++ + R+
Sbjct: 285 VSAFARLGWIKQATKVVESMTA-YGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLG 343
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
+ + D V Y+ L+ + R+ R T + ++ ++ SL + G +E
Sbjct: 344 TALP--DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLE 401
Query: 370 ----GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
+EKI EE L+ D N ++ Y K GN KA + ++ +G K ++ +
Sbjct: 402 EALGKLEKIAEEGLAP----DVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTL 457
Query: 426 ETL 428
T+
Sbjct: 458 NTV 460
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D Y +++AY + NA +KM + + + N +M + D+
Sbjct: 556 VPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALK 615
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EKG ++DV +YN + S G + F+ M+V K + P+ T++ + +
Sbjct: 616 LFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEV-KGLQPDAFTYNVVLSAL 674
Query: 293 IKMGQVEKAEESLRRV 308
+ G+ E+A L ++
Sbjct: 675 SEAGRSEEAHNMLHKL 690
>gi|212274745|ref|NP_001130291.1| uncharacterized protein LOC100191385 [Zea mays]
gi|194688762|gb|ACF78465.1| unknown [Zea mays]
gi|223949231|gb|ACN28699.1| unknown [Zea mays]
gi|414874010|tpg|DAA52567.1| TPA: salt-inducible protein [Zea mays]
Length = 716
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 140/328 (42%), Gaps = 32/328 (9%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIA---------KVHGVASA 162
+K LR R++ HA ER L DA + LD I + A A
Sbjct: 193 ALKSLRAARQWPHA-----------ERLALDMLDAGVPLDNITYSTLITAARRCRQFAKA 241
Query: 163 EDFF---LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
++F + L D Y A+L+ Y + M+ L D+ R G+ + + V+
Sbjct: 242 VEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAK 301
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
++ + +YD ++ + EM+E GI+ +++ YN L + G G +FE M +D+ V
Sbjct: 302 MFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEM-IDQGVE 360
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
PN T + +A +Y + A + ++ D + + LLS+ VG E ++
Sbjct: 361 PNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCNTLLSMCADVGLVAEAEQL 420
Query: 340 WNLYRSV----FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LM 393
+N + P Y AMI+ GD + ++F E L K +P I + ++
Sbjct: 421 FNEMKDPECRDVPKPDKWSYTAMINIYGSNGDTDSALQLFAEML--KGGIEPNIMSYTIV 478
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
+ K +A S +E+G KP+
Sbjct: 479 IQCLGKARRIQQAVEVLESGLEKGLKPD 506
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
LD +N+ L S + E + L +D V + T+ST+ T + Q KA E
Sbjct: 185 LDTIFFNVALKSLRAARQWPHAERL-ALDMLDAGVPLDNITYSTLITAARRCRQFAKAVE 243
Query: 304 SLRRV-ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
R+ + D V Y +L +Y +G KEEV +++ R ++ + +
Sbjct: 244 WFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMF 303
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
GD +G++ +F+E V + + N ++ K G A F +I++G +PN+
Sbjct: 304 GEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMIDQGVEPNA 363
Query: 423 TSWETLAEGHIRER 436
+ LA+ + R R
Sbjct: 364 RTLTALAKIYGRAR 377
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 7/267 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ALL A RARM A + D+M G A + YN M+ + +K + + E++V
Sbjct: 142 DAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIV 201
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK-AVNPNWTTFSTMATMYI 293
+ M G+ LD +SYN ++ +G E + ++DK + P+ T+++
Sbjct: 202 TRMDAAGVTLDRFSYNTVIALYCRKGM--GYEAMCARDRMDKEGIRPDTVTWNSSIHGLC 259
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVT 351
K G+V++A + + + D V Y L+ Y G EE ++ + + PGV
Sbjct: 260 KEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVA 319
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y+A++ L G+++ + ++ E K D N +++ Y K G+ A
Sbjct: 320 T--YNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKK 377
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRI 438
++E G + N +++ L G + R +
Sbjct: 378 KMMESGLQLNHFTYKALIHGFCKAREL 404
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 5/267 (1%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y ++++ Y + A + KM G + YN +M K E M
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M ++G++ ++ +Y L ++G+ +M G+ +LM V ++PN FS + Y K G
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM-VRNGIHPNHYVFSILICAYAKQG 388
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
+V++A ++ + D V Y ++ + G+ E+ R + + + PG N+
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG--NIV 446
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+++I SL + +++ E L D N ++ + KEG ++E F+ ++
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
G KP+ ++ TL +G+ ++ EA
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEA 533
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PDT+ YG ++ ++ +A ++M D+ + ++ YN ++ ++D+
Sbjct: 407 PDTV----TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ ++ EM ++GI LD +N + S +G + E +F+LM V V P+ T+ST+
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM-VRIGVKPDIITYSTLI 521
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE---VYR-------- 338
Y G++++A + L + S D V Y+ L++ Y + + E+ ++R
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581
Query: 339 ----VWNLY-------------RSVFPGVTNLG-------YHAMISSLARIGDIEGMEKI 374
+N+ + ++ G+T G Y+ ++ L + + ++
Sbjct: 582 PDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRM 641
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F+ + R N+M+ +K G D+A+ F ++ G P+ ++ +AE I
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Query: 435 E 435
+
Sbjct: 702 Q 702
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 105/241 (43%), Gaps = 8/241 (3%)
Query: 205 KGYAVHSLPYNVMMT-LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGST 262
KG+ V ++ + ++ L + D ++ ++ M + G +V+SYNI L C S
Sbjct: 120 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQ 179
Query: 263 EKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
E +E + ++M D P+ +++T+ + K G ++KA + + R + V Y
Sbjct: 180 EALE-LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
+++ ++ V + V P Y++++ G + ++
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT--YNSIVHGYCSSGQPKEAIGFLKKMH 296
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
S D N +M + K G +A F+S+ + G KP T++ TL +G+ + ++
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356
Query: 440 E 440
E
Sbjct: 357 E 357
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 161/362 (44%), Gaps = 13/362 (3%)
Query: 88 LGSA-SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
LG A ++L ++ G + T+ +V + K A +V + M G L +
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318
Query: 147 -AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A+ L KV +D L L D Y L++A + R +A L+++MRDK
Sbjct: 319 LAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G + +N+++ K + +E + ++ E+G+ DV +YN + + G+ K
Sbjct: 379 GVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAK- 437
Query: 266 EGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
F LM V K + + T +T+ KM + E AEE L R D V Y +
Sbjct: 438 --AFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTV 495
Query: 324 LSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDI-EGMEKIFEEWLS 380
++ Y E R+W+ + R + P ++ Y+ +I L R+ + E ++K+ E +
Sbjct: 496 MAAYFKEYNPEPALRLWDQMIERKLIPSIST--YNTLIKGLCRMERLKEAIDKL-NELVE 552
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
D N+++ Y KEG+ + A F N ++E KP+ + TL G ++ +
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK 612
Query: 441 AL 442
AL
Sbjct: 613 AL 614
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 121/256 (47%), Gaps = 5/256 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++AY +A A L+D+M KG + + N ++ K+K Y++ E ++
Sbjct: 418 DVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELL 477
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++G D SY +++ + + E +++ M +++ + P+ +T++T+ +
Sbjct: 478 HSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM-IERKLIPSISTYNTLIKGLCR 536
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
M ++++A + L + + D Y+ ++ Y G E +R N + S P V
Sbjct: 537 MERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVT 596
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ +++ L G ++ K+FE W+ D N ++ K G+ D A FF+
Sbjct: 597 C--NTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDD 654
Query: 413 IIEEGGKPNSTSWETL 428
+ +G +P++ ++ +
Sbjct: 655 MEVKGLQPDAFTYNVV 670
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 121/304 (39%), Gaps = 37/304 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK---IKEYDE-V 230
D Y LLNA+ R M G A L+ +M+ G A YN +++ + + IK+ + V
Sbjct: 242 DAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV 301
Query: 231 ESMVSEMKEKGIRL--------------------------------DVYSYNIWLSSCGS 258
ESM + E +R DV +YN + +C
Sbjct: 302 ESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFK 361
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
+ + E M+ DK V P T + + K G++E+A L ++ D +
Sbjct: 362 WRCSSDALRLLEEMR-DKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
Y+ L+ Y G + + + + + + ++ +L ++ E E++
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
D +M+ Y KE N + A ++ +IE P+ +++ TL +G R R+
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540
Query: 439 LEAL 442
EA+
Sbjct: 541 KEAI 544
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 131/303 (43%), Gaps = 16/303 (5%)
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL--KDRRVYGALLNAYVRARMR 192
RG R L A++A + + ++ D F SL + + + L++ +
Sbjct: 165 RGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
+A + M+ G + ++ YN ++ + + E ++++ MK GI +YN
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA---EESLRRVE 309
+S+ G ++ V E M P+ T++ +A + G+V++A ++ + R+
Sbjct: 285 VSAFARLGWIKQATKVVESMTA-YGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLS 343
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
+ + D V Y+ L+ + R+ R T + ++ ++ SL + G +E
Sbjct: 344 TALP--DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLE 401
Query: 370 ----GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
+EKI EE L+ D N ++ Y K GN KA + ++ +G K ++ +
Sbjct: 402 EALGKLEKIAEEGLAP----DVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTL 457
Query: 426 ETL 428
T+
Sbjct: 458 NTV 460
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D Y +++AY + NA +KM + + + N +M + D+
Sbjct: 556 VPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALK 615
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EKG ++DV +YN + S G + F+ M+V K + P+ T++ + +
Sbjct: 616 LFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEV-KGLQPDAFTYNVVLSAL 674
Query: 293 IKMGQVEKAEESLRRV 308
+ G+ E+A L ++
Sbjct: 675 SEAGRSEEAHNMLHKL 690
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 5/267 (1%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y ++++ Y + A + KM G + YN +M K E M
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M ++G++ ++ +Y L ++G+ +M G+ +LM V ++PN FS + Y K G
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM-VRNGIHPNHYVFSILICAYAKQG 388
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
+V++A ++ + D V Y ++ + G+ E+ R + + + PG N+
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG--NIV 446
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+++I SL + +++ E L D N ++ + KEG ++E F+ ++
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
G KP+ ++ TL +G+ ++ EA
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEA 533
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PDT+ YG ++ ++ +A ++M D+ + ++ YN ++ ++D+
Sbjct: 407 PDTV----TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ ++ EM ++GI LD +N + S +G + E +F+LM V V P+ T+ST+
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM-VRIGVKPDIITYSTLI 521
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE---VYR-------- 338
Y G++++A + L + S D V Y+ L++ Y + + E+ ++R
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581
Query: 339 ----VWNLY-------------RSVFPGVTNLG-------YHAMISSLARIGDIEGMEKI 374
+N+ + ++ G+T G Y+ ++ L + + ++
Sbjct: 582 PDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRM 641
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F+ + R N+M+ +K G D+A+ F ++ G P+ ++ +AE I
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Query: 435 E 435
+
Sbjct: 702 Q 702
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 105/241 (43%), Gaps = 8/241 (3%)
Query: 205 KGYAVHSLPYNVMMT-LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGST 262
KG+ V ++ + ++ L + D ++ ++ M + G +V+SYNI L C S
Sbjct: 120 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQ 179
Query: 263 EKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
E +E + ++M D P+ +++T+ + K G ++KA + + R + V Y
Sbjct: 180 EALE-LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
+++ ++ V + V P Y++++ G + ++
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT--YNSIVHGYCSSGQPKEAIGFLKKMH 296
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
S D N +M + K G +A F+S+ + G KP T++ TL +G+ + ++
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356
Query: 440 E 440
E
Sbjct: 357 E 357
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 132/271 (48%), Gaps = 13/271 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y L+ +++ G+A ++ +MR++G A + YN ++ K K+ DE S + EM
Sbjct: 457 IYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEM 516
Query: 238 KEKGIRLDVYSYNIWLSS---CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E G + D ++Y ++S G S +K V E+++ V PN + + Y K
Sbjct: 517 VENGFKPDAFTYGAFISGYIEAGEFASADKY--VKEMLEC--GVIPNKVLCTGLINEYCK 572
Query: 295 MGQVEKAEESLRR-VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVT 351
G+V +A + R VE I G D Y L++ GK + +++ R + P V
Sbjct: 573 KGKVIEACSAFRSMVEQGILG-DAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDV- 630
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y +I +++G+++ IF+E + + + I N+++ + + G +KA+ +
Sbjct: 631 -FSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLD 689
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ +G PN+ ++ T+ +G+ + + EA
Sbjct: 690 EMSGKGFPPNAVTYCTIIDGYCKSGDLAEAF 720
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 122/287 (42%), Gaps = 14/287 (4%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D + Y L+N V+ +AE + +MR KG A Y ++ + K+ + S
Sbjct: 592 LGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASS 651
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM + G+ +V YN+ L G EK + + + M K PN T+ T+ Y
Sbjct: 652 IFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMS-GKGFPPNAVTYCTIIDGY 710
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV-- 350
K G + +A + ++ + D Y +L + +V R ++ + G
Sbjct: 711 CKSGDLAEAFQLFDEMKLKGLVPDSFVYT---TLVDGCCRLNDVERAITIFETNEKGCAS 767
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD----PR--IANLMMSWYVKEGNFD 404
++ ++A+I+ + + G E + + S+D P N+M+ + KEGN +
Sbjct: 768 SSAPFNALINWVFKFGKTELTTDMINRLMD--GSFDKFGKPNDVTYNIMIDYLCKEGNLE 825
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
A+ F+ + + P ++ +L G+ + R E S AA
Sbjct: 826 AAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAA 872
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 147/371 (39%), Gaps = 57/371 (15%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI---AKVHGVASAEDFFLS 168
++K + R+ A+ V M +G A D LI +K + A F L
Sbjct: 461 LIKTFLQKSRFGDAVRVLKEMREQG-----IAPDTFCYNSLIIGLSKAKKMDEARSFLLE 515
Query: 169 LPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY------------------- 207
+ + D YGA ++ Y+ A +A+ + +M + G
Sbjct: 516 MVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGK 575
Query: 208 ------AVHSL----------PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
A S+ Y V+M +K + ++ E + EM+ KGI DV+SY
Sbjct: 576 VIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGT 635
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ G+ +K +F+ M V + N ++ + + + G++EKA+E L + +
Sbjct: 636 LIDGFSKLGNMQKASSIFDEM-VQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIE 369
+ V Y ++ Y G E +++++ + + P + Y ++ R+ D+E
Sbjct: 695 GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVP--DSFVYTTLVDGCCRLNDVE 752
Query: 370 GMEKIFE-EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG----GKPNSTS 424
IFE SS P N +++W K G + N +++ GKPN +
Sbjct: 753 RAITIFETNEKGCASSSAP--FNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVT 810
Query: 425 WETLAEGHIRE 435
+ + + +E
Sbjct: 811 YNIMIDYLCKE 821
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 116/266 (43%), Gaps = 11/266 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y LL + R+ A+ L+D+M KG+ +++ Y ++ Y K + E + EM
Sbjct: 667 IYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEM 726
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K KG+ D + Y + C E+ +FE +K + F+ + K G+
Sbjct: 727 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFE--TNEKGCASSSAPFNALINWVFKFGK 784
Query: 298 VEKAEESLRRVES----RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
E + + R+ + + V Y+ ++ G E +++ + T +
Sbjct: 785 TELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVI 844
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA-----EA 408
Y ++++ ++G M +F+E ++ D + +++++ ++KEG KA +
Sbjct: 845 TYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQM 904
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIR 434
F + +++G K + ++ L G +
Sbjct: 905 FAKNAVDDGCKLSISTCRALLSGFAK 930
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/317 (18%), Positives = 124/317 (39%), Gaps = 40/317 (12%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+S + R+ Y L++ + + +A+ L+ +M G ++ Y++++ +K +
Sbjct: 271 MSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRN 330
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
D +V EM G +D Y+ ++ +G+ EK + +F+ M + V P ++
Sbjct: 331 ADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGM-ITFGVTPGARAYA 389
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG--SVGKKEEVYRVWN--- 341
++ + + V K E L ++ R PY Y ++ G S G + Y +
Sbjct: 390 SLIEGFFREKNVRKGYELLVEIKKRNIVIS--PYTYGTAVKGMCSSGDLDGAYNIVKEMG 447
Query: 342 ------------------LYRSVF------------PGVT--NLGYHAMISSLARIGDIE 369
L +S F G+ Y+++I L++ ++
Sbjct: 448 ASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMD 507
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
E + D +S Y++ G F A+ + ++E G PN L
Sbjct: 508 EARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLI 567
Query: 430 EGHIRERRILEALSCLK 446
+ ++ +++EA S +
Sbjct: 568 NEYCKKGKVIEACSAFR 584
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 112/268 (41%), Gaps = 19/268 (7%)
Query: 175 DRRV--YGALLNAYVRARMRGNAELLIDKMRDKGY-AVHSLP-YNVMMTLYMKIKEYDEV 230
D RV +G L++ Y+ A + +D V SL N ++ +K D
Sbjct: 149 DDRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLF 208
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ M E+ + DV SY + + + G+ + + V L+K ++ + AT
Sbjct: 209 WDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDV--LLKTEEELGT--------AT 258
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
+ V++A E + + + R Y+ L+ + E+ + SV
Sbjct: 259 L-----NVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFA 313
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
N+ Y +I L + + + + E +S S DP + + + KEG +KA+A F
Sbjct: 314 DNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALF 373
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRI 438
+ +I G P + ++ +L EG RE+ +
Sbjct: 374 DGMITFGVTPGARAYASLIEGFFREKNV 401
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 119/253 (47%), Gaps = 4/253 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG L+N V+ R +A L+ M ++GY ++ Y+V+++ K + +E S+ +M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG + ++ Y++ + +G + + + M + PN T+S++ + K G
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM-IASGCLPNAYTYSSLMKGFFKTGLC 448
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
E+A + + ++ R++ Y L+ VG+ +E VW+ ++ + Y ++
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 359 ISSLARIGDIEGMEKIFEEWLS---VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
I L IG ++ K++ E L KS D N+++ + + +A NS+++
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Query: 416 EGGKPNSTSWETL 428
G P+ + T
Sbjct: 569 RGCDPDVITCNTF 581
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 135/327 (41%), Gaps = 9/327 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDL--IAKVHGVASAEDFFLSLPD--TLKDRR 177
Y LE YD++ N +S + + L + + K+ V A + F +P+ L D
Sbjct: 164 YHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY 223
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++ + A LL+D+M+ +G + + YNV++ K + V +V M
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG + +YN + +G +K + E M K + PN T+ T+ +K +
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI-PNDVTYGTLINGLVKQRR 342
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGY 355
A L +E R ++ Y L+S GK EE +W + P + + Y
Sbjct: 343 ATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNI--VVY 400
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
++ L R G ++I ++ + + +M + K G ++A + + +
Sbjct: 401 SVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
G N + L +G R+ EA+
Sbjct: 461 TGCSRNKFCYSVLIDGLCGVGRVKEAM 487
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 5/267 (1%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y ++++ Y + A + KM G + YN +M K E M
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M ++G++ ++ +Y L ++G+ +M G+ +LM V ++PN FS + Y K G
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM-VRNGIHPNHYVFSILICAYAKQG 388
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
+V++A ++ + D V Y ++ + G+ E+ R + + + PG N+
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG--NIV 446
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+++I SL + +++ E L D N ++ + KEG ++E F+ ++
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
G KP+ ++ TL +G+ ++ EA
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEA 533
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PDT+ YG ++ ++ +A ++M D+ + ++ YN ++ ++D+
Sbjct: 407 PDTV----TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ ++ EM ++GI LD +N + S +G + E +F+LM V V P+ T+ST+
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM-VRIGVKPDIITYSTLI 521
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE---VYR-------- 338
Y G++++A + L + S D V Y+ L++ Y + + E+ ++R
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581
Query: 339 ----VWNLY-------------RSVFPGVTNLG-------YHAMISSLARIGDIEGMEKI 374
+N+ + ++ G+T G Y+ ++ L + + ++
Sbjct: 582 PDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRM 641
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F+ + R N+M+ +K G D+A+ F ++ G P+ ++ +AE I
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Query: 435 E 435
+
Sbjct: 702 Q 702
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 105/241 (43%), Gaps = 8/241 (3%)
Query: 205 KGYAVHSLPYNVMMT-LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGST 262
KG+ V ++ + M+ L + D ++ ++ M + G +V+SYNI L C S
Sbjct: 120 KGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQ 179
Query: 263 EKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
E +E + ++M D P+ +++T+ + K G ++KA + + R + V Y
Sbjct: 180 EALE-LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
+++ ++ V + V P Y++++ G + ++
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT--YNSIVHGYCSSGQPKEAIGFLKKMH 296
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
S D N +M + K G +A F+S+ + G KP T++ TL +G+ + ++
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356
Query: 440 E 440
E
Sbjct: 357 E 357
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 103/253 (40%), Gaps = 11/253 (4%)
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL--DVYSYNIWL 253
++++ +M G + YN+++ E ++ M + G DV SY +
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+ +G +K G + M +D+ + PN T+S++ K ++KA E L +
Sbjct: 207 NGFFKEGDLDKAYGTYHEM-LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGM 371
+ Y+ ++ Y S G+ +E S V P V Y++++ L + G
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT--YNSLMDYLCKNGRCTEA 323
Query: 372 EKIFEEWLSVKSSYDPRIAN--LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
K+F+ K P I ++ Y +G + + ++ G PN + L
Sbjct: 324 RKMFDSM--TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 430 EGHIRERRILEAL 442
+ ++ ++ +A+
Sbjct: 382 CAYAKQGKVDQAM 394
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 5/267 (1%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y ++++ Y + A + KM G + YN +M K E M
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M ++G++ ++ +Y L ++G+ +M G+ +LM V ++PN FS + Y K G
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM-VRNGIHPNHYVFSILICAYAKQG 388
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
+V++A ++ + D V Y ++ + G+ E+ R + + + PG N+
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG--NIV 446
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+++I SL + +++ E L D N ++ + KEG ++E F+ ++
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
G KP+ ++ TL +G+ ++ EA
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEA 533
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PDT+ YG ++ ++ +A ++M D+ + ++ YN ++ ++D+
Sbjct: 407 PDTV----TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ ++ EM ++GI LD +N + S +G + E +F+LM V V P+ T+ST+
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM-VRIGVKPDIITYSTLI 521
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE---VYR-------- 338
Y G++++A + L + S D V Y+ L++ Y + + E+ ++R
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581
Query: 339 ----VWNLY-------------RSVFPGVTNLG-------YHAMISSLARIGDIEGMEKI 374
+N+ + ++ G+T G Y+ ++ L + + ++
Sbjct: 582 PDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRM 641
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F+ + R N+M+ +K G D+A+ F ++ G P+ ++ +AE I
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Query: 435 E 435
+
Sbjct: 702 Q 702
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 105/241 (43%), Gaps = 8/241 (3%)
Query: 205 KGYAVHSLPYNVMMT-LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGST 262
KG+ V ++ + ++ L + D ++ ++ M + G +V+SYNI L C S
Sbjct: 120 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQ 179
Query: 263 EKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
E +E + ++M D P+ +++T+ + K G ++KA + + R + V Y
Sbjct: 180 EALE-LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
+++ ++ V + V P Y++++ G + ++
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT--YNSIVHGYCSSGQPKEAIGFLKKMH 296
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
S D N +M + K G +A F+S+ + G KP T++ TL +G+ + ++
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356
Query: 440 E 440
E
Sbjct: 357 E 357
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 147/313 (46%), Gaps = 6/313 (1%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK-DRRVYGALL 183
A++V++ M + G + L +A I V +AE F L + ++ DR + +LL
Sbjct: 239 AIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLL 298
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR 243
R + A L +M +G YN ++ K + D ++SEM K I
Sbjct: 299 AVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIM 358
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
+V +Y+ + G ++ +F MK ++ + +++T+ ++Y K+G+ E+A
Sbjct: 359 PNVVTYSTVIDGYAKAGRLDEALNLFNEMKF-ASIGLDRVSYNTLLSIYAKLGRFEEALN 417
Query: 304 SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISS 361
+ +ES +D V Y+ LL YG GK EEV RV+ ++ +FP + L Y +I
Sbjct: 418 VCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNL--LTYSTLIDV 475
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
++ G + ++F E+ D + + ++ K G + A +F + + +EG +PN
Sbjct: 476 YSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPN 535
Query: 422 STSWETLAEGHIR 434
++ ++ + R
Sbjct: 536 VVTYNSIIDAFGR 548
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 5/194 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ Y +A A L ++M+ + + YN ++++Y K+ ++E ++ EM
Sbjct: 363 TYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEM 422
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ GI+ D +YN L G QG E+++ VFE MK ++ + PN T+ST+ +Y K G
Sbjct: 423 ESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAER-IFPNLLTYSTLIDVYSKGGL 481
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
++A E R + D V Y L+ G E + + P V Y
Sbjct: 482 YQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVT--Y 539
Query: 356 HAMISSLARIGDIE 369
+++I + R G E
Sbjct: 540 NSIIDAFGRSGSAE 553
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 145/322 (45%), Gaps = 4/322 (1%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+++EL + A+ +++ R +R A+ + ++ ++ V A++ F + +
Sbjct: 154 LLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFETALN 213
Query: 172 TLKDRRVYG--ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYD 228
VY AL++AY R+ A + + M+ G + + YN ++ K +++
Sbjct: 214 EGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFN 273
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ EM G++ D ++N L+ CG G E +F M + + + + T++T+
Sbjct: 274 RAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEM-LYRGIEQDIFTYNTL 332
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
K GQ++ A + + + + + V Y ++ Y G+ +E ++N +
Sbjct: 333 LDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASI 392
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
G+ + Y+ ++S A++G E + +E S D N ++ Y K+G +++ +
Sbjct: 393 GLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKR 452
Query: 409 FFNSIIEEGGKPNSTSWETLAE 430
F + E PN ++ TL +
Sbjct: 453 VFEEMKAERIFPNLLTYSTLID 474
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD Y ALL Y + + + ++M+ + + L Y+ ++ +Y K Y E +
Sbjct: 429 KDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEV 488
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
E K+ G++ DV Y+ + + G E + M + + PN T++++ +
Sbjct: 489 FREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEM-TKEGIRPNVVTYNSIIDAFG 547
Query: 294 KMGQVE 299
+ G E
Sbjct: 548 RSGSAE 553
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 150/325 (46%), Gaps = 9/325 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAA--IQLDLIAKVHGVASAEDFFLSLP--DTLKDRR 177
+K AL+++ M +G L ++ + + LD + K A F++ + R
Sbjct: 349 FKEALKMFHMMEAKG----LIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ + A +++++M G + Y+ ++ + ++ + +V +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRI 464
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G+ + Y+ + +C G ++ ++E M + + P+ TF+ + T K G+
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAM-ILEGNTPDHFTFNVLVTSLCKAGK 523
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
V +AEE +R + S + V + L++ YGS G+ + + V++ V T Y +
Sbjct: 524 VAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ L + G + EK + +V ++ D + N +++ K GN DKA + F +++
Sbjct: 584 LLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRS 643
Query: 418 GKPNSTSWETLAEGHIRERRILEAL 442
P+S ++ +L G R+ + + A+
Sbjct: 644 ILPDSFTYTSLISGLCRKGKTVIAI 668
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 154/367 (41%), Gaps = 27/367 (7%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S+ ++ EK G + T V+ K R+K A+E+ D MN +G + + I
Sbjct: 212 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIH 271
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRR---------VYGALLNAYVRARMRGNAELLID 200
DL SA+ + L L+D R Y LLN + A L++
Sbjct: 272 -DL---CRSNRSAKGYLL-----LRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLN 322
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M G + + + +N ++ ++ + E M M+ KG+ SY + L
Sbjct: 323 EMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNA 382
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
+ G + MK + V T++ M K G +++A L + D V Y
Sbjct: 383 EFDLARGFYMRMKRN-GVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTY 441
Query: 321 HYLLSLYGSVGK----KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
L++ + VG+ KE V R++ + S P + Y +I + R+G ++ +I+E
Sbjct: 442 SALINGFCRVGRLKTAKEIVCRIYRVGLS--P--NGIIYSTLIYNCCRMGCLKETIRIYE 497
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ ++ D N++++ K G +AE F + +G PN+ S++ L G+
Sbjct: 498 AMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSG 557
Query: 437 RILEALS 443
L+A S
Sbjct: 558 EGLKAFS 564
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 115/269 (42%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+N + L+ KM GYA + YN ++ Y K + ++
Sbjct: 192 DVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 251
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
M KG+ DV +YN+ + C S S + + ++ K + ++PN T++T+ +
Sbjct: 252 DHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRK--RMIHPNEVTYNTLLNGFS 309
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
G+V A + L + + + V ++ L+ + S G +E +++++ + T +
Sbjct: 310 NEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEV 369
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFNS 412
Y ++ L + + + + + F + RI M+ K G D+A N
Sbjct: 370 SYGVLLDGLCKNAEFD-LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNE 428
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ ++G P+ ++ L G R R+ A
Sbjct: 429 MSKDGIDPDIVTYSALINGFCRVGRLKTA 457
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 126/353 (35%), Gaps = 47/353 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V+ L+ Y+R M ++ + M G+ N ++ +K E V S + EM
Sbjct: 125 VFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEM 184
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ I DV ++NI ++ ++GS +K + + M+ P T++T+ Y K G+
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFKKSSYLMQKME-KSGYAPTIVTYNTVLHWYCKKGR 243
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ A E L + + D Y+ L+ + + Y + R + Y
Sbjct: 244 FKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTY-- 301
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
N +++ + EG A N ++ G
Sbjct: 302 ---------------------------------NTLLNGFSNEGKVLIARQLLNEMLTFG 328
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
PN ++ L +GHI E EAL F AK V+ + ++
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALK----MFHMMEAKGLIGTEVSYGVLLDGLCKNAEF 384
Query: 478 GSKEAFVALLRQPG-------YRKEKDYMSLIGLTDEAVAENNKKNDEDSDED 523
F +++ G Y D + G DEAV N+ + + D D
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPD 437
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 16/175 (9%)
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL-SLYGS 329
LM + N N + F + +Y++ G ++ + E R + + G + P Y ++ GS
Sbjct: 112 LMATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMG--LYGFN--PSVYTCNAILGS 167
Query: 330 VGKKEEVYRVWN-----LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
+ K E VW+ L R + P V ++ +I+ L G + + ++ KS
Sbjct: 168 IVKSCEDVSVWSFLKEMLKRKICPDVAT--FNILINVLCAEGSFKKSSYLMQKM--EKSG 223
Query: 385 YDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
Y P I N ++ WY K+G F A + + +G + ++ L R R
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNR 278
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 71/387 (18%), Positives = 152/387 (39%), Gaps = 32/387 (8%)
Query: 153 IAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ K VA AE+F ++ L + + L+N Y + A + D+M G+
Sbjct: 518 LCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPT 577
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
Y ++ K E + ++ +D N +++ G+ +K +F
Sbjct: 578 FFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFG 637
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M V +++ P+ T++++ + + G+ A + E+R + VP + + +
Sbjct: 638 EM-VQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEAR---GNLVPNKVMYTCFVDG 693
Query: 331 GKKEEVYRVWNLYRSVFP--GVTN--LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
K ++ +R G+T + +AMI +R+G IE + E + +
Sbjct: 694 MFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPN 753
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER------RILE 440
N+++ Y K + + + S+I G P+ + ++ G +IL+
Sbjct: 754 LTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILK 813
Query: 441 ALSC------------LKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
A C L A G +W VNV+ D + +A V++L
Sbjct: 814 AFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGI---SLDKNTCDAIVSVLN 870
Query: 489 QPGYRKEKDYMSLIGLTDEAVAENNKK 515
+ +R ++ M L ++ + ++ ++K
Sbjct: 871 R-NHRFQESRMVLHEMSKQGISPESRK 896
>gi|449523950|ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 191
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 37/200 (18%)
Query: 74 NAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMN 133
++++R++S + +P + +L+ W + + EL ++KELR ++R+KHALEV D+ N
Sbjct: 29 DSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEVEDYFN 88
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
N +P LK +V+ ALLN Y +
Sbjct: 89 N----------------------------------MPSQLKRCQVHIALLNCYAHEKYAD 114
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
A ++ K+++ G+A SLPYN+ M LY +I E++ ++ S +KE + D ++Y L
Sbjct: 115 KANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLD---SPLKETDVDHDQFTYTTRL 171
Query: 254 SSCGSQGSTEKMEGVFELMK 273
S+ + +E + E M+
Sbjct: 172 SAYATAFDFTGIEKIMEQME 191
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 7/270 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ALL A RARM A + D+M G AV + YN M+ + +K + E++V
Sbjct: 148 DAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALV 207
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK-AVNPNWTTFSTMATMYI 293
+ M G+ LD +SYN ++ +G + E + ++DK + + T++++
Sbjct: 208 TRMDAAGVPLDRFSYNTVIALYCKKGM--RYEAMCVRDRMDKEGIRADTVTWNSLIHGLC 265
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVT 351
K G+V++A + + + D V Y L+ Y G EE ++ + + PGV
Sbjct: 266 KYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVA 325
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y+A++ L G ++ + ++ E K D N +++ Y K G+ A
Sbjct: 326 T--YNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKK 383
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++E G + N +++ L G + + + EA
Sbjct: 384 KMMESGLQLNQFTYKALIHGFCKAKELDEA 413
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 126/293 (43%), Gaps = 18/293 (6%)
Query: 117 RKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLK 174
+K RY+ A+ V D M+ G R ++ I + K V A F ++
Sbjct: 231 KKGMRYE-AMCVRDRMDKEGIRADTVTWNSLIHG--LCKYGRVKEAAQLFTEMAAAQATP 287
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP----YNVMMTLYMKIKEYDEV 230
D Y L++ Y RA GN E + K+R + A LP YN ++ + + EV
Sbjct: 288 DNVTYTTLIDGYCRA---GNIEEAV-KLRGEMEATGMLPGVATYNAILRKLCEDGKMKEV 343
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+++EM E+ ++ D + N +++ +G V + M ++ + N T+ +
Sbjct: 344 NQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKM-MESGLQLNQFTYKALIH 402
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFP 348
+ K ++++A+E+ ++ + + +L+ + + V + + + R + P
Sbjct: 403 GFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPP 462
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
Y ++I L R G ++ +K+F++ S D + + Y+ EG
Sbjct: 463 D--KAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEG 513
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 161/377 (42%), Gaps = 47/377 (12%)
Query: 88 LGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA- 146
L + ++D G R+ T E+ VV+ + + ++ AL+ ++W+ R AS A
Sbjct: 138 LPPGAPVDDVLDGARA-TPDEVAFVVRAVGE-SSWRRALDAFEWL----ARSTAPASRAV 191
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
A+ L ++ + + AE+ FL +V+ A++ Y R+ +A L+D M D+G
Sbjct: 192 AVVLGVLGRARQDSIAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRG 251
Query: 207 YAVHSLPYNVMMTLYMK--IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
+ +N ++ K ++ E+++ G+R DV +YN +S+C + E
Sbjct: 252 IDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLED 311
Query: 265 MEGVFELM----------------------------------KVDKAVNPNWTTFSTMAT 290
VFE M V+K P+ T++++
Sbjct: 312 AVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLY 371
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
+ K G V+K E + + ++ + Y+ ++ +YG +G+ + +++ R+V
Sbjct: 372 AFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTP 431
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEA 408
+ Y MI SL ++ I K+ E+ + P + ++ Y K G AE
Sbjct: 432 DAVTYTVMIDSLGKMDKIAEAGKVLEDM--ADAGLKPTLVAFSALICAYAKGGRRADAEK 489
Query: 409 FFNSIIEEGGKPNSTSW 425
F+ +I G KP+ ++
Sbjct: 490 TFDCMIASGVKPDRLAY 506
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 122/322 (37%), Gaps = 51/322 (15%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R +L RAR AE + + +G V +N MM +Y + +D+ ++
Sbjct: 189 RAVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQV--FNAMMGVYARSGRFDDARQLLDT 246
Query: 237 MKEKGIRLDVYSYNIWL---SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
M ++GI D+ S+N + S G + ++ +FE+ + + P+ T++T+ +
Sbjct: 247 MHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQ--SGLRPDVITYNTLIS--- 301
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
Q E+++ E I R +W
Sbjct: 302 ACSQSSNLEDAVTVFEEMIASECRPD-------------------LWT------------ 330
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+AM+S R G E E++F E + D N ++ + KEGN DK E +
Sbjct: 331 -YNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEEL 389
Query: 414 IEEGGKPNSTSWETLAEGHIRERRI---------LEALSCLKGAFAAEGAKSWRPKPVNV 464
++ G K N ++ T+ + + R+ + A+ C A K +
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKI 449
Query: 465 INFFKACEEESDMGSKEAFVAL 486
K E+ +D G K VA
Sbjct: 450 AEAGKVLEDMADAGLKPTLVAF 471
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 101/236 (42%), Gaps = 1/236 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A+++ + R AE L ++ +KG+ ++ YN ++ + K D+VE E+
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEEL 389
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G + + +YN + G G + G+++ M+ P+ T++ M KM +
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRA-VGCTPDAVTYTVMIDSLGKMDK 448
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ +A + L + V + L+ Y G++ + + ++ + L Y
Sbjct: 449 IAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLV 508
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
M+ AR G+ E M +++ ++ D + +++ KE ++ E +
Sbjct: 509 MLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDM 564
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +LL A +A +R A+ L ++MR K Y ++ Y++MM +Y + + E++++ MK
Sbjct: 993 YKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK 1052
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
E GI + + +I ++S G+ G + E V +K ++ + +ST+ Y+K G
Sbjct: 1053 EDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLK-SSSLEVSTLPYSTVFDAYLKNG 1109
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ++ +LLN Y A + + + G YN ++ +Y + +E +++
Sbjct: 919 DLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLL 978
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM ++G+ + SY L++ E+ + +FE M+ K+ N + + M +Y
Sbjct: 979 NEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMR-SKSYQLNRSIYHMMMKIYRN 1037
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G KAE L ++ H L++ YG+ G+ E V N +S V+ L
Sbjct: 1038 AGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLP 1097
Query: 355 YHAMISSLARIGDIE-GMEKIFE 376
Y + + + GD + G++K+ E
Sbjct: 1098 YSTVFDAYLKNGDYDLGIKKLLE 1120
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 117/301 (38%), Gaps = 56/301 (18%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DRR++ AL++AY + + A + D M G N MM + DE+ +V
Sbjct: 779 DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVV 838
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV-------------------- 274
E+++ ++ + + L + G VFE+MK+
Sbjct: 839 GELQDMDFKISKSTVLLMLDAFAKAGD------VFEVMKIYNGMKAAGYLPNMHLYRSMT 892
Query: 275 --------------------DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
P+ + F+++ MY G ++ + + +
Sbjct: 893 SLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLE 952
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGME 372
D Y+ L+ +Y + EE + + N R + P + + Y +++++ A+ E +
Sbjct: 953 PDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQS--YKSLLAASAKAELREQAD 1010
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
++FEE S + I ++MM Y GN KAE + E+G +P T+A H
Sbjct: 1011 QLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEP------TIATMH 1064
Query: 433 I 433
I
Sbjct: 1065 I 1065
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 111/271 (40%), Gaps = 3/271 (1%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT-LYMKIKEYDEVESMV 234
+ +Y ++++ Y + A L+D G ++ L V++ Y IK + + E +V
Sbjct: 710 KNIYESIISTYCKLGFPETAHGLMDDALQSGIPLNILSCRVIIIEAYGNIKLWQQAEILV 769
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+++ +D +N + + G EK VF+ M + P + + M I
Sbjct: 770 KGLRQAS-GIDRRIWNALIHAYAESGLYEKARAVFDNM-IKTGPLPTVDSVNGMMRALIV 827
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G++++ + ++ + +L + G EV +++N ++
Sbjct: 828 DGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHL 887
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +M S L +E + E D I N +++ Y GNFD+ + SI+
Sbjct: 888 YRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSIL 947
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCL 445
E G +P+ ++ TL + R R E + L
Sbjct: 948 EAGLEPDEDTYNTLIVMYCRSLRPEEGFTLL 978
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 4/159 (2%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT-LKDR 176
K R A+ +YD M G A + +D + K+ +A A + D LK
Sbjct: 410 KMGRLDLAVGLYDEMRAVG--CTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPT 467
Query: 177 RV-YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
V + AL+ AY + R +AE D M G L Y VM+ ++ + E +++ +
Sbjct: 468 LVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYR 527
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV 274
M R D Y + L + + E++E + + M++
Sbjct: 528 TMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMEL 566
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 69/166 (41%), Gaps = 1/166 (0%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
K+ Y +++ Y + A L D+MR G ++ Y VM+ K+ + E +
Sbjct: 396 KNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKV 455
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ +M + G++ + +++ + + G E F+ M + V P+ + M ++
Sbjct: 456 LEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCM-IASGVKPDRLAYLVMLDVFA 514
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
+ G+ EK R + + D Y LL K EE+ +
Sbjct: 515 RSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEI 560
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 122/273 (44%), Gaps = 6/273 (2%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y + ++A +AR AEL++ +M G+ + YN M+ Y + ++ E
Sbjct: 258 VVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETA 317
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
M EM +G+ D+++ N ++SS G +++ F+ M K P+ T+S +
Sbjct: 318 GMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAA-KGHKPDLVTYSVLLHG 376
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPG 349
Y G V +E D Y+ L+ YG G +E ++ R V P
Sbjct: 377 YAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPD 436
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
Y +I++ +R+G + F + +++ D + N ++ + GN KA+
Sbjct: 437 AWT--YGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKEL 494
Query: 410 FNSIIEEG-GKPNSTSWETLAEGHIRERRILEA 441
+ ++ G +PN+ + ++ +E R++EA
Sbjct: 495 ISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 152/381 (39%), Gaps = 28/381 (7%)
Query: 85 NPQLGSASVLNDW-EKGG--RSLTKWEL------CR-VVKELRKFRRYKHALEVYDWMNN 134
N + S+L W E G R +T+ L C + L K + K A E +D M
Sbjct: 301 NCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAA 360
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD---------TLKDRRVYGALLNA 185
+G + L + HG A AE + + + + + D VY L++A
Sbjct: 361 KGHKPDLVTYSVLL--------HGYA-AEGYVVDMLNLFNSMEGNGIVADHSVYNILIDA 411
Query: 186 YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD 245
Y + M A L+ +M+++G + Y ++ + ++ + ++M G++ D
Sbjct: 412 YGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPD 471
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
YN + G+ K + + M PN F+++ K G+V +A++
Sbjct: 472 TIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIF 531
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARI 365
V D + ++ L+ YG VGK E+ + V + SV + Y A++ R
Sbjct: 532 DLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRN 591
Query: 366 GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
G I+ +F E LS +++ +G A+ + +IE G + ++
Sbjct: 592 GRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTC 651
Query: 426 ETLAEGHIRERRILEALSCLK 446
+ G R EA++ K
Sbjct: 652 GIILGGLCRNNCDDEAIALFK 672
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 112/272 (41%), Gaps = 12/272 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE-VESMVSEM 237
Y L++ RA L + G + N+++ K D+ V ++ M
Sbjct: 122 YNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRM 181
Query: 238 KEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
E G+ D SY+ L S C S ++ + ++K +PN +++T+ + + G
Sbjct: 182 PELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREG 241
Query: 297 QVEKAEESLRRVESRITGRDRVPYH-YLLSLYGS--VGKKEEVYR--VWNLYRSVFPGVT 351
+V KA + + D V Y Y+ +L + + K E V R + N +
Sbjct: 242 EVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEP-----D 296
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y+ MI + +G + +F E D N MS K G +A FF+
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
S+ +G KP+ ++ L G+ E +++ L+
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLN 388
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 123/280 (43%), Gaps = 20/280 (7%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGN---AELLIDKMRDKGYA-VHSLPYNVMMTLYMKIK 225
PDT+ VY +L+ + M GN A+ LI +M +G +++ +N ++ K
Sbjct: 470 PDTI----VYNSLIQGFC---MHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEG 522
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
E + + + G R DV ++N + G G EK GV + M + + P+ T+
Sbjct: 523 RVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAM-ISVGIEPDVVTY 581
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPY----HYLLSLYGSVGKKEEVYRVWN 341
S + Y + G+++ R + S+ + Y H L + +VG K+ + +
Sbjct: 582 SALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
++ ++ G ++ L R + +F++ ++ ++ I N M+ K
Sbjct: 642 SGTTM--DISTCGI--ILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVR 697
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++A F+SI G PN++++ + ++E + EA
Sbjct: 698 KREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEA 737
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 75/174 (43%), Gaps = 2/174 (1%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
T D G +L R A L K+ + N M+ K+++ +E
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAN 703
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ + G+ + +Y + +++ +GS E+ + +F LM+ P+ + + +
Sbjct: 704 ELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLME-KSGCAPSSRLLNNIIRV 762
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK-KEEVYRVWNLYR 344
++ G++ KA L +V+ + + +LSL+ GK +E++ + +Y+
Sbjct: 763 LLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAMYQ 816
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 152/351 (43%), Gaps = 15/351 (4%)
Query: 103 SLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASA 162
SL V+K L +R A E+++ + G + A A I D + K +
Sbjct: 105 SLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVI--DGLLKAGRIEDG 162
Query: 163 EDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTL 220
F +S + R Y +++ +A+M +A + ++M KG ++ Y ++
Sbjct: 163 LKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDG 222
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSY-NIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
+ K + DE ++ M KG +Y +I C E E + ++ ++
Sbjct: 223 FSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR--ERGCE 280
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
P F+++ + Y+ G+ E+A + L + +R D + Y L+ L S G+ E V
Sbjct: 281 PGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHV 340
Query: 340 WN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMS 395
++ + + P L Y +I + ++IG++E +I E L KS P N +M
Sbjct: 341 FDSMIEKGCAPDA--LTYGTIIQNFSKIGNVEAAGEILE--LMAKSGVGPDCFAYNSLMD 396
Query: 396 WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
YVK D+A ++ ++ G KPN+ ++ L G ++ + A S K
Sbjct: 397 GYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 447
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 131/331 (39%), Gaps = 57/331 (17%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQ---LDLIAKVHGVASAEDFFLSL------PD 171
R + A +V M RG A D + +DL+ V A F S+ PD
Sbjct: 298 RAEEAYQVLTEMTARG-----CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPD 352
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L YG ++ + + A +++ M G YN +M Y+K++ D+
Sbjct: 353 AL----TYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAF 408
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ M GI+ + ++N+ M G+F+ K D+A ++
Sbjct: 409 GVYDRMVASGIKPNAVTFNVL------------MHGLFKDGKTDRAF-----------SL 445
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
+ +M + E+ +L V Y L+ G G+ E + + + R + P
Sbjct: 446 FKEMLEKEEVPPTL------------VSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPE 493
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
Y ++I SLA+ G I +K+ E+ + + + D + + +++ + D A
Sbjct: 494 CHT--YTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDV 551
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
F +++ G PN +++ L G R L+
Sbjct: 552 FQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 582
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 163/349 (46%), Gaps = 10/349 (2%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
+T + C VVK + + ++ ALEV++W+N R + AAI L ++ + + + A
Sbjct: 154 MTPTDYCFVVKSVGQ-ESWQRALEVFEWLNLRHWHSPNARMVAAI-LGVLGRWNQESLAV 211
Query: 164 DFFLSLPDTLKDR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
+ F T+ DR +VY A++ Y R+ A+ L+D MR +G + +N ++ +
Sbjct: 212 EIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARL 271
Query: 223 KIKEY--DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
K + V ++ ++ G+R D +YN LS+C + E VFE M+ + P
Sbjct: 272 KSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRC-QP 330
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
+ T++ M ++Y + G +AE +E + D V Y+ LL + E+V V+
Sbjct: 331 DLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVY 390
Query: 341 NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS-SYDPRIANLMMSWYVK 399
+ + G + Y+ +I + G ++ +++++ + + D +++ K
Sbjct: 391 QQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGK 450
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA---LSCL 445
+A A + +++ G KP ++ L G+ + + EA SC+
Sbjct: 451 ANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/336 (17%), Positives = 144/336 (42%), Gaps = 5/336 (1%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
++ N + G S T + +++ L R + V + + + G F++S S + LD
Sbjct: 808 AIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMG--FKISKSSILLMLD 865
Query: 152 LIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
A+ + + S+ L R+Y ++ + + +AE+++ +M + + V
Sbjct: 866 AFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKV 925
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+N M+ +Y I++Y + + +KE G+ D +YN + E+ +
Sbjct: 926 ELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLM 985
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+ M+ + ++P T+ ++ + + K +E+AE+ + S+ DR YH ++ +
Sbjct: 986 QQMR-NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRD 1044
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
G + ++ + ++ T H ++ S + G+ + EK+ + +
Sbjct: 1045 SGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLP 1104
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
+ ++ Y++ ++ + +EG +P+ W
Sbjct: 1105 YSSVIDAYLRSKDYKSGIERLLEMKKEGLEPDHRIW 1140
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 101/244 (41%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A+++ Y R + AE L ++ KG++ ++ YN ++ + + + ++V+ +
Sbjct: 331 DLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVY 390
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M++ G D +YN + G QG + +++ MK NP+ T++ + K
Sbjct: 391 QQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGK 450
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+ +A + + Y L+ Y GK+EE ++ NL
Sbjct: 451 ANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLA 510
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y M+ L R + ++ + +S + + LM+ +KE D + +
Sbjct: 511 YSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDME 570
Query: 415 EEGG 418
E G
Sbjct: 571 ELCG 574
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 130/274 (47%), Gaps = 14/274 (5%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+R + +L ++ + + L ++M D G + + YN+++ Y K DE +
Sbjct: 7 NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
EM G+ +Y+YN L++ C E ME +F+ M +K P+ T+ST+ +
Sbjct: 67 EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAME-LFKTM-AEKGFEPDVVTYSTIISGLC 124
Query: 294 KMGQVEKAEESL-RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVF 347
K G+V +A E L ++ R + V Y+ L++ + K E + R + L +
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALIN---GLCKDENIERAYKLLEEMASKGYV 181
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P N+ Y+ ++S L R+G + ++ F+ S S D N ++ KEG D+A
Sbjct: 182 P--DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAM 239
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F +I +G P++ ++ ++ G R+ + EA
Sbjct: 240 KLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 273
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 125/275 (45%), Gaps = 10/275 (3%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD ++ Y L++ Y + A L ++M G YN ++ + K + E
Sbjct: 41 PDGIE----YNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKE 96
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ M EKG DV +Y+ +S C + TE +E +F M +++ + N ++ +
Sbjct: 97 AMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKM-IERGCSANTVAYNAL 155
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSV 346
K +E+A + L + S+ D + Y+ +LS +GK E + ++ R
Sbjct: 156 INGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGY 215
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
P V + Y+ ++ +L + G + K+F++ ++ D N ++ ++ N D+A
Sbjct: 216 SPDV--VAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 273
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
E F ++ G PN ++ + GH R +++ +A
Sbjct: 274 EEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDA 308
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 28/268 (10%)
Query: 109 LCRV--VKELRKF------RRYKHALEVYDWMNNRGERFRLSASDAAIQL--DLIAKVHG 158
LCR+ V E ++F R Y + Y+ + + ++ +D A++L D+IAK +
Sbjct: 194 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLD--ALYKEGKTDEAMKLFKDVIAKGY- 250
Query: 159 VASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
+PDT+ Y ++L R AE + KM G A + Y++++
Sbjct: 251 ----------MPDTV----TYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVL 296
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
+ + + K+ D+ ++ EM + G DV +YNI L +K +F M VD
Sbjct: 297 SGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM-VDNGC 355
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
P+ ++S + K +V A R+ R D V ++ L+ GK +E
Sbjct: 356 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 415
Query: 339 VWNLYRSVFPGVTNLGYHAMISSLARIG 366
+ + + Y+ +++ L + G
Sbjct: 416 LLDQMTCSGCAPDYVAYNTLMNGLRKQG 443
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 111/269 (41%), Gaps = 7/269 (2%)
Query: 153 IAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ ++ V+ A+ FF S+P D Y LL+A + A L + KGY
Sbjct: 194 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPD 253
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
++ YN ++ + DE E M +M G + +Y+I LS + V E
Sbjct: 254 TVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE 313
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M AV P+ T++ + K V+KA E + D V Y +L+
Sbjct: 314 EMSKIGAV-PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 372
Query: 331 GKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
K + +++ + R + P V ++ ++ L + G ++ + + ++ + D
Sbjct: 373 NKVHDARVLFDRMIERKLVPDVVT--FNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYV 430
Query: 389 IANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
N +M+ K+G +A+ ++ E+G
Sbjct: 431 AYNTLMNGLRKQGRHIQADRLTQAMKEKG 459
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
I LD + K + V A + F ++ D D Y +LN + +A +L D+M ++
Sbjct: 329 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 388
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ +N++M K + DE + ++ +M G D +YN ++ QG +
Sbjct: 389 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQA 448
Query: 266 EGVFELMK 273
+ + + MK
Sbjct: 449 DRLTQAMK 456
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 75/166 (45%), Gaps = 5/166 (3%)
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ +PN TF + + K G++ + ++ D + Y+ L+ Y G+ +E
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLM 393
R++ SV + Y++++++ + ++ ++F+ + ++P + + +
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTM--AEKGFEPDVVTYSTI 119
Query: 394 MSWYVKEGNFDKA-EAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+S K G +A E F+ +IE G N+ ++ L G ++ I
Sbjct: 120 ISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENI 165
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 1/264 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ALLN + A L+ K+ D G + Y ++ K K E + EM
Sbjct: 202 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 261
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+G+ LD Y + G + V++ M V P+ T STM K G+
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV-PDVVTLSTMIDGLCKAGR 320
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ A + +E+R + V Y L+ K + + + F + Y+
Sbjct: 321 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 380
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I L + GD+E F+E L D N+++S + K GN D A F+ +
Sbjct: 381 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSH 440
Query: 418 GKPNSTSWETLAEGHIRERRILEA 441
PN ++ TL G + R++ +A
Sbjct: 441 CSPNVVTYGTLISGLCKRRQLTKA 464
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 136/332 (40%), Gaps = 48/332 (14%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRG---ERFRLSASDAAIQLDLIAKVHGVASAEDFFLS 168
+++ L + + A VY M ++G + LS +D + K + +A F S
Sbjct: 276 LIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST-----MIDGLCKAGRIGAAVRIFKS 330
Query: 169 LP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ + VY AL++ +AR A ++ +M+ ++ YN+++ K +
Sbjct: 331 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 390
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+ + EM E G + DVY+YNI +S G+T+ GVF+ M +PN T+
Sbjct: 391 VEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMS-SSHCSPNVVTYG 449
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
T+ + K Q+ KA + ++ R D
Sbjct: 450 TLISGLCKRRQLTKASLYFQHMKERGCPPD------------------------------ 479
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
+ Y +++ L + G +EG +F+E + + + ++ K D+A
Sbjct: 480 -----SFVYSSLVDGLCKSGKLEGGCMLFDE-MERSGVANSQTRTRLIFHLCKANRVDEA 533
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+ FN+I +E G P+ ++ ++ I+ ++
Sbjct: 534 VSLFNAIRKE-GMPHPYAYNSIISTLIKSAKV 564
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 128/322 (39%), Gaps = 66/322 (20%)
Query: 181 ALLNAYVRA-RMRGNAELLIDKMRDKGYAVHSLP----YNVMMTLYMKIKEYDEVESMVS 235
ALL+ + R R R LL +++ A LP +NV++T Y +E +E +++
Sbjct: 64 ALLDVFARTKRHREAGNLLKNEL-----ATTFLPDVETWNVLITGYCLAREPEEAFAVIR 118
Query: 236 EMKE------------------------------------KGIRLDVYSYNI---WLSSC 256
EM+E G +D+++Y WL+
Sbjct: 119 EMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLA-- 176
Query: 257 GSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+K++ LM+ P T++ + KMG++E+A + LR++
Sbjct: 177 ----KNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV-FPGVT--NLGYHAMISSLARIGDIEGM 371
D V Y SL +GK++ + + L++ + G+ + Y A+I L + G I
Sbjct: 233 PDVVTY---TSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQA 289
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+++ S D + M+ K G A F S+ G PN + L G
Sbjct: 290 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 349
Query: 432 HIRERRI---LEALSCLKGAFA 450
+ R++ LE L+ +K AF
Sbjct: 350 LCKARKMDCALEMLAQMKKAFC 371
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 146/339 (43%), Gaps = 27/339 (7%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K A +++ M RG + +I + G A D L L D
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRK------PDSITFTALMDALGKAGRVDDALELLD 243
Query: 172 TLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
+K+R V Y AL+ + + A L+D+M+ G + Y+ ++T +K
Sbjct: 244 EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKAS 303
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ DE ++ +M+++G D +YN ++ G G +F+ MK K NP+ T+
Sbjct: 304 QLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK-SKGCNPDVVTY 362
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
ST+ T K +VE A +ES D Y ++++ G G+ ++ R+++ R
Sbjct: 363 STLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRG 422
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNF 403
+ Y+A ++SL R G + KIFE+ +S P +A + ++ K
Sbjct: 423 KGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM--KESGLLPDVATYDALLLGLSKTKEV 480
Query: 404 DKAEAFFNSIIEEGGKPNS----------TSWETLAEGH 432
D A +IE+G +S TSW + E H
Sbjct: 481 DDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAH 519
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 159/375 (42%), Gaps = 25/375 (6%)
Query: 84 DNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSA 143
D + + + + ++ GR ++ L K R ALE+ D M RG + +
Sbjct: 197 DGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVT 256
Query: 144 SDAAIQLDLIAKVHGVASAEDFFLSLPDTLK------DRRVYGALLNAYVRARMRGNAEL 197
+A LIA V + + +L D +K D Y L+ ++A A
Sbjct: 257 YNA-----LIAGFGKVGDLVEAY-NLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
++ KM +G ++ YN ++ K ++ + MK KG DV +Y+ +++ G
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALG 370
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
E +FE M+ + P+ T+ ++ T+ K GQV+ A+ + + D
Sbjct: 371 KAARVESACVLFEEME-SVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDV 429
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
+ Y+ L+ G G+ +E +++ + + P V Y A++ L++ +++ +
Sbjct: 430 ITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT--YDALLLGLSKTKEVDDACGLL 487
Query: 376 EEWLSVKSSYDP----RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+E + ++D ++ SW GN D+A +G P ++S+ L +
Sbjct: 488 KELIEQGCAFDSLKFDECLEILTSW----GNVDEAHELLQFANSKGLWPGASSYNALIDA 543
Query: 432 HIRERRILEALSCLK 446
+ R+ EA + L+
Sbjct: 544 LAKAGRVSEAFNTLE 558
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 141/331 (42%), Gaps = 9/331 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L + +++ ALEV M +G + L + + D + K A + D
Sbjct: 50 LINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLV--DCLGKAGQFDEALRLLAEMRD 107
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ D R Y L++ +A A L +MR++G + YN ++ K+ +
Sbjct: 108 NGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQK 167
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ EM+ G DV +Y+ ++ G G T K +F+ MK + P+ TF+ +
Sbjct: 168 AMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMK-RRGRKPDSITFTALM 226
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVF 347
K G+V+ A E L ++ R V Y+ L++ +G VG E Y + + +
Sbjct: 227 DALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCK 286
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P V Y +I+ L + ++ ++ ++ D N +++ K G + A
Sbjct: 287 PDVVT--YSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAG 344
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
F+ + +G P+ ++ TL + R+
Sbjct: 345 RLFDRMKSKGCNPDVVTYSTLITALGKAARV 375
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 139/303 (45%), Gaps = 11/303 (3%)
Query: 150 LDLIAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
L+ +AK A+ F L PD + Y L+N+ RA A ++ +M+
Sbjct: 16 LNALAKAGQCEEAQLLFEELKAAKWTPDVVS----YSCLINSLGRAGKWEAALEVVAEMQ 71
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
KG + YN ++ K ++DE +++EM++ G DV +YN +S+ G G
Sbjct: 72 AKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLS 131
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+ +F M+ ++ P+ T++++ K+G+ +KA E L +E D + Y L
Sbjct: 132 EAFTLFAEMR-ERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSL 190
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
++ G G+ + ++++ + ++ + A++ +L + G ++ ++ +E
Sbjct: 191 ITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
N +++ + K G+ +A + + G KP+ ++ L G I+ ++ EA
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310
Query: 444 CLK 446
LK
Sbjct: 311 VLK 313
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 115/256 (44%), Gaps = 5/256 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ A +A +A +L ++M G Y ++T+ K + D+ + +
Sbjct: 358 DVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLF 417
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM+ KG+ DV +YN +L+S G G ++ +FE MK + + P+ T+ + K
Sbjct: 418 SEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMK-ESGLLPDVATYDALLLGLSK 476
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTN 352
+V+ A L+ + + D + + L + S G +E + + S ++PG ++
Sbjct: 477 TKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASS 536
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+A+I +LA+ G + E+ D + ++S + G D A
Sbjct: 537 --YNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEE 594
Query: 413 IIEEGGKPNSTSWETL 428
+ + G K + S+ L
Sbjct: 595 MSKRGLKLSPRSYSNL 610
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 89/235 (37%), Gaps = 34/235 (14%)
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKV------------------------------ 274
+V +YN L++ G E+ + +FE +K
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 275 ----DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
K PN T++T+ K GQ ++A L + D Y+ L+S G
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
G+ E + ++ R Y+++I L ++G + ++ EE D
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ +++ K+G KA F + G KP+S ++ L + + R+ +AL L
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 168/402 (41%), Gaps = 29/402 (7%)
Query: 68 RPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKW-ELCRVVKELR--------- 117
R M K A R++ ++ L N+ G S +W E RV KE+R
Sbjct: 270 RAMDKAEAFLRQM--VNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV 327
Query: 118 ----------KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF- 166
K+ + K A +V+D M +G+ + + I L+ A + D F
Sbjct: 328 ALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY--TIMLNGYATKGCLVDMTDLFD 385
Query: 167 LSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
L L D + D + L+ AY M A ++ ++MRD G H + Y ++ +I
Sbjct: 386 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM-EGVFELMKVDKAVNPNWTT 284
+ D+ ++M ++G+ D Y+Y+ + + GS K E + E+M + + +
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM--NNGMRLDIVF 503
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
F ++ K+G+V A+ + D V Y+ L+ Y VGK E+ RV++
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S +GY +++ +IG I+ +F E L + N+++ + G
Sbjct: 564 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 623
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
A+ F+ + E G N ++ + G + R EA+ K
Sbjct: 624 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 665
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 131/342 (38%), Gaps = 71/342 (20%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++++A +AR AE + +M +KG + YN ++ Y ++ E +
Sbjct: 255 DLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVF 314
Query: 235 SEMKEKGI-----------------------------------RLDVYSYNIWLSSCGSQ 259
EM+ + I DV+SY I L+ ++
Sbjct: 315 KEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATK 374
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G M +F+LM D + P+ TF+ + Y G ++KA + V
Sbjct: 375 GCLVDMTDLFDLMLGD-GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVT 433
Query: 320 YHYLLSLYGSVGKKEEVYRVWN------------LYRSVFPGVTNLG------------- 354
Y +++ +GK ++ +N Y + G G
Sbjct: 434 YMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM 493
Query: 355 ----------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ ++I++L ++G + + IF+ ++V D + N++M Y G +
Sbjct: 494 NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKME 553
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
KA F++++ G +PN + TL G+ + RI E LS +
Sbjct: 554 KALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 595
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 130/293 (44%), Gaps = 10/293 (3%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDT-LK-DRRVYGALLNAYVRARMRGNA-ELLIDKMR 203
AI +D + H A FF L T L+ D + LL + A+ A ++L+ +
Sbjct: 117 AILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTP 176
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL--DVYSYNIWLSSCGSQGS 261
+ G YN+++ + + + ++ M E G DV +YN + +G
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
K +F+ M V + + P+ T+S++ K ++KAE LR++ ++ D Y+
Sbjct: 237 VNKACDLFKEM-VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYN 295
Query: 322 YLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
L+ Y S G+ +E RV+ R S+ P V L + ++ SL + G I+ +F+
Sbjct: 296 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVAL--NTLMGSLCKYGKIKEARDVFDTMA 353
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ D +M++ Y +G F+ ++ +G P+ ++ L + +
Sbjct: 354 MKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 406
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++ A A++ +M + G A++ Y++++ K + +DE + E+
Sbjct: 608 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 667
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +++D+ + N ++ E+ + +F + V P T+S M T +K G
Sbjct: 668 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV-PCAVTYSIMITNLLKEGL 726
Query: 298 VEKAEESLRRVESRITGRD-RVPYHYLLSLYGSVGKKEEVYR 338
VE+AE+ +++ D R+ H + L KK E+ R
Sbjct: 727 VEEAEDMFSSMQNAGCEPDSRLLNHVVRELL----KKNEIVR 764
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 146/310 (47%), Gaps = 19/310 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ Y +A NA L ++M G + + Y ++ K E D ++
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM++KG++L+V YN ++ G+ E+ + + M+V ++P+ T++T+ Y +
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV-AGIDPDAITYTTVIDAYCR 550
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV--WNLYRSVFPGVTN 352
+G ++KA + L+ + R V ++ L++ + +G E+ R+ W L + + P
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA-- 608
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+ ++ + KI++ + + D N+++ + K N +A +
Sbjct: 609 ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKE 668
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA---LSCLKG-AFAAEGAKSWRPKPVNVINFF 468
+IE+G P TS+ L + ++++ILEA ++G A+G + NFF
Sbjct: 669 MIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADG---------EIYNFF 719
Query: 469 -KACEEESDM 477
C EE D+
Sbjct: 720 VDMCYEEGDV 729
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 9/288 (3%)
Query: 149 QLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
+L + + H + DF S PD + Y +++ Y A L+D M+ KG
Sbjct: 270 RLGKVKEAHRLLMQMDFRSSTPDVVS----YSTVIDGYCHLGELKKALKLMDDMQIKGLK 325
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ YN ++ L KI + E E ++ EM + I D Y + G
Sbjct: 326 PNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKW 385
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
F+ M + K ++P++ T++T+ + + G+V + + + SR D V Y L+ +Y
Sbjct: 386 FDEM-LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444
Query: 329 SVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
G+ + + N + + P + G A+I L + G+++ ++ +E +
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYG--ALIDGLCKHGELDTANELLDEMRKKGLQLN 502
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
I N M++ K GN ++A + G P++ ++ T+ + + R
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 116/253 (45%), Gaps = 9/253 (3%)
Query: 184 NAYVRARMRGNAE---LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
NA++ +R+ N+E + I + G + ++ YN+++ ++ + E ++ +M +
Sbjct: 229 NAFL-SRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFR 287
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
DV SY+ + G +K + + M++ K + PN T++++ + K+G+ +
Sbjct: 288 SSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQI-KGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAM 358
AE+ LR + S+ D V Y L+ + +G + ++ L + + P + Y +
Sbjct: 347 AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY--ITYTTL 404
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I + G + + +F E +S D ++ Y K G A + N +++ G
Sbjct: 405 IQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464
Query: 419 KPNSTSWETLAEG 431
PN ++ L +G
Sbjct: 465 TPNIVTYGALIDG 477
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 111/238 (46%), Gaps = 7/238 (2%)
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
K + + + +++ + ++I E ++ ++ G+ + V S N +LS +
Sbjct: 184 KYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNS---- 239
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMY--IKMGQVEKAEESLRRVESRITGRDRVPYHY 322
EG+ +KV +W T S +Y ++G+V++A L +++ R + D V Y
Sbjct: 240 -EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
++ Y +G+ ++ ++ + + Y+++I L +IG EK+ E +S K
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
D + ++ + K G+ A +F+ ++ + P+ ++ TL +G + +++E
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIE 416
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ + +AR A L +M +KGY YN ++ + K K+ E +
Sbjct: 642 DSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELF 701
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
EM+ G+ D YN ++ C +G E
Sbjct: 702 EEMRGHGLVADGEIYNFFVDMCYEEGDVE 730
>gi|297843920|ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
gi|297335683|gb|EFH66100.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 163/391 (41%), Gaps = 45/391 (11%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S+ L+ + R L +L ++++ R++ ++++DWM G + +S + I+
Sbjct: 83 SSDFLSSLHRLERVLKVQDLNVILRDFGISGRWQDLIQLFDWMQQHG-KISVSTYSSCIK 141
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVY--GALLNAYVRARMRGNAELLIDKMRDKGY 207
V+ A + + S+PD VY ++L+ V+ + L D+M+ G
Sbjct: 142 F---VGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRGGL 198
Query: 208 AVHSLPYNVMMTLYMKIKE-YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
+ YN ++ +K+K Y + ++ E+ GI++D Y L+ C S G E+ E
Sbjct: 199 KPDVITYNTLLAGCIKVKNGYPKAVELIGELPHNGIQMDSVMYGTVLAICASNGRCEEAE 258
Query: 267 GVFELMKVD--------------------------------KAVN--PNWTTFSTMATMY 292
+ MK + K++ PN +T+ +Y
Sbjct: 259 NFIQQMKAEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY 318
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
IK G +++ E L +ES + +PY L+ GK EE +++ + GV +
Sbjct: 319 IKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKG--KGVKS 376
Query: 353 LGY--HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
GY MIS+L R E +++ + + D + N M+ Y + G +
Sbjct: 377 DGYANSIMISALCRSKRFEEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMM 436
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ E+ P+ ++ L + I+E+ L A
Sbjct: 437 KKMDEQAIIPDYNTFHILIKYFIKEKLHLLA 467
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 131/288 (45%), Gaps = 25/288 (8%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LPD + + G+L Y + + A + D M KG YN+M+ Y
Sbjct: 324 LPDVVTLSMLMGSLCK-YGKIK---EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 379
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
++ + M GI D Y++N+ + + + G +K +F M+ D V P+ T+ T+
Sbjct: 380 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR-DHGVKPDVVTYRTV 438
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL---SLYGSVGKKEEVYRVWNLYRS 345
++G+++ A E ++ + D+ Y+ L+ +GS+ K +E+
Sbjct: 439 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL--------- 489
Query: 346 VFPGVTNLGYH-------AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
+ N G H ++I++L ++G + + IF+ ++V D + N++M Y
Sbjct: 490 -ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYC 548
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G +KA F++++ G +PN + TL G+ + RI E LS +
Sbjct: 549 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 596
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 171/402 (42%), Gaps = 29/402 (7%)
Query: 68 RPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKW-ELCRVVKELR--------- 117
R M K A R++ ++ L + N+ G S +W E RV KE+R
Sbjct: 271 RAMDKAEAFLRQM--VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 328
Query: 118 ----------KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF- 166
K+ + K A +V+D M +G+ + + + I L+ A + D F
Sbjct: 329 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN--IMLNGYATKGCLVDMTDLFD 386
Query: 167 LSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
L L D + D + L+ AY M A ++ ++MRD G + Y ++ +I
Sbjct: 387 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 446
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM-EGVFELMKVDKAVNPNWTT 284
+ D+ ++M ++G+ D Y+YN + + GS K E + E+M + ++ +
Sbjct: 447 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM--NNGMHLDIVF 504
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
FS++ K+G+V A+ + D V Y+ L+ Y VGK E+ RV++
Sbjct: 505 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 564
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S +GY +++ +IG I+ +F E L + ++++ + G
Sbjct: 565 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTV 624
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
A+ F+ + E G + ++ + G + R EA+ K
Sbjct: 625 PAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFK 666
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 128/293 (43%), Gaps = 10/293 (3%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGA--LLNAYVRARMRGNA-ELLIDKMR 203
AI +D + H A FF L T + A LL + A+ A ++L+ +
Sbjct: 118 AILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTP 177
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL--DVYSYNIWLSSCGSQGS 261
+ G Y++++ + + + ++ M E G +V +YN + +G
Sbjct: 178 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 237
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
K +F+ M V + + P+ T++++ K ++KAE LR++ ++ + Y+
Sbjct: 238 VNKACDLFKEM-VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYN 296
Query: 322 YLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
L+ Y S G+ +E RV+ R S+ P V L ++ SL + G I+ +F+
Sbjct: 297 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM--LMGSLCKYGKIKEARDVFDTMA 354
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ D N+M++ Y +G F+ ++ +G P+ ++ L + +
Sbjct: 355 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 407
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 51/304 (16%), Positives = 116/304 (38%), Gaps = 40/304 (13%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y L+ + A+ LI ++ + G + + ++ ++ K+ + +++
Sbjct: 466 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 525
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
G+ D YN+ + G EK VF+ M V + PN + T+ Y K
Sbjct: 526 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM-VSAGIEPNVVGYGTLVNGYCK 584
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK--------------------- 333
+G++++ R + R + Y ++ G+
Sbjct: 585 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICT 644
Query: 334 --------------EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
+E ++ R++ + + + MI + + +E + +F
Sbjct: 645 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI- 703
Query: 380 SVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
+S P + ++M++ +KEG ++AE F+S+ G +PNS + +++
Sbjct: 704 -SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 762
Query: 438 ILEA 441
I+ A
Sbjct: 763 IVRA 766
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 120/253 (47%), Gaps = 5/253 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+GAL++ +A AE+L+++M+ KG ++ + +N MM Y K DE + M+
Sbjct: 325 FGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIME 384
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
KG DV++YNI S E+ + V +M V+K V PN T +T +Y + G +
Sbjct: 385 RKGFEADVFTYNILASGLCKLHRYEEAKRVLNVM-VEKGVAPNVVTCATFIEIYCQEGNL 443
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY--RVWNLYRSVFPGVTNLGYH 356
+ E LR +E R + V Y+ L+ Y K ++ + + + + + P V Y
Sbjct: 444 AEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDV--FTYT 501
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++I + ++ K+F E L + + ++S KEG D+A ++ ++
Sbjct: 502 SLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRM 561
Query: 417 GGKPNSTSWETLA 429
G P+ +E L
Sbjct: 562 GLIPDDRVFEALV 574
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 163/384 (42%), Gaps = 36/384 (9%)
Query: 73 WNAIFRKLSLMDNPQLGSASVLNDW--EKG----GRSL-----TKWELCRVVKELRKFRR 121
+ +FR + DN A + D+ EKG GRS K ELC +R FRR
Sbjct: 119 CDMLFRVCA--DNRMFRDALKVFDYVMEKGLVVEGRSCFXKKCNKVELC-----VRFFRR 171
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRVY 179
M G R + I +D++ + V A++ ++ + Y
Sbjct: 172 ----------MVESG-RVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTY 220
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
LLNA V + R + ++ M +G + Y +++ Y + E E + EM E
Sbjct: 221 NTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCE 280
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+ + +DVY Y +S G+ + +F+ M + + + PN TF + + K GQ+E
Sbjct: 281 RNVEMDVYVYTSMISWNCRAGNVRRASALFDEM-ICRGIVPNTXTFGALISGVCKAGQME 339
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
AE L ++ + + V ++ ++ Y G +E +R+ ++ Y+ +
Sbjct: 340 AAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILA 399
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEEG 417
S L ++ E +++ + V+ P + + Y +EGN + E F +I + G
Sbjct: 400 SGLCKLHRYEEAKRVLN--VMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRG 457
Query: 418 GKPNSTSWETLAEGHIRERRILEA 441
PN ++ TL + + + ++ +A
Sbjct: 458 VVPNIVTYNTLIDAYSKNEKVKQA 481
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 112/268 (41%), Gaps = 9/268 (3%)
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
E + +++EM +G+ V++YN L++C + E ++ + LM+ + V + T+
Sbjct: 197 EVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVV-ASLVTY 255
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LY 343
+ + Y ++ +AE+ + R D Y ++S G +++ +
Sbjct: 256 TILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMIC 315
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
R + P G A+IS + + G +E E + EE + I N MM Y K G
Sbjct: 316 RGIVPNTXTFG--ALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMM 373
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVN 463
D+A + + +G + + ++ LA G + R EA K K P V
Sbjct: 374 DEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEA----KRVLNVMVEKGVAPNVVT 429
Query: 464 VINFFKACEEESDMGSKEAFVALLRQPG 491
F + +E ++ E F+ + + G
Sbjct: 430 CATFIEIYCQEGNLAEPERFLRNIEKRG 457
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 158/347 (45%), Gaps = 9/347 (2%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
P GS + D K SL + L V KE + ++ +L ++ +M R + +
Sbjct: 80 PPRGSIARCLDPFKNKLSLNDFAL--VFKEFAQRGDWQRSLRLFKYMQ-RQIWCKPNEHI 136
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYG--ALLNAYVR-ARMRGNAELLIDKM 202
I + L+ + + + F +P R VY A++NAY R + + ELL + M
Sbjct: 137 HTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELL-NGM 195
Query: 203 RDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
+ + + L YN ++ + +++ + + +EM+ +GI+ DV +YN L +C +G
Sbjct: 196 KQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGL 255
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
++ E VF M + + P+ T+S + + K+ ++EK E LR +E D Y+
Sbjct: 256 GDEAEMVFRTMN-ESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYN 314
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
LL Y +G +E V+ ++ Y +++ + G + + +F E
Sbjct: 315 VLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVS 374
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ D N+++ + + G F + F+ + EE +PN ++E L
Sbjct: 375 NTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGL 421
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 122/297 (41%), Gaps = 40/297 (13%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y LL A + AE++ M + G Y+ ++ + K+ ++
Sbjct: 238 PDVI----TYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEK 293
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
V ++ EM+ G D+ SYN+ L + GS ++ GVF M+ V N T+S +
Sbjct: 294 VSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCV-ANAATYSVLL 352
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-------- 341
+Y K G+ + + ++ T D Y+ L+ ++G G +EV +++
Sbjct: 353 NLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVE 412
Query: 342 -----------------LYRSVFPGVTNLGYHAMI-SSLARIGDIE--GMEKIFEEWL-- 379
LY + ++ ++ SS A G IE G ++EE L
Sbjct: 413 PNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVM 472
Query: 380 -----SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
V S+ N ++ + + G + +AEA + + E G K + S+ + E
Sbjct: 473 FNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEA 529
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 112/248 (45%), Gaps = 38/248 (15%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+ Y ++ A+ +A + A ++ + M + G YN ++ + + Y E E+++S
Sbjct: 451 KAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSR 510
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKM 295
M E G++ DV+S+N + + G E E V ++++KA PN T + ++Y
Sbjct: 511 MNESGLKRDVHSFNGVIEAFRQGGQYE--EAVKSYVEMEKANCEPNELTLEAVLSIYCSA 568
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G V++ EE + +++ + Y +L+LY K + + +NL
Sbjct: 569 GLVDEGEEQFQEIKASGILPSVMCYCMMLALY---AKNDRLNDAYNL------------I 613
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA------- 408
AMI+ R+ DI ++ + +K +D +W + E FDK +
Sbjct: 614 DAMIT--MRVSDI---HQVIGQM--IKGDFDDE-----SNWQIVEYVFDKLNSEGCGLGM 661
Query: 409 -FFNSIIE 415
F+N+++E
Sbjct: 662 RFYNALLE 669
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
+L + + + +G ++ +F+ M+ PN + M T+ + G ++K
Sbjct: 95 KLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCR 154
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMIS 360
E + S R Y +++ YG G+ + N + V P + L Y+ +I+
Sbjct: 155 EVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSI--LTYNTVIN 212
Query: 361 SLARIG-DIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ AR G D EG+ +F E D N ++ G D+AE F ++ E G
Sbjct: 213 ACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIV 272
Query: 420 PNSTSWETLAEGHIRERRI 438
P+ ++ L + + R+
Sbjct: 273 PDINTYSYLVQTFGKLNRL 291
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 167/379 (44%), Gaps = 16/379 (4%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
+I N + M G SVL K G L ++K L + K AL +
Sbjct: 94 LITLNILINCFCHMGQITFG-FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFH 152
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK--DRRVYGALLNAYV 187
D + +G F+L+ A ++ + K+ +A F + L D +Y +++A
Sbjct: 153 DKLLAQG--FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMC 210
Query: 188 RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY 247
+ ++ A L +M KG + + YN ++ + + + E +++EM K I +VY
Sbjct: 211 KYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVY 270
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
+YNI + + +G ++ + V +M + V P+ T+ST+ Y + +V+KA+
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVM-LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSL 362
+ D Y L++ + K + V NL+ +++ PG+ Y ++I L
Sbjct: 330 MSLMGVTPDVHTYTILINGF---CKNKMVDEALNLFKEMHQKNMVPGIVT--YSSLIDGL 384
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
+ G I + + +E D + ++ K G+ D+A A FN + ++ +PN
Sbjct: 385 CKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNI 444
Query: 423 TSWETLAEGHIRERRILEA 441
++ L +G + R+ +A
Sbjct: 445 FTFTILLDGLCKGGRLKDA 463
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/305 (17%), Positives = 124/305 (40%), Gaps = 40/305 (13%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ +L+++ + + A L ++ KG + N+++ + + + S+++++
Sbjct: 62 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++G D + N + +G +K + + + + N +++T+ K+G
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL-LAQGFQLNQVSYATLINGVCKIGDT 180
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLS--------------------------------- 325
A + LR+++ R+T D V Y+ ++
Sbjct: 181 RAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTL 240
Query: 326 LYG--SVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+YG VGK +E + N + +++ P V Y+ ++ +L + G ++ + + L
Sbjct: 241 IYGFCIVGKLKEAIGLLNEMVLKTINPNVYT--YNILVDALCKEGKVKEAKSVLAVMLKA 298
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D + +M Y KA+ FN++ G P+ ++ L G + + + EA
Sbjct: 299 CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEA 358
Query: 442 LSCLK 446
L+ K
Sbjct: 359 LNLFK 363
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 169 LPDTLKDRR------VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
L D ++DR Y +L++ + A L +KM+D+ + + +++
Sbjct: 396 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLC 455
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
K + + + ++ KG L+VY+YN+ ++ QG E+ + M+ D PN
Sbjct: 456 KGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME-DNGCIPNA 514
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESR 311
TF T+ K + +KAE+ LR++ +R
Sbjct: 515 FTFETIIIALFKKDENDKAEKLLRQMIAR 543
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 115/265 (43%), Gaps = 47/265 (17%)
Query: 210 HSLP---YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS----- 261
H+ P +N ++ + K+K Y S+ ++ KGI+ D+ + NI ++ G
Sbjct: 55 HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 262 ------------------TEKMEGVFELMKVDKAVN-----------PNWTTFSTMATMY 292
++G+ +V KA++ N +++T+
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 174
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV-FPGVT 351
K+G A + LR+++ R+T D V Y+ ++ ++ K + V + L+ + G++
Sbjct: 175 CKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIID---AMCKYQLVSEAYGLFSEMAVKGIS 231
Query: 352 N--LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAE 407
+ Y+ +I +G ++ + E V + +P + N+++ KEG +A+
Sbjct: 232 ADVVTYNTLIYGFCIVGKLKEAIGLLNEM--VLKTINPNVYTYNILVDALCKEGKVKEAK 289
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGH 432
+ +++ KP+ ++ TL +G+
Sbjct: 290 SVLAVMLKACVKPDVITYSTLMDGY 314
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 137/337 (40%), Gaps = 66/337 (19%)
Query: 110 CRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ---------------LDLIA 154
C +V L K + ++ LE+ D M R S S+AA+ L+L+
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLC----LRFSPSEAAVSSLVEGLRKRGKIEEALNLVK 356
Query: 155 KVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPY 214
+V + + F VY AL+++ + R AELL D+M G + + Y
Sbjct: 357 RVVDFGVSPNLF-----------VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV 274
++++ ++ + + D S + EM + G++L VY YN ++ G EG M +
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM-I 464
Query: 275 DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
+K + P T++++ Y G++ KA R+ +TG+ P Y
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKA----LRLYHEMTGKGIAPSIYT----------- 509
Query: 335 EVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
+ ++S L R G I K+F E + N+M+
Sbjct: 510 --------------------FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
Y +EG+ KA F + E+G P++ S+ L G
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 115/257 (44%), Gaps = 9/257 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+ + R A + +M +G + + Y V++ +K K+ ++ EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++G++ D Y + + G ++ G+++LM +++ PN T++ + K G V
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM-INEGCVPNEVTYTAVINGLCKAGFV 733
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLY--GSVGKKEEVYRVWNLYRSVFPGV--TNLG 354
+AE +++ + ++V Y L + G V ++ V L+ ++ G+
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAV----ELHNAILKGLLANTAT 789
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +I R G IE ++ + S D M++ + + KA +NS+
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 415 EEGGKPNSTSWETLAEG 431
E+G +P+ ++ TL G
Sbjct: 850 EKGIRPDRVAYNTLIHG 866
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 159/417 (38%), Gaps = 75/417 (17%)
Query: 152 LIAKVHGVASAEDFFLSLP---DTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMR 203
L A +HG+ F L++ D + D +Y ++ + + A+ +I M
Sbjct: 195 LSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHME 254
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN------------- 250
G V+ +PYNV++ K ++ E + ++ K ++ DV +Y
Sbjct: 255 ATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFE 314
Query: 251 ---------IWLSSCGSQGSTE----------KMEGVFELMK--VDKAVNPNWTTFSTMA 289
+ L S+ + K+E L+K VD V+PN ++ +
Sbjct: 315 IGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW------NLY 343
K + +AE R+ + V Y L+ ++ GK + L
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEG 401
SV+P Y+++I+ + GDI E E ++ K +P + +M Y +G
Sbjct: 435 LSVYP------YNSLINGHCKFGDISAAEGFMAEMINKK--LEPTVVTYTSLMGGYCSKG 486
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKP 461
+KA ++ + +G P+ ++ TL G R I +A+ E A+ W KP
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN-----EMAE-WNVKP 540
Query: 462 VNVINFFKACE---EESDMGSKEAFVALLRQPG-------YRKEKDYMSLIGLTDEA 508
N + + E EE DM F+ + + G YR + L G EA
Sbjct: 541 -NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 133/285 (46%), Gaps = 19/285 (6%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LPD + + G+L Y + + A + D M KG Y +M+ Y
Sbjct: 325 LPDVVTLNMLMGSLCK-YGKIK---EARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLV 380
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
++ + M GI D+Y++++ + + + G +K +F M+ D V P+ T++T+
Sbjct: 381 DMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMR-DHGVKPDVVTYTTV 439
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL---SLYGSVGK-KEEVYRVWN--- 341
++G+++ A E ++ + D+ YH L+ +GS+ K KE + + N
Sbjct: 440 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGM 499
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
VF + ++I++L ++G I + IF+ ++V D + +++M Y G
Sbjct: 500 RLDIVF-------FSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVG 552
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+KA F++++ G +PN + TL G+ + RI E LS +
Sbjct: 553 KMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFR 597
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 155/375 (41%), Gaps = 27/375 (7%)
Query: 95 NDWEKGGRSLTKW-ELCRVVKELR-------------------KFRRYKHALEVYDWMNN 134
N+ G S +W E RV KE+R K+ + K A +V+D M
Sbjct: 297 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAM 356
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFF-LSLPDTLK-DRRVYGALLNAYVRARMR 192
+G+ + + I L+ A + D F L L D + D + L+ AY M
Sbjct: 357 KGQNPDVFSYK--IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGML 414
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
A ++ ++MRD G + Y ++ +I + D+ ++M ++G+ D Y+Y+
Sbjct: 415 DKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 474
Query: 253 LSSCGSQGSTEKM-EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ + GS K E + E+M + + + FS++ K+G++ A+ +
Sbjct: 475 IQGFCTHGSLLKAKELILEIM--NNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNV 532
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
D V Y L+ Y VGK E+ RV++ S + Y +++ +IG I+
Sbjct: 533 GQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEG 592
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+F E L + N+++ G A+ F+ + E G N ++ + G
Sbjct: 593 LSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRG 652
Query: 432 HIRERRILEALSCLK 446
+ R EA+ K
Sbjct: 653 FFKNRCFDEAIFLFK 667
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 128/293 (43%), Gaps = 10/293 (3%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDT-LK-DRRVYGALLNAYVRARMRGNA-ELLIDKMR 203
AI +D + H A FF L T L+ D + LL + A+ A ++L+ +
Sbjct: 119 AILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTP 178
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL--DVYSYNIWLSSCGSQGS 261
+ G Y++++ + + + ++ M E G DV +Y + +G
Sbjct: 179 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGD 238
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
K +F+ M V + + P+ T+S++ K + KAE LR++ ++ D Y+
Sbjct: 239 VNKACDLFKEM-VQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYN 297
Query: 322 YLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
L+ Y S G+ +E RV+ R S+ P V L + ++ SL + G I+ +F+
Sbjct: 298 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL--NMLMGSLCKYGKIKEARDVFDTMA 355
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ D +M++ Y +G F+ ++ +G P+ ++ L + +
Sbjct: 356 MKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAY 408
>gi|297746078|emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 155/378 (41%), Gaps = 52/378 (13%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
W G + + + + LRK + K ALEV +W+ R +R D + L+
Sbjct: 77 FQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVV-RERPYRPKELDYSYLLEFT 135
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
K+HG++ E F +P ++ +Y L+ A + + + + KMR+ G+ + L
Sbjct: 136 TKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHPISYLV 195
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+N ++ L+ + ++++MK + V +YNI + ++ + E + VF MK
Sbjct: 196 FNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKVFGEMK 255
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ V PN ++ +AT + AE + VE ITG + L+ LYG +GK
Sbjct: 256 -QQQVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWSTLDVLIILYGYLGKP 314
Query: 334 EE-------------------------VYRVWNLYRSVFPGVTNLGYHAMISSLARI--- 365
+ +++ W +++ LG IS+ R
Sbjct: 315 TDLEPLVRNKVKKRVEINRAIQFNDICLFQTWEALKTL-----ELGKGLTISTRIRKSIP 369
Query: 366 ---------------GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
GD+E EK+FEE + + + N ++ YVK +D
Sbjct: 370 WLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIKAYVKAKVYDP--NLL 427
Query: 411 NSIIEEGGKPNSTSWETL 428
+I G +P++ ++ +
Sbjct: 428 RRMILGGARPDAETYSLM 445
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 122/296 (41%), Gaps = 7/296 (2%)
Query: 150 LDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+D + K V A+ F + D D Y L++ Y+ ++++M G
Sbjct: 203 IDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGL 262
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ Y +++ K E M KGI+ DV Y I L ++G+ +M
Sbjct: 263 EPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHS 322
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+LM V V+PN F+ M Y K +E+A ++ + D V + L+
Sbjct: 323 FLDLM-VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDAL 381
Query: 328 GSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+G+ ++ +N + V P + + +++ L +G E E++F E L
Sbjct: 382 CKLGRVDDAVLQFNQMINEGVTPNI--FVFSSLVYGLCTVGKWEKAEELFFEVLDQGICV 439
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D N +M EG +A+ + +I G +PN S+ TL GH RI EA
Sbjct: 440 DAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEA 495
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 113/250 (45%), Gaps = 5/250 (2%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
++L+ +M + G + YN ++ + + + ++ ++ EM ++GI +V +Y +
Sbjct: 145 TDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVID 204
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
++ +GVF+ M +D+ V P+ T++ + Y+ G+ ++ + L + +
Sbjct: 205 GLCKAQVVDRAKGVFQQM-IDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLE 263
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
D + Y LL G+ E ++ + + P V Y ++ A G + M
Sbjct: 264 PDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAI--YAILLHGYATKGALSEMH 321
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ + S + RI N+M Y K+ ++A FN + ++G P+ S+ L +
Sbjct: 322 SFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDAL 381
Query: 433 IRERRILEAL 442
+ R+ +A+
Sbjct: 382 CKLGRVDDAV 391
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/317 (18%), Positives = 132/317 (41%), Gaps = 44/317 (13%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + +GAL++A + +A L ++M ++G + ++ ++ + ++++
Sbjct: 369 PDVVS----FGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEK 424
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
E + E+ ++GI +D +N + + ++G + + + +LM + V PN +++T+
Sbjct: 425 AEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLM-IRVGVRPNVISYNTLV 483
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-------- 341
+ G++++A + L + S + Y LL Y + ++ Y ++
Sbjct: 484 AGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVT 543
Query: 342 ----LYRSVFPGVTNLG-----------------------YHAMISSLARIGDIEGMEKI 374
Y ++ G+ G Y+ +++ L + ++ K+
Sbjct: 544 PVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKM 603
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F S D N+M+ +K G + A F +I G P+ ++ +AE I
Sbjct: 604 FRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIE 663
Query: 435 ERRILEALSCLKGAFAA 451
E + E G F+A
Sbjct: 664 EGSLGE----FDGLFSA 676
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 101/257 (39%), Gaps = 1/257 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N + R A L +M D+G + + Y ++ K + D + +
Sbjct: 160 DVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVF 219
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M ++G++ D +YN + S G +++ + E M + P+ T++ + K
Sbjct: 220 QQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMST-HGLEPDCITYALLLDYLCK 278
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+ +A + + D Y LL Y + G E++ +L
Sbjct: 279 NGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRI 338
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ M + A+ IE IF + S D ++ K G D A FN +I
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMI 398
Query: 415 EEGGKPNSTSWETLAEG 431
EG PN + +L G
Sbjct: 399 NEGVTPNIFVFSSLVYG 415
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 3/236 (1%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ LID M G + + YN ++ + DE ++ M G++ + ++Y I L
Sbjct: 460 AQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLR 519
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE-SLRRVESRIT 313
+ +F M + K V P T++T+ + G+ +A E L + SR T
Sbjct: 520 GYCKARRVDDAYSLFREMLM-KGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSR-T 577
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
D Y+ +L+ +E ++++ S P + ++ ++ MI +L + G E
Sbjct: 578 KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMD 637
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
+F + D L+ ++EG+ + + F+++ + G PNS L
Sbjct: 638 LFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALV 693
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 87/214 (40%), Gaps = 10/214 (4%)
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWL---SSCGSQGSTEKMEGVFELM--KVDKAVNPNW 282
DE + E+ V ++N L S G ++E++ +F M + V PN
Sbjct: 31 DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
T+S + + +MG++E + + + + LL + +E + L
Sbjct: 91 CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150
Query: 343 YRSVF---PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
S F P V + Y+ +I+ R G +E +F E + + ++ K
Sbjct: 151 RMSEFGCPPDV--VAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCK 208
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
D+A+ F +I+ G KP++ ++ L G++
Sbjct: 209 AQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYL 242
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 148/335 (44%), Gaps = 8/335 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWM-NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP 170
++K L +R + ALE+ M ++ G R + +I ++ V + FL +
Sbjct: 167 LLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMI 226
Query: 171 D--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
D D Y +++ +A++ AE + +M D G+ ++ YN ++ Y+ I ++
Sbjct: 227 DRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWK 286
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
EV M+ EM +G++ D Y+Y L+ G + F+ M + K + P +T+ +
Sbjct: 287 EVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSM-IRKGIKPKVSTYGIL 345
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SV 346
Y G + + L + D ++ S Y G ++ ++N R +
Sbjct: 346 IHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGL 405
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
P V N Y A+I +L ++G ++ E F + ++ + + + N ++ +++A
Sbjct: 406 SPNVVN--YGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERA 463
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
E ++++G PN+ + TL R++E
Sbjct: 464 EELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEG 498
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 112/264 (42%), Gaps = 1/264 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG L++ Y +D M + G + +N+ + Y K D+ + ++M
Sbjct: 341 TYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 400
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ G+ +V +Y + + G + E F M +++ V PN F+++ + +
Sbjct: 401 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM-INEGVTPNIVVFNSLVYGLCTVDK 459
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E+AEE + + + + V ++ L+ +VG+ E R+ +L V Y
Sbjct: 460 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 519
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+IS G + EK+F+ +S+ S N ++ Y D A F ++ +G
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 579
Query: 418 GKPNSTSWETLAEGHIRERRILEA 441
P ++ T+ G + +R EA
Sbjct: 580 VTPGVVTYNTILHGLFQTKRFSEA 603
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 93/227 (40%), Gaps = 9/227 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL+ Y A +A L +M KG + YN ++ + K + E + + M
Sbjct: 551 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 610
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G + D+Y+YNI L+ ++ +F+ + K + N TF+ M +K G+
Sbjct: 611 INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL-CSKGLQLNIITFTIMIGALLKGGR 669
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E A + + + + V Y + G EE +++ + +A
Sbjct: 670 KEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 729
Query: 358 MISSLARIGDIEG----MEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
++ L GDI + K+ E SV++S +L+MS + +
Sbjct: 730 LVRRLLHRGDISRAGAYLSKLDERNFSVEAS----TTSLLMSIFTSD 772
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 8/210 (3%)
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA--VNPNWTTF 285
+ ++ ++ M E G D SY I L ++ E+ + +M D PN ++
Sbjct: 143 EAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSY 202
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
S + + GQV+K + R D V Y ++ + K + R +++
Sbjct: 203 SIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVID---GLCKAQLFDRAEGVFQQ 259
Query: 346 VFPG---VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ N Y+ +I IG + + ++ EE + D ++++ K G
Sbjct: 260 MIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGR 319
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+A FF+S+I +G KP +++ L G+
Sbjct: 320 CREARFFFDSMIRKGIKPKVSTYGILIHGY 349
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 115/281 (40%), Gaps = 42/281 (14%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AE L+ +M D+G +++ +N ++ + E ++ M+ G+R D +SY +S
Sbjct: 463 AEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLIS 522
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
G T++ E VF+ M V ++P T++T+ Y +++ A R + +
Sbjct: 523 GYCLTGRTDEAEKVFDGM-VSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVT 581
Query: 315 RDRVPYHYLL-------------SLYGSV---GKKEEVY----------------RVWNL 342
V Y+ +L LY ++ G K ++Y + +
Sbjct: 582 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKM 641
Query: 343 YRSVFPGVTNLG---YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
++S+ L + MI +L + G E +F + + L+ ++
Sbjct: 642 FQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIE 701
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
EG+ ++ ++ F+++ + G PNS L RR+L
Sbjct: 702 EGSLEEFDSLFSAMEKNGTAPNSQMLNALV------RRLLH 736
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/172 (16%), Positives = 75/172 (43%), Gaps = 3/172 (1%)
Query: 160 ASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
+ A++ +L++ + T D Y +LN ++ A + + KG ++ + + +M
Sbjct: 601 SEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIM 660
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ +K ++ + + + G+ +V +Y + + +GS E+ + +F M+
Sbjct: 661 IGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAME-KNG 719
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
PN + + + G + +A L +++ R + L+S++ S
Sbjct: 720 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTS 771
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 136/291 (46%), Gaps = 7/291 (2%)
Query: 159 VASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
V SA F L + + + +G+L+N + + M +LL+ +M+D+G +V+ YN
Sbjct: 259 VESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNN 318
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
++ K+ + + + EM E D+ +YN ++ S+G E+ E + E + +
Sbjct: 319 IIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLE-QTIRR 377
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
+ PN T++ + Y K G+ KA + L + + D + Y L+ G+ +
Sbjct: 378 GLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTA 437
Query: 337 YRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
+ + + R + P N+ Y+ +++ L + G + + + E L + D + ++
Sbjct: 438 LTIRDRMMNRGILPD-ANI-YNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLV 495
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+++ GN D+A+ F IIE+G P + + +G + + A+ C+
Sbjct: 496 DGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCI 546
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 121/263 (46%), Gaps = 1/263 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ Y + +A L K++ KG+ + ++ + K+ ++ ++ ++ EMK
Sbjct: 246 YNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMK 305
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++G+ ++V YN + + G K + + M + P+ T++T+ + G+V
Sbjct: 306 DRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMS-ENCCEPDLVTYNTLINHFCSRGEV 364
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
E+AE+ L + R +++ Y L+ Y G+ + + V + Y A+
Sbjct: 365 EEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGAL 424
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I L G+++ I + ++ D I N++M+ K+G A+ ++++
Sbjct: 425 IHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNI 484
Query: 419 KPNSTSWETLAEGHIRERRILEA 441
P++ + TL +G IR + EA
Sbjct: 485 APDAFVYATLVDGFIRHGNLDEA 507
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 141/336 (41%), Gaps = 22/336 (6%)
Query: 165 FFLSLPDTLK---------DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
F + DTLK D Y L+N + AE L+++ +G A + L Y
Sbjct: 328 FDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYT 387
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ Y K EY + + EM G+ +D+ SY + G + + + M ++
Sbjct: 388 PLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRM-MN 446
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ + P+ ++ + K G++ A+ L + + D Y L+ + G +E
Sbjct: 447 RGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDE 506
Query: 336 VYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+++ L + + PGV +GY+ MI ++ G ++ ++ D + +
Sbjct: 507 AKKLFQLIIEKGLDPGV--VGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTI 564
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR--ERRILEALSCLKGAFAA 451
+ YVK+ N + F ++++ KPN ++ +L G+ R E ++ E L F+
Sbjct: 565 IDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKL------FSM 618
Query: 452 EGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALL 487
+ +P V + +E+ +G ++ L+
Sbjct: 619 MRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELM 654
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++ + ++ M NA L IDKMR + ++ ++ Y+K + V + M
Sbjct: 526 YNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMV 585
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++ + +V +Y ++ +G T+ E +F +M+ + P+ T+S + + K ++
Sbjct: 586 KQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMR-SHGLKPSVVTYSILIGSFCKEAKL 644
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLS 325
KA + + +HYL++
Sbjct: 645 GKAVSYFELMLINKCTPNDAAFHYLVN 671
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 5/205 (2%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGAL 182
AL + D M NRG A+ + ++ + K ++ A+ + D D VY L
Sbjct: 437 ALTIRDRMMNRG--ILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATL 494
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
++ ++R A+ L + +KG + YNVM+ + K D + +M+
Sbjct: 495 VDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHH 554
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
D+++++ + Q + + +F LM V + PN T++++ Y + G+ + AE
Sbjct: 555 VPDIFTFSTIIDGYVKQHNMNAVLKIFGLM-VKQNCKPNVVTYTSLINGYCRKGETKMAE 613
Query: 303 ESLRRVESRITGRDRVPYHYLLSLY 327
+ + S V Y L+ +
Sbjct: 614 KLFSMMRSHGLKPSVVTYSILIGSF 638
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 118/280 (42%), Gaps = 26/280 (9%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV----HSLP----YNVMMTLYM 222
+T+ R +L AY L+DK + + V +SLP N ++ L +
Sbjct: 128 ETIPTREALSDVLCAYADVG-------LVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180
Query: 223 KIKEYDEVESMVSEMKEKG----IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
K + + + EM ++ I +D Y+ +I + +G E + E + K
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIE-SRWGKGC 239
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
PN ++T+ Y K G+VE A + ++++ + + L++ + +G E +
Sbjct: 240 VPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDL 299
Query: 339 VWNLYRSVFPGVTNLGYHAMISSLARIG-DIEGMEKIFEEWLSVKSSYDPRIA--NLMMS 395
+ + V Y+ +I + ++G DI+ + + E ++ +P + N +++
Sbjct: 300 LLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKE---MSENCCEPDLVTYNTLIN 356
Query: 396 WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+ G ++AE I G PN ++ L G+ ++
Sbjct: 357 HFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQ 396
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 132/290 (45%), Gaps = 10/290 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+A +A A +L+D+MR KG + YNV++ + DE +++S++
Sbjct: 200 YSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLP 259
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G + D +Y L S CGS+ E +E +F M +K P+ TF+T+ T + G
Sbjct: 260 SHGCKPDAVTYTPVLKSLCGSERWKE-VEELFAEMASNKCA-PDEVTFNTIVTSLCQQGL 317
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
V++A + + + D V Y +L VG+ ++ + + +S + Y
Sbjct: 318 VDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT 377
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ L I E E++ E + D N +++ ++G D+A + E G
Sbjct: 378 VLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENG 437
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINF 467
P+ ++ ++ +G ER I +A+ L +S+ KP +++ F
Sbjct: 438 CNPDIVTYNSIIDGLCNERCIDDAMELLS------NLQSYGCKP-DIVTF 480
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/275 (17%), Positives = 111/275 (40%), Gaps = 5/275 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + ++ + + + A ++D M + G + Y+ ++ + D+ ++
Sbjct: 301 DEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELL 360
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMY 292
S +K G + D +Y L S E+ E ELM V P+ TF+T+
Sbjct: 361 SRLKSYGCKPDTIAYTTVLKG---LCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASL 417
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
+ G V++A + + ++ D V Y+ ++ + ++ + + +S
Sbjct: 418 CQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDI 477
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ ++ ++ L + E E++ + D N +++ ++G +A
Sbjct: 478 VTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKI 537
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKG 447
+ E G PN +++ + + ++ + EAL L G
Sbjct: 538 MAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSG 572
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 9/267 (3%)
Query: 179 YGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSLP-YNVMMTLYMKIKEYDEVESMVSE 236
Y LLNAYV R +G E+L K+ +K V S+ Y++++ Y + +E E + E
Sbjct: 255 YNTLLNAYVGRKDRKGVDEIL--KLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEE 312
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M+EK I +DVY Y+ +S G+ ++ +F+ M + + PN T+ + K G
Sbjct: 313 MREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMS-QRDIVPNAHTYGALIGGVCKAG 371
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
Q+E AE L ++S+ + V ++ + Y GK +E R+ + Y+
Sbjct: 372 QMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYN 431
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM--SWYVKEGNFDKAEAFFNSII 414
+ + L ++ + + I V+ P + M Y KEGN +AE F +
Sbjct: 432 ILANGLCKLHRYDEAKCILNSM--VEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDME 489
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
++G PN ++ TL + + ++ ++ +A
Sbjct: 490 KKGEVPNIITYNTLIDAYCKKEKVKQA 516
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 128/265 (48%), Gaps = 5/265 (1%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+S D + + YGAL+ +A AE+L+ +M+ KG ++ + +N M Y + +
Sbjct: 348 MSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGK 407
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
DE + + M++KGI DV++YNI + ++ + + M V+K V PN TF+
Sbjct: 408 MDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSM-VEKGVKPNVVTFT 466
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYR 344
+Y K G + +AE R +E + + + Y+ L+ Y K ++ +++ + + +
Sbjct: 467 MFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINK 526
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ P + Y ++I +G ++ K+F E + + M+S KEG D
Sbjct: 527 GLLPDLYT--YSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRAD 584
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLA 429
+A ++ +++ G P+ + +L
Sbjct: 585 EAFKLYDEMMKIGLIPDDRVFTSLV 609
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 11/211 (5%)
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+DE + ++EKG+ ++ S + L + G + F M + +
Sbjct: 161 FDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLT 220
Query: 287 TMATMYIKMGQVEKAEESLRRVESR-ITGRDRVPYHYLLSLYGSVGKK-----EEVYRVW 340
+ + + G+VEKA+E + + + I + Y+ LL+ Y VG+K +E+ ++
Sbjct: 221 LVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAY--VGRKDRKGVDEILKLM 278
Query: 341 NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
+ VF T Y +I + GDIE EKIFEE D + + M+SW +
Sbjct: 279 EKEQVVFSVAT---YSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRL 335
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
GN +A A F+ + + PN+ ++ L G
Sbjct: 336 GNMKRAFALFDEMSQRDIVPNAHTYGALIGG 366
>gi|326511196|dbj|BAJ87612.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 725
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 161/381 (42%), Gaps = 12/381 (3%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQL---DLIAKVHGVASAEDFFLSLPDTLKDRRVY 179
K + + + MN +G ++ L S + I++ + + K + +E +P + +Y
Sbjct: 325 KDSWKFFQRMNRKGVKWSLGVSASLIKIFCDEGMKKEALIFQSEMGKRGIPS---NTSIY 381
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
++N Y + AE L +M++KG + YN++M Y + + + VES++ EM +
Sbjct: 382 NTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHD 441
Query: 240 KGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G + + SYN +S+ G Q +EK E F MK + ++++++ Y GQ
Sbjct: 442 LGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMK-KGGIKATSSSYTSLICAYAVSGQY 500
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
EKA + ++ Y LL ++ G E++ W G T + +H +
Sbjct: 501 EKAHIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMV 560
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ LA+ G + E+ + N++M+ Y K G K +
Sbjct: 561 LDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLEL 620
Query: 419 KPNSTSWETLAEGHIRERRILEALSCLKGAF---AAEGAKSWRPKPVNVINFFKACEEES 475
KP+S ++ TL + R R A K AKS+R K +N ++ A E
Sbjct: 621 KPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYR-KLLNTLDVKSARENIK 679
Query: 476 DMGSKEAFVALLRQPGYRKEK 496
D + V +RKEK
Sbjct: 680 DKSAIAGVVKGKSSLKHRKEK 700
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 131/315 (41%), Gaps = 40/315 (12%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD 175
L K ++ A +V+ M NRG + + + +++ K H A AE F S+ L
Sbjct: 181 LNKSGSWQLAEDVFREMQNRG--VPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCP 238
Query: 176 RRV--YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
+ Y AL+NA+ R AE + +++ G+ YN ++ Y + + +
Sbjct: 239 PSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEV 298
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
M E G++ D SYNI + + G G + +++ MK P + + + ++
Sbjct: 299 FETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMK-KVGFKPTMKSHILLLSAFV 357
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G+V AE +RR+ES D ++ LL YG+ G+
Sbjct: 358 KAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGR--------------------- 396
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
++ ME ++E D N +++ Y + G ++AE FNS+
Sbjct: 397 --------------MDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSL 442
Query: 414 IEEGGKPNSTSWETL 428
+G P+ SW +L
Sbjct: 443 ESKGFTPDVMSWTSL 457
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 151/370 (40%), Gaps = 44/370 (11%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWE-LCRVVKELRKFRRYKHALEVYDWMN 133
A+ R + +PQ V + + R + WE L V E R+ R+++ A+ +Y+W+
Sbjct: 37 ALTRSILTQKSPQ----DVWDALDALPRCVGSWEDLMETVAEFRRQRKWRSAIVIYEWIL 92
Query: 134 NRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRG 193
+G F+ PD + L++AY R +
Sbjct: 93 -QGSMFK-----------------------------PDV----GCFNMLMDAYGRTKQWT 118
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE M+ +NV+M Y + + + E ++ EMKE + +YN +L
Sbjct: 119 EAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYL 178
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
GS + E VF M+ ++ V P TF+ M +Y K KAE + + +
Sbjct: 179 EVLNKSGSWQLAEDVFREMQ-NRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALC 237
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV--FPGVTNLGYHAMISSLARIGDIEGM 371
Y L++ + G ++ +SV P + Y+A++ + +R G G
Sbjct: 238 PPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYT--YNALLEAYSRGGHPAGA 295
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+++FE L D N+++ + + G A+A ++S+ + G KP S L
Sbjct: 296 KEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSA 355
Query: 432 HIRERRILEA 441
++ R+ +A
Sbjct: 356 FVKAGRVTDA 365
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 1/264 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ALLN + A L+ K+ D G + Y ++ K K E + EM
Sbjct: 71 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEM 130
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+G+ LD Y + G + V++ M V P+ T STM K G+
Sbjct: 131 ASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV-PDVVTLSTMIDGLCKAGR 189
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ A + +E+R + V Y L+ K + + + F + Y+
Sbjct: 190 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 249
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I L + GD+ F+E L D N+++S + K GN D A F+ +
Sbjct: 250 LIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR 309
Query: 418 GKPNSTSWETLAEGHIRERRILEA 441
PN ++ TL G + R++ +A
Sbjct: 310 CSPNVVTYGTLISGLCKRRQLTKA 333
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 142/351 (40%), Gaps = 50/351 (14%)
Query: 98 EKGGRSLTKWELC--RVVKELRKFRRYKHALEVYDWMNNRG---ERFRLSASDAAIQLDL 152
E R L +C +++ L + + A VY M ++G + LS +D
Sbjct: 129 EMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST-----MIDG 183
Query: 153 IAKVHGVASAEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ K + +A F S+ + VY AL++ +AR A ++ +M+
Sbjct: 184 LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 243
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
++ YN+++ K + + EM E G + DVY+YNI +S G+T+ GVF+
Sbjct: 244 TITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFD 303
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M + +PN T+ T+ + K Q+ KA + ++ R D
Sbjct: 304 DMSSSRC-SPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPD-------------- 348
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
+ Y +++ L + G +EG +F+E + + +
Sbjct: 349 ---------------------SFVYSSLVDGLCKSGKLEGGCMLFDE-MERSGVANSQTR 386
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++ K D+A + FN+I +E G P+ ++ ++ I+ ++ E
Sbjct: 387 TRLIFHLCKANRVDEAVSLFNAIRKE-GMPHPYAYNSIISALIKSGKVNEG 436
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 20/248 (8%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI---WLSSCGSQGSTEKMEGVFE 270
+++++ +K + S+ E G +D+++Y WL+ +K++
Sbjct: 2 FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAK------NKKIQEAVA 55
Query: 271 LMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
LM+ P T++ + KMG++E+A + LR++ D V Y SL
Sbjct: 56 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT---SLID 112
Query: 329 SVGKKEEVYRVWNLYRSVFP---GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+GKK+ + + L++ + + + Y A+I L + G I +++ S
Sbjct: 113 GLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP 172
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI---LEAL 442
D + M+ K G A F S+ G PN + L G + R++ LE L
Sbjct: 173 DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 232
Query: 443 SCLKGAFA 450
+ +K AF
Sbjct: 233 AQMKKAFC 240
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/331 (17%), Positives = 136/331 (41%), Gaps = 9/331 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+V L K ++ + A+ + + + G ++ +A L+ + K+ + A D + D
Sbjct: 40 IVDWLAKNKKIQEAVALMEKITANGCTPTIATYNAL--LNGLCKMGRLEEAIDLLRKIVD 97
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D Y +L++ + + A L +M +G A+ ++ Y ++ ++ + +
Sbjct: 98 NGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQ 157
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
S+ M +G DV + + + G +F+ M+ + + PN +S +
Sbjct: 158 ASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA-RGLAPNEVVYSALI 216
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVF 347
K +++ A E L +++ D + Y+ L+ G ++ L
Sbjct: 217 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCK 276
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P V Y+ +IS + G+ + +F++ S + S + ++S K KA
Sbjct: 277 PDVYT--YNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKAS 334
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
++ + E G P+S + +L +G + ++
Sbjct: 335 LYYQHMKERGCPPDSFVYSSLVDGLCKSGKL 365
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 9/272 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N LI++M +G +S+ YNVM+ ++K + DEV+ V
Sbjct: 336 DVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTV 395
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--DKAVNPNWTTFSTMATMY 292
+M+E G D+ +YN +S G KM+ F LM K + + T +TM
Sbjct: 396 RKMEESGCLPDIVTYNTLISWHCKVG---KMDEAFRLMDEMGRKGLKMDDVTLNTMLRAL 452
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGV 350
+ ++++A + L R D V Y L+ Y K + R+W+ + + P +
Sbjct: 453 CRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSI 512
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y++MI+ L ++G +E L D N ++ Y +EG +KA F
Sbjct: 513 --ITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFH 570
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
N ++E+ KP+ + TL G +E + +AL
Sbjct: 571 NKMVEKNFKPDVVTCNTLLCGLCKEGMLEKAL 602
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 115/256 (44%), Gaps = 1/256 (0%)
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
G A ++ KMRD G ++ YN ++ K +E ++ +MK KG+ + ++NI
Sbjct: 214 GEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNIL 273
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+ C G ++ V ELM + V W T++ M + + K G++ +A +E+
Sbjct: 274 VVGCCRLGWLKEAANVIELMSQNSVVPDAW-TYNVMISGFCKQGRIAEAMRLREEMENLK 332
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
D V Y+ L++ G EE +++ ++ Y+ M+ + G ++ ++
Sbjct: 333 LSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVD 392
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
K + D N ++SW+ K G D+A + + +G K + + T+
Sbjct: 393 KTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRAL 452
Query: 433 IRERRILEALSCLKGA 448
RER++ EA L A
Sbjct: 453 CRERKLDEAHDLLCSA 468
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
LD + K + A D L + + +R + L+ R A +I+ M
Sbjct: 239 LDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSV 298
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ YNVM++ + K E + EM+ + DV +YN ++ C GS+E+
Sbjct: 299 VPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFK 358
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ E M+ + + PN T++ M ++K G++++ ++++R++E D V Y+ L+S +
Sbjct: 359 LIEEME-GRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWH 417
Query: 328 GSVGKKEEVYRVWN 341
VGK +E +R+ +
Sbjct: 418 CKVGKMDEAFRLMD 431
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 3/248 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +L A R R A L+ R +GY V + Y ++ Y K ++ + +
Sbjct: 441 DDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLW 500
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGST-EKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
EMKEK I + +YN ++ G T + ++ + EL+ + + P+ T++T+ Y
Sbjct: 501 DEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELL--ESGLVPDEITYNTIIHGYC 558
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+ GQVEKA + ++ + D V + LL G E+ +++N + S V +
Sbjct: 559 QEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAV 618
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ +I SL + + EE K D N ++ G AE F + I
Sbjct: 619 SYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKI 678
Query: 414 IEEGGKPN 421
E+G N
Sbjct: 679 AEKGKSEN 686
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 116/271 (42%), Gaps = 5/271 (1%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y L++ + + A L+D+M KG + + N M+ + ++ DE
Sbjct: 404 LPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHD 463
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
++ + +G +D SY + + +++ MK +K + P+ T+++M
Sbjct: 464 LLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMK-EKEIIPSIITYNSMIAGL 522
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGV 350
+MG+ +A + L + D + Y+ ++ Y G+ E+ ++ N + ++ P V
Sbjct: 523 CQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDV 582
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ ++ L + G +E K+F W+S D N ++ KE F +A
Sbjct: 583 VTC--NTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLL 640
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ E+ P+ ++ + G R+ +A
Sbjct: 641 EEMEEKKLGPDCYTYNAILGGLTDAGRMKDA 671
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 122/271 (45%), Gaps = 7/271 (2%)
Query: 175 DRRVYGALLNAYVR-ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
D Y +L+ + R+ +LL+D M++KG + +N+++ ++ E ++
Sbjct: 231 DNITYNTILDGLCKKGRLNEARDLLLD-MKNKGLFPNRTTFNILVVGCCRLGWLKEAANV 289
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ M + + D ++YN+ +S QG + + E M+ + ++P+ T++T+
Sbjct: 290 IELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEME-NLKLSPDVVTYNTLINGCF 348
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR-VWNLYRS-VFPGVT 351
+ G E+ + + +E R + V Y+ ++ + GK +EV + V + S P +
Sbjct: 349 EHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIV 408
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y+ +IS ++G ++ ++ +E D N M+ +E D+A
Sbjct: 409 T--YNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLC 466
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
S G + S+ TL G+ + + +AL
Sbjct: 467 SARRRGYFVDEVSYGTLIIGYFKHEKASQAL 497
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 150/351 (42%), Gaps = 9/351 (2%)
Query: 87 QLGSASVLNDWEKGGRSLTKWE-LCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
Q + ++ N + R W+ VV ++ + ++ +W+ +G FR
Sbjct: 48 QEDATAIWNALDNLPRGHDTWDNFMSVVVHFWNYKDWPRVTQMCEWVL-QGTTFRPDLGC 106
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTL--KDRRVYGALLNAYVRARMRGNAELLIDKMR 203
+ +D K + AE F + + L + +G L+N Y A AE L +M+
Sbjct: 107 YNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQ 166
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
+GY+ L N + + KEY E++ ++++ ++ +YN + G G
Sbjct: 167 KRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPS 226
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
K E ++ M+ PN TF+ + + + G +AE +++ D Y+ L
Sbjct: 227 KAEMLYRSMR-RAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNAL 285
Query: 324 LSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+ Y G ++ + FP + ++ +I++ R G E EKIF+ S
Sbjct: 286 MEAYSQGGSPAGALEIFQTMQRNGCFPDT--VSHNILINAYGRAGLYEDAEKIFKSMQSA 343
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
S + + L++S Y + G ++AE +++ +G KP++ + +L +
Sbjct: 344 GFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAY 394
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 8/256 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ AL+NA+ R + AE DK+++ Y YN +M Y + + M
Sbjct: 246 TFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G D S+NI +++ G G E E +F+ M+ +PN + + + Y + G+
Sbjct: 306 QRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQ-SAGFSPNLKSNMLLLSAYARAGR 364
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV-----YRVWNLYRSVFPGVTN 352
VE+AEE + +E T D + Y+ L++ YG G+ E++ V + + P +
Sbjct: 365 VEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGT 424
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I A+ G I E++F+ +K D +M Y K+ + K +
Sbjct: 425 --YNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKK 482
Query: 413 IIEEGGKPNSTSWETL 428
++E G + ++ + L
Sbjct: 483 MLESGCRADAVTARVL 498
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
T D Y L+ Y +A AE L + + + +M Y K K Y +
Sbjct: 418 TKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCT 477
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
S++ +M E G R D + + S+C S E++E V +LM+
Sbjct: 478 SILKKMLESGCRADAVTARVLFSAC---RSPEQVEQVTQLME 516
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 146/337 (43%), Gaps = 11/337 (3%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP 170
R++ + K ++Y + +++ M G L + I L+ + ++ A F +
Sbjct: 86 RLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN--ILLNCFCRCSQLSLALSFLGKMI 143
Query: 171 DTLKDRRV--YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+ + +G+LLN + R +A + D+M GY + + YN ++ K K+ D
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+++ M++ GI DV +YN +S S G + M + + P+ TF+ +
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM-TKREIYPDVFTFNAL 262
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL---LSLYGSVGKKEEVYRVWNLYRS 345
+K G+V +AEE + R D V Y L L +Y + + EE++ + + +
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG-FMVSKG 321
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
FP V Y +I+ + +E K+F E + +++ Y + G +
Sbjct: 322 CFPDVVT--YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
AE F ++ G PN ++ L G +I +AL
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 120/320 (37%), Gaps = 83/320 (25%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++ +++ NA L+++M G + YN +++ + + MVS M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM------------------------- 272
++ I DV+++N + +C +G + E +E M
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 273 ---------KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
V K P+ T+S + Y K +VE + + R R+ V Y L
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 324 LSLYGSVGK---KEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIE--------- 369
+ Y GK EE++R R VF GV + Y+ ++ L G IE
Sbjct: 368 IQGYCRAGKLNVAEEIFR-----RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 370 -----------------GMEK---IFEEWLSVKSSYD-----PRI---ANLMMSWYVKEG 401
GM K + + W + S + P I +M+ Y K+G
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAW-DIYCSLNCQGLMPDIWTYTTMMLGLY-KKG 480
Query: 402 NFDKAEAFFNSIIEEGGKPN 421
+A+A F + E+G PN
Sbjct: 481 LRREADALFRKMKEDGILPN 500
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 150 LDLIAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
+D K V+ AE+F+ + PD + Y L+ AE + M
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIV----TYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
KG + Y++++ Y K K+ + + EM ++G+ + +Y I + G
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
E +F M V V+PN T++ + G++EKA L ++ D V Y+ +
Sbjct: 379 VAEEIFRRM-VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 324 LSLYGSVGKKEEVYRVWNLYRSV 346
+ + K EV W++Y S+
Sbjct: 438 IR---GMCKAGEVADAWDIYCSL 457
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 174/411 (42%), Gaps = 26/411 (6%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEK---GGRSLTKWELCRVVKELRKFRRYKHALEVYDW 131
A + KL L N ++ V D ++ G + L E F R AL+
Sbjct: 643 ASYGKLKLWQNAEI----VFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALD---- 694
Query: 132 MNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRA 189
N + +A+ A L+ + +F+ LP+ + R + + +A+ R
Sbjct: 695 -NMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRN 753
Query: 190 RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSY 249
A + +MR+ G++ + ++ LY + + E +V ++K+ G+ LD+ Y
Sbjct: 754 GNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIY 813
Query: 250 NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
N +S GS K VF+ M+ + +P+ TTF+T+ +Y + V++A+ LR +
Sbjct: 814 NHMISLYSKLGSYRKAALVFKGMQ-EIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMI 872
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
+ Y L+S YG + E+ V+ Y+ MI+ + G+
Sbjct: 873 KTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHR 932
Query: 370 GMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
+E++ E+ + ++P + +++M Y K G KAE ++ E G P++ + +
Sbjct: 933 KIEEVIEQMKA--DGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTS 990
Query: 428 LAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA---CEEES 475
+ H+ + L A+ L+ A RP V + F A CE S
Sbjct: 991 IINSHLNNKDYLSAVIWLRKMTDA----CVRPTHVTITCFVGAASVCERSS 1037
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 151/327 (46%), Gaps = 5/327 (1%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
L +LC VVK + ++ ALE+Y+ +N + + A+ L ++ + + A+
Sbjct: 43 LAPTDLCYVVKRVAN-TSWQRALELYECLN-VARWYAPNPRMLAVMLSVLGRANQPGLAQ 100
Query: 164 DFFLSLPDTLKD-RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
+ F ++ + +VY +L++ Y R + + L+ +M+D+G + +N+++
Sbjct: 101 ELFDRAESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKART 160
Query: 223 KIKEYDEV-ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
+ + + S++ ++ G+R D +YN +S+C +FE M+ + +P+
Sbjct: 161 RGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQ-RQGCDPD 219
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
T++ M ++Y + G+VE A R ++ + D V Y+ +L + G+ EEV R+
Sbjct: 220 IWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRG 279
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ R + Y+ MI + G E+++ + D +++ K G
Sbjct: 280 MMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAG 339
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETL 428
++A A F +++ +P ++ +
Sbjct: 340 FVNEAAAMFEDMLKSQVRPTLQAFSAM 366
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 118/266 (44%), Gaps = 9/266 (3%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+KD ++ A++ +Y + ++ NAE++ ++ G+A ++ Y+ +++ Y + ++
Sbjct: 632 VKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATR 691
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ M G++ + N L + G G +++ ++ + + + PN TF + +
Sbjct: 692 ALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLP-EMGITPNSRTFVVIFHAF 750
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV-YRVWNLYRSVFPGVT 351
+ G +E+A R++ + LL+LY +E V L + +
Sbjct: 751 SRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYS----RETVEIDAEELVKDIKKAGL 806
Query: 352 NLG---YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
L Y+ MIS +++G +F+ + S D N ++ Y + +A+A
Sbjct: 807 ELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQA 866
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIR 434
+I+ G PN +++ TL + R
Sbjct: 867 LLREMIKTGNAPNISTYTTLISAYGR 892
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 150/318 (47%), Gaps = 42/318 (13%)
Query: 154 AKVHGVASAEDF---FLSLPDTLKDRRV-----YGALLNAYVRARMRGNAELLIDKMRDK 205
A + G + A+DF F L + +K+ + Y +++ +A +A L+D+MRDK
Sbjct: 50 ALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDK 109
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G + + YNV++ + ++ DE + M+ EM +G DV +YN ++
Sbjct: 110 GCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFI------------ 157
Query: 266 EGVFELMKVDKA--------VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+G+ + +VD+A V P+ +++T+ K G ++ A L ++ +R D
Sbjct: 158 KGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDV 217
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-----PGVTNLGYHAMISSLARIGDIEGME 372
V Y SL K EV R L S+ P + + Y++++ +L R+G I E
Sbjct: 218 VTYS---SLIDGFCKGGEVERAMGLLDSMLKLGCRPNM--VAYNSLLGALHRLGHIGKAE 272
Query: 373 KIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+ E + + P + N + K KA+A F+ ++E G PN++S+ L E
Sbjct: 273 DMLVEM--ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVE 330
Query: 431 GHIRERRILEALSCLKGA 448
+++ + +A++ ++ A
Sbjct: 331 ELCKKKELDDAITLVEQA 348
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 117/264 (44%), Gaps = 9/264 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + LL R+ A L+ +M++ G YN +++ Y K K++ + +
Sbjct: 9 DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL 68
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM + V +Y + G T+ + + M+ DK +PN T++ + +
Sbjct: 69 AEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMR-DKGCSPNIYTYNVIVEGLCE 127
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++++A++ L + R D V Y+ + + +E R + V P V +
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA-RKFLARMPVTPDVVS-- 184
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +I+ L + GD++ ++ ++ + + D + ++ + K G ++A +S++
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244
Query: 415 EEGGKPNSTSWETLAE-----GHI 433
+ G +PN ++ +L GHI
Sbjct: 245 KLGCRPNMVAYNSLLGALHRLGHI 268
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 138/345 (40%), Gaps = 57/345 (16%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PDTLKDR 176
+ A+ + D M G R + A ++ L + ++ + AED + + PD +
Sbjct: 234 ERAMGLLDSMLKLGCRPNMVAYNSL--LGALHRLGHIGKAEDMLVEMERRGFTPDVVS-- 289
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y A ++ +A A+ + D+M ++G ++ Y++++ K KE D+ ++V +
Sbjct: 290 --YNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQ 347
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+EK +D+ Y + L G ++ +F + +K P+ ++ M + K
Sbjct: 348 AREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 407
Query: 297 QVEKA----EESLRR----------------VESRITGR--------------DRVPYHY 322
Q++KA ++ L R V+ R++ D V Y
Sbjct: 408 QIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 467
Query: 323 LLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
L+ GK ++ + P V Y A+I+ L E + EE
Sbjct: 468 LVDAMCKCGKSAAALELFEEAVKGGCVPDVVT--YSALITGLVH-------ENMAEEAYL 518
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
+ + D + N M+ Y + G+ D F +IE +PN+ ++
Sbjct: 519 LFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTF 563
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 71/170 (41%), Gaps = 4/170 (2%)
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+DK+ P+ TF+ + + Q+EKA + L R++ D Y+ L+S Y
Sbjct: 2 IDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDF 61
Query: 334 EEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
+ ++ + P V Y ++ L + G + K+ +E S + N
Sbjct: 62 GQAFKFLAEMVKNHCLPTVVT--YTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYN 119
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+++ +E D+A+ + G P+ ++ + +G + R+ EA
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA 169
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 135/298 (45%), Gaps = 38/298 (12%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
AL++ A + A L+ +M ++G + S+ YN ++ K + +E + EM +
Sbjct: 447 ALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRR 506
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
GI+ D+Y+YN+ L + G E+ G++ K + P+ T+ M Y K +VE+
Sbjct: 507 GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNF-PDAYTYGIMIDGYCKANRVEE 565
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN------------LYRSVFP 348
E+ + + + ++ V Y L+ Y G E +R+ + Y S+
Sbjct: 566 GEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIH 625
Query: 349 GVTNLG-----------------------YHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G++N+G Y A+I ++G + ++ I +E +S+ + +
Sbjct: 626 GLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQE-MSINNVH 684
Query: 386 DPRIA-NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+I +M++ + K GN A N + ++G P++ ++ L G +E ++ EAL
Sbjct: 685 PNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEAL 742
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 5/216 (2%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLK---DRRVYGALLNAYVRARMRGNAELLIDKMR 203
I +D K + V E F + T+K + VYG L+ AY A L D MR
Sbjct: 551 GIMIDGYCKANRVEEGEKLFQEMV-TMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMR 609
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
+G S Y+ ++ I D ++ EM+++G+ +V Y + G
Sbjct: 610 SRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMH 669
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
K++ + + M ++ V+PN T++ M + K+G ++ A + L + + D V Y+ L
Sbjct: 670 KVDSILQEMSINN-VHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNAL 728
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
+ + GK EE +V +L + + ++ Y +I
Sbjct: 729 TNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 13/270 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG L+N V+ A ++ +M D+GYA +++ YN ++ Y +I + +M
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDM 328
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
GI + + N + E E + E M V T S + + +K
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKC-- 386
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSV----GKKEEVYRVWNLYRSVFPG--VT 351
+ + +L + + R+ P LL+L S GK+ E +W YR + G
Sbjct: 387 --RFDSALLFIMEMLL-RNFKPNDGLLTLLVSGLCQNGKQSEAIELW--YRLLEKGFAAN 441
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ +A+I L G E K+ +E L D N ++ KEG ++
Sbjct: 442 TVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKE 501
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++ G +P+ ++ L G +I EA
Sbjct: 502 EMVRRGIQPDMYTYNMLLHGLCNMGKIEEA 531
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+ V + S + KG+ + + N LSS + VF++M V P+ FS
Sbjct: 143 FGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIM-CHCGVTPDVYLFS 201
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS- 345
TM + G+V+ A E R++E + V Y+ ++ G+ +E ++
Sbjct: 202 TMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKE 261
Query: 346 -VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
V P + Y +I+ L ++ + I +E + + + N ++ Y + GN
Sbjct: 262 RVKPSLVT--YGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNIS 319
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A + +I G PNS + +L +G+ + ++ A
Sbjct: 320 TALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHA 356
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 49/267 (18%), Positives = 112/267 (41%), Gaps = 7/267 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L++ Y R A + D M G + +S+ N ++ Y K + + E ++ EM
Sbjct: 304 VYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEM 363
Query: 238 KEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
G ++ ++ + C + + E++ + PN + + + + G
Sbjct: 364 LTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLL--RNFKPNDGLLTLLVSGLCQNG 421
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
+ +A E R+ + + V + L+ G KEE ++ L R + + ++
Sbjct: 422 KQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLV--LDSIS 479
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +I + + G +E K+ EE + D N+++ G ++A ++
Sbjct: 480 YNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK 539
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
+ G P++ ++ + +G+ + R+ E
Sbjct: 540 KNGNFPDAYTYGIMIDGYCKANRVEEG 566
>gi|145335386|ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g10910, chloroplastic; Flags: Precursor
gi|110741600|dbj|BAE98748.1| membrane-associated salt-inducible protein isolog [Arabidopsis
thaliana]
gi|332190541|gb|AEE28662.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 664
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 163/386 (42%), Gaps = 45/386 (11%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S+ L+ ++ L +L ++++ R++ +++++WM G + +S + I+
Sbjct: 82 SSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIK 140
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVY--GALLNAYVRARMRGNAELLIDKMRDKGY 207
V+ A + + S+PD VY ++L+ V+ + L D+M+ G
Sbjct: 141 F---VGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGL 197
Query: 208 AVHSLPYNVMMTLYMKIKE-YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
+ YN ++ +K+K Y + ++ E+ GI++D Y L+ C S G +E+ E
Sbjct: 198 KPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAE 257
Query: 267 GVFELMKVD--------------------------------KAVN--PNWTTFSTMATMY 292
+ MKV+ K++ PN +T+ +Y
Sbjct: 258 NFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY 317
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
IK G +++ E L +ES + +PY L+ GK EE +++ + GV +
Sbjct: 318 IKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKG--KGVRS 375
Query: 353 LGY--HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
GY MIS+L R + +++ + + D + N M+ Y + G +
Sbjct: 376 DGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMM 435
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRER 436
+ E+ P+ ++ L + I+E+
Sbjct: 436 KKMDEQAVSPDYNTFHILIKYFIKEK 461
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 86/198 (43%), Gaps = 34/198 (17%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
LL Y++ + + L+ ++ GYA + +PY ++M K + +E S+ +MK K
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 241 GIRLDVYSYNIWLSS-CGSQGSTE-------------------------------KMEGV 268
G+R D Y+ +I +S+ C S+ E +ME V
Sbjct: 372 GVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESV 431
Query: 269 FELMKV--DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
+MK ++AV+P++ TF + +IK A ++ + S+ + L+
Sbjct: 432 MRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYH 491
Query: 327 YGSVGKKEEVYRVWNLYR 344
G + + E + V+N+ R
Sbjct: 492 LGKIRAQAEAFSVYNMLR 509
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+ ++ +++VY N LS G + +F+ MK D + P+ T++T+ IK+
Sbjct: 157 IPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRD-GLKPDVVTYNTLLAGCIKVK 215
Query: 297 Q-VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
KA E + + D V Y +L++ S G+ EE + Y
Sbjct: 216 NGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHY 275
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
++++S + GD + +++ E S+ + + ++ Y+K G FD++ + +
Sbjct: 276 SSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELES 335
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
G N + L +G + ++ EA S
Sbjct: 336 AGYAENEMPYCMLMDGLSKAGKLEEARS 363
>gi|1931651|gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
[Arabidopsis thaliana]
Length = 652
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 163/386 (42%), Gaps = 45/386 (11%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S+ L+ ++ L +L ++++ R++ +++++WM G + +S + I+
Sbjct: 82 SSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIK 140
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVY--GALLNAYVRARMRGNAELLIDKMRDKGY 207
V+ A + + S+PD VY ++L+ V+ + L D+M+ G
Sbjct: 141 F---VGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGL 197
Query: 208 AVHSLPYNVMMTLYMKIKE-YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
+ YN ++ +K+K Y + ++ E+ GI++D Y L+ C S G +E+ E
Sbjct: 198 KPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAE 257
Query: 267 GVFELMKVD--------------------------------KAVN--PNWTTFSTMATMY 292
+ MKV+ K++ PN +T+ +Y
Sbjct: 258 NFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY 317
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
IK G +++ E L +ES + +PY L+ GK EE +++ + GV +
Sbjct: 318 IKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKG--KGVRS 375
Query: 353 LGY--HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
GY MIS+L R + +++ + + D + N M+ Y + G +
Sbjct: 376 DGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMM 435
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRER 436
+ E+ P+ ++ L + I+E+
Sbjct: 436 KKMDEQAVSPDYNTFHILIKYFIKEK 461
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+ ++ +++VY N LS G + +F+ MK D + P+ T++T+ IK+
Sbjct: 157 IPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRD-GLKPDVVTYNTLLAGCIKVK 215
Query: 297 Q-VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
KA E + + D V Y +L++ S G+ EE + Y
Sbjct: 216 NGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHY 275
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
++++S + GD + +++ E S+ + + ++ Y+K G FD++ + +
Sbjct: 276 SSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELES 335
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
G N + L +G + ++ EA S
Sbjct: 336 AGYAENEMPYCMLMDGLSKAGKLEEARS 363
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 161/376 (42%), Gaps = 43/376 (11%)
Query: 87 QLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
+L + ++D G R+ + E+ VV+ + + ++ AL+ ++W+ R AS A
Sbjct: 137 ELPPGAPVDDVLDGARA-SPDEVAFVVRAVGE-SSWRRALDAFEWL----ARSSAPASRA 190
Query: 147 -AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A+ L ++ + + AE+ FL +V+ A++ Y R+ +A L+D M D+
Sbjct: 191 VAVVLGVLGRARQDSIAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDR 250
Query: 206 GYAVHSLPYNVMMTLYMK--IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
G + +N ++ K ++ E+++ G+R DV +YN +S+C + E
Sbjct: 251 GIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLE 310
Query: 264 KMEGVFELM----------------------------------KVDKAVNPNWTTFSTMA 289
VFE M V+K P+ T++++
Sbjct: 311 DAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLL 370
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+ K G V+K E + ++ ++ + Y+ ++ +YG +G+ + +++ R++
Sbjct: 371 YAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCT 430
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y MI SL ++ I K+ E+ + ++ Y K G AE
Sbjct: 431 PDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENT 490
Query: 410 FNSIIEEGGKPNSTSW 425
F+ +I G KP+ ++
Sbjct: 491 FDCMIASGVKPDRLAY 506
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 122/322 (37%), Gaps = 51/322 (15%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R +L RAR AE + + +G V +N MM +Y + +D+ ++
Sbjct: 189 RAVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQV--FNAMMGVYARSGRFDDARQLLDT 246
Query: 237 MKEKGIRLDVYSYNIWL---SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
M ++GI D+ S+N + S G + ++ +FE+ + + P+ T++T+ +
Sbjct: 247 MHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQ--SGLRPDVITYNTLIS--- 301
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
Q E+++ E I R +W
Sbjct: 302 ACSQSSNLEDAVTVFEDMIASECRPD-------------------LWT------------ 330
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+AM+S R G E E++F E + D N ++ + KEGN DK E +
Sbjct: 331 -YNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQL 389
Query: 414 IEEGGKPNSTSWETLAEGHIRERRI---------LEALSCLKGAFAAEGAKSWRPKPVNV 464
++ G K N ++ T+ + + R+ + A+ C A K +
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRI 449
Query: 465 INFFKACEEESDMGSKEAFVAL 486
K E+ +D G K +A
Sbjct: 450 AEAGKVLEDMTDAGLKPTLIAF 471
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 117/274 (42%), Gaps = 9/274 (3%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT-LYMKIKEYDEVESMV 234
+ +Y ++++ Y + A L+D G ++ L V++ Y KIK + + E +V
Sbjct: 710 KSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILV 769
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+++ +D +N + + G EK VF+ M + P + + M I
Sbjct: 770 KGLRQAS-GIDRRIWNALIHAYAESGLYEKARAVFDNM-IKTGPLPTVDSVNGMMRALIV 827
Query: 295 MGQVEK---AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
G++++ E L+ + +I+ + LL + G EV +++N ++
Sbjct: 828 DGRLDELYVVVEELQDMNFKIS---KSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPN 884
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y +MIS L +E + E D I N +++ Y GNFD+ +
Sbjct: 885 MHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYR 944
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
SI+E G +P+ ++ TL + R R E + L
Sbjct: 945 SILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLL 978
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 99/230 (43%), Gaps = 1/230 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A+++ + R AE L ++ +KG+ ++ YN ++ + K D+VE ++
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQL 389
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G + + +YN + G G + G+++ M+ P+ T++ M KM +
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRA-MGCTPDAVTYTVMIDSLGKMNR 448
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ +A + L + + + L+ Y G++ + ++ + L Y
Sbjct: 449 IAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLV 508
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
M+ AR GD E M ++ + ++ D + +++ KE ++ E
Sbjct: 509 MLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIE 558
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +LL A +A +R A+ + ++MR K Y ++ Y++MM +Y + + E++++ MK
Sbjct: 993 YKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK 1052
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
E GI + + +I ++S G+ G + E V +K ++ + +ST+ Y+K G
Sbjct: 1053 EDGIEPTIATMHILMTSYGTAGQPREAENVLNNLK-SSSLEVSTLPYSTVFDAYLKNG 1109
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 114/301 (37%), Gaps = 56/301 (18%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DRR++ AL++AY + + A + D M G N MM + DE+ +V
Sbjct: 779 DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVV 838
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV-------------------- 274
E+++ ++ + + L + G VFE+MK+
Sbjct: 839 EELQDMNFKISKSTVLLLLDAFAKAGD------VFEVMKIYNGMKAAGYLPNMHLYRSMI 892
Query: 275 --------------------DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
P+ + + MY G ++ + R +
Sbjct: 893 SLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLE 952
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGME 372
D Y+ L+ +Y + EE + + N R + P + + Y +++++ A+ E +
Sbjct: 953 PDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQS--YKSLLAASAKAELREQAD 1010
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+IFEE S + I ++MM Y GN KAE + E+G +P T+A H
Sbjct: 1011 QIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEP------TIATMH 1064
Query: 433 I 433
I
Sbjct: 1065 I 1065
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 2/203 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + ALLN Y A + + + G YN ++ +Y + +E +++
Sbjct: 919 DLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLL 978
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM ++G+ + SY L++ E+ + +FE M+ K+ N + + M +Y
Sbjct: 979 NEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMR-SKSYQLNRSIYHMMMKIYRN 1037
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G KAE L ++ H L++ YG+ G+ E V N +S V+ L
Sbjct: 1038 AGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLP 1097
Query: 355 YHAMISSLARIGDI-EGMEKIFE 376
Y + + + GD G K+ E
Sbjct: 1098 YSTVFDAYLKNGDYNHGTTKLLE 1120
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT-LKDR 176
K R A+ +YD M G A + +D + K++ +A A + D LK
Sbjct: 410 KMGRLDLAVGLYDEMRAMG--CTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPT 467
Query: 177 RV-YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ + AL+ AY + R +AE D M G L Y VM+ ++ + + +++ +
Sbjct: 468 LIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYR 527
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+M R D Y + L + + E++E V + M++ +N ++TM IK
Sbjct: 528 KMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMN-----LGIISTMLIKA 582
Query: 296 GQVEKAEESLRR 307
V + + L++
Sbjct: 583 RCVSQGAKLLKK 594
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 1/166 (0%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
K+ Y +++ Y + A L D+MR G ++ Y VM+ K+ E +
Sbjct: 396 KNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKV 455
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ +M + G++ + +++ + + G E F+ M + V P+ + M ++
Sbjct: 456 LEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCM-IASGVKPDRLAYLVMLDVFA 514
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
+ G EK R++ + D Y LL K EE+ V
Sbjct: 515 RSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEV 560
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 155/351 (44%), Gaps = 6/351 (1%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K R AL+++ +M +G + + + IQ ASA ++ +
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D + L++ + + A+ ++ M + G + + YN +M Y E E
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEAR 356
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ M +G + DV+SY+I ++ ++ + +F M + + + PN +++T+
Sbjct: 357 KLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEM-IHQGLTPNTVSYTTLIHA 415
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
+ ++G++ +A E + + + D Y LL + G + +R++ + +
Sbjct: 416 FCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPN 475
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y +I S+ + G++ K+F E D +I +++ KEG D+A F
Sbjct: 476 LVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFR 535
Query: 412 SIIEEGGKPNSTSWETLAEG---HIRERRILEALSCL--KGAFAAEGAKSW 457
+ E+G PN S+ + G H E R ++ + + KG A EG +W
Sbjct: 536 KMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGTTAW 586
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 177/416 (42%), Gaps = 22/416 (5%)
Query: 21 QPLPCKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKL 80
+PLPC I F +L SAI RQ + Q+ G N +
Sbjct: 85 KPLPCIIQ--FNKL--LSAIVRMRQYYDAVISLSKQMELAGL----SPNTCTLNILINCF 136
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
LM + LG SVL K G T ++ L K + ALE++D M RG +
Sbjct: 137 CLMQHVDLG-FSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPD 195
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELL 198
+ I + + K+ A+A + + D Y L+++ + R+ A +
Sbjct: 196 VYTYTTII--NGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDI 253
Query: 199 IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGS 258
M+ KG + + Y ++ + E +M++EM I D+ ++++ +
Sbjct: 254 FSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCK 313
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
+G+ + +GV + M + V PN T++++ Y +V +A + + +R D
Sbjct: 314 EGNVLEAQGVLKTM-TEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVF 372
Query: 319 PYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y L++ Y V + +E +++N +++ + P + Y +I + ++G + ++F+
Sbjct: 373 SYSILINGYCMVKRIDEAKQLFNEMIHQGLTP--NTVSYTTLIHAFCQLGKLREARELFK 430
Query: 377 EWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+ + + Y P + ++++ + K+G KA F ++ KPN + L +
Sbjct: 431 DMHT--NGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILID 484
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 126/278 (45%), Gaps = 5/278 (1%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y ++L+ Y + A + KMR G + Y+++M K E
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ M ++G++ ++ +Y L ++G+ +M G+ +LM V ++P+ FS +
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM-VRNGIHPDHYVFSILICA 380
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPG 349
Y K G+V++A ++ + + V Y ++ + G+ E+ +Y + + PG
Sbjct: 381 YAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
N+ Y+++I L E E++ E L + N ++ + KEG ++E
Sbjct: 441 --NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKG 447
F ++ G KPN ++ TL G+ ++ EA+ L G
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 131/299 (43%), Gaps = 37/299 (12%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGA++ ++ +A L ++M D+G + ++ YN ++ +++ E ++ EM
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++GI L+ +N + S +G + E +FELM V V PN T++T+ Y G++
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM-VRIGVKPNVITYNTLINGYCLAGKM 527
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN------------LYRSV 346
++A + L + S + V Y L++ Y + + E+ ++ Y +
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587
Query: 347 FPG----------------VTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVKS 383
G +T G Y+ ++ L + + ++F+ +
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ R N+M+ +K G D+A+ F + G PN ++ +AE +I + +LE L
Sbjct: 648 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE-NIIGQGLLEEL 705
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 117/272 (43%), Gaps = 9/272 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT-LYMKIKEYDEVESM 233
D YG L+ RA + + KG+ V ++ + ++ L + D ++ +
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145
Query: 234 VSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVN--PNWTTFSTMAT 290
+ M E G +V+SYNI L C S E +E + +M D+ P+ +++T+
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALE-LLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFP 348
+ K G +KA + + R D V Y+ +++ ++ V N + V P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ Y++++ G + ++ S D +L+M + K G +A
Sbjct: 265 DC--MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
F+S+ + G KP T++ TL +G+ + ++E
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 19/294 (6%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
S PD + Y ++N + + A +M D+G + YN ++ K +
Sbjct: 192 SPPDVVS----YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
D+ +++ M + G+ D +YN L S G ++ G + M+ D V P+ T+S
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSD-GVEPDVVTYSL 306
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RS 345
+ K G+ +A + + R + Y LL Y + G E++ + +L
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ P + + +I + A+ G ++ +F + + + ++ K G +
Sbjct: 367 IHP--DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 424
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIR-------ERRILEALS---CLKGAF 449
A +F +I+EG P + + +L G E ILE L CL F
Sbjct: 425 AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 478
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 164/350 (46%), Gaps = 12/350 (3%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
+T + C VVK + + ++ ALEV++W+N R + AAI L ++ + + + A
Sbjct: 154 MTPTDYCFVVKSVGQ-ESWQRALEVFEWLNLRHWHSPNARMVAAI-LGVLGRWNQESLAV 211
Query: 164 DFFLSLPDTLKDR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
+ F T+ DR +VY A++ Y R+ A+ L+D MR +G + +N ++ +
Sbjct: 212 EIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARL 271
Query: 223 K---IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
K + VE ++ ++ G+R D +YN LS+C + + VFE M+ +
Sbjct: 272 KSGGLTPNLAVE-LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRC-Q 329
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
P+ T++ M ++Y + G +AE +E + D V Y+ LL + E+V V
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEV 389
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS-SYDPRIANLMMSWYV 398
+ + + G + Y+ +I + G ++ +++++ + + D +++
Sbjct: 390 YQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG 449
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA---LSCL 445
K +A A + +++ G KP ++ L G+ + + EA SC+
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/311 (17%), Positives = 132/311 (42%), Gaps = 3/311 (0%)
Query: 139 FRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAE 196
F++S S + LD A+ + + + S+ L R+Y ++ + + +AE
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 197 LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
+++ +M + + V +N M+ +Y I++Y + + +KE G+ D +YN +
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMY 972
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
E+ + + M+ + ++P T+ ++ + + K +E+AE+ + S+ D
Sbjct: 973 CRDRRPEEGYLLMQQMR-NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
R YH ++ + G + ++ + ++ T H ++ S + G+ + EK+
Sbjct: 1032 RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLS 1091
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ + ++ Y++ +++ + +EG +P+ W +
Sbjct: 1092 NLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSK 1151
Query: 437 RILEALSCLKG 447
+E + LK
Sbjct: 1152 EKIEVMLLLKA 1162
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 96/230 (41%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A+++ Y R + AE L ++ KG+ ++ YN ++ + + + ++V+ +
Sbjct: 331 DLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVY 390
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M++ G D +YN + G QG + +++ MK NP+ T++ + K
Sbjct: 391 QQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGK 450
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+ +A + + Y L+ Y GK+EE ++ NL
Sbjct: 451 ANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLA 510
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
Y M+ L R + ++ + +S + + LM+ +KE D
Sbjct: 511 YSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSD 560
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 164/350 (46%), Gaps = 12/350 (3%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
+T + C VVK + + ++ ALEV++W+N R + AAI L ++ + + + A
Sbjct: 154 MTPTDYCFVVKSVGQ-ESWQRALEVFEWLNLRHWHSPNARMVAAI-LGVLGRWNQESLAV 211
Query: 164 DFFLSLPDTLKDR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
+ F T+ DR +VY A++ Y R+ A+ L+D MR +G + +N ++ +
Sbjct: 212 EIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARL 271
Query: 223 K---IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
K + VE ++ ++ G+R D +YN LS+C + + VFE M+ +
Sbjct: 272 KSGGLTPNLAVE-LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRC-Q 329
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
P+ T++ M ++Y + G +AE +E + D V Y+ LL + E+V V
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEV 389
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS-SYDPRIANLMMSWYV 398
+ + + G + Y+ +I + G ++ +++++ + + D +++
Sbjct: 390 YQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG 449
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA---LSCL 445
K +A A + +++ G KP ++ L G+ + + EA SC+
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/311 (17%), Positives = 132/311 (42%), Gaps = 3/311 (0%)
Query: 139 FRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAE 196
F++S S + LD A+ + + + S+ L R+Y ++ + + +AE
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 197 LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
+++ +M + + V +N M+ +Y I++Y + + +KE G+ D +YN +
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMY 972
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
E+ + + M+ + ++P T+ ++ + + K +E+AE+ + S+ D
Sbjct: 973 CRDRRPEEGYLLMQQMR-NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
R YH ++ + G + ++ + ++ T H ++ S + G+ + EK+
Sbjct: 1032 RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLS 1091
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ + ++ Y++ +++ + +EG +P+ W +
Sbjct: 1092 NLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSK 1151
Query: 437 RILEALSCLKG 447
+E + LK
Sbjct: 1152 EKIEVMLLLKA 1162
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A+++ Y R + AE L ++ KG+ ++ YN ++ + + + ++V+ +
Sbjct: 331 DLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVY 390
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M++ G D +YN + G QG + +++ MK NP+ T++ +
Sbjct: 391 QQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVL------ 444
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++ ++ R VE+ L+S VG K T
Sbjct: 445 ---IDSLGKANRTVEAAA----------LMSEMLDVGIKP----------------TLQT 475
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y A+I A+ G E E F L + D ++M+ ++ KA + +I
Sbjct: 476 YSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMI 535
Query: 415 EEGGKPNSTSWETLAEGHIRERR 437
+G P+ T +E + G ++E R
Sbjct: 536 SDGHTPSYTLYELMILGLMKENR 558
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 149/351 (42%), Gaps = 9/351 (2%)
Query: 87 QLGSASVLNDWEKGGRSLTKWE-LCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
Q + ++ N + R W+ VV ++ + ++ +W+ +G FR
Sbjct: 48 QEDATAIWNALDNLPRGHDTWDNFMSVVVHFWNYKDWPRVTQMCEWVL-QGTAFRPDLGC 106
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTL--KDRRVYGALLNAYVRARMRGNAELLIDKMR 203
+ +D K + AE F + + L + +G L+N Y A AE L +M+
Sbjct: 107 YNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQ 166
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
+GY+ L N + + KEY E++ ++++ ++ +YN + G G
Sbjct: 167 KRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPS 226
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
K E ++ M+ PN TF+ + + + G +AE +++ D Y+ L
Sbjct: 227 KAEMLYRSMR-RAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNAL 285
Query: 324 LSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+ Y G ++ + FP + ++ +I++ R G E EKIF+ S
Sbjct: 286 MEAYSQGGSPAGALEIFQTMQRNGCFP--DTVSHNILINAYGRAGLYEDAEKIFKSMQSA 343
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
S + + L++S Y + G ++AE +++ +G KP++ + L +
Sbjct: 344 GFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAY 394
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 8/256 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ AL+NA+ R + AE DK+++ Y YN +M Y + + M
Sbjct: 246 TFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G D S+NI +++ G G E E +F+ M+ +PN + + + Y + G+
Sbjct: 306 QRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQ-SAGFSPNLKSNMLLLSAYARAGR 364
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR-----VWNLYRSVFPGVTN 352
VE+AEE + +E T D + Y+ L++ YG G+ E++ V + + P +
Sbjct: 365 VEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGT 424
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I A+ G I E++F+ +K D +M Y K+ + K +
Sbjct: 425 --YNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKK 482
Query: 413 IIEEGGKPNSTSWETL 428
++E G + ++ + L
Sbjct: 483 MLESGCRADAVTARVL 498
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
T D Y L+ Y +A AE L + + + +M Y K K Y +
Sbjct: 418 TKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCT 477
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
S++ +M E G R D + + S+C S E++E V +LM+
Sbjct: 478 SILKKMLESGCRADAVTARVLFSAC---RSPEQVEQVTQLME 516
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 161/376 (42%), Gaps = 43/376 (11%)
Query: 87 QLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
+L + ++D G R+ + E+ VV+ + + ++ AL+ ++W+ R AS A
Sbjct: 137 ELPPGAPVDDVLDGARA-SPDEVAFVVRAVGE-SSWRRALDAFEWL----ARSSAPASRA 190
Query: 147 -AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A+ L ++ + + AE+ FL +V+ A++ Y R+ +A L+D M D+
Sbjct: 191 VAVVLGVLGRARQDSIAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDR 250
Query: 206 GYAVHSLPYNVMMTLYMK--IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
G + +N ++ K ++ E+++ G+R DV +YN +S+C + E
Sbjct: 251 GIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLE 310
Query: 264 KMEGVFELM----------------------------------KVDKAVNPNWTTFSTMA 289
VFE M V+K P+ T++++
Sbjct: 311 DAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLL 370
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+ K G V+K E + ++ ++ + Y+ ++ +YG +G+ + +++ R++
Sbjct: 371 YAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCT 430
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y MI SL ++ I K+ E+ + ++ Y K G AE
Sbjct: 431 PDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENT 490
Query: 410 FNSIIEEGGKPNSTSW 425
F+ +I G KP+ ++
Sbjct: 491 FDCMIASGVKPDRLAY 506
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 122/322 (37%), Gaps = 51/322 (15%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R +L RAR AE + + +G V +N MM +Y + +D+ ++
Sbjct: 189 RAVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQV--FNAMMGVYARSGRFDDARQLLDT 246
Query: 237 MKEKGIRLDVYSYNIWL---SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
M ++GI D+ S+N + S G + ++ +FE+ + + P+ T++T+ +
Sbjct: 247 MHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQ--SGLRPDVITYNTLIS--- 301
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
Q E+++ E I R +W
Sbjct: 302 ACSQSSNLEDAVTVFEDMIASECRPD-------------------LWT------------ 330
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+AM+S R G E E++F E + D N ++ + KEGN DK E +
Sbjct: 331 -YNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQL 389
Query: 414 IEEGGKPNSTSWETLAEGHIRERRI---------LEALSCLKGAFAAEGAKSWRPKPVNV 464
++ G K N ++ T+ + + R+ + A+ C A K +
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRI 449
Query: 465 INFFKACEEESDMGSKEAFVAL 486
K E+ +D G K +A
Sbjct: 450 AEAGKVLEDMTDAGLKPTLIAF 471
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 117/274 (42%), Gaps = 9/274 (3%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT-LYMKIKEYDEVESMV 234
+ +Y ++++ Y + A L+D G ++ L V++ Y KIK + + E +V
Sbjct: 710 KSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILV 769
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+++ +D +N + + G EK VF+ M + P + + M I
Sbjct: 770 KGLRQAS-GIDRRIWNALIHAYAESGLYEKARAVFDNM-IKTGPLPTVDSVNGMMRALIV 827
Query: 295 MGQVEK---AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
G++++ E L+ + +I+ + LL + G EV +++N ++
Sbjct: 828 DGRLDELYVVVEELQDMNFKIS---KSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPN 884
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y +MIS L +E + E D I N +++ Y GNFD+ +
Sbjct: 885 MHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYR 944
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
SI+E G +P+ ++ TL + R R E + L
Sbjct: 945 SILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLL 978
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 99/230 (43%), Gaps = 1/230 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A+++ + R AE L ++ +KG+ ++ YN ++ + K D+VE ++
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQL 389
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G + + +YN + G G + G+++ M+ P+ T++ M KM +
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRA-MGCTPDAVTYTVMIDSLGKMNR 448
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ +A + L + + + L+ Y G++ + ++ + L Y
Sbjct: 449 IAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLV 508
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
M+ AR GD E M ++ + ++ D + +++ KE ++ E
Sbjct: 509 MLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIE 558
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +LL A +A +R A+ + ++MR K Y ++ Y++MM +Y + + E++++ MK
Sbjct: 993 YKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK 1052
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
E GI + + +I ++S G+ G + E V +K ++ + +ST+ Y+K G
Sbjct: 1053 EDGIEPTIATMHILMTSYGTAGQPREAENVLNNLK-SSSLEVSTLPYSTVFDAYLKNG 1109
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 114/301 (37%), Gaps = 56/301 (18%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DRR++ AL++AY + + A + D M G N MM + DE+ +V
Sbjct: 779 DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVV 838
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV-------------------- 274
E+++ ++ + + L + G VFE+MK+
Sbjct: 839 EELQDMNFKISKSTVLLLLDAFAKAGD------VFEVMKIYNGMKAAGYLPNMHLYRSMI 892
Query: 275 --------------------DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
P+ + + MY G ++ + R +
Sbjct: 893 SLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLE 952
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGME 372
D Y+ L+ +Y + EE + + N R + P + + Y +++++ A+ E +
Sbjct: 953 PDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQS--YKSLLAASAKAELREQAD 1010
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+IFEE S + I ++MM Y GN KAE + E+G +P T+A H
Sbjct: 1011 QIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEP------TIATMH 1064
Query: 433 I 433
I
Sbjct: 1065 I 1065
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 2/203 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + ALLN Y A + + + G YN ++ +Y + +E +++
Sbjct: 919 DLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLL 978
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM ++G+ + SY L++ E+ + +FE M+ K+ N + + M +Y
Sbjct: 979 NEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMR-SKSYQLNRSIYHMMMKIYRN 1037
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G KAE L ++ H L++ YG+ G+ E V N +S V+ L
Sbjct: 1038 AGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLP 1097
Query: 355 YHAMISSLARIGDI-EGMEKIFE 376
Y + + + GD G K+ E
Sbjct: 1098 YSTVFDAYLKNGDYNHGTTKLLE 1120
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT-LKDR 176
K R A+ +YD M G A + +D + K++ +A A + D LK
Sbjct: 410 KMGRLDLAVGLYDEMRAMG--CTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPT 467
Query: 177 RV-YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ + AL+ AY + R +AE D M G L Y VM+ ++ + + +++ +
Sbjct: 468 LIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYR 527
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+M R D Y + L + + E++E V + M++ +N ++TM IK
Sbjct: 528 KMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMN-----LGIISTMLIKA 582
Query: 296 GQVEKAEESLRR 307
V + + L++
Sbjct: 583 RCVSQGAKLLKK 594
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 1/166 (0%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
K+ Y +++ Y + A L D+MR G ++ Y VM+ K+ E +
Sbjct: 396 KNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKV 455
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ +M + G++ + +++ + + G E F+ M + V P+ + M ++
Sbjct: 456 LEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCM-IASGVKPDRLAYLVMLDVFA 514
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
+ G EK R++ + D Y LL K EE+ V
Sbjct: 515 RSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEV 560
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/457 (20%), Positives = 192/457 (42%), Gaps = 58/457 (12%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++K+L + + + A+E++DW+ + ER L + + D + L +
Sbjct: 33 LLKDLSRLGKDRRAMELFDWLRSANERSPLRQLCDVYSYTATISLCIYSQDVDRAMELMN 92
Query: 172 TLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
++ R + + AL+N ++ A + + MR + + YN ++ +Y K+
Sbjct: 93 EMRQRNIERNVHTFTALMNVCIKCGKLPLALEIYNNMRAANCMPNVVTYNTLVDVYGKLG 152
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++ ++ MK++G+ + +YN + +C + V++ + D PN TT+
Sbjct: 153 RWERAIHVLDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSD-GYTPNSTTY 211
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ + + Y K Q+ KA E + + + R + Y L+S G+ E R++N +
Sbjct: 212 NALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWETALRIFNEMQQ 271
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ Y++++++ A+ G E ++FE+ + + D ++S Y + G + K
Sbjct: 272 DNCVPNTVTYNSLVTACAQGGQWEKATEVFEQMTAHGCTPDVVTYTALISAYERGGQWQK 331
Query: 406 AEAFFNSIIEEGGKPNS--------TSWET----------------LAEGHIRERRILE- 440
A F + +G KP++ T WET + +GH R+ ++
Sbjct: 332 ALQAFGKMCMQGCKPDAIVYNAIIDTLWETGIIWAQGRALQLFLTAVQQGHFRQEPVVRR 391
Query: 441 ---------------ALSCLKG------AFAAEGAKSWRPKPVNVI-NFFKACEEESDMG 478
A+ CL AAE + P+ + ++ + KA E+ +
Sbjct: 392 AGRVEVNLHAMTAGVAMVCLYCWLLEIKRIAAEKGLAGLPQTLAIVTDMGKASREQGNCI 451
Query: 479 SKEAFVALLR--QPGYRKEKD--YMSLIGLTDEAVAE 511
KEA A++ +R +D Y S++ T V E
Sbjct: 452 VKEAVAAMMSFWDAPFRLVQDGAYASVLEATSAQVVE 488
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 22/283 (7%)
Query: 170 PDTLKDRRVYGALLNAY-VRARMRGNAELLIDKMRDKGY--AVHSLPYNVMMTLYMKIKE 226
PD Y AL+ V + + ELLI D GY + + + YN ++ + K E
Sbjct: 160 PDVFS----YNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGE 215
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
D+ + EM +G+ DV +YN + + +K + + M DK V P+ T++
Sbjct: 216 VDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHM-FDKGVMPDTRTYN 274
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
M Y +GQ+E+A L+++ D V Y L+ Y +G+ E RSV
Sbjct: 275 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEA-------RSV 327
Query: 347 FPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
F + G YH ++ A G + + + + + ++ R N+++ Y K
Sbjct: 328 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK 387
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
G DKA F + + G +P+ S+ T+ + R+ +A+
Sbjct: 388 HGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAV 430
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 120/266 (45%), Gaps = 9/266 (3%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDT R Y ++ Y A L+ KM G + Y++++ Y KI
Sbjct: 267 MPDT----RTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCA 322
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
E S+ M KG + + Y+I L ++G+ + + +LM D + F+ +
Sbjct: 323 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRD-GIPFEHRAFNIL 381
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
Y K G V+KA + + D V Y ++ + G+ E+ V++ + V
Sbjct: 382 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDA--VYHFNQMVSE 439
Query: 349 GVTN--LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
G++ + + ++I L IG+ + +E++ E ++ D N +M KEG +A
Sbjct: 440 GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEA 499
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGH 432
+ FF+ +I G KP+ S+ TL +G+
Sbjct: 500 QDFFDMVIHIGVKPDVVSYNTLIDGY 525
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 8/210 (3%)
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVN--PNWTT 284
D ++ + M E G DV+SYN + C + S E +E + M D N PN +
Sbjct: 144 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH-MTADGGYNCSPNVVS 202
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL-SLYGSVGKKEEVYRVWNLY 343
++T+ + K G+V+KA + + D V Y+ L+ L + + V + +++
Sbjct: 203 YNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMF 262
Query: 344 -RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ V P Y+ MI +G +E ++ ++ D +L++ +Y K G
Sbjct: 263 DKGVMPDTRT--YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGR 320
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+A + F+S++ +G KPNST + L G+
Sbjct: 321 CAEARSVFDSMVRKGQKPNSTIYHILLHGY 350
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 119/274 (43%), Gaps = 42/274 (15%)
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
++M +G + + + + ++ I E+ +VE + EM +GI D N + + +
Sbjct: 434 NQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKE 493
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G + + F+ M + V P+ +++T+ Y +G+++++ + L R+ S D
Sbjct: 494 GRVVEAQDFFD-MVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWT 552
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVF---------------PGVTNLG---------- 354
Y+ LL+ Y G+ E+ LYR +F G+ G
Sbjct: 553 YNSLLNGYFKNGRVEDA---LALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYM 609
Query: 355 -------------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
Y+ ++ L ++ ++FE+ S + D R +++++ +K G
Sbjct: 610 KMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVG 669
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
D+A++ F++++ G P+ ++ + + HI E
Sbjct: 670 RIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEE 703
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 111/275 (40%), Gaps = 15/275 (5%)
Query: 150 LDLIAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
+D + K V A+DFF + PD + Y L++ Y + +D+M
Sbjct: 487 MDNLCKEGRVVEAQDFFDMVIHIGVKPDVVS----YNTLIDGYCFVGKMDESIKQLDRMV 542
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
G S YN ++ Y K ++ ++ EM K ++ + NI L G
Sbjct: 543 SIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIV 602
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
++ M VD+ T++T+ + V++A + S+ D + +
Sbjct: 603 AARELYMKM-VDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIV 661
Query: 324 LSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
++ VG+ +E +++ + R P V + Y MI S G +E + +F
Sbjct: 662 INALLKVGRIDEAKSLFSAMVLRGPVPDV--ITYSLMIKSHIEEGLLEESDNLFLSMEKN 719
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+ D + N+++ +++G+ +A + I E+
Sbjct: 720 GCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEK 754
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 149/344 (43%), Gaps = 19/344 (5%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL- 169
R++ + K ++Y + +++ M G L + I L+ + ++ A F +
Sbjct: 86 RLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN--ILLNCFCRCSQLSLALSFLGKMM 143
Query: 170 -----PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
PD + +G+LLN + R +A + D+M + GY + + YN ++ K
Sbjct: 144 KLGHEPDIV----TFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKS 199
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
K+ D +++ M+ GIR D +YN +S + G + + M + + P+ T
Sbjct: 200 KQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCM-TKREIYPDVFT 258
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL---LSLYGSVGKKEEVYRVWN 341
F+ + +K G++ +AEE + R D V Y L L +Y + + E+++ +
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFG-FM 317
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ + FP V Y +I+ + +E K+F E + +++ Y + G
Sbjct: 318 VSKGCFPDVVT--YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAG 375
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ AE F ++ G PN ++ L G +I +AL L
Sbjct: 376 KLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVIL 419
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 124/316 (39%), Gaps = 75/316 (23%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++ +++ NA L+++M G ++ YN +++ +D+ MVS M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCM 247
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM------------------------- 272
++ I DV+++N + +C +G + E ++E M
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 273 ---------KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
V K P+ T+S + Y K +VE + + R R+ V Y L
Sbjct: 308 DEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVL 367
Query: 324 LSLYGSVGK---KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE----------- 369
+ Y GK EE+++ W ++ V P + + Y+ ++ L G IE
Sbjct: 368 IQGYCRAGKLNVAEEIFK-WMVFCGVPPNI--ITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 370 -GME-----------------KIFEEW-----LSVKS-SYDPRIANLMMSWYVKEGNFDK 405
GM+ ++ + W L++K + D MM K+G +
Sbjct: 425 SGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGE 484
Query: 406 AEAFFNSIIEEGGKPN 421
A+A F + E+G PN
Sbjct: 485 ADALFRKMKEDGILPN 500
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 151/325 (46%), Gaps = 9/325 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAA--IQLDLIAKVHGVASAEDFFLSLP--DTLKDRR 177
+K AL+++ M +G L+ S+ + + LD + K A F++ + R
Sbjct: 349 FKEALKMFYMMEAKG----LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ + A +L+++M G + Y+ ++ + K+ + + +V +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G+ + Y+ + +C G ++ ++E M ++ ++T F+ + T K G+
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT-FNVLVTSLCKAGK 523
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
V +AEE +R + S + V + L++ YG+ G+ + + V++ V T Y +
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ L + G + EK + +V ++ D + N +++ K GN KA + F +++
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 418 GKPNSTSWETLAEGHIRERRILEAL 442
P+S ++ +L G R+ + + A+
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIAI 668
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 154/363 (42%), Gaps = 19/363 (5%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S+ ++ EK G + T V+ K R+K A+E+ D M ++G + + I
Sbjct: 212 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 271
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRD 204
DL + + +A +L L D K + Y L+N + A L+++M
Sbjct: 272 -DL-CRSNRIAKG---YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 326
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
G + + + +N ++ ++ + E M M+ KG+ SY + L +
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 386
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
G + MK + V T++ M K G +++A L + D V Y L+
Sbjct: 387 ARGFYMRMKRN-GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Query: 325 SLYGSVGK----KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
+ + VG+ KE V R++ + S P + Y +I + R+G ++ +I+E +
Sbjct: 446 NGFCKVGRFKTAKEIVCRIYRVGLS--P--NGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ D N++++ K G +AE F + +G PN+ S++ L G+ L+
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561
Query: 441 ALS 443
A S
Sbjct: 562 AFS 564
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 110/268 (41%), Gaps = 3/268 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+N + L+ KM GYA + YN ++ Y K + ++
Sbjct: 192 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 251
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MK KG+ DV +YN+ + K + M+ + ++PN T++T+ +
Sbjct: 252 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR-KRMIHPNEVTYNTLINGFSN 310
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+V A + L + S + V ++ L+ + S G +E +++ + + + +
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFNSI 413
Y ++ L + + + + + F + RI M+ K G D+A N +
Sbjct: 371 YGVLLDGLCKNAEFD-LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
++G P+ ++ L G + R A
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTA 457
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 134/353 (37%), Gaps = 47/353 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L+ Y+R M ++ + M G+ N ++ +K E V S + EM
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ I DV ++NI ++ ++GS EK + + M+ P T++T+ Y K G+
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKME-KSGYAPTIVTYNTVLHWYCKKGR 243
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ A E L ++S+ D Y+ L+ + + + + + L R +
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIH---DLCRSNRIAKGYLLLRDM----------- 289
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
R I E + N +++ + EG A N ++ G
Sbjct: 290 ------RKRMIHPNEVTY---------------NTLINGFSNEGKVLIASQLLNEMLSFG 328
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
PN ++ L +GHI E EAL F AK P V+ + ++
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALK----MFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384
Query: 478 GSKEAFVALLRQPG-------YRKEKDYMSLIGLTDEAVAENNKKNDEDSDED 523
F +++ G Y D + G DEAV N+ + + D D
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 159/401 (39%), Gaps = 51/401 (12%)
Query: 91 ASVLNDWEKGGRSLTKWEL-CRV---------------VKELRKFRRYKHALEVYDWMNN 134
++++N + K GR T E+ CR+ + + K A+ +Y+ M
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501
Query: 135 RG---ERFRLSASDAAIQLDLIAKVHGVASAEDFFLS------LPDTLKDRRVYGALLNA 185
G + F + + + + K VA AE+F LP+T+ + L+N
Sbjct: 502 EGHTRDHFTFN-----VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS----FDCLING 552
Query: 186 YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD 245
Y + A + D+M G+ Y ++ K E E + + +D
Sbjct: 553 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 612
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
YN L++ G+ K +F M V +++ P+ T++++ + + G+ A
Sbjct: 613 TVMYNTLLTAMCKSGNLAKAVSLFGEM-VQRSILPDSYTYTSLISGLCRKGKTVIAILFA 671
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY-------HAM 358
+ E+R + +P + + + K ++ +R + NLG+ +AM
Sbjct: 672 KEAEAR---GNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE---QMDNLGHTPDIVTTNAM 725
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I +R+G IE + E + + N+++ Y K + + + SII G
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 419 KPNSTSWETLAEGHIRERRILE-ALSCLKGAFAAEGAKSWR 458
P+ + +L G I E +LE L LK AF G + R
Sbjct: 786 LPDKLTCHSLVLG-ICESNMLEIGLKILK-AFICRGVEVDR 824
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 16/176 (9%)
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL-SLYGS 329
LM + N N + + + +Y++ G ++ + E R + + G + P Y ++ GS
Sbjct: 112 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMG--LYGFN--PSVYTCNAILGS 167
Query: 330 VGKKEEVYRVWN-----LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
V K E VW+ L R + P V ++ +I+ L G E + ++ KS
Sbjct: 168 VVKSGEDVSVWSFLKEMLKRKICPDVAT--FNILINVLCAEGSFEKSSYLMQKM--EKSG 223
Query: 385 YDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
Y P I N ++ WY K+G F A + + +G + ++ L R RI
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 2/269 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++ Y +A A + M KG + Y M+ ++ ++
Sbjct: 256 DVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALY 315
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM EKG+++ +++++ + +G + VFE M + K PN ++ + Y K
Sbjct: 316 QEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENM-IRKGSKPNVAIYTVLIDGYAK 374
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G VE A L R+ D V Y +++ G+ EE + R + ++
Sbjct: 375 TGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMF 434
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y ++I L + G ++ E++FEE + D N ++ + K G D+A A F +
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRME 494
Query: 415 EEGGKPNST-SWETLAEGHIRERRILEAL 442
EE G + ++ L G +E R EAL
Sbjct: 495 EEEGCDQTVYTYTILISGMFKEHRNEEAL 523
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 125/268 (46%), Gaps = 7/268 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +L++ A+ + ++R + + P N ++ + K+ +E+ + +M
Sbjct: 154 CYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKM 213
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KE GI +Y+YN ++ S + E VFE+M+ + + P+ T++TM Y K GQ
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR-IKPDVVTYNTMIKGYCKAGQ 272
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+KA E LR +E++ D++ Y +++ + + LY+ + + HA
Sbjct: 273 TQKALEKLRVMETKGLEADKITY---MTMIQACYADSDFSSCVALYQEMDEKGLQVPPHA 329
Query: 358 ---MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
+I L + G + +FE + S + I +++ Y K G+ + A + +I
Sbjct: 330 FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMI 389
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEAL 442
+EG P+ ++ + G + R+ EA+
Sbjct: 390 DEGFNPDVVTYSVVVNGLCKNGRVEEAM 417
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 105/244 (43%), Gaps = 9/244 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y L++ Y + +A L+ +M D+G+ + Y+V++ K +E
Sbjct: 364 IYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTC 423
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G+ ++ Y+ + G G ++ E +FE M +K + ++ + + K G+
Sbjct: 424 RFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS-EKGCTRDSYCYNALIDAFTKHGK 482
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG--KKEEVYRVWNLY--RSVFPGVTNL 353
V++A +R+E G D+ Y Y + + G + EE ++W++ + + P L
Sbjct: 483 VDEALALFKRMEEE-EGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACL 541
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
A+ + L G + KI +E + D + M++ K G +A + I
Sbjct: 542 --RALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGI 598
Query: 414 IEEG 417
E G
Sbjct: 599 TERG 602
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 144/310 (46%), Gaps = 19/310 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ Y +A NA L ++M G + + Y ++ K E D ++
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM++KG++L+V YN ++ G+ E+ + + M+V ++P+ T++T+ Y +
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV-AGIDPDAITYTTVIDAYCR 550
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV--WNLYRSVFPGVTN 352
+G ++KA + L+ + R V ++ L++ + +G E+ R+ W L + + P
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA-- 608
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+ ++ + KI++ + + D N+++ + K N +A +
Sbjct: 609 ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKE 668
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA---LSCLKG-AFAAEGAKSWRPKPVNVINFF 468
+IE+G P TS+ L + ++R+ EA ++G A+G + NFF
Sbjct: 669 MIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADG---------EIYNFF 719
Query: 469 -KACEEESDM 477
C EE D+
Sbjct: 720 VDMCYEEGDV 729
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 9/288 (3%)
Query: 149 QLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
+L + + H + DF S PD + Y +++ Y A L+D M+ KG
Sbjct: 270 RLGKVKEAHRLLMQMDFRSSTPDVVS----YSTVIDGYCHLGELKKALKLMDDMQIKGLK 325
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ YN ++ L KI + E E ++ EM + I D Y + G
Sbjct: 326 PNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKW 385
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
F+ M + K ++P++ T++T+ + + G+V + + + SR D V Y L+ +Y
Sbjct: 386 FDEM-LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444
Query: 329 SVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
G+ + + N + + P + G A+I L + G+++ ++ +E +
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYG--ALIDGLCKHGELDTANELLDEMRKKGLQLN 502
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
I N M++ K GN ++A + G P++ ++ T+ + + R
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 116/253 (45%), Gaps = 9/253 (3%)
Query: 184 NAYVRARMRGNAE---LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
NA++ +R+ N+E + I + G + ++ YN+++ ++ + E ++ +M +
Sbjct: 229 NAFL-SRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFR 287
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
DV SY+ + G +K + + M++ K + PN T++++ + K+G+ +
Sbjct: 288 SSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQI-KGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAM 358
AE+ LR + S+ D V Y L+ + +G + ++ L + + P + Y +
Sbjct: 347 AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY--ITYTTL 404
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I + G + + +F E +S D ++ Y K G A + N +++ G
Sbjct: 405 IQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464
Query: 419 KPNSTSWETLAEG 431
PN ++ L +G
Sbjct: 465 TPNIVTYGALIDG 477
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 111/238 (46%), Gaps = 7/238 (2%)
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
K + + + +++ + ++I E ++ ++ G+ + V S N +LS +
Sbjct: 184 KYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNS---- 239
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMY--IKMGQVEKAEESLRRVESRITGRDRVPYHY 322
EG+ +KV +W T S +Y ++G+V++A L +++ R + D V Y
Sbjct: 240 -EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
++ Y +G+ ++ ++ + + Y+++I L +IG EK+ E +S K
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
D + ++ + K G+ A +F+ ++ + P+ ++ TL +G + +++E
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIE 416
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ + +AR A L +M +KGY YN ++ + K +++ E +
Sbjct: 642 DSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELF 701
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
EM+ G+ D YN ++ C +G E
Sbjct: 702 EEMRGHGLVADGEIYNFFVDMCYEEGDVE 730
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++A A A+ L KMR + + Y +M+ + + + V+
Sbjct: 296 DVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFW 355
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM+ G DV +Y I + + G ++ + ++M+V + + PN T++T+ + +
Sbjct: 356 SEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRV-RGIVPNLHTYNTLISGLLN 414
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
+ ++++A E +ES Y + YG +G E+ + R + P +
Sbjct: 415 LRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIA- 473
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+A + SLA +G I + IF + + S D N+MM Y K G DKA
Sbjct: 474 -ACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTE 532
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
++ EG +P+ +L + + R+ EA
Sbjct: 533 MLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 117/258 (45%), Gaps = 5/258 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ A ++ A ++D MR +G + YN +++ + ++ DE +
Sbjct: 366 DVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELF 425
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M+ G+ YSY +++ G G EK FE MK + + P+ + +
Sbjct: 426 NNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMK-KRGIMPSIAACNASLYSLAE 484
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
MG++ +A++ + + D V Y+ ++ Y G+ ++ ++ L P +
Sbjct: 485 MGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIV 544
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ +++I +L + G ++ ++F +K + N++++ KEG KA F S
Sbjct: 545 V--NSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGS 602
Query: 413 IIEEGGKPNSTSWETLAE 430
+ E G PN+ ++ L +
Sbjct: 603 MKESGCPPNTVTFNALLD 620
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 123/291 (42%), Gaps = 4/291 (1%)
Query: 155 KVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGN---AELLIDKMRDKGYAVHS 211
+VHG F L R L + ++G A + KMR G+ +++
Sbjct: 133 RVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNA 192
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
YN ++ ++ E + M +G++ + +Y+ + + G + T + + E
Sbjct: 193 YSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEE 252
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M+ + PN T++ + + G+++ A L+ +E G D V Y L+ + G
Sbjct: 253 MET-LGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAG 311
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
K ++ ++ R+ + Y ++S GD+E +++ + E + + D
Sbjct: 312 KLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYT 371
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+++ K G D+A + + G PN ++ TL G + RR+ EAL
Sbjct: 372 ILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 109/276 (39%), Gaps = 49/276 (17%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP--YNVMMTLYMKIKEYDEVE 231
+D + L+ + + +A+ L DK K H P YN +M + +
Sbjct: 750 QDDNLILPLIRVLCKQKKALDAKKLFDKFT-KSLGTHPTPESYNCLMDGLLGCNITEAAL 808
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMA 289
+ EMK G ++++YN+ L + G +++++ +FEL + + PN T + +
Sbjct: 809 KLFVEMKNAGCCPNIFTYNLLLDA---HGKSKRIDELFELYNEMLCRGCKPNIITHNIII 865
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+ +K + KA +LY + G
Sbjct: 866 SALVKSNSINKA--------------------------------------LDLYYEIISG 887
Query: 350 ---VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
T Y +I L + G E KIFEE + + I N++++ + K GN + A
Sbjct: 888 DFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIA 947
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F +I+EG +P+ S+ L E R+ +A+
Sbjct: 948 CDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAV 983
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 122/291 (41%), Gaps = 10/291 (3%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+ N+ E G + T + + K + AL+ ++ M RG ++A +A+ L
Sbjct: 424 LFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNAS--LYS 481
Query: 153 IAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+A++ + A+D F + + D Y ++ Y +A A L+ +M +G
Sbjct: 482 LAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPD 541
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
+ N ++ K DE M +K+ + V +YNI ++ G +G K +F
Sbjct: 542 IIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFG 601
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
MK + PN TF+ + K V+ A + R+ D + Y+ + +YG +
Sbjct: 602 SMK-ESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTI--IYGLI 658
Query: 331 GKKEEVYRVWNLYRSV--FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
+ Y W Y + F ++ + ++ + + G +E KI E++
Sbjct: 659 KEGRAGYAFW-FYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFV 708
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 125/313 (39%), Gaps = 40/313 (12%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKD 175
K +R E+Y+ M RG + + + I + + K + + A D + + D
Sbjct: 835 KSKRIDELFELYNEMLCRGCKPNIITHN--IIISALVKSNSINKALDLYYEIISGDFSPT 892
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
YG L+ ++A A + ++M D + YN+++ + K + +
Sbjct: 893 PCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFK 952
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
M ++GIR D+ SY I + G + FE +K+ ++P+ +++ M +
Sbjct: 953 RMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKL-TGLDPDTVSYNLMIN---GL 1008
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G+ + EE+L L S + G E+Y Y
Sbjct: 1009 GKSRRLEEALS----------------LFSEMKNRGISPELYT----------------Y 1036
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+A+I G ++ K+FEE + + N ++ + K GN D+A + F ++
Sbjct: 1037 NALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMI 1096
Query: 416 EGGKPNSTSWETL 428
G PN+ ++ L
Sbjct: 1097 VGCSPNAGTFAQL 1109
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 114/302 (37%), Gaps = 34/302 (11%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ + + A L +M++ G + YN+++ + K K DE+ + +EM
Sbjct: 791 YNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEML 850
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEK--------MEGVF--------------------- 269
+G + ++ ++NI +S+ S K + G F
Sbjct: 851 CRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSE 910
Query: 270 ELMKV-----DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
E MK+ D PN ++ + + K G V A + +R+ D Y L+
Sbjct: 911 EAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILV 970
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
G+ ++ + + + Y+ MI+ L + +E +F E + S
Sbjct: 971 ECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGIS 1030
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
+ N ++ + G D+A F + G +PN ++ L GH + A S
Sbjct: 1031 PELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSV 1090
Query: 445 LK 446
K
Sbjct: 1091 FK 1092
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 131/288 (45%), Gaps = 25/288 (8%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LPD + + G+L Y + + A + D M KG + Y +M+ Y
Sbjct: 321 LPDVVTLSMLMGSLCK-YGKIK---EARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLV 376
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
++ + M GI D+Y++N+ + + + G +K +F M+ D V P+ T+ T+
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR-DHGVKPDVVTYRTV 435
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL---SLYGSVGKKEEVYRVWNLYRS 345
++G+++ A E ++ + D+ YH L+ +GS+ K +E+
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL--------- 486
Query: 346 VFPGVTNLGYH-------AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
+ N G H ++I++L ++G + + IF+ ++V + +++M Y
Sbjct: 487 -ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYC 545
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G +KA F++++ G +PN + TL G+ + RI E LS +
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 168/402 (41%), Gaps = 29/402 (7%)
Query: 68 RPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKW-ELCRVVKELR--------- 117
R M K A R++ ++ L + N+ G S +W E RV KE+R
Sbjct: 268 RAMDKAEAFLRQM--VNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 325
Query: 118 ----------KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF- 166
K+ + K A +V+D M +G+ + + I L+ A + D F
Sbjct: 326 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSY--TIMLNGYATKGCLVDMTDLFD 383
Query: 167 LSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
L L D + D + L+ AY M A ++ ++MRD G + Y ++ +I
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM-EGVFELMKVDKAVNPNWTT 284
+ D+ ++M ++G+ D Y+Y+ + + GS K E + E+M + ++ +
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIM--NNGMHLDIVF 501
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
FS++ K+G+V A+ + V Y L+ Y VGK E+ RV++
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV 561
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S ++ Y +++ +IG I+ +F E L + N+++ + G
Sbjct: 562 SAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 621
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
A+ F+ + E G N ++ + G + R EA+ K
Sbjct: 622 PAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFK 663
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 136/336 (40%), Gaps = 41/336 (12%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGA--LLNAYVRARMRGNA-ELLIDKMR 203
AI +D + H A FF L T + A LL + A+ A ++L+ +
Sbjct: 115 AILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTP 174
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL--DVYSYNIWLSSCGSQGS 261
+ G Y++++ + + + ++ M E G DV +Y+ + +G
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGD 234
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
K +F+ M V + + P++ T+S++ K ++KAE LR++ ++ + Y+
Sbjct: 235 VNKACDLFKEM-VQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYN 293
Query: 322 YLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLG------------------------- 354
L+ Y S G+ +E RV+ R S+ P V L
Sbjct: 294 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 353
Query: 355 --------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
Y M++ A G + M +F+ L + D N+++ Y G DKA
Sbjct: 354 GQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKA 413
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
FN + + G KP+ ++ T+ R ++ +A+
Sbjct: 414 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++ A A++ +M + G A++ YN+++ K + +DE + E+
Sbjct: 606 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKEL 665
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +++++ + N ++ E+ + +F + V P T+S M T IK G
Sbjct: 666 RAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV-PCVVTYSIMITNLIKEGL 724
Query: 298 VEKAEESLRRVESRITGRD-RVPYHYLLSLYGSVGKKEEVYR 338
VE+AE+ +++ D R+ H + L KK E+ R
Sbjct: 725 VEEAEDMFSSMQNAGCEPDSRLLNHVVRELL----KKNEIVR 762
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/164 (17%), Positives = 71/164 (43%), Gaps = 1/164 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
++ Y +L + R A L ++R ++ + N M+ + + +E + +
Sbjct: 638 NKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLF 697
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ + G+ V +Y+I +++ +G E+ E +F M+ + P+ + + +K
Sbjct: 698 ASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ-NAGCEPDSRLLNHVVRELLK 756
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
++ +A L +++ R + + L+ L+ S G E R
Sbjct: 757 KNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIR 800
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 150/333 (45%), Gaps = 27/333 (8%)
Query: 115 ELRKFRRYKHALEVYDWMNNRGERFRLSA------SDAAIQLDLIAKVHGVASAEDFFLS 168
+L + + + A+E++DW+ + ER L A A I L +HG D L
Sbjct: 112 DLSRLGKDRRAMELFDWLRSANERSPLRALCDVYSYTATISL----CIHG--QDVDRALE 165
Query: 169 LPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
L ++ R + Y AL+N ++ A + + MR + + YN ++ +Y
Sbjct: 166 LMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIYNSMRAVNCMPNVVTYNTLVDVYG 225
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
K+ +++ ++ MK +G+ + +YN + +C + V++ + D PN
Sbjct: 226 KLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSD-GFTPNS 284
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
TT++ + + Y K Q+ KA E + + + R + Y L+S G+ E R++N
Sbjct: 285 TTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIFNE 344
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ + Y++++++ A+ G E ++FE+ + + D ++S Y + G
Sbjct: 345 MQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTALISAYERGGQ 404
Query: 403 FDKAEAFFNSIIEEGGKPNS--------TSWET 427
+ KA F+ + +G KP++ T WET
Sbjct: 405 WQKALQAFHKMCVQGCKPDAIVYNAIIDTLWET 437
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 1/204 (0%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y L+ A A + ++ G+ +S YN +++ Y K + + + E
Sbjct: 250 RTYNTLIIACNMCNQPREALAVYQRLLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQE 309
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M + + V +Y+ +S+C G E +F M+ DK V PN T++++ T + G
Sbjct: 310 MLRQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQDKCV-PNTVTYNSLVTACAQGG 368
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
Q EKA E ++ + D V Y L+S Y G+ ++ + ++ + Y+
Sbjct: 369 QWEKAAEVFEQMNAHGCTPDVVTYTALISAYERGGQWQKALQAFHKMCVQGCKPDAIVYN 428
Query: 357 AMISSLARIGDIEGMEKIFEEWLS 380
A+I +L G I K + +++
Sbjct: 429 AIIDTLWETGIIWAQGKALQLFMT 452
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 167/402 (41%), Gaps = 29/402 (7%)
Query: 68 RPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKW-ELCRVVKELR--------- 117
R M K A R++ ++ L N+ G S +W E RV KE+R
Sbjct: 270 RAMDKAEAFLRQM--VNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV 327
Query: 118 ----------KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF- 166
K+ + K A +V+D M +G+ + + I L+ A + D F
Sbjct: 328 ALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY--TIMLNGYATKGCLVDMTDLFD 385
Query: 167 LSLPDTLKDR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
L L D + + L+ AY M A ++ ++MRD G H + Y ++ +I
Sbjct: 386 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM-EGVFELMKVDKAVNPNWTT 284
+ D+ ++M ++G+ D Y+Y+ + + GS K E + E+M + + +
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM--NNGMRLDIVF 503
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
F ++ K+G+V A+ + D V Y+ L+ Y VGK E+ RV++
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S +GY +++ +IG I+ +F E L + N+++ + G
Sbjct: 564 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 623
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
A+ F+ + E G N ++ + G + R EA+ K
Sbjct: 624 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 665
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 130/342 (38%), Gaps = 71/342 (20%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++++A +AR AE + +M +KG + YN ++ Y ++ E +
Sbjct: 255 DLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVF 314
Query: 235 SEMKEKGI-----------------------------------RLDVYSYNIWLSSCGSQ 259
EM+ + I DV+SY I L+ ++
Sbjct: 315 KEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATK 374
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G M +F+LM D + P TF+ + Y G ++KA + V
Sbjct: 375 GCLVDMTDLFDLMLGD-GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVT 433
Query: 320 YHYLLSLYGSVGKKEEVYRVWN------------LYRSVFPGVTNLG------------- 354
Y +++ +GK ++ +N Y + G G
Sbjct: 434 YMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM 493
Query: 355 ----------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ ++I++L ++G + + IF+ ++V D + N++M Y G +
Sbjct: 494 NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKME 553
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
KA F++++ G +PN + TL G+ + RI E LS +
Sbjct: 554 KALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 595
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 129/293 (44%), Gaps = 10/293 (3%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDT-LK-DRRVYGALLNAYVRARMRGNA-ELLIDKMR 203
AI +D + H A FF L T L+ D + LL + A+ A ++L+ +
Sbjct: 117 AILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTP 176
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL--DVYSYNIWLSSCGSQGS 261
+ G YN+++ + + + ++ M E G DV +YN + +G
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
K +F+ M V + + P+ T+S++ K ++KAE LR++ ++ D Y+
Sbjct: 237 VNKACDLFKEM-VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYN 295
Query: 322 YLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
L+ Y S G+ +E RV+ R S+ P V L + ++ SL + G I+ +F+
Sbjct: 296 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVAL--NTLMGSLCKYGKIKEARDVFDTMA 353
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ D +M++ Y +G F+ ++ +G P ++ L + +
Sbjct: 354 MKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 406
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++ A A++ +M + G A++ Y++++ K + +DE + E+
Sbjct: 608 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 667
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +++D+ + N ++ E+ + +F + V P T+S M T IK G
Sbjct: 668 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV-PCAVTYSIMITNLIKEGL 726
Query: 298 VEKAEESLRRVESRITGRD-RVPYHYLLSLYGSVGKKEEVYR 338
VE+AE+ +++ D R+ H + L KK E+ R
Sbjct: 727 VEEAEDMFSSMQNAGCEPDSRLLNHVVRELL----KKNEIVR 764
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 8/268 (2%)
Query: 179 YGALLNAYVRARMRGN---AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
Y +L++ Y + GN ++L+ +M + G + ++ + V++ Y K +
Sbjct: 229 YNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFE 288
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EMK++GI V +YN +S S+G E+ + E M+ D ++PN TF + + K
Sbjct: 289 EMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME-DLGLSPNEITFGCVLKGFCKK 347
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNL 353
G + A + + + R D V Y+ L+ +Y +GK E+ V + + P VT
Sbjct: 348 GMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTT- 406
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ +I+ +R GD + +E D N+++ +G KA + +
Sbjct: 407 -YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEM 465
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
E G +PN ++ T+ +G + I A
Sbjct: 466 SEVGLEPNHLTYNTIIQGFCDKGNIKSA 493
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +Y L++ Y R +A + + M KG + + YN ++T + + ++ ++
Sbjct: 368 DVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EMKEKGI DV +YN+ + + +G K + + M + + PN T++T+ +
Sbjct: 428 DEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS-EVGLEPNHLTYNTIIQGFCD 486
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFP-GVT 351
G ++ A E R+E + V Y+ + + +GK +E + N L + + P G+T
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 94/227 (41%), Gaps = 10/227 (4%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+N +++ +I + + + ++K G+ V +YN + +G M V L+K
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLK 253
Query: 274 --VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
V+ ++P TF + Y K A ++ + V Y+ L+S S G
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS--VKSSYDPRI 389
K EE ++ + + + ++ + +GM +W+ + + +P +
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCK----KGMMADANDWIDGMTERNVEPDV 369
Query: 390 A--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
N+++ Y + G + A A ++ ++G PN T++ L G R
Sbjct: 370 VIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
V+P+ TF+T+ + ++GQ+ KA + + +++ Y+ L+ Y G +Y
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 338 RVWNLYRS-VFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
V L + V G+ T + + +I+ + + ++FEE + N ++
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
S EG ++ + + G PN ++ + +G ++ + +A
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADA 353
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 153/370 (41%), Gaps = 28/370 (7%)
Query: 66 ERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTK---WELCRVVKEL-RKFRR 121
ERR ++ +++ L +P A L + R TK E C + EL R R
Sbjct: 62 ERR-VVGTDSVVHMLRSAPDP----AEALELFTAAARQPTKVHTTESCNYMLELMRAHGR 116
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGA 181
+V+D M + + + A + G E S P L R G
Sbjct: 117 VGDMAQVFDLMQKQVVKTNVGT---------FATIFGGVGVEGGLRSAPVALPVMREAGM 167
Query: 182 LLNAY---------VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
LNAY V++ A + M + G + Y+V+M + K ++ D V
Sbjct: 168 SLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLW 227
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+++EM+ +G++ +VYSY I + G ++ + M+ D P+ T + + +
Sbjct: 228 LLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKME-DSGCKPDVVTHTVIIQVL 286
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G++ A+ ++++ DRV Y LL G G + V VWN +
Sbjct: 287 CDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNI 346
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y A++ +L ++G ++ +F+E S + N ++S ++K FD+A FN
Sbjct: 347 VSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNH 406
Query: 413 IIEEGGKPNS 422
+ G PN
Sbjct: 407 MNACGPSPNG 416
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 118/255 (46%), Gaps = 9/255 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ V+++ A L + +G++ Y ++ +K + + E++ +EM
Sbjct: 838 TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEM 897
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G + YNI L+ G+TE + +FE M V++ +NP+ +++ + G+
Sbjct: 898 LEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKM-VEQGINPDIKSYTILIDTLCTAGR 956
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGY 355
+ R++ D + Y+ L+ G + EE ++N + + P + Y
Sbjct: 957 LNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYT--Y 1014
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSI 413
+++I L + G +++EE L + + P + N ++ Y G+ D A A + +
Sbjct: 1015 NSLILHLGKAGKAAEAAQMYEELL--RKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQM 1072
Query: 414 IEEGGKPNSTSWETL 428
I G +PNS+++ L
Sbjct: 1073 IVGGCQPNSSTYMQL 1087
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 130/306 (42%), Gaps = 50/306 (16%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS--- 235
Y A+++A + A + D+M++KG + YN +++ ++K +D + +
Sbjct: 349 YTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMN 408
Query: 236 --------------------------------EMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
MK KGI DV + N L S G
Sbjct: 409 ACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLG 468
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIK-MGQVEKAEESLR----RVESRITGRDRV 318
+ VF +K V+P+ T+ TM IK + KA+E++ VES D +
Sbjct: 469 MAKRVFYELKA-MGVSPDTITY----TMMIKCCSKASKADEAMNFFSDMVESGCV-PDVL 522
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
+ L+ GK E +++++ + + TN Y+ ++S L R G ++ + ++ EE
Sbjct: 523 ALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEM 582
Query: 379 LSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
++ Y P + N ++ K G + A S+ E+G P+ +S+ T+ G I+E
Sbjct: 583 --TRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEE 640
Query: 437 RILEAL 442
R+ EA
Sbjct: 641 RLEEAF 646
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 5/251 (1%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A L +K + G ++ + YN ++ + D E + +EMK G D ++YN+ L
Sbjct: 750 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 809
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ G E+M V + M K + T++T+ + +K ++E+A + + S
Sbjct: 810 AMGKSMRVEEMLKVQKEMH-RKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFS 868
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
Y LL GK + ++N L P T Y+ +++ G+ E +
Sbjct: 869 PTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTI--YNILLNGHRIAGNTENVC 926
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
++FE+ + + D + +++ G + +F + E G +P+ + L +G
Sbjct: 927 QLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGL 986
Query: 433 IRERRILEALS 443
+ RI EA+S
Sbjct: 987 GKSERIEEAVS 997
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 91/468 (19%), Positives = 181/468 (38%), Gaps = 70/468 (14%)
Query: 19 RTQPLPCKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIHSYGTV-------DFERRPMI 71
R+ P P + FT +Q H + + + + ++G V D ++ ++
Sbjct: 76 RSAPDPAEALELFTAAARQPTKVHTTESCNYM---LELMRAHGRVGDMAQVFDLMQKQVV 132
Query: 72 KWN-----AIFRKLSLMDNPQLGSASV-LNDWEKGGRSLTKWELCRVVKELRKFRRYKHA 125
K N IF + + L SA V L + G SL + ++ L K A
Sbjct: 133 KTNVGTFATIFGGVGVEGG--LRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEA 190
Query: 126 LEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNA 185
+EVY M G +S S + ++A G D L L + ++ R V + +
Sbjct: 191 MEVYKAMVEDG----ISPSVRTYSVLMVA--FGKKRDVDTVLWLLNEMEARGVKPNVYSY 244
Query: 186 YVRARMRGNAEL------LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
+ R+ G A ++ KM D G + + V++ + + +++ +MK
Sbjct: 245 TICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKA 304
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+ D +Y L CG G ++ + V+ M D N N +++ + ++G+V+
Sbjct: 305 SDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVAD-GYNDNIVSYTAVVDALCQVGRVD 363
Query: 300 KAEESLRRVESRITGRDRVPYHYLLS---------------------------------- 325
+A ++ + ++ Y+ L+S
Sbjct: 364 EALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFI 423
Query: 326 -LYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
YG G+ + + + +S + P V +A++ SLA G + +++F E ++
Sbjct: 424 NYYGKSGQSLKAIQRYEHMKSKGIVPDVA--AANAVLYSLAGSGRLGMAKRVFYELKAMG 481
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
S D +M+ K D+A FF+ ++E G P+ + +L +
Sbjct: 482 VSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLID 529
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 106/253 (41%), Gaps = 7/253 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+ V + AE L +M+ G YN+++ K +E+ + EM
Sbjct: 769 YNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMH 828
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG +YN +S S+ + ++ + LM + +P T+ + +K G+
Sbjct: 829 RKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS--EGFSPTPCTYGPLLDGLLKSGK 886
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+ AE + + Y+ LL+ + G E V +++ + + + P + + Y
Sbjct: 887 MVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKS--Y 944
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I +L G + F + + D + NL++ K ++A + FN + +
Sbjct: 945 TILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKK 1004
Query: 416 EGGKPNSTSWETL 428
+G PN ++ +L
Sbjct: 1005 KGIIPNLYTYNSL 1017
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 111/269 (41%), Gaps = 9/269 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL+ R L+++M Y + + YN ++ K E + M+ M
Sbjct: 558 TYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSM 617
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM-KVDKAVNPNWTTFSTMATMYIKMG 296
EKG D+ SYN + + E++E F + ++ K + P++ T T+ ++K G
Sbjct: 618 TEKGCAPDLSSYNTVMYGLIKE---ERLEEAFRMFCQMKKILAPDYATLCTILPSFVKNG 674
Query: 297 QVEKAEESLRR-VESRITGRDRVPYHYLL-SLYGSVGKKEEVYRVWNLY-RSVFPGVTNL 353
+++A +++ + D+ +H L+ + G ++ + N+ R + + +
Sbjct: 675 LMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGIL--LNDF 732
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+I L + ++F ++ + S N ++ V E D AE F +
Sbjct: 733 FLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEM 792
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
G P+ ++ + + + R+ E L
Sbjct: 793 KRLGCGPDEFTYNLILDAMGKSMRVEEML 821
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 137/338 (40%), Gaps = 28/338 (8%)
Query: 114 KELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL---- 169
+ L+ +RY+H M ++G ++A++A L +A + A+ F L
Sbjct: 431 QSLKAIQRYEH-------MKSKGIVPDVAAANAV--LYSLAGSGRLGMAKRVFYELKAMG 481
Query: 170 --PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
PDT+ Y ++ +A A M + G L N ++ K +
Sbjct: 482 VSPDTI----TYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKG 537
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
+E + ++KE I +YN LS G +G +++ + E M PN T++T
Sbjct: 538 NEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEM-TRTIYPPNLITYNT 596
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK--EEVYRVWNLYRS 345
+ K G+V A + L + + D Y+ + +YG + ++ EE +R++ +
Sbjct: 597 VLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTV--MYGLIKEERLEEAFRMFCQMKK 654
Query: 346 VF-PGVTNLGYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+ P L ++ S + G + E + + E L + D + +M +K+
Sbjct: 655 ILAPDYATL--CTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGV 712
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+K+ F +I G N L + ++ LEA
Sbjct: 713 EKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEA 750
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 170/382 (44%), Gaps = 44/382 (11%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
A VL+D + +T + C VVK + + ++ ALEVY+W+N R + +A A L
Sbjct: 116 ADVLDDRKV---QMTPTDFCFVVKWVGQ-SSWQRALEVYEWLNLR-HWYSPNARMLATIL 170
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
++ K + A A + F + +VY A++ Y R + L+D MR +G
Sbjct: 171 SVLGKANQEALAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEP 230
Query: 210 HSLPYNVMMTLYMK--IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ +N ++ +K + +++E++ GI+ D+ +YN +S+C + + E+
Sbjct: 231 DLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVK 290
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR------IT-------- 313
V+ M V P+ T++ M ++Y + G +A + +ES+ +T
Sbjct: 291 VYNDM-VAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAF 349
Query: 314 ---------------------GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G+D + Y+ ++ +YG G+ + +++++ +
Sbjct: 350 AREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDA 409
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y +I SL + I+ ++ E L+ + R + ++ Y K G +AE F+
Sbjct: 410 VTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDC 469
Query: 413 IIEEGGKPNSTSWETLAEGHIR 434
++ G KP+ ++ + + +R
Sbjct: 470 MLRSGIKPDHLAYSVMLDILLR 491
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 115/316 (36%), Gaps = 61/316 (19%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y +LL A+ R + + + M G+ + YN ++ +Y K ++D
Sbjct: 336 LPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQ 395
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ S+MK G D +Y + + S G ++ V M ++ V P TFS + Y
Sbjct: 396 LYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEM-LNARVKPTLRTFSALICGY 454
Query: 293 IKMGQVEKAEES-----------------------LRRVESRITGR------------DR 317
K G+ +AEE+ LR ES + D
Sbjct: 455 AKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDH 514
Query: 318 VPYHYLLSLYGSVGKKEEVYRVW-----------NLYRSVFPGVTNLGYHAMISSLA--- 363
Y +L + G ++E+V++V + S+ + A + LA
Sbjct: 515 ALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLAISQ 574
Query: 364 -----------RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
G G E++FE LS + D ++MM + GN KAE
Sbjct: 575 GCELDQYGKARDFGLFCGTEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGV 634
Query: 413 IIEEGGKPNSTSWETL 428
+ E G +P + L
Sbjct: 635 MKEAGVEPTIATMHLL 650
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 92/214 (42%), Gaps = 5/214 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A+++ Y R M A L + KG+ ++ YN ++ + + D+V+ +
Sbjct: 303 DLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEIC 362
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M + G D +YN + G +G + ++ MK+ +P+ T++ + K
Sbjct: 363 EDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKL-SGRSPDAVTYTVLIDSLGK 421
Query: 295 MGQVEKAEESLRR-VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+++A E + + +R+ R + L+ Y GK+ E ++ +L
Sbjct: 422 ANMIKEAAEVMSEMLNARVKPTLRT-FSALICGYAKAGKRVEAEETFDCMLRSGIKPDHL 480
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
Y M+ L R + K+++E V S+ P
Sbjct: 481 AYSVMLDILLRFNESGKAMKLYQEM--VLHSFKP 512
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 151/325 (46%), Gaps = 9/325 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAA--IQLDLIAKVHGVASAEDFFLSLP--DTLKDRR 177
+K AL+++ M +G L+ S+ + + LD + K A F++ + R
Sbjct: 389 FKEALKMFYMMEAKG----LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ + A +L+++M G + Y+ ++ + K+ + + +V +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G+ + Y+ + +C G ++ ++E M ++ ++T F+ + T K G+
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT-FNVLVTSLCKAGK 563
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
V +AEE +R + S + V + L++ YG+ G+ + + V++ V T Y +
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ L + G + EK + +V ++ D + N +++ K GN KA + F +++
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 418 GKPNSTSWETLAEGHIRERRILEAL 442
P+S ++ +L G R+ + + A+
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIAI 708
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 154/363 (42%), Gaps = 19/363 (5%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S+ ++ EK G + T V+ K R+K A+E+ D M ++G + + I
Sbjct: 252 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 311
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRD 204
DL + + +A +L L D K + Y L+N + A L+++M
Sbjct: 312 -DL-CRSNRIAKG---YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
G + + + +N ++ ++ + E M M+ KG+ SY + L +
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 426
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
G + MK + V T++ M K G +++A L + D V Y L+
Sbjct: 427 ARGFYMRMKRN-GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Query: 325 SLYGSVGK----KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
+ + VG+ KE V R++ + S P + Y +I + R+G ++ +I+E +
Sbjct: 486 NGFCKVGRFKTAKEIVCRIYRVGLS--P--NGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ D N++++ K G +AE F + +G PN+ S++ L G+ L+
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601
Query: 441 ALS 443
A S
Sbjct: 602 AFS 604
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 110/268 (41%), Gaps = 3/268 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+N + L+ KM GYA + YN ++ Y K + ++
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 291
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MK KG+ DV +YN+ + K + M+ + ++PN T++T+ +
Sbjct: 292 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR-KRMIHPNEVTYNTLINGFSN 350
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+V A + L + S + V ++ L+ + S G +E +++ + + + +
Sbjct: 351 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFNSI 413
Y ++ L + + + + + F + RI M+ K G D+A N +
Sbjct: 411 YGVLLDGLCKNAEFD-LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
++G P+ ++ L G + R A
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTA 497
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 134/353 (37%), Gaps = 47/353 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L+ Y+R M ++ + M G+ N ++ +K E V S + EM
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ I DV ++NI ++ ++GS EK + + M+ P T++T+ Y K G+
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKME-KSGYAPTIVTYNTVLHWYCKKGR 283
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ A E L ++S+ D Y+ L+ + + + + + L R +
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIH---DLCRSNRIAKGYLLLRDM----------- 329
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
R I E + N +++ + EG A N ++ G
Sbjct: 330 ------RKRMIHPNEVTY---------------NTLINGFSNEGKVLIASQLLNEMLSFG 368
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
PN ++ L +GHI E EAL F AK P V+ + ++
Sbjct: 369 LSPNHVTFNALIDGHISEGNFKEALK----MFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 424
Query: 478 GSKEAFVALLRQPG-------YRKEKDYMSLIGLTDEAVAENNKKNDEDSDED 523
F +++ G Y D + G DEAV N+ + + D D
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 159/401 (39%), Gaps = 51/401 (12%)
Query: 91 ASVLNDWEKGGRSLTKWEL-CRV---------------VKELRKFRRYKHALEVYDWMNN 134
++++N + K GR T E+ CR+ + + K A+ +Y+ M
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541
Query: 135 RG---ERFRLSASDAAIQLDLIAKVHGVASAEDFFLS------LPDTLKDRRVYGALLNA 185
G + F + + + + K VA AE+F LP+T+ + L+N
Sbjct: 542 EGHTRDHFTFN-----VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS----FDCLING 592
Query: 186 YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD 245
Y + A + D+M G+ Y ++ K E E + + +D
Sbjct: 593 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 652
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
YN L++ G+ K +F M V +++ P+ T++++ + + G+ A
Sbjct: 653 TVMYNTLLTAMCKSGNLAKAVSLFGEM-VQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY-------HAM 358
+ E+R + +P + + + K ++ +R + NLG+ +AM
Sbjct: 712 KEAEAR---GNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE---QMDNLGHTPDIVTTNAM 765
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I +R+G IE + E + + N+++ Y K + + + SII G
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825
Query: 419 KPNSTSWETLAEGHIRERRILE-ALSCLKGAFAAEGAKSWR 458
P+ + +L G I E +LE L LK AF G + R
Sbjct: 826 LPDKLTCHSLVLG-ICESNMLEIGLKILK-AFICRGVEVDR 864
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 16/176 (9%)
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL-SLYGS 329
LM + N N + + + +Y++ G ++ + E R + + G + P Y ++ GS
Sbjct: 152 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMG--LYGFN--PSVYTCNAILGS 207
Query: 330 VGKKEEVYRVWN-----LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
V K E VW+ L R + P V ++ +I+ L G E + ++ KS
Sbjct: 208 VVKSGEDVSVWSFLKEMLKRKICPDVAT--FNILINVLCAEGSFEKSSYLMQKM--EKSG 263
Query: 385 YDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
Y P I N ++ WY K+G F A + + +G + ++ L R RI
Sbjct: 264 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319
>gi|242037347|ref|XP_002466068.1| hypothetical protein SORBIDRAFT_01g000640 [Sorghum bicolor]
gi|241919922|gb|EER93066.1| hypothetical protein SORBIDRAFT_01g000640 [Sorghum bicolor]
Length = 722
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 147/354 (41%), Gaps = 63/354 (17%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIA---------KVHGVASA 162
+K LR R++ HA ER L DA + LD I + A A
Sbjct: 199 ALKSLRAARQWPHA-----------ERLALDMLDAGVPLDNITYSTLITAARRCRQFAKA 247
Query: 163 EDFF---LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
++F + L D Y A+L+ Y + M+ L D+ R G+ + + V+
Sbjct: 248 VEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAK 307
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
++ + +Y+ ++ + EM E GI+ +++ YN L + G G +FE M V++ V+
Sbjct: 308 MFGEAGDYEGIQFVFKEMTEVGIKPNIFVYNALLEALGKTGKPGLARNLFEEM-VEQGVD 366
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
PN T + +A +Y GR R +G + ++
Sbjct: 367 PNARTLTALAKIY---------------------GRAR---------WG-----RDALQL 391
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA----NLMMS 395
W+ R + N+ + ++S A +G + E++F E + P+ M++
Sbjct: 392 WDKMRELKLPADNILCNTLLSMCADVGLVNEAEQLFNEMKDPECRDVPKPDKWSYTAMIN 451
Query: 396 WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAF 449
Y G+ D+A F +++ G +PN S+ + + + +RI +A+ L+
Sbjct: 452 IYGSNGDTDRALQLFGEMLKGGIEPNIMSYTIVIQCLGKAQRIQQAVEVLEAGL 505
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
+LD +N+ L S + E + L +D V + T+ST+ T + Q K
Sbjct: 188 AFQLDTIFFNVALKSLRAARQWPHAERL-ALDMLDAGVPLDNITYSTLITAARRCRQFAK 246
Query: 301 AEESLRRV-ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
A E R+ + D V Y +L +Y +G KEEV +++ R ++ + +
Sbjct: 247 AVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLA 306
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
GD EG++ +F+E V + + N ++ K G A F ++E+G
Sbjct: 307 KMFGEAGDYEGIQFVFKEMTEVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMVEQGVD 366
Query: 420 PNSTSWETLAEGHIRER 436
PN+ + LA+ + R R
Sbjct: 367 PNARTLTALAKIYGRAR 383
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 151/325 (46%), Gaps = 9/325 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAA--IQLDLIAKVHGVASAEDFFLSLP--DTLKDRR 177
+K AL+++ M +G L+ S+ + + LD + K A F++ + R
Sbjct: 349 FKEALKMFYMMEAKG----LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ + A +L+++M G + Y+ ++ + K+ + + +V +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G+ + Y+ + +C G ++ ++E M ++ ++T F+ + T K G+
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT-FNVLVTSLCKAGK 523
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
V +AEE +R + S + V + L++ YG+ G+ + + V++ V T Y +
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ L + G + EK + +V ++ D + N +++ K GN KA + F +++
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 418 GKPNSTSWETLAEGHIRERRILEAL 442
P+S ++ +L G R+ + + A+
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIAI 668
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 154/363 (42%), Gaps = 19/363 (5%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S+ ++ EK G + T V+ K R+K A+E+ D M ++G + + I
Sbjct: 212 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 271
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRD 204
DL + + +A +L L D K + Y L+N + A L+++M
Sbjct: 272 -DL-CRSNRIAKG---YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 326
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
G + + + +N ++ ++ + E M M+ KG+ SY + L +
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 386
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
G + MK + V T++ M K G +++A L + D V Y L+
Sbjct: 387 ARGFYMRMKRN-GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Query: 325 SLYGSVGK----KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
+ + VG+ KE V R++ + S P + Y +I + R+G ++ +I+E +
Sbjct: 446 NGFCKVGRFKTAKEIVCRIYRVGLS--P--NGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ D N++++ K G +AE F + +G PN+ S++ L G+ L+
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561
Query: 441 ALS 443
A S
Sbjct: 562 AFS 564
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 110/268 (41%), Gaps = 3/268 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+N + L+ KM GYA + YN ++ Y K + ++
Sbjct: 192 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 251
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MK KG+ DV +YN+ + K + M+ + ++PN T++T+ +
Sbjct: 252 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR-KRMIHPNEVTYNTLINGFSN 310
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+V A + L + S + V ++ L+ + S G +E +++ + + + +
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFNSI 413
Y ++ L + + + + + F + RI M+ K G D+A N +
Sbjct: 371 YGVLLDGLCKNAEFD-LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
++G P+ ++ L G + R A
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTA 457
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 134/353 (37%), Gaps = 47/353 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L+ Y+R M ++ + M G+ N ++ +K E V S + EM
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ I DV ++NI ++ ++GS EK + + M+ P T++T+ Y K G+
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKME-KSGYAPTIVTYNTVLHWYCKKGR 243
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ A E L ++S+ D Y+ L+ + + + + + L R +
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIH---DLCRSNRIAKGYLLLRDM----------- 289
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
R I E + N +++ + EG A N ++ G
Sbjct: 290 ------RKRMIHPNEVTY---------------NTLINGFSNEGKVLIASQLLNEMLSFG 328
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
PN ++ L +GHI E EAL F AK P V+ + ++
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALK----MFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384
Query: 478 GSKEAFVALLRQPG-------YRKEKDYMSLIGLTDEAVAENNKKNDEDSDED 523
F +++ G Y D + G DEAV N+ + + D D
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 159/401 (39%), Gaps = 51/401 (12%)
Query: 91 ASVLNDWEKGGRSLTKWEL-CRV---------------VKELRKFRRYKHALEVYDWMNN 134
++++N + K GR T E+ CR+ + + K A+ +Y+ M
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501
Query: 135 RG---ERFRLSASDAAIQLDLIAKVHGVASAEDFFLS------LPDTLKDRRVYGALLNA 185
G + F + + + + K VA AE+F LP+T+ + L+N
Sbjct: 502 EGHTRDHFTFN-----VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS----FDCLING 552
Query: 186 YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD 245
Y + A + D+M G+ Y ++ K E E + + +D
Sbjct: 553 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 612
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
YN L++ G+ K +F M V +++ P+ T++++ + + G+ A
Sbjct: 613 TVMYNTLLTAMCKSGNLAKAVSLFGEM-VQRSILPDSYTYTSLISGLCRKGKTVIAILFA 671
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY-------HAM 358
+ E+R + +P + + + K ++ +R + NLG+ +AM
Sbjct: 672 KEAEAR---GNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE---QMDNLGHTPDIVTTNAM 725
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I +R+G IE + E + + N+++ Y K + + + SII G
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 419 KPNSTSWETLAEGHIRERRILE-ALSCLKGAFAAEGAKSWR 458
P+ + +L G I E +LE L LK AF G + R
Sbjct: 786 LPDKLTCHSLVLG-ICESNMLEIGLKILK-AFICRGVEVDR 824
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 16/176 (9%)
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL-SLYGS 329
LM + N N + + + +Y++ G ++ + E R + + G + P Y ++ GS
Sbjct: 112 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMG--LYGFN--PSVYTCNAILGS 167
Query: 330 VGKKEEVYRVWN-----LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
V K E VW+ L R + P V ++ +I+ L G E + ++ KS
Sbjct: 168 VVKSGEDVSVWSFLKEMLKRKICPDVAT--FNILINVLCAEGSFEKSSYLMQKM--EKSG 223
Query: 385 YDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
Y P I N ++ WY K+G F A + + +G + ++ L R RI
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 131/288 (45%), Gaps = 25/288 (8%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LPD + + G+L Y + + A + D M KG YN+M+ Y
Sbjct: 321 LPDVVTLSMLMGSLCK-YGKIK---EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 376
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
++ + M GI D Y++N+ + + + G +K +F M+ D V P+ T+ T+
Sbjct: 377 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR-DHGVKPDVVTYRTV 435
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL---SLYGSVGKKEEVYRVWNLYRS 345
++G+++ A E ++ + D+ Y+ L+ +GS+ K +E+
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL--------- 486
Query: 346 VFPGVTNLGYH-------AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
+ N G H ++I++L ++G + + IF+ ++V D + +++M Y
Sbjct: 487 -ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYC 545
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G +KA F++++ G +PN + TL G+ + RI E LS +
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFR 593
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 169/402 (42%), Gaps = 29/402 (7%)
Query: 68 RPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKW-ELCRVVKELR--------- 117
R M K A R++ ++ L + N+ G S +W E RV KE+R
Sbjct: 268 RAMDKAEAFLRQM--VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 325
Query: 118 ----------KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF- 166
K+ + K A +V+D M +G+ + + + I L+ A + D F
Sbjct: 326 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN--IMLNGYATKGCLVDMTDLFD 383
Query: 167 LSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
L L D + D + L+ AY M A ++ ++MRD G + Y ++ +I
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM-EGVFELMKVDKAVNPNWTT 284
+ D+ ++M ++G+ D Y+YN + + GS K E + E+M + ++ +
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM--NNGMHLDIVF 501
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
FS++ K+G+V A+ + D V Y L+ Y VGK E+ RV++
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 561
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S + Y +++ +IG I+ +F E L + ++++ + G
Sbjct: 562 SAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV 621
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
A+ F+ + E G + ++ + G + R EA+ K
Sbjct: 622 PAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFK 663
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 128/293 (43%), Gaps = 10/293 (3%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGA--LLNAYVRARMRGNA-ELLIDKMR 203
AI +D + H A FF L T + A LL + A+ A ++L+ +
Sbjct: 115 AILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTP 174
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL--DVYSYNIWLSSCGSQGS 261
+ G Y++++ + + + ++ M E G +V +YN + +G
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 234
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
K +F+ M V + + P+ T++++ K ++KAE LR++ ++ + Y+
Sbjct: 235 VNKACDLFKEM-VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYN 293
Query: 322 YLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
L+ Y S G+ +E RV+ R S+ P V L ++ SL + G I+ +F+
Sbjct: 294 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM--LMGSLCKYGKIKEARDVFDTMA 351
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ D N+M++ Y +G F+ ++ +G P+ ++ L + +
Sbjct: 352 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 404
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++ +A A++ +M + G A+ YN+++ K + +DE + E+
Sbjct: 606 LYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 665
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +++++ + N + E+ + +F + + V P+ T+S M T IK G
Sbjct: 666 RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV-PSVVTYSIMITNLIKEGL 724
Query: 298 VEKAEE 303
VE+AE+
Sbjct: 725 VEEAED 730
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/304 (18%), Positives = 121/304 (39%), Gaps = 40/304 (13%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y L+ + A+ LI ++ + G + + ++ ++ K+ + +++
Sbjct: 463 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
G+ D Y++ + G EK VF+ M V + PN + T+ Y K
Sbjct: 523 DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM-VSAGIEPNVVVYCTLVNGYCK 581
Query: 295 MGQVEKAEESLRRVESR-----------------ITGRD---RVPYH------------- 321
+G++++ R + R GR +V +H
Sbjct: 582 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICT 641
Query: 322 YLLSLYGSVGKK--EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
Y + L G + +E ++ R++ + + + MI + + +E + +F
Sbjct: 642 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI- 700
Query: 380 SVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
+S P + ++M++ +KEG ++AE F+S+ G +PNS + +++
Sbjct: 701 -SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 759
Query: 438 ILEA 441
I+ A
Sbjct: 760 IVRA 763
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 8/268 (2%)
Query: 179 YGALLNAYVRARMRGN---AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
Y +L++ Y + GN ++L+ +M + G + ++ + V++ Y K +
Sbjct: 229 YNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFE 288
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EMK++GI V +YN +S S+G E+ + E M+ D ++PN TF + + K
Sbjct: 289 EMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME-DLGLSPNEITFGCVLKGFCKK 347
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNL 353
G + A + + + R D V Y+ L+ +Y +GK E+ V + + P VT
Sbjct: 348 GMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTT- 406
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ +I+ +R GD + +E D N+++ +G KA + +
Sbjct: 407 -YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEM 465
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
E G +PN ++ T+ +G + I A
Sbjct: 466 SEVGLEPNHLTYNTIIQGFCDKGNIKSA 493
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +Y L++ Y R +A + + M KG + + YN ++T + + ++ ++
Sbjct: 368 DVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EMKEKGI DV +YN+ + + +G K + + M + + PN T++T+ +
Sbjct: 428 DEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS-EVGLEPNHLTYNTIIQGFCD 486
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFP-GVT 351
G ++ A E R+E + V Y+ + + +GK +E + N L + + P G+T
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 94/227 (41%), Gaps = 10/227 (4%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+N +++ +I + + + ++K G+ V +YN + +G M V L+K
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLK 253
Query: 274 --VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
V+ ++P TF + Y K A ++ + V Y+ L+S S G
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS--VKSSYDPRI 389
K EE ++ + + + ++ + +GM +W+ + + +P +
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCK----KGMMADANDWIDGMTERNVEPDV 369
Query: 390 A--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
N+++ Y + G + A A ++ ++G PN T++ L G R
Sbjct: 370 VIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
V+P+ TF+T+ + ++GQ+ KA + + +++ Y+ L+ Y G +Y
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 338 RVWNLYRS-VFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
V L + V G+ T + + +I+ + + ++FEE + N ++
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
S EG ++ + + G PN ++ + +G ++ + +A
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADA 353
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 131/288 (45%), Gaps = 25/288 (8%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LPD + + G+L Y + + A + D M KG YN+M+ Y
Sbjct: 334 LPDVVTLSMLMGSLCK-YGKIK---EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 389
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
++ + M GI D Y++N+ + + + G +K +F M+ D V P+ T+ T+
Sbjct: 390 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR-DHGVKPDVVTYRTV 448
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL---SLYGSVGKKEEVYRVWNLYRS 345
++G+++ A E ++ + D+ Y+ L+ +GS+ K +E+
Sbjct: 449 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL--------- 499
Query: 346 VFPGVTNLGYH-------AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
+ N G H ++I++L ++G + + IF+ ++V D + +++M Y
Sbjct: 500 -ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYC 558
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G +KA F++++ G +PN + TL G+ + RI E LS +
Sbjct: 559 LVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFR 606
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 169/402 (42%), Gaps = 29/402 (7%)
Query: 68 RPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKW-ELCRVVKELR--------- 117
R M K A R++ ++ L + N+ G S +W E RV KE+R
Sbjct: 281 RAMDKAEAFLRQM--VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 338
Query: 118 ----------KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF- 166
K+ + K A +V+D M +G+ + + + I L+ A + D F
Sbjct: 339 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN--IMLNGYATKGCLVDMTDLFD 396
Query: 167 LSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
L L D + D + L+ AY M A ++ ++MRD G + Y ++ +I
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM-EGVFELMKVDKAVNPNWTT 284
+ D+ ++M ++G+ D Y+YN + + GS K E + E+M + ++ +
Sbjct: 457 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM--NNGMHLDIVF 514
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
FS++ K+G+V A+ + D V Y L+ Y VGK E+ RV++
Sbjct: 515 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 574
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S + Y +++ +IG I+ +F E L + ++++ + G
Sbjct: 575 SAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV 634
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
A+ F+ + E G + ++ + G + R EA+ K
Sbjct: 635 PAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFK 676
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 128/293 (43%), Gaps = 10/293 (3%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGA--LLNAYVRARMRGNA-ELLIDKMR 203
AI +D + H A FF L T + A LL + A+ A ++L+ +
Sbjct: 128 AILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTP 187
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL--DVYSYNIWLSSCGSQGS 261
+ G Y++++ + + + ++ M E G +V +YN + +G
Sbjct: 188 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 247
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
K +F+ M V + + P+ T++++ K ++KAE LR++ ++ + Y+
Sbjct: 248 VNKACDLFKEM-VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYN 306
Query: 322 YLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
L+ Y S G+ +E RV+ R S+ P V L ++ SL + G I+ +F+
Sbjct: 307 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM--LMGSLCKYGKIKEARDVFDTMA 364
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ D N+M++ Y +G F+ ++ +G P+ ++ L + +
Sbjct: 365 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 417
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++ +A A++ +M + G A+ YN+++ K + +DE + E+
Sbjct: 619 LYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 678
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +++++ + N + E+ + +F + + V PN T+S M T IK G
Sbjct: 679 RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV-PNVVTYSIMITNLIKEGL 737
Query: 298 VEKAEE 303
VE+AE+
Sbjct: 738 VEEAED 743
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/304 (16%), Positives = 116/304 (38%), Gaps = 40/304 (13%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y L+ + A+ LI ++ + G + + ++ ++ K+ + +++
Sbjct: 476 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 535
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
G+ D Y++ + G EK VF+ M V + PN + T+ Y K
Sbjct: 536 DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM-VSAGIEPNVVVYCTLVNGYCK 594
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK--------------------- 333
+G++++ R + R + Y ++ G+
Sbjct: 595 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICT 654
Query: 334 --------------EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
+E ++ R++ + + + MI + + +E + +F
Sbjct: 655 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI- 713
Query: 380 SVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
+S P + ++M++ +KEG ++AE F+S+ G +PNS + +++
Sbjct: 714 -SRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 772
Query: 438 ILEA 441
I+ A
Sbjct: 773 IVRA 776
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 150/321 (46%), Gaps = 25/321 (7%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++A + + +A L+++MR+KG + +N+++ + + +E +
Sbjct: 349 DVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRL 408
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMY 292
M E+G+ DV +YN + + G+ K F LM V + + T +T+
Sbjct: 409 EMMTEEGLTPDVITYNTLIDASCKAGNVAK---AFVLMDEMVRSGLKMDTFTLNTLLYNL 465
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGV 350
K + E+AEE LR R D V Y +++ Y K E +W+ + R + P +
Sbjct: 466 CKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSI 525
Query: 351 TNLGYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y+ +I L+ +G + E ++K+ E + + D N+++ Y KEG+ +KA F
Sbjct: 526 ST--YNTLIKGLSTMGKLTEAIDKL-NELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQF 582
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSW--RPKPVNVINF 467
N ++E KP+ + TL G R+ +A+ +SW + K V+VI +
Sbjct: 583 HNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLF---------ESWVEKGKKVDVITY 633
Query: 468 ---FKACEEESDMGSKEAFVA 485
+A +++D+ + F A
Sbjct: 634 NTLIQALCKDNDVDTALRFFA 654
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 117/269 (43%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++A +A A +L+D+M G + + N ++ K K Y+E E ++
Sbjct: 419 DVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELL 478
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++G D SY +++ + E +++ M + + + P+ +T++T+
Sbjct: 479 RAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEM-IKRKLTPSISTYNTLIKGLST 537
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
MG++ +A + L + D Y+ ++ Y G E+ ++ N + S P V
Sbjct: 538 MGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVT 597
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ +++ L G +E K+FE W+ D N ++ K+ + D A FF
Sbjct: 598 C--NTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFAD 655
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ G +P+ ++ L R +EA
Sbjct: 656 MEVRGLQPDVFTYNVLLSALSEAGRSVEA 684
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 116/273 (42%), Gaps = 5/273 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y LLNA+ R M G A L+ +M+ +G YN +++ Y ++ + +V
Sbjct: 243 DAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVV 302
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M G D+++YN+ + G ++ + + M+ V+P+ T++T+ K
Sbjct: 303 EAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFK 362
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
+ A L + + V ++ ++ G+ EE + + P V
Sbjct: 363 CQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDV-- 420
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+ +I + + G++ + +E + D N ++ KE +++AE +
Sbjct: 421 ITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRA 480
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ G P+ S+ T+ + +E + AL CL
Sbjct: 481 PPQRGFVPDEVSYGTVMAAYFKEYKPEPAL-CL 512
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 125/303 (41%), Gaps = 24/303 (7%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ L++ + +A + KM+ G + ++ YN ++ + + E ++++ M
Sbjct: 211 TFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARM 270
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K++GI +YN +S+ G ++ V E M P+ T++ +A + G+
Sbjct: 271 KKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTA-FGFEPDLWTYNVLAAGLCQAGK 329
Query: 298 VEKAEESLRRVESR-ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
V++A + +E I D V Y+ L+ + + + R + + ++
Sbjct: 330 VDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHN 389
Query: 357 AMISSLARIGDIEG----MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
++ L R G +E +E + EE L+ D N ++ K GN KA +
Sbjct: 390 IIVKGLCREGQLEEALGRLEMMTEEGLTP----DVITYNTLIDASCKAGNVAKAFVLMDE 445
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLK--------------GAFAAEGAKSWR 458
++ G K ++ + TL +E+R EA L+ G A K ++
Sbjct: 446 MVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYK 505
Query: 459 PKP 461
P+P
Sbjct: 506 PEP 508
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 13/229 (5%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AE L+ +G+ + Y +M Y K + + + EM ++ + + +YN +
Sbjct: 474 AEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIK 533
Query: 255 SCGSQGS-TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+ G TE ++ + ELM++ + P+ TT++ + Y K G +EKA + ++
Sbjct: 534 GLSTMGKLTEAIDKLNELMEM--GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSF 591
Query: 314 GRDRVPYHYL---LSLYGSVGKKEEVYRVWNLYRSVFPG--VTNLGYHAMISSLARIGDI 368
D V + L L LYG + K +++ W V G V + Y+ +I +L + D+
Sbjct: 592 KPDVVTCNTLMNGLCLYGRLEKAMKLFESW-----VEKGKKVDVITYNTLIQALCKDNDV 646
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+ + F + D N+++S + G +A+ + + E G
Sbjct: 647 DTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG 695
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 128/306 (41%), Gaps = 47/306 (15%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D YG ++ AY + A L D+M + YN ++ + + E
Sbjct: 487 VPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAID 546
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
++E+ E G+ D +YNI + + +G EK M V+ + P+ T +T+
Sbjct: 547 KLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKM-VENSFKPDVVTCNTLMNGL 605
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVF 347
G++EKA ++ ES + +V +L ++ K +V + R +
Sbjct: 606 CLYGRLEKA---MKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQ 662
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEE------------WLSVKSSY-------DPR 388
P V Y+ ++S+L+ G +K+ + + S+KSS DP
Sbjct: 663 PDV--FTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPE 720
Query: 389 IANLMMSW-------------YVKE----GNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+ + + S Y+KE G +A+A + ++++G +++++ TL EG
Sbjct: 721 VKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEG 780
Query: 432 HIRERR 437
I+ ++
Sbjct: 781 LIKRQK 786
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 105/239 (43%), Gaps = 11/239 (4%)
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKG-IRLDVYSYNIWLSSCGSQGSTE---KMEGVFE 270
+ ++ Y +++ ++ + +G +R + + N LS+ ST ++
Sbjct: 140 DAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHS 199
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
L+ + ++PN TF+ + + G + A +L +++ D V Y+ LL+ +
Sbjct: 200 LIALR--LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRK 257
Query: 331 GKKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
G E + L R G+ T Y+ ++S+ AR+G I+ + E + D
Sbjct: 258 GMLGEARTL--LARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLW 315
Query: 389 IANLMMSWYVKEGNFDKAEAFFNSIIEEG-GKPNSTSWETLAEGHIRERRILEALSCLK 446
N++ + + G D+A + + + G P+ ++ TL + + +R +AL+ L+
Sbjct: 316 TYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLE 374
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 2/267 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V+ +L YV + NA + D M G N ++ +K E + +M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
GI DV+ +I +++ G ++ G + M+ + V PN T+ ++ Y+ +G
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGYVSLGD 276
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN-LGYH 356
VE A+ L+ + + R+ V Y L+ Y K +E +V + V + Y
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I R G I+ ++ +E L + + I N +++ Y K G +AE +++
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396
Query: 417 GGKPNSTSWETLAEGHIRERRILEALS 443
KP+S S+ TL +G+ RE EA +
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFN 423
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 7/271 (2%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D R YG L++ Y R +A L+D+M G + N ++ Y K E E E
Sbjct: 329 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+++ M + ++ D YSYN L +G T + + + M + + + P T++T+
Sbjct: 389 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM-LQEGIEPTVLTYNTLLKGL 447
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP-GVT 351
++G + A + + D V Y LL + K E L++ + G T
Sbjct: 448 CRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLD---GLFKMENFEGASTLWKDILARGFT 504
Query: 352 N--LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ ++ MIS L ++G + E+IF++ + S D ++ Y K N +A
Sbjct: 505 KSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 564
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
++ E P+ + +L G + RR++E
Sbjct: 565 KGAMEREXISPSIEMYNSLISGLFKSRRLVE 595
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 125/281 (44%), Gaps = 20/281 (7%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGAL++ + + M A +M + G + + + + M++ ++ DE ++ +M
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G D + +L S + +K+ + + PN ++ K G+V
Sbjct: 675 DHGFFPD---HECFLKSDIRYAAIQKIADSLD-ESCKTFLLPNNIVYNIAIAGLCKTGKV 730
Query: 299 EKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+ A RR S ++ + VP Y L+ Y + G +E +R+ + L R + P +
Sbjct: 731 DDA----RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFF 410
Y+A+I+ L + +++ +++F + L K + P + N ++ Y K GN D A
Sbjct: 787 --YNALINGLCKSENVDRAQRLFHK-LHQKGLF-PNVVTYNTLIDGYCKIGNMDAAFKLK 842
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
+ +IEEG P+ ++ L G + I ++ L A
Sbjct: 843 DKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/375 (18%), Positives = 155/375 (41%), Gaps = 27/375 (7%)
Query: 71 IKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYD 130
+ ++ + L M+N + G++++ D G + ++ ++ L K + A E++D
Sbjct: 473 VGYSTLLDGLFKMENFE-GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 531
Query: 131 WMNNRG-------ERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALL 183
M + G R + A + KV G E S+ +Y +L+
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSI-------EMYNSLI 584
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR 243
+ ++R L+ +M +G + + Y ++ + K D+ S EM E G+
Sbjct: 585 SGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 644
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
++ + +S G ++ + + M VD P+ F I+ ++K +
Sbjct: 645 ANIIICSTMVSGLYRLGRIDEANLLMQKM-VDHGFFPDHECFLKSD---IRYAAIQKIAD 700
Query: 304 SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISS 361
SL + + Y+ ++ GK ++ R +++ + P N Y +I
Sbjct: 701 SLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP--DNFTYCTLIHG 758
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ G+++ ++ +E L + P I N +++ K N D+A+ F+ + ++G
Sbjct: 759 YSAAGNVDEAFRLRDEML--RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLF 816
Query: 420 PNSTSWETLAEGHIR 434
PN ++ TL +G+ +
Sbjct: 817 PNVVTYNTLIDGYCK 831
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDA-AIQLDLIAKVHGVASAEDFF--LSLPDTLKDRR 177
RY ++ D ++ + F L + I + + K V A FF LSL + D
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++ Y A A L D+M +G + + YN ++ K + D + + ++
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKM 295
+KG+ +V +YN + G+ M+ F+L +++ ++P+ T+S + K
Sbjct: 811 HQKGLFPNVVTYNTLIDGYCKIGN---MDAAFKLKDKMIEEGISPSVVTYSALINGLCKH 867
Query: 296 GQVEKAEESLRRV 308
G +E++ + L ++
Sbjct: 868 GDIERSMKLLNQM 880
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 126/329 (38%), Gaps = 34/329 (10%)
Query: 140 RLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL----------------------KDRR 177
R+ A D A+Q+ + GVA E + +L D L K R
Sbjct: 449 RVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI 508
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ +++ + AE + DKM+D G + + Y ++ Y K + + M
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ + I + YN +S + + M + + + PN T+ + + K G
Sbjct: 569 EREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGI-RGLTPNIVTYGALIDGWCKEGM 627
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
++KA S + + + ++S +G+ +E + + FP +
Sbjct: 628 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP-----DH 682
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR--IANLMMSWYVKEGNFDKAEAFFNSI 413
+ S R I+ + +E S K+ P + N+ ++ K G D A FF+ +
Sbjct: 683 ECFLKSDIRYAAIQKIADSLDE--SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 740
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
+G P++ ++ TL G+ + EA
Sbjct: 741 SLKGFVPDNFTYCTLIHGYSAAGNVDEAF 769
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 170/382 (44%), Gaps = 44/382 (11%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
A VL+D + +T + C VVK + + ++ ALEVY+W+N R + +A A L
Sbjct: 141 ADVLDDRKV---QMTPTDFCFVVKWVGQ-SSWQRALEVYEWLNLR-HWYSPNARMLATIL 195
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
++ K + A A + F + +VY A++ Y R + L+D MR +G
Sbjct: 196 SVLGKANQEALAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEP 255
Query: 210 HSLPYNVMMTLYMKIKEY--DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ +N ++ +K + +++E++ GI+ D+ +YN +S+C + + E+
Sbjct: 256 DLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVK 315
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR------IT-------- 313
V+ M V P+ T++ M ++Y + G +A + +ES+ +T
Sbjct: 316 VYNDM-VAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAF 374
Query: 314 ---------------------GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G+D + Y+ ++ +YG G+ + +++++ +
Sbjct: 375 AREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDA 434
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y +I SL + I+ ++ E L+ + R + ++ Y K G +AE F+
Sbjct: 435 VTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDC 494
Query: 413 IIEEGGKPNSTSWETLAEGHIR 434
++ G KP+ ++ + + +R
Sbjct: 495 MLRSGIKPDHLAYSVMLDILLR 516
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 123/294 (41%), Gaps = 15/294 (5%)
Query: 164 DFFLSLPDTLKDRRVYG---------ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPY 214
+ F D R YG +++ Y + A LID+ +KG +
Sbjct: 690 ELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSI 749
Query: 215 NV-MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+ ++ Y K+K + + ES+V +++K +D +N + + + G E+ +F M
Sbjct: 750 HTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMM 809
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D +P + + + I G++++ ++ ++ + +L + G
Sbjct: 810 RD-GPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNI 868
Query: 334 EEVYRVWNLYRSV--FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
EV +++ ++ FP T Y MI LA+ + +E + E + D I N
Sbjct: 869 FEVKKIYQGMKAAGYFP--TMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWN 926
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
++ Y G+F K + I E G KP+ ++ TL + R+RR E LS +
Sbjct: 927 SVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLM 980
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 121/291 (41%), Gaps = 34/291 (11%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
T+ DR+V+ AL++AY + A + + M G + N +M + DE+
Sbjct: 778 TMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELY 837
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK------------------ 273
++ E+++ G ++ S + L + G+ +++ +++ MK
Sbjct: 838 VVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLL 897
Query: 274 --------VDKAVN--------PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
V+ V+ P+ + ++++ +Y +G +K + + ++ D
Sbjct: 898 AKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDE 957
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y+ L+ +Y + EE + + R V Y ++IS+ ++ +E E++FE
Sbjct: 958 DTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEG 1017
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
LS + D ++MM + GN KAE + E G +P + L
Sbjct: 1018 LLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLL 1068
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 130/315 (41%), Gaps = 11/315 (3%)
Query: 139 FRLSASDAAIQLDLIAKVHGVASAEDFFLSLP-----DTLKDRRVYGALLNAYVRARMRG 193
F++S S + LD A + + + + T+ R+ LL R R
Sbjct: 848 FKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVR--- 904
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN-IW 252
+ E ++ +M + +N ++ LY I ++ + + ++E G++ D +YN +
Sbjct: 905 DVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLI 964
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
L C + E + + E+ +V + P T+ ++ + + K+ VE+AEE + S+
Sbjct: 965 LMYCRDRRPEEGLSLMHEMRRV--GLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKE 1022
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
DR YH ++ ++ + G + ++ + + T H ++ S + G E E
Sbjct: 1023 CKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAE 1082
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
K+ + + ++ Y+K G+ + A + ++G +P+ W
Sbjct: 1083 KVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAA 1142
Query: 433 IRERRILEALSCLKG 447
+ EA+ LK
Sbjct: 1143 SLSQHTSEAIVLLKA 1157
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 113/275 (41%), Gaps = 17/275 (6%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y +LL A+ R + + + M G+ + YN ++ +Y K ++D
Sbjct: 361 LPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQ 420
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ S+MK G D +Y + + S G ++ V M ++ V P TFS + Y
Sbjct: 421 LYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEM-LNARVKPTLRTFSALICGY 479
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL---YGSVGKKEEVYRVWNLYRSVFPG 349
K G+ +AEE+ + D + Y +L + + GK ++Y+ L+ S P
Sbjct: 480 AKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLH-SFKP- 537
Query: 350 VTNLGYHAMISSLA---RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
+ Y M+ L R D+ + K EE + S ++ S VK FD A
Sbjct: 538 -DHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNS-------QVICSILVKGECFDHA 589
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
I +G + + + ++ + R LEA
Sbjct: 590 ANMLRLAISQGCELDRENLLSILGSYGSSGRHLEA 624
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 92/214 (42%), Gaps = 5/214 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A+++ Y R M A L + KG+ ++ YN ++ + + D+V+ +
Sbjct: 328 DLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEIC 387
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M + G D +YN + G +G + ++ MK+ +P+ T++ + K
Sbjct: 388 EDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKL-SGRSPDAVTYTVLIDSLGK 446
Query: 295 MGQVEKAEESLRR-VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+++A E + + +R+ R + L+ Y GK+ E ++ +L
Sbjct: 447 ANMIKEAAEVMSEMLNARVKPTLRT-FSALICGYAKAGKRVEAEETFDCMLRSGIKPDHL 505
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
Y M+ L R + K+++E V S+ P
Sbjct: 506 AYSVMLDILLRFNESGKAMKLYQEM--VLHSFKP 537
>gi|302804432|ref|XP_002983968.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
gi|300148320|gb|EFJ14980.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
Length = 598
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 161/359 (44%), Gaps = 24/359 (6%)
Query: 84 DNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSA 143
D P AS +N G +K + ++++L K ++YK AL+ + F +
Sbjct: 79 DVPGHRVASYINWLVDMGEIDSKPMVLSIIRKLTKRQKYKTALD---------KAFEIDD 129
Query: 144 SDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
D +Q+D A V + AE F LPD K Y +L YVR RM A +++DK+R
Sbjct: 130 RDYVLQVDYYAHV-DMYLAEMAFNRLPDDKKTEEAYNYILAGYVRNRMLEKAVVVMDKIR 188
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
+ G V + M L+ + + ++V E + G+ + N L G
Sbjct: 189 ELG-LVSAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIKRRHGDLS 247
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI-TGR---DRVP 319
ME + E +++ N W T+ +A+ YI+ G EKA +L E+ I GR R
Sbjct: 248 GMEEIVEELELMGRSNA-W-TYIFIASAYIQAGFPEKAHAALGAAEAGIRNGRFKKQRKV 305
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW- 378
Y+ +L LYG + E + RVW + S P V + MI +L G+I E+IFEE
Sbjct: 306 YNKILLLYGLLKDMEGIERVWGILNSR-PLVAVHNHLFMIEALGSAGNIGRAEEIFEELR 364
Query: 379 --LSVKSSYDPRIANLMMSWYVKEGNFDKA-EAFFNSIIEEGGKPNSTSWETLAEGHIR 434
V+ Y I +M Y K G DKA E ++ + +P + +G+I+
Sbjct: 365 KCRGVRKEYRQFI--VMAGAYTKNGLMDKATEVLYDYPAKYKARPVPELYHYFIKGYIK 421
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 11/277 (3%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD---KGYAVHSLPYNVMMTLYMKIK 225
+PDT+ Y ++ Y +A G + ++K RD K + Y ++ +
Sbjct: 252 VPDTV----TYNIMIKGYCKA---GKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSER 304
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++D S+ EM+E+G+ + +SY++ + Q + VFE M K N +
Sbjct: 305 DFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMN-QKGCRANVAIY 363
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ + Y K G +E+A R+++ D V Y L++ G+ ++ +++ R+
Sbjct: 364 TALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRN 423
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ + Y ++I L + G IE E +FEE + D N ++ K G D+
Sbjct: 424 KGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQ 483
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
A A F + EEG ++ L +G +E + EA+
Sbjct: 484 ALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAI 520
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 1/242 (0%)
Query: 197 LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
L+ +++D+G + N ++ + + +E+ + MKE GI +Y+YN ++
Sbjct: 171 LVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGL 230
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
+ E E VFE+M K V P+ T++ M Y K G+++KA E R +E + D
Sbjct: 231 VNSMFIESAEKVFEVMDGGKIV-PDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPD 289
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
++ Y L+ S + ++ + Y +I L + +FE
Sbjct: 290 KITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFE 349
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ I ++ Y K G+ ++A F + EG +P++ ++ L G +
Sbjct: 350 TMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSG 409
Query: 437 RI 438
R+
Sbjct: 410 RL 411
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%)
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
L+ +G++G EE+ VW + + Y+ +++ L IE EK+FE K
Sbjct: 191 LIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGK 250
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
D N+M+ Y K G KA F + + KP+ ++ TL + ER L
Sbjct: 251 IVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCL 310
Query: 443 S 443
S
Sbjct: 311 S 311
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 115/253 (45%), Gaps = 4/253 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG L+N V+ R + L+ M ++GY ++ Y+V+++ K + +E ++ +M
Sbjct: 330 YGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMA 389
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG R ++ Y+ + +G + + + M + PN T+S++ + K G
Sbjct: 390 EKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGM-ISSGCLPNVYTYSSLMKGFFKTGLS 448
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
E+A + R ++ R+ Y L+ VG+ +E VW+ ++ + Y +M
Sbjct: 449 EEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSM 508
Query: 359 ISSLARIGDIEGMEKIFEEWLS---VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
I L IG ++ K++ E L KS D N+++ + + +A N +++
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLD 568
Query: 416 EGGKPNSTSWETL 428
G P+ + T
Sbjct: 569 RGCDPDVITCNTF 581
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 135/327 (41%), Gaps = 9/327 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDL--IAKVHGVASAEDFFLSLPD--TLKDRR 177
Y LE YD++ N +S + + L + + K+ V A + F +P+ L D
Sbjct: 164 YHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGY 223
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++ + A LL+D+M+ +G + + YNV++ K + V +V M
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNM 283
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG + +YN + +G +K + E M K + PN T+ T+ +K +
Sbjct: 284 FLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI-PNDVTYGTLINGLVKQRR 342
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGY 355
L +E R ++ Y L+S GK EE +W + P + + Y
Sbjct: 343 AMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNI--VVY 400
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
A+I L R G ++I +S + + +M + K G ++A + + E
Sbjct: 401 SAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDE 460
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
G N + L +G R+ EA+
Sbjct: 461 TGCSRNEFCYSVLIDGLCGVGRVKEAM 487
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 138/306 (45%), Gaps = 11/306 (3%)
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRG 193
G+ ++ +I L+ + K V AE+ SL + + +Y ++N Y +
Sbjct: 235 GKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMD 294
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
A L I++M +G + + +N ++ + +++ D+ E V +M KGI V +YNI +
Sbjct: 295 RAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILI 354
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
G + + E M+ + PN ++ ++ K G++ +AE LR +
Sbjct: 355 DGYGRLCVFSRCFQILEEME-ENGEKPNVISYGSLINCLCKDGKILEAEMVLR----DMV 409
Query: 314 GRDRVP----YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
GR +P Y+ L+ +VGK E R ++ G T + Y+++I L ++G ++
Sbjct: 410 GRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLK 469
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
E++F S D N ++S Y GN K + ++ + G KP ++ L
Sbjct: 470 EAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLI 529
Query: 430 EGHIRE 435
G +E
Sbjct: 530 SGCSKE 535
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 146/319 (45%), Gaps = 6/319 (1%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGAL 182
A+ + M +RG R A ++ I D ++ + AE++ + Y L
Sbjct: 296 AILTIEQMESRGLRPNCIAFNSVI--DKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNIL 353
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
++ Y R + ++++M + G + + Y ++ K + E E ++ +M +G+
Sbjct: 354 IDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGV 413
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
+ YN+ + + G + F+ M + T++++ KMG++++AE
Sbjct: 414 LPNANIYNMLIDGSCTVGKLREALRFFDEMS-KNGIGATIVTYNSLIKGLCKMGKLKEAE 472
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
E + S D + Y+ L+S Y + G ++ ++ + + T +H +IS
Sbjct: 473 EMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGC 532
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
++ G I+ E +F E L + S D + N M+ Y + G+ KA + +++ G +P++
Sbjct: 533 SKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDN 591
Query: 423 TSWETLAEGHIRERRILEA 441
++ +L GH++E ++ E
Sbjct: 592 KTYNSLILGHLKEGKLSET 610
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 141/332 (42%), Gaps = 16/332 (4%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKD 175
K K A+E+++ M R + + + + + K + AE F +S+ + + +
Sbjct: 78 KLGDLKLAMELFETMKRR--KVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPN 135
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
R + L++ Y +A A L ++M+ + + +N +++ K + +E M++
Sbjct: 136 RVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLN 195
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYI 293
E+K G D ++Y+I G S + +L + + K V + T S +
Sbjct: 196 EIKCNGFVPDGFTYSIIFD--GLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLC 253
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G+VEKAEE L+ + V Y+ +++ Y +G + S +
Sbjct: 254 KEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCI 313
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLS--VKSSYDPRIA--NLMMSWYVKEGNFDKAEAF 409
++++I + I+ E EW+ V P + N+++ Y + F +
Sbjct: 314 AFNSVIDKFCEMQMIDKAE----EWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQI 369
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ E G KPN S+ +L ++ +ILEA
Sbjct: 370 LEEMEENGEKPNVISYGSLINCLCKDGKILEA 401
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 134/295 (45%), Gaps = 18/295 (6%)
Query: 160 ASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
A D + L + +K +V + +LL+ +AR A ++++++ G+
Sbjct: 149 AGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFT 208
Query: 214 YNVMMTLYMKIKE-YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
Y+++ +K + + E KG+++D Y+ +I L+ +G EK E V + +
Sbjct: 209 YSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSL 268
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS--- 329
V+ + P ++T+ Y ++G +++A ++ ++ESR + + ++ ++ +
Sbjct: 269 -VEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQM 327
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+ K EE + + + + P V Y+ +I R+ +I EE ++ P +
Sbjct: 328 IDKAEEWVKKM-VGKGIAPSVET--YNILIDGYGRLCVFSRCFQILEEM--EENGEKPNV 382
Query: 390 ANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ +++ K+G +AE ++ G PN+ + L +G ++ EAL
Sbjct: 383 ISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREAL 437
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 105/257 (40%), Gaps = 8/257 (3%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
++ + V ++ N L +M G+ L Y M +K+ + + MK +
Sbjct: 37 IVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRK 96
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ +V+ YN+ + + E +F M V V PN TF+T+ Y K G+V+ A
Sbjct: 97 VVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV-PNRVTFNTLIDGYCKAGEVDVA 155
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS---VFPGVTNLGYHAM 358
R++ + ++ LLS + EE + N + V G T Y +
Sbjct: 156 IGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFT---YSII 212
Query: 359 ISSLARIGDIEGME-KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
L + D G ++ E + D +++++ KEG +KAE S++E G
Sbjct: 213 FDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHG 272
Query: 418 GKPNSTSWETLAEGHIR 434
P + T+ G+ +
Sbjct: 273 LVPGEVIYNTIVNGYCQ 289
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 112/259 (43%), Gaps = 6/259 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ VYG + A V+ A L + M+ + + YNV++ K K + E +
Sbjct: 65 DKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLF 124
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM + + + ++N + G + G+ E MK +K V P+ TF+++ + K
Sbjct: 125 GEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEK-VEPSIITFNSLLSGLCK 183
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR-SVFPGV--T 351
++E+A L ++ D Y + G + + +LYR ++ GV
Sbjct: 184 ARRIEEARCMLNEIKCNGFVPDGFTYSIIFD--GLLKSDDGAGAALDLYREAIGKGVKID 241
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
N +++ L + G +E E++ + + I N +++ Y + G+ D+A
Sbjct: 242 NYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIE 301
Query: 412 SIIEEGGKPNSTSWETLAE 430
+ G +PN ++ ++ +
Sbjct: 302 QMESRGLRPNCIAFNSVID 320
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 111/272 (40%), Gaps = 2/272 (0%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L + +Y L++ A D+M G + YN ++ K+ + E E
Sbjct: 413 VLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAE 472
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
M + G DV +YN +S + G+++K ++E MK + P TF + +
Sbjct: 473 EMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMK-KLGLKPTINTFHPLISG 531
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
K G ++ E + DRV Y+ ++ Y G ++ + + +
Sbjct: 532 CSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPD 590
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
N Y+++I + G + + + ++ + + +L++ + +F+ A ++
Sbjct: 591 NKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYR 650
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
++E G PN L+ G ++ R+ EA S
Sbjct: 651 EMLENGFLPNVCICNELSTGLRKDGRLQEAQS 682
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 140/324 (43%), Gaps = 8/324 (2%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQL---DLIAKVHGVASAEDFFLSLPDTLKDRRVY 179
K + + + MN +G ++ L S + I++ + + K + +E +P + +Y
Sbjct: 325 KDSWKFFQRMNRKGVKWSLGVSASLIKIFCDEGMKKEALIFQSEMEKRGIPS---NTSIY 381
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
++N Y + AE L +M++KG + YN++M Y + + + VES++ EM +
Sbjct: 382 NTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHD 441
Query: 240 KGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G + + SYN +S+ G Q +EK E F MK + ++++++ Y GQ
Sbjct: 442 LGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMK-KGGIKATSSSYTSLICAYAVSGQY 500
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
EKA + ++ Y LL ++ G E++ W G T + +H +
Sbjct: 501 EKAHIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMV 560
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ LA+ G + E+ + N++M+ Y K G K +
Sbjct: 561 LDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLEL 620
Query: 419 KPNSTSWETLAEGHIRERRILEAL 442
KP+S ++ TL + R R A
Sbjct: 621 KPDSVTYSTLIYAYARVRDFSRAF 644
>gi|297847014|ref|XP_002891388.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
gi|297337230|gb|EFH67647.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Query: 97 WEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKV 156
W + G + + V+K F + ALE +WM + + F + + D A +L L+ V
Sbjct: 44 WSEQGDQVKPSYVRGVIKNFHDFNQCSKALEASEWMCEQ-KFFNIFSEDYAARLHLVETV 102
Query: 157 HGVASAEDFFLSLPDTLKDRRVYGALLNAYVRA-RMRGNAELLIDKMRDKGYAVHSLPYN 215
G+ AE FF S+P+ ++D VY LL +Y ++ + AE +KMRD G+ + P+N
Sbjct: 103 LGLEEAEKFFESIPENMRDYSVYDNLLRSYTKSEKTLDKAEATFEKMRDLGFLLKPSPFN 162
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYS-YNIW--LSSC 256
M++LY +K+ D V+ + EM E +R D + N+ LS+C
Sbjct: 163 SMISLYRHLKKKDMVKKLEREMMENDVRFDSHKELNVLTILSTC 206
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
K + + S Y + L + +E E + E VY N+ S S+ + +K
Sbjct: 83 KFFNIFSEDYAARLHLVETVLGLEEAEKFFESIPENMRDYSVYD-NLLRSYTKSEKTLDK 141
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD-RVPYHYL 323
E FE M+ D + F++M ++Y + K ++ ++++E + D R H
Sbjct: 142 AEATFEKMR-DLGFLLKPSPFNSMISLYRHL----KKKDMVKKLEREMMENDVRFDSHKE 196
Query: 324 LSLYGSVGK-KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
L++ + K+ +Y VWN Y +T+ Y + IS L ++ D++G EK++EEW V
Sbjct: 197 LNVLTILSTCKDSMYSVWN-YIKKRGKMTDEEYRSRISYLLKLDDVQGAEKLYEEWKPVG 255
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
D I +L++S + +EGN K E +SI
Sbjct: 256 PKLDMSIPSLLISRFCEEGNGSKVEELVDSI 286
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 130/305 (42%), Gaps = 42/305 (13%)
Query: 160 ASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK-------------- 205
A AED FL +V+ A++ Y R+ +A L+D MRD+
Sbjct: 205 ALAEDVFLRFAREGATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLIN 264
Query: 206 -----------------------GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
G ++ YN +++ + D+ ++ EM
Sbjct: 265 ARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASEC 324
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
R D+++YN +S G G ++ E +F+ + V+K P+ T++++ + K G VE+ E
Sbjct: 325 RPDLWTYNAMVSVHGRCGKAQEAELMFKEL-VEKGFQPDAVTYNSLLYAFAKEGDVERVE 383
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
+ +D + Y+ ++ +YG +G+ + +++ R++ + Y ++ SL
Sbjct: 384 RVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSL 443
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
++ I K+ EE + P + ++ Y K G D AE F+ ++E G KP
Sbjct: 444 GKMDRISEAGKVLEEM--ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKP 501
Query: 421 NSTSW 425
+ ++
Sbjct: 502 DRLAY 506
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 101/243 (41%), Gaps = 47/243 (19%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A+++ + R AEL+ ++ +KG+ ++ YN ++ + K + + VE + E+
Sbjct: 330 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 389
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK------------------------ 273
+ G R D +YN + G G + G+++ M+
Sbjct: 390 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRI 449
Query: 274 ----------VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
D + P TFS + Y K G+ + AE + R+ DR+ Y +
Sbjct: 450 SEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVM 509
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPG---VTNLGYHAMISSLARI-------GDIEGMEK 373
L ++ + +E ++ LYR++ + Y ++++LA+ G I+ ME
Sbjct: 510 LDVF---ARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEA 566
Query: 374 IFE 376
+FE
Sbjct: 567 VFE 569
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL A +A++ A+LL ++MR KGY ++ Y++MM +Y + + + E ++S MK
Sbjct: 995 YKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMK 1054
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E GI + + +I ++S G+ G ++ E V +K + + +ST+ Y++
Sbjct: 1055 EDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSN-LEISTLPYSTVLDAYLR 1109
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 4/230 (1%)
Query: 217 MMTLYMKIKEYDEVESMVSEMK-EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
M+ Y K+K + + E+ V +K E G+ D +N + + G E +F++M +
Sbjct: 754 MIEAYGKLKLWQQAENFVKGLKQESGV--DRRIWNALIHAYAESGLYEHARAIFDIM-IK 810
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
K P + + M I G++++ ++ ++ + +L + G E
Sbjct: 811 KGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFE 870
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMS 395
V +++N ++ Y MIS L +E + E D + N ++
Sbjct: 871 VMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLL 930
Query: 396 WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
Y GNFD+ ++SI+E G +P+ ++ TL + R R E + L
Sbjct: 931 MYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLL 980
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 112/257 (43%), Gaps = 5/257 (1%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
+L A+ +A + + M+ GY + Y +M++L K + +VE MV+EM+ G
Sbjct: 858 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAG 917
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ D+ N L G+ ++ V+ + ++ + P+ T++T+ MY + + E+
Sbjct: 918 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSI-LEAGLEPDEDTYNTLIVMYSRNFRPEEG 976
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
L + R Y LL+ G E+ ++ R+ + YH M+
Sbjct: 977 FTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKI 1036
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ E + + +P IA +++M+ Y G+ D+AE NS+ +
Sbjct: 1037 YRNARNHSKAEHLLSAM--KEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLE 1094
Query: 420 PNSTSWETLAEGHIRER 436
++ + T+ + ++R R
Sbjct: 1095 ISTLPYSTVLDAYLRNR 1111
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 9/253 (3%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT-LKDR 176
K R AL +YD M G A + +D + K+ ++ A + D LK
Sbjct: 410 KMGRLDLALGLYDEMRAIG--CTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 467
Query: 177 RV-YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
V + AL+ AY ++ + +AE D+M + G L Y VM+ ++ + E ++ +
Sbjct: 468 LVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYR 527
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
M + G + D Y + L++ +++EGV + M+ +NP ++++ IK
Sbjct: 528 AMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNP-----LVISSILIKA 582
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+ + L+R + D +L Y +GK E+ + R P NL
Sbjct: 583 ECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLIS 642
Query: 356 HAMISSLARIGDI 368
I L + G I
Sbjct: 643 ECSIMLLCKNGKI 655
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 116/303 (38%), Gaps = 60/303 (19%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DRR++ AL++AY + + +A + D M KG N MM + DE+ +V
Sbjct: 781 DRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVV 840
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV-------------------- 274
E+++ I++ + + L + G VFE+MK+
Sbjct: 841 QELQDLDIKISKSTVLLMLEAFAKAGD------VFEVMKIYNGMKAAGYLPNMHLYRIMI 894
Query: 275 --------------------DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
P+ +T+ MY G ++ E +
Sbjct: 895 SLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLE 954
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLY----RSVFPGVTNLGYHAMISSLARIGDIEG 370
D Y+ L+ +Y + EE + + LY R + P + + Y ++++ + E
Sbjct: 955 PDEDTYNTLIVMYSRNFRPEEGFTL--LYEMGKRGLTPKLES--YKILLAASGKAKLWEQ 1010
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+ +FEE + + I ++MM Y N KAE +++ E+G +P T+A
Sbjct: 1011 ADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEP------TIAT 1064
Query: 431 GHI 433
HI
Sbjct: 1065 MHI 1067
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN ++ +Y + +E +++ EM ++G+ + SY I L++ G E+ + +FE M+
Sbjct: 960 YNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMR 1019
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
K N + + M +Y KAE L ++ H L++ YG+ G
Sbjct: 1020 T-KGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHP 1078
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE-GMEKIFE 376
+E +V N +S ++ L Y ++ + R D G+ K+ E
Sbjct: 1079 DEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLE 1122
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 51/283 (18%), Positives = 107/283 (37%), Gaps = 45/283 (15%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+N MM +Y + +D+ ++ M+++ I D+ S+N +++ G + L +
Sbjct: 224 FNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHE 283
Query: 274 VDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
V +A + P+ T++T+ + Q ++++ E I R
Sbjct: 284 VRQAGLRPDAITYNTLIS---ACSQGSNLDDAVAVFEEMIASECRPD------------- 327
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+W Y+AM+S R G + E +F+E + D N
Sbjct: 328 ------LWT-------------YNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNS 368
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI---------LEALS 443
++ + KEG+ ++ E +++ G + + ++ T+ + + R+ + A+
Sbjct: 369 LLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIG 428
Query: 444 CLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVAL 486
C A K + K EE +D G K V
Sbjct: 429 CTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTF 471
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 11/277 (3%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD---KGYAVHSLPYNVMMTLYMKIK 225
+PDT+ Y ++ Y +A G + ++K RD K + Y ++ +
Sbjct: 250 VPDTV----TYNIMIKGYCKA---GKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSER 302
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++D S+ EM+E+G+ + +SY++ + Q + VFE M K N +
Sbjct: 303 DFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMN-QKGCRANVAIY 361
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ + Y K G +E+A R+++ D V Y L++ G+ ++ +++ R+
Sbjct: 362 TALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRN 421
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ + Y ++I L + G IE E +FEE + D N ++ K G D+
Sbjct: 422 KGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQ 481
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
A A F + EEG ++ L +G +E + EA+
Sbjct: 482 ALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAI 518
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 1/242 (0%)
Query: 197 LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
L+ +++D+G + N ++ + + +E+ + MKE GI +Y+YN ++
Sbjct: 169 LVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGL 228
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
+ E E VFE+M K V P+ T++ M Y K G+++KA E R +E + D
Sbjct: 229 VNSMFIESAEKVFEVMDGGKIV-PDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPD 287
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
++ Y L+ S + ++ + Y +I L + +FE
Sbjct: 288 KITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFE 347
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ I ++ Y K G+ ++A F + EG +P++ ++ L G +
Sbjct: 348 TMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSG 407
Query: 437 RI 438
R+
Sbjct: 408 RL 409
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%)
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
L+ +G++G EE+ VW + + Y+ +++ L IE EK+FE K
Sbjct: 189 LIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGK 248
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
D N+M+ Y K G KA F + + KP+ ++ TL + ER L
Sbjct: 249 IVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCL 308
Query: 443 S 443
S
Sbjct: 309 S 309
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 150/320 (46%), Gaps = 23/320 (7%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PDTL 173
R + L++ D M N G +F I + + A++FF+ L P T+
Sbjct: 282 RSWDKILDLLDEMRNEGLQFDEFTCSTVISA--CGREGLINEAKEFFVELKSSGYEPGTV 339
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
Y ALL + +A + A ++ +M D + S+ YN ++ Y++ Y+E ++
Sbjct: 340 ----TYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATV 395
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ M KG+ + +Y +++ G G K +F MK V PN T++++ +
Sbjct: 396 IDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCV-PNVCTYNSILAL-- 452
Query: 294 KMGQVEKAEESLRRV-ESRITG--RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF--P 348
+G+ ++EE ++ + + RI G +R+ ++ LL++ G GK + V V+ ++ P
Sbjct: 453 -LGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEP 511
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
G ++ +IS+ R G K+++E + + N +++ + G++ AE+
Sbjct: 512 GKDT--FNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAES 569
Query: 409 FFNSIIEEGGKPNSTSWETL 428
+ +G KPN TS+ +
Sbjct: 570 VLLDMRNKGFKPNETSFSLM 589
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 152/336 (45%), Gaps = 18/336 (5%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
L + ++ ++K L + + A+ +++W+ + + A++L + ++ G S
Sbjct: 156 LLEVDIVSLLKALDVLGKSERAILLFEWVVSNSVSGDVKLDSKAVEL--MIRILGRESKY 213
Query: 164 DFFLSLPDTLK------DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
L L D + D R +L+AY R A + ++M+D G + + YNVM
Sbjct: 214 SIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVM 273
Query: 218 MTLYMKI-KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
+ +Y K+ + +D++ ++ EM+ +G++ D ++ + +S+CG +G + + F +K
Sbjct: 274 LDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELK-SS 332
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
P T++ + ++ K G +A L+ +E D V Y+ L++ Y G EE
Sbjct: 333 GYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEG 392
Query: 337 YRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NL 392
V + + V P Y +I++ R G ++F + KS P + N
Sbjct: 393 ATVIDTMTRKGVMPNAVT--YTTVINAYGRAGKEVKALQLFNQM--KKSGCVPNVCTYNS 448
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+++ K+ ++ + + G PN +W TL
Sbjct: 449 ILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTL 484
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 131/309 (42%), Gaps = 44/309 (14%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ++NAY RA A L ++M+ G + YN ++ L K +E+ ++S+M
Sbjct: 410 TYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDM 469
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM--------- 288
+ G + ++N L+ CG +G + + VF MK + P TF+T+
Sbjct: 470 RINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMK-NCGFEPGKDTFNTLISAYGRCGS 528
Query: 289 ----ATMYIKM----------------------GQVEKAEESLRRVESRITGRDRVPYHY 322
A MY +M G + AE L + ++ + +
Sbjct: 529 ELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSL 588
Query: 323 LLSLYGSVGKKEEVYRVW-NLYRS-VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
+L Y G + R+ ++Y +FP L +I + + + GME+ FEE +
Sbjct: 589 MLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLL--RTLILANFKCRAVRGMERAFEELM- 645
Query: 381 VKSSYDPR--IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
K+ Y P I N M+S + K +++A+ + I E G +P+ ++ +L + R
Sbjct: 646 -KNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGEC 704
Query: 439 LEALSCLKG 447
+A LKG
Sbjct: 705 WKAEEILKG 713
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 119/310 (38%), Gaps = 81/310 (26%)
Query: 178 VYGALLNAYVRARMRGN---AELLIDKMRDKGYAVHSLPYNVMMTLY------------- 221
Y ALLNA R RG+ AE ++ MR+KG+ + +++M+ Y
Sbjct: 550 TYNALLNALAR---RGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIG 606
Query: 222 ----------------------MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
K + +E E+ + G + D+ +N LS
Sbjct: 607 KDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKN 666
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
E+ + + +L++ + + P+ T++++ MY + G+ KAEE L+ + D V
Sbjct: 667 NMYERAQKMLDLIR-ESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVS 725
Query: 320 YHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y+ ++ + G +E RV + R + P +
Sbjct: 726 YNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTY------------------------ 761
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
N +S Y G F + + + +I++ KPN +++ + +G+ + R+
Sbjct: 762 -------------NTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARK 808
Query: 438 ILEALSCLKG 447
+A+ + G
Sbjct: 809 YQDAMDFIFG 818
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ++ ++L+ + + M A+ ++D +R+ G + YN +M +Y + E + E ++
Sbjct: 652 DMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEIL 711
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ + G D+ SYN + QG ++ V M + + P T++T + Y
Sbjct: 712 KGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTT-RGICPCIFTYNTFVSGYAG 770
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
G + +E + + + + + Y ++ Y K ++
Sbjct: 771 RGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQD 811
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 2/267 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V+ +L YV + NA + D M G N ++ +K E + +M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
GI DV+ +I +++ G ++ G + M+ + V PN T+ ++ Y+ +G
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGYVSLGD 276
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN-LGYH 356
VE A+ L+ + + R+ V Y L+ Y K +E +V + V + Y
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I R G I+ ++ +E L + + I N +++ Y K G +AE +++
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396
Query: 417 GGKPNSTSWETLAEGHIRERRILEALS 443
KP+S S+ TL +G+ RE EA +
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFN 423
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 7/274 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R YG L++ Y R +A L+D+M G + N ++ Y K E E E ++
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M + ++ D YSYN L +G T + + + M + + + P T++T+ +
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM-LQEGIEPTVLTYNTLLKGLCR 449
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP-GVTN- 352
+G + A + + R D V Y LL + K E L++ + G T
Sbjct: 450 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLD---GLFKMENFEGASTLWKDILARGFTKS 506
Query: 353 -LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ ++ MIS L ++G + E+IF++ + S D ++ Y K N +A
Sbjct: 507 RITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKG 566
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
++ E P+ + +L G + RR++E L
Sbjct: 567 AMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 600
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 125/281 (44%), Gaps = 20/281 (7%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGAL++ + + M A +M + G + + + + M++ ++ DE ++ +M
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G D + +L S + +K+ + + PN ++ K G+V
Sbjct: 675 DHGFFPD---HECFLKSDIRYAAIQKIADSLD-ESCKTFLLPNNIVYNIAIAGLCKTGKV 730
Query: 299 EKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+ A RR S ++ + VP Y L+ Y + G +E +R+ + L R + P +
Sbjct: 731 DDA----RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFF 410
Y+A+I+ L + +++ +++F + L K + P + N ++ Y K GN D A
Sbjct: 787 --YNALINGLCKSENVDRAQRLFHK-LHQKGLF-PNVVTYNTLIDGYCKIGNMDAAFKLK 842
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
+ +IEEG P+ ++ L G + I ++ L A
Sbjct: 843 DKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 104/227 (45%), Gaps = 8/227 (3%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDA-AIQLDLIAKVHGVASAEDFF--LSLPDTLKDRR 177
RY ++ D ++ + F L + I + + K V A FF LSL + D
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++ Y A A L D+M +G + + YN ++ K + D + + ++
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKM 295
+KG+ +V +YN + G+ M+ F+L +++ ++P+ T+S + K
Sbjct: 811 HQKGLFPNVVTYNTLIDGYCKIGN---MDAAFKLKDKMIEEGISPSVVTYSALINGLCKH 867
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
G +E++ + L ++ + Y L+ Y G+ +++++++++
Sbjct: 868 GDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDM 914
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 127/329 (38%), Gaps = 34/329 (10%)
Query: 140 RLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL----------------------KDRR 177
R+ A D A+Q+ + GVA E + +L D L K R
Sbjct: 449 RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI 508
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ +++ + AE + DKM+D G + + Y ++ Y K + + M
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ + I + YN +S ++ + M + + + PN T+ + + K G
Sbjct: 569 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGI-RGLTPNIVTYGALIDGWCKEGM 627
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
++KA S + + + ++S +G+ +E + + FP +
Sbjct: 628 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP-----DH 682
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR--IANLMMSWYVKEGNFDKAEAFFNSI 413
+ S R I+ + +E S K+ P + N+ ++ K G D A FF+ +
Sbjct: 683 ECFLKSDIRYAAIQKIADSLDE--SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 740
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
+G P++ ++ TL G+ + EA
Sbjct: 741 SLKGFVPDNFTYCTLIHGYSAAGNVDEAF 769
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/206 (17%), Positives = 87/206 (42%), Gaps = 5/206 (2%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L + VY + + +A + KG+ + Y ++ Y DE
Sbjct: 711 LPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR 770
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM +G+ ++ +YN ++ + ++ + +F + K + PN T++T+ Y
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH-QKGLFPNVVTYNTLIDGY 829
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K+G ++ A + ++ V Y L++ G E ++ N + + GV +
Sbjct: 830 CKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLN--QMIKAGVDS 887
Query: 353 --LGYHAMISSLARIGDIEGMEKIFE 376
+ Y ++ R G+++ + K+++
Sbjct: 888 KLIEYCTLVQGYIRSGEMQKIHKLYD 913
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 169/382 (44%), Gaps = 44/382 (11%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
A VL+D + +T + C VVK + + ++ ALEVY+W+N R + +A A L
Sbjct: 173 ADVLDDRKV---QMTPTDFCFVVKWVGQ-SSWQRALEVYEWLNLR-HWYSPNARMLATIL 227
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
++ K + A A + F + +VY A++ Y R + L+D MR +G
Sbjct: 228 SVLGKANQEALAVEIFARAEAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEP 287
Query: 210 HSLPYNVMMTLYMKIKEY--DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ +N ++ +K + +++E++ GI+ D+ +YN +S+C + + E+
Sbjct: 288 DLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVK 347
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR------IT-------- 313
V+ M V P+ T++ M ++Y + G +A + +ES+ +T
Sbjct: 348 VYNDM-VAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAF 406
Query: 314 ---------------------GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G+D + Y+ ++ +YG G+ + +++++ +
Sbjct: 407 AREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDA 466
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y +I SL + I+ ++ E L+ R + ++ Y K G +AE F+
Sbjct: 467 VTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDC 526
Query: 413 IIEEGGKPNSTSWETLAEGHIR 434
++ G KP+ ++ + + +R
Sbjct: 527 MLRSGIKPDHLAYSVMLDILLR 548
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 122/294 (41%), Gaps = 15/294 (5%)
Query: 164 DFFLSLPDTLKDRRVYG---------ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPY 214
+ F D R YG +++ Y + A LID+ +KG +
Sbjct: 722 ELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSI 781
Query: 215 NV-MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+ ++ Y K+K + + ES+V +++K +D +N + + + G E+ +F M
Sbjct: 782 HTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMM 841
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D +P + + + I G++++ ++ ++ + +L + G
Sbjct: 842 RD-GPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNI 900
Query: 334 EEVYRVWNLYRSV--FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
EV +++ ++ FP T Y MI LA+ + +E + E D I N
Sbjct: 901 FEVKKIYQGMKAAGYFP--TMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWN 958
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
++ Y G+F K + I E G KP+ ++ TL + R+RR E LS +
Sbjct: 959 SVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLM 1012
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 36/247 (14%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
+L+A+ A + + M+ GY Y +M+ L K K +VE+MVSEM+
Sbjct: 890 MLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAX 949
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ D+ +N L G +K V++L++ + + P+ T++T+ MY
Sbjct: 950 FKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQ-EAGLKPDEDTYNTLILMYC-------- 1000
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
RDR P L ++ E+ RV + P + Y ++IS+
Sbjct: 1001 -------------RDRRPEEGLSLMH-------EMRRV-----GLEPKLDT--YKSLISA 1033
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
++ +E E++FE LS + D ++MM + GN KAE + E G +P
Sbjct: 1034 FGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPT 1093
Query: 422 STSWETL 428
+ L
Sbjct: 1094 IATMHLL 1100
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 130/315 (41%), Gaps = 11/315 (3%)
Query: 139 FRLSASDAAIQLDLIAKVHGVASAEDFFLSLP-----DTLKDRRVYGALLNAYVRARMRG 193
F++S S + LD A + + + + T+ R+ LL R R
Sbjct: 880 FKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVR--- 936
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN-IW 252
+ E ++ +M + +N ++ LY I ++ + + ++E G++ D +YN +
Sbjct: 937 DVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLI 996
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
L C + E + + E+ +V + P T+ ++ + + K+ VE+AEE + S+
Sbjct: 997 LMYCRDRRPEEGLSLMHEMRRV--GLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKE 1054
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
DR YH ++ ++ + G + ++ + + T H ++ S + G E E
Sbjct: 1055 CKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAE 1114
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
K+ + + ++ Y+K G+ + A + ++G +P+ W
Sbjct: 1115 KVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAA 1174
Query: 433 IRERRILEALSCLKG 447
+ EA+ LK
Sbjct: 1175 SLSQHTSEAIVLLKA 1189
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 113/275 (41%), Gaps = 17/275 (6%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y +LL A+ R + + + M G+ + YN ++ +Y K ++D
Sbjct: 393 LPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQ 452
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ S+MK G D +Y + + S G ++ V M ++ V P TFS + Y
Sbjct: 453 LYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEM-LNAXVKPTLRTFSALICGY 511
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL---YGSVGKKEEVYRVWNLYRSVFPG 349
K G+ +AEE+ + D + Y +L + + GK ++Y+ L+ S P
Sbjct: 512 AKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLH-SFKP- 569
Query: 350 VTNLGYHAMISSLA---RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
+ Y M+ L R D+ + K EE + S ++ S VK FD A
Sbjct: 570 -DHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNS-------QVICSILVKGECFDHA 621
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
I +G + + + ++ + R LEA
Sbjct: 622 ANMLRLAISQGCELDRENLLSILGSYGSSGRHLEA 656
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 89/213 (41%), Gaps = 3/213 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A+++ Y R M A L + KG+ ++ YN ++ + + D+V+ +
Sbjct: 360 DLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEIC 419
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M + G D +YN + G +G + ++ MK+ +P+ T++ + K
Sbjct: 420 EDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKL-SGRSPDAVTYTVLIDSLGK 478
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+++A E + + + + L+ Y GK+ E ++ +L
Sbjct: 479 ANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLA 538
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
Y M+ L R + K+++E V S+ P
Sbjct: 539 YSVMLDILLRFNESGKAMKLYQEM--VLHSFKP 569
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 154/340 (45%), Gaps = 16/340 (4%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V++EL K R AL + + M RG + + ++ ++ + K + A++F +
Sbjct: 55 VIQELCKAGRVDSALSLLETMIKRG--YCPDMATHSMLINELCKADKIQEAQEFLQGMNR 112
Query: 172 TLKDRRV----YGALLNAYVRARMRGNAELLIDKM-RDKGYAVHSLPYNVMMTLYMKIKE 226
T+ R Y +LLN+ +A+ A + M ++ + Y++++ + KI E
Sbjct: 113 TISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDE 172
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
E + +M + +V +YN +L+ +G +GV+E M + +P+ T+S
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM-ISAGCSPDVITYS 231
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYR 344
T+ + + ++A E + SR + V Y+ LL K +E + ++ + R
Sbjct: 232 TLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 291
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGN 402
P + Y ++ +G IE ++F+E +S +DP + N ++ + + G
Sbjct: 292 GCDP--DKVTYTTLLYGFCNVGKIEQAVEVFDEMVS--KGHDPDVVAYNCLLKGFFRAGK 347
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+A F ++ KP++ S + +G + +R+ +A+
Sbjct: 348 PGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAV 387
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 100/234 (42%), Gaps = 6/234 (2%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y L++ + AR A L + M +G +++ YN ++ K + DE
Sbjct: 225 PDVI----TYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDE 280
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ +M E+G D +Y L + G E+ VF+ M V K +P+ ++ +
Sbjct: 281 AHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEM-VSKGHDPDVVAYNCLL 339
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+ + G+ +A + + + SR D V ++ ++ + ++ V+
Sbjct: 340 KGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC 399
Query: 350 VTNL-GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+L Y+++I L + K+F+E +K S DP N+++ G+
Sbjct: 400 SPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 87/216 (40%), Gaps = 4/216 (1%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRR 177
R++ A E+++ M +RG R +A L + K A + F + + D+
Sbjct: 241 RKHDQAHELFEAMISRG--CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKV 298
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL + A + D+M KG+ + YN ++ + + + E + M
Sbjct: 299 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVM 358
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ + D S+NI + + VFE M+ D +P+ T++++ +
Sbjct: 359 VSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQR 418
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ +A + + ++ D ++ LL + G K
Sbjct: 419 LSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGHK 454
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 125/278 (44%), Gaps = 5/278 (1%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y ++L+ Y + A + KMR G + Y+++M K E
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ M ++G++ ++ +Y L ++G+ +M G+ +LM V ++P+ FS +
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM-VRNGIHPDHYVFSILICA 380
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPG 349
Y G+V++A ++ + + V Y ++ + G+ E+ +Y + + PG
Sbjct: 381 YANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
N+ Y+++I L E E++ E L + N ++ + KEG ++E
Sbjct: 441 --NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKG 447
F ++ G KPN ++ TL G+ ++ EA+ L G
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 131/300 (43%), Gaps = 37/300 (12%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YGA++ ++ +A L ++M D+G + ++ YN ++ +++ E ++ EM
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++GI L+ +N + S +G + E +FELM V V PN T++T+ Y G+
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM-VRIGVKPNVITYNTLINGYCLAGK 526
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN------------LYRS 345
+++A + L + S + V Y L++ Y + + E+ ++ Y
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 346 VFPG----------------VTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ G +T G Y+ ++ L + + ++F+ +
Sbjct: 587 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ R N+M+ +K G D+A+ F + G PN ++ +AE +I + +LE L
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE-NIIGQGLLEEL 705
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 117/272 (43%), Gaps = 9/272 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT-LYMKIKEYDEVESM 233
D YG L+ RA + + KG+ V ++ + ++ L + D ++ +
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145
Query: 234 VSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVN--PNWTTFSTMAT 290
+ M E G +V+SYNI L C S E +E + +M D+ P+ +++T+
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALE-LLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFP 348
+ K G +KA + + R D V Y+ +++ ++ V N + V P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ Y++++ G + ++ S D +L+M + K G +A
Sbjct: 265 DC--MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
F+S+ + G KP T++ TL +G+ + ++E
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 117/294 (39%), Gaps = 19/294 (6%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
S PD + Y ++N + + A +M D+G + YN ++ K +
Sbjct: 192 SPPDVVS----YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
D+ +++ M + G+ D +YN L S G ++ G + M+ D V P+ T+S
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSD-GVEPDVVTYSL 306
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RS 345
+ K G+ +A + + R + Y LL Y + G E++ + +L
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ P + + +I + A G ++ +F + + + ++ K G +
Sbjct: 367 IHP--DHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 424
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIR-------ERRILEALS---CLKGAF 449
A +F +I+EG P + + +L G E ILE L CL F
Sbjct: 425 AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 478
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 144/334 (43%), Gaps = 10/334 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V+ L KF R A ++ + M RG F ++ + K+ V +A+D F +P
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRG--FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 172 TLKDRRVYGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ ++ L++ +V R+ +L D + G YN ++ Y K
Sbjct: 351 --PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++ +M+ KG + +VYSY I + G ++ V M D + PN F+ + +
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLIS 467
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
+ K ++ +A E R + + D ++ L+S G E + +W L + GV
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIKHALWLLRDMISEGV 525
Query: 351 T--NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ Y+ +I++ R G+I+ K+ E + S D N ++ + G DKA +
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F ++ +G P++ S L G R + EA+
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 130/348 (37%), Gaps = 40/348 (11%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
VL+D G + +V K + A V + M+ G + + I
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA-- 468
Query: 153 IAKVHGVASAEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
K H + A + F +P D + +L++ +A L+ M +G +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
++ YN ++ +++ E E +V+EM +G LD +YN + G +K +FE
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M D P+ + + + + G VE+A E
Sbjct: 589 KMLRDGHA-PSNISCNILINGLCRSGMVEEAVEF-------------------------- 621
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
+KE V R P + ++++I+ L R G IE +F + + D
Sbjct: 622 -QKEMVLR------GSTPDIVT--FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
N +MSW K G A + IE+G PN +W L + I + +
Sbjct: 673 NTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/420 (19%), Positives = 158/420 (37%), Gaps = 59/420 (14%)
Query: 86 PQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYK---------HALEVYDWMNNR- 135
P++G N+WEK + L ++ F+ YK ++E++ W ++
Sbjct: 46 PEIGGTDSANEWEKLLKPFDLDSLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQN 105
Query: 136 GERFRLSASDAAI-------------QLDLIAKVHGVASAEDFFLSL---------PD-- 171
G R I +L + K G+ E F+S+ P
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165
Query: 172 ---TLKDRRVYGA---------LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
L+ R VY +L V A + M + + V+M
Sbjct: 166 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
+ + E D S++ +M + G + Y + S + + E M + V
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV- 284
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
P+ TF+ + K ++ +A + + R+ R D + Y YL++ +G+ + +
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY----DPRIANLMMS 395
+ YR P + + ++ +I G ++ + + + + +SY D N ++
Sbjct: 345 F--YRIPKPEI--VIFNTLIHGFVTHGRLDDAKAVLSDMV---TSYGIVPDVCTYNSLIY 397
Query: 396 WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
Y KEG A + + +G KPN S+ L +G + +I EA + L +A+G K
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN-EMSADGLK 456
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 134/287 (46%), Gaps = 12/287 (4%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
A + ++A+ +A A + P D Y AL++A+ RA +A + +M D G
Sbjct: 145 ATAIRVMARAGRLAEASALLDAAPG--PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSG 202
Query: 207 YAVHSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ YNV++ +Y K+ + EV +V+ MKE G+ D Y+YN +S C + ++
Sbjct: 203 VQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEA 262
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
VF+ MK P+ TF+++ +Y K + ++A E ++ +E V Y+ L+S
Sbjct: 263 AQVFDEMKAS-GFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLIS 321
Query: 326 LYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
Y G E+ + + + P V Y +IS L R G I+ ++E V++
Sbjct: 322 SYVKDGLLEQAVALKQEMEVKGIKPDVVT--YTTLISGLDRAGKIDAAIVEYDEM--VRN 377
Query: 384 SYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
P + N ++ + G F + A F+ + G P+ +W TL
Sbjct: 378 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTL 424
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 160/402 (39%), Gaps = 49/402 (12%)
Query: 44 RQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGS--ASVLNDWEKGG 101
R K P + ++ S G V ++ WN + L++ L S + V + +K G
Sbjct: 396 RGKFPEMMAVFDELRSAGFVP----DIVTWNTL---LAVFGQNGLDSEVSGVFKEMKKAG 448
Query: 102 RSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS 161
+ ++ + + A+++Y M G +S +A L +A+
Sbjct: 449 YIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAV--LSALARGGRWEQ 506
Query: 162 AEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AE F + D D Y +LL+AY A+ + L D + + H+ ++
Sbjct: 507 AEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVL 566
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
+ K+ E E E+++K LD+ N +S G K+E + LMK + A+N
Sbjct: 567 VNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMK-ESAIN 625
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
+ T++++ MY ++G EK E L ++S DR Y+ ++ YG G+ +E R
Sbjct: 626 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR- 684
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+F E D N+ + YV
Sbjct: 685 ----------------------------------LFSEMKCSGLKPDVVTYNIFVKSYVS 710
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F++A ++ +G KPN ++ ++ EG+ R ++ +A
Sbjct: 711 NSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 168/408 (41%), Gaps = 68/408 (16%)
Query: 87 QLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
+L AS L D G + L V + R++ A+ V+ M + G + + +
Sbjct: 156 RLAEASALLDAAPGPDAGAYTAL---VSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNV 212
Query: 147 AIQL------------DLIA--KVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
+ + +L+A K HGVA DR Y L++ R +
Sbjct: 213 VLHVYSKMAVPWKEVVELVASMKEHGVAP-------------DRYTYNTLISCCRRRALY 259
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
A + D+M+ G+ + +N ++ +Y K + +DE ++ EM+ G V +YN
Sbjct: 260 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 319
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+SS G E+ + + M+V K + P+ T++T+ + + G+++ A +
Sbjct: 320 ISSYVKDGLLEQAVALKQEMEV-KGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 378
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--------------------------- 345
+ Y+ L+ ++G GK E+ V++ RS
Sbjct: 379 CKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVS 438
Query: 346 -VFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
VF + G Y ++ISS +R G + +I++ + D N ++S
Sbjct: 439 GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSAL 498
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI--LEALS 443
+ G +++AE F + E KP+ S+ +L + +R+ ++ALS
Sbjct: 499 ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS 546
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 146/326 (44%), Gaps = 7/326 (2%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ +R Y +L+++Y R + A + +M + G YN +++ + +++ E
Sbjct: 450 IPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEK 509
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ +EM+E+ + D YSY+ L + + +KM+ + + + ++ NW T+ +
Sbjct: 510 LFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLV-KTLVLVN 568
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K+ + +AE++ + + D + ++S+YG +V ++ +L + ++
Sbjct: 569 SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSA 628
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y++++ +R+GD E E I E S D N ++ Y ++G +A F+
Sbjct: 629 ATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSE 688
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACE 472
+ G KP+ ++ + ++ EA+ ++ +G K P + +
Sbjct: 689 MKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR-YMVTQGCK---PNERTYNSIVEGYC 744
Query: 473 EESDMGSKEAFVALLRQ--PGYRKEK 496
+ + FV+ L Q PGY K++
Sbjct: 745 RNGKLTDAKIFVSNLPQLHPGYSKQE 770
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 127/267 (47%), Gaps = 13/267 (4%)
Query: 169 LPDTLKDRRVYGALL--NAYVRARMR------GNAELLIDKMRDKGYAVHSLPYNVMMTL 220
L D ++D+ + L+ N + AR + G A L+ ++R G ++ YN +++
Sbjct: 16 LLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISA 75
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
+ D+ ++ EM R D+++YN +S G G ++ E +F+ + V+K P
Sbjct: 76 CSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKEL-VEKGFQP 134
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
+ T++++ + K G VE+ E + +D + Y+ ++ +YG +G+ + ++
Sbjct: 135 DAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLY 194
Query: 341 NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYV 398
+ R++ + Y ++ SL ++ I K+ EE + P + ++ Y
Sbjct: 195 DEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM--ADAGLKPTLVTFSALICAYA 252
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSW 425
K G D AE F+ ++E G KP+ ++
Sbjct: 253 KSGRQDDAERTFDRMVESGVKPDRLAY 279
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 106/227 (46%), Gaps = 5/227 (2%)
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
M +Y + +D+ ++ M+++ I D+ S+N +++ G + L +V +A
Sbjct: 1 MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 60
Query: 278 -VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
+ P+ T++T+ + + ++ A + + D Y+ ++S++G GK +E
Sbjct: 61 GLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEA 120
Query: 337 YRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
++ + + P Y++++ + A+ GD+E +E++ EE + D N M+
Sbjct: 121 ELMFKELVEKGFQPDAVT--YNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMI 178
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
Y K G D A ++ + G P++ ++ L + + RI EA
Sbjct: 179 HMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 225
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A+++ + R AEL+ ++ +KG+ ++ YN ++ + K + + VE + E+
Sbjct: 103 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 162
Query: 238 KEKGIRLDVYSYNIWLSSCGSQG-----------------------------STEKMEGV 268
+ G R D +YN + G G S KM+ +
Sbjct: 163 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRI 222
Query: 269 FELMKV-----DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
E KV D + P TFS + Y K G+ + AE + R+ DR+ Y +
Sbjct: 223 SEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVM 282
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPG---VTNLGYHAMISSLARI-------GDIEGMEK 373
L ++ + +E ++ LYR++ + Y ++++LA+ G I+ ME
Sbjct: 283 LDVF---ARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEA 339
Query: 374 IFE 376
+FE
Sbjct: 340 VFE 342
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT-LKDR 176
K R AL +YD M G A + +D + K+ ++ A + D LK
Sbjct: 183 KMGRLDLALGLYDEMRAIG--CTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 240
Query: 177 RV-YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
V + AL+ AY ++ + +AE D+M + G L Y VM+ ++ + E ++ +
Sbjct: 241 LVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYR 300
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
M + G + D Y + L++ +++EGV + M+ +NP
Sbjct: 301 AMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNP 345
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 146/335 (43%), Gaps = 20/335 (5%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
L + +L ++K L ++ AL + W ++ G A+DAA L+++ + G
Sbjct: 108 LLRSDLPSLLKALELSGHWEWALALLRWASDEG------AADAA-ALEMVVRALGREGQH 160
Query: 164 DFFLSL-------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
D L P + D R Y +L+A RA A L ++R +G + YNV
Sbjct: 161 DVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNV 220
Query: 217 MMTLYMKI-KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ +Y ++ + + + +++ EM+ G+ D ++ + +++CG G ++ FE +K
Sbjct: 221 VLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKAR 280
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
V P T++ + ++ K G +A L+ +E D V Y+ L Y G EE
Sbjct: 281 GHV-PCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEE 339
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLM 393
+ + S Y+ ++++ A +G ++ +F+ K+ Y P + NL+
Sbjct: 340 AAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRM--KKNGYVPNVNTYNLI 397
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
K+ F + G PN +W T+
Sbjct: 398 FGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTM 432
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 147/320 (45%), Gaps = 9/320 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ALL + +A A ++ +M D G ++ YN + Y + ++E + M
Sbjct: 288 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 347
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ + ++YN +++ + G ++ +F+ MK + V PN T++ + M K +
Sbjct: 348 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYV-PNVNTYNLIFGMLGKKSR 406
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E L + +RV ++ +L++ G G ++ V RV N +S ++ Y+
Sbjct: 407 FTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNT 466
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIE 415
+IS+ R G K+++E +S S + P + N +++ ++G++ A++ + +++
Sbjct: 467 LISAYGRCGSRTYAFKMYDEMIS--SGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLK 524
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEES 475
G KPN S+ L + + + S K + SW VI FK E
Sbjct: 525 NGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLE- 583
Query: 476 DMGSKEAFVALLRQPGYRKE 495
G ++AF + Q GY+ +
Sbjct: 584 --GVEKAFQEVKAQ-GYKPD 600
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 13/292 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L Y RA A +D M KG ++ YN +MT Y + DE ++
Sbjct: 320 DAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALF 379
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MK+ G +V +YN+ G + M + E M PN T++TM + K
Sbjct: 380 DRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMS-RSGCTPNRVTWNTMLAVCGK 438
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVF-PGVTN 352
G + L ++S R Y+ L+S YG G + +++++ + S F P +T
Sbjct: 439 RGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTT 498
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP--RIANLMMSWYVKEGNFDKAEAFF 410
Y+A+++ L+R GD + I + L K+ + P + +L++ Y K GN E+
Sbjct: 499 --YNALLNVLSRQGDWSTAQSIVSKML--KNGFKPNDQSYSLLLQCYAKGGNAAGIESIE 554
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
+ P+ TL + + RR L ++ AF A+ ++P V
Sbjct: 555 KEVYVGTIFPSWVILRTLVIANFKCRR----LEGVEKAFQEVKAQGYKPDLV 602
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 145/323 (44%), Gaps = 13/323 (4%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD 175
L K R+ LE+ + M+ G + + + + V G ED+ + + +K
Sbjct: 401 LGKKSRFTAMLEMLEEMSRSG------CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKS 454
Query: 176 ------RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
R Y L++AY R R A + D+M G+ YN ++ + + ++
Sbjct: 455 CGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWST 514
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+S+VS+M + G + + SY++ L G+ +E + + + V + P+W T+
Sbjct: 515 AQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVG-TIFPSWVILRTLV 573
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K ++E E++ + V+++ D V ++ +L++Y G + +++ +
Sbjct: 574 IANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLS 633
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y++++ A+ + EKI ++ S + D N +++ + K+G +A+
Sbjct: 634 PDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRI 693
Query: 410 FNSIIEEGGKPNSTSWETLAEGH 432
+ +I +G P ++ TL G+
Sbjct: 694 LSEMIADGMAPCVVTYHTLVGGY 716
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 142/379 (37%), Gaps = 61/379 (16%)
Query: 122 YKHALEVYDWMNNRGERFRL--SASDAAIQLDLIA--KVHGVASAEDFF---------LS 168
Y L+V+ N E R+ D+ Q D + ++ G + FF ++
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
L + Y ++ AY A L D+M+ GY + YN++ + K +
Sbjct: 349 SKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFT 408
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--------------- 273
+ M+ EM G + ++N L+ CG +G + + V MK
Sbjct: 409 AMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLI 468
Query: 274 -------------------VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ P TT++ + + + G A+ + ++
Sbjct: 469 SAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFK 528
Query: 315 RDRVPYHYLLSLYGSVGK-------KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD 367
+ Y LL Y G ++EVY ++FP L ++ + +
Sbjct: 529 PNDQSYSLLLQCYAKGGNAAGIESIEKEVY-----VGTIFPSWVIL--RTLVIANFKCRR 581
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
+EG+EK F+E + D I N M++ Y K G + KA F+SI + G P+ ++ +
Sbjct: 582 LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNS 641
Query: 428 LAEGHIRERRILEALSCLK 446
L + + + EA LK
Sbjct: 642 LMDMYAKSNESWEAEKILK 660
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L+ A + R E +++ +GY + +N M+ +Y K Y + M +K+ G
Sbjct: 572 LVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSG 631
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ D+ +YN + + + E + + +K + V P+ +++T+ + K G +++A
Sbjct: 632 LSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQ-VKPDVVSYNTVINGFCKQGLIKEA 690
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMI 359
+ L + + V YH L+ Y S+ E V N ++ ++ P L Y ++
Sbjct: 691 QRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKP--MELTYRRVV 748
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
S + + + E ++D ++ + M+ +K+ F +
Sbjct: 749 DSYCKAKRYDEAREFLSEISDTDQNFDQKLQH-MLEARIKDAQFGR 793
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ++ ++L Y + + A + D ++ G + + YN +M +Y K E E E ++
Sbjct: 600 DLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKIL 659
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++K ++ DV SYN ++ QG ++ + + M D + P T+ T+ Y
Sbjct: 660 KQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 718
Query: 295 MGQVEKAEE 303
+ +A E
Sbjct: 719 LEMFNEARE 727
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 162/369 (43%), Gaps = 15/369 (4%)
Query: 68 RPMIKWNAIFRKLSLMDNPQLGSA-SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHAL 126
R +KW + R++ + GSA VL+ ++ G+ ++K ++ + LR+ ++ L
Sbjct: 38 RKQLKWEKMMREIEVS-----GSAVGVLSSRKEDGK-VSKGDVLGTLIRLRQLNKWTMVL 91
Query: 127 EVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV--YGALLN 184
EV W+ + + + D + + K+ AE F + + + V + +LL
Sbjct: 92 EVLLWLKQQ-DWWNFGIHDFNLMIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLE 150
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG-IR 243
A+ R AE + +M G A + Y V + K + +++ E + + E +
Sbjct: 151 AHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAERFNDAERIFKCLDESAEAK 210
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
D YN+ L + G G + + +F MK V TF+++ V AE
Sbjct: 211 PDARLYNLMLHTYGKAGKFSEQQALFRQMK-GAGVPMTVVTFNSLMAF---QKTVADAEA 266
Query: 304 SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLA 363
LR +++ D + Y L++ Y + EE + V+ + + + Y+ ++ + A
Sbjct: 267 CLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYA 326
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
+ ++EG E +F+ + D R +++ Y GN KAE + + G +PN
Sbjct: 327 KCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVV 386
Query: 424 SWETLAEGH 432
++ TL +G+
Sbjct: 387 TYGTLMQGY 395
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y L+NAY +AR A ++ +M G + YN ++ Y K KE +
Sbjct: 278 PDVI----TYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEG 333
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
ES+ M + R D+ SY L++ + G+ +K E + + MK + PN T+ T+
Sbjct: 334 AESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMK-QAGLEPNVVTYGTLM 392
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
Y + + ++ ++ + + L+ +G
Sbjct: 393 QGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFG 431
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/319 (18%), Positives = 115/319 (36%), Gaps = 71/319 (22%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDTLK---DRRVYGALLNAYVRARMRGNAELLIDKMRD 204
+ ++ + K AE F L ++ + D R+Y +L+ Y +A + L +M+
Sbjct: 182 VYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKG 241
Query: 205 KGYAVHSLPYNVMMTL--------------------------------YMKIKEYDEVES 232
G + + +N +M Y K + +E
Sbjct: 242 AGVPMTVVTFNSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHV 301
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM G+R +YN L + E E +F+ M D+ P+ +++T+ Y
Sbjct: 302 VFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRC-RPDIRSYTTLLAAY 360
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G ++KAE L+R++ + V Y L+ Y SV
Sbjct: 361 ANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSV---------------------- 398
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
DI M + FE+ + I L++ + ++ +F+ A ++F
Sbjct: 399 -------------HDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKK 445
Query: 413 IIEEGGKPNSTSWETLAEG 431
+++ G + S L +
Sbjct: 446 MLDSGCPADQRSRAALMDA 464
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ K RR + A V+ M G R A + LD AK V AE F S+
Sbjct: 286 LINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTL--LDAYAKCKEVEGAESLFKSMGQ 343
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D R Y LL AY AE L+ +M+ G + + Y +M Y + + +
Sbjct: 344 DRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINA 403
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
+ ++++ GI+ + + + + + G Q
Sbjct: 404 MLQTFEDLQKAGIKPNSTIFTLLVRTFGQQ 433
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 146/335 (43%), Gaps = 20/335 (5%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
L + +L ++K L ++ AL + W ++ G A+DAA L+++ + G
Sbjct: 108 LLRSDLPSLLKALELSGHWEWALALLRWASDEG------AADAA-ALEMVVRALGREGQH 160
Query: 164 DFFLSL-------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
D L P + D R Y +L+A RA A L ++R +G + YNV
Sbjct: 161 DVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNV 220
Query: 217 MMTLYMKI-KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ +Y ++ + + + +++ EM+ G+ D ++ + +++CG G ++ FE +K
Sbjct: 221 VLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKAR 280
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
V P T++ + ++ K G +A L+ +E D V Y+ L Y G EE
Sbjct: 281 GHV-PCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEE 339
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLM 393
+ + S Y+ ++++ A +G ++ +F+ K+ Y P + NL+
Sbjct: 340 AAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRM--KKNGYVPNVNTYNLI 397
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
K+ F + G PN +W T+
Sbjct: 398 FGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTM 432
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 147/320 (45%), Gaps = 9/320 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ALL + +A A ++ +M D G ++ YN + Y + ++E + M
Sbjct: 288 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 347
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ + ++YN +++ + G ++ +F+ MK + V PN T++ + M K +
Sbjct: 348 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYV-PNVNTYNLIFGMLGKKSR 406
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E L + +RV ++ +L++ G G ++ V RV N +S ++ Y+
Sbjct: 407 FTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNT 466
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIE 415
+IS+ R G K+++E +S S + P + N +++ ++G++ A++ + +++
Sbjct: 467 LISAYGRCGSRTYAFKMYDEMIS--SGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLK 524
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEES 475
G KPN S+ L + + + S K + SW VI FK E
Sbjct: 525 NGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLE- 583
Query: 476 DMGSKEAFVALLRQPGYRKE 495
G ++AF + Q GY+ +
Sbjct: 584 --GVEKAFQEVKAQ-GYKPD 600
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 13/292 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L Y RA A +D M KG ++ YN +MT Y + DE ++
Sbjct: 320 DAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALF 379
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MK+ G +V +YN+ G + M + E M PN T++TM + K
Sbjct: 380 DRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMS-RSGCTPNRVTWNTMLAVCGK 438
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVF-PGVTN 352
G + L ++S R Y+ L+S YG G + +++++ + S F P +T
Sbjct: 439 RGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTT 498
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP--RIANLMMSWYVKEGNFDKAEAFF 410
Y+A+++ L+R GD + I + L K+ + P + +L++ Y K GN E+
Sbjct: 499 --YNALLNVLSRQGDWSTAQSIVSKML--KNGFKPNDQSYSLLLQCYAKGGNAAGIESIE 554
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
+ P+ TL + + RR L ++ AF A+ ++P V
Sbjct: 555 KEVYVGTIFPSWVILRTLVIANFKCRR----LEGVEKAFQEVKAQGYKPDLV 602
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 145/323 (44%), Gaps = 13/323 (4%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD 175
L K R+ LE+ + M+ G + + + + V G ED+ + + +K
Sbjct: 401 LGKKSRFTAMLEMLEEMSRSG------CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKS 454
Query: 176 ------RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
R Y L++AY R R A + D+M G+ YN ++ + + ++
Sbjct: 455 CGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWST 514
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+S+VS+M + G + + SY++ L G+ +E + + + V + P+W T+
Sbjct: 515 AQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVG-TIFPSWVILRTLV 573
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K ++E E++ + V+++ D V ++ +L++Y G + +++ +
Sbjct: 574 IANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLS 633
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y++++ A+ + EKI ++ S + D N +++ + K+G +A+
Sbjct: 634 PDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRI 693
Query: 410 FNSIIEEGGKPNSTSWETLAEGH 432
+ +I +G P ++ TL G+
Sbjct: 694 LSEMIADGMAPCVVTYHTLVGGY 716
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 142/379 (37%), Gaps = 61/379 (16%)
Query: 122 YKHALEVYDWMNNRGERFRL--SASDAAIQLDLIA--KVHGVASAEDFF---------LS 168
Y L+V+ N E R+ D+ Q D + ++ G + FF ++
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
L + Y ++ AY A L D+M+ GY + YN++ + K +
Sbjct: 349 SKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFT 408
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--------------- 273
+ M+ EM G + ++N L+ CG +G + + V MK
Sbjct: 409 AMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLI 468
Query: 274 -------------------VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ P TT++ + + + G A+ + ++
Sbjct: 469 SAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFK 528
Query: 315 RDRVPYHYLLSLYGSVGK-------KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD 367
+ Y LL Y G ++EVY ++FP L ++ + +
Sbjct: 529 PNDQSYSLLLQCYAKGGNAAGIESIEKEVY-----VGTIFPSWVIL--RTLVIANFKCRR 581
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
+EG+EK F+E + D I N M++ Y K G + KA F+SI + G P+ ++ +
Sbjct: 582 LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNS 641
Query: 428 LAEGHIRERRILEALSCLK 446
L + + + EA LK
Sbjct: 642 LMDMYAKSNESWEAEKILK 660
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L+ A + R E +++ +GY + +N M+ +Y K Y + M +K+ G
Sbjct: 572 LVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSG 631
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ D+ +YN + + + E + + +K + V P+ +++T+ + K G +++A
Sbjct: 632 LSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQ-VKPDVVSYNTVINGFCKQGLIKEA 690
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMI 359
+ L + + V YH L+ Y S+ E V N ++ ++ P L Y ++
Sbjct: 691 QRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKP--MELTYRRVV 748
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
S + + + E ++D ++ + M+ +K+ F +
Sbjct: 749 DSYCKAKRYDEAREFLSEISDTDQNFDQKLQH-MLEARIKDAQFGR 793
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ++ ++L Y + + A + D ++ G + + YN +M +Y K E E E ++
Sbjct: 600 DLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKIL 659
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++K ++ DV SYN ++ QG ++ + + M D + P T+ T+ Y
Sbjct: 660 KQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 718
Query: 295 MGQVEKAEE 303
+ +A E
Sbjct: 719 LEMFNEARE 727
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 123/268 (45%), Gaps = 9/268 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ +A+ AE ++ M DKG + + Y+ ++ K + D E ++ M
Sbjct: 202 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMI 261
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KG++ DV +YN + + ++ EGV + M +DK V P+ T++T+ K V
Sbjct: 262 DKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHM-IDKGVKPDVVTYNTIIDGLCKAQAV 320
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK-KEEVYRVWNLY-RSVFPGVTNLGYH 356
++A+ L+ + + D Y+ L+ Y S G+ KE V R+ +Y R + P V Y
Sbjct: 321 DRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVT--YS 378
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
++ L + G KIF + ++ P + +++ Y G + ++
Sbjct: 379 LLLDYLCKNGKCTEARKIF--YCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMV 436
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEAL 442
G PN+ + + + ++ I EA+
Sbjct: 437 ANGISPNNYIFNIVLCAYAKKAMIDEAM 464
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 112/264 (42%), Gaps = 1/264 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+YG LL+ Y + L+D M G + ++ +N+++ Y K DE + S M
Sbjct: 411 IYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM 470
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G+ DV +Y I + + G + F M ++ V PN F+++ + +
Sbjct: 471 SQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQM-INDGVTPNSVVFNSLVYGLCTVDR 529
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
EKAEE + + + V ++ ++ + G+ R+ + V + Y+
Sbjct: 530 WEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNT 589
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I G + ++ + +SV D + ++ Y K G D A F ++ +G
Sbjct: 590 LIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKG 649
Query: 418 GKPNSTSWETLAEGHIRERRILEA 441
P + ++ T+ +G RR EA
Sbjct: 650 VTPGAVTYSTILQGLFHTRRFSEA 673
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 124/296 (41%), Gaps = 7/296 (2%)
Query: 150 LDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+D + K V A+ + D D + Y L++ Y+ +++M +G
Sbjct: 311 IDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGL 370
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ Y++++ K + E + M KGI+ +V Y I L ++G+ +
Sbjct: 371 DPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTD 430
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ +LM V ++PN F+ + Y K +++A R+ D V Y L+
Sbjct: 431 LLDLM-VANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDAL 489
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVT--NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+G+ ++ +N + + GVT ++ +++++ L + E E++F E
Sbjct: 490 CKLGRVDDAVLKFN--QMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRP 547
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ N +M EG A+ +S+ G +PN S+ TL GH R EA
Sbjct: 548 NVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEA 603
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 97/236 (41%), Gaps = 13/236 (5%)
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDE-VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
G+ V+ + N ++ K DE ++ ++ M E G +V S N L ++ E+
Sbjct: 120 GWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEE 179
Query: 265 MEGVFELMKVDKAVN--PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
+ M D N PN T++T+ K V++AE L+ + + D V Y
Sbjct: 180 ALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYST 239
Query: 323 LLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
++ + K + V R + + V P V Y+ +I L + ++ E + +
Sbjct: 240 IID---GLCKAQAVDRAEGVLQHMIDKGVKPDVVT--YNTIIDGLCKAQAVDRAEGVLQH 294
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
+ D N ++ K D+A+ +I++ KP+ ++ L G++
Sbjct: 295 MIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYL 350
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y LL Y + NA L +M KG ++ Y+ ++ + + E
Sbjct: 617 PDLIS----YDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSE 672
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ + M + G + D+Y+YNI L+ ++ +F+ + K + PN TF+ M
Sbjct: 673 AKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSL-CSKDLRPNIITFTIMI 731
Query: 290 TMYIKMGQVEKAEESLRRVES 310
+ K G+ + A + + S
Sbjct: 732 DVLFKGGRKKDAMDLFASIPS 752
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/337 (17%), Positives = 127/337 (37%), Gaps = 71/337 (21%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG L++A + +A L ++M + G +S+ +N ++ + +++ E +
Sbjct: 478 DVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELF 537
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM ++G+R +V +N + + ++G + + + M+ V PN +++T+ +
Sbjct: 538 FEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSME-RVGVRPNVISYNTLIGGHCL 596
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G+ ++A + L + S D + Y LL Y G+ + Y ++ L + V PG
Sbjct: 597 AGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVT 656
Query: 353 LG---------------------------------YHAMISSLARIGDIEGMEKIFEEWL 379
Y+ +++ L + ++ KIF+
Sbjct: 657 YSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLC 716
Query: 380 SV----------------------KSSYD-----------PRIAN--LMMSWYVKEGNFD 404
S K + D P + +MM ++EG D
Sbjct: 717 SKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLD 776
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ + F ++ + G P+S + + I+ A
Sbjct: 777 EFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRA 813
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 126/258 (48%), Gaps = 5/258 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+ + + A ++++M KG+ ++ + YNV++ K + + M+ EM
Sbjct: 418 YTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMS 477
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KG + D++++N + E ++ M +D + N T++T+ +++ G +
Sbjct: 478 DKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVI-ANTVTYNTLIHAFLRGGAI 536
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
++A + + + R D + Y+ L+ + +G E+ +++ + + + P +N+ +
Sbjct: 537 QEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVP--SNISCN 594
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I+ L R+G + ++ + + + D N +++ K GN +A FN + E
Sbjct: 595 LLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAE 654
Query: 417 GGKPNSTSWETLAEGHIR 434
G +P++ ++ TL H R
Sbjct: 655 GIQPDAITYNTLICWHCR 672
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/292 (17%), Positives = 118/292 (40%), Gaps = 11/292 (3%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+D+M +G+ + + Y V+M ++ + DE + +++++ DV+ + I ++
Sbjct: 300 LVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPN---DVH-FTILINGYV 355
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G ++ + P+ TF+T+ K G + A + + + + +
Sbjct: 356 KSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNL 415
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
+ Y LL + + EE V N + + +GY+ ++ +L + G + + E
Sbjct: 416 ITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGE 475
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
D N ++ K + A A + ++ +G N+ ++ TL +R
Sbjct: 476 MSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGA 535
Query: 438 ILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
I EAL + +R P++ I + + +G+ E + L +
Sbjct: 536 IQEALKLVNDML-------FRGCPLDEITYNGLIKAFCKLGATEKALGLFDE 580
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 135/321 (42%), Gaps = 28/321 (8%)
Query: 120 RRYKHALEVYDWMNNR-GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV 178
+ Y H +VY + ++ G D +L L K G+A E F+
Sbjct: 96 KGYCHTFDVYHVLIDKLGAAKEFKVID---KLLLQIKEEGIAFRESLFI----------- 141
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL-PYNVMMTLYMKIKEYDEVESMVSEM 237
++ Y RA + G A ++ M+ + YNV++ + + ++ EM
Sbjct: 142 --CIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEM 199
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ VY++ + + + + + M V PN + T+ K +
Sbjct: 200 LSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCV-PNSVVYQTLIHALSKRDR 258
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT--NLGY 355
V +A + L + D ++ ++ + + E ++ + R +F G T ++ Y
Sbjct: 259 VNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVD--RMLFRGFTPNDITY 316
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF-FNSII 414
+++ L R+G ++ + + + V + D ++++ YVK G D+A AF ++ +I
Sbjct: 317 GVLMNGLCRVGKVDEAQVLLNK---VPTPNDVHFT-ILINGYVKSGRLDEANAFLYDKMI 372
Query: 415 EEGGKPNSTSWETLAEGHIRE 435
+ G +P+ ++ TL G ++
Sbjct: 373 KNGCRPDVFTFNTLIHGLCKK 393
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 149/375 (39%), Gaps = 64/375 (17%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
AL++ + A L+ KM ++G+ + + YN +++ K + +E + EM ++
Sbjct: 563 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 622
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN-----------PNWTTFSTMA 289
GI D ++YN+ + G+ + K+D+AVN PN T+ M
Sbjct: 623 GIEPDTFTYNLLI------------HGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 670
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-------- 341
Y K ++E+ E+ + ++ + V Y+ L+ Y G E +++ +
Sbjct: 671 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 730
Query: 342 ----LYRSVFPGVTNLG-----------------------YHAMISSLARIGDIEGMEKI 374
Y S+ G+ N+G Y A+I ++G ++ + +
Sbjct: 731 PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNV 790
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+E S + +M+ Y K G+ A + ++ +G P++ ++ L G +
Sbjct: 791 LQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 850
Query: 435 ERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRK 494
E +I E G AE + + F+AC D+ +K+ F Y
Sbjct: 851 EGKIEE------GKLLAEDGVGFNSPLFLIHEAFRACTRRVDLWAKKFFANYTNPSSYMT 904
Query: 495 EKDYMSLIGLTDEAV 509
K + L G + +V
Sbjct: 905 TKPLLVLFGWSISSV 919
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 114/263 (43%), Gaps = 6/263 (2%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LL++ V+A + + + MR +G + ++ + + K + ++ + +M++ G
Sbjct: 285 LLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLG 343
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ +V +YN + G+ ++ E M V VN T+S + +K+ + +A
Sbjct: 344 VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM-VKDGVNATLITYSVLINGLMKLEKFNEA 402
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMI 359
L+ + + V Y+ L+ Y +G + R+ + + + P L +++I
Sbjct: 403 NSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTL--NSII 460
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+IG +E E I EE LS S +P ++ W F+ A F ++ +
Sbjct: 461 QGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMR 520
Query: 420 PNSTSWETLAEGHIRERRILEAL 442
PN TL G +E + +A+
Sbjct: 521 PNDGLLTTLVGGLCKEGKHSDAV 543
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 121/303 (39%), Gaps = 42/303 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L++ Y + G+A + M KG +S+ N ++ + KI + ++ E ++ EM
Sbjct: 420 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 479
Query: 238 KEKGIRLDVYSYNI---WLSS---------------------------------CGSQGS 261
+G ++ ++ WL C
Sbjct: 480 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 539
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
++ +E F L+ +K N T + + K G +++A L+++ R D++ Y+
Sbjct: 540 SDAVELWFRLL--EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYN 597
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
L+S GK EE +++ + + + P Y+ +I + RIG ++ ++ E
Sbjct: 598 TLISGCCKEGKVEEGFKLRGEMVKQGIEP--DTFTYNLLIHGMCRIGKLDEAVNLWNECK 655
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
S + +M+ Y K ++ E F ++ + + NS + TL + R +
Sbjct: 656 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTV 715
Query: 440 EAL 442
EA
Sbjct: 716 EAF 718
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 118/271 (43%), Gaps = 11/271 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+N ++ A ++ + +KG+ + + YN ++ Y K+ + + +M
Sbjct: 385 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 444
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KGI + + N + G E+ E + E M + + + N F+T+ +
Sbjct: 445 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM-LSRGFSINPGAFTTIIHWLCMNSR 503
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLL-SLYGSV---GKKEEVYRVW-NLYRSVFPGVTN 352
E A LR + R+ P LL +L G + GK + +W L F G
Sbjct: 504 FESALRFLR----EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF-GANL 558
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ +A+I L + G+++ ++ ++ L D N ++S KEG ++
Sbjct: 559 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 618
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALS 443
++++G +P++ ++ L G R ++ EA++
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVN 649
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD 204
+ +D K + E F L + + VY L+ AY R A L D MR
Sbjct: 667 GVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 726
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
KG + Y+ ++ I ++ + ++ EM+++G+ +V Y + G +K
Sbjct: 727 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 786
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
+ V + M ++PN T++ M Y K G ++ A + L + + D V Y+ L
Sbjct: 787 VVNVLQEMS-SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLT 845
Query: 325 SLYGSVGKKEE 335
+ + GK EE
Sbjct: 846 NGFCKEGKIEE 856
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 96/215 (44%), Gaps = 5/215 (2%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D + + YG +++ Y +A E L ++ + ++S+ YN ++ Y + E
Sbjct: 658 DLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEA 717
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ +M+ KGI +Y+ + + G E + + + M+ + + PN ++ +
Sbjct: 718 FKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR-KEGLLPNVVCYTALIG 776
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
Y K+GQ++K L+ + S +++ Y ++ Y G + ++ L+ V G+
Sbjct: 777 GYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKL--LHEMVGKGI 834
Query: 351 T--NLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ Y+ + + + G IE + + E+ + S
Sbjct: 835 VPDTVTYNVLTNGFCKEGKIEEGKLLAEDGVGFNS 869
>gi|115463017|ref|NP_001055108.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|113578659|dbj|BAF17022.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|125551683|gb|EAY97392.1| hypothetical protein OsI_19323 [Oryza sativa Indica Group]
gi|215697097|dbj|BAG91091.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630985|gb|EEE63117.1| hypothetical protein OsJ_17925 [Oryza sativa Japonica Group]
Length = 757
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 128/264 (48%), Gaps = 10/264 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y L+NAY +A AE + +M++KG + ++ YN++M Y + + + VES++ EM
Sbjct: 411 MYNTLINAYCKANQIEEAEGVFVEMKEKGLSATAMTYNILMGAYCRRLQPEVVESLLLEM 470
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
++ G+R + SYN + G Q +EK E F MK D + P +T++++ Y G
Sbjct: 471 QDLGLRPNARSYNFLIRVYGQQKKMSEKAEDAFLRMKTD-GIMPTSSTYTSLLCAYAVNG 529
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFPGVTNLGY 355
EKA + ++ Y L+ ++ G E++ W ++ PG T + +
Sbjct: 530 LHEKAYLTYVDMKREGLKPSLETYTALIDMFRRAGDTEKLMETWRSMINEKVPG-TRVIF 588
Query: 356 HAMISSLARIG-DIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNS 412
H ++ LA+ G ++ + I+E ++ P + N++M+ + + G K
Sbjct: 589 HMVLDGLAKHGLYVQATDVIYE---FRRAGLQPTVMTYNILMNAFARGGQHYKLPQLLKE 645
Query: 413 IIEEGGKPNSTSWETLAEGHIRER 436
+ KP+S ++ T+ + R R
Sbjct: 646 MAAMELKPDSVTYSTMIYAYARVR 669
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 122/267 (45%), Gaps = 2/267 (0%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L + Y L++ Y R+ + ++++M KG + + Y ++ K E E
Sbjct: 458 VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAE 517
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ +M +G+ + YN+ + G + F+ M V + + P T++ +
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEM-VAREIVPTLVTYNILING 576
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
K G+V +AE + + D + Y+ L+S Y S G ++ ++ + T
Sbjct: 577 LCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPT 636
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
YH +I+ + G + +EKI++E L + D I N ++ YV+ G+ KA + +
Sbjct: 637 LNTYHRLIAGCGKEGLVL-VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHS 695
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRI 438
++ +G +P+ ++ L GH +E R+
Sbjct: 696 AMEAQGIQPDKMTYNCLILGHFKEGRM 722
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 5/263 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ ++N Y + A I+KM G + + YN ++ + ++K +E E + +M
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV 454
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG+ +V +YN + G ++ + E M+ K + PN ++ + K +
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEME-KKGLKPNVISYGCLINCLCKDANI 513
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
+AE L + R + Y+ L+ GK ++ +R ++ + R + P T + Y+
Sbjct: 514 LEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVP--TLVTYN 571
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I+ L + G + E + E S+D N ++S Y GN KA + ++ +
Sbjct: 572 ILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKS 631
Query: 417 GGKPNSTSWETLAEGHIRERRIL 439
G KP ++ L G +E +L
Sbjct: 632 GIKPTLNTYHRLIAGCGKEGLVL 654
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 162/390 (41%), Gaps = 48/390 (12%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
++ ++GG S + V+ L K +R K A +++D M +R R++ + L
Sbjct: 204 LMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDR----RVAPNRITYN-TL 258
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKG 206
I V E+ F ++ + +K V + +LLN RA+M A+ ++++M G
Sbjct: 259 IDGYCKVGQLEEAF-NIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
+ Y + ++K D ++ E KG+++ Y+ +I L++ +G+ EK E
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAE 377
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
V + ++ + P F+T+ Y ++G + KA ++ ++E+ + V Y+ L+
Sbjct: 378 EVLKKF-LENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKK 436
Query: 327 YGSVGKKEEVYRVWN--LYRSVFPGVTN-------------------------------- 352
+ + EE + + + V P V
Sbjct: 437 FCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPN 496
Query: 353 -LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y +I+ L + +I E I + + + +I N+++ G A FF+
Sbjct: 497 VISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFD 556
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++ P ++ L G ++ +++EA
Sbjct: 557 EMVAREIVPTLVTYNILINGLCKKGKVMEA 586
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 5/274 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ +YG + A V+ A L+ M+ G + YNV++ K K + E +
Sbjct: 181 DQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLF 240
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM ++ + + +YN + G E+ + E MKV+ V P TF+++ +
Sbjct: 241 DEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN-VEPTIITFNSLLNGLCR 299
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+E+A+ L +E DR Y L + G + + +V GV L
Sbjct: 300 AQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSE--EAVRKGVQILD 357
Query: 355 YHA--MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y ++++L + G++E E++ +++L + N +++ Y + G+ +KA
Sbjct: 358 YTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEK 417
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ G +PN ++ +L + + + EA C+K
Sbjct: 418 MEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIK 451
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 132/346 (38%), Gaps = 42/346 (12%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LL+ ++M + L M+ G N+ + + K Y++ + SE+ E G
Sbjct: 118 LLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESG 177
Query: 242 IRLD-----------------------------------VYSYNIWLSSCGSQGSTEKME 266
+R D V+ YN+ + + + E
Sbjct: 178 LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAE 237
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
+F+ M +D+ V PN T++T+ Y K+GQ+E+A R++ + ++ LL+
Sbjct: 238 KLFDEM-LDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNG 296
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTN-LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
EE RV V+ V + Y + + G+++ + EE +
Sbjct: 297 LCRAQMMEEAQRVLE-EMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQI 355
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+++++ KEGN +KAE +E G P + T+ G+ + I +A + +
Sbjct: 356 LDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTI 415
Query: 446 KGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPG 491
+ A RP V + K E +M E + + + G
Sbjct: 416 EKMEAV----GLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 116/273 (42%), Gaps = 16/273 (5%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ + ++Y L++ A +A D+M + + YN+++ K + E E
Sbjct: 528 VVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAE 587
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ SE+ KG+ DV +YN +S S G+ +K ++E MK + P T+ +
Sbjct: 588 NLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMK-KSGIKPTLNTYHRLIAG 646
Query: 292 YIKMG--QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K G VEK + + ++ DRV Y+ L+ Y G ++ + + +
Sbjct: 647 CGKEGLVLVEKIYQEMLQMN---LVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQ 703
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEE-----WLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ Y+ +I + G + ++ + + + +YD +++ + K +FD
Sbjct: 704 PDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYD-----ILIVGHCKLKDFD 758
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
A ++ + E G P+ + + L G E R
Sbjct: 759 GAYVWYREMFENGFTPSVSICDNLITGLREEGR 791
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 2/267 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V+ +L YV + NA + D M G N ++ +K E + +M
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
GI DV+ +I +++ G ++ G + M+ + V PN T+ ++ Y+ +G
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGYVSLGD 242
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN-LGYH 356
VE A+ L+ + + R+ V Y L+ Y K +E +V + V + Y
Sbjct: 243 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 302
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I R G I+ ++ +E L + + I N +++ Y K G +AE +++
Sbjct: 303 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 362
Query: 417 GGKPNSTSWETLAEGHIRERRILEALS 443
KP+S S+ TL +G+ RE EA +
Sbjct: 363 NLKPDSYSYNTLLDGYCREGHTSEAFN 389
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 7/274 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R YG L++ Y R +A L+D+M G + N ++ Y K E E E ++
Sbjct: 297 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 356
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M + ++ D YSYN L +G T + + + M + + + P T++T+ +
Sbjct: 357 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM-LQEGIEPTVLTYNTLLKGLCR 415
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP-GVTN- 352
+G + A + + R D V Y LL + K E L++ + G T
Sbjct: 416 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLD---GLFKMENFEGASTLWKDILARGFTKS 472
Query: 353 -LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ ++ MIS L ++G + E+IF++ + S D ++ Y K N +A
Sbjct: 473 RITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKG 532
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
++ E P+ + +L G + RR++E L
Sbjct: 533 AMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 566
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 115/251 (45%), Gaps = 20/251 (7%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGAL++ + + M A +M + G + + + + M++ ++ DE ++ +M
Sbjct: 581 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 640
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G D + +L S + +K+ + + PN ++ K G+V
Sbjct: 641 DHGFFPD---HECFLKSDIRYAAIQKIADSLD-ESCKTFLLPNNIVYNIAIAGLCKTGKV 696
Query: 299 EKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+ A RR S ++ + VP Y L+ Y + G +E +R+ + L R + P +
Sbjct: 697 DDA----RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 752
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFF 410
Y+A+I+ L + +++ +++F + L K + P + N ++ Y K GN D A
Sbjct: 753 --YNALINGLCKSENVDRAQRLFHK-LHQKGLF-PNVVTYNTLIDGYCKIGNMDAAFKLK 808
Query: 411 NSIIEEGGKPN 421
+ +IEEG P+
Sbjct: 809 DKMIEEGISPS 819
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 70/375 (18%), Positives = 155/375 (41%), Gaps = 27/375 (7%)
Query: 71 IKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYD 130
+ ++ + L M+N + G++++ D G + ++ ++ L K + A E++D
Sbjct: 439 VGYSTLLDGLFKMENFE-GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 497
Query: 131 WMNNRG-------ERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALL 183
M + G R + A + KV G E S+ +Y +L+
Sbjct: 498 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSI-------EMYNSLI 550
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR 243
+ ++R L+ +M +G + + Y ++ + K D+ S EM E G+
Sbjct: 551 SGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 610
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
++ + +S G ++ + + M VD P+ F I+ ++K +
Sbjct: 611 ANIIICSTMVSGLYRLGRIDEANLLMQKM-VDHGFFPDHECFLKSD---IRYAAIQKIAD 666
Query: 304 SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISS 361
SL + + Y+ ++ GK ++ R +++ + P N Y +I
Sbjct: 667 SLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP--DNFTYCTLIHG 724
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ G+++ ++ +E L + P I N +++ K N D+A+ F+ + ++G
Sbjct: 725 YSAAGNVDEAFRLRDEML--RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLF 782
Query: 420 PNSTSWETLAEGHIR 434
PN ++ TL +G+ +
Sbjct: 783 PNVVTYNTLIDGYCK 797
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 127/329 (38%), Gaps = 34/329 (10%)
Query: 140 RLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTL----------------------KDRR 177
R+ A D A+Q+ + GVA E + +L D L K R
Sbjct: 415 RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI 474
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ +++ + AE + DKM+D G + + Y ++ Y K + + M
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ + I + YN +S ++ + M + + + PN T+ + + K G
Sbjct: 535 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGI-RGLTPNIVTYGALIDGWCKEGM 593
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
++KA S + + + ++S +G+ +E + + FP +
Sbjct: 594 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP-----DH 648
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR--IANLMMSWYVKEGNFDKAEAFFNSI 413
+ S R I+ + +E S K+ P + N+ ++ K G D A FF+ +
Sbjct: 649 ECFLKSDIRYAAIQKIADSLDE--SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 706
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
+G P++ ++ TL G+ + EA
Sbjct: 707 SLKGFVPDNFTYCTLIHGYSAAGNVDEAF 735
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDA-AIQLDLIAKVHGVASAEDFF--LSLPDTLKDRR 177
RY ++ D ++ + F L + I + + K V A FF LSL + D
Sbjct: 657 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 716
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++ Y A A L D+M +G + + YN ++ K + D + + ++
Sbjct: 717 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 776
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPN 281
+KG+ +V +YN + G+ M+ F+L +++ ++P+
Sbjct: 777 HQKGLFPNVVTYNTLIDGYCKIGN---MDAAFKLKDKMIEEGISPS 819
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 127/295 (43%), Gaps = 40/295 (13%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L++ +A+ AE ++ M DKG ++ YN+M+ Y + + +E ++
Sbjct: 237 DVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLL 296
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT----------- 283
+M G++ DV +Y + + G + VF+ M V K PN T
Sbjct: 297 KKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSM-VRKGQKPNSTIYHILLHGYAT 355
Query: 284 ------------------------TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
F+ + Y K G V+KA + + D V
Sbjct: 356 KGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVS 415
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN--LGYHAMISSLARIGDIEGMEKIFEE 377
Y ++ + +G+ E+ V++ + V G++ + + ++I L IG+ + +E++ E
Sbjct: 416 YSTVIHILCKIGRVEDA--VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFE 473
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
++ D N +M KEG +A+ FF+ +I G KPN S+ TL +G+
Sbjct: 474 MINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGY 528
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 11/234 (4%)
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMV-SEMKEKGIRLDVYSYNIWLSS-CGSQGSTE 263
G+ V ++ N ++ K D+ MV M E G DV+SYN + C + S E
Sbjct: 124 GWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQE 183
Query: 264 KMEGVFELMKVDKAVN--PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
+E + M D N PN ++ST+ + K G+V+KA + + D V Y
Sbjct: 184 ALELLLH-MTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYS 242
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVF-PGV--TNLGYHAMISSLARIGDIEGMEKIFEEW 378
SL + K + + + + + +F GV Y+ MI +G +E ++ ++
Sbjct: 243 ---SLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM 299
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
D L++ +Y K G +A + F+S++ +G KPNST + L G+
Sbjct: 300 SGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGY 353
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 116/274 (42%), Gaps = 42/274 (15%)
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
++M +G + + + + ++ I E+ +VE + EM +GI D N + + +
Sbjct: 437 NQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKE 496
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G + + F+ M + V PN +++T+ Y +G+++++ + R+ S D
Sbjct: 497 GRVVEAQDFFD-MVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWT 555
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVF---------------PGVTNLG---------- 354
Y+ LL+ Y G+ E+ LYR +F G+ G
Sbjct: 556 YNALLNGYFKNGRVEDA---LALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYM 612
Query: 355 -------------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
Y+ ++ L ++ ++FE+ S + D N++++ +K G
Sbjct: 613 KMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVG 672
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
D+A++ F++++ G P+ ++ + + I E
Sbjct: 673 RIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEE 706
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 112/271 (41%), Gaps = 7/271 (2%)
Query: 150 LDLIAKVHGVASAEDFF-LSLPDTLKDRRV-YGALLNAYVRARMRGNAELLIDKMRDKGY 207
+D + K V A+DFF + + +K V Y L++ Y + D+M G
Sbjct: 490 MDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGL 549
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
S YN ++ Y K ++ ++ EM K ++ + NI L G
Sbjct: 550 RPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARE 609
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
++ M VD+ T++T+ + V++A + S+ D ++ +++
Sbjct: 610 LYMKM-VDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINAL 668
Query: 328 GSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
VG+ +E +++ + R P V + Y MI S G +E + +F +
Sbjct: 669 LKVGRIDEAKSLFSAMVLRGPVPHV--ITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAA 726
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
D + N+++ +++G+ +A + I E+
Sbjct: 727 DSHMLNVIIRRLLEKGDVRRAGTYLTKIDEK 757
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 152/366 (41%), Gaps = 20/366 (5%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y LL A + A L+D+MRDKG + YNV++ + D+
Sbjct: 191 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 250
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMA 289
+ + G + SYNI L + E+ E ELM K PN TF+ +
Sbjct: 251 EFLKNLPSYGCEPNTVSYNIVLK---GLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 307
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVF 347
+ + G VE A E L ++ + + Y+ LL + K ++ +L R +
Sbjct: 308 SFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 367
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDKA 406
P + + Y+ ++++L R G+++ ++ + L K I+ N ++ K G +A
Sbjct: 368 PDIVS--YNTLLTALCRSGEVDVAVELLHQ-LKDKGCAPVLISYNTVIDGLTKAGKTKEA 424
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV--NV 464
N ++ +G +P+ ++ T+A G RE RI +A+ AF RP V N
Sbjct: 425 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR----AFGKVQDMGIRPNTVLYNA 480
Query: 465 INFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI-GLTDEA-VAENNKKNDEDSDE 522
I C+ + + F ++ E Y LI GL E + E DE
Sbjct: 481 I-ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 539
Query: 523 DSEMLL 528
E+LL
Sbjct: 540 GEEILL 545
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 163/375 (43%), Gaps = 8/375 (2%)
Query: 89 GSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI 148
+A +L E+ G ++ RK RR AL+++ +M +G + ++ I
Sbjct: 221 AAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLI 280
Query: 149 Q-LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
Q L ++ ++ + SL + + D + L++ + A+ ++ M + G
Sbjct: 281 QGLCNFSQWKEASALLNEMRSL-NIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGV 339
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ Y+ +M Y E E + M KG + DV+SYNI ++ ++ +
Sbjct: 340 EPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQ 399
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+F M + + + PN +++T+ ++G + +A + + + + Y LL +
Sbjct: 400 LFNEM-IHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGF 458
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
G + +R++ +S + + Y+ +I ++ + G++ K+F E +
Sbjct: 459 CKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNA 518
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG---HIRERRILEALSC 444
+I +++ KEG D+A F ++ E+G P+ S+ + G H E R ++ +
Sbjct: 519 QIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGE 578
Query: 445 L--KGAFAAEGAKSW 457
+ KG A G +W
Sbjct: 579 MRDKGFIADVGTTAW 593
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 182/469 (38%), Gaps = 89/469 (18%)
Query: 21 QPLPCKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKL 80
+PLPC I FT+L SAI Q + Q+ G I N F L
Sbjct: 92 KPLPCIIQ--FTKL--LSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINC-FSHL 146
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
+D + SVL K G T ++ L K ++ A+E++D M RG R
Sbjct: 147 QRVDL----AFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCR-- 200
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
PD Y ++N + A L+
Sbjct: 201 -----------------------------PDVY----TYTTIINGLCKIGETAAAAGLLK 227
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSY----------- 249
KM + G + + Y+ ++ + K + +E + S MK KGI D+++Y
Sbjct: 228 KMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFS 287
Query: 250 ------------------------NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
N+ + + +G + +GV + M + V P+ T+
Sbjct: 288 QWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM-TEMGVEPDVVTY 346
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LY 343
S++ Y +V +A + + ++ D Y+ L++ Y V + +E +++N ++
Sbjct: 347 SSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIH 406
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+ + P N+ Y+ +I L ++G + +F+ + + + ++++ + K+G F
Sbjct: 407 QGLTP--NNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYF 464
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAE-----GHIRERRILEALSCLKG 447
KA F ++ KPN + L + G++R+ R L + +KG
Sbjct: 465 GKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKG 513
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 193/444 (43%), Gaps = 30/444 (6%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
+ KLS + P GS + + K SL + L V KE + ++ +L ++ +M
Sbjct: 79 TLINKLSSL--PPRGSIARCLEIFKNKLSLNDFAL--VFKEFAQRGDWQRSLRLFKYMQ- 133
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYVRARMR 192
R + + I + L+ + + + + F +P R V Y AL+N+Y R
Sbjct: 134 RQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQY 193
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNI 251
+ L+++M+ + L YN ++ + ++ + S+ +EM+ +GI+ D+ +YN
Sbjct: 194 EVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNT 253
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
L++C ++G ++ E VF M + + P+ TT+ + + K+ ++EK E L+ +ES
Sbjct: 254 LLNACANRGLGDEAEMVFRTMN-EGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESS 312
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEE---VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDI 368
D Y+ LL Y S G V+R R V VT Y +++ G
Sbjct: 313 GNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVT---YSMLLNLYGGHGRY 369
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ + ++F E + D N+++ + + G F + F+ ++EE +PN ++E L
Sbjct: 370 DDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGL 429
Query: 429 AEG---------------HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
H+ E+ I+ + G A G + + + + N
Sbjct: 430 IYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGS 489
Query: 474 ESDMGSKEAFVALLRQPGYRKEKD 497
+ + + + + + + G KE +
Sbjct: 490 KPTVETYNSLINMFARGGLYKESE 513
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 134/311 (43%), Gaps = 46/311 (14%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y LLNA + AE++ M + G Y ++ + K+ + ++
Sbjct: 246 PDII----TYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEK 301
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
V ++ EM+ G D+ SYN+ L + S+G GVF M+ + V PN T+S +
Sbjct: 302 VSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCV-PNAVTYSMLL 360
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVF 347
+Y G+ + E ++ T D Y+ L+ ++G G +EV +++ + +V
Sbjct: 361 NLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVE 420
Query: 348 PGVTNLG-YHAMISSLARIGDIEGMEKI----------------------------FEEW 378
P N+G Y +I + + G E +KI +EE
Sbjct: 421 P---NMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEA 477
Query: 379 LSVKSSYD-----PRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
L + ++ + P + N +++ + + G + ++EA + E G + S+ + EG
Sbjct: 478 LVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEG 537
Query: 432 HIRERRILEAL 442
+ + + EA+
Sbjct: 538 YRQGGQFEEAI 548
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 113/256 (44%), Gaps = 1/256 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y LL AY +A + +M++ +++ Y++++ LY YD+V
Sbjct: 315 LPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRE 374
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EMK DV +YN+ + G G +++ +F M V++ V PN T+ +
Sbjct: 375 LFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDM-VEENVEPNMGTYEGLIYAC 433
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K G E A++ L ++ + Y ++ YG EE ++N + T
Sbjct: 434 GKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTV 493
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+++I+ AR G + E I + + D N ++ Y + G F++A +
Sbjct: 494 ETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVE 553
Query: 413 IIEEGGKPNSTSWETL 428
+ + +P+ ++E +
Sbjct: 554 LEKARFQPDERTFEAV 569
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+ Y ++ AY +A A ++ + M + G YN ++ ++ + Y E E+++ +
Sbjct: 459 KAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWK 518
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKM 295
M E G+ D S+N + G E E + ++++KA P+ TF + ++Y
Sbjct: 519 MGESGVARDRDSFNGVIEGYRQGGQFE--EAIKTYVELEKARFQPDERTFEAVLSVYCTA 576
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G V+++EE R + + + Y ++++Y + ++ Y V L V V+N+
Sbjct: 577 GLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEV--LDEMVTNKVSNI-- 632
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
H ++ + + GD + + W V+ +D
Sbjct: 633 HQVVGKMMK-GDYDD----YSNWQMVEYVFD 658
>gi|449474117|ref|XP_004154078.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like, partial [Cucumis sativus]
Length = 263
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 3/213 (1%)
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRA 189
+W+ G+ + D A ++ LIAKV G+ AE + +P + + V+ ALL YV A
Sbjct: 54 EWLEANGQ-LEFNERDYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVA 112
Query: 190 RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSY 249
AE + +K++D + + YN M+ LY KI + ++ ++ M+++ I+ ++Y
Sbjct: 113 NNVEKAEEVFNKIKDLEFPMSIFAYNQMLVLYKKI-DRRKIADVLLLMEKENIKPCPFTY 171
Query: 250 NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
I + G ME V + MK + + + +T S +A Y+ G KA+ L+ +E
Sbjct: 172 KILIDGKGLSNDISGMEQVVDSMKAE-GIELDVSTLSLLAKHYVSCGLKVKAKAILKEIE 230
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
+ + LL YG + ++EV R+W +
Sbjct: 231 ETNSNGPQWLCRILLPFYGKLQMEDEVRRLWEI 263
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 8/272 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRD---KGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D Y ++ Y +A G + ++K+RD +G+ + Y M+ ++
Sbjct: 256 DIVTYNTMIKGYCKA---GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ EM EKGI++ +++++ + +G + VFE M + K PN ++ +
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM-IRKGSKPNVAIYTVLIDG 371
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
Y K G VE A L R+ D V Y +++ G+ EE ++ R +
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
++ Y ++I L + G ++ E++FEE + D N ++ + K D+A A F
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 412 SIIEEGGKPNST-SWETLAEGHIRERRILEAL 442
+ EE G + ++ L G +E R EAL
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEAL 523
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 7/231 (3%)
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV 274
N ++ + K+ +E+ + +MKE GI +Y+YN ++ S + E VFE+M+
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 275 DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
+ + P+ T++TM Y K GQ +KA E LR +E+R D++ Y +++ +
Sbjct: 251 GR-IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITY---MTMIQACYADS 306
Query: 335 EVYRVWNLYRSVFPGVTNLGYHA---MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
+ LY+ + + HA +I L + G + +FE + S + I
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+++ Y K G+ + A + +I+EG KP+ ++ + G + R+ EAL
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 106/244 (43%), Gaps = 9/244 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y L++ Y ++ +A L+ +M D+G+ + Y+V++ K +E
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC 423
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G+ ++ Y+ + G G ++ E +FE M +K + ++ + + K +
Sbjct: 424 RFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS-EKGCTRDSYCYNALIDAFTKHRK 482
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG--KKEEVYRVWNLY--RSVFPGVTNL 353
V++A +R+E G D+ Y Y + L G + EE ++W++ + + P T
Sbjct: 483 VDEAIALFKRMEEE-EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP--TAA 539
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+ A+ + L G + KI +E + D + M++ K G +A + I
Sbjct: 540 CFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGI 598
Query: 414 IEEG 417
E G
Sbjct: 599 TERG 602
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 149/356 (41%), Gaps = 30/356 (8%)
Query: 102 RSLTKWELCRVVKEL-RKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVA 160
R + E C + EL R R +V+D M +R + A+ + V G
Sbjct: 96 RVVHTTESCNYMLELMRAHGRVGDVAQVFDLM----QRQIIKAN-----VGTFCTVFGAV 146
Query: 161 SAEDFFLSLPDTLKDRRVYGALLNAY---------VRARMRGNAELLIDKMRDKGYAVHS 211
E S P L + G +LNAY V++ A + M G
Sbjct: 147 GVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTV 206
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
Y+V+M + K ++ + V ++ EM+ +G+R +VYSY I + G G E+ +
Sbjct: 207 RTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRK 266
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M+ ++ P+ T + + + G++ A++ ++++ DRV Y LL G G
Sbjct: 267 ME-EEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSG 325
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW-----LSVKSSYD 386
V +WN ++ + Y A + +L ++G ++ +F+E + + SY
Sbjct: 326 DSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSY- 384
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
N ++S ++K F++A FN + G PN + H + L+AL
Sbjct: 385 ----NSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 36/252 (14%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A L+ K + G ++ + YN ++ + D E + SEMK G D ++Y++ L
Sbjct: 750 AHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILD 809
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ G E M + E M +K + T++T+ + +K +++A
Sbjct: 810 AMGKSMRIEDMLKIQEEMH-NKGYKSTYVTYNTIISGLVKSKMLDEA------------- 855
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
++LY + L F T Y ++ L + G+IE E +
Sbjct: 856 ---------INLY------------YQLMSEGF-SPTPCTYGPLLDGLLKDGNIEDAEAL 893
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F+E L + I N++++ Y G+ +K F S++E+G P+ S+ + +
Sbjct: 894 FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCA 953
Query: 435 ERRILEALSCLK 446
+ R+ + LS K
Sbjct: 954 DGRLNDGLSYFK 965
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 126/301 (41%), Gaps = 40/301 (13%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y A ++A + A + D+M+ KG YN +++ ++K ++ + + M
Sbjct: 349 YTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMN 408
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA--------- 289
G + Y++ ++++ G G + K +ELMK K + P+ + +
Sbjct: 409 IHGPTPNGYTHVLFINYHGKSGESLKALKRYELMK-SKGIVPDVVAGNAVLYGLAKTGRL 467
Query: 290 ----------------------TMYIK-MGQVEKAEESLRRVESRITGR---DRVPYHYL 323
TM IK + A+E+++ I R D + + L
Sbjct: 468 GMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSL 527
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ + G+ E ++++ + + T+ Y+ +++ L R G ++ + ++ E S +
Sbjct: 528 IDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNS--N 585
Query: 384 SYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
S+ P I N ++ K G + A S+ G P+ +S+ T+ G ++E R+ EA
Sbjct: 586 SFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEA 645
Query: 442 L 442
Sbjct: 646 F 646
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 129/322 (40%), Gaps = 31/322 (9%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y AL+ V + AE L +M+ G Y++++ K +++ + EM
Sbjct: 769 YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMH 828
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG + +YN +S S+ E + ++LM + +P T+ + +K G
Sbjct: 829 NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMS--EGFSPTPCTYGPLLDGLLKDGN 886
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+E AE + + Y+ LL+ Y G E+V ++ + + + P + + Y
Sbjct: 887 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKS--Y 944
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I +L G + F++ + D NL++ K G ++A + +N + +
Sbjct: 945 TVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEK 1004
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG--------AKSWRPKPVNVINF 467
+G PN ++ +L L K AAE AK W+P NV +
Sbjct: 1005 KGIAPNLYTYNSL------------ILYLGKAGKAAEAGKMYEELLAKGWKP---NVFTY 1049
Query: 468 FKACEEESDMGSKE-AFVALLR 488
S GS E AF A R
Sbjct: 1050 NALIRGYSVSGSPENAFAAYGR 1071
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 124/303 (40%), Gaps = 21/303 (6%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PDTLKDRRV 178
AL+ Y+ M ++G + A +A L +AK + A+ F L PD +
Sbjct: 435 ALKRYELMKSKGIVPDVVAGNAV--LYGLAKTGRLGMAKRVFHELKAMGISPDNI----T 488
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++ +A A + +M + A L N ++ + K +E + E+K
Sbjct: 489 YTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELK 548
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E + +YN L+ G +G +++ + E M + PN T++T+ K G+V
Sbjct: 549 EMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMN-SNSFPPNIITYNTVLDCLCKNGEV 607
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSV--GKKEEVYRVWNLYRSVF-PGVTNLGY 355
A + L + D Y+ + +YG V G+ +E + ++ + V P +
Sbjct: 608 NYALDMLYSMTMNGCMPDLSSYNTV--MYGLVKEGRLDEAFWMFCQMKKVLAPDYATV-- 663
Query: 356 HAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ S R G + E + + E L S D + +M +K +K+ F +I
Sbjct: 664 CTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIA 723
Query: 415 EEG 417
G
Sbjct: 724 SSG 726
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 127/267 (47%), Gaps = 13/267 (4%)
Query: 169 LPDTLKDRRVYGALL--NAYVRARMR------GNAELLIDKMRDKGYAVHSLPYNVMMTL 220
L D ++D+ + L+ N + AR + G A L+ ++R G ++ YN +++
Sbjct: 83 LLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISA 142
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
+ D+ ++ EM R D+++YN +S G G ++ E +F+ + V+K P
Sbjct: 143 CSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKEL-VEKGFQP 201
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
+ T++++ + K G VE+ E + +D + Y+ ++ +YG +G+ + ++
Sbjct: 202 DAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLY 261
Query: 341 NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYV 398
+ R++ + Y ++ SL ++ I K+ EE + P + ++ Y
Sbjct: 262 DEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM--ADAGLKPTLVTFSALICAYA 319
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSW 425
K G D AE F+ ++E G KP+ ++
Sbjct: 320 KSGRQDDAERTFDRMVESGVKPDRLAY 346
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 109/231 (47%), Gaps = 5/231 (2%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+N MM +Y + +D+ ++ M+++ I D+ S+N +++ G + L +
Sbjct: 64 FNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHE 123
Query: 274 VDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
V +A + P+ T++T+ + + ++ A + + D Y+ ++S++G GK
Sbjct: 124 VRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGK 183
Query: 333 KEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
+E ++ + + P Y++++ + A+ GD+E +E++ EE + D
Sbjct: 184 AQEAELMFKELVEKGFQPDAVT--YNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITY 241
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N M+ Y K G D A ++ + G P++ ++ L + + RI EA
Sbjct: 242 NTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 292
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 105/240 (43%), Gaps = 9/240 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A+++ + R AEL+ ++ +KG+ ++ YN ++ + K + + VE + E+
Sbjct: 170 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 229
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G R D +YN + G G + G+++ M+ P+ T++ + KM +
Sbjct: 230 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-IGCTPDAVTYTVLVDSLGKMDR 288
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TNLGY 355
+ +A + L + V + L+ Y G++++ R ++ R V GV L Y
Sbjct: 289 ISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFD--RMVESGVKPDRLAY 346
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR--IANLMMSWYVKEGNFDKAEAFFNSI 413
M+ AR + + ++ +K Y P + ++++ K D+ E +
Sbjct: 347 LVMLDVFARSDETRKLMVLYRAM--IKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM 404
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL A +A++ A+LL ++MR KGY ++ Y++MM +Y + + + E ++S MK
Sbjct: 835 YKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMK 894
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E GI + + +I ++S G+ G ++ E V +K + + +ST+ Y++
Sbjct: 895 EDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLK-SSNLEISTLPYSTVLDAYLR 949
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 114/272 (41%), Gaps = 5/272 (1%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV-MMTLYMKIKEYDEVESMV 234
+++Y +++ R A L+D +++ L V M+ Y K+K + + E+ V
Sbjct: 552 QKIYQSIIYTCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFV 611
Query: 235 SEMK-EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+K E G+ D +N + + G E +F++M + K P + + M I
Sbjct: 612 KGLKQESGV--DRRIWNALIHAYAESGLYEHARAIFDIM-IKKGPLPTVESVNGMMRALI 668
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
G++++ ++ ++ + +L + G EV +++N ++
Sbjct: 669 VDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMH 728
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y MIS L +E + E D + N ++ Y GNFD+ ++SI
Sbjct: 729 LYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSI 788
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+E G +P+ ++ TL + R R E + L
Sbjct: 789 LEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLL 820
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 112/257 (43%), Gaps = 5/257 (1%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
+L A+ +A + + M+ GY + Y +M++L K + +VE MV+EM+ G
Sbjct: 698 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAG 757
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ D+ N L G+ ++ V+ + ++ + P+ T++T+ MY + + E+
Sbjct: 758 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSI-LEAGLEPDEDTYNTLIVMYSRNFRPEEG 816
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
L + R Y LL+ G E+ ++ R+ + YH M+
Sbjct: 817 FTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKI 876
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ E + + +P IA +++M+ Y G+ D+AE NS+ +
Sbjct: 877 YRNARNHSKAEHLLSAM--KEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLE 934
Query: 420 PNSTSWETLAEGHIRER 436
++ + T+ + ++R R
Sbjct: 935 ISTLPYSTVLDAYLRNR 951
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 9/253 (3%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT-LKDR 176
K R AL +YD M G A + +D + K+ ++ A + D LK
Sbjct: 250 KMGRLDLALGLYDEMRAIG--CTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 307
Query: 177 RV-YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
V + AL+ AY ++ + +AE D+M + G L Y VM+ ++ + E ++ +
Sbjct: 308 LVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYR 367
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
M + G + D Y + L++ +++EGV + M+ +NP ++++ IK
Sbjct: 368 AMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNP-----LVISSILIKA 422
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+ + L+R + D +L Y +GK E+ + R P NL
Sbjct: 423 ECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLIS 482
Query: 356 HAMISSLARIGDI 368
I L + G I
Sbjct: 483 ECSIMLLCKNGKI 495
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 123/317 (38%), Gaps = 61/317 (19%)
Query: 162 AEDFFLSLP-DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTL 220
AE+F L ++ DRR++ AL++AY + + +A + D M KG N MM
Sbjct: 607 AENFVKGLKQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRA 666
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV------ 274
+ DE+ +V E+++ I++ + + L + G VFE+MK+
Sbjct: 667 LIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGD------VFEVMKIYNGMKA 720
Query: 275 ----------------------------------DKAVNPNWTTFSTMATMYIKMGQVEK 300
P+ +T+ MY G ++
Sbjct: 721 AGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDR 780
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY----RSVFPGVTNLGYH 356
E + D Y+ L+ +Y + EE + + LY R + P + + Y
Sbjct: 781 TIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTL--LYEMGKRGLTPKLES--YK 836
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++++ + E + +FEE + + I ++MM Y N KAE +++ E+
Sbjct: 837 ILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKED 896
Query: 417 GGKPNSTSWETLAEGHI 433
G +P T+A HI
Sbjct: 897 GIEP------TIATMHI 907
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN ++ +Y + +E +++ EM ++G+ + SY I L++ G E+ + +FE M+
Sbjct: 800 YNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMR 859
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
K N + + M +Y KAE L ++ H L++ YG+ G
Sbjct: 860 T-KGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHP 918
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE-GMEKIFE 376
+E +V N +S ++ L Y ++ + R D G+ K+ E
Sbjct: 919 DEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLE 962
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 82/213 (38%), Gaps = 49/213 (23%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD Y +++ Y + A L D+MR G ++ Y V++ K+ E +
Sbjct: 236 KDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKV 295
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EM + G++ P TFS + Y
Sbjct: 296 LEEMADAGLK------------------------------------PTLVTFSALICAYA 319
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG---V 350
K G+ + AE + R+ DR+ Y +L ++ + +E ++ LYR++
Sbjct: 320 KSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVF---ARSDETRKLMVLYRAMIKDGYKP 376
Query: 351 TNLGYHAMISSLARI-------GDIEGMEKIFE 376
+ Y ++++LA+ G I+ ME +FE
Sbjct: 377 DDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFE 409
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 149/356 (41%), Gaps = 30/356 (8%)
Query: 102 RSLTKWELCRVVKEL-RKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVA 160
R + E C + EL R R +V+D M +R + A+ + V G
Sbjct: 96 RVVHTTESCNYMLELMRAHGRVGDVAQVFDLM----QRQIIKAN-----VGTFCTVFGAV 146
Query: 161 SAEDFFLSLPDTLKDRRVYGALLNAY---------VRARMRGNAELLIDKMRDKGYAVHS 211
E S P L + G +LNAY V++ A + M G
Sbjct: 147 GVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTV 206
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
Y+V+M + K ++ + V ++ EM+ +G+R +VYSY I + G G E+ +
Sbjct: 207 RTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRK 266
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M+ ++ P+ T + + + G++ A++ ++++ DRV Y LL G G
Sbjct: 267 ME-EEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSG 325
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW-----LSVKSSYD 386
V +WN ++ + Y A + +L ++G ++ +F+E + + SY
Sbjct: 326 DSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSY- 384
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
N ++S ++K F++A FN + G PN + H + L+AL
Sbjct: 385 ----NSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 36/252 (14%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A L+ K + G ++ + YN ++ + D E + SEMK G D ++Y++ L
Sbjct: 750 AHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILD 809
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ G E M + E M +K + T++T+ + +K +++A
Sbjct: 810 AMGKSMRIEDMLKIQEEMH-NKGYKSTYVTYNTIISGLVKSKMLDEA------------- 855
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
++LY + L F T Y ++ L + G+IE E +
Sbjct: 856 ---------INLY------------YQLMSEGF-SPTPCTYGPLLDGLLKDGNIEDAEAL 893
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F+E L + I N++++ Y G+ +K F S++E+G P+ S+ + +
Sbjct: 894 FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCA 953
Query: 435 ERRILEALSCLK 446
+ R+ + LS K
Sbjct: 954 DGRLNDGLSYFK 965
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 126/301 (41%), Gaps = 40/301 (13%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y A ++A + A + D+M+ KG YN +++ ++K ++ + + M
Sbjct: 349 YTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMN 408
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA--------- 289
G + Y++ ++++ G G + K +ELMK K + P+ + +
Sbjct: 409 IHGPTPNGYTHVLFINYHGKSGESLKALKRYELMK-SKGIVPDVVAGNAVLYGLAKTGRL 467
Query: 290 ----------------------TMYIK-MGQVEKAEESLRRVESRITGR---DRVPYHYL 323
TM IK + A+E+++ I R D + + L
Sbjct: 468 GMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSL 527
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ + G+ E ++++ + + T+ Y+ +++ L R G ++ + ++ E S +
Sbjct: 528 IDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNS--N 585
Query: 384 SYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
S+ P I N ++ K G + A S+ G P+ +S+ T+ G ++E R+ EA
Sbjct: 586 SFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEA 645
Query: 442 L 442
Sbjct: 646 F 646
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 129/322 (40%), Gaps = 31/322 (9%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y AL+ V + AE L +M+ G Y++++ K +++ + EM
Sbjct: 769 YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMH 828
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG + +YN +S S+ E + ++LM + +P T+ + +K G
Sbjct: 829 NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMS--EGFSPTPCTYGPLLDGLLKDGN 886
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+E AE + + Y+ LL+ Y G E+V ++ + + + P + + Y
Sbjct: 887 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKS--Y 944
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I +L G + F++ + D NL++ K G ++A + +N + +
Sbjct: 945 TVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEK 1004
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG--------AKSWRPKPVNVINF 467
+G PN ++ +L L K AAE AK W+P NV +
Sbjct: 1005 KGIAPNLYTYNSL------------ILYLGKAGKAAEAGKMYEELLAKGWKP---NVFTY 1049
Query: 468 FKACEEESDMGSKE-AFVALLR 488
S GS E AF A R
Sbjct: 1050 NALIRGYSVSGSPENAFAAYGR 1071
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 136/303 (44%), Gaps = 7/303 (2%)
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD------RRVYGALLNAYVRA 189
GE R + + + + V G ED+ + + +K R Y L+ AY R
Sbjct: 408 GEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRC 467
Query: 190 RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSY 249
R NA + ++M G+A YN ++ + + ++ +S+VS+M+ KG + + SY
Sbjct: 468 GSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSY 527
Query: 250 NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
++ L G+ ++ + E V P+W T+ K ++ E++ + V+
Sbjct: 528 SLLLQCYAKGGNIAGIDAI-EKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVK 586
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
+R D V ++ +LS+Y G +V +++ + + Y++++ A+ +
Sbjct: 587 ARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESW 646
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
EKI + S + D N +++ + K+G +A+ + +I +G P ++ TL
Sbjct: 647 EAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLV 706
Query: 430 EGH 432
G+
Sbjct: 707 GGY 709
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 7/289 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L Y RA A +D M KG ++ YN +MT Y I + DE ++
Sbjct: 313 DAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALF 372
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+MK+ G +V +YN L G + T +E + E+ + PN T++TM +
Sbjct: 373 DQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSR--SGCTPNRVTWNTMLAVCG 430
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G + L ++S R Y+ L++ YG G + ++++N S
Sbjct: 431 KRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLT 490
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+A+++ L+R GD + I + + + + +L++ Y K GN +A +
Sbjct: 491 TYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEV 550
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
P+ TL + + RR L ++ AF A+ + P V
Sbjct: 551 YGGTVFPSWVILRTLVIANFKCRR----LGGIEKAFQEVKARGYNPDLV 595
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 140/333 (42%), Gaps = 16/333 (4%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
L ++ ++K L ++ AL + W G A+DA+ L+++ + G
Sbjct: 101 LLPADIPSLLKALELSGHWEWALALLRWAGAEG------AADAS-ALEMVVRALGREGQH 153
Query: 164 DFFLSL-------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
D +L P + D R Y +L+A RA A L ++R +G A + YNV
Sbjct: 154 DAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNV 213
Query: 217 MMTLYMKI-KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ +Y ++ + + + +++ EM+ G+ D ++ + +++C G ++ FE +K
Sbjct: 214 VLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKA- 272
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ P T++ + ++ K G +A L+ +E D V Y+ L Y G EE
Sbjct: 273 RGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEE 332
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMS 395
+ + S Y+ ++++ IG ++ +F++ + N ++
Sbjct: 333 AAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILG 392
Query: 396 WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
K+ F + G PN +W T+
Sbjct: 393 MLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTM 425
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 128/293 (43%), Gaps = 1/293 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ALL + +A A ++ +M G ++ YN + Y + Y+E + M
Sbjct: 281 TYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTM 340
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ + ++YN +++ G+ G ++ +F+ MK V PN T++ + M K +
Sbjct: 341 TSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCV-PNVNTYNFILGMLGKKSR 399
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E L + +RV ++ +L++ G G ++ V RV +S ++ Y+
Sbjct: 400 FTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNT 459
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I++ R G K++ E S + N +++ ++G++ A++ + + +G
Sbjct: 460 LIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKG 519
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA 470
KPN S+ L + + + I + K + SW VI FK
Sbjct: 520 FKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKC 572
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 18/282 (6%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ L+N R A L+D+M ++G+ ++ Y ++ K+ + +M+ +M
Sbjct: 13 FTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMD 72
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E I+ +V Y+ + G+ K + +F M +K + PN T++ M Y G+
Sbjct: 73 ESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMH-EKGIFPNVLTYNCMIDGYCSYGKW 131
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
AE+ LR + R D V + L++ + G V EE+YR L R++FP T + Y
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREM-LRRNIFP--TTITY 188
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMS-----------WYVKEGNFD 404
+MI + +E + +F+ +S S D N ++ + + GN +
Sbjct: 189 SSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVN 248
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
A+ F +I G P+ + TL G ++ +AL K
Sbjct: 249 VAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFK 290
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 120/278 (43%), Gaps = 12/278 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG ++N + +A ++ KM + + + Y+ ++ K + + +++
Sbjct: 44 DAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIF 103
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM EKGI +V +YN + S G E + M +++ ++P+ TFS + ++K
Sbjct: 104 TEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDM-IERNIDPDVVTFSALINAFVK 162
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
G+V AEE R + R + Y ++ + + E+ +++L + P +
Sbjct: 163 EGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIIT 222
Query: 353 LGY---------HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
L +I ++G++ + +F+E +S S D N +++ + G
Sbjct: 223 LNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKL 282
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+KA F + ++ + + G + ++ EA
Sbjct: 283 EKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEA 320
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/310 (18%), Positives = 131/310 (42%), Gaps = 47/310 (15%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y A+++ + A+ + +M +KG + L YN M+ Y ++ + E ++ +M
Sbjct: 82 IYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDM 141
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGST----------------------------------- 262
E+ I DV +++ +++ +G
Sbjct: 142 IERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRL 201
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMAT-----------MYIKMGQVEKAEESLRRVESR 311
E + +F+LM V K +P+ T +T+ + ++G V A++ + + S
Sbjct: 202 EDAKHMFDLM-VSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISN 260
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
D V + LL+ GK E+ ++ +++ + + +I+ + + ++
Sbjct: 261 GVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEA 320
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+F D N+++ +VKEGNF +AE + ++ +G P++ ++ ++ +G
Sbjct: 321 WDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDG 380
Query: 432 HIRERRILEA 441
++ R+ EA
Sbjct: 381 FCKQNRLEEA 390
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 1/166 (0%)
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV 274
N+++ K + DE + + + G+ DV +YNI + +G+ + E ++ L +
Sbjct: 305 NIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIY-LEML 363
Query: 275 DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
K + P+ T+++M + K ++E+A + + + S D V + L+ Y G+ +
Sbjct: 364 CKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVD 423
Query: 335 EVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
+ +++ + Y+A+I ++GD+ G + IFEE +S
Sbjct: 424 DGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVS 469
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 162 AEDFFLS------LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
AED +L +P T+ Y ++++ + + A ++D M +G + + ++
Sbjct: 355 AEDIYLEMLCKGIIPSTV----TYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFS 410
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ Y K D+ + SEM ++G+ D +YN + G + +FE M V
Sbjct: 411 TLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEM-VS 469
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
V P+ TF +M +++K L ++ +
Sbjct: 470 SGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKSV 506
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 159/357 (44%), Gaps = 15/357 (4%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
SVL K G + L ++K L + K AL +D + +G F+L+ A ++
Sbjct: 363 SVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG--FQLNQVSYATLIN 420
Query: 152 LIAKVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+ K+ A + L V Y +++A + ++ A L +M KG +
Sbjct: 421 GVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 480
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+ Y+ ++ + + + E +++EM K I DV +Y I + + G +G ++ + V
Sbjct: 481 DVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVL 540
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+M + V P+ T++T+ Y+ + +V+KA+ + D Y L++ +
Sbjct: 541 AVM-LKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC- 598
Query: 330 VGKKEEVYRVWNLYR-----SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
K + V NL++ ++ P Y +++ L + G I + + +E
Sbjct: 599 --KSKMVDEALNLFKEMHQKNMVPDTVT--YSSLVDGLCKSGRISYVWDLIDEMRDRGQP 654
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D N ++ K G+ DKA A FN + ++G +PN+ ++ L +G + R+ +A
Sbjct: 655 ADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDA 711
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 156 VHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
V+ V A+ F +SL D Y L+N + +++M A L +M K ++
Sbjct: 565 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVT 624
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
Y+ ++ K V ++ EM+++G DV +YN + G +K +F MK
Sbjct: 625 YSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMK 684
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
D+ + PN TF+ + K G+++ A+E + + ++ G Y Y + +YG
Sbjct: 685 -DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTK--GYHLDVYIYNVMIYG 736
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 166/429 (38%), Gaps = 46/429 (10%)
Query: 34 LHQQSAIKHQRQKLPVI--KCSMSQIHSYGTVD---FERRPMIKWNAIFRKLSLMD-NPQ 87
L ++ +K + L V+ C S + +Y T+ F + K +F +SLM P
Sbjct: 213 LCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 272
Query: 88 LGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAA 147
+ S +++ + K +R AL ++ M LS
Sbjct: 273 VHSYNIM------------------INGFCKIKRVDKALNLFKEM-------ILSRFPPI 307
Query: 148 IQ----LDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK 201
IQ LD AK+ ++A L L D L+N + ++ K
Sbjct: 308 IQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAK 367
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
+ +GY ++ N ++ + + ++ +G +L+ SY ++ G
Sbjct: 368 ILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGD 427
Query: 262 TEKMEGVFELM-KVD-KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
T G +L+ K+D + PN +ST+ K V +A + + D V
Sbjct: 428 TR---GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 484
Query: 320 YHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y L+ + VGK +E + N + +++ P V Y ++ +L + G ++ + +
Sbjct: 485 YSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRT--YTILVDALGKEGKVKEAKSVLAV 542
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
L D N +M+ Y+ KA+ FN++ G P+ ++ L G + +
Sbjct: 543 MLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKM 602
Query: 438 ILEALSCLK 446
+ EAL+ K
Sbjct: 603 VDEALNLFK 611
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 169 LPDTLKDRR------VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
L D ++DR Y +L++ + A L +KM+D+G ++ + +++
Sbjct: 644 LIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLC 703
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
K + + + ++ KG LDVY YN+ + QG E+ + M+ + + PN
Sbjct: 704 KGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCI-PNA 762
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESR 311
TF + K + +KAE+ LR++ +R
Sbjct: 763 VTFDIIINALFKKDENDKAEKLLRQMIAR 791
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 105/252 (41%), Gaps = 7/252 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
++ K+ +GY ++ N ++ + E ++ +G +L+ SY ++
Sbjct: 50 VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109
Query: 258 SQGSTEKMEGVFELMKVD-KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
G T + L K+D + PN ++T+ K V +A + + +
Sbjct: 110 RIGDTR--AAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISAN 167
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNL--YRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
V Y L+ + VGK +E + N+ +++ P V Y+ ++ +L + G ++ + +
Sbjct: 168 VVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCT--YNILVDALCKEGKVKEAKSV 225
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
L + + +M Y KA+ FN++ G P+ S+ + G +
Sbjct: 226 LAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCK 285
Query: 435 ERRILEALSCLK 446
+R+ +AL+ K
Sbjct: 286 IKRVDKALNLFK 297
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 122/325 (37%), Gaps = 71/325 (21%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S SVL K G L ++K L + K AL +D + +G F+L+ A
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQG--FQLNQVSYATL 104
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
++ + ++ +A F R++ G L + N E+
Sbjct: 105 INGVCRIGDTRAAIKFL---------RKIDGRL--------AKPNVEM------------ 135
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
YN ++ K + E + SEM KGI +V +Y+ + G ++ G+
Sbjct: 136 ----YNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLL 191
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+M V K +NPN T++ + K G+V++A+ L + + + Y L+ Y
Sbjct: 192 NVM-VLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFL 250
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
V + ++ V+N +S + D+ SY
Sbjct: 251 VYEVKKAQHVFN----------------AMSLMGVTPDVH--------------SY---- 276
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSII 414
N+M++ + K DKA F +I
Sbjct: 277 -NIMINGFCKIKRVDKALNLFKEMI 300
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 148/343 (43%), Gaps = 21/343 (6%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE---DFFLS 168
V+ L + R +HAL VY MN+ L+ + VHG++ A D
Sbjct: 11 VIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKL---------VHGLSKARRLRDAVQV 61
Query: 169 LPDTLKDRRVY-GALLNAYVRARMRGN----AELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
L + + R V L V++ G+ A L+++M +G A +++ Y+ ++ K
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
+ DE ++V M E+G V +YN ++ ++ G E M V + +P+
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQM-VAEGCHPDII 180
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
T++ + + K V + E L V R D V Y ++ G+ + +++
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA---VDIF 237
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+ T + Y+++I R GD++ ++ + + K + D +MS + K G
Sbjct: 238 EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
D A F ++ P+ ++ +L +G E R+ +AL L+
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 340
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 150/365 (41%), Gaps = 33/365 (9%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE--DFFLSL 169
VV+ L R A E+ + M +RG AA + A V G+ E D ++L
Sbjct: 80 VVQSLCLGDRVDDARELVEEMLHRGM--------AANAITYSALVDGLCKCERLDEAVAL 131
Query: 170 PDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
+T+ +R Y +++ + RAR A +++M +G + Y ++ + K
Sbjct: 132 VETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCK 191
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
++ ++ E+ +G D+ +Y+ + G +FE M + P
Sbjct: 192 SRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM----SCAPTAI 247
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-- 341
T++++ Y + G +++A L ++ D V Y L+S + +G+ ++ Y ++
Sbjct: 248 TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQM 307
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVK 399
+ + P V + +++ L G +E ++ EE + P I N ++ Y K
Sbjct: 308 VANKLSPDVVT--FTSLVDGLCGEGRMEDALELLEEI--TRRGCPPTIYTYNCVVDGYCK 363
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
KAE G PN+ ++ L G R R +AL L +EG P
Sbjct: 364 ANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD-QLNSEGG----P 418
Query: 460 KPVNV 464
P +V
Sbjct: 419 CPTSV 423
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 133/332 (40%), Gaps = 18/332 (5%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKD 175
K R LE+ + RG F + +D + K + A D F +S T
Sbjct: 191 KSRDVGRGLELLGEVTRRG--FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI- 247
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
Y +L+ Y RA A L+ KM D A + Y +M+ + K+ D+ +
Sbjct: 248 --TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQ 305
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYI 293
+M + DV ++ + +G +ME EL++ + P T++ + Y
Sbjct: 306 QMVANKLSPDVVTFTSLVDGLCGEG---RMEDALELLEEITRRGCPPTIYTYNCVVDGYC 362
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTN 352
K QV KAEE + SR + V Y+ L++ G+ ++ + + L P T+
Sbjct: 363 KANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTS 422
Query: 353 LGYHAMI-SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY--VKEGNFDKAEAF 409
+ +A+I +L R G + + +EE ++ Y P A + K +A
Sbjct: 423 VAMYAIILDALCRDGRTDDAVQFYEEM--IQRGYVPAAATFATVVFALCKAHQPQQAHEL 480
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+I+ G P + + + + R I +A
Sbjct: 481 LEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 12/292 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L Y RA A +D M KG ++ YN +MT Y + + DE ++
Sbjct: 314 DAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALF 373
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+MK+ G +V +YN+ L G + T +E + E+ + PN T++TM +
Sbjct: 374 DQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSR--SGCTPNRVTWNTMLAVCG 431
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV--FPGVT 351
K G + L + S R Y+ L++ YG G + ++++N S P +T
Sbjct: 432 KRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCIT 491
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y+A+++ L+R GD + I + + + + +L++ Y K GN A N
Sbjct: 492 T--YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIEN 549
Query: 412 SIIEEGGK-PNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
+ G P+ TL + + RR L ++ AF A+ + P V
Sbjct: 550 EVYGSGAVFPSWVILRTLVIANFKCRR----LDGMETAFQEVKARGYNPDLV 597
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 145/329 (44%), Gaps = 15/329 (4%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V+ L K R+ LE+ GE R + + + + V G ED+ + +
Sbjct: 391 VLGMLGKKSRFTVMLEML------GEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLE 444
Query: 172 TLKD------RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
++ R Y L+ AY R R NA + ++M G+ YN ++ + +
Sbjct: 445 GMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQG 504
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++ +S+VS+M+ KG + + SY++ L G+ + + + AV P+W
Sbjct: 505 DWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVIL 564
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
T+ K +++ E + + V++R D V ++ +LS+Y G + V++ +
Sbjct: 565 RTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKR 624
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNF 403
+ Y++++ A+ + EKI + L + P + N +++ + K+G
Sbjct: 625 SGLSPDLITYNSLMDMYAKCSESWEAEKILNQ-LKCSQTMKPDVVSYNTVINGFCKQGLV 683
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+A+ + ++ +G P + ++ TL G+
Sbjct: 684 KEAQRVLSEMVADGMAPCAVTYHTLVGGY 712
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 145/335 (43%), Gaps = 20/335 (5%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
L + ++ ++K L ++ AL + W G A+DA+ L+++ + G
Sbjct: 102 LLRADITSLLKALELSGHWEWALALLRWAGKEG------AADAS-ALEMVVRALGREGQH 154
Query: 164 DFFLSL-------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
D +L P + D R Y +L+A RA A L ++R +G A + YNV
Sbjct: 155 DAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNV 214
Query: 217 MMTLYMKI-KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ +Y ++ + + + +++ EM+ G+ D ++ + +++C G ++ FE +K
Sbjct: 215 VLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKA- 273
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ P T++ + ++ K G +A L +E D V Y+ L Y G EE
Sbjct: 274 RGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEE 333
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLM 393
R + S Y+ ++++ +G ++ +F++ K+ + P + NL+
Sbjct: 334 AARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQM--KKTGFVPNVNTYNLV 391
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ K+ F + G PN +W T+
Sbjct: 392 LGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTM 426
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 121/259 (46%), Gaps = 5/259 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ALL + +A A ++ +M G ++ YN + Y + ++E + M
Sbjct: 282 TYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTM 341
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ + ++YN +++ G+ G ++ +F+ MK V PN T++ + M K +
Sbjct: 342 ASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFV-PNVNTYNLVLGMLGKKSR 400
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E L + +RV ++ +L++ G G ++ V RV RS ++ Y+
Sbjct: 401 FTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNT 460
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIE 415
+I++ R G K++ E S + + P I N +++ ++G++ A++ + +
Sbjct: 461 LIAAYGRCGSRTNAFKMYNEMTS--AGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRT 518
Query: 416 EGGKPNSTSWETLAEGHIR 434
+G KPN S+ L + + +
Sbjct: 519 KGFKPNEQSYSLLLQCYAK 537
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 114/277 (41%), Gaps = 13/277 (4%)
Query: 135 RGERFRLSASDAAIQLDLIAK---VHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARM 191
R + F+ + ++ L AK V G+A+ E+ + L+ A + R
Sbjct: 517 RTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRR 576
Query: 192 RGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
E +++ +GY + +N M+++Y K Y + + +K G+ D+ +YN
Sbjct: 577 LDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNS 636
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ + + E + +K + + P+ +++T+ + K G V++A+ L + +
Sbjct: 637 LMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVAD 696
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
V YH L+ Y S+ +++ R V + G M + R+ +
Sbjct: 697 GMAPCAVTYHTLVGGYSSL-------EMFSEAREVIGYMVQHGLKPMELTYRRVVESYCR 749
Query: 372 EKIFEE---WLSVKSSYDPRIANLMMSWYVKEGNFDK 405
K FEE +LS S D + Y+++ F +
Sbjct: 750 AKRFEEARGFLSEVSETDLDFDKKALEAYIEDAQFGR 786
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 130/256 (50%), Gaps = 1/256 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL++Y + L+ +M+ +G A + + YNV++ K E+++ + ++ EM
Sbjct: 543 YNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEML 602
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G+++ Y+YN + ++G + + E M V K +P T+++ K+G++
Sbjct: 603 KTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEM-VLKGASPTVATYNSFIYGLCKLGRM 661
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
A + L + + D V Y+ L+ Y +G + + +++ RS++ T + Y+ +
Sbjct: 662 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 721
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ L R G++E +++ E ++ + D ++++ K G+ A+ FF+ ++ EG
Sbjct: 722 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 781
Query: 419 KPNSTSWETLAEGHIR 434
+ +S ++ T G ++
Sbjct: 782 ELDSYAYATRIVGELK 797
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 5/167 (2%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LPD + Y L+ Y R A LL D++R + YN ++ + E +
Sbjct: 677 LPDVVS----YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 732
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ + EM +GI D+ +Y I ++ GS + F+ M + + + + ++T
Sbjct: 733 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM-LHEGLELDSYAYATR 791
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+K+G +A + ++ D + Y+ ++ +G EE
Sbjct: 792 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEE 838
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++A + A+ L+ M +G + + YN +M Y I E + M M
Sbjct: 223 YTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMV 282
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+KG+ +VYSYNI + C S+ E M + E++ K + PN T+S++ + K+G+
Sbjct: 283 QKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLH--KNMVPNTVTYSSLIDGFCKLGR 340
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTN 352
+ A + L+ + R D V Y SL ++ K + + + L+ R + P
Sbjct: 341 ITSALDLLKEMYHRGQPADVVTYT---SLLDALCKNQNLDKATALFMKMKERGIQP--NK 395
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y A+I L + G + +K+F+ L + N+M+S KEG D+A A +
Sbjct: 396 YTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSK 455
Query: 413 IIEEGGKPNSTSWETL 428
+ E G P++ ++E +
Sbjct: 456 MEENGCIPDAVTFEII 471
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 150/353 (42%), Gaps = 11/353 (3%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S +VL K G L ++K L K +L +D + +G F++ A
Sbjct: 64 SFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQG--FQMDQVSYATL 121
Query: 150 LDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
L+ + K+ SA + D T + +Y +++ + ++ A L +M +G
Sbjct: 122 LNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ + Y+ ++ + + E +++EM K I +VY+Y I + + +G ++ +
Sbjct: 182 FPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKN 241
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ +M + V PN +++T+ Y +G+V+ A++ + + + Y+ ++
Sbjct: 242 LLAVM-TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMID-- 298
Query: 328 GSVGKKEEVYRVWNLYRSVFPG--VTN-LGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
+ K + V NL R V V N + Y ++I ++G I + +E
Sbjct: 299 -RLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQP 357
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
D ++ K N DKA A F + E G +PN ++ L +G + R
Sbjct: 358 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGR 410
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 143/348 (41%), Gaps = 52/348 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y LLN + +A L+ + D+ + + YN ++ K K +E +
Sbjct: 114 DQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLY 173
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM +GI +V +Y+ + G + G+ M + K +NPN T++ + K
Sbjct: 174 SEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEM-ILKNINPNVYTYTILMDALCK 232
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+V++A+ L +V KE V P V +
Sbjct: 233 EGKVKEAKNLL-----------------------AVMTKE----------GVKPNVVS-- 257
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNS 412
Y+ ++ IG+++ +++F V+ +P + N+M+ K D+A
Sbjct: 258 YNTLMDGYCLIGEVQNAKQMFHTM--VQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLRE 315
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINF---FK 469
++ + PN+ ++ +L +G + RI AL LK + R +P +V+ +
Sbjct: 316 VLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMY-------HRGQPADVVTYTSLLD 368
Query: 470 ACEEESDMGSKEAFVALLRQPGYRKEK-DYMSLI-GLTDEAVAENNKK 515
A + ++ A +++ G + K Y +LI GL +N +K
Sbjct: 369 ALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQK 416
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 44/260 (16%)
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-C-------------- 256
+ +N ++ +K+K Y S+ +M+ KGI D+++ NI ++ C
Sbjct: 11 MEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGK 70
Query: 257 ----GSQGSTEKMEGVFELMKV-----------DKAVNPNW----TTFSTMATMYIKMGQ 297
G Q +T + + + + + DK V + +++T+ K+G+
Sbjct: 71 ILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGE 130
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTN 352
A + LR +E R T + V Y+ ++ + K + V ++LY R +FP V
Sbjct: 131 TRSALKLLRMIEDRSTRPNVVMYNTIID---GLCKDKLVNEAYDLYSEMDARGIFPNV-- 185
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y +I G + + E + + + ++M KEG +A+
Sbjct: 186 ITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAV 245
Query: 413 IIEEGGKPNSTSWETLAEGH 432
+ +EG KPN S+ TL +G+
Sbjct: 246 MTKEGVKPNVVSYNTLMDGY 265
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 119/276 (43%), Gaps = 9/276 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D L+N + + ++ K+ GY +++ N +M E +
Sbjct: 44 DLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFH 103
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++ +G ++D SY L+ G T + +++ D++ PN ++T+ K
Sbjct: 104 DKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIE-DRSTRPNVVMYNTIIDGLCK 162
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
V +A + +++R + + Y L+ + G+ E + + N + +++ P V
Sbjct: 163 DKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYT 222
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFF 410
Y ++ +L + G ++ + + + K P + N +M Y G A+ F
Sbjct: 223 --YTILMDALCKEGKVKEAKNLLA--VMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMF 278
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++++++G PN S+ + + + +R+ EA++ L+
Sbjct: 279 HTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLR 314
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKD 175
K R AL++ M +RG+ + + LD + K + A F+ + + +
Sbjct: 337 KLGRITSALDLLKEMYHRGQPADVVTYTSL--LDALCKNQNLDKATALFMKMKERGIQPN 394
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ Y AL++ + NA+ L + KG ++ YNVM++ K DE +M S
Sbjct: 395 KYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKS 454
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
+M+E G D ++ I + S + +K E + M
Sbjct: 455 KMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 162/378 (42%), Gaps = 45/378 (11%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
T + C VVK + + ++ ALE+Y+ + + + + +A A L ++ K + A
Sbjct: 193 FTPTDFCFVVKSVGQ-SSWQRALELYECLTMQ-QWYATNARMVATILSVLGKANQEGIAV 250
Query: 164 DFFLSLPDTLKDR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
+ F + D +VY A++ Y R + + MR++G + +N ++
Sbjct: 251 EIFAKAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLIN--A 308
Query: 223 KIKEYDEVESMVSEMKEK----GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
K+K V + E+ ++ G+R D+ +YN +S+C + + ++ GVF M+ ++
Sbjct: 309 KVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRC- 367
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESR------IT------------------- 313
P+ T++ M ++Y + G KAE +++S +T
Sbjct: 368 QPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRD 427
Query: 314 ----------GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLA 363
G+D + Y+ ++ +YG G+ +E R++ +S + Y +I L
Sbjct: 428 ISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLG 487
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
+ IE K+ E L + ++ Y K G +AE FN + E G K +
Sbjct: 488 KASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHL 547
Query: 424 SWETLAEGHIRERRILEA 441
++ + + +R I +A
Sbjct: 548 AYSVMLDFFLRFNEIKKA 565
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 1/243 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A+++ Y R AE L +K++ G++ ++ YN ++ + K ++V +
Sbjct: 370 DLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDIS 429
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM + G D +YN + G G ++ ++ MK NP+ T++ + + K
Sbjct: 430 EEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMK-SSGRNPDAVTYTVLIDLLGK 488
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++E+A + + + Y L+ Y VG++ E +N R +L
Sbjct: 489 ASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLA 548
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y M+ R +I+ +++E + + D + +M+ V+E D E
Sbjct: 549 YSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTK 608
Query: 415 EEG 417
E G
Sbjct: 609 ELG 611
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ Y R L+ KM+ G Y M+ + K + YD+ E +
Sbjct: 998 DEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELF 1057
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E++ G +LD Y++ + + G +K E + E+MK + + PN T + Y K
Sbjct: 1058 EELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMK-EAGIEPNTATMHLLMVSYGK 1116
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
GQ E+A+ L+ + + D +PY ++ Y
Sbjct: 1117 SGQPEEADRILKNLRTMGAVLDTLPYSSVIDAY 1149
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 36/247 (14%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
+L A+ +A + + + M+ GY Y +M+ L + K +V M+SEM E G
Sbjct: 900 MLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAG 959
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ D+ +N L S + M ++++++ D + P+ T++T+ TMY + +
Sbjct: 960 FKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQ-DAGLAPDEETYNTLITMYCR---DHRP 1015
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
EE L + H + SL + K + YR +MI++
Sbjct: 1016 EEGLSLM------------HKMKSL--GLEPKRDTYR------------------SMIAA 1043
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
++ + E++FEE S D +LMM Y G+ KAE + E G +PN
Sbjct: 1044 FSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPN 1103
Query: 422 STSWETL 428
+ + L
Sbjct: 1104 TATMHLL 1110
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 130/319 (40%), Gaps = 9/319 (2%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKD 175
K R+ AL +Y M + G A + +DL+ K + A + D
Sbjct: 453 KHGRHDEALRLYRDMKSSGRN--PDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPT 510
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
Y AL+ AY + R AE ++MR+ G L Y+VM+ +++ E + ++
Sbjct: 511 LHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQ 570
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM E G D Y + L + + + +E V + K ++NP+ ++++ +K
Sbjct: 571 EMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELGSMNPH-----DISSVLVKG 625
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G + + L+ S DR + ++S Y S + E + +R P +
Sbjct: 626 GCYDHGAKMLKVAISNGYELDREIFLSIMSSYSSSARYSEACELVEFFREHAPDDIQMIT 685
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
A+I L + G ++ + + + + + ++ K FD A F+ +
Sbjct: 686 EALIIILCKAGKLDAALEEYRSRGGLGTFRSCTMYESLIHECTKSEQFDIASQLFSDMRF 745
Query: 416 EGGKPNSTSWETLAEGHIR 434
G +P+ ++++ + R
Sbjct: 746 NGVEPSECLYQSMVSVYCR 764
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +++ ++L Y N ++ ++D G A YN ++T+Y + +E S++
Sbjct: 963 DLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLM 1022
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+MK G+ +Y +++ Q ++ E +FE ++ + + + + M MY
Sbjct: 1023 HKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSN-GYKLDRSFYHLMMKMYRT 1081
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G +KAE L ++ + H L+ YG G+ EE R+ R++ + L
Sbjct: 1082 SGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLP 1141
Query: 355 YHAMISSLARIGDIE-GMEKIFE 376
Y ++I + + GD + G+EK+ E
Sbjct: 1142 YSSVIDAYLKKGDAKAGIEKLTE 1164
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 36/230 (15%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN MM +Y + +++V M + M+E+G D+ S+N +++ +T + L +
Sbjct: 267 YNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDE 326
Query: 274 VDK-AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
V K + P+ T++T+ + + +++A +ES D
Sbjct: 327 VGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPD---------------- 370
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+W Y+AMIS R G E +FE+ S S D N
Sbjct: 371 ------LWT-------------YNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNS 411
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ + KEGN +K +++ G + ++ T+ + + R EAL
Sbjct: 412 LLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEAL 461
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 6/134 (4%)
Query: 351 TNLGYHAMISSLARIGDIEGME-KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
TN A I S+ + EG+ +IF + SV + ++ N MM Y + GNF+K
Sbjct: 228 TNARMVATILSVLGKANQEGIAVEIFAKAESVIAD-TVQVYNAMMGVYARNGNFEKVNEM 286
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFK 469
FN + E G +P+ S+ TL ++ + L+ G RP +
Sbjct: 287 FNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAI--ELLDEVGKFGLRPDIITYNTLIS 344
Query: 470 ACEEESDMGSKEAF 483
AC ES++ KEA
Sbjct: 345 ACSRESNL--KEAI 356
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 130/256 (50%), Gaps = 1/256 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL++Y + L+ +M+ +G A + + YNV++ K E+++ + ++ EM
Sbjct: 237 YNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEML 296
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G+++ Y+YN + ++G + + E M V K +P T+++ K+G++
Sbjct: 297 KTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM-VLKGASPTVATYNSFIYGLCKLGRM 355
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
A + L + + D V Y+ L+ Y +G + + +++ RS++ T + Y+ +
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ L R G++E +++ E ++ + D ++++ K G+ A+ FF+ ++ EG
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Query: 419 KPNSTSWETLAEGHIR 434
+ +S ++ T G ++
Sbjct: 476 ELDSYAYATRIVGELK 491
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 139/323 (43%), Gaps = 16/323 (4%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LPD + Y L+ Y R A LL D++R + YN ++ + E +
Sbjct: 371 LPDVVS----YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 426
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ + EM +GI D+ +Y I ++ GS + F+ M + + + + ++T
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM-LHEGLELDSYAYATR 485
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
+K+G +A + ++ D + Y+ ++ +G EE + L + V
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASEL--LQKMVSD 543
Query: 349 GVTN--LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
GV + Y ++I + G + +IF E LS + +++ + +G ++A
Sbjct: 544 GVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERA 603
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVIN 466
+F+ + E+G PN ++ +L G + RR+ +A + FA K P N +
Sbjct: 604 FIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN----FFAEMVEKGIFP---NKYS 656
Query: 467 FFKACEEESDMGSKEAFVALLRQ 489
+ E +MG+ + ++L +Q
Sbjct: 657 YTILINENCNMGNWQEALSLYKQ 679
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 113/256 (44%), Gaps = 5/256 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N + A+ D+M +G + S Y + +K+ + S+
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQ 502
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM KG D+ YN+ + G+ E+ + + M V V P++ T++++ +++
Sbjct: 503 EEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKM-VSDGVIPDYVTYTSIIHAHLE 561
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
G++ K E + S+ V Y L+ + G+ E + ++ + + P V
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNV-- 619
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+++I+ L ++ ++ F E + + ++++ GN+ +A + +
Sbjct: 620 ITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQ 679
Query: 413 IIEEGGKPNSTSWETL 428
+++ G +P+S + L
Sbjct: 680 MLDRGVQPDSCTHSAL 695
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 77/175 (44%), Gaps = 3/175 (1%)
Query: 172 TLKDRRVYGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ D Y ++++A++ R+R E+ + M KG + Y V++ + +
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYE-MLSKGLTPSVVTYTVLIHGHAGKGRLERA 603
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
SEM+EKGI +V +YN ++ ++ F M V+K + PN +++ +
Sbjct: 604 FIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM-VEKGIFPNKYSYTILIN 662
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
MG ++A +++ R D + LL G K + V ++ +L S
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLDS 717
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 8/272 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRD---KGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D Y ++ Y +A G + ++K+RD +G+ + Y M+ ++
Sbjct: 238 DIVTYNTMIKGYCKA---GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 294
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ EM EKGI++ +++++ + +G + VFE M + K PN ++ +
Sbjct: 295 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM-IRKGSKPNVAIYTVLIDG 353
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
Y K G VE A L R+ D V Y +++ G+ EE ++ R +
Sbjct: 354 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 413
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
++ Y ++I L + G ++ E++FEE + D N ++ + K D+A A F
Sbjct: 414 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 473
Query: 412 SIIEEGGKPNST-SWETLAEGHIRERRILEAL 442
+ EE G + ++ L G +E R EAL
Sbjct: 474 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEAL 505
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 7/231 (3%)
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV 274
N ++ + K+ +E+ + +MKE GI +Y+YN ++ S + E VFE+M+
Sbjct: 173 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 232
Query: 275 DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
+ + P+ T++TM Y K GQ +KA E LR +E+R D++ Y +++ +
Sbjct: 233 GR-IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITY---MTMIQACYADS 288
Query: 335 EVYRVWNLYRSVFPGVTNLGYHA---MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
+ LY+ + + HA +I L + G + +FE + S + I
Sbjct: 289 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 348
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+++ Y K G+ + A + +I+EG KP+ ++ + G + R+ EAL
Sbjct: 349 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 399
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 106/244 (43%), Gaps = 9/244 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y L++ Y ++ +A L+ +M D+G+ + Y+V++ K +E
Sbjct: 346 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC 405
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G+ ++ Y+ + G G ++ E +FE M +K + ++ + + K +
Sbjct: 406 RFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS-EKGCTRDSYCYNALIDAFTKHRK 464
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG--KKEEVYRVWNLY--RSVFPGVTNL 353
V++A +R+E G D+ Y Y + L G + EE ++W++ + + P T
Sbjct: 465 VDEAIALFKRMEEE-EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP--TAA 521
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+ A+ + L G + KI +E + D + M++ K G +A + I
Sbjct: 522 CFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGI 580
Query: 414 IEEG 417
E G
Sbjct: 581 TERG 584
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 134/298 (44%), Gaps = 3/298 (1%)
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
A++ +D K V A LP + Y +LL++Y R R L+ +M
Sbjct: 151 ASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEME 210
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
++G Y +++ + + +VE++ EMK K + DVY Y+ +++ G+
Sbjct: 211 NRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVR 270
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+ VF+ V V PN T+ + + K+GQ+E AE L ++ R G +++ ++ +
Sbjct: 271 RASEVFDEC-VGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM 329
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ Y G E+ + + + + Y+ + L R+ +E +K+
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ + ++S + KEG+ +A F + +G +P+ ++ + +G+I+ I EA
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREA 447
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 127/259 (49%), Gaps = 11/259 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ R YGAL+N + + AE+L+ M+ +G + + +N M+ Y + ++ +
Sbjct: 287 NERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIK 346
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--DKAVNPNWTTFSTMATMY 292
+ M++ GI LD+Y+YN +CG +ME +L+ + +K V PN+ +++T+ +++
Sbjct: 347 AVMEKMGIELDIYTYNTL--ACG-LCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIH 403
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPG 349
K G + +A R +E + + V Y+ ++ Y GS+ ++ E ++ + + P
Sbjct: 404 AKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSI-REAERFKKEMEKKGLVPD 462
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y ++ G ++ ++FEE + + ++S KEG ++A
Sbjct: 463 IYT--YAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQL 520
Query: 410 FNSIIEEGGKPNSTSWETL 428
++ ++ G P+ T + L
Sbjct: 521 YDDMLAAGLTPDDTLYSVL 539
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 128/274 (46%), Gaps = 13/274 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D YGA++N + RG+ +L L+ KM + YN ++ K K D+
Sbjct: 219 DLVTYGAVVNGLCK---RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAF 275
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ ++M+ KGIR DV++YN +S + G + M +++ +NPN TFS +
Sbjct: 276 ALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNM-IERKINPNVVTFSALIDA 334
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPG 349
++K G++ +AE+ + R D Y L++ + + +E ++ L + FP
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 350 VTNLGYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
V Y+ +I + + EGME +F E + N ++ + G+ D A+
Sbjct: 395 VVT--YNTLIKGFCKAKRVEEGME-LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F ++ +G P+ ++ L +G + ++ +AL
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 127/266 (47%), Gaps = 9/266 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+LLN Y ++ +A L+D+M + GY ++ +N ++ + E ++V +M ++
Sbjct: 155 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQR 214
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G + D+ +Y ++ +G + + + M+ K + + ++T+ K ++
Sbjct: 215 GCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHIDD 273
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAM 358
A ++E++ D Y+ L+S + G+ + R+ + + R + P V + A+
Sbjct: 274 AFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVT--FSAL 331
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEE 416
I + + G + EK+++E +K S DP I +++ + D+A+ F +I +
Sbjct: 332 IDAFVKEGKLVEAEKLYDEM--IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
PN ++ TL +G + +R+ E +
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGM 415
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 161/376 (42%), Gaps = 22/376 (5%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
++ + A+ L + L + S+L EKG ++ L K++ A ++
Sbjct: 220 LVTYGAVVNGLCKRGDIDL-ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALF 278
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV------YGALL 183
+ M +G R D LI+ + D L + + +R++ + AL+
Sbjct: 279 NKMETKGIR-----PDVFTYNSLISCLCNYGRWSDASRLLSNMI-ERKINPNVVTFSALI 332
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR 243
+A+V+ AE L D+M + Y+ ++ + DE + M M K
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 244 LDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
+V +YN + C ++ E ME E+ + + + N T++T+ + G + A+
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQ--RGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVF-PGVTNLGYHAMIS 360
+ +++ S D + Y LL GK E+ V+ L +S P + Y+ MI
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT--YNIMIE 508
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSY-DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ + G +E +F LS+K + I M+S + ++G ++A+A F + E+G
Sbjct: 509 GMCKAGKVEDGWDLFCS-LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 420 PNSTSWETLAEGHIRE 435
P+S + TL +R+
Sbjct: 568 PDSGCYNTLIRARLRD 583
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 16/265 (6%)
Query: 176 RRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLP------YNVMMTLYMKIKE 226
R VY + + R ++ NA L L D + G V S P +N +++ K+K+
Sbjct: 36 RGVYFSAASYDYREKLSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKK 95
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+D V S+ M+ I D+YSYNI ++ C + + ++MK+ P+ T
Sbjct: 96 FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKL--GYEPDIVTL 153
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL-SLYGSVGKKEEVYRVWNLY- 343
S++ Y ++ A + ++ D V ++ L+ L+ E V V +
Sbjct: 154 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQ 213
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
R P + Y A+++ L + GDI+ + ++ K D I N ++ K +
Sbjct: 214 RGCQPDLVT--YGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHI 271
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETL 428
D A A FN + +G +P+ ++ +L
Sbjct: 272 DDAFALFNKMETKGIRPDVFTYNSL 296
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 101/236 (42%), Gaps = 2/236 (0%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D + Y L+ + +A+ L +M +G +++ YN ++ + + D
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ + +M G+ D+ +Y+I L G EK VFE ++ K + P+ T++ M
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK-MEPDIYTYNIMIE 508
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
K G+VE + + + + + Y ++S + G KEE ++ +
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
+ Y+ +I + R GD ++ +E S D +++++ + +G +K+
Sbjct: 569 DSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKS 623
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 148/333 (44%), Gaps = 27/333 (8%)
Query: 114 KELRKFRRYKHALEVYDWMNNR-GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT 172
K + +KH Y M R G + +QL K+ G++ ED F+
Sbjct: 61 KSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQL---MKLEGISCNEDLFV----- 112
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
++NAY RA + A ++ + G YN ++ + ++ +
Sbjct: 113 --------IVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMING 164
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ + MK GI L+VY+YN+ L + + + M + P+ +++T+ +
Sbjct: 165 IYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCI-PDAVSYTTVVSSM 223
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGV 350
++G+VE+A E R++S + Y+ L++ + K EEV+ ++N + P V
Sbjct: 224 CRLGKVEEARELSMRIKSFVP-----VYNALINGFCREHKMEEVFELFNEMAVEGIDPDV 278
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y +I++L+ +G++E + + S + +M Y G +A +
Sbjct: 279 --ITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLW 336
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
N +I+EG +PN+ ++ TL G +++EA+S
Sbjct: 337 NRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVS 369
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 107/266 (40%), Gaps = 40/266 (15%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN ++ + + + +EV + +EM +GI DV +Y+ +++ G+ E V M
Sbjct: 246 YNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMF 305
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ + +PN TF+++ Y G++ +A + R+ + + V Y+ L+ S GK
Sbjct: 306 L-RGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKM 364
Query: 334 EEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
E V VFP T Y +I A+ GD+ G +I+ + ++ + +
Sbjct: 365 VEAVSVSQKMERNGVFPNETT--YSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYT 422
Query: 392 LMMSWYVKEGNFDKA---------------EAFFNSII--------------------EE 416
M+ + F+ A FN+ I +
Sbjct: 423 CMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQY 482
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G PN T++ + +G +R EAL
Sbjct: 483 GCAPNVTTYNEVLDGLFNAKRTREAL 508
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 66/371 (17%), Positives = 136/371 (36%), Gaps = 19/371 (5%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
+I ++ + LS M N ++ A VL G S ++K R AL+++
Sbjct: 278 VITYSTVINTLSEMGNVEMALA-VLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLW 336
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRR--------VYGA 181
+ M G A + I HG+ S ++ + K R Y
Sbjct: 337 NRMIQEGSEPNTVAYNTLI--------HGLCSYGKMVEAVSVSQKMERNGVFPNETTYST 388
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L++ + +A A + +KM G + + Y M+ + + ++ ++ M
Sbjct: 389 LIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGN 448
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ ++N ++ G TE V M+ PN TT++ + + +A
Sbjct: 449 CPPNTITFNTFIKGLCCSGKTEWAMKVLNQMR-QYGCAPNVTTYNEVLDGLFNAKRTREA 507
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
+ + +E + V Y+ +LS + G + ++ ++ Y+ +I +
Sbjct: 508 LQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYA 567
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE-GNFDKAEAFFNSIIEEGGKP 420
+ G+++ ++ + Y + W V D+A + +I EG P
Sbjct: 568 YCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICP 627
Query: 421 NSTSWETLAEG 431
N +W L G
Sbjct: 628 NRATWNALVRG 638
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 24/191 (12%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
++++MR G A + YN ++ K E +V E++E I+ ++ +YN LS
Sbjct: 475 VLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFC 534
Query: 258 SQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
G +G ++ + P+ T++T+ Y K G+V+ A + + R+ + G
Sbjct: 535 HAG---MFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGY 591
Query: 316 DRVPYHYLLSLYGS---VGKKEEVYRV--------------WN-LYRSVFPGVTNLGYHA 357
V + Y L+G +G E V + WN L R +F + +LG
Sbjct: 592 PDV-FTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPIH 650
Query: 358 MISSLARIGDI 368
++ ++ G +
Sbjct: 651 IVDNILANGKV 661
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 126/276 (45%), Gaps = 7/276 (2%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LPD + Y ++N + + A L+ +M +S Y ++M K +
Sbjct: 7 LPDIVS----YNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVE 62
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
E ++ EMK KG+ +DV Y+ +S S+G ++ + +F+ M ++K ++PN +S +
Sbjct: 63 EAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEM-LEKGISPNVVVYSCL 121
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
+ K G +A L + R D Y ++ G+ + +++L
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ + Y+ +I+ L + G I KIFE L + N ++ G D+A
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241
Query: 409 FFNSIIEEGG--KPNSTSWETLAEGHIRERRILEAL 442
F+S++E+G +P+ ++ T+ +G +E R+ +A+
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAV 277
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 131/289 (45%), Gaps = 11/289 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D VY L++ + + L D+M +KG + + + Y+ ++ + K + E +++
Sbjct: 79 DVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVL 138
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M E+GI+ DVY+Y + G K +F+LM +K P+ T++ + K
Sbjct: 139 HTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM-TEKGEEPSTVTYNVLINGLCK 197
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS----VFPGV 350
G + A + + + + V Y+ L+ + GK +E ++++ V P V
Sbjct: 198 EGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDV 257
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ ++ +I L + G ++ +I++ + S + ++++ Y+K G DKA +
Sbjct: 258 --ITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELW 315
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
+ + G P+ST++ + +G + + L+ KG F+ P
Sbjct: 316 KRVHKLGLVPSSTTYSVMIDGFCK----MHMLNFAKGLFSRMKISGLSP 360
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 140/357 (39%), Gaps = 56/357 (15%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K R + AL+++D M +GE P
Sbjct: 156 MIGGLCKDGRARKALDLFDLMTEKGEE-------------------------------PS 184
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
T+ Y L+N + G+A + + M +KG + + YN ++ + DE
Sbjct: 185 TV----TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240
Query: 232 SMVSEMKEKG--IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ S + E G + DV ++N + +G +K +++ M +++ N T +
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM-IERGSFGNLFTCHILI 299
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
YIK G ++KA E +RV Y ++ + + + N + +F
Sbjct: 300 GEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM-------HMLNFAKGLFSR 352
Query: 350 V-------TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ T Y+ +++SL + +E ++F+E D N+M+ +K G+
Sbjct: 353 MKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGD 412
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
A+ N + + G P++ ++ + + ++ EA KGAF + A P
Sbjct: 413 IHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEA----KGAFDSMIASGITP 465
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 95/246 (38%), Gaps = 26/246 (10%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI-----------QLDLIAKVHGVA 160
V++ L K R A+E+YD M RG L I ++L +VH +
Sbjct: 263 VIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLG 322
Query: 161 SAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTL 220
+ Y +++ + + M A+ L +M+ G + YN +M
Sbjct: 323 -----------LVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMAS 371
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
K ++ + EMKE D S+NI + G + + M+ + P
Sbjct: 372 LCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQ-QMGLTP 430
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
+ T+S+ K+GQ+E+A+ + +S I H SL G +E+ V
Sbjct: 431 DAYTYSSFINRLSKLGQMEEAKGAF---DSMIASGITPDNHVYDSLIKGFGLNDEIEEVI 487
Query: 341 NLYRSV 346
NL R +
Sbjct: 488 NLLRQM 493
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 171 DTLKDRRVYGALLNA------YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
DT+ +R +G L Y+++ + A L ++ G S Y+VM+ + K+
Sbjct: 281 DTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM 340
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
+ + + S MK G+ ++ YN ++S + S E+ +F+ MK + P+ +
Sbjct: 341 HMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMK-ESNCEPDTIS 399
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
F+ M +K G + A+E L ++ D Y ++ +G+ EE ++
Sbjct: 400 FNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFD--S 457
Query: 345 SVFPGVT--NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
+ G+T N Y ++I +IE + + + + D I N ++++
Sbjct: 458 MIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTF 511
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 124/272 (45%), Gaps = 5/272 (1%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y ++++ + + A + + KMR G + YN +M K E
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ M ++G++ ++ +Y L ++G+ +M G+ +LM V ++PN FS +
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM-VRNGIHPNHYVFSILVCA 272
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPG 349
Y K +VE+A ++ + + V Y ++ + G+ E+ +Y + + PG
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
N+ Y+++I L E E++ E L + N ++ + KEG ++E
Sbjct: 333 --NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 390
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F+ ++ G KP+ ++ TL +G+ ++ EA
Sbjct: 391 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 422
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 136/299 (45%), Gaps = 37/299 (12%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGA++ ++ +A L ++M D+G + ++ YN ++ +++ E ++ EM
Sbjct: 301 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 360
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++GI L+ +N + S +G + E +F+LM V V P+ T+ST+ Y G++
Sbjct: 361 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM-VRIGVKPDIITYSTLIDGYCLAGKM 419
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE---VYR------------VWNLY 343
++A + L + S D V Y L++ Y + + ++ ++R +N+
Sbjct: 420 DEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNII 479
Query: 344 -------------RSVFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ ++ G+T G Y+ ++ L + + ++F+ +
Sbjct: 480 LQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDL 539
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ R N+M+ +K G D+A+ F + G PN ++ +AE +I + +LE L
Sbjct: 540 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE-NIIGQGLLEEL 597
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 96/210 (45%), Gaps = 10/210 (4%)
Query: 236 EMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKA-VNPNWTTFSTMATMYI 293
E+ +GI DV+SYNI L+ C S E +E + +M D P+ ++ST+ +
Sbjct: 42 ELLRRGIP-DVFSYNILLNGLCDENRSQEALE-LLHIMADDGGDCPPDVVSYSTVINGFF 99
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS-VFPGVT- 351
K G ++K + + + + V Y+ S+ ++ K + V + + + V GV
Sbjct: 100 KEGDLDKTYSTYNEMLDQRISPNVVTYN---SIIAALCKAQTVDKAMEVLTTMVKSGVMP 156
Query: 352 -NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y++++ G + ++ S D N +M + K G +A F
Sbjct: 157 DCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF 216
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+S+ + G KP T++ TL +G+ + ++E
Sbjct: 217 DSMTKRGLKPEITTYGTLLQGYATKGALVE 246
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 116/291 (39%), Gaps = 15/291 (5%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D Y ++N + + ++M D+ + + + YN ++ K + D+
Sbjct: 83 DCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKA 142
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+++ M + G+ D +YN + S G ++ + M+ D V P+ T++++
Sbjct: 143 MEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSD-GVEPDVVTYNSLMD 201
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFP 348
K G+ +A + + R + Y LL Y + G E++ + +L + P
Sbjct: 202 YLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 261
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ + ++ + A+ +E +F + + + ++ K G + A
Sbjct: 262 --NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 319
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIR-------ERRILEALS---CLKGAF 449
+F +I+EG P + + +L G E ILE L CL F
Sbjct: 320 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 370
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 6/257 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+++M + G + Y ++ + K DE ++ M G R + SY I L
Sbjct: 387 LLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLC 446
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
S E + M +++ +PN TF+T+ K G VE+A E L+++ D
Sbjct: 447 SAERWVDAEDLMSQM-IEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDL 505
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
+ Y ++ G GK +E + N+ + + Y ++ S+L++ G I + ++F+
Sbjct: 506 ISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDN 565
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL-----AEGH 432
V D + N ++S K G D+A F ++ G PN +++ L +EG
Sbjct: 566 IQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGF 625
Query: 433 IRERRILEALSCLKGAF 449
++E + + C KGA
Sbjct: 626 VKEAQEMLTELCSKGAL 642
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 168/430 (39%), Gaps = 57/430 (13%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
VV+ L R AL V D M RG + +I + F S
Sbjct: 121 VVRALCARGRIADALSVLDEMRRRG------CAPIPPMYHVILEAACSRGGGGGFRSAVR 174
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV-------HSLP----------- 213
L+D G L+ GN L+++ + D+G +V LP
Sbjct: 175 VLQDLHGRGCALDV-------GNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVS 227
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN ++ K + V+ ++ EM G +V ++N + G E++ V M
Sbjct: 228 YNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQM- 286
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
VD P+ ++T+ K G +E A E L R+ S + V Y+ +L S +
Sbjct: 287 VDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERW 346
Query: 334 EEVYRVW-NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
E+ + ++ + P + ++ ++ ++ + G + + ++ E+ L D
Sbjct: 347 EQAEELLAEMFDNDCP-LDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTT 405
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAE 452
+++ + KEG D+A S+ G +PN+ S+ + +G R ++A L +
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAED-LMSQMIEQ 464
Query: 453 GAKSWRPKPV---NVINFFKACEEESDMGSKEAFVALLRQ----------PGYRKEKDYM 499
G P PV VINF C++ G E + LL+Q Y D +
Sbjct: 465 GCS---PNPVTFNTVINFL--CKK----GLVEQAIELLKQMLLNGCSPDLISYSTVIDGL 515
Query: 500 SLIGLTDEAV 509
G TDEA+
Sbjct: 516 GKAGKTDEAL 525
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/264 (18%), Positives = 117/264 (44%), Gaps = 1/264 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R+Y +L+ + A ++D+M G + + YN ++ + +++ E ++
Sbjct: 294 DIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELL 353
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM + LD ++NI + G ++ + E M ++ P+ T++T+ + K
Sbjct: 354 AEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQM-LEHGCVPDVITYTTVINGFCK 412
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G +++A L+ + + + + Y +L S + + + + +
Sbjct: 413 EGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVT 472
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +I+ L + G +E ++ ++ L S D + ++ K G D+A N ++
Sbjct: 473 FNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 532
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
+G PN+ + ++A +E RI
Sbjct: 533 NKGMSPNTIIYSSIASALSKEGRI 556
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ +A A L++ M +KG + +++ Y+ + + K + V M ++
Sbjct: 508 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQ 567
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ IR D YN +SS +G T++ M V PN +T++ + G V
Sbjct: 568 DVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYM-VSSGCMPNESTYTILIRGLASEGFV 626
Query: 299 EKAEESLRRVESRITGRDRVPYHY 322
++A+E L + S+ R H+
Sbjct: 627 KEAQEMLTELCSKGALRKHFMKHF 650
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 11/268 (4%)
Query: 169 LPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
L D + +RR+ YGAL+N +A AE++++ M+ KG V+ + +N +M Y
Sbjct: 315 LFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYC 374
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
K DE + + M++KG +D ++ NI S E+ + + M+ ++ V PN
Sbjct: 375 KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTME-ERGVAPNV 433
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
+FS + +Y K +A + +E + V Y+ + Y GK EE Y++ N
Sbjct: 434 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 493
Query: 343 Y--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
R + P Y ++I G+++ ++F E + + + +++S K+
Sbjct: 494 MQERGLMPDTYT--YTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKD 551
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETL 428
G D+A ++ + +EG P+ + +L
Sbjct: 552 GRADEAFKLYDEMNKEGIVPDDGIYSSL 579
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 118/263 (44%), Gaps = 1/263 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LLN Y+ + G ++ M + Y +++ Y + + +E E + EM
Sbjct: 226 YNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEML 285
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KGI DVY Y ++ G+ ++ +F+ M ++ + PN T+ + K G++
Sbjct: 286 KKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM-TERRLVPNAYTYGALINGACKAGEM 344
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+ AE + ++S+ +RV ++ L+ Y G +E R+ N+ + + + +
Sbjct: 345 KAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNII 404
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
S R E +++ + + ++++ Y KE NF +A F + ++G
Sbjct: 405 ASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGK 464
Query: 419 KPNSTSWETLAEGHIRERRILEA 441
P+ ++ E + ++ ++ EA
Sbjct: 465 APSVVTYNAFIERYCKKGKMEEA 487
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y +LLNA + + AE G + + YN+++ + + K++D+ + +++
Sbjct: 115 RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNW 174
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M E+G DV+SY ++S G +F+ M ++ V P+ ++ + + K G
Sbjct: 175 MWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMP-ERGVTPDVACYNILIDGFFKKG 233
Query: 297 QVEKAEESLRRVESRITGRDRVP-YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+ A E R+ + +P Y+ +++ GK +E + +W+ + G Y
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 293
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I L G+++G ++++E S D + N M++ Y++ G ++ + ++E
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW-KVME 352
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
+ G S+ L G ++ EA+S
Sbjct: 353 KEGCRTVVSYNILIRGLFENAKVDEAIS 380
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 147/327 (44%), Gaps = 9/327 (2%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRR 177
+++ A E+ +WM +G F ++ +AK ++ A F +P+ D
Sbjct: 163 KQFDKAKELLNWMWEQG--FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVH-SLP-YNVMMTLYMKIKEYDEVESMVS 235
Y L++ + + NA + +++ KG +V+ ++P YNVM+ K ++DE +
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLL-KGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 279
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
MK+ D+Y+Y+ + G+ + V++ M + V+P+ ++TM Y++
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM-AENGVSPDVVVYNTMLNGYLRA 338
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G++E+ E L +V + R V Y+ L+ K +E +W L ++ Y
Sbjct: 339 GRIEECLE-LWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTY 397
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
++ L + G + I EE + + D + M++ +EG D+ + + +
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK 457
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
G KPN + G +R ++ +AL
Sbjct: 458 HGCKPNPHVCNAVINGFVRASKLEDAL 484
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 127/299 (42%), Gaps = 13/299 (4%)
Query: 162 AEDFFLSLPDTL---KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
AE FFL +T+ + + Y L+ R + A+ L++ M ++G++ Y ++
Sbjct: 133 AESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLI 191
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
K + + EM E+G+ DV YNI + +G ++E + +V
Sbjct: 192 NSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSV 251
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
PN +++ M K G+ +++ E R++ G+D Y L+ G + R
Sbjct: 252 YPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATR 311
Query: 339 VWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMM 394
V+ V P V + Y+ M++ R G I E+ E W ++ + N+++
Sbjct: 312 VYKEMAENGVSPDV--VVYNTMLNGYLRAGRI---EECLELWKVMEKEGCRTVVSYNILI 366
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG 453
+ D+A + + + E+ +S ++ L G + + +ALS L+ A G
Sbjct: 367 RGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG 425
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 6/226 (2%)
Query: 81 SLMDNPQLGSA-SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERF 139
L N L A S+L + E G L + ++ L + R V D M G +
Sbjct: 403 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 462
Query: 140 RLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAEL 197
+A I + + + A FF ++ Y L+N +A A
Sbjct: 463 NPHVCNAVI--NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+ +M KG+ + + Y+++M + K+ D ++ + EKG + DV +NI +
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
S G E ++ MK K V PN T +T+ + K+ E+A +
Sbjct: 581 SSGKVEDALQLYSEMKQRKCV-PNLVTHNTLMEGFYKVRDFERASK 625
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 154/385 (40%), Gaps = 54/385 (14%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRG---ERFRLSASDAAIQLDLIAKVHGVASAEDFFLS 168
+++EL + + A VY M + G + LS +D ++K + +A F S
Sbjct: 97 LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLST-----MIDGLSKAGRIGAAVRIFKS 151
Query: 169 LP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ + VY AL++ +AR A ++ +M+ ++ YNV++ K +
Sbjct: 152 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGD 211
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE----------------------- 263
+ + EM E G + DVY+YNI +S G+T+
Sbjct: 212 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYT 271
Query: 264 ----------KMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
K+E LM+ P T++ + KMG++E+A + LR++
Sbjct: 272 AIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 331
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF---PGVTNLGYHAMISSLARIGDI 368
D V Y SL +GK++ + + L++ + + + Y A+I L + G I
Sbjct: 332 GCTPDVVTYT---SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKI 388
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+++ S D + M+ K G A F S+ G PN + L
Sbjct: 389 PQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 448
Query: 429 AEGHIRERRI---LEALSCLKGAFA 450
G + R++ LE L+ +K AF
Sbjct: 449 IHGLCKARKMDCALEMLAQMKKAFC 473
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 104/263 (39%), Gaps = 1/263 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ALLN + A L+ K+ D G + Y ++ K K E + EM
Sbjct: 305 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 364
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+G+ LD Y + G + V++ M V P+ T STM K G++
Sbjct: 365 LRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV-PDVVTLSTMIDGLSKAGRI 423
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
A + +E+R + V Y L+ K + + + F + Y+ +
Sbjct: 424 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 483
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I L + GD+E F+E L D N+++S + K GN D A F+ +
Sbjct: 484 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 543
Query: 419 KPNSTSWETLAEGHIRERRILEA 441
N ++ L G + R++ +A
Sbjct: 544 SANVVTYGALISGLCKRRQLTKA 566
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 1/228 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ALLN + A L+ K+ D G + Y ++ K K E + EM
Sbjct: 24 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 83
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+G+ LD Y + G + V++ M V P+ T STM K G++
Sbjct: 84 LRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV-PDVVTLSTMIDGLSKAGRI 142
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
A + +E+R + V Y L+ K + + + F + Y+ +
Sbjct: 143 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVL 202
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
I L + GD+E F+E L D N+++S + K GN D A
Sbjct: 203 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 250
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRG---ERFRLSASDAAIQLDLIAKVHGVASAEDFFLS 168
+++EL + + A VY M + G + LS +D ++K + +A F S
Sbjct: 378 LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLST-----MIDGLSKAGRIGAAVRIFKS 432
Query: 169 LP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ + VY AL++ +AR A ++ +M+ ++ YN+++ K +
Sbjct: 433 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 492
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+ + EM E G + DVY+YNI +S G+T+ GVF+ M + + N T+
Sbjct: 493 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC-SANVVTYG 551
Query: 287 TMATMYIKMGQVEKAEESLRRVESR 311
+ + K Q+ KA + ++ R
Sbjct: 552 ALISGLCKRRQLTKASLYFQHMKER 576
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 143/334 (42%), Gaps = 10/334 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V+ L KF R A ++ + M RG F ++ + K+ V +A+D F +P
Sbjct: 287 VILGLCKFDRINEAAKMVNRMLIRG--FTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 344
Query: 172 TLKDRRVYGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
++ L++ +V R+ +L D + G YN ++ Y K
Sbjct: 345 --PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLA 402
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++ +M+ KG + +VYSY I + G ++ + M D + PN F+ + +
Sbjct: 403 LEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSAD-GLKPNTVGFNCLIS 461
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
+ K ++ +A E R + + D ++ L+S G E + +W L + GV
Sbjct: 462 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIKHALWLLRDMISEGV 519
Query: 351 T--NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ Y+ +I++ R G+I+ K+ E + S D N ++ + G DKA +
Sbjct: 520 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARS 579
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F ++ +G P+S S L G R + EA+
Sbjct: 580 LFEKMLRDGLVPSSISCNILINGLCRSGMVEEAV 613
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 130/348 (37%), Gaps = 40/348 (11%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
VL D G + +V K + A + + M+ G + + I
Sbjct: 405 VLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISA-- 462
Query: 153 IAKVHGVASAEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
K H + A + F +P D + +L++ +A L+ M +G +
Sbjct: 463 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 522
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
++ YN ++ +++ E E +V+EM +G LD +YN + G +K +FE
Sbjct: 523 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFE 582
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M D V P+ + + + + G VE+A E
Sbjct: 583 KMLRDGLV-PSSISCNILINGLCRSGMVEEAVEF-------------------------- 615
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
+KE V R P + ++++I+ L R G IE +F + + D
Sbjct: 616 -QKEMVLR------GSTPDIVT--FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTY 666
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
N +MSW K G A + IE+G PN +W L + + + +
Sbjct: 667 NTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETL 714
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 105/246 (42%), Gaps = 13/246 (5%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+ V+M + E D S++ +M + G + Y + S + + E M
Sbjct: 214 FGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 273
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ V P+ TF+ + K ++ +A + + R+ R D + Y YL++ +G+
Sbjct: 274 LMGCV-PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRV 332
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY----DPRI 389
+ ++ YR P T++ ++ +I G ++ + + + + +SY D
Sbjct: 333 DAAKDLF--YR--IPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMV---TSYGIVPDVCT 385
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAF 449
N ++ Y K+G A + +G KPN S+ L +G + +I EA + L
Sbjct: 386 YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLN-EM 444
Query: 450 AAEGAK 455
+A+G K
Sbjct: 445 SADGLK 450
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 11/268 (4%)
Query: 169 LPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
L D + +RR+ YGAL+N +A AE++++ M+ KG V+ + +N +M Y
Sbjct: 319 LFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYC 378
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
K DE + + M++KG +D ++ NI S E+ + + M+ ++ V PN
Sbjct: 379 KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTME-ERGVAPNV 437
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
+FS + +Y K +A + +E + V Y+ + Y GK EE Y++ N
Sbjct: 438 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 497
Query: 343 Y--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
R + P Y ++I G+++ ++F E + + + +++S K+
Sbjct: 498 MQERGLMPDTYT--YTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKD 555
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETL 428
G D+A ++ + +EG P+ + +L
Sbjct: 556 GRADEAFKLYDEMNKEGIVPDDGIYSSL 583
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 118/263 (44%), Gaps = 1/263 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LLN Y+ + G ++ M + Y +++ Y + + +E E + EM
Sbjct: 230 YNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEML 289
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KGI DVY Y ++ G+ ++ +F+ M ++ + PN T+ + K G++
Sbjct: 290 KKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM-TERRLVPNAYTYGALINGACKAGEM 348
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+ AE + ++S+ +RV ++ L+ Y G +E R+ N+ + + + +
Sbjct: 349 KAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNII 408
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
S R E +++ + + ++++ Y KE NF +A F + ++G
Sbjct: 409 ASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGK 468
Query: 419 KPNSTSWETLAEGHIRERRILEA 441
P+ ++ E + ++ ++ EA
Sbjct: 469 APSVVTYNAFIERYCKKGKMEEA 491
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 157/345 (45%), Gaps = 26/345 (7%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V++EL K R AL + + M RG + + ++ ++ + K + A++F +
Sbjct: 380 VIQELCKAGRVDSALSLLETMIKRG--YCPDMATHSMLINELCKADKIQEAQEFLQGM-- 435
Query: 172 TLKDRRV---------YGALLNAYVRARMRGNAELLIDKM-RDKGYAVHSLPYNVMMTLY 221
DR++ Y +LLN+ +A+ A + M ++ + + Y++++ +
Sbjct: 436 ---DRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGF 492
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
KI E E + +M + +V +YN +L+ +G +GV+E M V +P+
Sbjct: 493 CKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM-VAAGCSPD 551
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
T+ST+ + + ++A E + SR + V Y+ LL K +E + ++
Sbjct: 552 VITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 611
Query: 342 --LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWY 397
+ R P + Y ++ +G IE ++F+E +S +DP + N ++ +
Sbjct: 612 KMVERGCDP--DRVTYTTLLYGFCNVGKIEQAVEVFDEMVS--KGHDPDVVAYNCLLKGF 667
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ G +A+ F ++ KP++ S + +G + +R+ +A+
Sbjct: 668 FRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAV 712
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y L++ + AR A L + M +G +++ YN ++ K + DE
Sbjct: 550 PDVI----TYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDE 605
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ +M E+G D +Y L + G E+ VF+ M V K +P+ ++ +
Sbjct: 606 AHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEM-VSKGHDPDVVAYNCLL 664
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+ + G+ +A++ + + SR D V ++ ++ + ++ V+
Sbjct: 665 KGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC 724
Query: 350 VTNL-GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
+L Y+++I L + K+F+E +K S DP N+++
Sbjct: 725 SPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 770
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 116/280 (41%), Gaps = 17/280 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y LL+ +R R A + +KM +G + Y V++ + DE
Sbjct: 128 DVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFF 187
Query: 235 SEMKEKGIRLDVYSYNI---WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
EM +KG + Y L + G +G ++ G ++K V +
Sbjct: 188 GEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFG----RDLEKRVAVEMMLKKALLVN 243
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW--NLYRSVFPG 349
++ + +A + R + D Y Y++ + + +E ++++ S P
Sbjct: 244 FVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAP- 302
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK---SSYDPRIANLMMSWYVKEGNFDKA 406
+ N+ + A +S L + G I E+ FE +++ SS P + ++++ ++ G DKA
Sbjct: 303 LNNVAWTAFLSGLCKSGKI---EQAFEACRTMQESLSSSQP-VYDMLIRLLIESGRIDKA 358
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
E I +P+S + ++ + + R+ ALS L+
Sbjct: 359 EEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLE 398
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 4/171 (2%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRR 177
R++ A E+++ M +RG R +A L + K A + F + + DR
Sbjct: 566 RKHDQAHELFETMISRG--CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRV 623
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL + A + D+M KG+ + YN ++ + + + E + + M
Sbjct: 624 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVM 683
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ + D S+NI + + VFE M+ D +P+ T++++
Sbjct: 684 VSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSL 734
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 55/302 (18%), Positives = 116/302 (38%), Gaps = 45/302 (14%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK-E 239
ALL +V A L M G + Y+ M+ + K++ DE + EM E
Sbjct: 239 ALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVE 298
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-VDKAVNPNWTTFSTMATMYIKMGQV 298
L+ ++ +LS G K+E FE + + ++++ + + + + I+ G++
Sbjct: 299 SKAPLNNVAWTAFLSGLCKSG---KIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRI 355
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN---- 352
+KAEE+ + R H ++ G+ + + + R P +
Sbjct: 356 DKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSML 415
Query: 353 -------------------------------LGYHAMISSLARIGDIEGMEKIFEEWLSV 381
Y+++++SL + + IF +S
Sbjct: 416 INELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVS- 474
Query: 382 KSSYDPRIAN--LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+ S+ P + + +++ + K +AE + +I+ PN T++ G +R+ RI
Sbjct: 475 ERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIA 534
Query: 440 EA 441
+A
Sbjct: 535 DA 536
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 7/260 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+N R AE L+D+M + G+ + + Y ++ K+ + D +++
Sbjct: 9 DVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLL 68
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M E I+ DV Y + G K + +F M DK + PN T++ M
Sbjct: 69 RKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMH-DKGIFPNVLTYNCMIDGCCS 127
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVT 351
G+ AE+ LR + D V ++ L++ + G + + EE+YR L R++FP
Sbjct: 128 YGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREM-LGRNIFP--D 184
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y+++I + ++ + IF+ +S S + N ++ + D +
Sbjct: 185 TITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLH 244
Query: 412 SIIEEGGKPNSTSWETLAEG 431
++ G P+S S+ TL G
Sbjct: 245 EMLRRGLVPDSVSYNTLIHG 264
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG ++N + +A L+ KM + + Y ++ K + + +++ +EM
Sbjct: 48 YGTIVNGMCKMGDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMH 107
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KGI +V +YN + C S G E + M ++ V+P+ TF+ + ++K G++
Sbjct: 108 DKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDM-IESNVDPDVVTFNALINAFVKEGKI 166
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+AEE R + R D + Y+ L+ + + ++ +++L S + + +
Sbjct: 167 SEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTL 226
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
I R ++ K+ E L D N ++ + + G+ + A+ F +I +
Sbjct: 227 IGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +Y A+++ + A+ L +M DKG + L YN M+ ++ + E ++
Sbjct: 79 DVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLL 138
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M E + DV ++N +++ +G + E ++ M + + + P+ T++++ + K
Sbjct: 139 RDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREM-LGRNIFPDTITYNSLIDGFCK 197
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+++ A+ + S+ + + + L+ + ++ ++ + L R + P +
Sbjct: 198 HSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVP--DS 255
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLS 380
+ Y+ +I + GD+ + +F+E +S
Sbjct: 256 VSYNTLIHGFCQAGDLNAAQDLFQEMIS 283
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 169/402 (42%), Gaps = 29/402 (7%)
Query: 68 RPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKW-ELCRVVKELR--------- 117
R M K A R++ ++ L + N+ G S +W E RV KE+R
Sbjct: 268 RAMDKAEAFLRQM--VNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV 325
Query: 118 ----------KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF- 166
K+ + K A +V+D M +G+ + + + I L+ A + D F
Sbjct: 326 TFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN--IMLNGYATKGCLVDMTDLFD 383
Query: 167 LSLPDTLKDR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
L L D + + L+ AY M A ++ ++MRD G + L Y ++ +I
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIG 443
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM-EGVFELMKVDKAVNPNWTT 284
+ D+ ++M ++G+ D Y+Y+ + + GS K E + E+M + ++ +
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIM--NNGMHLDIVL 501
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
FS++ K+G+V A+ + V Y L+ Y VGK E+ RV++
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV 561
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S ++ Y +++ +IG I+ +F E L + N+++ + G
Sbjct: 562 SAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 621
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
A+ F+ + E G N ++ + G + R EA+ K
Sbjct: 622 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 663
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 140/340 (41%), Gaps = 56/340 (16%)
Query: 153 IAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ K + AE F + + L + Y L+ Y A + +MR +
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 323
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
+ +N++M K + E + M KG DV+SYNI L+ ++G M +F+
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383
Query: 271 LM-----------------------KVDKA-----------VNPNWTTFSTMATMYIKMG 296
LM +DKA V PN T++T+ ++G
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIG 443
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLL---SLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+++ A E ++ + D+ YH L+ +GS+ K +E + + N
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKE----------LISEIMNN 493
Query: 354 GYH-------AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
G H ++I++L ++G + + IF+ ++V + +++M Y G +KA
Sbjct: 494 GMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
F++++ G +PN + TL G+ + RI E LS +
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 120/269 (44%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++++A +AR AE + +M +KG ++ YN ++ Y ++ E +
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+ + I DV ++N+ + S G ++ VF+ M + K NP+ +++ M Y
Sbjct: 313 KEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYAT 371
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTN 352
G + + + ++ L+ Y + G ++ ++N R V P V
Sbjct: 372 KGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNV-- 429
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
L Y +I++L RIG ++ + F + + + D + ++ + G+ KA+ +
Sbjct: 430 LTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISE 489
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
I+ G + + ++ + R+++A
Sbjct: 490 IMNNGMHLDIVLFSSIINNLCKLGRVMDA 518
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 131/293 (44%), Gaps = 10/293 (3%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDT-LK-DRRVYGALLNAYVRARMRGNA-ELLIDKMR 203
AI +D + H A FF L T L+ D + LL + A+ A ++L+ +
Sbjct: 115 AILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTP 174
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL--DVYSYNIWLSSCGSQGS 261
+ G Y++++ + + + ++ M E G DV +YN + +G
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGD 234
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
K +F+ M V + + P++ T+S++ K ++KAE LR++ ++ + Y+
Sbjct: 235 VNKACDLFKEM-VQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYN 293
Query: 322 YLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
L+ Y S G+ +E RV+ R S+ P V ++ ++ SL + G I+ +F+
Sbjct: 294 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVT--FNMLMGSLCKYGKIKEARDVFDTMA 351
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ D N+M++ Y +G F+ ++ +G P ++ L + +
Sbjct: 352 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 404
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++ A A++ +M + G A++ Y++++ K + +DE + E+
Sbjct: 606 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 665
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +++D+ + N ++ E+ + +F + V P T+S M T IK G
Sbjct: 666 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV-PCVVTYSIMITNLIKEGL 724
Query: 298 VEKAEESLRRVESRITGRD-RVPYHYLLSLYGSVGKKEEVYR 338
VE+AE+ +++ D R+ H + L KK E+ R
Sbjct: 725 VEEAEDMFSSMQNAGCEPDSRLLNHVVRELL----KKNEIVR 762
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 126/273 (46%), Gaps = 5/273 (1%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ + D ALL A ++RM A + D+M G A+++ YN M+ + +K +
Sbjct: 140 EVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALA 199
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
ES+++ M G+ LD +S+N ++ +G + V E M+ ++ V + T++++
Sbjct: 200 ESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERME-NQGVKADVVTWNSLIH 258
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFP 348
K +V++A + LR + D V Y L+ Y G EE ++ + + P
Sbjct: 259 GLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLP 318
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
GV Y+A++ L G ++ + + E K D N +++ Y K G+ A
Sbjct: 319 GVAT--YNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALK 376
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++E G + + +++ L G + + + EA
Sbjct: 377 VKRRMMESGLQLDQFTYKALVHGFCKAKELDEA 409
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 118/264 (44%), Gaps = 1/264 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y ALL+ Y ++ A ++++M G++ + YN +++ Y + DE +
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M EKG + DV++Y LS G E +FE M+ + PN TF+ MY
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR-NAGCKPNICTFNAFIKMYGN 431
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+ + + + D V ++ LL+++G G EV V+ +
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +IS+ +R G E ++ L + D N +++ + G ++++E +
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
+ KPN ++ +L + + I
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEI 575
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 141/328 (42%), Gaps = 40/328 (12%)
Query: 105 TKWELCRVVKELRKFRRYKHALEVYDW-MNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
T EL +K L +++ AL +DW M + + L S AI + ++ K V+SA
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA 193
Query: 164 DFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
+ F + +++ G+++ Y +++ +
Sbjct: 194 NMF---------------------------------NGLQEDGFSLDVYSYTSLISAFAN 220
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST-EKMEGVFELMKVDKAVNPNW 282
Y E ++ +M+E G + + +YN+ L+ G G+ K+ + E MK D + P+
Sbjct: 221 SGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD-GIAPDA 279
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN- 341
T++T+ T + ++A + +++ D+V Y+ LL +YG + +E +V N
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 342 -LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
+ P + Y+++IS+ AR G ++ ++ + + D ++S + +
Sbjct: 340 MVLNGFSPSIVT--YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA 397
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETL 428
G + A + F + G KPN ++
Sbjct: 398 GKVESAMSIFEEMRNAGCKPNICTFNAF 425
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 135/340 (39%), Gaps = 71/340 (20%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
T D Y LL+ + RA +A + ++MR+ G + +N + +Y ++ E+
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK------------------ 273
+ E+ G+ D+ ++N L+ G G ++ GVF+ MK
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 274 ----------------VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+D V P+ +T++T+ + G E++E+ L +E +
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 318 VPYHYLLSLYGSVGKK--------EEVYRVWNLYRSV---------------------FP 348
+ Y LL Y + GK+ EEVY R+V F
Sbjct: 560 LTYCSLLHAYAN-GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV-----KSSYDPRIA--NLMMSWYVKEG 401
+ G+ I++L + I G ++ + V + + P +A N +M + +
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+F K+E I+ +G KP+ S+ T+ + R R+ +A
Sbjct: 679 DFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 112/268 (41%), Gaps = 44/268 (16%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM-TLYMKIKEYD---EVESM 233
Y +LL+AY + G L+ + ++ Y+ P V++ TL + + D E E
Sbjct: 561 TYCSLLHAYANGKEIG----LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
SE+KE+G D+ + N +S G + K GV + MK ++ P+ T++++ M+
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK-ERGFTPSMATYNSLMYMHS 675
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+ K+EE LR + L + + P + +
Sbjct: 676 RSADFGKSEEILREI---------------------------------LAKGIKPDI--I 700
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ +I + R + +IF E + D N + Y + F++A +
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
I+ G +PN ++ ++ +G+ + R EA
Sbjct: 761 IKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ++++ Y R +M A ++D M+++G+ YN +M ++ + ++ + E ++
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KGI+ D+ SYN + + +F M+ + + P+ T++T Y
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR-NSGIVPDVITYNTFIGSYAA 746
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
E+A +R + ++ Y+ ++ Y + +K+E + + NL
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA-------KLFVEDLRNLD 799
Query: 355 YHAMISSLARIGDIEGMEKIFEEW 378
HA + D+ +E+I ++W
Sbjct: 800 PHA-----PKGEDLRLLERIVKKW 818
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y +LLNA + + AE G + + YN+++ + + K++D+ + +++
Sbjct: 115 RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNW 174
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M E+G DV+SY ++S G +F+ M ++ V P+ ++ + + K G
Sbjct: 175 MWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMP-ERGVTPDVACYNILIDGFFKKG 233
Query: 297 QVEKAEESLRRVESRITGRDRVP-YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+ A E R+ + +P Y+ +++ GK +E + +W+ + G Y
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 293
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I L G+++G ++++E S D + N M++ Y++ G ++ + ++E
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW-KVME 352
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
+ G S+ L G ++ EA+S
Sbjct: 353 KEGCRTVVSYNILIRGLFENAKVDEAIS 380
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 147/327 (44%), Gaps = 9/327 (2%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRR 177
+++ A E+ +WM +G F ++ +AK ++ A F +P+ D
Sbjct: 163 KQFDKAKELLNWMWEQG--FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVH-SLP-YNVMMTLYMKIKEYDEVESMVS 235
Y L++ + + NA + +++ KG +V+ ++P YNVM+ K ++DE +
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLL-KGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 279
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
MK+ D+Y+Y+ + G+ + V++ M + V+P+ ++TM Y++
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM-AENGVSPDVVVYNTMLNGYLRA 338
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G++E+ E L +V + R V Y+ L+ K +E +W L ++ Y
Sbjct: 339 GRIEECLE-LWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTY 397
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
++ L + G + I EE + + D + M++ +EG D+ + + +
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK 457
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
G KPN + G +R ++ +AL
Sbjct: 458 HGCKPNPHVCNAVINGFVRASKLEDAL 484
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 127/299 (42%), Gaps = 13/299 (4%)
Query: 162 AEDFFLSLPDTL---KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
AE FFL +T+ + + Y L+ R + A+ L++ M ++G++ Y ++
Sbjct: 133 AESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLI 191
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
K + + EM E+G+ DV YNI + +G ++E + +V
Sbjct: 192 NSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSV 251
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
PN +++ M K G+ +++ E R++ G+D Y L+ G + R
Sbjct: 252 YPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATR 311
Query: 339 VWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMM 394
V+ V P V + Y+ M++ R G I E+ E W ++ + N+++
Sbjct: 312 VYKEMAENGVSPDV--VVYNTMLNGYLRAGRI---EECLELWKVMEKEGCRTVVSYNILI 366
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG 453
+ D+A + + + E+ +S ++ L G + + +ALS L+ A G
Sbjct: 367 RGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG 425
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 6/226 (2%)
Query: 81 SLMDNPQLGSA-SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERF 139
L N L A S+L + E G L + ++ L + R V D M G +
Sbjct: 403 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 462
Query: 140 RLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAEL 197
+A I + + + A FF ++ Y L+N +A A
Sbjct: 463 NPHVCNAVI--NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+ +M KG+ + + Y+++M + K+ D ++ + EKG + DV +NI +
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
S G E ++ MK K V PN T +T+ + K+ E+A +
Sbjct: 581 SSGKVEDALQLYSEMKQRKCV-PNLVTHNTLMEGFYKVRDFERASK 625
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 90/253 (35%), Gaps = 36/253 (14%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
V A++N +VRA +A M KG + YN ++ K + + E ++V E
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M KG + ++ +Y++ ++ QG M ++K P+ + + G
Sbjct: 525 MLHKGWKPNMITYSLLMNGL-CQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSG 583
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+VE A L LY + + R P + ++
Sbjct: 584 KVEDA----------------------LQLYSEMKQ-----------RKCVPNLVT--HN 608
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ ++ D E KI++ L D N+ + A F N ++
Sbjct: 609 TLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDR 668
Query: 417 GGKPNSTSWETLA 429
G P + +W L
Sbjct: 669 GVLPTAITWNILV 681
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 145/319 (45%), Gaps = 43/319 (13%)
Query: 154 AKVHGVASAEDF---FLSLPDTLKDRRV-----YGALLNAYVRARMRGNAELLIDKMRDK 205
A + G + A+DF F L + +K+ + Y +++ +A +A L+D+MRDK
Sbjct: 82 ALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDK 141
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G + + YNV++ + ++ DE + M+ EM +G DV +YN ++
Sbjct: 142 GCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFI------------ 189
Query: 266 EGVFELMKVDKA--------VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+G+ + +VD+A V P+ +++T+ K G ++ A L + +R D
Sbjct: 190 KGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDV 249
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-----PGVTNLGYHAMISSLARIGDIEGME 372
V Y SL K EV R L S+ P + + Y++++ +L R+G I E
Sbjct: 250 VTYS---SLIDGFCKGGEVERAMGLLDSMLKLGCRPNM--VAYNSLLGALHRLGHIGKAE 304
Query: 373 KIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+ E + + P + N + K KA+A F+ ++E G PN++S+ L
Sbjct: 305 DMLVEM--ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIV 362
Query: 431 GHIRERRILEALSCLKGAF 449
+ +L+ L C G F
Sbjct: 363 DILLYTVLLDGL-CKGGRF 380
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 133/304 (43%), Gaps = 25/304 (8%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + LL R+ A L+ +M++ G YN +++ Y K K++ + +
Sbjct: 41 DAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL 100
Query: 235 SEMKEKGIRLDVYSY-NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+EM + V +Y NI C ++ + + ++ + E+ DK +PN T++ +
Sbjct: 101 AEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMR--DKGCSPNIYTYNVIVEGLC 158
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+ ++++A++ L + R D V Y+ + + +E R + V P V +
Sbjct: 159 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA-RKFLARMPVTPDVVS- 216
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +I+ L + GD++ ++ + + + D + ++ + K G ++A +S+
Sbjct: 217 -YTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 275
Query: 414 IEEGGKPNSTSWETLAE-----GHI---------RERR-----ILEALSCLKGAFAAEGA 454
++ G +PN ++ +L GHI ERR ++ +C+ G AE
Sbjct: 276 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERV 335
Query: 455 KSWR 458
K +
Sbjct: 336 KKAK 339
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 5/203 (2%)
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G +V++YN L + +K VF+ M +DK+ P+ TF+ + + Q+EK
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEM-IDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAM 358
A + L R++ D Y+ L+S Y + ++ + P V Y +
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVT--YTNI 118
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ L + K+ +E S + N+++ +E D+A+ + G
Sbjct: 119 VDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY 178
Query: 419 KPNSTSWETLAEGHIRERRILEA 441
P+ ++ + +G + R+ EA
Sbjct: 179 FPDVVTYNSFIKGLCKCDRVDEA 201
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 5/281 (1%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
L + L YGAL+N + +A + L+ +M +G ++ +N ++ K
Sbjct: 266 LKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGL 325
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
E M+ M E G D+ +YNI ++ G E+ + + E K ++ + PN +++
Sbjct: 326 VTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAK-ERGLLPNKFSYT 384
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYR 344
+ Y K G KA L R+ D V Y + G+ + V + +
Sbjct: 385 PLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEK 444
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
VFP Y+ ++S L + G I M+ + E L D + ++ +++ G D
Sbjct: 445 GVFPDAQI--YNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELD 502
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+A F II +G P + + +G + ++ +ALSCL
Sbjct: 503 EAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCL 543
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 150/354 (42%), Gaps = 14/354 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N + A+ L++K +++G + Y +M Y K +Y + M+
Sbjct: 344 DITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGML 403
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ E G + D+ SY ++ G + V E M ++K V P+ ++ + + K
Sbjct: 404 FRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKM-MEKGVFPDAQIYNILMSGLCK 462
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
G++ + L + R D + L+ + G+ +E +++ + + V PG+
Sbjct: 463 KGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGI-- 520
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+GY+AMI + G + E SV + D + ++ YVK+ + A F
Sbjct: 521 VGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQ 580
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACE 472
+++ KPN ++ +L G ++ ++ A G + + + V FFKA +
Sbjct: 581 MMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGK 640
Query: 473 EESDMGSKEAFVALLRQPGYRKEKDYMSLI-GLTDEA-----VAENNKKNDEDS 520
E + F +L + + LI GLT+ A + E + K +E S
Sbjct: 641 PER---ATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERS 691
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 36/272 (13%)
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
H + YN+++ Y K + ++E+K KG+ V +Y ++ G E ++ +
Sbjct: 239 HVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLL 298
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
M + +N N F+ + K G V +A E LRR+ G D Y+ +++
Sbjct: 299 TEMAA-RGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCK 357
Query: 330 VGKKEEVYRVWNLY--RSVFPG--------------------------VTNLG------- 354
G+ EE + R + P + +G
Sbjct: 358 GGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVS 417
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y A I + G+I+ + E+ + D +I N++MS K+G + + ++
Sbjct: 418 YGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEML 477
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ +P+ + TL +G IR + EA+ K
Sbjct: 478 DRNVQPDVYVFATLIDGFIRNGELDEAIKIFK 509
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 1/264 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y ALL+ Y ++ A ++++M G++ + YN +++ Y + DE +
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M EKG + DV++Y LS G E +FE M+ + PN TF+ MY
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMR-NAGCKPNICTFNAFIKMYGN 431
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+ + + D V ++ LL+++G G EV V+ +
Sbjct: 432 RGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +IS+ +R G E ++ L + D N +++ + G ++++E +
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
+ KPN ++ +L + + I
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEI 575
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 141/348 (40%), Gaps = 79/348 (22%)
Query: 105 TKWELCRVVKELRKFRRYKHALEVYDW-MNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
T EL +K L +++ AL +DW M + + L S AI + ++ K V+SA
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAA 193
Query: 164 DFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY 221
+ F L + D Y +L++A+ + A + KM ++G + YNV++ ++
Sbjct: 194 NLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVF 253
Query: 222 MKI-KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
K+ ++++ S+V +MK GI D Y+YN ++ C ++ VFE MK
Sbjct: 254 GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA------ 307
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
FS D+V Y+ LL +YG + +E +V
Sbjct: 308 --AGFS----------------------------HDKVTYNALLDVYGKSHRPKEAMKVL 337
Query: 341 NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYV 398
N ME + + P I N ++S Y
Sbjct: 338 N----------------------------EMEL---------NGFSPSIVTYNSLISAYA 360
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++G D+A N + E+G KP+ ++ TL G R ++ A++ +
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFE 408
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 135/340 (39%), Gaps = 71/340 (20%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
T D Y LL+ + RA +A + ++MR+ G + +N + +Y ++ ++
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMM 439
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK------------------ 273
+ E+ G+ D+ ++N L+ G G ++ GVF+ MK
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 274 ----------------VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+D V P+ +T++T+ + G E++E+ L +E +
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 318 VPYHYLLSLYGSVGKK--------EEVYRVWNLYRSV---------------------FP 348
+ Y LL Y + GK+ EEVY R+V F
Sbjct: 560 LTYCSLLHAYAN-GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV-----KSSYDPRIA--NLMMSWYVKEG 401
+ G+ I++L + I G ++ + V + + P +A N +M + +
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+F K+E I+ +G KP+ S+ T+ + R R+ +A
Sbjct: 679 DFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 48/270 (17%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM-TLYMKIKEYD---EVESM 233
Y +LL+AY + G L+ + ++ Y+ P V++ TL + + D E E
Sbjct: 561 TYCSLLHAYANGKEIG----LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
SE+KE+G D+ + N +S G + K V + MK ++ P+ T++++ M+
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMK-ERGFTPSMATYNSLMYMHS 675
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVT 351
+ K+EE LR + ++ D + Y+ ++ Y + + R+++ R + P V
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDV- 734
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y+ I S A + +FEE + V
Sbjct: 735 -ITYNTFIGSYA-------ADSMFEEAIGV----------------------------VR 758
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+I+ G +PN ++ ++ +G+ + R EA
Sbjct: 759 YMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ++++ Y R +M G A ++D M+++G+ YN +M ++ + ++ + E ++
Sbjct: 628 DITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KGI+ D+ SYN + + +F M+ D + P+ T++T Y
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR-DSGIVPDVITYNTFIGSYAA 746
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
E+A +R + ++ Y+ ++ Y + +K+E + + NL
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA-------KLFVEDLRNLD 799
Query: 355 YHAMISSLARIGDIEGMEKIFEEW 378
HA + D+ +E+I ++W
Sbjct: 800 PHA-----PKGEDLRLLERIVKKW 818
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 144/328 (43%), Gaps = 6/328 (1%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK---DRRVY 179
K A V + M +G + + + I D + K+ A FL L + + Y
Sbjct: 268 KQAFHVLEEMVGKGLKPNVYTHTSLI--DGLCKIGWTERAFRLFLKLVKSSSYKPNVHTY 325
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
++ Y + AE+L+ +M ++G A ++ Y ++ + + +D ++++MK
Sbjct: 326 TVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKL 385
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+G ++Y+YN + +G ++ V M + + P+ T++ + T + K G +
Sbjct: 386 EGFLPNIYTYNAIIGGFCKKGKIQQAYKVLR-MATSQGLCPDKVTYTMLITEHCKQGHIT 444
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
A + ++ D Y ++++Y + E+ ++++ S+ T Y +MI
Sbjct: 445 YALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMI 504
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ R+G K+FE + DP ++S KE ++A A F +++++
Sbjct: 505 AGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMV 564
Query: 420 PNSTSWETLAEGHIRERRILEALSCLKG 447
P + TLA + R + A+S L G
Sbjct: 565 PCDVTCVTLAYEYCRRDKTTIAVSFLDG 592
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 105/274 (38%), Gaps = 35/274 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R + AL+ + A+ L+ M +G+++ S V++ + + + +V +
Sbjct: 180 DARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLF 239
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M E G +V +Y W+ +G ++ V E M V K + PN T +++ K
Sbjct: 240 GRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEM-VGKGLKPNVYTHTSLIDGLCK 298
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+G E+A + L L S K V+
Sbjct: 299 IGWTERA------------------FRLFLKLVKSSSYKPNVHT---------------- 324
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y MI + G + E + + + + ++ + + G+FD+A N +
Sbjct: 325 YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMK 384
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGA 448
EG PN ++ + G ++ +I +A L+ A
Sbjct: 385 LEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMA 418
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 140/329 (42%), Gaps = 15/329 (4%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAED----FFL 167
V+ L K ++Y A+E++ M + R D +I ED F
Sbjct: 81 VIHCLIKVKQYGQAIEIFSSMREKRSECR---PDVVTFTSIIHLYSVRGQIEDCKAVFST 137
Query: 168 SLPDTLKDRRV-YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
L + +K V Y AL++AY M A + D+M+ G+ + Y +++ + + ++
Sbjct: 138 MLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQ 197
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+ MK + ++ SYN + + GS G + + M+ D ++PN +
Sbjct: 198 PARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQD-GIHPNVVSIC 256
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
T+ + GQ + L E R + + + + Y ++G+ E + NLYRS+
Sbjct: 257 TLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYE---KAINLYRSM 313
Query: 347 FPGVT---NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
T ++ + +IS R+ E F+E L ++ I + M+ Y K+G
Sbjct: 314 ENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQL 373
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
KAE+ FNS+ G P+ ++ + +
Sbjct: 374 VKAESLFNSLKGSGCCPDLVTYTAMINAY 402
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 136/340 (40%), Gaps = 44/340 (12%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-- 169
V+ + +Y AL ++ M +G R + I + + KV A + F S+
Sbjct: 46 VLSAYKSGAQYSKALSYFELM--KGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMRE 103
Query: 170 --PDTLKDRRVYGALLNAY-VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ D + ++++ Y VR ++ + + + M +G + + YN +++ Y
Sbjct: 104 KRSECRPDVVTFTSIIHLYSVRGQIE-DCKAVFSTMLAEGIKPNIVSYNALISAYASHGM 162
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
E S+ EMK G DV SY +S+ G + VF++MK +K PN +++
Sbjct: 163 DKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKC-KPNLVSYN 221
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
+ Y G + +A + LR +E + V LL+ G G+K + SV
Sbjct: 222 ALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNI-------DSV 274
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
G H ++++A N + Y+ G ++KA
Sbjct: 275 LSAAELRGIH--LNTIA--------------------------CNSAIGSYMNIGEYEKA 306
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ S+ + KP+S ++ L G R + EAL K
Sbjct: 307 INLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFK 346
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 5/256 (1%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
R + L+NA A + KM D G + +N++++ Y +Y + S
Sbjct: 5 RSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFE 64
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFSTMATMYIK 294
MK IR D + NI + + +F M+ ++ P+ TF+++ +Y
Sbjct: 65 LMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSV 124
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVF-PGVTN 352
GQ+E + + + + V Y+ L+S Y S G +E + V++ + RS F P V
Sbjct: 125 RGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDV-- 182
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y ++IS+ R ++F+ K + N +M Y G +A
Sbjct: 183 VSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILRE 242
Query: 413 IIEEGGKPNSTSWETL 428
+ ++G PN S TL
Sbjct: 243 MEQDGIHPNVVSICTL 258
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LL A R + N + ++ +G ++++ N + YM I EY++ ++ M+ K
Sbjct: 258 LLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKT 317
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ D ++ I +S C E+ F+ M +D + + +S+M Y K GQ+ KA
Sbjct: 318 TKPDSVTFTILISGCCRMSKYEEALCFFKEM-LDLRIPLSSEIYSSMICAYSKQGQLVKA 376
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
E ++ D V Y +++ Y + E+V ++
Sbjct: 377 ESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALY 415
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 163/371 (43%), Gaps = 31/371 (8%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K + + A ++ D M N G + +A + + K + A F +
Sbjct: 608 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHG--LCKSGRIEEACQFLEEMVS 665
Query: 172 T--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ + D YG+L+ A RA +A L+ +++ G+ ++ YN+++ K + ++
Sbjct: 666 SGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQ 725
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM--KVDKAVNPNWTTFST 287
+++ EM KG DV +YN + S G E+ + M +V + PN T+S
Sbjct: 726 AITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSV 785
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWNLY 343
+ K+G++++A E ++ + + D +P Y+ L + K+ + L
Sbjct: 786 LINGLCKVGRIDEARELIQEMMRKSC--DVLPNIITYNSFLD---GLCKQSMMAEACELM 840
Query: 344 RSVFPGV-----TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSW 396
RS+ G + + +I L + G + +F++ ++ Y P + N++M+
Sbjct: 841 RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIA--GGYVPNVVTYNVLMNG 898
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS 456
K ++A A S++++G P+ ++ L + + + EAL L G A+ G
Sbjct: 899 LCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHG-MASRGCTP 957
Query: 457 WRPKPVNVINF 467
NV+ F
Sbjct: 958 ------NVVTF 962
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 10/266 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y AL+N +A A +I+ M DKG + Y+V++ + K DE ++ M
Sbjct: 398 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 457
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+G +V ++N + C S S E + +F+ M + + P+ T+ T+ + G+
Sbjct: 458 SRGCTPNVVTFNSIIDGLCKSDRSGEAFQ-MFDDMALKHGLVPDKITYCTLIDGLFRTGR 516
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+AE L + D ++ ++ +G +V+N L + P + +
Sbjct: 517 AGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVP--DKVTF 570
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +I+ + G+ E +FEE ++ D ++ K G + A + +
Sbjct: 571 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 630
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
G PN ++ L G + RI EA
Sbjct: 631 LGVPPNVVTYNALVHGLCKSGRIEEA 656
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 128/298 (42%), Gaps = 18/298 (6%)
Query: 150 LDLIAKVHGVASAEDFFLSLPD----TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
LD + K A A + SL D D + L++ + A + D M
Sbjct: 330 LDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAG 389
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEK 264
GY + + YN ++ K + + +M+ M +KG+ DV +Y++ + + C + E
Sbjct: 390 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 449
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR----DRVPY 320
+E + + + PN TF+++ K +++ E+ + + D++ Y
Sbjct: 450 LELLHGM--ASRGCTPNVVTFNSIIDGLCKS---DRSGEAFQMFDDMALKHGLVPDKITY 504
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
L+ G+ + + + P ++ I+ L+++GD+ +++ L
Sbjct: 505 CTLIDGLFRTGRAGQAEALLD----AMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLE 560
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
++ D N++++ K GNF++A A F ++ + +P+ ++ L +G + ++
Sbjct: 561 LELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 618
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 126/301 (41%), Gaps = 27/301 (8%)
Query: 179 YGALLNAYVRARMRGNA-ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +L + RA A E+ +M G A + YN ++ K E + E+
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E+G DV +YN + S G E+ + M V PN T+S + K+G+
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCV-PNVVTYSVLINGLCKVGR 301
Query: 298 VEKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--- 350
+++A E ++ + + D +P Y+ L + K+ L RS+ G
Sbjct: 302 IDEARELIQEMTRKSC--DVLPNIITYNSFLD---GLCKQSMTAEACELMRSLRDGSLRV 356
Query: 351 --TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKA 406
+ + +I L + G I+ +F++ ++ Y P + N +++ K ++A
Sbjct: 357 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIA--GGYVPNVITYNALVNGLCKADKMERA 414
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVIN 466
A S++++G P+ ++ L + + R+ EAL L G A+ G NV+
Sbjct: 415 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG-MASRGCTP------NVVT 467
Query: 467 F 467
F
Sbjct: 468 F 468
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 102/261 (39%), Gaps = 44/261 (16%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+N + A +I+ M DKG + Y+V++ + K DE ++ M
Sbjct: 892 YNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMA 951
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+G +V ++N + C S S E + +F+ M + + P+ T+ T+ + G
Sbjct: 952 SRGCTPNVVTFNSIIDGLCKSDQSGEAFQ-MFDDMTLKHGLAPDKITYCTLIDGLFRTGW 1010
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+AE L P ++
Sbjct: 1011 AGQAEVLL---------------------------------------DAMPDPDTYAFNC 1031
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
I+ L+++GD+ + L ++ D N++++ K GNF++A A F ++ +
Sbjct: 1032 CINGLSKLGDV---SRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 1088
Query: 418 GKPNSTSWETLAEGHIRERRI 438
+P+ ++ L +G + ++
Sbjct: 1089 LQPDVMTFGALIDGLCKAGQV 1109
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 115/270 (42%), Gaps = 9/270 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++N ++ G L +++ ++G+ + YN ++ K + +E + +M
Sbjct: 219 YNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 278
Query: 239 EKGIRLDVYSYNIWLSSCGSQGST-EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +V +Y++ ++ G E E + E+ + V PN T+++ K
Sbjct: 279 SRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM 338
Query: 298 VEKAEE---SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+A E SLR R++ D V + L+ G+ +E V++ + P V
Sbjct: 339 TAEACELMRSLRDGSLRVS-PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNV-- 395
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+A+++ L + +E + E + + D ++++ + K D+A +
Sbjct: 396 ITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG 455
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ G PN ++ ++ +G + R EA
Sbjct: 456 MASRGCTPNVVTFNSIIDGLCKSDRSGEAF 485
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 80/205 (39%), Gaps = 10/205 (4%)
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
V YNI L S G T + +F V P T++T+ K ++ E
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLA 363
+ R D V Y+ L+ G EE R+ RS P V Y +I+ L
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVT--YSVLINGLC 297
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGG--- 418
++G I+ ++ +E P I N + K+ +A S + +G
Sbjct: 298 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS-LRDGSLRV 356
Query: 419 KPNSTSWETLAEGHIRERRILEALS 443
P++ ++ TL +G + +I EA S
Sbjct: 357 SPDTVTFSTLIDGLCKCGQIDEACS 381
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 9/205 (4%)
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G + ++S+N +L+ GS K +F ++ PN T+ST+ K G
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFR-SRLPPRCRPNHFTYSTLLRATYKAGG--D 162
Query: 301 AEESLRRVESRITGRDRVPYHYL----LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
E +L + V + + L G + E++R V P + Y+
Sbjct: 163 VERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVT--YN 220
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I+ L + ++ ++FEE + D N ++ K G+ ++A +
Sbjct: 221 TIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 280
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
PN ++ L G + RI EA
Sbjct: 281 SCVPNVVTYSVLINGLCKVGRIDEA 305
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 114/230 (49%), Gaps = 9/230 (3%)
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G +++ YN+++ L ++ + E S++ +M+ +G DV SY++ + E++
Sbjct: 247 GVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD---GYCQVEQL 303
Query: 266 EGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
V +LM+ K + PN T++++ + K G+V +AE+ LR ++++ D V Y L
Sbjct: 304 GKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTL 363
Query: 324 LSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+S +G G Y++++ + + P Y +MI L + G + K+F E LS
Sbjct: 364 ISGFGKSGNVSVEYKLFDEMKRKKIVPDFVT--YTSMIHGLCQAGKVVEARKLFSEMLSK 421
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
D ++ Y K G +A + N ++E+G PN ++ L +G
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDG 471
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 126/269 (46%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL++ Y +A A L ++M +KG + + Y ++ K E D ++
Sbjct: 426 DEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELL 485
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM EKG++ +V +YN ++ G+ E+ + E M + P+ T++T+ Y K
Sbjct: 486 HEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL-AGFFPDTITYTTIMDAYCK 544
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV--WNLYRSVFPGVTN 352
MG++ KA E LR + + V ++ L++ + G E+ R+ W L + + P T
Sbjct: 545 MGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATT 604
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+++++ ++ +I++ + D N+++ + K N +A
Sbjct: 605 --FNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKE 662
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
++E+G + S+ +L +G + ++ EA
Sbjct: 663 MVEKGFSLTAASYNSLIKGFYKRKKFEEA 691
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/322 (19%), Positives = 123/322 (38%), Gaps = 69/322 (21%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+ + A L+ +M +G + Y+V++ Y ++++ +V ++ E++
Sbjct: 255 YNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQ 314
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD----------------------- 275
KG++ + Y+YN +S G + E V +MK
Sbjct: 315 RKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVS 374
Query: 276 -----------KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
K + P++ T+++M + G+V +A + + S+ D V Y L+
Sbjct: 375 VEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALI 434
Query: 325 SLYGSVGKKEEVYRVWN------------LYRSVFPGVTNLG------------------ 354
Y G+ +E + + N Y ++ G+ G
Sbjct: 435 DGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQ 494
Query: 355 -----YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
Y+A+I+ L ++G+IE K+ EE D +M Y K G KA
Sbjct: 495 PNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHEL 554
Query: 410 FNSIIEEGGKPNSTSWETLAEG 431
++++G +P ++ L G
Sbjct: 555 LRIMLDKGLQPTIVTFNVLMNG 576
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 129/310 (41%), Gaps = 17/310 (5%)
Query: 150 LDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAEL---LIDKMRD 204
+ + K V AE + + D VY L++ + ++ GN + L D+M+
Sbjct: 329 ISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS---GNVSVEYKLFDEMKR 385
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
K + Y M+ + + E + SEM KG++ D +Y + G ++
Sbjct: 386 KKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKE 445
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
+ M V+K + PN T++ + K G+V+ A E L + + + Y+ L+
Sbjct: 446 AFSLHNQM-VEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALI 504
Query: 325 SLYGSVGKKEEVYRVWNL--YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ VG E+ ++ FP + Y ++ + ++G++ ++ + +
Sbjct: 505 NGLCKVGNIEQAVKLMEEMDLAGFFP--DTITYTTIMDAYCKMGEMAKAHELLR--IMLD 560
Query: 383 SSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
P I N++M+ + G + E ++++G PN+T++ +L + + +
Sbjct: 561 KGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRA 620
Query: 441 ALSCLKGAFA 450
+ KG A
Sbjct: 621 TIEIYKGMHA 630
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 107/241 (44%), Gaps = 7/241 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y AL+N + A L+++M G+ ++ Y +M Y K+ E + ++ M
Sbjct: 500 YNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIML 559
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KG++ + ++N+ ++ G E E + + M +DK + PN TTF+++ Y +
Sbjct: 560 DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWM-LDKGIMPNATTFNSLMKQYCIRNNM 618
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP---GVTNLGY 355
E + + ++ D Y+ L+ + K + W L++ + +T Y
Sbjct: 619 RATIEIYKGMHAQGVVPDTNTYNILIKGHC---KARNMKEAWFLHKEMVEKGFSLTAASY 675
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++I + E K+FEE + + I ++ + +EGN++ + IE
Sbjct: 676 NSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIE 735
Query: 416 E 416
+
Sbjct: 736 K 736
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y L+ + +AR A L +M +KG+++ + YN ++ + K K+++E
Sbjct: 633 VVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEAR 692
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
+ EM+ G + Y+I++ +G+ E
Sbjct: 693 KLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWE 724
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 130/257 (50%), Gaps = 1/257 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL++Y + L+ +M+ +G A + + YNV++ K E+++ + ++ EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G+++ Y+YN + ++G + + E M V K +P T+++ K+G+
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM-VLKGASPTVATYNSFIYGLCKLGR 354
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ A + L + + D V Y+ L+ Y +G + + +++ RS++ T + Y+
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ L R G++E +++ E ++ + D ++++ K G+ A+ FF+ ++ EG
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474
Query: 418 GKPNSTSWETLAEGHIR 434
+ +S ++ T G ++
Sbjct: 475 LELDSYAYATRIVGELK 491
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 139/323 (43%), Gaps = 16/323 (4%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LPD + Y L+ Y R A LL D++R + YN ++ + E +
Sbjct: 371 LPDVVS----YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 426
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ + EM +GI D+ +Y I ++ GS + F+ M + + + + ++T
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM-LHEGLELDSYAYATR 485
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
+K+G +A + ++ D + Y+ ++ +G EE + L + V
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASEL--LQKMVSD 543
Query: 349 GVTN--LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
GV + Y ++I + G + +IF E LS + +++ + +G ++A
Sbjct: 544 GVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERA 603
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVIN 466
+F+ + E+G PN ++ +L G + RR+ +A + FA K P N +
Sbjct: 604 FIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN----FFAEMVEKGIFP---NKYS 656
Query: 467 FFKACEEESDMGSKEAFVALLRQ 489
+ E +MG+ + ++L +Q
Sbjct: 657 YTILINENCNMGNWQEALSLYKQ 679
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 113/256 (44%), Gaps = 5/256 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N + A+ D+M +G + S Y + +K+ + S+
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQ 502
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM KG D+ YN+ + G+ E+ + + M V V P++ T++++ +++
Sbjct: 503 EEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKM-VSDGVIPDYVTYTSIIHAHLE 561
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
G++ K E + S+ V Y L+ + G+ E + ++ + + P V
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNV-- 619
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+++I+ L ++ ++ F E + + ++++ GN+ +A + +
Sbjct: 620 ITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQ 679
Query: 413 IIEEGGKPNSTSWETL 428
+++ G +P+S + L
Sbjct: 680 MLDRGVQPDSCTHSAL 695
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 172 TLKDRRVYGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ D Y ++++A++ R+R E+ + M KG + Y V++ + +
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYE-MLSKGLTPSVVTYTVLIHGHAGKGRLERA 603
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
SEM+EKGI +V +YN ++ ++ F M V+K + PN +++ +
Sbjct: 604 FIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM-VEKGIFPNKYSYTILIN 662
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
MG ++A +++ R D + LL G K + V+
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVH 709
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 12/287 (4%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
A + ++A+ +A A + P D Y AL++A+ RA +A + +M D G
Sbjct: 127 ATAIRVMARAGRLAEASALLDAAPGP--DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSG 184
Query: 207 YAVHSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ YNV++ +Y K+ + EV +V+ MKE G+ D Y+YN +S C + ++
Sbjct: 185 VQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEA 244
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
VF+ MK P+ TF+++ +Y K + ++A E ++ +E V Y+ L+S
Sbjct: 245 AQVFDEMKAS-GFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLIS 303
Query: 326 LYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
Y G E+ + + + P V Y +IS L R G I+ ++E V++
Sbjct: 304 SYVKDGLLEQAVALKQEMEVKGMKPDVVT--YTTLISGLDRAGKIDAAIVEYDEM--VRN 359
Query: 384 SYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
P + N ++ + G F + A F+ G P+ +W TL
Sbjct: 360 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTL 406
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 159/402 (39%), Gaps = 49/402 (12%)
Query: 44 RQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGS--ASVLNDWEKGG 101
R K P + + S G V ++ WN + L++ L S + V + +K G
Sbjct: 378 RGKFPEMMAVFDEFRSAGFVP----DIVTWNTL---LAVFGQNGLDSEVSGVFKEMKKAG 430
Query: 102 RSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS 161
+ ++ + + A+++Y M G +S +A L +A+
Sbjct: 431 YIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAV--LSALARGGRWEQ 488
Query: 162 AEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AE F + D D Y +LL+AY A+ + L D + + H+ ++
Sbjct: 489 AEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVL 548
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
+ K+ E E E+++K LD+ N +S G K+E + LMK + A+N
Sbjct: 549 VNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMK-ESAIN 607
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
+ T++++ MY ++G EK E L ++S DR Y+ ++ YG G+ +E R
Sbjct: 608 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR- 666
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+F E D N+ + YV
Sbjct: 667 ----------------------------------LFSEMKCSGLKPDVVTYNIFVKSYVS 692
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F++A ++ +G KPN ++ ++ EG+ R ++ +A
Sbjct: 693 NSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 734
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 169/408 (41%), Gaps = 68/408 (16%)
Query: 87 QLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
+L AS L D G + L V + R++ A+ V+ M + G + + +
Sbjct: 138 RLAEASALLDAAPGPDAGAYTAL---VSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNV 194
Query: 147 AIQL------------DLIA--KVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
+ + +L+A K HGVA DR Y L++ R +
Sbjct: 195 VLHVYSKMAVPWKEVVELVASMKEHGVAP-------------DRYTYNTLISCCRRRALY 241
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
A + D+M+ G+ + +N ++ +Y K + +DE ++ EM+ G V +YN
Sbjct: 242 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 301
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+SS G E+ + + M+V K + P+ T++T+ + + G+++ A +
Sbjct: 302 ISSYVKDGLLEQAVALKQEMEV-KGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 360
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--------------------------- 345
+ Y+ L+ ++G GK E+ V++ +RS
Sbjct: 361 CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVS 420
Query: 346 -VFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
VF + G Y ++ISS +R G + +I++ + D N ++S
Sbjct: 421 GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSAL 480
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI--LEALS 443
+ G +++AE F + E KP+ S+ +L + +R+ ++ALS
Sbjct: 481 ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS 528
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 146/326 (44%), Gaps = 7/326 (2%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ +R Y +L+++Y R + A + +M + G YN +++ + +++ E
Sbjct: 432 IPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEK 491
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ +EM+E+ + D YSY+ L + + +KM+ + + + ++ NW T+ +
Sbjct: 492 LFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLV-KTLVLVN 550
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K+ + +AE++ + + D + ++S+YG +V ++ +L + ++
Sbjct: 551 SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSA 610
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y++++ +R+GD E E I E S D N ++ Y ++G +A F+
Sbjct: 611 ATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSE 670
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACE 472
+ G KP+ ++ + ++ EA+ ++ +G K P + +
Sbjct: 671 MKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR-YMVTQGCK---PNERTYNSIVEGYC 726
Query: 473 EESDMGSKEAFVALLRQ--PGYRKEK 496
+ + FV+ L Q PGY K++
Sbjct: 727 RNGKLTDAKIFVSNLPQLHPGYSKQE 752
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 123/264 (46%), Gaps = 3/264 (1%)
Query: 179 YGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A + Y R + G AE+L M +G A + + Y +++ + I + +E + + EM
Sbjct: 267 YNAFIEGYFKRLDLGGVAEILT-LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 325
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+EKGI DVY Y +S G+ ++ +F+ M DK + P+ T+ + K GQ
Sbjct: 326 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM-TDKGLIPSAHTYGALIHGVCKAGQ 384
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+E A+ + ++ + + V ++ L+ Y G +E R+ + Y++
Sbjct: 385 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS 444
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+ S L ++ + + + + S + ++ Y KEGNF +A+ F + E+G
Sbjct: 445 IASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG 504
Query: 418 GKPNSTSWETLAEGHIRERRILEA 441
PN ++ L +G+ + + EA
Sbjct: 505 NVPNIITYNVLIDGYSKRGNMKEA 528
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 163/368 (44%), Gaps = 18/368 (4%)
Query: 70 MIKWNAI----FRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHA 125
++ +NA F++L L G A +L EK G + ++ + + A
Sbjct: 264 VVTYNAFIEGYFKRLDLG-----GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEA 318
Query: 126 LEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALL 183
+++ M +G + + I + + V A F + D + YGAL+
Sbjct: 319 QRLFEEMREKGIEADVYVYTSIISCN--CRSGNVKRALVLFDEMTDKGLIPSAHTYGALI 376
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR 243
+ +A A++L+++M+ KG ++ + +N ++ Y + DE + M++KG+
Sbjct: 377 HGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLE 436
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
DV++YN S ++ +G+ M V++ V+PN +F+T+ +Y K G +A+
Sbjct: 437 SDVFAYNSIASGLCKLNRKDEAKGLLFSM-VERGVSPNTMSFTTLIDIYCKEGNFVEAKR 495
Query: 304 SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISS 361
R +E + + + Y+ L+ Y G +E +++ + R + P V ++I
Sbjct: 496 VFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTC--TSLIHG 553
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
G ++ K+F+E + M+S K+G ++A ++ + E G P+
Sbjct: 554 ECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPD 613
Query: 422 STSWETLA 429
T + +L
Sbjct: 614 DTVYSSLV 621
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 12/287 (4%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
A + ++A+ +A A + P D Y AL++A+ RA +A + +M D G
Sbjct: 145 ATAIRVMARAGRLAEASALLDAAPGP--DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSG 202
Query: 207 YAVHSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ YNV++ +Y K+ + EV +V+ MKE G+ D Y+YN +S C + ++
Sbjct: 203 VQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEA 262
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
VF+ MK P+ TF+++ +Y K + ++A E ++ +E V Y+ L+S
Sbjct: 263 AQVFDEMKAS-GFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLIS 321
Query: 326 LYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
Y G E+ + + + P V Y +IS L R G I+ ++E V++
Sbjct: 322 SYVKDGLLEQAVALKQEMEVKGMKPDVVT--YTTLISGLDRAGKIDAAIVEYDEM--VRN 377
Query: 384 SYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
P + N ++ + G F + A F+ G P+ +W TL
Sbjct: 378 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTL 424
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 159/402 (39%), Gaps = 49/402 (12%)
Query: 44 RQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGS--ASVLNDWEKGG 101
R K P + + S G V ++ WN + L++ L S + V + +K G
Sbjct: 396 RGKFPEMMAVFDEFRSAGFVP----DIVTWNTL---LAVFGQNGLDSEVSGVFKEMKKAG 448
Query: 102 RSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS 161
+ ++ + + A+++Y M G +S +A L +A+
Sbjct: 449 YIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAV--LSALARGGRWEQ 506
Query: 162 AEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AE F + D D Y +LL+AY A+ + L D + + H+ ++
Sbjct: 507 AEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVL 566
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
+ K+ E E E+++K LD+ N +S G K+E + LMK + A+N
Sbjct: 567 VNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMK-ESAIN 625
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
+ T++++ MY ++G EK E L ++S DR Y+ ++ YG G+ +E R
Sbjct: 626 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR- 684
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+F E D N+ + YV
Sbjct: 685 ----------------------------------LFSEMKCSGLKPDVVTYNIFVKSYVS 710
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F++A ++ +G KPN ++ ++ EG+ R ++ +A
Sbjct: 711 NSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 169/408 (41%), Gaps = 68/408 (16%)
Query: 87 QLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
+L AS L D G + L V + R++ A+ V+ M + G + + +
Sbjct: 156 RLAEASALLDAAPGPDAGAYTAL---VSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNV 212
Query: 147 AIQL------------DLIA--KVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
+ + +L+A K HGVA DR Y L++ R +
Sbjct: 213 VLHVYSKMAVPWKEVVELVASMKEHGVAP-------------DRYTYNTLISCCRRRALY 259
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
A + D+M+ G+ + +N ++ +Y K + +DE ++ EM+ G V +YN
Sbjct: 260 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 319
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+SS G E+ + + M+V K + P+ T++T+ + + G+++ A +
Sbjct: 320 ISSYVKDGLLEQAVALKQEMEV-KGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 378
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--------------------------- 345
+ Y+ L+ ++G GK E+ V++ +RS
Sbjct: 379 CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVS 438
Query: 346 -VFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
VF + G Y ++ISS +R G + +I++ + D N ++S
Sbjct: 439 GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSAL 498
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI--LEALS 443
+ G +++AE F + E KP+ S+ +L + +R+ ++ALS
Sbjct: 499 ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS 546
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 146/326 (44%), Gaps = 7/326 (2%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ +R Y +L+++Y R + A + +M + G YN +++ + +++ E
Sbjct: 450 IPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEK 509
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ +EM+E+ + D YSY+ L + + +KM+ + + + ++ NW T+ +
Sbjct: 510 LFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLV-KTLVLVN 568
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K+ + +AE++ + + D + ++S+YG +V ++ +L + ++
Sbjct: 569 SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSA 628
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y++++ +R+GD E E I E S D N ++ Y ++G +A F+
Sbjct: 629 ATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSE 688
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACE 472
+ G KP+ ++ + ++ EA+ ++ +G K P + +
Sbjct: 689 MKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR-YMVTQGCK---PNERTYNSIVEGYC 744
Query: 473 EESDMGSKEAFVALLRQ--PGYRKEK 496
+ + FV+ L Q PGY K++
Sbjct: 745 RNGKLTDAKIFVSNLPQLHPGYSKQE 770
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 127/252 (50%), Gaps = 2/252 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEM 237
Y AL+NAY R + L+++M+ + + + L YN ++ + +++ + + +EM
Sbjct: 186 YTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEM 245
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +G++ D+ +YN LS+C ++G ++ E VF+ M ++ + P TT+S + + K+G+
Sbjct: 246 RHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTM-IEGGIVPEITTYSYIVETFGKLGK 304
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+EK L+ +ES D Y+ L+ + +G +E V+ ++ Y
Sbjct: 305 LEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSI 364
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+++ + G + + ++F + + D N+++ + + G F + F+ +++E
Sbjct: 365 LLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDEN 424
Query: 418 GKPNSTSWETLA 429
PN ++E L
Sbjct: 425 IDPNMETYEGLV 436
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 121/258 (46%), Gaps = 8/258 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ +Y +++ R + + D+M +G Y ++ Y + +Y+ ++
Sbjct: 147 NEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELL 206
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGST--EKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
MK + + ++ +YN +++C ++G E + G+F M+ + V P+ T++T+ +
Sbjct: 207 ERMKRERVSPNILTYNTVINAC-ARGDLDWEGLLGLFAEMR-HEGVQPDLVTYNTLLSAC 264
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGV 350
G ++AE + + + Y Y++ +G +GK E+V + S P +
Sbjct: 265 AARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDI 324
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
++ Y+ +I + A++G I+ +F++ + + +++++ Y K G +D F
Sbjct: 325 SS--YNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELF 382
Query: 411 NSIIEEGGKPNSTSWETL 428
+ E +P++T++ L
Sbjct: 383 LQMKESSAEPDATTYNIL 400
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 119/262 (45%), Gaps = 5/262 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y LL+A + AE++ M + G Y+ ++ + K+ + ++V ++
Sbjct: 253 DLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLL 312
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+ +G D+ SYN+ + + GS ++ VF+ M+ V PN +T+S + +Y K
Sbjct: 313 KEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCV-PNASTYSILLNLYGK 371
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G+ + E +++ D Y+ L+ ++G G +EV +++ + ++ P +
Sbjct: 372 HGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMET 431
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y ++ + + G E +KI + + ++ Y + +D+A FN+
Sbjct: 432 --YEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNT 489
Query: 413 IIEEGGKPNSTSWETLAEGHIR 434
+ E G K ++ +L R
Sbjct: 490 MNEVGSKSTIDTYNSLIHTFAR 511
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 9/238 (3%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y L+ A+ + A + +M+ G ++ Y++++ LY K YD+V
Sbjct: 321 LPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRE 380
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ +MKE D +YNI + G G +++ +F + VD+ ++PN T+ +
Sbjct: 381 LFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL-VDENIDPNMETYEGLVFAC 439
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
K G E A +++ + G+ VP Y L+ YG +E +N V
Sbjct: 440 GKGGLHEDA----KKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGS 495
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
T Y+++I + AR G + E I S + + + ++ Y + G +++A
Sbjct: 496 KSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEA 553
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 7/192 (3%)
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
RL + +++ ++G ++ +F+ M+ PN ++ + ++ + G +EK
Sbjct: 109 RLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCS 168
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMIS 360
E + S+ R Y L++ YG G+ E + + V P + L Y+ +I+
Sbjct: 169 EIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNI--LTYNTVIN 226
Query: 361 SLARIGDI--EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ AR GD+ EG+ +F E D N ++S G D+AE F ++IE G
Sbjct: 227 ACAR-GDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGI 285
Query: 419 KPNSTSWETLAE 430
P T++ + E
Sbjct: 286 VPEITTYSYIVE 297
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ALL A RARM A + ++M G A+++ YN M+ + +K ++ E ++
Sbjct: 145 DAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTHVYNAMLHVCLKARDALRAEGLM 204
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M G+ LD +S+N ++ +G + V E M+ D+ V P+ T++T+ K
Sbjct: 205 TRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQ-DEGVEPDIVTWNTVIHGLCK 263
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTN 352
G++++A + + + D V Y L+ Y +G E ++ + + PGV
Sbjct: 264 EGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVAT 323
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+A+I L G ++ + + E K D N +++ Y K G+ A
Sbjct: 324 --YNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKR 381
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
++E G + + +++ L G + + + EA
Sbjct: 382 MMESGLQLDQFTYKALIHGFCKAKELDEA 410
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 134/317 (42%), Gaps = 5/317 (1%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRV 178
R A V+D M RG A L +A+ A+A F + + V
Sbjct: 126 RPHDAARVFDQMRARG--LAPDAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTHV 183
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y A+L+ ++AR AE L+ +M G + +N ++ LY++ E + M+
Sbjct: 184 YNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQ 243
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++G+ D+ ++N + +G ++ + M + AV P+ T++T+ Y ++G V
Sbjct: 244 DEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDM-IAAAVEPDTVTYTTLVDGYCRIGDV 302
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+A + +E+ Y+ ++ GK +EV + + ++ + +
Sbjct: 303 GEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTL 362
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I+S A+ GD+ K+ + + D ++ + K D+A+ ++ G
Sbjct: 363 INSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRGF 422
Query: 419 KPNSTSWETLAEGHIRE 435
PN + + L +G ++
Sbjct: 423 SPNYSVFSWLVDGFCKK 439
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 140/329 (42%), Gaps = 15/329 (4%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAED----FFL 167
V+ L K ++Y A+E++ M + R D +I ED F
Sbjct: 176 VIHCLIKVKQYGQAIEIFSSMREKRSECR---PDVVTFTSIIHLYSVRGQIEDCKAVFST 232
Query: 168 SLPDTLKDRRV-YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
L + +K V Y AL++AY M A + D+M+ G+ + Y +++ + + ++
Sbjct: 233 MLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQ 292
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+ MK + ++ SYN + + GS G + + M+ D ++PN +
Sbjct: 293 PARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQD-GIHPNVVSIC 351
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
T+ + GQ + L E R + + + + Y ++G+ E + NLYRS+
Sbjct: 352 TLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYE---KAINLYRSM 408
Query: 347 FPGVT---NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
T ++ + +IS R+ E F+E L ++ I + M+ Y K+G
Sbjct: 409 ENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQL 468
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
KAE+ FNS+ G P+ ++ + +
Sbjct: 469 VKAESLFNSLKGSGCCPDLVTYTAMINAY 497
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 162/368 (44%), Gaps = 20/368 (5%)
Query: 113 VKELRKFRRYKHALEVYDWMNNRGERFRLSASDA-AIQLDLIAKVHGVASAEDFFLSLPD 171
+KEL + +H ++V+DWM N +R + +D + + L A+ + + A F +
Sbjct: 1 MKELTQIGSIEHCVQVFDWMKN--QRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQK 58
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D Y AL+NA+ RA A +++ M +N ++ + E
Sbjct: 59 WRCKPDVETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWRE 118
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ +M + G+ D+ ++NI LS+ S K FELMK + P+ TT + +
Sbjct: 119 ALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMK-GTNIRPDTTTLNIVI 177
Query: 290 TMYIKMGQVEKAEESLRRV-ESRITGR-DRVPYHYLLSLYGSVGKKEEVYRVWN--LYRS 345
IK+ Q +A E + E R R D V + ++ LY G+ E+ V++ L
Sbjct: 178 HCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEG 237
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNF 403
+ P + + Y+A+IS+ A G + +F+E +S + P + + ++S + +
Sbjct: 238 IKPNI--VSYNALISAYASHGMDKEAFSVFDEM--KRSGFCPDVVSYTSLISTFGRSQQP 293
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVN 463
+A F+ + KPN S+ L + + + +A+ L+ +G P V+
Sbjct: 294 ARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILR-EMEQDGI---HPNVVS 349
Query: 464 VINFFKAC 471
+ AC
Sbjct: 350 ICTLLAAC 357
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 137/340 (40%), Gaps = 44/340 (12%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V+ + +Y AL ++ M +G R + I + + KV A + F S+ +
Sbjct: 141 VLSAYKSGAQYSKALSYFELM--KGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMRE 198
Query: 172 TLKDRR----VYGALLNAY-VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ R + ++++ Y VR ++ + + + M +G + + YN +++ Y
Sbjct: 199 KRSECRPDVVTFTSIIHLYSVRGQIE-DCKAVFSTMLAEGIKPNIVSYNALISAYASHGM 257
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
E S+ EMK G DV SY +S+ G + VF++MK +K PN +++
Sbjct: 258 DKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKC-KPNLVSYN 316
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
+ Y G + +A + LR +E + V LL+ G G+K + SV
Sbjct: 317 ALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNI-------DSV 369
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
G H ++++A N + Y+ G ++KA
Sbjct: 370 LSAAELRGIH--LNTIA--------------------------CNSAIGSYMNIGEYEKA 401
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ S+ + KP+S ++ L G R + EAL K
Sbjct: 402 INLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFK 441
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
LL A R + N + ++ +G ++++ N + YM I EY++ ++ M+ K
Sbjct: 352 TLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENK 411
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
+ D ++ I +S C E+ F+ M +D + + +S+M Y K GQ+ K
Sbjct: 412 TTKPDSVTFTILISGCCRMSKYEEALCFFKEM-LDLRIPLSSEIYSSMICAYSKQGQLVK 470
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
AE ++ D V Y +++ Y + E+V ++
Sbjct: 471 AESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALY 510
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 9/295 (3%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y A++ + M A LI + KG + YN+++ ++ ++DE E
Sbjct: 239 LPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEK 298
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+V+EM +G + +Y+I +SS G ++ V ++M ++K + P+ ++ + +
Sbjct: 299 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVM-IEKELTPDTYSYDPLISAL 357
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF--PGV 350
K G+++ A + + S D V Y+ +L+ G + ++N R + P V
Sbjct: 358 CKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNV 417
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
++ Y+ MIS+L GD + +S D N ++S ++G ++A
Sbjct: 418 SS--YNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLL 475
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVI 465
+ + + G +P S+ + G + RRI +A+ G FA K RP I
Sbjct: 476 DDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI----GMFAEMIEKGCRPNETTYI 526
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 153/354 (43%), Gaps = 28/354 (7%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
T D Y A+++ + + A ++++M+ +G+ + YN+M+ ++
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ ++ V +Y I + + +G + + E M + + + P+ T++ +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM-LARGLLPDMYTYNAIIRG 251
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
K G VE+A E + + S+ D + Y+ LL + + GK +E ++ S
Sbjct: 252 MCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPN 311
Query: 352 NLGYHAMISSLARIGDIEG----MEKIFEEWLSVKS-SYDPRIANLMMSWYVKEGNFDKA 406
+ Y +ISSL R G I+ ++ + E+ L+ + SYDP I+ L KEG D A
Sbjct: 312 KVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL-----CKEGRLDLA 366
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRE---RRILEALSCLKGAFAAEGAKSWRPKPVN 463
+ +I G P+ ++ T+ + + LE + L+G S+
Sbjct: 367 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN----T 422
Query: 464 VINFFKACEEES-DMGSKEAFVALLRQPGYRKEKDYMSLI------GLTDEAVA 510
+I+ +C + S +G A ++ P E Y SLI GL +EA+
Sbjct: 423 MISALWSCGDRSRALGMVPAMISKGVDP---DEITYNSLISCLCRDGLVEEAIG 473
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 81/189 (42%), Gaps = 14/189 (7%)
Query: 261 STEKMEGVFELMKVDKA----------VNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
T+ ++G F ++KA P+ ++ + + + K+ ++E A + L R+++
Sbjct: 106 CTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKA 165
Query: 311 RITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDI 368
R D V Y+ ++ + K +V + L + P V + Y +I + G I
Sbjct: 166 RGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTV--ITYTILIEATIVEGGI 223
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
K+ EE L+ D N ++ KEG ++A S+ +G KP+ S+ L
Sbjct: 224 NEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNIL 283
Query: 429 AEGHIRERR 437
+ + +
Sbjct: 284 LRAFLNQGK 292
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L++ R + A L+D M G+ + YN+++ K++ D+ M
Sbjct: 451 DEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMF 510
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQG-STEKME 266
+EM EKG R + +Y + + G G TE ME
Sbjct: 511 AEMIEKGCRPNETTYILLIEGIGFAGWRTEAME 543
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 146/347 (42%), Gaps = 22/347 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL++ +++A NA ++D+M+ +G+ + YN+M+ + + D +
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIF 196
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ + V +Y I + + G + + + M + K + P+ T++ + K
Sbjct: 197 EELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEM-LSKGLEPDTLTYNAIIRGMCK 255
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
V+KA E LR + SR D + Y+ LL S GK E ++ + S+ +
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315
Query: 355 YHAMISSLARIGDIEGMEKIF----EEWLSVKS-SYDPRIANLMMSWYVKEGNFDKAEAF 409
+ +I +L R G +E + E+ L + YDP IA + +EG D A F
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAG-----FCREGRLDLATEF 370
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFK 469
+I +G P+ ++ T+ G R + +AL F P + F
Sbjct: 371 LEYMISDGCLPDIVNYNTIMAGLCRTGKADQALE----VFEKLDEVGCPPNVSSYNTLFS 426
Query: 470 ACEEESD-MGSKEAFVALLRQPGYRKEKDYMSLI------GLTDEAV 509
A D + E + LL Q E Y SLI G+ DEA+
Sbjct: 427 ALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAI 473
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 128/298 (42%), Gaps = 13/298 (4%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PDTL Y A++ + M A L+ + +G + YN+++ + ++ E
Sbjct: 241 PDTL----TYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSE 296
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
E ++SEM G + +V +++I + + G E+ + MK +K + P+ + +
Sbjct: 297 GEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMK-EKGLKPDAYCYDPLI 355
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-- 347
+ + G+++ A E L + S D V Y+ +++ GK ++ V+ V
Sbjct: 356 AGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCP 415
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P V++ Y+ + S+L GD ++ + L+ D N ++S ++G D+A
Sbjct: 416 PNVSS--YNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAI 473
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVI 465
+ +PN S+ + G + R +A+ L AA K +P I
Sbjct: 474 ELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVL----AAMTEKGCQPNETTYI 527
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 6/205 (2%)
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+Y+E + M +KG DV + + + K V E++ ++ P+ +
Sbjct: 84 KYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEIL--ERYGKPDVFAY 141
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LY 343
+ + + +IK Q+E A L R++SR D V Y+ ++ + S GK + ++ L
Sbjct: 142 NALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLK 201
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+ P V + Y +I + G I+ K+ +E LS D N ++ KE
Sbjct: 202 DNCEPTV--ITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMV 259
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETL 428
DKA S+ G KP+ ++ L
Sbjct: 260 DKAFELLRSLSSRGCKPDIITYNIL 284
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 5/282 (1%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
L + L + YGA++N + + + L+ +M ++G V YN ++ K
Sbjct: 233 LKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGC 292
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
E V M + G D+ +YNI ++ S G K E + E + + + PN +++
Sbjct: 293 RIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLE-QAIKRGLLPNKVSYT 351
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYR 344
+ Y K G+ +A + L ++ R D V Y L+ G+ + V N + +
Sbjct: 352 PLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEK 411
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
V P N+ Y+ ++S L + G + + + E L + D I ++ +++ G+F+
Sbjct: 412 GVLPD-ANI-YNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFE 469
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+A+ F IE+G P + + +G+ + + +AL C K
Sbjct: 470 EAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFK 511
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 5/259 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL++ + A A + +KM +KG + YNV+M+ K + ++
Sbjct: 381 DLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLL 440
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM ++ + D + + G E+ + +FEL ++K ++P ++ M Y K
Sbjct: 441 AEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFEL-TIEKGIDPGVVGYNAMIKGYCK 499
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
G ++ A +R+ + D Y ++ Y + R++ L + P V
Sbjct: 500 FGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVT 559
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y +I+ GDI EK F++ LS++ + +++ + K N KA +FF
Sbjct: 560 --YTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQ 617
Query: 413 IIEEGGKPNSTSWETLAEG 431
++ E PN ++ L G
Sbjct: 618 MLMEKCLPNDVTYNYLMNG 636
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 116/285 (40%), Gaps = 15/285 (5%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F+ + + D +LLN V+ A + D+M D+ V + +M+ K
Sbjct: 127 FIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEG 186
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ ++ ++ + +G ++ YN + +G TE+ +F+ +K+ K P T+
Sbjct: 187 KVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKM-KGFLPTVKTY 245
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV--WNLY 343
+ + K G+ E ++ L + R Y+ ++ G + E W +
Sbjct: 246 GAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIK 305
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE-----WLSVKSSYDPRIANLMMSWYV 398
P + Y+ +I+ G++ E++ E+ L K SY P I N Y
Sbjct: 306 SGCDPDMAT--YNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHN-----YC 358
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
K+G + +A + E G KP+ ++ L G I + AL+
Sbjct: 359 KQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALT 403
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 147/320 (45%), Gaps = 9/320 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ALL + +A A ++ +M D G ++ YN + Y + ++E + M
Sbjct: 197 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 256
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ + ++YN +++ + G ++ +F+ MK + V PN T++ + M K +
Sbjct: 257 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYV-PNVNTYNLIFGMLGKKSR 315
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E L + +RV ++ +L++ G G ++ V RV N +S ++ Y+
Sbjct: 316 FTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNT 375
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIE 415
+IS+ R G K+++E +S S + P + N +++ ++G++ A++ + +++
Sbjct: 376 LISAYGRCGSRTYAFKMYDEMIS--SGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLK 433
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEES 475
G KPN S+ L + + + S K + SW VI FK E
Sbjct: 434 NGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLE- 492
Query: 476 DMGSKEAFVALLRQPGYRKE 495
G ++AF + Q GY+ +
Sbjct: 493 --GVEKAFQEVKAQ-GYKPD 509
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 20/314 (6%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-------PDTLKDRR 177
AL + W ++ G A+DAA L+++ + G D L P + D R
Sbjct: 38 ALALLRWASDEG------AADAA-ALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVR 90
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI-KEYDEVESMVSE 236
Y +L+A RA A L ++R +G + YNV++ +Y ++ + + + +++ E
Sbjct: 91 AYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 150
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M+ G+ D ++ + +++CG G ++ FE +K V P T++ + ++ K G
Sbjct: 151 MRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHV-PCVVTYNALLQVFGKAG 209
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+A L+ +E D V Y+ L Y G EE + + S Y+
Sbjct: 210 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYN 269
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
++++ A +G ++ +F+ K+ Y P + NL+ K+ F +
Sbjct: 270 TVMTAYANVGRVDEALALFDRM--KKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMS 327
Query: 415 EEGGKPNSTSWETL 428
G PN +W T+
Sbjct: 328 RSGCTPNRVTWNTM 341
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 13/292 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L Y RA A +D M KG ++ YN +MT Y + DE ++
Sbjct: 229 DAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALF 288
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MK+ G +V +YN+ G + M + E M PN T++TM + K
Sbjct: 289 DRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMS-RSGCTPNRVTWNTMLAVCGK 347
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVF-PGVTN 352
G + L ++S R Y+ L+S YG G + +++++ + S F P +T
Sbjct: 348 RGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTT 407
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP--RIANLMMSWYVKEGNFDKAEAFF 410
Y+A+++ L+R GD + I + L K+ + P + +L++ Y K GN E+
Sbjct: 408 --YNALLNVLSRQGDWSTAQSIVSKML--KNGFKPNDQSYSLLLQCYAKGGNAAGIESIE 463
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
+ P+ TL + + RR L ++ AF A+ ++P V
Sbjct: 464 KEVYVGTIFPSWVILRTLVIANFKCRR----LEGVEKAFQEVKAQGYKPDLV 511
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 145/323 (44%), Gaps = 13/323 (4%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD 175
L K R+ LE+ + M+ G + + + + V G ED+ + + +K
Sbjct: 310 LGKKSRFTAMLEMLEEMSRSG------CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKS 363
Query: 176 ------RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
R Y L++AY R R A + D+M G+ YN ++ + + ++
Sbjct: 364 CGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWST 423
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+S+VS+M + G + + SY++ L G+ +E + + + V + P+W T+
Sbjct: 424 AQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVG-TIFPSWVILRTLV 482
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K ++E E++ + V+++ D V ++ +L++Y G + +++ +
Sbjct: 483 IANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLS 542
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y++++ A+ + EKI ++ S + D N +++ + K+G +A+
Sbjct: 543 PDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRI 602
Query: 410 FNSIIEEGGKPNSTSWETLAEGH 432
+ +I +G P ++ TL G+
Sbjct: 603 LSEMIADGMAPCVVTYHTLVGGY 625
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 142/379 (37%), Gaps = 61/379 (16%)
Query: 122 YKHALEVYDWMNNRGERFRL--SASDAAIQLDLIA--KVHGVASAEDFF---------LS 168
Y L+V+ N E R+ D+ Q D + ++ G + FF ++
Sbjct: 198 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 257
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
L + Y ++ AY A L D+M+ GY + YN++ + K +
Sbjct: 258 SKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFT 317
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--------------- 273
+ M+ EM G + ++N L+ CG +G + + V MK
Sbjct: 318 AMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLI 377
Query: 274 -------------------VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ P TT++ + + + G A+ + ++
Sbjct: 378 SAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFK 437
Query: 315 RDRVPYHYLLSLYGSVGK-------KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD 367
+ Y LL Y G ++EVY ++FP L ++ + +
Sbjct: 438 PNDQSYSLLLQCYAKGGNAAGIESIEKEVY-----VGTIFPSWVIL--RTLVIANFKCRR 490
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
+EG+EK F+E + D I N M++ Y K G + KA F+SI + G P+ ++ +
Sbjct: 491 LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNS 550
Query: 428 LAEGHIRERRILEALSCLK 446
L + + + EA LK
Sbjct: 551 LMDMYAKSNESWEAEKILK 569
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L+ A + R E +++ +GY + +N M+ +Y K Y + M +K+ G
Sbjct: 481 LVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSG 540
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ D+ +YN + + + E + + +K + V P+ +++T+ + K G +++A
Sbjct: 541 LSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQ-VKPDVVSYNTVINGFCKQGLIKEA 599
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMI 359
+ L + + V YH L+ Y S+ E V N ++ ++ P L Y ++
Sbjct: 600 QRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKP--MELTYRRVV 657
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
S + + + E ++D ++ + M+ +K+ F +
Sbjct: 658 DSYCKAKRYDEAREFLSEISDTDQNFDQKLQH-MLEARIKDAQFGR 702
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ++ ++L Y + + A + D ++ G + + YN +M +Y K E E E ++
Sbjct: 509 DLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKIL 568
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++K ++ DV SYN ++ QG ++ + + M D + P T+ T+ Y
Sbjct: 569 KQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 627
Query: 295 MGQVEKAEE 303
+ +A E
Sbjct: 628 LEMFNEARE 636
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 127/252 (50%), Gaps = 2/252 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEM 237
Y AL+NAY R + L+++M+ + + + L YN ++ + +++ + + +EM
Sbjct: 186 YTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEM 245
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +G++ D+ +YN LS+C ++G ++ E VF+ M ++ + P TT+S + + K+G+
Sbjct: 246 RHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTM-IEGGIVPEITTYSYIVETFGKLGK 304
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+EK L+ +ES D Y+ L+ + +G +E V+ ++ Y
Sbjct: 305 LEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSI 364
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+++ + G + + ++F + + D N+++ + + G F + F+ +++E
Sbjct: 365 LLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDEN 424
Query: 418 GKPNSTSWETLA 429
PN ++E L
Sbjct: 425 IDPNMETYEGLV 436
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 121/258 (46%), Gaps = 8/258 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ +Y +++ R + + D+M +G Y ++ Y + +Y+ ++
Sbjct: 147 NEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELL 206
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGST--EKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
MK + + ++ +YN +++C ++G E + G+F M+ + V P+ T++T+ +
Sbjct: 207 ERMKRERVSPNILTYNTVINAC-ARGDLDWEGLLGLFAEMR-HEGVQPDLVTYNTLLSAC 264
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGV 350
G ++AE + + + Y Y++ +G +GK E+V + S P +
Sbjct: 265 AARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDI 324
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
++ Y+ +I + A++G I+ +F++ + + +++++ Y K G +D F
Sbjct: 325 SS--YNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELF 382
Query: 411 NSIIEEGGKPNSTSWETL 428
+ E +P++T++ L
Sbjct: 383 LQMKESSAEPDATTYNIL 400
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 119/262 (45%), Gaps = 5/262 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y LL+A + AE++ M + G Y+ ++ + K+ + ++V ++
Sbjct: 253 DLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLL 312
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+ +G D+ SYN+ + + GS ++ VF+ M+ V PN +T+S + +Y K
Sbjct: 313 KEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCV-PNASTYSILLNLYGK 371
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G+ + E +++ D Y+ L+ ++G G +EV +++ + ++ P +
Sbjct: 372 HGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMET 431
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y ++ + + G E +KI + + ++ Y + +D+A FN+
Sbjct: 432 --YEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNT 489
Query: 413 IIEEGGKPNSTSWETLAEGHIR 434
+ E G K ++ +L R
Sbjct: 490 MNEVGSKSTIDTYNSLIHTFAR 511
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 9/238 (3%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y L+ A+ + A + +M+ G ++ Y++++ LY K YD+V
Sbjct: 321 LPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRE 380
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ +MKE D +YNI + G G +++ +F + VD+ ++PN T+ +
Sbjct: 381 LFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL-VDENIDPNMETYEGLVFAC 439
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
K G E A +++ + G+ VP Y L+ YG +E +N V
Sbjct: 440 GKGGLHEDA----KKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGS 495
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
T Y+++I + AR G + E I S + + + ++ Y + G +++A
Sbjct: 496 KSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEA 553
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 7/192 (3%)
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
RL + +++ ++G ++ +F+ M+ PN ++ + ++ + G +EK
Sbjct: 109 RLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCS 168
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMIS 360
E + S+ R Y L++ YG G+ E + + V P + L Y+ +I+
Sbjct: 169 EIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNI--LTYNTVIN 226
Query: 361 SLARIGDI--EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ AR GD+ EG+ +F E D N ++S G D+AE F ++IE G
Sbjct: 227 ACAR-GDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGI 285
Query: 419 KPNSTSWETLAE 430
P T++ + E
Sbjct: 286 VPEITTYSYIVE 297
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 153/320 (47%), Gaps = 13/320 (4%)
Query: 136 GERFRLSASDAA----IQLDLIAKVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYV-R 188
E FRL I ++++ K + A+DF S+ + V Y +++ Y R
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284
Query: 189 ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYS 248
R+ G A +++D M+++G S Y +++ K + +E ++ +MKE G+ +
Sbjct: 285 GRVEG-ARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVT 343
Query: 249 YNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
YN + ++G K G + M V +A+ P +T++ + G++++A+ ++ +
Sbjct: 344 YNTLIDGYCNKGDLVKAFGYRDEM-VRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402
Query: 309 ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIG 366
D + Y+ L++ Y G ++ + + + + + + P T + Y ++I L++
Sbjct: 403 GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQP--TLVTYTSLIYVLSKRN 460
Query: 367 DIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWE 426
++ + +FE+ + +S D + N ++ + GN D+A A + + P+ ++
Sbjct: 461 RMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYN 520
Query: 427 TLAEGHIRERRILEALSCLK 446
TL +G RE ++ EA LK
Sbjct: 521 TLMQGRCREGKVEEARELLK 540
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 10/283 (3%)
Query: 159 VASAEDFFLSLPDT-----LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
VA +D F L T K V+ L+ A + +A D M++KG
Sbjct: 144 VAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIET 203
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+N M++L++K+ + + V + +EM I+ VY++NI ++ +G +K + M+
Sbjct: 204 FNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSME 263
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ V PN T++T+ Y G+VE A L +++R D Y L+S GK
Sbjct: 264 -NLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKL 322
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--N 391
EE + + + T + Y+ +I GD+ +E V+ + P ++ N
Sbjct: 323 EEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEM--VRRAILPTVSTYN 380
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
L++ EG D+A+ + + G P+S ++ L G+ R
Sbjct: 381 LLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCR 423
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 116/258 (44%), Gaps = 9/258 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++A A+ +I M D G S+ YN+++ Y + + ++ EM
Sbjct: 378 TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KGI+ + +Y + + + + +FE + + + +P+ F+ + + G
Sbjct: 438 ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKI-IREGASPDLIMFNALIDGHCANGN 496
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGY 355
+++A L+ ++ R D V Y+ L+ GK EE + R + P ++ Y
Sbjct: 497 LDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRP--DHISY 554
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSI 413
+ +IS ++ GDI I +E LS+ ++P + N ++ K D AE +
Sbjct: 555 NTLISGYSKRGDINDAFTIRDEMLSI--GFNPTLLTYNALIQGLCKNQQGDLAEELLKEM 612
Query: 414 IEEGGKPNSTSWETLAEG 431
+ +G P+ +++ +L EG
Sbjct: 613 VSKGITPDDSTYFSLIEG 630
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 13/219 (5%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PDTLKDR 176
K A ++D M ++G + L + I + ++K + + +A+D F + PD +
Sbjct: 428 KKAFNLHDEMISKGIQPTLVTYTSLIYV--LSKRNRMKAADDLFEKIIREGASPDLI--- 482
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
++ AL++ + A L+ +M + + YN +M + + +E ++ E
Sbjct: 483 -MFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKE 541
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
MK +GIR D SYN +S +G + + M + NP T++ + K
Sbjct: 542 MKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM-LSIGFNPTLLTYNALIQGLCKNQ 600
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
Q + AEE L+ + S+ D Y L+ G V E
Sbjct: 601 QGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSE 639
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 4/167 (2%)
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
V ++ +P T T+ ++ V+ L R+ + + + L+ + +
Sbjct: 123 VSRSPSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRG 182
Query: 334 EEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
++ + +++ + V P + ++AM+S ++ E + ++ E +K N
Sbjct: 183 DDAFECFDMMKEKGVVPKIET--FNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFN 240
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+M++ KEG KA+ F S+ G KPN ++ T+ G+ R+
Sbjct: 241 IMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 134/330 (40%), Gaps = 5/330 (1%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V+K L + + A + D RG F+ S I K + A + F ++P
Sbjct: 166 VIKSLCQMNQIDKAFTMLDKAKVRG--FKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS 223
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D Y A+++ + R A + +M ++ A YN+++ K + D+
Sbjct: 224 --PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKAS 281
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
M+ EM ++G+ D ++N + G E+ + +M ++ P+ T++T+ +
Sbjct: 282 EMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM-AERNCRPSCCTYNTLISG 340
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
K V++A++ + S D V Y L G+ +E + +
Sbjct: 341 LCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPN 400
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y+ +I L + E ++ E +S D +++ KEG DKA
Sbjct: 401 LVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVE 460
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+++ G P+ ++ L EG R R+ EA
Sbjct: 461 GMLKRGCTPSVITYTALMEGLCRTGRVDEA 490
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 157/433 (36%), Gaps = 86/433 (19%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+ + K R K ALE+ FR S AI + I H + D L
Sbjct: 201 LTRAFCKTGRLKDALEI----------FRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLK 250
Query: 172 TLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
+ +R+V Y L++ +A A ++ +M D+G ++ +N +M K
Sbjct: 251 EMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAG 310
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK--------------------- 264
+++ S+++ M E+ R +YN +S Q + ++
Sbjct: 311 KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYS 370
Query: 265 -----------MEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
++ FEL+K K PN T++T+ K + EKA E L + S
Sbjct: 371 ILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS 430
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIE 369
D V Y ++ G+ ++ ++ L R P V + Y A++ L R G ++
Sbjct: 431 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSV--ITYTALMEGLCRTGRVD 488
Query: 370 GMEKIFEEWLSVKSSYDP--------------------------------RIANLMMSWY 397
IF+E +S + D + N +M Y
Sbjct: 489 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGY 548
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSW 457
KEG D+ F + G PN ++ + +G + ++ EA L+ +A
Sbjct: 549 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 608
Query: 458 RPKPVNVINFFKA 470
+ + FKA
Sbjct: 609 VSYNIIIDGLFKA 621
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKI----KEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
L+ +M KG + + YN ++ K K Y+ +ES+VS G DV +Y I +
Sbjct: 388 LVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS----GFVPDVVTYTIIV 443
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+G +K + E M + + P+ T++ + + G+V++A + + S+
Sbjct: 444 DGLCKEGRLDKALKMVEGM-LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 502
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
D + Y L++ Y + +E +V + R P + Y+A++ + G ++ +
Sbjct: 503 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT-PYIDV--YNALMDGYCKEGRLDEIPN 559
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
+FE+ + + N++M K G D+A F S+ G P+ S+ + +G
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 619
Query: 434 RERRILEA 441
+ + EA
Sbjct: 620 KASKPKEA 627
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 100/221 (45%), Gaps = 9/221 (4%)
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++G + ++ N +L + GS++++ +FE M +D P+ T+ + +M Q+
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERM-LDAGYAPDSYTYHLVIKSLCQMNQI 176
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+KA L + + R + Y L + G+ ++ + +R++ P + Y+A+
Sbjct: 177 DKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEI---FRNI-PSPDAIAYNAI 232
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I R D +G + +E K + D N+++ K DKA + +++ G
Sbjct: 233 IHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGV 292
Query: 419 KPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
P++ ++ ++ +G + + A S L A ++ RP
Sbjct: 293 TPDTVTFNSIMDGLCKAGKFERAHSLL----AVMAERNCRP 329
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 113/276 (40%), Gaps = 34/276 (12%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
+ ++M D GYA S Y++++ ++ + D+ +M+ + K +G + +V Y I +
Sbjct: 147 MFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFC 206
Query: 258 SQGSTEK----------------------------MEGVFELMKV--DKAVNPNWTTFST 287
G + +G E +K ++ V P+ T++
Sbjct: 207 KTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNI 266
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RS 345
+ K + +KA E L + R D V ++ ++ GK E + + + R+
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
P Y+ +IS L + +++ + + +E++S D +++ K G D+
Sbjct: 327 CRPSCCT--YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDE 384
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A + +G PN ++ TL +G + + +A
Sbjct: 385 AFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKA 420
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 118/284 (41%), Gaps = 12/284 (4%)
Query: 148 IQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
I +D + K V A F S+ + D Y +++ +A A ++D+M
Sbjct: 578 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 637
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G ++ YN +M + K + +D+ ++ M + G+ D +YN +S T ++
Sbjct: 638 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLIS---GLSQTNRL 694
Query: 266 EGVFELMKV---DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
+ELM + V TT++T+ K G +++A + + + V Y+
Sbjct: 695 GDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNI 754
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ G+ +E + + ++ V+ Y +I L + ++ K+ E ++VK
Sbjct: 755 FIDRLCKEGRLDEASSLLSEMDTLRDEVS---YTTVIIGLCKAEQLDRASKLAREMVAVK 811
Query: 383 S-SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
NL++ + K D+A +++ G P+ ++
Sbjct: 812 GLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITY 855
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 94/237 (39%), Gaps = 2/237 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY AL++ Y + + + M +G + YN++M K + DE + M
Sbjct: 540 VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM 599
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G DV SYNI + ++ V + M + + P+ T++T+ + K +
Sbjct: 600 HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM-IQAGIPPDAVTYNTLMAQFCKEER 658
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYH 356
+ A L+ + D V Y+ L+S + + Y + + + R+ Y+
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 718
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+I L + G ++ + + + N+ + KEG D+A + + +
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 20/188 (10%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K K AL + D M G + I +D + K G LS D
Sbjct: 720 IIDRLCKEGCLKQALLLMDHMTGHG--VEANTVTYNIFIDRLCK-EGRLDEASSLLSEMD 776
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRD-KGYAVHSLPYNVMMTLYMKIKEYDEV 230
TL+D Y ++ +A A L +M KG + S +N+++ + K K DE
Sbjct: 777 TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 836
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+++ M ++G V +YN+ ++ + +L KVDKA W F MA
Sbjct: 837 LTLLGLMVQRGCSPSVITYNMVITC------------LCKLDKVDKA----WELFDEMAV 880
Query: 291 MYIKMGQV 298
I V
Sbjct: 881 RGIVASSV 888
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ L++A+ + + A L+ M +G + + YN+++T K+ + D+ + EM
Sbjct: 819 TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
+GI SY + + QG ++ V E M
Sbjct: 879 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
>gi|302753488|ref|XP_002960168.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
gi|300171107|gb|EFJ37707.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
Length = 585
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 161/359 (44%), Gaps = 24/359 (6%)
Query: 84 DNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSA 143
D P +S +N G +K + ++++L K ++YK AL+ + F +
Sbjct: 66 DVPGHRVSSYINWLVDMGEIDSKPMVLSIIRKLTKRQKYKTALD---------KAFEIDD 116
Query: 144 SDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
D +Q+D A V + AE F LPD K Y +L +VR RM A +++DK+R
Sbjct: 117 RDYVLQVDYYAHV-DMYLAEMAFNRLPDDKKTEEAYNYILAGFVRNRMLEKAVVVMDKIR 175
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
+ G V + M L+ + + ++V E + G+ + N L G
Sbjct: 176 ELG-LVSAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIKRRHGDLS 234
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI-TGR---DRVP 319
ME + E +++ N W T+ +A+ YI+ G EKA +L E+ I GR R
Sbjct: 235 GMEEIVEELELMGRSNA-W-TYIFIASAYIQAGLPEKAHAALGAAEAGIRNGRFKKQRKV 292
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW- 378
Y+ +L LYG + E + RVW + S P V + MI +L G+I E+IFEE
Sbjct: 293 YNKILLLYGLLKDTEGIERVWGILNSR-PLVAVHNHLFMIEALGSAGNIGRAEEIFEELR 351
Query: 379 --LSVKSSYDPRIANLMMSWYVKEGNFDKA-EAFFNSIIEEGGKPNSTSWETLAEGHIR 434
V+ Y I +M Y K G DKA E ++ + +P + +G+I+
Sbjct: 352 KCRGVRKEYRQFI--VMAGAYTKNGLMDKATEVLYDYPAKYKARPVPELYHYFIKGYIK 408
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 21/228 (9%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN ++ LY +K+ + +E + + + + + V+++ + + GS G+ + E +FE ++
Sbjct: 293 YNKILLLYGLLKDTEGIERVWGILNSRPL-VAVHNHLFMIEALGSAGNIGRAEEIFEELR 351
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP--YHYLLSLYGSVG 331
+ V + F MA Y K G ++KA E L ++ R VP YHY + Y
Sbjct: 352 KCRGVRKEYRQFIVMAGAYTKNGLMDKATEVLYDYPAKYKARP-VPELYHYFIKGYIKRN 410
Query: 332 KKEEVYRVWN------LYRSVFPGVTNLGYHAMI---SSLARIGDIEGMEKIFEEWLSVK 382
+K+ + YRS T L Y M+ S A GD+ +F+ + K
Sbjct: 411 EKDWAIEAYEEGQSLVRYRS-----TKLWYETMLEVMSIYAERGDVTSALAMFKHCKACK 465
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
D R+ L+ YV + A ++ G +PN E + E
Sbjct: 466 HR-DIRMFTLLFKTYVVAK--EPAHGLIKRMVMLGFEPNDEIRELILE 510
>gi|297836834|ref|XP_002886299.1| hypothetical protein ARALYDRAFT_319921 [Arabidopsis lyrata subsp.
lyrata]
gi|297332139|gb|EFH62558.1| hypothetical protein ARALYDRAFT_319921 [Arabidopsis lyrata subsp.
lyrata]
Length = 424
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 142/334 (42%), Gaps = 64/334 (19%)
Query: 46 KLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLT 105
KLP C S +H T+ P + + + R++ + + + +L +W + G
Sbjct: 15 KLP---CRRSFVHFPKTIP---SPELIDDTLKRRIERVQDSTVSITPLLREWCQIGNQTA 68
Query: 106 KWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF 165
EL ++ L + R+ HAL+V DWM + + ++LS+ D +L L AKV GV A F
Sbjct: 69 LSELRSIITSLHRSNRFFHALQVSDWMIEQ-KAYKLSSMDFERRLYLTAKVCGVEEAAKF 127
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F ++P D V L+ +M +K L ++ ++T Y
Sbjct: 128 FETVPAEDHDMVVK------------------LLGEMDEKKMQPQGLSFDKLLTSY---- 165
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
SM S++ +G+ EK +E+M + WTTF
Sbjct: 166 ------SMASDLDVQGM--------------------EKFLSKWEVM-----IQEKWTTF 194
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDR-VPYHYLLSLYGSVGKKEEVYRVWNLYR 344
+Y++ G EK LRR E + R R + Y L++ Y S E+VYR+WNL +
Sbjct: 195 YFPGLVYLRAGFREKGLALLRRSEPSVGDRAREIIYGCLMTAYCSENLTEDVYRLWNLAK 254
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
+ ++ + + GD+ +++ EEW
Sbjct: 255 DYGISFDSSKCSDIVKAFMKKGDL---DEVMEEW 285
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 8/269 (2%)
Query: 178 VYGALLNAYVRARMRGN---AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
Y +L++ Y + GN ++L+ +M + G + ++ + V++ Y K +
Sbjct: 228 TYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVF 287
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EMK++GI V +YN +S S+G E+ + E M+ D ++PN TF + + K
Sbjct: 288 EEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME-DLGLSPNEITFGCVLKGFCK 346
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
G + A + + + R D V Y L+ Y +GK E+ V + + P VT
Sbjct: 347 KGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTT 406
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I+ +R GD + +E D N+++ +G KA +
Sbjct: 407 --YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDE 464
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ E G +PN ++ T+ +G + I A
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSA 493
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +Y L++ Y R +A + + M KG + + YN ++T + + ++ ++
Sbjct: 368 DVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EMKEKGI DV +YN+ + + +G K + + M + + PN T++T+ +
Sbjct: 428 DEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS-EVGLEPNHLTYNTIIQGFCD 486
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFP-GVT 351
G ++ A E R+E + V Y+ + + +GK +E + N L + + P G+T
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 109/269 (40%), Gaps = 41/269 (15%)
Query: 163 EDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
ED LS P+ + +G +L + + M +A ID M ++ + Y +++ Y
Sbjct: 326 EDLGLS-PNEI----TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYR 380
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
++ + ++ ++ M +KGI +V +YN ++ G G+ + MK +K + +
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK-EKGIEADV 439
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
T++ + G+V KA + LL VG +
Sbjct: 440 VTYNVLIGALCCKGEVRKAVK-------------------LLDEMSEVGLEP-------- 472
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+L Y+ +I G+I+ +I + + N+ + ++ + G
Sbjct: 473 --------NHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
D+A N ++++ PN ++ET+ EG
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEG 553
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 93/227 (40%), Gaps = 10/227 (4%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+N +++ +I + + + ++K G+ V +YN + +G M V L+K
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLK 253
Query: 274 --VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
V+ ++P TF + Y K A ++ + V Y+ L+S S G
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS--VKSSYDPRI 389
K EE ++ + + + ++ + +GM +W+ + + +P +
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCK----KGMMADANDWIDGMTERNVEPDV 369
Query: 390 A--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+++ Y + G + A A ++ ++G PN T++ L G R
Sbjct: 370 VIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
V+P+ TF+T+ + ++GQ+ KA + + +++ Y+ L+ Y G +Y
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 338 RVWNLYRS-VFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
V L + V G+ T + + +I+ + + ++FEE + N ++
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
S EG ++ + + G PN ++ + +G ++ + +A
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADA 353
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 132/268 (49%), Gaps = 10/268 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y AL+N Y + M +A +++ M + + ++ YN ++ Y K + + ++++M
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM-GVLNKM 453
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E+ + DV +YN + G+ + + LM D+ + P+ T+++M K +
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN-DRGLVPDQWTYTSMIDSLCKSKR 512
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
VE+A + +E + + V Y L+ Y GK +E + + L ++ P +L +
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP--NSLTF 570
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LMMSWYVKEGNFDKAEAFFNSI 413
+A+I L G ++ E E VK P ++ +++ +K+G+FD A + F +
Sbjct: 571 NALIHGLCADGKLK--EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
+ G KP++ ++ T + + RE R+L+A
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 142/325 (43%), Gaps = 15/325 (4%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGAL 182
A +V++ M +G R A I +A+ + A D F+ + D R Y L
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR--RIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
+ + + + A L+ +M + G + Y V++ ++++ ++ +M EKG+
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
+V +YN ++ +G E V ELM+ + ++PN T++ + Y K V KA
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELME-SRKLSPNTRTYNELIKGYCK-SNVHKAM 447
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMIS 360
L ++ R D V Y+ L+ G + YR+ +L R + P Y +MI
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD--QWTYTSMID 505
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
SL + +E +F+ + + + ++ Y K G D+A ++ + P
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 421 NSTSWETL-----AEGHIRERRILE 440
NS ++ L A+G ++E +LE
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLE 590
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 114/258 (44%), Gaps = 2/258 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ R Y L+ Y ++ + A +++KM ++ + YN ++ + +D ++
Sbjct: 427 NTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S M ++G+ D ++Y + S E+ +F+ ++ K VNPN ++ + Y K
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE-QKGVNPNVVMYTALIDGYCK 544
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+V++A L ++ S+ + + ++ L+ + GK +E + + T
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
+I L + GD + F++ LS + D + Y +EG AE +
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Query: 415 EEGGKPNSTSWETLAEGH 432
E G P+ ++ +L +G+
Sbjct: 665 ENGVSPDLFTYSSLIKGY 682
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 146/367 (39%), Gaps = 39/367 (10%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
S++ND G +W ++ L K +R + A +++D + +G + A I D
Sbjct: 486 SLMNDR---GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI--D 540
Query: 152 LIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
K V A + + L + + AL++ A LL +KM G
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+++ +K ++D S +M G + D ++Y ++ + +G E +
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL--- 326
M+ + V+P+ T+S++ Y +GQ A + L+R+ R TG + H LSL
Sbjct: 661 AKMR-ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM--RDTGCEP-SQHTFLSLIKH 716
Query: 327 -----YG-SVGKKEEVYRVWNLY--------------RSVFPGVTNLGYHAMISSLARIG 366
YG G + E+ + N+ SV P + Y +I + +G
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS--YEKLILGICEVG 774
Query: 367 DIEGMEKIFEEWLSVKSSYDPR--IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
++ EK+F+ + P + N ++S K ++A + +I G P S
Sbjct: 775 NLRVAEKVFDH-MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 425 WETLAEG 431
+ L G
Sbjct: 834 CKVLICG 840
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 50/88 (56%)
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +++SLAR G ++ M++++ E L K + N M++ Y K GN ++A + + I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEAL 442
E G P+ ++ +L G+ + + + A
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 102/237 (43%), Gaps = 17/237 (7%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN ++ + DE++ + EM E + ++Y+YN ++ G+ E+ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI- 244
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
V+ ++P++ T++++ Y + ++ A + + + R+ V Y +L+ +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 334 EEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK----SSYDP 387
+E ++ + FP V Y +I SL G E+ E VK + P
Sbjct: 305 DEAMDLFVKMKDDECFPTVRT--YTVLIKSLC------GSERKSEALNLVKEMEETGIKP 356
Query: 388 RIAN--LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
I +++ + F+KA ++E+G PN ++ L G+ + I +A+
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 141/366 (38%), Gaps = 61/366 (16%)
Query: 121 RYKHALEVYD-----WMNNR--GERFRL---------SASDAAIQLDLIAKVHGVASAED 164
RYKH++ Y +NN G F++ S DA LDL K++ E
Sbjct: 118 RYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMN---KDER 174
Query: 165 FFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
F L + Y LLN+ R + + + +M + + YN M+ Y K+
Sbjct: 175 FELKYKLIIG---CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKL 231
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYN---------------------IWLSSC--GSQGS 261
+E VS++ E G+ D ++Y + L C
Sbjct: 232 GNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY 291
Query: 262 TEKMEGVFELMKVDKAV--------NPNWTTFSTMATMYIKMGQVEKAEESLRRV-ESRI 312
T + G+ ++D+A+ + + T T + + E+ E+L V E
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE 351
Query: 313 TG--RDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDI 368
TG + Y L+ S K E+ + L + + P V + Y+A+I+ + G I
Sbjct: 352 TGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV--ITYNALINGYCKRGMI 409
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
E + E S K S + R N ++ Y K N KA N ++E P+ ++ +L
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 429 AEGHIR 434
+G R
Sbjct: 469 IDGQCR 474
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/276 (17%), Positives = 115/276 (41%), Gaps = 25/276 (9%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M G + Y + Y + + E M+++M+E G+ D+++Y+ + G G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM--GQVEKAEESL------------- 305
T V + M+ D P+ TF ++ ++M G+ + +E L
Sbjct: 687 QTNFAFDVLKRMR-DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 306 ----RRVESRITGRDRVPYHYLLSL--YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
+ VE +T + +L + G++ E+V+ + P + L ++A++
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP--SELVFNALL 803
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
S ++ K+ ++ + V +++ K+G ++ + F ++++ G
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYY 863
Query: 420 PNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
+ +W+ + +G + ++ ++EA L G K
Sbjct: 864 EDELAWKIIIDG-VGKQGLVEAFYELFNVMEKNGCK 898
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 116/281 (41%), Gaps = 24/281 (8%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
T D Y + Y R +AE ++ KMR+ G + Y+ ++ Y + + +
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 232 SMVSEMKEKGIRLDVYSY-----NIWLSSCGSQGSTE----------KMEGVFELMK--V 274
++ M++ G +++ ++ G Q +E + + V EL++ V
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 275 DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR--ITGRDRVPYHYLLSLYGSVGK 332
+ +V PN ++ + ++G + AE+ ++ I+ + V ++ LLS + K
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV-FNALLSCCCKLKK 811
Query: 333 KEEVYRVWNLYRSV--FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
E +V + V P + + +I L + G+ E +F+ L D
Sbjct: 812 HNEAAKVVDDMICVGHLPQLESC--KVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+++ K+G + FN + + G K +S ++ L EG
Sbjct: 870 KIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 126/273 (46%), Gaps = 5/273 (1%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ + D ALL A ++RM A + D+M G A+++ YN M+ + +K +
Sbjct: 232 EVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALA 291
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
ES+++ M G+ LD +S+N ++ +G + V E M+ ++ V + T++++
Sbjct: 292 ESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERME-NQGVKADVVTWNSLIH 350
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFP 348
K +V++A + LR + D V Y L+ Y G EE ++ + + P
Sbjct: 351 GLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLP 410
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
GV Y+A++ L G ++ + + E K D N +++ Y K G+ A
Sbjct: 411 GVAT--YNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALK 468
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++E G + + +++ L G + + + EA
Sbjct: 469 VKRRMMESGLQLDQFTYKALVHGFCKAKELDEA 501
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 123/264 (46%), Gaps = 3/264 (1%)
Query: 179 YGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A + Y R + G AE+L M +G A + + Y +++ + I + +E + + EM
Sbjct: 263 YNAFIEGYFKRLDLGGVAEILT-LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 321
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+EKGI DVY Y +S G+ ++ +F+ M DK + P+ T+ + K GQ
Sbjct: 322 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM-TDKGLIPSAHTYGALIHGVCKAGQ 380
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+E A+ + ++ + + V ++ L+ Y G +E R+ + Y++
Sbjct: 381 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS 440
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+ S L ++ + + + + S + ++ Y KEGNF +A+ F + E+G
Sbjct: 441 IASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG 500
Query: 418 GKPNSTSWETLAEGHIRERRILEA 441
PN ++ L +G+ + + EA
Sbjct: 501 NVPNIITYNVLIDGYSKRGNMKEA 524
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 163/368 (44%), Gaps = 18/368 (4%)
Query: 70 MIKWNAI----FRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHA 125
++ +NA F++L L G A +L EK G + ++ + + A
Sbjct: 260 VVTYNAFIEGYFKRLDLG-----GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEA 314
Query: 126 LEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALL 183
+++ M +G + + I + + V A F + D + YGAL+
Sbjct: 315 QRLFEEMREKGIEADVYVYTSIISCN--CRSGNVKRALVLFDEMTDKGLIPSAHTYGALI 372
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR 243
+ +A A++L+++M+ KG ++ + +N ++ Y + DE + M++KG+
Sbjct: 373 HGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLE 432
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
DV++YN S ++ +G+ M V++ V+PN +F+T+ +Y K G +A+
Sbjct: 433 SDVFAYNSIASGLCKLNRKDEAKGLLFSM-VERGVSPNTMSFTTLIDIYCKEGNFVEAKR 491
Query: 304 SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISS 361
R +E + + + Y+ L+ Y G +E +++ + R + P V ++I
Sbjct: 492 VFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTC--TSLIHG 549
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
G ++ K+F+E + M+S K+G ++A ++ + E G P+
Sbjct: 550 ECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPD 609
Query: 422 STSWETLA 429
T + +L
Sbjct: 610 DTVYSSLV 617
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 5/269 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L++A+V+A A + M G + +NV+M + K K D V + EM+
Sbjct: 92 YNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQ 151
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ +V +Y+I + + G EK VF MK + PN T+++M K G V
Sbjct: 152 NQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMK-SRGCRPNIFTYTSMIDGLGKSGHV 210
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
+KA + S RV Y+ L+ G G+ + +++ L + + P ++ +
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQP--DHVTFT 268
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+++ L G +IF+E V + D + N+++ K D+A F + E+
Sbjct: 269 SLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEED 328
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCL 445
G P+ ++ L +G + RI +A L
Sbjct: 329 GLVPDVYTFNALMDGLCKSGRIHDAFILL 357
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 5/272 (1%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PDT + L+NA+ +A+ + L ++M+++ + + + Y++++ K ++
Sbjct: 122 PDTY----TFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEK 177
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ +MK +G R ++++Y + G G +K +FE M + V ++++
Sbjct: 178 ALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLV-ATRVVYNSLI 236
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+ G+ + A + R + S+ D V + L+ G G+ E R++ R V
Sbjct: 237 HGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCA 296
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y+ +I +L + ++ +IF E D N +M K G A
Sbjct: 297 LDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFIL 356
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ G P+ T + TL +G + R+ EA
Sbjct: 357 LGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEA 388
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 121/264 (45%), Gaps = 13/264 (4%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ DR Y +LL+ M A+ L+ +M KG + YN + K + D
Sbjct: 281 VPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARR 340
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
++ EM + + V +Y+ + C E ++E MK+ ++++ + +++TM +Y
Sbjct: 341 VLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKL-RSISVDRVSYNTMVGIY 399
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV------WNLYRSV 346
K+G+ ++A + +ES RD V Y+ LLS YG G +EV R+ WN+Y +
Sbjct: 400 AKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNT 459
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
L Y MI + G + +++++ + D ++ K G + +
Sbjct: 460 ------LTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESS 513
Query: 407 EAFFNSIIEEGGKPNSTSWETLAE 430
++IE+G KPN ++ ++ +
Sbjct: 514 IMLLIAMIEKGIKPNVVTFNSIID 537
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 139/357 (38%), Gaps = 49/357 (13%)
Query: 97 WEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKV 156
W++ GR + ++ L + HAL +++ G + + A I +
Sbjct: 169 WKQNGRIAKGKLVSTMIGTLGRLGEINHALRLFESARLEGHGNTVYSFSAMISA--YGRN 226
Query: 157 HGVASAEDFFLSLPDTLKDRRVYGALL--NAYVRARMRGNAEL-----LIDKMRDKGYAV 209
+ A D F S+ + VY L+ N+ + A +G + D+M +G
Sbjct: 227 GHFSDAVDLFRSM----RSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVP 282
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
L YN ++++ ++ + ++SEM +KGI D ++YN +L + G + V
Sbjct: 283 DRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVL 342
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
E M + V P T+STM K +E A ++ R DRV Y+ ++ +Y
Sbjct: 343 EEMS-SRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAK 401
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+G+ +E IG + ME S D
Sbjct: 402 LGRFDEA----------------------------IGQCKEME-------SCGMKRDVVT 426
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
N ++S Y + G +D+ F + PN+ ++ T+ + + + EA+ K
Sbjct: 427 YNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYK 483
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 9/295 (3%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y A++ + M A LI + KG + YN+++ ++ ++DE E
Sbjct: 249 LPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEK 308
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+V+EM +G + +Y+I +SS G ++ V ++M ++K + P+ ++ + +
Sbjct: 309 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVM-IEKELTPDTYSYDPLISAL 367
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF--PGV 350
K G+++ A + + S D V Y+ +L+ G + ++N R + P V
Sbjct: 368 CKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNV 427
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
++ Y+ MIS+L GD + +S D N ++S ++G ++A
Sbjct: 428 SS--YNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLL 485
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVI 465
+ + + G +P S+ + G + RRI +A+ G FA K RP I
Sbjct: 486 DDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI----GMFAEMIEKGCRPNETTYI 536
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 154/354 (43%), Gaps = 28/354 (7%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
T D Y A+++ + + A ++++M+ +G+ + YN+M+ ++
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+++ ++ V +Y I + + +G + + E M + + + P+ T++ +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM-LARGLLPDMYTYNAIIRG 261
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
K G VE+A E + + S+ D + Y+ LL + + GK +E ++ S
Sbjct: 262 MCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPN 321
Query: 352 NLGYHAMISSLARIGDIEG----MEKIFEEWLSVKS-SYDPRIANLMMSWYVKEGNFDKA 406
+ Y +ISSL R G I+ ++ + E+ L+ + SYDP I+ L KEG D A
Sbjct: 322 KVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL-----CKEGRLDLA 376
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRE---RRILEALSCLKGAFAAEGAKSWRPKPVN 463
+ +I G P+ ++ T+ + + LE + L+G S+
Sbjct: 377 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN----T 432
Query: 464 VINFFKACEEES-DMGSKEAFVALLRQPGYRKEKDYMSLI------GLTDEAVA 510
+I+ +C + S +G A ++ P E Y SLI GL +EA+
Sbjct: 433 MISALWSCGDRSRALGMVPAMISKGIDP---DEITYNSLISCLCRDGLVEEAIG 483
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 106/267 (39%), Gaps = 6/267 (2%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LLN +A + ++ + +KGY + ++ + K ++ S V E+ E
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILESH 142
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
DV++YN +S E V MK + P+ T++ M ++ A
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKA-RGFLPDIVTYNIMIGSLCNRRKLGLA 201
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMI 359
L ++ + Y L+ G E ++ L R + P + Y+A+I
Sbjct: 202 LTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYT--YNAII 259
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ + G +E ++ S D N+++ ++ +G +D+ E + G +
Sbjct: 260 RGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 319
Query: 420 PNSTSWETLAEGHIRERRILEALSCLK 446
PN ++ L R RI EA+S LK
Sbjct: 320 PNKVTYSILISSLCRFGRIDEAISVLK 346
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L++ R + A L+D M G+ + YN+++ K++ D+ M
Sbjct: 461 DEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMF 520
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQG-STEKME 266
+EM EKG R + +Y + + G G TE ME
Sbjct: 521 AEMIEKGCRPNETTYILLIEGIGFAGWRTEAME 553
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 188/427 (44%), Gaps = 25/427 (5%)
Query: 31 FTRLHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAI---FRKLSLMDN-- 85
F RL Q K + I S+ + + Y TV R M ++N I LS++ N
Sbjct: 59 FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQM-EFNGITSDLVILSILINCF 117
Query: 86 PQLG----SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRL 141
QLG S SVL K G L ++K L + AL+ +D + G F L
Sbjct: 118 SQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALG--FHL 175
Query: 142 SASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYVRARMRGNAELLI 199
+ ++ + KV ++A + L V Y ++++ + ++ A L
Sbjct: 176 NKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 235
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
+M KG + + YN +++ + + + + + ++M + I +VY++NI + +
Sbjct: 236 SEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKE 295
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
++ + V +M + + + P+ T++++ Y + +V KA+ + R G +
Sbjct: 296 RRLKEAKNVLAMM-MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQR--GVNPNI 352
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYR-----SVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
+ Y + ++G K ++V NL++ ++ P V Y+++I L ++G I K+
Sbjct: 353 HSYSIMIHG-FCKIKKVDEAMNLFKEMHCNNIIPDVVT--YNSLIDGLCKLGKISYALKL 409
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+E +D N ++ K DKA A + +EG +P+ ++ TL +G +
Sbjct: 410 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469
Query: 435 ERRILEA 441
R+ +A
Sbjct: 470 NGRLEDA 476
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/324 (18%), Positives = 142/324 (43%), Gaps = 15/324 (4%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSL 169
++ + K + A ++Y M ++G + +A I I V + A D F +
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCI--VGKMKDATDLFNKMIF 275
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ + + L++ + + R A+ ++ M +G YN +M Y +KE ++
Sbjct: 276 ENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNK 335
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ + + + ++G+ +++SY+I + ++ +F+ M + + P+ T++++
Sbjct: 336 AKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNII-PDVVTYNSLI 394
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----R 344
K+G++ A + + + R D++ Y+ S+ ++ K +V + L
Sbjct: 395 DGLCKLGKISYALKLVDEMHDRGVPHDKITYN---SILDALCKNHQVDKAIALLTKMKDE 451
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ P + Y ++ L + G +E +FE+ L D I M+ + G FD
Sbjct: 452 GIQPDICT--YTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFD 509
Query: 405 KAEAFFNSIIEEGGKPNSTSWETL 428
++ + + E G PN+ ++E +
Sbjct: 510 ESLDLLSKMEENGCIPNAVTYEII 533
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 9/240 (3%)
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
+K Y V S+ +M+ GI D+ +I ++ C SQ + + PN
Sbjct: 83 VKSNHYSTVVSLHRQMEFNGITSDLVILSILIN-CFSQLGQNPLSFSVLAKILKMGYEPN 141
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
T +T+ GQ+ +A + +V + ++V Y L++ VG+ ++
Sbjct: 142 VITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLR 201
Query: 342 LY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+ V P V + Y+ +I S+ ++ + ++ E +S S D N ++S +
Sbjct: 202 RVDGKLVQPNV--VMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCI 259
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
G A FN +I E PN ++ L +G +ERR+ EA K A + +P
Sbjct: 260 VGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEA----KNVLAMMMKQGIKP 315
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-VD-KAVNPNWTTFSTMATMYIKMGQV 298
G L+ SY ++ G T +L++ VD K V PN ++T+ K+ V
Sbjct: 172 GFHLNKVSYGTLINGLCKVGQTS---AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 228
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
+A + + S+ D V Y+ L+S + VGK ++ ++N ++ ++ P V ++
Sbjct: 229 NEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYT--FN 286
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ + ++ + + + D N +M Y +KA+ FN+I +
Sbjct: 287 ILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQR 346
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLK 446
G PN S+ + G + +++ EA++ K
Sbjct: 347 GVNPNIHSYSIMIHGFCKIKKVDEAMNLFK 376
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 97/216 (44%), Gaps = 11/216 (5%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSL 169
+VKE+ K A +++ ++ RG + + +I + K+ V A + F +
Sbjct: 329 LVKEVNK------AKHIFNTISQRGVNPNIHS--YSIMIHGFCKIKKVDEAMNLFKEMHC 380
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ + D Y +L++ + A L+D+M D+G + YN ++ K + D+
Sbjct: 381 NNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDK 440
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+++++MK++GI+ D+ +Y + G E VFE + V K + ++ M
Sbjct: 441 AIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLV-KGYILDVNIYTAMI 499
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+ G +++ + L ++E + V Y ++
Sbjct: 500 QGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIIC 535
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K + +AL++ D M++RG ++ LD + K H V A + D
Sbjct: 393 LIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI--LDALCKNHQVDKAIALLTKMKD 450
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D Y L++ + +A ++ + + KGY + Y M+ + +DE
Sbjct: 451 EGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDE 510
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
++S+M+E G + +Y I + S + +K E + M
Sbjct: 511 SLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 154/337 (45%), Gaps = 22/337 (6%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHG-VASAEDFFLSLP 170
++ L + R++ A+ V+ M G A + +++ V+ +A L+L
Sbjct: 182 LISALSRASRFRDAVAVFRRMVANG------VCPALVTYNVVLHVYSKIAVPWKEVLALV 235
Query: 171 DTLK------DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
D+++ DR Y L++ R + A + D+MR G+ + N ++ +Y K
Sbjct: 236 DSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKA 295
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
+ YDE ++ EM++ G V +YN +SS G E+ + E M+V K + P+ T
Sbjct: 296 RRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEV-KGIEPDVIT 354
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
++T+ + + G+++ A + + + Y+ L+ L+G GK E+ V++ R
Sbjct: 355 YTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIR 414
Query: 345 SV--FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKE 400
S P V ++ +++ + G + +F+E KS Y P ++S Y +
Sbjct: 415 SAGFVPDVVT--WNTLLAVFGQNGLDTEVSGVFKEM--KKSGYVPERDTYVSLISSYSRC 470
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
G FD+A + +IE G P+ +++ + R R
Sbjct: 471 GLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGR 507
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 12/264 (4%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYD 228
PD D Y AL++A RA +A + +M G + YNV++ +Y KI +
Sbjct: 172 PD--PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWK 229
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
EV ++V M++ GI LD Y+YN +S C + ++ VF+ M+ P+ T +++
Sbjct: 230 EVLALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRA-AGFEPDKVTLNSL 288
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSV 346
+Y K + ++A L+ +E V Y+ L+S Y G EE ++ + +
Sbjct: 289 LDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGI 348
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFD 404
P V + Y ++S L R G I+ + E L ++ P + N ++ + G F
Sbjct: 349 EPDV--ITYTTLVSGLDRAGKIDAAIGTYNEML--RNGCKPNLCTYNALIKLHGVRGKFP 404
Query: 405 KAEAFFNSIIEEGGKPNSTSWETL 428
+ F+ I G P+ +W TL
Sbjct: 405 EMMIVFDEIRSAGFVPDVVTWNTL 428
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 159/404 (39%), Gaps = 49/404 (12%)
Query: 44 RQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGS--ASVLNDWEKGG 101
R K P + +I S G V ++ WN + L++ L + + V + +K G
Sbjct: 400 RGKFPEMMIVFDEIRSAGFVP----DVVTWNTL---LAVFGQNGLDTEVSGVFKEMKKSG 452
Query: 102 RSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS 161
+ ++ + + A+E+Y M G +S +A L +A+
Sbjct: 453 YVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAV--LSALARGGRWEQ 510
Query: 162 AEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AE F + D+ D Y +LL+AY A+ + L + + + H+ ++
Sbjct: 511 AEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVL 570
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
+ K+ + E E++ + LD+ N +S G G +K+E + LMK + ++N
Sbjct: 571 VNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMK-ESSIN 629
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
+ T++++ MY ++G EK E L ++S DR Y+ ++ YG G+ +E R
Sbjct: 630 LSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASR- 688
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+F E D N+ + YV
Sbjct: 689 ----------------------------------LFSEMKCSGLVPDIVTYNIFVKSYVA 714
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
F++A ++ G KPN ++ T+ + + RI + S
Sbjct: 715 NSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKS 758
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 145/369 (39%), Gaps = 36/369 (9%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
++ +N + S + P ++++ K G L ++ ++ R+ YK A +V+
Sbjct: 211 LVTYNVVLHVYSKIAVPWKEVLALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVF 270
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRA 189
D M G D+ +LL+ Y +A
Sbjct: 271 DEMRAAGFE-----------------------------------PDKVTLNSLLDVYGKA 295
Query: 190 RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSY 249
R A ++ +M G + YN +++ Y+K +E + EM+ KGI DV +Y
Sbjct: 296 RRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITY 355
Query: 250 NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
+S G + G + M + PN T++ + ++ G+ + +
Sbjct: 356 TTLVSGLDRAGKIDAAIGTYNEM-LRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIR 414
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
S D V ++ LL+++G G EV V+ + Y ++ISS +R G +
Sbjct: 415 SAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFD 474
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
+I++ + D N ++S + G +++AE F + +P+ S+ +L
Sbjct: 475 QAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLL 534
Query: 430 EGHIRERRI 438
+ +++
Sbjct: 535 HAYANAKKL 543
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 124/274 (45%), Gaps = 1/274 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ +R Y +L+++Y R + A + +M + G YN +++ + +++ E
Sbjct: 454 VPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEK 513
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ +EM+ R D SY+ L + + +KM+ + E + ++ + N T+ +
Sbjct: 514 LFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLV-KTLVLVN 572
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K+ + E++ + R D + ++S+YG G ++V + +L + ++
Sbjct: 573 SKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLST 632
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y++++ +R+GD E E I E S ++ D N M+ Y ++G +A F+
Sbjct: 633 ATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSE 692
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ G P+ ++ + ++ EA+ ++
Sbjct: 693 MKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVR 726
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 154 AKVHGVASAEDFFLSLPDTLKDRR------VYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+KV+ ++ E FL L + RR V A+++ Y + M E ++ M++
Sbjct: 573 SKVNNLSDTEKAFLEL----RRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSI 628
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ + YN +M +Y ++ + ++ E++++E+K R D YSYN + + G +G ++
Sbjct: 629 NLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASR 688
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+F MK V P+ T++ Y+ E+A + +R + + + Y+ +L Y
Sbjct: 689 LFSEMKCSGLV-PDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEY 747
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
S G+ + + + PG++ ++ LA+
Sbjct: 748 CSHGRIADGKSFISNLPELHPGISKREQQRLLELLAK 784
>gi|224031359|gb|ACN34755.1| unknown [Zea mays]
Length = 504
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 115/256 (44%), Gaps = 9/256 (3%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y A+L+ Y + M+ L D+ R G+ + + V+ ++ + +YD ++
Sbjct: 42 VLPDEVTYSAVLDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQ 101
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EM+E GI+ +++ YN L + G G +FE M +D+ V PN T + +A +
Sbjct: 102 FVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEM-IDQGVEPNARTLTALAKI 160
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV----F 347
Y + A + ++ D + + LLS+ VG E +++N +
Sbjct: 161 YGRARWGRDALQLWDKMRELKLPADSILCNTLLSMCADVGLVAEAEQLFNEMKDPECRDV 220
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LMMSWYVKEGNFDK 405
P Y AMI+ GD + ++F E L K +P I + +++ K +
Sbjct: 221 PKPDKWSYTAMINIYGSNGDTDSALQLFAEML--KGGIEPNIMSYTIVIQCLGKARRIQQ 278
Query: 406 AEAFFNSIIEEGGKPN 421
A S +E+G KP+
Sbjct: 279 AVEVLESGLEKGLKPD 294
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV-ESRITGRDRVPYHYLLSLYGSVGK 332
+D V + T+ST+ T + Q KA E R+ + D V Y +L +Y +G
Sbjct: 2 LDAGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGM 61
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
KEEV +++ R ++ + + GD +G++ +F+E V + + N
Sbjct: 62 KEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNA 121
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ K G A F +I++G +PN+ + LA+ + R R +AL
Sbjct: 122 LLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDAL 171
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 150/325 (46%), Gaps = 17/325 (5%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKV----HGVASAEDF--FLSLPDTLKDRRV 178
AL++Y M +RG + L + I L A+ H +A + F +PD + +
Sbjct: 280 ALKIYKEMRHRGIKPDLVSFSCLI--GLFARRGKMDHAMAYLREMRCFGLVPDGV----I 333
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++ + RA + +A + D+M G + YN ++ K + + E +++EM+
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 393
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E+G+ D+ ++ + +G +K +F+ M +++ + P+ T++T+ + G +
Sbjct: 394 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM-LNQRLRPDIVTYNTLIDGMCRQGDL 452
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
+KA + + SR + V Y L+ + G+ E+ + + + + + P + + Y+
Sbjct: 453 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI--MTYN 510
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++I R G++ +K ++ + K S D N ++ Y+KE A N + +E
Sbjct: 511 SIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 570
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
+P+ ++ L G + EA
Sbjct: 571 KVQPDVVTYNMLINGFSVHGNVQEA 595
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 112/235 (47%), Gaps = 5/235 (2%)
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
V++ N+M+ Y K E+D+V++++SEM+++ + DV ++N+ + + G E +
Sbjct: 154 VNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 213
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
+ M V K + P T++++ + G +KA E + ++ D + L+ +
Sbjct: 214 VDSM-VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272
Query: 329 SVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
VG+ EE +++ +R + P + + + +I AR G ++ E D
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVS--FSCLIGLFARRGKMDHAMAYLREMRCFGLVPD 330
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
I +++ + + G A + ++ G P+ ++ TL G +ERR+L+A
Sbjct: 331 GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 385
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 9/258 (3%)
Query: 184 NAYVRARMR-GNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
N V AR R G+AE L+D M KG + YN ++ + +D+ + EM +
Sbjct: 195 NVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD 254
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
G+ DV S+ I + G E+ +++ M+ + + P+ +FS + ++ + G+++
Sbjct: 255 FGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMR-HRGIKPDLVSFSCLIGLFARRGKMD 313
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
A LR + D V Y ++ + G + RV + + P V Y+
Sbjct: 314 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT--YNT 371
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+++ L + + E + E D ++ Y EG DKA F++++ +
Sbjct: 372 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 431
Query: 418 GKPNSTSWETLAEGHIRE 435
+P+ ++ TL +G R+
Sbjct: 432 LRPDIVTYNTLIDGMCRQ 449
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 119/290 (41%), Gaps = 42/290 (14%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
LPD + Y LLN + R +AE L+++MR++G + ++ Y +
Sbjct: 362 CLPDVV----TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 417
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-------------- 273
D+ + M + +R D+ +YN + QG +K +++ M
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 477
Query: 274 --------------------VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
++K + PN T++++ Y + G V K ++ L+++
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGM 371
D + Y+ L+ Y K + +++ N+ V P V Y+ +I+ + G+++
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVT--YNMLINGFSVHGNVQEA 595
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
IFE+ + D M++ +V GN +A + +++ G P+
Sbjct: 596 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/293 (18%), Positives = 125/293 (42%), Gaps = 38/293 (12%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ++L R+ M A + +M D G A + +++ + ++ E +E + EM
Sbjct: 228 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 287
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKM--------------EGVFELMKV--------- 274
+ +GI+ D+ S++ + +G + +GV M +
Sbjct: 288 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLM 347
Query: 275 -------DKAVN----PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
D+ V P+ T++T+ K ++ AE L + R D + L
Sbjct: 348 SDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTL 407
Query: 324 LSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+ Y GK ++ ++++ L + + P + Y+ +I + R GD++ ++++ S
Sbjct: 408 IHGYCIEGKLDKALQLFDTMLNQRLRPDIVT--YNTLIDGMCRQGDLDKANDLWDDMHSR 465
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+ + ++++ + ++G + A F + +I +G PN ++ ++ +G+ R
Sbjct: 466 EIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCR 518
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 150/325 (46%), Gaps = 17/325 (5%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKV----HGVASAEDF--FLSLPDTLKDRRV 178
AL++Y M +RG + L + I L A+ H +A + F +PD + +
Sbjct: 219 ALKIYKEMRHRGIKPDLVSFSCLI--GLFARRGKMDHAMAYLREMRCFGLVPDGV----I 272
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++ + RA + +A + D+M G + YN ++ K + + E +++EM+
Sbjct: 273 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 332
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E+G+ D+ ++ + +G +K +F+ M +++ + P+ T++T+ + G +
Sbjct: 333 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM-LNQRLRPDIVTYNTLIDGMCRQGDL 391
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
+KA + + SR + V Y L+ + G+ E+ + + + + + P + + Y+
Sbjct: 392 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI--MTYN 449
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++I R G++ +K ++ + K S D N ++ Y+KE A N + +E
Sbjct: 450 SIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 509
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
+P+ ++ L G + EA
Sbjct: 510 KVQPDVVTYNMLINGFSVHGNVQEA 534
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 112/235 (47%), Gaps = 5/235 (2%)
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
V++ N+M+ Y K E+D+V++++SEM+++ + DV ++N+ + + G E +
Sbjct: 93 VNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 152
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
+ M V K + P T++++ + G +KA E + ++ D + L+ +
Sbjct: 153 VDSM-VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211
Query: 329 SVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
VG+ EE +++ +R + P + + + +I AR G ++ E D
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVS--FSCLIGLFARRGKMDHAMAYLREMRCFGLVPD 269
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
I +++ + + G A + ++ G P+ ++ TL G +ERR+L+A
Sbjct: 270 GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 324
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 9/258 (3%)
Query: 184 NAYVRARMR-GNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
N V AR R G+AE L+D M KG + YN ++ + +D+ + EM +
Sbjct: 134 NVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD 193
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
G+ DV S+ I + G E+ +++ M+ + + P+ +FS + ++ + G+++
Sbjct: 194 FGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMR-HRGIKPDLVSFSCLIGLFARRGKMD 252
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
A LR + D V Y ++ + G + RV + + P V Y+
Sbjct: 253 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT--YNT 310
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+++ L + + E + E D ++ Y EG DKA F++++ +
Sbjct: 311 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 370
Query: 418 GKPNSTSWETLAEGHIRE 435
+P+ ++ TL +G R+
Sbjct: 371 LRPDIVTYNTLIDGMCRQ 388
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 118/265 (44%), Gaps = 7/265 (2%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y LLN + R +AE L+++MR++G + ++ Y + D+
Sbjct: 301 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 360
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ M + +R D+ +YN + QG +K +++ M + + PN T+S +
Sbjct: 361 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH-SREIFPNHVTYSILIDS 419
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFP 348
+ + GQVE A L + ++ + + Y+ ++ Y G+V K ++ + + V P
Sbjct: 420 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM-MVNKVSP 478
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ + Y+ +I + + K+ K D N++++ + GN +A
Sbjct: 479 DL--ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 536
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHI 433
F + +G +P+ ++ ++ GH+
Sbjct: 537 IFEKMCAKGIEPDRYTYMSMINGHV 561
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/297 (17%), Positives = 126/297 (42%), Gaps = 38/297 (12%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ++L R+ M A + +M D G A + +++ + ++ E +E + EM
Sbjct: 167 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 226
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKM--------------EGVFELMKV--------- 274
+ +GI+ D+ S++ + +G + +GV M +
Sbjct: 227 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLM 286
Query: 275 -------DKAVN----PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
D+ V P+ T++T+ K ++ AE L + R D + L
Sbjct: 287 SDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTL 346
Query: 324 LSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+ Y GK ++ ++++ L + + P + Y+ +I + R GD++ ++++ S
Sbjct: 347 IHGYCIEGKLDKALQLFDTMLNQRLRPDIVT--YNTLIDGMCRQGDLDKANDLWDDMHSR 404
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+ + ++++ + ++G + A F + +I +G PN ++ ++ +G+ R +
Sbjct: 405 EIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 461
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 119/263 (45%), Gaps = 1/263 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +LL+ YVR + + L++ M + G Y +++ + +VE++V EMK
Sbjct: 170 YNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMK 229
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
K + DVY Y +++ G+ + VF+ V + PN T+ + + K+GQ+
Sbjct: 230 AKNVAGDVYLYTAVINAYCRAGNVRRASEVFDEC-VGNGIEPNERTYGVLINGFCKIGQM 288
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
E AE L ++ R G +++ ++ ++ Y G + +V + + Y+ +
Sbjct: 289 EAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTL 348
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
L R+ + + + + + ++S + KEG+ +A F + +G
Sbjct: 349 ACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGA 408
Query: 419 KPNSTSWETLAEGHIRERRILEA 441
P+ ++ + +G+I++ I EA
Sbjct: 409 MPSVVTYNVMMDGYIKKGSIREA 431
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 121/257 (47%), Gaps = 7/257 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ R YG L+N + + AE+L+ M+ +G + + +N M+ Y + D +
Sbjct: 271 NERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVK 330
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M++ GI LDVY+YN + + + +M ++K V PN+ T++T+ +++ K
Sbjct: 331 AAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIM-IEKGVPPNYVTYTTLISIHCK 389
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVT 351
G + +A R + + V Y+ ++ Y GS+ ++ E +R + + P V
Sbjct: 390 EGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSI-REAERFRKEMEKKGLVPDVY 448
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y +++ G ++ K+FEE + + ++S KEG ++A ++
Sbjct: 449 T--YASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYD 506
Query: 412 SIIEEGGKPNSTSWETL 428
+++ G P+ + + L
Sbjct: 507 DMLKAGLTPDDSLYSAL 523
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 104/240 (43%), Gaps = 5/240 (2%)
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+V L +V++ + K D+ +++ EM G+RL+ YN L + +++
Sbjct: 129 SVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQE 188
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ E+M+ + + T++ + G + K E + ++++ D Y +++ Y
Sbjct: 189 LLEIME-NGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAY 247
Query: 328 GSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G V++ V G+ Y +I+ +IG +E E + + +
Sbjct: 248 CRAGNVRRASEVFD--ECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGH 305
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ I N M+ Y ++G D A ++ + G + + ++ TLA G R R+ EA + L
Sbjct: 306 NQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLL 365
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 9/267 (3%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D + D YG ++N Y + +A + ++MRD G V+ YN M+ K+ +EV
Sbjct: 319 DIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL--MKVDKAVNPNWTTFSTM 288
+ ++ EM++ G+R D YSYN + +GS K FE+ M V + T++T+
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRK---AFEMCRMMVRNGLAATTLTYNTL 435
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW--NLYRSV 346
+ + ++ A + R + + LL GK E+ +W L R +
Sbjct: 436 LKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGL 495
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
V + ++ +I+ L +IG + E++ + ++ D + Y K G A
Sbjct: 496 AKNV--ITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHI 433
N + G P+ + + GH
Sbjct: 554 THLMNKMEHLGFAPSVEMFNSFITGHF 580
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 132/321 (41%), Gaps = 41/321 (12%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
AL V+D M G R L R LLN
Sbjct: 167 ALNVFDGMGKVGCRPSL-----------------------------------RSCNRLLN 191
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
V++ G A ++ +MR G +M Y + + V EM+ G+ +
Sbjct: 192 KLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEV 251
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
++ +Y+ + G TE + E ++ K ++PN T++ + Y K G++E+AE
Sbjct: 252 NLVAYHAVMDCYCGMGWTEDARRILESLQ-RKGLSPNVVTYTLLVKGYCKDGRMEEAERV 310
Query: 305 LRRVESRITGR---DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
++ E + TG D V Y +++ Y G+ ++ RV N R V Y+ MI+
Sbjct: 311 VK--EMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L ++G +E ++K+ +E V D N ++ Y +EG+ KA ++ G
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428
Query: 422 STSWETLAEGHIRERRILEAL 442
+ ++ TL +G I +AL
Sbjct: 429 TLTYNTLLKGFCSLHAIDDAL 449
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 141/340 (41%), Gaps = 52/340 (15%)
Query: 153 IAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+ K+ +A AE+ + PD+L Y L + Y + G A L++KM G
Sbjct: 509 LCKIGRMAEAEELLDRMKELRCPPDSL----TYRTLFDGYCKLGQLGTATHLMNKMEHLG 564
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST-EKM 265
+A +N +T + K++ +V + SEM +G+ ++ +Y ++ +G+ E
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP------ 319
FE+ V+ +NPN S + + + K G+V++A L+ ++ D +P
Sbjct: 625 NLYFEM--VNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ----KLVNIDMIPGCSIST 678
Query: 320 ------YHYLLSLYGSVGKKEEVYRVWNLY-------------RSVFPGV-------TNL 353
H + ++ + G +WN+ +S+F + N
Sbjct: 679 IEIDKISHVVDTI--ADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNF 736
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y ++I A G I+ + + LS + + N ++ K G +A FN +
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG 453
+G PN ++ TL + + +E + EA LK EG
Sbjct: 797 QSKGISPNGITYNTLIDEYCKEGKTTEAFK-LKQKMVEEG 835
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Query: 153 IAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ K +A A+ F SL + L D Y +L++ + A L D M G +
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK------ 264
+ YN ++ K + ++ ++++ KGI + +YN + +G T +
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829
Query: 265 -------MEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEK 300
ME +L+ ++ V+PN+ T+ T+ YIK G +E+
Sbjct: 830 KMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEE 874
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 166/368 (45%), Gaps = 32/368 (8%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDW--- 131
A+ R L +D+ L A++L + K G S EL ++ L H +VY +
Sbjct: 22 AVSRGLFYLDSRAL--AALLKELHKVGLSNRASELFDWLRSLPDNHELAHLCDVYTYTTI 79
Query: 132 MNNRGERFRLSASDAAIQLDLIAKV--HGVASAEDFFLSLPDTLKDRRVYGALLNAYVRA 189
++ G +L + L+L+A++ HGV + Y AL+N ++A
Sbjct: 80 ISQCGSHQQLRKA-----LELVAEMRGHGVVC-------------NVHTYSALMNVCIKA 121
Query: 190 RMRGNAELLID---KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV 246
EL +D ++ +G + + YN+++ ++ K+ + E ++ ++++G + +V
Sbjct: 122 N---ELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEV 178
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
+YN LS+C G E V+E M D A P TT++ + + Y K G++E+A +
Sbjct: 179 RTYNTILSACNRSGQPEHALRVYERMLADGA-QPTATTYTALISAYGKTGKIEEALRIFQ 237
Query: 307 RVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIG 366
+ R R+ + Y L+S G+ + + + + ++A++S+ A+ G
Sbjct: 238 DMVRRGCERNVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGG 297
Query: 367 DIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWE 426
+ + +FE+ S D +++S + + + +A + + +G +P+ +
Sbjct: 298 QWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYN 357
Query: 427 TLAEGHIR 434
+ E R
Sbjct: 358 VVIEALTR 365
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 160/388 (41%), Gaps = 43/388 (11%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+AS+LND K G L + ++ RY+ A+ V+ M G + L + +
Sbjct: 17 AASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYN--VI 74
Query: 150 LDLIAK-------VHGVASAEDFFLSLPDT------------------------------ 172
L++ K + G+ LPD
Sbjct: 75 LNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMG 134
Query: 173 -LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D+ Y ALL+ Y ++R A ++ +M G + + YN +++ Y + E
Sbjct: 135 FVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAM 194
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ ++M E GI LDV++Y LS G E VF M+ PN TF+ + M
Sbjct: 195 ELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRA-AGCKPNICTFNALIKM 253
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGV 350
+ G+ + + +++ D V ++ LL+++G G EV V+ + R+ F
Sbjct: 254 HGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 313
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y+ +IS+ +R G + I++ L + D N +++ + G ++++E F
Sbjct: 314 RDT-YNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIF 372
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRI 438
+ + KPN ++ +L + + I
Sbjct: 373 AEMKDGRCKPNELTYCSLLHAYANGKEI 400
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 151/360 (41%), Gaps = 27/360 (7%)
Query: 95 NDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIA 154
N +GG +L + ++ + + + A+ V+ M G + + +A I
Sbjct: 198 NQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALI------ 251
Query: 155 KVHG----VASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
K+HG A F + ++ + D + LL + + M + +M+ G+
Sbjct: 252 KMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 311
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
YN +++ Y + +D+ + M E GI D+ +YN L++ G E+ E +
Sbjct: 312 PERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKI 371
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
F MK D PN T+ ++ Y ++ + + S + P+ LL
Sbjct: 372 FAEMK-DGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIE----PHAVLLKTLV 426
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV-----KS 383
V K ++ + F + G+ +S+L + I G ++F + + +S
Sbjct: 427 LVNSKCDLLVEAEV---AFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNES 483
Query: 384 SYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ P +A N +M + + NF+++E I+ +G KP++ S+ T+ + R R+ EA
Sbjct: 484 GFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEA 543
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 163/420 (38%), Gaps = 62/420 (14%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+A+V D + G K ++ K RR K A+EV M G + ++ I
Sbjct: 123 AAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLIS 182
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRV----------YGALLNAYVRARMRGNAELLI 199
A A D L LK++ V Y LL+ +VRA +A +
Sbjct: 183 ----------AYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVF 232
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
+MR G + +N ++ ++ ++ E+ + E+K D+ ++N L+ G
Sbjct: 233 AEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQN 292
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR-VESRITGRDRV 318
G ++ GVF+ MK V P T++T+ + Y + G ++A + +R +E+ IT D
Sbjct: 293 GMDSEVSGVFKEMKRAGFV-PERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGIT-PDLS 350
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
Y+ +L+ G E+ +++ + L Y +++ + A +I M + EE
Sbjct: 351 TYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEI 410
Query: 379 LS---------------------------------VKSSYDPRIA--NLMMSWYVKEGNF 403
S + + P ++ N M+S Y + F
Sbjct: 411 CSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMF 470
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVN 463
K N + E G P+ ++ +L H R + LK AK +P ++
Sbjct: 471 TKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEIL----AKGIKPDTIS 526
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 108/253 (42%), Gaps = 37/253 (14%)
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST------------- 262
V++++ K + S+++++ + G LDVY+Y +++C S G
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 263 -----------------------EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
K++G+FE MK + V P+ T++T+ T + E
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMK-NAGVLPDEYTYNTLITCCRRGSLHE 121
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
+A + ++S D+V Y+ LL +YG + +E V + + Y+++I
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI 181
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
S+ AR G ++ ++ + + + D ++S +V+ G + A F + G K
Sbjct: 182 SAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCK 241
Query: 420 PNSTSWETLAEGH 432
PN ++ L + H
Sbjct: 242 PNICTFNALIKMH 254
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D A+L+ Y R +M +++ M + G+ YN +M ++ + + ++ E ++
Sbjct: 453 DLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVL 512
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KGI+ D SYN + + G ++ +F M+ + + P+ T++T Y
Sbjct: 513 KEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMR-ESGLVPDVITYNTFVASYAA 571
Query: 295 MGQVEKAEESLR 306
E A + +R
Sbjct: 572 DSMFEDAIDVVR 583
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +L+ + R+ +E ++ ++ KG ++ YN ++ Y + E + SEM
Sbjct: 491 TYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEM 550
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+E G+ DV +YN +++S + E V M + PN T++++ Y K
Sbjct: 551 RESGLVPDVITYNTFVASYAADSMFEDAIDVVRYM-IKHGCKPNQNTYNSVVDGYCK 606
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 157/354 (44%), Gaps = 9/354 (2%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
SVL K G LT ++ L K ++ A+E++D M RG ++ ++
Sbjct: 178 SVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG--YQPDVHTYTTIIN 235
Query: 152 LIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+ K+ +A F + + D Y ++++ + R A + M+ KG +
Sbjct: 236 GLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISP 295
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+ YN ++ + E +M++EM I ++ ++++ ++ +G+ + GV
Sbjct: 296 NIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVL 355
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+ M + V PN T+S++ Y +V +A + + ++ D Y+ L++ Y
Sbjct: 356 KTM-TEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCK 414
Query: 330 VGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
+ E +++N +++ + P + + Y+ +I L ++G + +F+ L+ + D
Sbjct: 415 AKRIGEAKQLFNEMIHQGLTPDIVS--YNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 472
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++++ + K+G KA F ++ KPN + L + + R + EA
Sbjct: 473 CTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEA 526
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 149/326 (45%), Gaps = 3/326 (0%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ-LDLIAKVHGVASAEDFFLSLP 170
++ L K RR AL+++ +M +G + ++ IQ L ++ ++ + +SL
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSL- 326
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ + + + L+N + + A ++ M + G + + Y+ +M Y E E
Sbjct: 327 NIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEA 386
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ M KG + DV+SYNI ++ + + +F M + + + P+ +++T+
Sbjct: 387 RKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEM-IHQGLTPDIVSYNTLID 445
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
++G++ +A + + + + D Y LL + G + +R++ +S +
Sbjct: 446 GLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKP 505
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y+ +I ++ + +++ K+F E + +I +++ KEG D+A F
Sbjct: 506 NMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAF 565
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRER 436
++ E+G PN S+ + G ++ +
Sbjct: 566 RNMEEDGCPPNEFSYNVIIRGFLQHK 591
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/337 (18%), Positives = 141/337 (41%), Gaps = 28/337 (8%)
Query: 119 FRRYKHALEVYDWMNNRGERFRLSASDAAIQLD-LIAKVHGVASAEDFFLSLPDTLK--- 174
FR AL ++ M +R R IQ + L++ + + D +SL ++
Sbjct: 99 FRNIDDALAYFNHMLHRKPR------PCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAG 152
Query: 175 ---DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D L+N + + + ++ K+ G + + +N ++ K+ ++ +
Sbjct: 153 LSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAV 212
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ +M +G + DV++Y ++ G T G+F M + P+ T+ST+
Sbjct: 213 ELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMG-EAGCQPDVVTYSTIIDS 271
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
K +V +A + ++++ + Y+ L+ + + E + N + ++ P
Sbjct: 272 LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN 331
Query: 350 VTNLGYHAMISSLARIGDI---EGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFD 404
+ + +I+ + G++ G+ K E +P + +M+ Y +
Sbjct: 332 IVT--FSLLINIFCKEGNVFEARGVLKTMTEM-----GVEPNVVTYSSLMNGYSLQAEVV 384
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+A F+ +I +G KP+ S+ L G+ + +RI EA
Sbjct: 385 EARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEA 421
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 9/290 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ AYVRA LID M + G +++ Y M+ Y + + D+ S+
Sbjct: 349 DAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLY 408
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+MKE G +V +YN L G + +E+M + MKVD PN T++TM +M
Sbjct: 409 DQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCA-PNRITWNTMLSMCGN 467
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G + + + ++S DR ++ L++ G G + ++++ L P V
Sbjct: 468 KGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVAT 527
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+A++++LAR GD E + ++ + +L+++ Y K G
Sbjct: 528 --YNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKD 585
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
I + P+ TL + + R AL+ ++ AF A ++P V
Sbjct: 586 IYDGHIFPSWMLLRTLILANFKCR----ALAGMERAFQALQKHGYKPDLV 631
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 156/343 (45%), Gaps = 11/343 (3%)
Query: 94 LNDW-EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
LND+ E L + +L V+K L + A+ +++W+ ++ + A++L
Sbjct: 122 LNDFFESCKFELFQVDLIGVLKALDLSGDCERAILLFEWLVLNLGTGNVNLDNQAVEL-- 179
Query: 153 IAKV------HGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+A++ H +AS + L D D R Y +L++Y R A + +KM + G
Sbjct: 180 MARILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESG 239
Query: 207 YAVHSLPYNVMMTLYMKI-KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ + YNVM+ +Y K+ + ++++ ++ EM+ KG+ D ++ + +S+CG +G ++
Sbjct: 240 LSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEA 299
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+ F +K + P T++ + ++ K G +A ++ +E D V Y+ L++
Sbjct: 300 KEFFVGLK-SQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVA 358
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
Y G EE + + + Y MI++ R ++ ++++ +
Sbjct: 359 AYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAP 418
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ N ++ K+ ++ + +G PN +W T+
Sbjct: 419 NVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTM 461
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 123/308 (39%), Gaps = 46/308 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR + L+ A R +AE + D+M + G+ YN ++ + ++ ES++
Sbjct: 489 DRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVI 548
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQG---------------------------------- 260
+MK KG + SY++ L+S G
Sbjct: 549 KDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKC 608
Query: 261 -STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
+ ME F+ ++ P+ F++M +M+ + ++A E + ++ D V
Sbjct: 609 RALAGMERAFQALQ-KHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVT 667
Query: 320 YHYLLSLYGSVG---KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y+ L+ LY G K EE+ R ++ + Y+ +I R G + +
Sbjct: 668 YNSLMDLYARGGECWKAEEILREL---QNSGDKSDLISYNTVIKGFCRQGLMHEALRTLS 724
Query: 377 EWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
E +S P I N + Y +G F + + + + + +PN +++ + +G+ +
Sbjct: 725 EMIS--RGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCK 782
Query: 435 ERRILEAL 442
++ EA+
Sbjct: 783 AKKFKEAM 790
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 134/353 (37%), Gaps = 75/353 (21%)
Query: 168 SLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY 221
+L DT+ + + Y ++NAY RA A L D+M++ G A + YN ++ +
Sbjct: 371 ALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGML 430
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-------- 273
K + +E+ ++ +MK G + ++N LS CG++G + ++ VF+ MK
Sbjct: 431 GKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDR 490
Query: 274 --------------------------VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
++ P+ T++ + + G AE ++
Sbjct: 491 DTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKD 550
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRV------------WNLYRSV--------- 346
++++ Y +L+ Y G + + R+ W L R++
Sbjct: 551 MKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRA 610
Query: 347 -------FPGVTNLGY-------HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
F + GY ++M+S +R + +I D N
Sbjct: 611 LAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNS 670
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+M Y + G KAE + G K + S+ T+ +G R+ + EAL L
Sbjct: 671 LMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTL 723
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 1/263 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ALLN + M A+ L+++M DKG + + Y +++ K D+ M+ M+
Sbjct: 340 YNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMR 399
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG+R+ VY YN ++ C + + G M V+ + PN ++S + + G +
Sbjct: 400 EKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEM-VEIGLTPNAASYSPVIAGLCRKGDL 458
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
A E R++ + + + L++ + K +E R++N + ++A+
Sbjct: 459 SGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAV 518
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I +GDI +++++ + + D ++S KA+ F +
Sbjct: 519 IEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCS 578
Query: 419 KPNSTSWETLAEGHIRERRILEA 441
N S L G RE R+ EA
Sbjct: 579 VLNKFSLTALLHGFCREGRLTEA 601
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/304 (18%), Positives = 125/304 (41%), Gaps = 40/304 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+++ + M +A ++D+MR+KG + PYN ++ K + D +SEM
Sbjct: 374 TYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEM 433
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKM 295
E G+ + SY+ ++ +G + G EL + +K V N TF+ + + K
Sbjct: 434 VEIGLTPNAASYSPVIAGLCRKGD---LSGAVELHRKMAEKGVAWNTYTFTALINGFCKA 490
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN------------LY 343
++++A ++ + V ++ ++ Y VG + +++++ Y
Sbjct: 491 KKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTY 550
Query: 344 RSVFPGVT-----------------------NLGYHAMISSLARIGDIEGMEKIFEEWLS 380
RS+ G+ A++ R G + ++ E
Sbjct: 551 RSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAM 610
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
D +++ +K+ + +K+ F + E+G +P++ + + +E +++
Sbjct: 611 WGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQ 670
Query: 441 ALSC 444
AL+C
Sbjct: 671 ALNC 674
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 103/230 (44%), Gaps = 3/230 (1%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
KM +KG A ++ + ++ + K K+ DE + ++M E + + ++N + G
Sbjct: 467 KMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVG 526
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
K +++ M N+T S ++ + + G KA+E + +E+ + ++
Sbjct: 527 DIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDG-ASKAKEFVADLENNCSVLNKFSL 585
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL-GYHAMISSLARIGDIEGMEKIFEEWL 379
LL + G+ E Y VWN +++ G +L + ++ + + D E +F E
Sbjct: 586 TALLHGFCREGRLTEAYHVWN-EMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMK 644
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
D M++ Y KEGN +A ++ +I +G PN+ ++ L
Sbjct: 645 EKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALV 694
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 128/297 (43%), Gaps = 27/297 (9%)
Query: 153 IAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ K+ A A F + L D VY A + AY R A+ L+ +M+D+G V
Sbjct: 172 LVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVS 231
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD-VYSYNIWLSSCGSQGSTEKMEGVF 269
++PYNV++ K + E + + M +G+ D V + C TE+++
Sbjct: 232 AVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFC----RTEELDMAL 287
Query: 270 ELMKVDKA---VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP----YHY 322
E M D A P+ S M K G+VE+A R+ ++ VP Y+
Sbjct: 288 E-MTGDMARLGFVPSEANCSFMLDGLRKKGRVEEA----FRLACQLGELRMVPNIFAYNA 342
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG----MEKIFEEW 378
LL+ G E R+ N + Y +I SL + G ++ ++++ E+
Sbjct: 343 LLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREK- 401
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
V+ + P N +++ K+ + D A F + ++E G PN+ S+ + G R+
Sbjct: 402 -GVRMTVYPY--NSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRK 455
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 150 LDLIAKVHGVASAED-FFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
LD A + +A+D +F L L + L+ + + A LI + + G+
Sbjct: 729 LDYFATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFF 788
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ Y+ ++ K + +E + +EM KG++ D+ +YNI + C G ++K G+
Sbjct: 789 PDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGI 848
Query: 269 FELMKVDKAVNPNWTT 284
+ M V K V PNW T
Sbjct: 849 YIDM-VKKGVQPNWHT 863
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 146/328 (44%), Gaps = 30/328 (9%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKV---HGVASAEDFFLS 168
+V ++RK A ++YD M RG D LI+ + G + A++F
Sbjct: 524 LVGDIRK------AFQLYDQMMCRG-----LTPDNYTYRSLISGLCLTDGASKAKEFVAD 572
Query: 169 LPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
L + ++ ++ ALL+ + R A + ++M G + + + ++ +Y +K+
Sbjct: 573 LENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTII--VYAALKQ 630
Query: 227 YDEVESMV--SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
+D +S V EMKEKG+R D + ++ +G+ + ++ M D + PN T
Sbjct: 631 HDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHL-PNTVT 689
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
++ + K + AE + + + + ++ L + + G E +LY
Sbjct: 690 YTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAK---DLYF 746
Query: 345 SVFPG-VTNL-GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKE 400
++ G + N+ + +I ++G I+ E I S ++ + P + ++ K+
Sbjct: 747 AMLQGFLANIVSVNTLIKGFCKVGQIQ--EAIDLISRSTENGFFPDCISYSTVIHELCKK 804
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETL 428
G+ ++A +N ++ +G KP+ ++ L
Sbjct: 805 GDINEAIELWNEMLYKGVKPDIVAYNIL 832
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 9/267 (3%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D + D YG ++N Y + +A + ++MRD G V+ YN M+ K+ +EV
Sbjct: 319 DIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL--MKVDKAVNPNWTTFSTM 288
+ ++ EM++ G+R D YSYN + +GS K FE+ M V + T++T+
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRK---AFEMCRMMVRNGLAATTLTYNTL 435
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW--NLYRSV 346
+ + ++ A + R + + LL GK E+ +W L R +
Sbjct: 436 LKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGL 495
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
V + ++ +I+ L +IG + E++ + ++ D + Y K G A
Sbjct: 496 AKNV--ITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHI 433
N + G P+ + + GH
Sbjct: 554 THLMNKMEHLGFAPSVEMFNSFITGHF 580
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 132/321 (41%), Gaps = 41/321 (12%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
AL V+D M G R L R LLN
Sbjct: 167 ALNVFDGMGKVGCRPSL-----------------------------------RSCNRLLN 191
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
V++ G A ++ +MR G +M Y + + V EM+ G+ +
Sbjct: 192 KLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEV 251
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
++ +Y+ + G TE + E ++ K ++PN T++ + Y K G++E+AE
Sbjct: 252 NLVAYHAVMDCYCGMGWTEDARRILESLQ-RKGLSPNVVTYTLLVKGYCKDGRMEEAERV 310
Query: 305 LRRVESRITGR---DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
++ E + TG D V Y +++ Y G+ ++ RV N R V Y+ MI+
Sbjct: 311 VK--EMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L ++G +E ++K+ +E V D N ++ Y +EG+ KA ++ G
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428
Query: 422 STSWETLAEGHIRERRILEAL 442
+ ++ TL +G I +AL
Sbjct: 429 TLTYNTLLKGFCSLHAIDDAL 449
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 142/342 (41%), Gaps = 52/342 (15%)
Query: 153 IAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+ K+ +A AE+ + PD+L Y L + Y + G A L++KM G
Sbjct: 509 LCKIGRMAEAEELLDRMKELRCPPDSL----TYRTLFDGYCKLGQLGTATHLMNKMEHLG 564
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST-EKM 265
+A +N +T + K++ +V + SEM +G+ ++ +Y ++ +G+ E
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP------ 319
FE+ V+ +NPN S + + + K G+V++A L+ ++ D +P
Sbjct: 625 NLYFEM--VNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ----KLVNIDMIPGCSIST 678
Query: 320 ------YHYLLSLYGSVGKKEEVYRVWNLY-------------RSVFPGV-------TNL 353
H + ++ + G +WN+ +S+F + N
Sbjct: 679 IEIDKISHVVDTI--ADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNF 736
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y ++I A G I+ + + LS + + N ++ K G +A FN +
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
+G PN ++ TL + + +E + EA LK EG +
Sbjct: 797 QSKGISPNGITYNTLIDEYCKEGKTTEAFK-LKQKMVEEGIQ 837
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 156 VHGVASAE--DFFLSLPDTL------KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+HG A++ D SL D + + Y +L+ ++ A L +K++ KG
Sbjct: 742 IHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGI 801
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ + + YN ++ Y K + E + +M E+GI+ V +Y+I + +QG E+
Sbjct: 802 SPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIK 861
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
+ + M ++ V+PN+ T+ T+ YIK G +E+
Sbjct: 862 LLDQM-IENNVDPNYITYCTLIHGYIKSGNMEE 893
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 85/193 (44%), Gaps = 7/193 (3%)
Query: 153 IAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ K +A A+ F SL + L D Y +L++ + A L D M G +
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
+ YN ++ K + ++ ++++ KGI + +YN + +G T + F+
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE---AFK 826
Query: 271 LMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
L + V++ + P T+S + G +E+A + L ++ + + Y L+ Y
Sbjct: 827 LKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYI 886
Query: 329 SVGKKEEVYRVWN 341
G EE+ ++++
Sbjct: 887 KSGNMEEISKLYD 899
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 131/298 (43%), Gaps = 8/298 (2%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLP-DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
+ ++ + K VA AE +P TL + Y +++ + +A G A L++ M+ K
Sbjct: 230 TVVINGLVKAGKVAEAERVLQEMPVPTLAN---YTSVIGGHCKAGDMGKAYHLLEDMKRK 286
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
GY +L YN ++ + +++E D ++ EMK D+++Y+I ++ +
Sbjct: 287 GYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEA 346
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+ ++ + PN +++T+ + K +V A + + + D V Y L+
Sbjct: 347 RDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIR 406
Query: 326 LYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ G+ E + + + + P V Y ++IS L R G+++ +F+ ++
Sbjct: 407 GLCNAGRASEAHSYLEEMVGKKILPKVPV--YSSVISGLCRAGELDAASTVFDSMVANGC 464
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ + N ++ K G A+ + E G P+ ++ TL G R R EA
Sbjct: 465 QPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEA 522
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 110/270 (40%), Gaps = 8/270 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ + +A +A L +M G + Y+ ++ E S + EM
Sbjct: 366 YNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMV 425
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
K I V Y+ +S G + VF+ M V PN ++++ K G++
Sbjct: 426 GKKILPKVPVYSSVISGLCRAGELDAASTVFDSM-VANGCQPNLAVYNSLIYGLCKTGRL 484
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TNLGYH 356
A+ ++ + R D V Y L+ + +E ++ RS+ G+ + +
Sbjct: 485 CDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLY--VRSLEQGIEISETSCN 542
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I+SL +E +++ L+ +S ++ KE N +A +I
Sbjct: 543 VVIASLR---CLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGA 599
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLK 446
G KP+ ++ + L R+ + + A++ L+
Sbjct: 600 GIKPDGSTVDALVGAMCRQDKAVVAMAFLE 629
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 145/344 (42%), Gaps = 23/344 (6%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L++AY ++ AE L +M+ KG +N++M Y + + + VE +++EM
Sbjct: 376 VYNTLMDAYCKSNRVEEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEM 435
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEG-VFELMKVDKAVNPNWTTFSTMATMYIKMG 296
++ G++ + SY +S+ G Q + M F MK D + P +++ + Y G
Sbjct: 436 QDAGLKPNAKSYTCLISAYGKQKNMSDMAADAFLKMKKD-GIKPTSHSYTALIHAYSVSG 494
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
EKA + ++ Y LL + G + + ++W L R T + ++
Sbjct: 495 WHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRYKVEGTRVTFN 554
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ A+ G + + ++ +V N++M+ Y + G K +
Sbjct: 555 TLVDGFAKHGHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEEMAAH 614
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESD 476
KP+S ++ T+ +R R +A + E KS + VI+F + +
Sbjct: 615 NLKPDSVTYSTMIYAFLRVRDFSQAF-----FYHQEMVKSGQ-----VIDFNSYQKLRAI 664
Query: 477 MGSKEAFVALLRQPGYRKEKDYMSLIGLTDE--AVAENNKKNDE 518
+ +K A + KD SLIG+ V + +K DE
Sbjct: 665 LDAKAAI---------KNRKDRRSLIGVVRNKMGVVKPKRKKDE 699
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 150/332 (45%), Gaps = 13/332 (3%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP--DTLKDRRV 178
+ K A+ Y +M G R + + + I+ L + +A + F +P D
Sbjct: 135 QLKVAMSFYKYMREMGVRQSVVSLNVLIKA-LCKNSGTIDAAFEIFREMPKRGCDPDSYT 193
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG L+N + A+ L +M KG + + Y+ +M + DE + +MK
Sbjct: 194 YGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMK 253
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+K I +V++Y+ + C + GS E ME + E+M V K PN T+ST+ K G+
Sbjct: 254 KKAIEPNVFTYSSLMDGLCKNGGSLEAME-LLEMM-VRKRHKPNMVTYSTLINGLCKEGK 311
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPGVTNLGY 355
+ +A E+L R++ + D Y +++ + ++ K +E Y + + P
Sbjct: 312 LAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSL 371
Query: 356 HAMISSLARIGDIE--GMEKIFEEWLSVKS---SYDPRIANLMMSWYVKEGNFDKAEAFF 410
H ++++ G + + F+ ++ +++ S D + ++ + K+G+ KA F
Sbjct: 372 HVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIF 431
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ ++ +G P+ W + G R++ EA
Sbjct: 432 DEMVLDGCVPDHGIWSAVVGGFWDRRKVREAF 463
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 121/274 (44%), Gaps = 12/274 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
++ ++ Y R M +A + KM D G Y + + ++ + S M
Sbjct: 87 IFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYM 146
Query: 238 KEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+E G+R V S N+ + + C + G+ + +F M + +P+ T+ T+ K+G
Sbjct: 147 REMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMP-KRGCDPDSYTYGTLINGLCKLG 205
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLG 354
+ +A+E + ++++ V Y L+ G +E +++ +++ P V
Sbjct: 206 KTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNV--FT 263
Query: 355 YHAMISSLARI-GDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFN 411
Y +++ L + G +E ME + + V+ + P + + +++ KEG +A +
Sbjct: 264 YSSLMDGLCKNGGSLEAMELL---EMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLD 320
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ +G KP++ + + G R+ EA + L
Sbjct: 321 RMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYL 354
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 108/247 (43%), Gaps = 12/247 (4%)
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE-K 264
G+ + VM++ + E+ E M++ MKE+ R+ + I+LS C G
Sbjct: 45 GFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRI---TEEIFLSICRGYGRVHMP 101
Query: 265 MEGVFELMKV-DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
++ + K+ D P ++ ++ + ++ Q++ A + + + V + L
Sbjct: 102 LDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVL 161
Query: 324 LSLY----GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
+ G++ E++R R P + Y +I+ L ++G +++F+E
Sbjct: 162 IKALCKNSGTIDAAFEIFREMP-KRGCDP--DSYTYGTLINGLCKLGKTFEAKELFKEMD 218
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+ S + +M + GN D+A F+ + ++ +PN ++ +L +G + L
Sbjct: 219 TKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSL 278
Query: 440 EALSCLK 446
EA+ L+
Sbjct: 279 EAMELLE 285
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 38/281 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L++A ++R AE ++++M KG YN ++ LY K + E S+ +M
Sbjct: 202 VYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKM 261
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +GI LD+ SYN + +G KM + K PN T++T+ Y K +
Sbjct: 262 EREGINLDIVSYNSLIYGFCKEG---KMREAMRMFGEIKDAIPNHVTYTTLIDGYCKANE 318
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E E+LR E + + ++PGV Y++
Sbjct: 319 FE---EALRLREMMVA------------------------------KGLYPGVVT--YNS 343
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ L G I K+ E K D N +++ Y K G+ + A F ++E G
Sbjct: 344 ILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAG 403
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWR 458
PNS +++ L G + + A L G A + ++R
Sbjct: 404 LTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYR 444
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 108/282 (38%), Gaps = 3/282 (1%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
AL V D M G + + ++ I K + A F + D + + Y L++
Sbjct: 254 ALSVQDKMEREGINLDIVSYNSLIYG--FCKEGKMREAMRMFGEIKDAIPNHVTYTTLID 311
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
Y +A A L + M KG + YN ++ + ++ EM E+ ++
Sbjct: 312 GYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQA 371
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
D + N +++ G F+ ++ + PN T+ + + K ++E A+E
Sbjct: 372 DSVTCNTLINAYCKIGDLNSALK-FKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKEL 430
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
L + + Y +++ Y + V + + + S + Y A+I L +
Sbjct: 431 LFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCK 490
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
I IE EK+ S D I + Y K GN + A
Sbjct: 491 IERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAA 532
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 173/389 (44%), Gaps = 30/389 (7%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP- 170
++ +L + RR++ + + NR R + A IQ K H V + F +P
Sbjct: 87 LIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQH--YGKAHLVEKGIELFHQMPS 144
Query: 171 -DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ + + + LLN V A + + + G+ +S+ YN+M+ ++K +++
Sbjct: 145 FNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWEQ 204
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ EM EKG++ V +YN L +G + +F+ M +K +PN T++ +
Sbjct: 205 ACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNM-TEKGHHPNAVTYALLM 263
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVF 347
+ +G+ ++A++ + +E V Y L++ G G +E+ + N R +
Sbjct: 264 EGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLK 323
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LMMSWYVKEGNFDK 405
P V Y+ +++ L + G + K+ + + V DP A +M+ Y G+FD
Sbjct: 324 PDVVT--YNILVNYLCKEGKVGDAYKVLVK-MQVGGC-DPNAATYRMMIDGYCNAGDFDG 379
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERR-------ILEALSCLKGAFAAEGAKSWR 458
A N+++ G P+ ++ +L G ++ +LE + + F AE +WR
Sbjct: 380 AMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDAE---TWR 436
Query: 459 PKPVNVINFFKACEEESDMGSK-EAFVAL 486
I C + ++GS F++L
Sbjct: 437 ------ILIMDVCGQHVEIGSHLNDFISL 459
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/291 (16%), Positives = 118/291 (40%), Gaps = 40/291 (13%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+ R+R E ++ +R++ + + ++ Y K ++ + +M
Sbjct: 84 YSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKGIELFHQMP 143
Query: 239 EKGIRLDVYSYNIWLSS---CGS--------------------------------QGSTE 263
+ S+N+ L++ C +G E
Sbjct: 144 SFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWE 203
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+ +F+ M ++K V P+ T+++ + + G+++ A + + + + V Y L
Sbjct: 204 QACNLFDEM-LEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALL 262
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPG--VTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+ + +GK +E ++ ++ F G + + Y +++ L + G+I+ ME + E
Sbjct: 263 MEGWCFIGKYKEAKKL--MFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKR 320
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ D N+++++ KEG A + G PN+ ++ + +G+
Sbjct: 321 RLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGY 371
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 140/318 (44%), Gaps = 21/318 (6%)
Query: 113 VKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT 172
V +L K R + ++E + + R R L AS+A VH ED+ +
Sbjct: 164 VIDLMKARNVEISIETFSILIRRYVRAGL-ASEA---------VHAFNRMEDY-----NC 208
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
D+ + L++ R R A+ D ++DK + + Y ++ + + E E
Sbjct: 209 KPDKIAFSILISILCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIPEAER 267
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ +EMK G +VY+Y I + + G + VF M +D PN TF+ + ++
Sbjct: 268 VFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEM-LDVGCEPNSITFNNLLRVH 326
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGV 350
+K G+ EK + +++ D V Y++L+ + G +E +V N + + P
Sbjct: 327 VKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNA 386
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ ++ + S+A++ D+ G +++ + +K + N++M +V + D
Sbjct: 387 ST--FNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLK 444
Query: 411 NSIIEEGGKPNSTSWETL 428
+ E+ +PN ++ L
Sbjct: 445 KEMDEDDVEPNVNTYCVL 462
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 6/242 (2%)
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G+ H PYN M+ L K++ +D ++ MK + + + + +++I + G +
Sbjct: 137 GFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEA 196
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
F M+ D P+ FS + ++ + + +A+ ++ + D + Y L+
Sbjct: 197 VHAFNRME-DYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKFEP-DVIVYTNLVR 254
Query: 326 LYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ G E RV+ + P V Y +I +L R G I +F E L V
Sbjct: 255 GWCRAGNIPEAERVFTEMKVAGCMPNVYT--YTIVIDALCRCGQITRAHDVFAEMLDVGC 312
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ N ++ +VK G +K +N + G P++ ++ L E H ++ + EAL
Sbjct: 313 EPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALK 372
Query: 444 CL 445
L
Sbjct: 373 VL 374
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 55/126 (43%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ L + + R A L KM++ +++ YN++M +++ K D V + EM
Sbjct: 388 TFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEM 447
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E + +V +Y + ++ G F M +K + P+ + + K GQ
Sbjct: 448 DEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQ 507
Query: 298 VEKAEE 303
++K EE
Sbjct: 508 LKKHEE 513
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 88/214 (41%), Gaps = 11/214 (5%)
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK------DRRVYGALLNAYVRA 189
E + +I + + +VH A + L + + +K D Y L+ ++ +
Sbjct: 305 AEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKD 364
Query: 190 RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSY 249
A +++ M KG + ++ +N + K+++ + + ++MKE + + +Y
Sbjct: 365 GNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTY 424
Query: 250 NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
NI + ST+ + + + M D V PN T+ + MY MG A + R +
Sbjct: 425 NILMRMFVDTKSTDMVLKLKKEMDEDD-VEPNVNTYCVLIAMYCGMGHWNNAYKFFREMV 483
Query: 310 SRITGRDRVPYH----YLLSLYGSVGKKEEVYRV 339
+ +P + L G + K EE+ V
Sbjct: 484 EEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAV 517
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 165/379 (43%), Gaps = 16/379 (4%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
+I N + M G SVL K G L ++K L + K AL +
Sbjct: 94 LITLNILINCFCHMGQITFG-FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFH 152
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYV 187
D + +G F+L+ ++ + K+ +A + L V Y +++A
Sbjct: 153 DKLLAQG--FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALC 210
Query: 188 RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY 247
+ ++ A L +M KG + + Y+ ++ + + E +++EM K I +VY
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY 270
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
+YNI + + +G ++ + V +M + V P+ T+ST+ Y + +V+KA+
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVM-LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSL 362
+ D Y L++ + K + V NL+ +++ PG+ Y ++I L
Sbjct: 330 MSLMGVTPDVHTYTILINGF---CKNKMVDEALNLFKEMHQKNMVPGIVT--YSSLIDGL 384
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
+ G I + + +E + + ++ K G+ D+A A FN + ++G +PN+
Sbjct: 385 CKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNT 444
Query: 423 TSWETLAEGHIRERRILEA 441
++ L +G + R+ +A
Sbjct: 445 FTFTILLDGLCKGGRLKDA 463
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
LID+M D+G + + Y+ ++ K D ++ ++MK++GIR + +++ I L
Sbjct: 396 LIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLC 455
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G + + VF+ + + K + N T++ M + K G +E+A L ++E D
Sbjct: 456 KGGRLKDAQEVFQDL-LTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDA 514
Query: 318 VPYH-YLLSLY------GSVGKKEEVYRVWNLYRSVFPGVT 351
V + +++L+ G+VG ++V+ + + P +T
Sbjct: 515 VTFEIIIIALFKKDENGGNVGFDKKVWEIVEHKKGETPSIT 555
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 210 HSLP---YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
H+ P +N ++ + K+K Y S+ ++ KGI+ D+ + NI ++ G +
Sbjct: 55 HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG--QITF 112
Query: 267 GVFELMKVDK-AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
G L K+ K P+ T +T+ GQV+KA ++ ++ ++V Y L++
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLIN 172
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+G ++ + Y +I +L + + +F E S
Sbjct: 173 GVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 232
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
D + ++ + EG +A N ++ + PN ++ L + +E ++ EA S L
Sbjct: 233 DVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 118/302 (39%), Gaps = 9/302 (2%)
Query: 150 LDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
LD AK+ ++A L L D L+N + ++ K+ +GY
Sbjct: 66 LDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGY 125
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
++ N ++ + + ++ +G +L+ SY ++ G T
Sbjct: 126 PPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTR--AA 183
Query: 268 VFELMKVD-KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
+ L K+D + PN +ST+ K V +A + + D V Y L+
Sbjct: 184 IKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 243
Query: 327 YGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
+ GK +E + N + +++ P V Y+ ++ +L + G ++ + + L
Sbjct: 244 FCIEGKLKEAIGLLNEMVLKTINPNVYT--YNILVDALCKEGKVKEAKSVLAVMLKACVK 301
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
D + +M Y KA+ FN++ G P+ ++ L G + + + EAL+
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361
Query: 445 LK 446
K
Sbjct: 362 FK 363
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/256 (16%), Positives = 114/256 (44%), Gaps = 14/256 (5%)
Query: 183 LNAYVRA-----RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ AY+R + A L ++ KG N+++ + + + S+++++
Sbjct: 928 VGAYIRIPHNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKI 987
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++G D ++ ++ +G K + + + + N ++ T+ K+G
Sbjct: 988 LKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKL-LAQGFQLNQVSYGTLINGVCKIGD 1046
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV-FPGVTN--LG 354
A + LR+++ R+T D V Y+ ++ ++ K + V + + L+ + G++ +
Sbjct: 1047 TRAAIKLLRKIDGRLTKPDVVMYNTIID---ALCKHQLVSKAYGLFFEMNVKGISADVVT 1103
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN--FDKAEAFFNS 412
Y+ +I +G ++ + + + + + R N+++ KEG D++ + +
Sbjct: 1104 YNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSK 1163
Query: 413 IIEEGGKPNSTSWETL 428
+ + G K N+ ++E +
Sbjct: 1164 MEDNGCKANAVTFEII 1179
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
Query: 169 LPDTLKDRR------VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
L D + DR Y +L++ + A L +KM+D+G ++ + +++
Sbjct: 396 LIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLC 455
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
K + + + ++ KG L+VY+YN+ + QG E+ + M+ D P+
Sbjct: 456 KGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKME-DNGCIPDA 514
Query: 283 TTFSTMATMYIK 294
TF + K
Sbjct: 515 VTFEIIIIALFK 526
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK--DRRVYGAL 182
AL +D + +G F+L+ ++ + K+ +A + L D +Y +
Sbjct: 1015 ALHFHDKLLAQG--FQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTI 1072
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
++A + ++ A L +M KG + + YN ++ + + + E ++++M K I
Sbjct: 1073 IDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTI 1132
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV-DKAVNPNWTTFSTMATMYIKMGQVEKA 301
+V +YNI + + +G E + L K+ D N TF + + + + +K
Sbjct: 1133 NPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKV 1192
Query: 302 EESLRRVESR 311
E+ L + +R
Sbjct: 1193 EKLLHEMIAR 1202
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 122/268 (45%), Gaps = 15/268 (5%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +++ + A ++++M +KG Y +++ + + DE + +
Sbjct: 9 DVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELF 68
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M E+G + +YN ++ + E+ + E M K P+ T++T+ + +
Sbjct: 69 HKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM-ASKGYEPDNITYNTILSGLCR 127
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLL-SLYGSVGKKEEVYRVWNLY-------RSV 346
MG+V +A++ + SR D V Y+ LL +LY K+ +V W L+ R V
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY----KEGKVAEAWGLFKTMDMADRKV 183
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
P + + Y+ +I R+ + K+F++ ++ D N ++ ++ N D+A
Sbjct: 184 APDL--ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIR 434
E F +++ G PN ++ + GH R
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCR 269
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 159/370 (42%), Gaps = 44/370 (11%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K + ALE+ + M +G + I +D + + V A++ F + +
Sbjct: 16 IISGLCKTGKVTEALEMVEEMTEKG--VNPDVATYTIIVDRLCRAGKVDEADELFHKMIE 73
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ Y AL+N + A L+++M KGY ++ YN +++ ++ + E
Sbjct: 74 RGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSE 133
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV-DKAVNPNWTTFSTM 288
+ M +G DV +YN L + +G + G+F+ M + D+ V P+ T++T+
Sbjct: 134 AKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTL 193
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL---LSLYGSVGKKEEVY-------- 337
+ ++ + ++A + + V ++ D V Y+ + L+ ++ + EE++
Sbjct: 194 IDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGC 253
Query: 338 ---------------RVWNLYRSV-----------FPGVTNLGYHAMISSLARIGDIEGM 371
RV N+ R + P V L +A+I L + ++
Sbjct: 254 APNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDV--LLCNAVIDMLCKAKKVDDA 311
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
K+ EE + + D N+++ K DKA F+++++ G P+ S+ + G
Sbjct: 312 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 371
Query: 432 HIRERRILEA 441
+ ++ +A
Sbjct: 372 LCKTNKVHDA 381
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 130/297 (43%), Gaps = 11/297 (3%)
Query: 153 IAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+A+ + AE+ F + D+ + Y +L+ + R L ++M +K ++
Sbjct: 232 LARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPD 291
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
L N ++ + K K+ D+ ++ EM + G DV +YNI L +K +F
Sbjct: 292 VLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 351
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M VD P+ ++S + K +V A R+ R D V ++ L+
Sbjct: 352 TM-VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA 410
Query: 331 GKKEEVYRVWNLY--RSVFP-GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
GK +E + ++ +V P GVT ++ L R + ++F+ + + D
Sbjct: 411 GKLDEAKDLLDVMSEHNVLPDGVT---CTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADV 467
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK--PNSTSWETLAEGHIRERRILEAL 442
N++++ +EG +A FF S+++ G+ P+ ++ TL I R+ +A+
Sbjct: 468 LPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAV 524
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 237 MKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
M EKG DV +Y+ +S C + TE +E V E+ +K VNP+ T++ + +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEM--TEKGVNPDVATYTIIVDRLCRA 58
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G+V++A+E ++ R + V Y
Sbjct: 59 GKVDEADELFHKMIERGCSANTV-----------------------------------AY 83
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+A+I+ L + +IE K+ EE S D N ++S + G +A+ FF+S+
Sbjct: 84 NALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPS 143
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
G P+ ++ L + +E ++ EA
Sbjct: 144 RGYSPDVVAYNGLLDALYKEGKVAEA 169
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 153/405 (37%), Gaps = 58/405 (14%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L + + A + +D M +RG + A + LD + K VA A F ++
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGL--LDALYKEGKVAEAWGLFKTMD- 177
Query: 172 TLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
+ DR+V Y L++ + R A L + KGY ++ YN ++ +
Sbjct: 178 -MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
DE E M +M + G + +Y+I LS G+ + ++E M +K +P+
Sbjct: 237 NMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEM-TEKRFSPDVLLC 295
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ + M K +V+ A + L + D V Y+ LL + K V + L+ +
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD---GLCKTNLVDKAHELFST 352
Query: 346 VF-----PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
+ P + + Y +++ L + + +F+ + K D N++M K
Sbjct: 353 MVDNGCAPDIVS--YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA 410
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER------------------------ 436
G D+A+ + + E P+ + TL G R++
Sbjct: 411 GKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPH 470
Query: 437 -----------RILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA 470
++ +AL K ++G + P V A
Sbjct: 471 NIVLAGLCREGKLAQALLFFKSMVKSDG--EFSPDVVTYTTLVNA 513
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/328 (17%), Positives = 124/328 (37%), Gaps = 48/328 (14%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGAL 182
LE+Y+ M + RF +D++ K V A +S + D Y L
Sbjct: 276 CLELYEEMTEK--RFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNIL 333
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
L+ + + A L M D G A + Y+V++ K + + + M E+ +
Sbjct: 334 LDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 393
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
DV ++NI + G ++ + + ++M + V P+ T +T+ + + ++A
Sbjct: 394 VPDVVTFNILMDGLCKAGKLDEAKDLLDVMS-EHNVLPDGVTCTTLMHGLCRDKRTDEAV 452
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
+ + + T D +P++ +L + L
Sbjct: 453 RLFQYMVEKGTVADVLPHNIVL-----------------------------------AGL 477
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
R G + F+ + + P + +++ ++ G D+A +F + G P
Sbjct: 478 CREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAP 537
Query: 421 NSTSWETLAEG------HIRERRILEAL 442
+ ++ TL G HI+ R+ +A+
Sbjct: 538 DYVAYNTLMNGLRKQGRHIQADRLTQAM 565
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 151/333 (45%), Gaps = 21/333 (6%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRL-SASDAAIQLDLIAKV---HGVASAEDFF- 166
++K+L K A+E+++W+ N L S D +I+ V A D
Sbjct: 175 LLKDLSKAGLGFRAVEIFEWLRNLDANHPLASLCDVYTYTAMISMCIYQQDVDRAMDLAK 234
Query: 167 -LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK---MRDKGYAVHSLPYNVMMTLYM 222
+ + + ++ Y AL+N ++ GN L +D MR G + + YN ++ +Y
Sbjct: 235 EMRVRNIERNVHTYTALMNVCIKC---GNCPLALDTYNHMRQDGACPNVVTYNTLIDVYG 291
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
K+ +++ +++ MK +G+ + +YN + +C G + V++ M +D+ +PN
Sbjct: 292 KMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRM-LDEGYSPNA 350
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
TT++ + + Y K GQ++K E + + + R + Y L+S G+ E ++N
Sbjct: 351 TTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNE 410
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ Y+++I++ A+ E ++FE+ + D ++S Y K G
Sbjct: 411 MAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQ 470
Query: 403 FDKAEAFFNSIIEEGGKPNS--------TSWET 427
+ +A + + + KP++ T WET
Sbjct: 471 WRRALGAYEQMRLQRCKPDAIVFNAIIDTLWET 503
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 11/262 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMR--DKGYAVHSL----PYNVMMTLYMKIKEYD 228
D R LL +A + A + + +R D + + SL Y M+++ + ++ D
Sbjct: 168 DSRATALLLKDLSKAGLGFRAVEIFEWLRNLDANHPLASLCDVYTYTAMISMCIYQQDVD 227
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ EM+ + I +V++Y ++ C G+ + M+ D A PN T++T+
Sbjct: 228 RAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTYNHMRQDGAC-PNVVTYNTL 286
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSV 346
+Y KMG E+ + L +++ Y+ L+ G+ E V+ L
Sbjct: 287 IDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGY 346
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
P T Y+A+IS+ + G ++ + ++F+E + + ++S K G ++ A
Sbjct: 347 SPNATT--YNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELA 404
Query: 407 EAFFNSIIEEGGKPNSTSWETL 428
FN + EG PN+ ++ +L
Sbjct: 405 LELFNEMAGEGCIPNTVTYNSL 426
>gi|125556718|gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indica Group]
gi|125598467|gb|EAZ38247.1| hypothetical protein OsJ_22623 [Oryza sativa Japonica Group]
Length = 478
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 176/416 (42%), Gaps = 27/416 (6%)
Query: 41 KHQRQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSA-SVLNDWEK 99
+H R+ + C + G V + RP W + R + L S+ +L D +
Sbjct: 27 RHDRRVGGAVACRATA----GPVGSQERP---WESYDRGIQHHAGSDLASSLRLLADMQA 79
Query: 100 GGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGV 159
G + R+++ L + R A + M G R + +A ++ L++ H +
Sbjct: 80 AGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLE-GLLSTAH-L 137
Query: 160 ASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
A+ L + D ++RR Y LLNAY RA ++ ++ +M+ +G + + Y+ +
Sbjct: 138 RLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTL 197
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ LY + + ++ EM+E G+ LDV YN + + G G VF+ M +
Sbjct: 198 VRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAE-G 256
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
V P+ TT++++ + ++G ++A ++ D + ++S G GK
Sbjct: 257 VKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGK----- 311
Query: 338 RVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS-------YDPRIA 390
W+ + +F G+ N G + A + DI G F + ++ P I
Sbjct: 312 --WDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIF 369
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++ + Y ++G ++ + EG +PN L R LEAL+ L+
Sbjct: 370 CVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQ 425
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 1/267 (0%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y L+ A + + A L ++M++KG + Y V++ K + DE M+SE
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M EKG+ V +YN + +G + + +LM+ + PN T++ + K
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME-SNSCGPNTRTYNELICGLCKKR 418
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+V KA L ++ R + Y+ L+ V E YR+ +L Y
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
I +L + G +E +F+ + + I ++ Y K G D A + ++ +
Sbjct: 479 VFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND 538
Query: 417 GGKPNSTSWETLAEGHIRERRILEALS 443
PNS ++ L EG +E+++ EA S
Sbjct: 539 ACLPNSYTYNVLIEGLCKEKKMKEASS 565
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 13/296 (4%)
Query: 158 GVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
GV +A + FL +P ++ Y L++ A A L M + Y
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
V++ E ++ +EMKEKG +V++Y + + + ++ + M +
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS-E 362
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
K + P+ T++ + Y K G ++ A E L +ES G + Y+ L+ + KK +
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC---GLCKKRK 419
Query: 336 VYRVWNLY-----RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
V++ L R + P + + Y+++I ++ D+E ++ D
Sbjct: 420 VHKAMALLNKMLERKLSPSL--ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++ + KEG ++A F+S+ +G K N + L +G+ + +I A S L+
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE 533
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 7/264 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y AL++ Y + A L+++M + +S YNV++ K K+ E S+V++M
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G++ V +Y I + G+ + VF M V P+ T++ Y G
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM-VSLGYQPDVCTYTAFLHAYFSQGM 629
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+E+ ++ + ++ D V Y L+ Y +G +R ++ + + +
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL---THRAFDFLKCMVDTGCKPSLY- 685
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++S L + E K + + S + ++ W E ++ A F ++E G
Sbjct: 686 IVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLE--YEIALKLFEKMVEHG 743
Query: 418 GKPNSTSWETLAEGHIRERRILEA 441
+ + + L G ++ R+ EA
Sbjct: 744 CTIDVSIYGALIAGFCQQERLEEA 767
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 17/265 (6%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++LN +RAR+ G AE + M ++ +V+ L EV ++
Sbjct: 104 YSSMLNILIRARLLGVAEKIRISMIKSCCSIE----DVLFVL--------EVFRKMNADG 151
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E + + YN L S ++M+ V+ L ++ ++PN TF+ M Y K+G V
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVY-LELLNNQISPNIYTFNAMVNGYCKIGNV 210
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+AE ++ D Y L+ + + Y V+ + + Y +
Sbjct: 211 VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNL 270
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA--FFNSIIEE 416
I L G I K+F + + + P + + Y G+ K EA FN + E+
Sbjct: 271 IHGLCEAGRINEALKLFADM--TEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK 328
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
G +PN ++ L +G +E ++ EA
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEA 353
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +YGAL+ + + A+ L+ M+++G + YN ++ K+ Y E +V
Sbjct: 747 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 806
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
M E G+ + SY + + +GS EK + VF
Sbjct: 807 DAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVF 841
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 85/222 (38%), Gaps = 15/222 (6%)
Query: 156 VHGVASAEDF-----FLSLPD---TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+HG D LSL + + D+ Y ++ + A L D ++ KG
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKME 266
+ + Y ++ Y K+ + D S++ M + Y+YN+ + C + E
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
V +++ + V P T++ + +K G + A + + S D Y L
Sbjct: 566 LVAKMLTM--GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623
Query: 327 YGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIG 366
Y S G EEV V + P + Y +I AR+G
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVT--YTVLIDGYARLG 663
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 122/271 (45%), Gaps = 5/271 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L+ A+ + + +++++MR++G YN ++ + K K +E + + EM
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 512
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E+ +R + ++Y ++ G E + F M + V PN ++ + + K G
Sbjct: 513 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM-LSCGVLPNVGIYTALIEGHCKEGN 571
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGY 355
V +A R + SR +D Y L+ GK E + +++ + + P Y
Sbjct: 572 VTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA--FTY 629
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++IS + G+++ ++ EE + D N+++ K G ++A+ F+ I
Sbjct: 630 NSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEG 689
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G PN ++ + +G+ + + A L+
Sbjct: 690 RGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 720
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 6/245 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ +A A+ L D + +G + + Y M+ Y K K ++
Sbjct: 660 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLL 719
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM +G+ D + YN+ L+ C + EK +F+ M ++K + +F+T+ Y K
Sbjct: 720 EEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM-LEKGF-ASTVSFNTLIEGYCK 777
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW--NLYRSVFPGVTN 352
G++++A L + + + V Y L+ G E R+W R+V P T
Sbjct: 778 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMP--TA 835
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y +++ IG++ + +FEE ++ D +M+ Y +EGN +A +
Sbjct: 836 KTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDE 895
Query: 413 IIEEG 417
I+ +G
Sbjct: 896 ILVKG 900
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 157/402 (39%), Gaps = 54/402 (13%)
Query: 88 LGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRL-SASDA 146
L S+L D KG + W K +K +VY + N ++ + DA
Sbjct: 190 LSCNSLLGDLLKGNKVELFW------KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDA 243
Query: 147 A-IQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
+ L++ K + A + S+ D + D Y L+N + + A+L++ +M
Sbjct: 244 KRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMI 303
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
D G + YN ++ +M+ + ++ + EM GI ++ +N L+ G
Sbjct: 304 DVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAG--- 360
Query: 264 KMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR---------- 311
KME E+M+ ++K V P+ T+S + + + + +A E L ++ R
Sbjct: 361 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 420
Query: 312 --ITGRDR-----------------------VPYHYLLSLYGSVGKKEEVYRVWNLYR-- 344
I G R V Y L++ + G+ EE + R
Sbjct: 421 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 480
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ P V Y+++I + +E E L + + + Y K G +
Sbjct: 481 GILPDV--FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEME 538
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
A+ +FN ++ G PN + L EGH +E + EA S +
Sbjct: 539 IADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 580
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 125/307 (40%), Gaps = 41/307 (13%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L+D + Y L++ R A + ++++KG ++ YN +++ K D+
Sbjct: 587 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 646
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ EM KGI D+ +YNI + G E+ + +F+ ++ + + PN T++ M
Sbjct: 647 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE-GRGLTPNCVTYAAMVDG 705
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-- 349
Y K A + L + R D Y+ +L+ K+E+ + +L++ +
Sbjct: 706 YCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF---CCKEEKFEKALDLFQEMLEKGF 762
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWL---------SVKSSYDPRIANLMMS----- 395
+ + ++ +I + G ++ + EE + + S D MM
Sbjct: 763 ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 822
Query: 396 W---------------------YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
W Y GN + A F ++ +G +P+ ++ + + + R
Sbjct: 823 WLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCR 882
Query: 435 ERRILEA 441
E ++EA
Sbjct: 883 EGNVMEA 889
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 137/299 (45%), Gaps = 22/299 (7%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDK 201
I +D + K + A++ F D ++ R + Y A+++ Y +++ A L+++
Sbjct: 666 ILIDGLCKAGEIERAKNLF----DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 721
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
M +G + YNV++ K +++++ + EM EKG V S+N + G
Sbjct: 722 MLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGK 780
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
++ + E M ++K PN T++++ K G + +A+ ++ R Y
Sbjct: 781 LQEANHLLEEM-IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYT 839
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
LL Y ++G EV ++ + + + P + Y+ MI + R G++ K+ +E L
Sbjct: 840 SLLHGYHNIGNMSEVSALFEEMVAKGIEP--DKMTYYVMIDAYCREGNVMEACKLKDEIL 897
Query: 380 ----SVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+KS + + +++ + GN D+A S+++ G N+TS L +G+
Sbjct: 898 VKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGN 956
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 129/309 (41%), Gaps = 47/309 (15%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y +L+ + +A+ A + +M ++ ++ Y + Y K E + +
Sbjct: 483 LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 542
Query: 233 MVSEMKEKGI---------------------------------RL--DVYSYNIWLSSCG 257
+EM G+ R+ DV +Y++ +
Sbjct: 543 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLS 602
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G + G+F ++ +K + PN T++++ + K G V+KA + L + + D
Sbjct: 603 RNGKMHEAFGIFSELQ-EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDI 661
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSLARIGDIEGME 372
V Y+ L+ + K E+ R NL+ R + P Y AM+ + +
Sbjct: 662 VTYNILID---GLCKAGEIERAKNLFDDIEGRGLTPNCVT--YAAMVDGYCKSKNPTAAF 716
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
++ EE L D I N+++++ KE F+KA F ++E+ G ++ S+ TL EG+
Sbjct: 717 QLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK-GFASTVSFNTLIEGY 775
Query: 433 IRERRILEA 441
+ ++ EA
Sbjct: 776 CKSGKLQEA 784
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 18/253 (7%)
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+S+ ++++M Y K+ E ++ K R + S N L E VF
Sbjct: 153 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 212
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR-------------ITGRD 316
+ M K + P+ T++ M + + K+G V+ A+ L + + + +
Sbjct: 213 DGMCAHKVL-PDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271
Query: 317 RVP--YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN--LGYHAMISSLARIGDIEGME 372
VP Y Y + + G +K L + G+ + Y+A+I R GDIE
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+I +E ++ + I N +++ K G +KA ++E+G +P+S ++ L EGH
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 391
Query: 433 IRERRILEALSCL 445
R + + A L
Sbjct: 392 CRGQNMARAFELL 404
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 112/267 (41%), Gaps = 5/267 (1%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y +LLN Y +A + A LL +R G A L YN+++ Y ++ + +E
Sbjct: 369 LPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARR 428
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM E+G DVY+Y I + + S F+ M + K + P+ ++T
Sbjct: 429 LKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEM-LSKGLRPDCFAYNTRICAE 487
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG--KKEEVYRVWNLYRSVFPGV 350
I +G + K+ + + D V Y+ L+ G K E + + + P
Sbjct: 488 ITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDC 547
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y +I + G + K F + +S +++ Y + GN A +F
Sbjct: 548 --ITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWF 605
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERR 437
++EEG +PN ++ L R R
Sbjct: 606 RKMLEEGVEPNEITYNVLIHALCRMGR 632
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 118/254 (46%), Gaps = 8/254 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAV--HSLPYNVMMTLYMKIKEYDEVESMVS 235
Y LL+++ + + ++L+ +M +G + + + YNV++ + K Y E + +
Sbjct: 233 TYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLAR-KGYLEEAAELV 291
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
E + ++YN ++ ++G +K++ + +L ++ + P T++ M ++
Sbjct: 292 EEMRLSKKASSFTYNPLITGLLARGFVKKVDDL-QLEMENEGIMPTVVTYNAMIHGLLQS 350
Query: 296 GQVEKAEESLRRVESRITG--RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
GQ+E A+ VE R G D + Y+ LL+ Y G ++E ++ R T L
Sbjct: 351 GQIEAAQAKF--VEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVL 408
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ +I R+GD+E ++ EE + D ++M + FF+ +
Sbjct: 409 TYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEM 468
Query: 414 IEEGGKPNSTSWET 427
+ +G +P+ ++ T
Sbjct: 469 LSKGLRPDCFAYNT 482
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 107/248 (43%), Gaps = 15/248 (6%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M ++G + YN M+ ++ + + ++ EM+ G+ DV +YN L+ G
Sbjct: 327 EMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAG 386
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP- 319
+ ++ +F ++ + P T++ + Y ++G +E+A RR++ + + +P
Sbjct: 387 NQKEALLLFGDLR-RAGLAPTVLTYNILIDGYCRLGDLEEA----RRLKEEMVEQGCLPD 441
Query: 320 -YHYLLSLYGS-----VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
Y Y + + GS + E + L + + P Y+ I + +GDI +
Sbjct: 442 VYTYTILMKGSHNVCSLAMTREFFDEM-LSKGLRPDC--FAYNTRICAEITLGDISKSFQ 498
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
+ E + S D N+++ K GN AE +I G +P+ ++ L H
Sbjct: 499 LREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHC 558
Query: 434 RERRILEA 441
+ EA
Sbjct: 559 ERGFLREA 566
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 6/218 (2%)
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV-DKAVNPNWTTF 285
+D++ ++ +EM + GI + +YN L S +G +K++ + + M+ + PN T+
Sbjct: 212 WDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTY 271
Query: 286 STMATMYIKMG--QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
+ + + G + R+ + + P L G V K +++ ++
Sbjct: 272 NVVIAGLARKGYLEEAAELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDL-QLEMEN 330
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+ P V Y+AMI L + G IE + F E ++ D N +++ Y K GN
Sbjct: 331 EGIMPTVVT--YNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQ 388
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+A F + G P ++ L +G+ R + EA
Sbjct: 389 KEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEA 426
>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
Length = 492
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 176/416 (42%), Gaps = 27/416 (6%)
Query: 41 KHQRQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSA-SVLNDWEK 99
+H R+ + C + G V + RP W + R + L S+ +L D +
Sbjct: 27 RHDRRVGGAVACRATA----GPVGSQERP---WESYDRGIQHHAGSDLASSLRLLADMQA 79
Query: 100 GGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGV 159
G + R+++ L + R A + M G R + +A ++ L++ H +
Sbjct: 80 AGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLE-GLLSTAH-L 137
Query: 160 ASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
A+ L + D ++RR Y LLNAY RA ++ ++ +M+ +G + + Y+ +
Sbjct: 138 RLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTL 197
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ LY + + ++ EM+E G+ LDV YN + + G G VF+ M +
Sbjct: 198 VRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAE-G 256
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
V P+ TT++++ + ++G ++A ++ D + ++S G GK
Sbjct: 257 VKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGK----- 311
Query: 338 RVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS-------YDPRIA 390
W+ + +F G+ N G + A + DI G F + ++ P I
Sbjct: 312 --WDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIF 369
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++ + Y ++G ++ + EG +PN L R LEAL+ L+
Sbjct: 370 CVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQ 425
>gi|302798905|ref|XP_002981212.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
gi|300151266|gb|EFJ17913.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
Length = 414
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/394 (20%), Positives = 159/394 (40%), Gaps = 53/394 (13%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
+ K L V+ +LR ++ A E+ DWM R + F + SD + L+L+ ++ +
Sbjct: 1 MEKKHLLNVIYKLRITAKFGQAREICDWMI-RNKVFEIEESDHVLLLELVGRISKFQATR 59
Query: 164 DFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
F+ +P L+ Y A+L + R AE + +M+ PYN+M+ +Y +
Sbjct: 60 CFW-EMPAELRSEDAYTAMLQVFARWHAIPAAEDTMSEMKSLNLITRVEPYNIMLDMYKR 118
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
E D+V +M E+ G+ D ++Y I L + G + +E +V K ++ T
Sbjct: 119 KNEDDKVRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGFDGIEA-----EVRKFLDEQLT 173
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
+ + Y +L +Y + + + ++
Sbjct: 174 SRQPLFI-----------------------------YECMLRIYTLLRDLAAIENLRSIL 204
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
F ++ Y+ ++ S ++G++E E++F E + K + + + M++ Y G
Sbjct: 205 LKTFKKFSSSSYNCLLDSYRQLGEVERAERLFNE-IGNKFTLNIQSYRAMIAVYASNGRM 263
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSW------ 457
+KA + + G + + + + G+I R AL + K+W
Sbjct: 264 EKANELYKQLFRAGFECHPAIYHAMVAGYIDARDHSNAL--------IQYGKAWDRSLLG 315
Query: 458 RPKPVNVINF--FKACEEESDMGSKEAFVALLRQ 489
PKP+ + E+ D E+ V L++
Sbjct: 316 HPKPLRATTLLVLRVLAEQGDFSRAESIVRDLKR 349
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 19/276 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++++ V++ +A L++ M KG + + + Y+ ++ K + DE +++
Sbjct: 219 DVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 278
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M G ++ +YN + G ++ + E M VD PN T++ + + K
Sbjct: 279 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM-VDGGCQPNVVTYTVLLDAFCK 337
Query: 295 MGQVEKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWNLYRSVF--- 347
G KAE+++ VE + + VP Y+ LL ++ KK+EV R L S+
Sbjct: 338 CG---KAEDAIGLVEVMVE-KGYVPNLFTYNSLLDMFC---KKDEVERACQLLSSMIQKG 390
Query: 348 --PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
P V + Y+ +I+ L + + + E+ LS D N ++ K D
Sbjct: 391 CVPNVVS--YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 448
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A FN I E G PN ++ +L G + RR +A
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 484
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 120/270 (44%), Gaps = 6/270 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N ++ +A L+++M D G+A + YN ++ + K + ++
Sbjct: 43 DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLL 102
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M +G DV SY ++ ++ V + M + + PN T+ T+ + +
Sbjct: 103 EQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM-IQRGCQPNVITYGTLVDGFCR 161
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR---SVFPGVT 351
+G ++ A E +R++ R + + Y+ ++ S K + +++ S P V
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDV- 220
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y ++ SL + G ++ ++ E +S S + + ++ K G D+A A
Sbjct: 221 -FTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQ 279
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ G PN ++ T+ +GH + RI EA
Sbjct: 280 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 6/271 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+A+ + +A L++ M +KGY + YN ++ ++ K E + ++S M
Sbjct: 328 YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 387
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGV--FELMKVDKAVNPNWTTFSTMATMYIKMG 296
+KG +V SYN ++ G +T+ EGV E M + V P+ TF+T+ K
Sbjct: 388 QKGCVPNVVSYNTVIA--GLCKATKVHEGVLLLEQMLSNNCV-PDIVTFNTIIDAMCKTY 444
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLL-SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+V+ A E ++ + V Y+ L+ L S + Y + + R + Y
Sbjct: 445 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 504
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +I L + ++ K+F + LS + D ++++S K D+A +++
Sbjct: 505 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 564
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G P + ++ TL +G + + +AL L+
Sbjct: 565 NGFDPGAITYGTLIDGFCKTGNLDKALEILQ 595
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 128/313 (40%), Gaps = 49/313 (15%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y ++N + A ++DKM +G + + Y ++ + ++ + D
Sbjct: 112 PDVVS----YTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDG 167
Query: 230 VESMVSEMKEKGIR------------------------------------LDVYSYNIWL 253
+V +M E+G R DV++Y+ +
Sbjct: 168 AVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIV 227
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
S G + + E M V K +PN T+S++ K G++++A L+R+
Sbjct: 228 DSLVKSGKVDDACRLVEAM-VSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 286
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
+ V Y+ ++ + +G+ +E Y + + P V Y ++ + + G E
Sbjct: 287 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVT--YTVLLDAFCKCGKAEDA 344
Query: 372 EKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
+ E + V+ Y P + N ++ + K+ ++A +S+I++G PN S+ T+
Sbjct: 345 IGLVE--VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 402
Query: 430 EGHIRERRILEAL 442
G + ++ E +
Sbjct: 403 AGLCKATKVHEGV 415
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 110/266 (41%), Gaps = 4/266 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++ +A LL+++M + +N ++ K D + + ++
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 457
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E G ++ +YN + ++ E + M + +P+ T++T+ K +V
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 517
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL-YRSVF-PGVTNLGYH 356
++A + ++ S D V Y ++S +E V L ++ F PG + Y
Sbjct: 518 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGA--ITYG 575
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I + G+++ +I + LS S D ++ + W K G +A +++
Sbjct: 576 TLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA 635
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G P++ ++ TL +G R +A+
Sbjct: 636 GLVPDTVTYNTLLKGFCDASRTEDAV 661
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 159/380 (41%), Gaps = 39/380 (10%)
Query: 67 RRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHAL 126
R +I +N I M P A +++ + G + + ++ R+ Y+ A
Sbjct: 252 RPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAA 311
Query: 127 EVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAY 186
EV++ M K G + D+ Y ALL+ Y
Sbjct: 312 EVFEEM----------------------KAAGFS-------------PDKVTYNALLDVY 336
Query: 187 VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV 246
++R A ++ +M G+A + YN +++ Y + DE + S+M +KGI+ DV
Sbjct: 337 GKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDV 396
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
++Y LS G + VFE M+V PN TF+ + M+ G + +
Sbjct: 397 FTYTTLLSGFEKTGKDDYAMKVFEEMRV-AGCQPNICTFNALIKMHGNRGNFVEMMKVFE 455
Query: 307 RVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYHAMISSLARI 365
++ D V ++ LL+++G G EV V+ + R+ F + ++ +IS+ +R
Sbjct: 456 EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDT-FNTLISAYSRC 514
Query: 366 GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
G + I+ L + D N +++ + G ++++E + + KPN ++
Sbjct: 515 GFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTY 574
Query: 426 ETLAEGHIRERRILEALSCL 445
+L + + + E +S L
Sbjct: 575 CSLLHAYANGKEV-ERMSAL 593
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 9/279 (3%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ + + + D + LL + + M + +M+ G+ +N +++ Y +
Sbjct: 457 IKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGF 516
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+D+ ++ M + G+ D+ +YN L++ G E+ E V MK D PN T+
Sbjct: 517 FDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMK-DGRCKPNELTYC 575
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR-- 344
++ Y +VE+ + S I V L+ +Y E R + R
Sbjct: 576 SLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQ 635
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGN 402
P +T L +AM+S R + +I S + P + N +M Y + +
Sbjct: 636 GFSPDITTL--NAMVSIYGRRRMVSKTNEILN--FIKDSGFTPSLTTYNSLMYMYSRTEH 691
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F+K+E II +G KP+ S+ T+ + R R+ EA
Sbjct: 692 FEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEA 730
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 117/268 (43%), Gaps = 15/268 (5%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +LL+AY + L +++ ++ ++ +Y K E E E+
Sbjct: 573 TYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLEL 632
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+E+G D+ + N +S G + K + +K D P+ TT++++ MY +
Sbjct: 633 REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK-DSGFTPSLTTYNSLMYMYSRTEH 691
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
EK+E+ LR + ++ D + ++ ++ Y G+ +E R++ + + Y+
Sbjct: 692 FEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNT 751
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPR--IANLMMSWYVKEGNFDKAEAFFNSIIE 415
I+S A D +E I +K+ P N ++ W+ K D+A +F +++
Sbjct: 752 FIASYA--SDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNL-- 807
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
P+ T E ERR+LE L+
Sbjct: 808 RNLDPSVTKDE--------ERRLLERLN 827
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 85/177 (48%), Gaps = 1/177 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D A+++ Y R RM +++ ++D G+ YN +M +Y + + +++ E ++
Sbjct: 640 DITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDIL 699
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KG++ D+ S+N + + G ++ +F MK D + P+ T++T Y
Sbjct: 700 REIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK-DFGLAPDVITYNTFIASYAS 758
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
+A + ++ + ++ Y+ L+ + + +++E + R++ P VT
Sbjct: 759 DSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRNLDPSVT 815
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 36/224 (16%)
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
S++ +++ G+ +D+Y+Y +++ S G + VF+ ++ ++ P T++ + +
Sbjct: 206 SLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLE-EEGCRPTLITYNVILNV 264
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
Y KMG S+I G L+ S G ++Y
Sbjct: 265 YGKMGMPW----------SKIAG--------LVDSMKSSGVAPDLYT------------- 293
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y+ +ISS R E ++FEE + S D N ++ Y K +A
Sbjct: 294 ---YNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLK 350
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
+ G P+ ++ +L + R+ + EA+ LK +G K
Sbjct: 351 EMEASGFAPSIVTYNSLISAYARDGLLDEAME-LKSQMVKKGIK 393
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 148/340 (43%), Gaps = 13/340 (3%)
Query: 110 CRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ--LDLIAKVHGVASAEDFFL 167
C +V + +++ + + + M G ++AA+ +D + K + SA D +
Sbjct: 292 CTLVLGFCRVQQFDDGICLMNEMVELG----FVPTEAAVSGLVDGLRKKGNIDSAYDLVV 347
Query: 168 SLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
L L + VY AL+NA + AELL M ++ + Y++++ + K
Sbjct: 348 KLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRG 407
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
D ES M E GIR +Y YN ++ G E ++ M +++ + P TTF
Sbjct: 408 MLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKM-INEGLEPTATTF 466
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LY 343
+T+ + Y K QVEKA + R + + + L+ S + E ++++ +
Sbjct: 467 TTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVE 526
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
R + P T + Y+ MI + +++ ++ E+ L D ++S G
Sbjct: 527 RKIKP--TEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRV 584
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
A+ F + + ++ K N + L G+ + R+ EALS
Sbjct: 585 SAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALS 624
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 107/271 (39%), Gaps = 37/271 (13%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ A+ ID + K ++ + Y+ ++ Y E S
Sbjct: 567 DTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSAS 626
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM ++GI +D+ + + + Q +++ G+ + M D+ + P+ +++M Y K
Sbjct: 627 CEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKM-YDQGLRPDSVIYTSMIDAYSK 685
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G +K+ E L + + FP V
Sbjct: 686 EGSFKKSGECLDLMVTE---------------------------------KCFPNVVT-- 710
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y A ++ L ++G+I+ +FE+ L+ S + + KEGN +A + ++
Sbjct: 711 YTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML 770
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+G N+ ++ L G + R++EA L
Sbjct: 771 -KGLLANTATYNILIRGFCKLGRLIEATKVL 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 93/225 (41%), Gaps = 6/225 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+ KM D+G S+ Y M+ Y K + + + M + +V +Y +++
Sbjct: 660 LLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLC 719
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G ++ +FE M + ++PN T+ K G +++A + + + +
Sbjct: 720 KVGEIDRAGHLFEKM-LTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLA-NT 777
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
Y+ L+ + +G+ E +V + +FP + Y +I R GD+ +++
Sbjct: 778 ATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDC--ITYSTIIYEHCRSGDVGAAVELW 835
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
+ L D NL++ G DKA N ++ G KP
Sbjct: 836 DTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKP 880
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 144/344 (41%), Gaps = 19/344 (5%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V++ L + + + A E WM + RF LS + + + K GV A + SL +
Sbjct: 224 VIRSLCELKDFCRAKEKILWMES--NRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLRE 281
Query: 172 T-LK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
LK D Y L+ + R + + L+++M + G+ + ++ K D
Sbjct: 282 KGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDS 341
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+V ++ G +++ YN +++ +K E +++ M + N T+S +
Sbjct: 342 AYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMH-SMNLPLNDVTYSILI 400
Query: 290 TMYIKMGQVEKAEESL-RRVESRITGRDRV-PYHYLLS---LYGSVGKKEEVYRVWNLYR 344
+ K G ++ AE R +E I R+ + PY+ L++ +G + E +Y +
Sbjct: 401 DSFCKRGMLDVAESYFGRMIEDGI--RETIYPYNSLINGHCKFGDLSAAEFLYTKM-INE 457
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ P T + +IS + +E K++ E + P + Y +
Sbjct: 458 GLEPTATT--FTTLISGYCKDLQVEKAFKLYREM--NEKEIAPSVYTFTALIYGLCSTNE 513
Query: 405 KAEA--FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
AEA F+ ++E KP ++ + EG+ + + +A L+
Sbjct: 514 MAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLE 557
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 58/314 (18%), Positives = 118/314 (37%), Gaps = 79/314 (25%)
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG-------------------- 241
+R+KG + Y ++ + +++++D+ +++EM E G
Sbjct: 279 LREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGN 338
Query: 242 --------IRL-------DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
++L +++ YN +++ +K E +++ M + N T+S
Sbjct: 339 IDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMH-SMNLPLNDVTYS 397
Query: 287 TMATMYIKMGQVEKAEESL-RRVESRITGRDRV-PYHYLLSLYGSVG------------- 331
+ + K G ++ AE R +E I R+ + PY+ L++ + G
Sbjct: 398 ILIDSFCKRGMLDVAESYFGRMIEDGI--RETIYPYNSLINGHCKFGDLSAAEFLYTKMI 455
Query: 332 -------------------KKEEVYRVWNLYR-----SVFPGVTNLGYHAMISSLARIGD 367
K +V + + LYR + P V + A+I L +
Sbjct: 456 NEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYT--FTALIYGLCSTNE 513
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
+ K+F+E + K N+M+ Y K N DKA ++ G P++ ++
Sbjct: 514 MAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRP 573
Query: 428 LAEGHIRERRILEA 441
L G R+ A
Sbjct: 574 LISGLCSTGRVSAA 587
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 123/253 (48%), Gaps = 5/253 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y AL+N ++A A+ + +M ++G + + + YN+++ + ++ E + +
Sbjct: 37 TYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVEASKRKTTERRRLAVAL 96
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
GI+ +V +YN +S+C G E+ V+E M + V P+ TT++ + + Y K GQ
Sbjct: 97 VRSGIQAEVRTYNTVISACNKSGQPEQALKVYEKM-LAAGVKPSATTYTALISAYGKKGQ 155
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGY 355
VEKA + R + R R+ + Y L+S G+ E +++ + P V Y
Sbjct: 156 VEKALDIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVT--Y 213
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++I++ + G E ++FE+ + D +++ Y + G + +A F +
Sbjct: 214 NSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQS 273
Query: 416 EGGKPNSTSWETL 428
+G P++ + +L
Sbjct: 274 QGCHPDAAVFNSL 286
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
Y M++ ++ +V+EM+ +GI +V++Y+ ++ C + + V++ M
Sbjct: 3 YTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM- 61
Query: 274 VDKAVNPNWTTFSTMATMYI-KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
+++ +PN T++ + + K E+ ++ V S I R Y+ ++S G+
Sbjct: 62 LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRT-YNTVISACNKSGQ 120
Query: 333 KEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
E+ +V+ L V P T Y A+IS+ + G +E IF + + +
Sbjct: 121 PEQALKVYEKMLAAGVKPSATT--YTALISAYGKKGQVEKALDIFRDMIRRGCERNVITY 178
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ ++S K G ++ A F+ + +E KPN ++ +L
Sbjct: 179 SSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSL 216
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 8/180 (4%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y +++A ++ A + +KM G + Y +++ Y K + ++ + +
Sbjct: 106 RTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRD 165
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M +G +V +Y+ +S+C G E +F M + PN T++++ G
Sbjct: 166 MIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKEN-CKPNVVTYNSLIAACSHGG 224
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
EKA E +++++ D + Y L++ Y G+ W F + + G H
Sbjct: 225 HWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQ-------WRRALKAFEQMQSQGCH 277
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 123/271 (45%), Gaps = 8/271 (2%)
Query: 178 VYGALLNAYVRARMRGN---AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
Y L++ Y + G A+ ++ +MR G + + +N+++ + K K +
Sbjct: 200 TYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVF 259
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM +G++ +V +YN ++ + G + + + M V+ + PN T + + + K
Sbjct: 260 AEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQM-VNSCLKPNIITHNALLNGFCK 318
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
V++A E + + + Y+ L+ Y E+ + ++ L + V P V+
Sbjct: 319 NKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVST 378
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I+ L R GD+E + E + D N+++ +G KA +
Sbjct: 379 --YNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDE 436
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ +G KP+ ++ T+ +G+ +E + AL+
Sbjct: 437 MCRKGLKPSQLTYNTMIDGYCKEGNLRAALN 467
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 129/294 (43%), Gaps = 21/294 (7%)
Query: 148 IQLDLIAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLIDK 201
I +D K V++A F + P+ + Y +L+N A L D+
Sbjct: 241 ILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVV----TYNSLINGLCNNGKVNEATALRDQ 296
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQG 260
M + + + +N ++ + K K + + +M ++GI +V +YNI + + C
Sbjct: 297 MVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYC---- 352
Query: 261 STEKMEGVFELMKV--DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
E ME F L ++ K V P+ +T++ + + G +E A + ++++ D +
Sbjct: 353 KDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLI 412
Query: 319 PYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y+ L+ + G+ ++ R+ + + + P + L Y+ MI + G++ +
Sbjct: 413 TYNILIDSLCNKGEMKKALRLLDEMCRKGLKP--SQLTYNTMIDGYCKEGNLRAALNLRS 470
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+ V + N+++ + K+ + A N ++E+G PN ++E + E
Sbjct: 471 QMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTE 524
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 116/248 (46%), Gaps = 14/248 (5%)
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
D G + N +M+ +K+ E ++E + EM + I + S+NI ++ G
Sbjct: 121 DYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLN 180
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE---KAEESLRRVESRITGRDRVPY 320
K + E MKV + V+ N T++T+ Y KMG++ KA+ L+ + + + V +
Sbjct: 181 KAGDIIEDMKV-RGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTF 239
Query: 321 HYLLSLYG---SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
+ L+ + +V +V+ N + V P V Y+++I+ L G + + ++
Sbjct: 240 NILIDGFCKDKNVSAAMKVFAEMN-RQGVKPNVVT--YNSLINGLCNNGKVNEATALRDQ 296
Query: 378 WLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
V S P I N +++ + K +A F+ + ++G PN T++ L + + ++
Sbjct: 297 M--VNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKD 354
Query: 436 RRILEALS 443
+ +A +
Sbjct: 355 ENMEDAFA 362
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L++ V+ G+ E + +M + + +N+++ K+ + ++ ++ +MK +G
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193
Query: 242 IRLDVYSYNIWLSS-C--GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ +V +YN + C G G K + + + M+ D + PN TF+ + + K V
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRAD-GICPNEVTFNILIDGFCKDKNV 252
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPGVTNLGYH 356
A + + + + V Y+ L++ + GK E R + + P + + ++
Sbjct: 253 SAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNI--ITHN 310
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
A+++ + ++ ++F++ K P + N+++ Y K+ N + A A + ++
Sbjct: 311 ALLNGFCKNKMVKQAGELFDDM--PKQGITPNVTTYNILIDAYCKDENMEDAFALYRIML 368
Query: 415 EEGGKPNSTSWETLAEGHIRE 435
+G P+ +++ L G R+
Sbjct: 369 GKGVCPDVSTYNCLIAGLCRK 389
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 131/310 (42%), Gaps = 40/310 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +++ +A++ AE + +M D G + YN ++ Y+ I ++ EV M+
Sbjct: 237 DVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRML 296
Query: 235 SEMKE-----------------------------------KGIRLDVYSYNIWLSSCGSQ 259
EM KGI+ V +Y I L ++
Sbjct: 297 EEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATK 356
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G+ +M + LM V ++PN F+ + Y K G ++KA + ++ + D V
Sbjct: 357 GALSEMHDLLNLM-VANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVS 415
Query: 320 YHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y L+ +G+ ++ +N + V P + + + +++ L + E +E++F E
Sbjct: 416 YGALIDALCKLGRVDDAEVKFNQMINEGVTPDI--VVFSSLVYGLCTVDKWEKVEELFFE 473
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
L+V + N ++ KEG + + +SI G +P+ S+ TL +GH
Sbjct: 474 MLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGT 533
Query: 438 ILEALSCLKG 447
I EA L+G
Sbjct: 534 IDEASKLLEG 543
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 118/268 (44%), Gaps = 5/268 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG+LLN + A D M KG Y +M+ Y E+ +++ M
Sbjct: 310 TYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLM 369
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
GI + + +NI+ S+ G +K +F M+ + ++P+ ++ + K+G+
Sbjct: 370 VANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMR-QQGLSPDAVSYGALIDALCKLGR 428
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW--NLYRSVFPGVTNLGY 355
V+ AE ++ + D V + L+ +V K E+V ++ L + P + + +
Sbjct: 429 VDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNI--VFF 486
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ ++ +L + G + +++ + + D N ++ + G D+A ++
Sbjct: 487 NTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS 546
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
G KP+S S+ TL G+ + RI A S
Sbjct: 547 VGLKPDSFSYNTLLHGYCKAGRIDSAYS 574
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 155/402 (38%), Gaps = 73/402 (18%)
Query: 48 PVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMD----NPQLGS-ASVLNDWEKGGR 102
P I IH Y ++ KW + R L M P + S+LN K GR
Sbjct: 271 PNIDTYNCLIHGYLSIG-------KWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGR 323
Query: 103 SLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASA 162
CR E R F +D M +G + S + I L A ++
Sbjct: 324 -------CR---EARFF---------FDSMIGKG--IKPSVTTYGIMLHGYATKGALSEM 362
Query: 163 EDFF-LSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTL 220
D L + + + + ++ +AY + + A + +KMR +G + ++ Y ++
Sbjct: 363 HDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDA 422
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV-FELMKVDKAVN 279
K+ D+ E ++M +G+ D+ ++ + + EK+E + FE++ V ++
Sbjct: 423 LCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNV--GIH 480
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
PN F+T+ K G+V + + + +E +G + +V
Sbjct: 481 PNIVFFNTILCNLCKEGRVMEGQRLVDSIE-------------------CMGVRPDV--- 518
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+ Y+ +I G I+ K+ E +SV D N ++ Y K
Sbjct: 519 -------------ISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCK 565
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
G D A + F ++ G P ++ T+ G + +R EA
Sbjct: 566 AGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 102/253 (40%), Gaps = 1/253 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++N + L +M D+G + Y ++ K + +D E++ +M
Sbjct: 206 YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI 265
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G++ ++ +YN + S G +++ + E M PN T+ ++ K G+
Sbjct: 266 DNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGP-KPNCCTYGSLLNYLCKNGRC 324
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+A + + Y +L Y + G E++ + NL + + ++
Sbjct: 325 REARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIF 384
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
S+ A+ G I+ IF + S D ++ K G D AE FN +I EG
Sbjct: 385 FSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGV 444
Query: 419 KPNSTSWETLAEG 431
P+ + +L G
Sbjct: 445 TPDIVVFSSLVYG 457
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 116/300 (38%), Gaps = 33/300 (11%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD+ Y LL+ Y +A +A KM G + YN ++ + K + E
Sbjct: 551 PDSFS----YNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSE 606
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ + M G + D+Y+YNI L+ ++ +F+ + K + N TF+ M
Sbjct: 607 AKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNL-CSKGLQLNIITFNIMI 665
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+K G+ E A + + + ++ V Y ++ G EE +++
Sbjct: 666 GALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTA 725
Query: 350 VTNLGYHAMISSLARIGDIEG----MEKIFEEWLSVKSSYDPRIANLMMS---------- 395
+ +A++ L GDI + K+ E SV++S + ++ S
Sbjct: 726 PNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL 785
Query: 396 ----WYVKEGN----------FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ E N D A + F ++ +G P+ ++ T+ G + R EA
Sbjct: 786 PKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 845
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/341 (16%), Positives = 137/341 (40%), Gaps = 36/341 (10%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +LN ++ A + + KG ++ + +N+M+ +K ++ +
Sbjct: 622 DIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 681
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ + G+ +V +Y + + + +GS E+ + +F M+ PN + + +
Sbjct: 682 AAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAME-KNGTAPNSQMLNALVRRLLH 740
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS------------------------- 329
G + +A L +++ R + L+S++ S
Sbjct: 741 RGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSAL 800
Query: 330 VGKKEEVYRVWNLYRSVF-PGVTN--LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
+ K + ++L+R + G+T + Y+ ++ L + G ++++ ++ ++ +
Sbjct: 801 IKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMN 860
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
N++++ K D+A F S+ +G + N ++ + ++ R +A+
Sbjct: 861 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMD--- 917
Query: 447 GAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALL 487
FAA A P +V+ + E + GS E F L
Sbjct: 918 -LFAAIPANGLVP---DVVTYRLVAENLIEEGSLEEFDGLF 954
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK--AVNPNWTTF 285
+ ++ ++ M E G D SYNI L ++ E+ + +M D+ + PN ++
Sbjct: 147 EAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSY 206
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR- 344
ST+ + GQV+K + R D V Y ++ + K + R +++
Sbjct: 207 STVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVID---GLCKAQLFDRAEAVFQQ 263
Query: 345 ----SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
V P + Y+ +I IG + + ++ EE + + ++++ K
Sbjct: 264 MIDNGVKPNIDT--YNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKN 321
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
G +A FF+S+I +G KP+ T++ + G+
Sbjct: 322 GRCREARFFFDSMIGKGIKPSVTTYGIMLHGY 353
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/171 (16%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 160 ASAEDFFLSLPDTLKDRRVY--GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
+ A++ +LS+ ++ +Y +LN ++ A + + KG ++ + +N+M
Sbjct: 843 SEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIM 902
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ +K ++ + + + G+ DV +Y + + +GS E+ +G+F + ++K+
Sbjct: 903 IGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLF--LTMEKS 960
Query: 278 VNP-NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
P + + + ++ G + +A L +++ + + L+SL+
Sbjct: 961 GTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLF 1011
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 159/380 (41%), Gaps = 39/380 (10%)
Query: 67 RRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHAL 126
R +I +N I M P A +++ + G + + ++ R+ Y+ A
Sbjct: 252 RPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAA 311
Query: 127 EVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAY 186
EV++ M K G + D+ Y ALL+ Y
Sbjct: 312 EVFEEM----------------------KAAGFS-------------PDKVTYNALLDVY 336
Query: 187 VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV 246
++R A ++ +M G+A + YN +++ Y + DE + S+M +KGI+ DV
Sbjct: 337 GKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDV 396
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
++Y LS G + VFE M+V PN TF+ + M+ G + +
Sbjct: 397 FTYTTLLSGFEKTGKDDYAMKVFEEMRV-AGCQPNICTFNALIKMHGNRGNFVEMMKVFE 455
Query: 307 RVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYHAMISSLARI 365
++ D V ++ LL+++G G EV V+ + R+ F + ++ +IS+ +R
Sbjct: 456 EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDT-FNTLISAYSRC 514
Query: 366 GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
G + I+ L + D N +++ + G ++++E + + KPN ++
Sbjct: 515 GFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTY 574
Query: 426 ETLAEGHIRERRILEALSCL 445
+L + + + E +S L
Sbjct: 575 CSLLHAYANGKEV-ERMSAL 593
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 9/279 (3%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ + + + D + LL + + M + +M+ G+ +N +++ Y +
Sbjct: 457 IKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGF 516
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+D+ ++ M + G+ D+ +YN L++ G E+ E V MK D PN T+
Sbjct: 517 FDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMK-DGRCKPNELTYC 575
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR-- 344
++ Y +VE+ + S I V L+ +Y E R + R
Sbjct: 576 SLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQ 635
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGN 402
P +T L +AM+S R + +I S + P + N +M Y + +
Sbjct: 636 GFSPDITTL--NAMVSIYGRRRMVSKTNEILN--FIKDSGFTPSLTTYNSLMYMYSRTEH 691
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F+K+E II +G KP+ S+ T+ + R R+ EA
Sbjct: 692 FEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEA 730
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 117/268 (43%), Gaps = 15/268 (5%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +LL+AY + L +++ ++ ++ +Y K E E E+
Sbjct: 573 TYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLEL 632
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+E+G D+ + N +S G + K + +K D P+ TT++++ MY +
Sbjct: 633 REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK-DSGFTPSLTTYNSLMYMYSRTEH 691
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
EK+E+ LR + ++ D + ++ ++ Y G+ +E R++ + + Y+
Sbjct: 692 FEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNT 751
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPR--IANLMMSWYVKEGNFDKAEAFFNSIIE 415
I+S A D +E I +K+ P N ++ W+ K D+A +F +++
Sbjct: 752 FIASYA--SDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNL-- 807
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
P+ T E ERR+LE L+
Sbjct: 808 RNLDPSVTKDE--------ERRLLERLN 827
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 85/177 (48%), Gaps = 1/177 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D A+++ Y R RM +++ ++D G+ YN +M +Y + + +++ E ++
Sbjct: 640 DITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDIL 699
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KG++ D+ S+N + + G ++ +F MK D + P+ T++T Y
Sbjct: 700 REIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK-DFGLAPDVITYNTFIASYAS 758
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
+A + ++ + ++ Y+ L+ + + +++E + R++ P VT
Sbjct: 759 DSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRNLDPSVT 815
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 36/224 (16%)
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
S++ +++ G+ +D+Y+Y +++ S G + VF+ ++ ++ P T++ + +
Sbjct: 206 SLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLE-EEGCRPTLITYNVILNV 264
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
Y KMG S+I G L+ S G ++Y
Sbjct: 265 YGKMGMPW----------SKIAG--------LVDSMKSSGVAPDLYT------------- 293
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y+ +ISS R E ++FEE + S D N ++ Y K +A
Sbjct: 294 ---YNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLK 350
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
+ G P+ ++ +L + R+ + EA+ LK +G K
Sbjct: 351 EMEASGFAPSIVTYNSLISAYARDGLLDEAME-LKSQMVKKGIK 393
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 126/269 (46%), Gaps = 5/269 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y AL+ + A+ L+++M G + YN M+ Y+K + V+ ++SEMK
Sbjct: 379 YNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMK 438
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ + Y+ + ++ GS E VFE+M V V PN ++T+ +++ G+
Sbjct: 439 KSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIM-VSLGVKPNAVIYTTLIKGHVQEGRF 497
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV--YRVWNLYRSVFPGVTNLGYH 356
++A L+ ++ + D + Y+ ++ K EE Y V + R + P V Y
Sbjct: 498 QEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYT--YG 555
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
A+I + G+++ ++ F+E L + + + ++ Y KEG+ +A + F ++
Sbjct: 556 ALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGR 615
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCL 445
P+ ++ L G +R ++ A+ L
Sbjct: 616 SVHPDVRTYSALIHGLLRNGKLQGAMELL 644
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 5/278 (1%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ L D Y L+NA+ RA + L+ +M +KG + + YNV++ + E DE
Sbjct: 231 NVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEA 290
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ M +KG+ DV++Y+I + G Q + + + E M K + P ++ +
Sbjct: 291 FELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEM-FSKGLKPGHVAYTALID 349
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
+++ G +A + +R + Y+ L+ G E+ + N V
Sbjct: 350 GFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKP 409
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR--IANLMMSWYVKEGNFDKAEA 408
Y+ MI + + ++ + E KS+ P ++++ + G+ + A
Sbjct: 410 DTQTYNNMIEGYLKEQNTSRVKDLLSEM--KKSNLVPTAYTCGMIINGLCRHGSIEDASR 467
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
F ++ G KPN+ + TL +GH++E R EA+ LK
Sbjct: 468 VFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILK 505
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 6/270 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y AL+N +A A L D + KG A +++ Y ++ Y K + + EM
Sbjct: 694 YNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMT 753
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
KG+ D + Y+ + C +G+TEK +F L V K + ++ + + + K G+V
Sbjct: 754 LKGVPPDSFVYSALIDGCRKEGNTEKALSLF-LESVQKGF-ASTSSLNALMDGFCKSGKV 811
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVG--KKEEVYRVWNLYRSVFPGVTNLGYH 356
+A + L + + D V Y L+ + G K+ E + V R++ P L Y
Sbjct: 812 IEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNA--LTYT 869
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
A++S G M +F+E ++ D ++M+ ++KEG+ K + ++++
Sbjct: 870 ALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKK 929
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLK 446
GG + L + R+ + E L L+
Sbjct: 930 GGNVSKNVCHVLIDPLCRKEHVSEVLKVLE 959
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 9/263 (3%)
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
G ++N R +A + + M G +++ Y ++ +++ + E ++ M +
Sbjct: 450 GMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDK 509
Query: 240 KGIRLDVYSYN-IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
KG++ DV YN + + C S+ E + + E+ +++ + PN T+ + Y K G++
Sbjct: 510 KGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEM--IERGLKPNVYTYGALIHGYCKSGEM 567
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+ A+ + + + V L+ Y GS + ++R L RSV P V Y
Sbjct: 568 QVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM-LGRSVHPDVRT--Y 624
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
A+I L R G ++G ++ E+L D N ++S + K+G KA + +
Sbjct: 625 SALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQ 684
Query: 416 EGGKPNSTSWETLAEGHIRERRI 438
+G PN ++ L G + I
Sbjct: 685 KGISPNIITYNALINGLCKAGEI 707
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 134/304 (44%), Gaps = 42/304 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y L+ +V+ A ++ M KG L YN ++ K ++ +E + + EM
Sbjct: 483 IYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEM 542
Query: 238 KEKGIRLDVYSYNIWLS-------------------SCG----------------SQGST 262
E+G++ +VY+Y + CG +GST
Sbjct: 543 IERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGST 602
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
+ +F M + ++V+P+ T+S + ++ G+++ A E L + D Y+
Sbjct: 603 TEATSIFRCM-LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNS 661
Query: 323 LLSLY---GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
++S + G +GK +++ + + + P + + Y+A+I+ L + G+IE ++F+
Sbjct: 662 IISGFCKQGGIGKAFQLHE-YMCQKGISPNI--ITYNALINGLCKAGEIERARELFDGIP 718
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+++ ++ Y K GN KA F+ + +G P+S + L +G +E
Sbjct: 719 GKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTE 778
Query: 440 EALS 443
+ALS
Sbjct: 779 KALS 782
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 112/260 (43%), Gaps = 6/260 (2%)
Query: 175 DRRVYGALLNAYVR-ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
D R Y AL++ +R +++G ELL + +KG YN +++ + K + +
Sbjct: 620 DVRTYSALIHGLLRNGKLQGAMELL-SEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQL 678
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
M +KGI ++ +YN ++ G E+ +F+ + K + N T++T+ Y
Sbjct: 679 HEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIP-GKGLAHNAVTYATIIDGYC 737
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G + KA + + D Y L+ G E+ ++ SV G +
Sbjct: 738 KSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLF--LESVQKGFAST 795
Query: 354 -GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+A++ + G + ++ E+ + D +++ ++ K G +AE FF
Sbjct: 796 SSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVD 855
Query: 413 IIEEGGKPNSTSWETLAEGH 432
+ + PN+ ++ L G+
Sbjct: 856 MQKRNLMPNALTYTALLSGY 875
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 19/276 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++++ V++ +A L++ M KG + + + Y+ ++ K + DE +++
Sbjct: 947 DVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 1006
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M G ++ +YN + G ++ + E M VD PN T++ + + K
Sbjct: 1007 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM-VDGGCQPNVVTYTVLLDAFCK 1065
Query: 295 MGQVEKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWNLYRSVF--- 347
G KAE+++ VE + + VP Y+ LL ++ KK+EV R L S+
Sbjct: 1066 CG---KAEDAIGLVEVMVE-KGYVPNLFTYNSLLDMFC---KKDEVERACQLLSSMIQKG 1118
Query: 348 --PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
P V + Y+ +I+ L + + + E+ LS D N ++ K D
Sbjct: 1119 CVPNVVS--YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 1176
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A FN I E G PN ++ +L G + RR +A
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 1212
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/323 (17%), Positives = 130/323 (40%), Gaps = 10/323 (3%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK----DRRVYG 180
A E++D MN +G + + A + ++ + D L + K D Y
Sbjct: 180 AYELFDEMNRKGLK-----AHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYN 234
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
++N ++ +A L+++M D G+A + YN ++ + K + ++ +M +
Sbjct: 235 TMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTR 294
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G DV SY ++ ++ V + M + + PN T+ T+ + ++G ++
Sbjct: 295 GCPPDVVSYTTVINGLCKLDQVDEACRVMDKM-IQRGCQPNVITYGTLVDGFCRVGDLDG 353
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A E +R++ R + + Y+ ++ ++ E ++V + + Y +IS
Sbjct: 354 AVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIIS 413
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
+ G + + E+ + D + ++ K D A+ I P
Sbjct: 414 GFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAP 473
Query: 421 NSTSWETLAEGHIRERRILEALS 443
+ ++ L + +R+ EA S
Sbjct: 474 DVVAYSILIHALCKAKRLPEAES 496
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 145/336 (43%), Gaps = 11/336 (3%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V K L+ R AL +DW ++ E + L + ++ A + +
Sbjct: 814 VGKVLQGVRNGDAALGFFDWATSQ-EGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLC 872
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ + L++ RA G A L+ +M G + + +NV++ ++ D
Sbjct: 873 CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSAL 932
Query: 232 SMVSEMKEKG-IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ EM+E G DV++Y+ + S G + + E M V K +PN T+S++
Sbjct: 933 ELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDM-VSKGCSPNVVTYSSLLH 991
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFP 348
K G++++A L+R+ + V Y+ ++ + +G+ +E Y + + P
Sbjct: 992 GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQP 1051
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKA 406
V Y ++ + + G E + E + V+ Y P + N ++ + K+ ++A
Sbjct: 1052 NVVT--YTVLLDAFCKCGKAEDAIGLVE--VMVEKGYVPNLFTYNSLLDMFCKKDEVERA 1107
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+S+I++G PN S+ T+ G + ++ E +
Sbjct: 1108 CQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 149/341 (43%), Gaps = 23/341 (6%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNR-GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP 170
V K L++ AL ++W R G + + + L+++ K H + A D F S
Sbjct: 96 VGKVLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCL--LNVLVKAHQYSQAHDLFRSRI 153
Query: 171 DTL--KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+ D Y L++ ++RA A L D+M KG H+ V ++ + +
Sbjct: 154 EGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHA---GVHKSILRGLCDAG 210
Query: 229 EVESMVSEMKE--KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTT 284
+ V +E K D +YN ++ +++++ L++ VD PN +
Sbjct: 211 QCSDAVLHFREMSKTCPPDSVTYNTMIN---GLSKSDRLDDAIRLLEEMVDNGFAPNVFS 267
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--L 342
++T+ + K +VE A L ++ +R D V Y +++ + + +E RV + +
Sbjct: 268 YNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI 327
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKE 400
R P V + Y ++ R+GD++G ++ + + Y P N +M + +
Sbjct: 328 QRGCQPNV--ITYGTLVDGFCRVGDLDGAVELVRKM--TERGYRPNAITYNNIMHVFCRR 383
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ ++A +I+ G P++ ++ T+ G + ++ EA
Sbjct: 384 NDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREA 424
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 1/203 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++++ ++R +A LL D+MR G + Y++++ + K D M+
Sbjct: 509 DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML 568
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MKE DV +Y+ ++ G+ +K VF+ M + PN T++T+ K
Sbjct: 569 ERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEM-LGCGCAPNLVTYNTLIDGLCK 627
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+ +VE+A E L + + D + Y L++ + + EE +RV + +
Sbjct: 628 INKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMT 687
Query: 355 YHAMISSLARIGDIEGMEKIFEE 377
Y ++ +L + ++E +E++ +E
Sbjct: 688 YGTLLRALQKTNNLELVEQLLKE 710
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 6/271 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+A+ + +A L++ M +KGY + YN ++ ++ K E + ++S M
Sbjct: 1056 YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 1115
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF--ELMKVDKAVNPNWTTFSTMATMYIKMG 296
+KG +V SYN ++ G +T+ EGV E M + V P+ TF+T+ K
Sbjct: 1116 QKGCVPNVVSYNTVIA--GLCKATKVHEGVLLLEQMLSNNCV-PDIVTFNTIIDAMCKTY 1172
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLL-SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+V+ A E ++ + V Y+ L+ L S + Y + + R + Y
Sbjct: 1173 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +I L + ++ K+F + LS + D ++++S K D+A +++
Sbjct: 1233 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G P + ++ TL +G + + +AL L+
Sbjct: 1293 NGFDPGAITYGTLIDGFCKTGNLDKALEILQ 1323
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 36/298 (12%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG L++ + R A L+ KM ++GY +++ YN +M ++ + + + ++ M
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMI 397
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G D +Y+ +S G + + E M + + P+ ST+ K +
Sbjct: 398 QTGCPPDAINYSTIISGFCKAGKLREAHDLLEQM-IRRGCRPDVACLSTLIDALCKAAAI 456
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYG------------SVGKKEEVYRVWNLYRSV 346
+ A+E LR D V Y L+ V K Y Y SV
Sbjct: 457 DSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSV 516
Query: 347 FPGVTN-----------------------LGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
G+ + Y +I S + +++ K+ E K
Sbjct: 517 VDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKC 576
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D + +++ K G DKA F ++ G PN ++ TL +G + ++ +A
Sbjct: 577 VPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQA 634
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 5/268 (1%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF-LSLP 170
++ K + + A ++ + M RG R ++ I D + K + SA++ +S+
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLI--DALCKAAAIDSAQELLRMSIG 468
Query: 171 -DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D D Y L++A +A+ AE +D M + YN ++ K + ++
Sbjct: 469 MDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIND 528
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ M+ G+ DV +Y+I + S + + + E MK K V P+ T+S +
Sbjct: 529 AFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCV-PDVVTYSALI 587
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K G V+KA + + + + V Y+ L+ + K E+ + + R
Sbjct: 588 NGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCT 647
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEE 377
++ Y +I+ L +E ++ E
Sbjct: 648 PDSITYTCLINGLCNASRLEEAWRVLRE 675
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 106/255 (41%), Gaps = 4/255 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++ +A LL+++M + +N ++ K D + + ++
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E G ++ +YN + ++ E + M + +P+ T++T+ K +V
Sbjct: 1186 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 1245
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL-YRSVF-PGVTNLGYH 356
++A + ++ S D V Y ++S +E V L ++ F PG + Y
Sbjct: 1246 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGA--ITYG 1303
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I + G+++ +I + LS S D ++ + W K G +A +++
Sbjct: 1304 TLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA 1363
Query: 417 GGKPNSTSWETLAEG 431
G P++ ++ TL +G
Sbjct: 1364 GLVPDTVTYNTLLKG 1378
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 101/243 (41%), Gaps = 7/243 (2%)
Query: 247 YSYNIWLSSCGSQG--STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
Y+++ + +C Q ++ + ++ + +PN TF+ + + G + A E
Sbjct: 840 YNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYEL 899
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKE---EVYRVWNLYRSVFPGVTNLGYHAMISS 361
L+ + ++ + ++ ++ S K + E+++ S P V Y ++ S
Sbjct: 900 LKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDV--FTYSTIVDS 957
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L + G ++ ++ E+ +S S + + ++ K G D+A A + G PN
Sbjct: 958 LVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 1017
Query: 422 STSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKE 481
++ T+ +GH + RI EA L+ + V + F K + E +G E
Sbjct: 1018 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 1077
Query: 482 AFV 484
V
Sbjct: 1078 VMV 1080
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR G+L+N + R +A L+DKM + GY + YN ++ K K ++
Sbjct: 257 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 316
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
E++ KGIR +V +Y ++ C S ++ + +++K K + PN T+S + ++
Sbjct: 317 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK--KKITPNVITYSALLDAFV 374
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G+V +A+E + D V Y L++ + +E ++++L S +
Sbjct: 375 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 434
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ +I+ + +E K+F E + N ++ + + G+ DKA+ FF+ +
Sbjct: 435 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
G P+ ++ L G + +AL
Sbjct: 495 DFFGISPDIWTYNILLGGLCDNGELEKAL 523
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 128/274 (46%), Gaps = 13/274 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D YG ++N + RG+ +L L++KM L YN ++ K K D+
Sbjct: 834 DLVTYGVVVNGLCK---RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 890
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ EM+ KGIR +V +Y+ +S + G + M +++ +NP+ TFS +
Sbjct: 891 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDA 949
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPG 349
++K G++ +AE+ + R V Y L++ + + +E +++ S FP
Sbjct: 950 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009
Query: 350 VTNLGYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
V Y+ +I + + EGME +F E + N+++ + G+ D A+
Sbjct: 1010 VVT--YNTLIKGFCKYKRVEEGME-VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 1066
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F ++ +G PN ++ TL +G + ++ +A+
Sbjct: 1067 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 1100
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 125/266 (46%), Gaps = 9/266 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+LLN Y ++ A L+D+M GY +++ +N ++ + E +++ M K
Sbjct: 770 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 829
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G + D+ +Y + ++ +G T+ + M+ K + P ++T+ K ++
Sbjct: 830 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDD 888
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAM 358
A + +E++ + V Y L+S + G+ + R+ + + R + P V + A+
Sbjct: 889 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV--FTFSAL 946
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEE 416
I + + G + EK+++E VK S DP I +++ + D+A+ F ++ +
Sbjct: 947 IDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 1004
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
P+ ++ TL +G + +R+ E +
Sbjct: 1005 HCFPDVVTYNTLIKGFCKYKRVEEGM 1030
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 149/351 (42%), Gaps = 15/351 (4%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
++LN E+G ++ L K++ AL ++ M +G R +
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR-----PNVVTYSS 910
Query: 152 LIAKVHGVASAEDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
LI+ + D L D ++ D + AL++A+V+ AE L D+M +
Sbjct: 911 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 970
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKM 265
+ Y+ ++ + DE + M M K DV +YN + C + E M
Sbjct: 971 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 1030
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E VF M + + N T++ + + G + A+E + + S + + Y+ LL
Sbjct: 1031 E-VFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 1088
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
GK E+ V+ + T Y+ MI + + G +E +F LS+K
Sbjct: 1089 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVK 1147
Query: 386 DPRIA-NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+A N M+S + ++G+ ++A+A F + E+G PNS + TL +R+
Sbjct: 1148 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 1198
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 137/319 (42%), Gaps = 30/319 (9%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y L+N + +A+ + L +M +G +++ YN ++ + + + D+ +
Sbjct: 430 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 489
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
S+M GI D+++YNI L G EK +FE M+ + ++ + T++T+
Sbjct: 490 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ-KREMDLDIVTYTTVIRGM 548
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K G+VE+A + + D V Y ++S + G EV ++ T
Sbjct: 549 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY----------TK 598
Query: 353 LGYHAMISSLARI--GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ ++ + + GDI ++ ++ LS Y P + +K G KA +
Sbjct: 599 MKQEGLMKNDCTLSDGDITLSAELIKKMLSC--GYAPSLLK-----DIKSGVCKKALSLL 651
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA 470
+ GK + E L+ + E ++ +A+ A E KS RP P ++I F K
Sbjct: 652 RAF---SGKTSYDYREKLSRNGLSELKLDDAV-----ALFGEMVKS-RPFP-SIIEFSKL 701
Query: 471 CEEESDMGSKEAFVALLRQ 489
+ M + ++L Q
Sbjct: 702 LSAIAKMNKFDVVISLGEQ 720
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 101/241 (41%), Gaps = 2/241 (0%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F+ D Y L+ + + + + +M +G +++ YN+++ +
Sbjct: 1000 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 1059
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ D + + EM G+ ++ +YN L G EK VFE ++ K + P T+
Sbjct: 1060 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTY 1118
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ M K G+VE + + + D V Y+ ++S + G KEE ++ +
Sbjct: 1119 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 1178
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ Y+ +I + R GD E ++ +E S + D L+ + + +G DK
Sbjct: 1179 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM-LHDGRLDK 1237
Query: 406 A 406
+
Sbjct: 1238 S 1238
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 118/267 (44%), Gaps = 42/267 (15%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELM 272
+N +++ +K+K+YD V S+ +M+ GIR D+Y++NI ++ C + + + +++
Sbjct: 191 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 250
Query: 273 K-----------------------------VDKAV----NPNWTTFSTMATMYIKMGQVE 299
K VDK V P+ ++ + K +V
Sbjct: 251 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 310
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
A + + +E + + V Y L++ + + + R+ + + + + P V + Y A
Sbjct: 311 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV--ITYSA 368
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIE 415
++ + + G + +++FEE V+ S DP I +++ D+A F+ ++
Sbjct: 369 LLDAFVKNGKVLEAKELFEEM--VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 426
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
+G + S+ TL G + +R+ + +
Sbjct: 427 KGCLADVVSYNTLINGFCKAKRVEDGM 453
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/368 (18%), Positives = 150/368 (40%), Gaps = 32/368 (8%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL----IAKVHGVASAEDFFLSLPDTL 173
K +R + ++++ M+ RG + IQ + K S DFF PD
Sbjct: 445 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 504
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
Y LL A ++ + M+ + + + Y ++ K + +E S+
Sbjct: 505 ----TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 560
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE------LMKVDKAVNPNWTTFST 287
+ KG++ D+ +Y +S ++G ++E ++ LMK D ++ T S
Sbjct: 561 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLS- 619
Query: 288 MATMYIKMGQVEKAEESLRRVESRI-----------TGRDRVPYHYLLSLYG-SVGKKEE 335
A + KM A L+ ++S + +G+ Y LS G S K ++
Sbjct: 620 -AELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDD 678
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMS 395
++ P + + + ++S++A++ + + + E+ ++ ++ +++++
Sbjct: 679 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 738
Query: 396 WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
+ + A A +++ G +PN + +L G+ +RI EA++ + F
Sbjct: 739 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT---- 794
Query: 456 SWRPKPVN 463
++P V
Sbjct: 795 GYQPNTVT 802
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 122/271 (45%), Gaps = 5/271 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L+ A+ + + +++++MR++G YN ++ + K K +E + + EM
Sbjct: 462 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 521
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E+ +R + ++Y ++ G E + F M + V PN ++ + + K G
Sbjct: 522 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM-LSCGVLPNVGIYTALIEGHCKEGN 580
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGY 355
V +A R + SR +D Y L+ GK E + +++ + + P Y
Sbjct: 581 VTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA--FTY 638
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++IS + G+++ ++ EE + D N+++ K G ++A+ F+ I
Sbjct: 639 NSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEG 698
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G PN ++ + +G+ + + A L+
Sbjct: 699 RGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 729
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 121/273 (44%), Gaps = 6/273 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ +A A+ L D + +G + + Y M+ Y K K ++
Sbjct: 669 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLL 728
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM +G+ D + YN+ L+ C + EK +F+ M ++K + +F+T+ Y K
Sbjct: 729 EEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM-LEKGF-ASTVSFNTLIEGYCK 786
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW--NLYRSVFPGVTN 352
G++++A L + + + V Y L+ G E R+W R+V P T
Sbjct: 787 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMP--TA 844
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y +++ IG++ + +FEE ++ D +M+ Y +EGN +A +
Sbjct: 845 KTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDE 904
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
I+ +G + +++ L + ++ E L L
Sbjct: 905 ILVKGMPMSVAAYDALIQALCKKEEFFEVLKLL 937
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 119/269 (44%), Gaps = 11/269 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ++ RAR+ A L M DKG Y++++ + K E + M+ EM
Sbjct: 252 TYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEM 311
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G++ + +YN + QG E+ + + M V + N ++T+ K G+
Sbjct: 312 IDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM-VACGIEANLIIWNTLLNGVCKAGK 370
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTN 352
+EKA E ++ + + D Y L+ + + + + R + L R + P V
Sbjct: 371 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHC---RGQNMARAFELLDEMKKRKLAPTV-- 425
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
L Y +I+ L R G+++G I E + + + +M+ + KEG +++
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ E+G P+ + +L G + +R+ EA
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEA 514
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 163/406 (40%), Gaps = 65/406 (16%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L+D + Y L++ R A + ++++KG ++ YN +++ K D+
Sbjct: 596 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 655
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ EM KGI D+ +YNI + G E+ + +F+ ++ + + PN T++ M
Sbjct: 656 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE-GRGLTPNCVTYAAMVDG 714
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-- 349
Y K A + L + R D Y+ +L+ K+E+ + +L++ +
Sbjct: 715 YCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF---CCKEEKFEKALDLFQEMLEKGF 771
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWL---------SVKSSYDPRIANLMMS----- 395
+ + ++ +I + G ++ + EE + + S D MM
Sbjct: 772 ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 831
Query: 396 W---------------------YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
W Y GN + A F ++ +G +P+ ++ + + + R
Sbjct: 832 WLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCR 891
Query: 435 ERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR------ 488
E ++EA LK +G P++V + + + KE F +L+
Sbjct: 892 EGNVMEACK-LKDEILVKGM------PMSVAAYDALIQA---LCKKEEFFEVLKLLNEIG 941
Query: 489 QPGYRKEKDYMSLIGLTDEAVAENNKKNDEDSDEDSEMLLSQLQFA 534
+ G+R +GL +V + + DE +E+L S ++F
Sbjct: 942 ESGFR--------LGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 979
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 123/311 (39%), Gaps = 44/311 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N + + A+L++ +M D G + YN ++ +M+ + ++ +
Sbjct: 284 DLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIK 343
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMY 292
EM GI ++ +N L+ G KME E+M+ ++K V P+ T+S + +
Sbjct: 344 DEMVACGIEANLIIWNTLLNGVCKAG---KMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 400
Query: 293 IKMGQVEKAEESLRRVESR------------ITGRDR----------------------- 317
+ + +A E L ++ R I G R
Sbjct: 401 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 460
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
V Y L++ + G+ EE + R + P V Y+++I + +E
Sbjct: 461 VVYTTLMTAHAKEGRVEESRMILERMREQGILPDV--FCYNSLIIGFCKAKRMEEARTYL 518
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
E L + + + Y K G + A+ +FN ++ G PN + L EGH +E
Sbjct: 519 MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE 578
Query: 436 RRILEALSCLK 446
+ EA S +
Sbjct: 579 GNVTEAFSVFR 589
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 129/309 (41%), Gaps = 47/309 (15%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y +L+ + +A+ A + +M ++ ++ Y + Y K E + +
Sbjct: 492 LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 551
Query: 233 MVSEMKEKGI---------------------------------RL--DVYSYNIWLSSCG 257
+EM G+ R+ DV +Y++ +
Sbjct: 552 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLS 611
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G + G+F ++ +K + PN T++++ + K G V+KA + L + + D
Sbjct: 612 RNGKMHEAFGIFSELQ-EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDI 670
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSLARIGDIEGME 372
V Y+ L+ + K E+ R NL+ R + P Y AM+ + +
Sbjct: 671 VTYNILID---GLCKAGEIERAKNLFDDIEGRGLTPNCVT--YAAMVDGYCKSKNPTAAF 725
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
++ EE L D I N+++++ KE F+KA F ++E+ G ++ S+ TL EG+
Sbjct: 726 QLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK-GFASTVSFNTLIEGY 784
Query: 433 IRERRILEA 441
+ ++ EA
Sbjct: 785 CKSGKLQEA 793
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 44/268 (16%)
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLP----YNVMMTLYMKIKEYDEVESMVSEMKE 239
N+ + ++GN L K+ D A LP Y M++ + K+ + + ++ EM E
Sbjct: 184 NSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGE 243
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQ 297
KG ++ +YN+ + G ++ EL + VDK + P+ T+ + +
Sbjct: 244 KGCSPNLVTYNVII---GGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC---- 296
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+EK R R LL + VG K E + Y+A
Sbjct: 297 MEK--------------RSREAKLMLLEMI-DVGLKPE----------------PITYNA 325
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I R GDIE +I +E ++ + I N +++ K G +KA ++E+G
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCL 445
+P+S ++ L EGH R + + A L
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELL 413
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 139/329 (42%), Gaps = 53/329 (16%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDK 201
I +D + K + A++ F D ++ R + Y A+++ Y +++ A L+++
Sbjct: 675 ILIDGLCKAGEIERAKNLF----DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 730
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
M +G + YNV++ K +++++ + EM EKG V S+N + G
Sbjct: 731 MLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGK 789
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
++ + E M ++K PN T++++ K G + +A+ ++ R Y
Sbjct: 790 LQEANHLLEEM-IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYT 848
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
LL Y ++G EV ++ + + + P + Y+ MI + R G++ K+ +E L
Sbjct: 849 SLLHGYHNIGNMSEVSALFEEMVAKGIEP--DKMTYYVMIDAYCREGNVMEACKLKDEIL 906
Query: 380 SVK------SSYDPRI------------------------------ANLMMSWYVKEGNF 403
VK ++YD I +++ + GN
Sbjct: 907 -VKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNM 965
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
D+A S+++ G N+TS L +G+
Sbjct: 966 DEAAEVLRSMVKFGWVSNTTSLGDLVDGN 994
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 3/266 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMR-DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
VY A++ + R G LI++MR + Y + + V+M + ++ + ++ E
Sbjct: 166 VYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDE 225
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M + G D Y + L + GS ++ +FE M+V NPN F+++ + + G
Sbjct: 226 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRV--RFNPNLRHFTSLLYGWCREG 283
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++ +A+ L +++ D V Y+ LL Y GK + + + + V G +
Sbjct: 284 KIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFT 343
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I S + ++ +IF E D ++S + K GN DKA + +I++
Sbjct: 344 ILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQK 403
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G P+ S+ + H ++ + E +
Sbjct: 404 GHDPSQLSYLCIMMAHEKKEELEECM 429
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 146/338 (43%), Gaps = 27/338 (7%)
Query: 116 LRKF---RRYKHALEVYDWMNNRGERFRLSASDAAI---QLDLIAKVHGVASAEDFFLSL 169
+R+F R K A+EV D M G D + LD + K V A F +
Sbjct: 207 MRRFASVRMVKKAVEVLDEMPKYG-----CEPDEYVFGCLLDALCKNGSVKEAASLFEDM 261
Query: 170 PDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+ R + +LL + R A+ ++ ++++ G+ + YN ++ Y + +
Sbjct: 262 RVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMR 321
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
+ +++EMK+ + S+ I + S C ++ E M +F M+ + T++T
Sbjct: 322 DAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMR-IFTEMQ-GSGCEADVVTYTT 379
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV- 346
+ + + K G +KA E L + + G D YL + KKEE+ L +
Sbjct: 380 LISGFCKWGNTDKAYEILDDMIQK--GHDPSQLSYLCIMMAH-EKKEELEECMELIEEMR 436
Query: 347 -FPGVTNLG-YHAMISSLARIGDIEGMEKIFEEWLS--VKSSYDPRIANLMMSWYVKEGN 402
V +L Y+ MI + ++GD++ +++ E + + D I LM+ ++ +G
Sbjct: 437 KIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYI--LMVHGFLSQGC 494
Query: 403 FDKAEAFFNSIIEEG--GKPNSTSWETLAEGHIRERRI 438
+A +F ++E G P + + L +R ++
Sbjct: 495 LVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKL 532
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 120/258 (46%), Gaps = 3/258 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR G+L+N + R +A L+DKM + GY + YN ++ K K ++
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
E++ KGIR +V +Y ++ C S ++ + +++K K + PN T+S + ++
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK--KKITPNVITYSALLDAFV 271
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G+V +A+E + D V Y L++ + +E ++++L S +
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ +I+ + +E K+F E + N ++ + + G+ DKA+ FF+ +
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 414 IEEGGKPNSTSWETLAEG 431
G P+ ++ L G
Sbjct: 392 DFFGISPDIWTYNILLGG 409
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y L+N + +A+ + L +M +G +++ YN ++ + + + D+ +
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
S+M GI D+++YNI L G EK +FE M+ + ++ + T++T+
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ-KREMDLDIVTYTTVIRG 444
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
K G+VE+A + + D V Y ++S + G EV ++
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFE 270
+ +N +++ +K+K+YD V S+ +M+ GIR D+Y++NI ++ C + + + +
Sbjct: 86 VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGK 145
Query: 271 LMK-----------------------------VDKAV----NPNWTTFSTMATMYIKMGQ 297
++K VDK V P+ ++ + K +
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
V A + + +E + + V Y L++ + + + R+ + + + + P V + Y
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV--ITY 263
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSI 413
A++ + + G + +++FEE V+ S DP I +++ D+A F+ +
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEM--VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 414 IEEGGKPNSTSWETLAEGHIRERRI 438
+ +G + S+ TL G + +R+
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRV 346
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 118/246 (47%), Gaps = 5/246 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L +M +G YN ++ K + D ++SEM K I +V +Y+ +
Sbjct: 199 LFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYA 258
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G ++ +F MK ++ + +++T+ ++Y K+G+ E+A + +ES +D
Sbjct: 259 KAGRLDEALNLFNEMKF-ASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDA 317
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
V Y+ LL YG GK EEV RV+ ++ +FP + L Y +I ++ G + ++F
Sbjct: 318 VTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNL--LTYSTLIDVYSKGGLYQEAMEVF 375
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
E+ D + + ++ K G + A +F + + +EG +PN ++ ++ + R
Sbjct: 376 REFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRS 435
Query: 436 RRILEA 441
+ +A
Sbjct: 436 GIVEDA 441
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ Y +A A L ++M+ + + YN ++++Y K+ ++E ++ EM
Sbjct: 249 TYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEM 308
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ GI+ D +YN L G QG E+++ VFE MK ++ + PN T+ST+ +Y K G
Sbjct: 309 ESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAER-IFPNLLTYSTLIDVYSKGGL 367
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
++A E R + D V Y L+ G E + + P V Y
Sbjct: 368 YQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVT--Y 425
Query: 356 HAMISSLARIGDIE 369
+++I + R G +E
Sbjct: 426 NSIIDAFGRSGIVE 439
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 103/225 (45%), Gaps = 9/225 (4%)
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKG---IRLDVYSYNIWLSSCGSQG-STEKMEGVFE 270
+V++ ++ D+ ++ E+ +G ++ ++ +YN + +CG G + +F+
Sbjct: 136 SVLLNFESRLCGSDDYTFLLRELGNRGDSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFD 195
Query: 271 LMKVD-----KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
M + + + + T++T+ K GQ++ A + + + + + V Y ++
Sbjct: 196 EMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVID 255
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
Y G+ +E ++N + G+ + Y+ ++S A++G E + +E S
Sbjct: 256 GYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKK 315
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
D N ++ Y K+G +++ + F + E PN ++ TL +
Sbjct: 316 DAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLID 360
>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 149/326 (45%), Gaps = 14/326 (4%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRG-ERFRLSASDAAIQ--LDLIAKVHGVASAEDFFL 167
+V+K L + +Y A++ + RG E+F LS S A+ +D++A+ V A L
Sbjct: 211 KVMKRLVRDGKYNEAIDAF-----RGLEKFGLSKSTEAMNVLMDILARNGRVEDARAVAL 265
Query: 168 SLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
L D R Y L + Y +ARM G+A +++M ++G+ + + Y + Y + K+
Sbjct: 266 EFEGCLTLDYRSYNILSSGYCKARMFGDARKTMEEMEERGFHPNVVSYTAFIEAYGEQKD 325
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+ VE +++EM+EKG D+ +Y +++ + G K + E +K + V S
Sbjct: 326 FRNVEIILNEMQEKGCPPDLITYTVYIRALGKARQINKALEICEEIKRNGFVLGTQFYCS 385
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR-- 344
+ ++ + G+++ A VE + GRD Y ++S ++ + E ++ +
Sbjct: 386 LIHSLCLS-GRLKDAWNIFEDVEKQGVGRDLGMYKAMISAACALSQDESALKLLHKMEED 444
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S P V Y ++ R ++ ++ + S D +L++ K+G
Sbjct: 445 SCKPDVQT--YAPLLKMCCRKKSMKMLKFLLNHMFENDVSIDIVTYDLLVHGLRKQGKLK 502
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAE 430
A FF + +G P +++ L E
Sbjct: 503 YACFFFQEAVLKGMVPCDKTYKILLE 528
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 124/268 (46%), Gaps = 5/268 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ Y +A A+ L+ +M K + + +N+++ + + + + + EM
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEM 325
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +G++ +V +YN ++ S G ++ G+ + M + PN T++ + + K
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS-GMGLKPNVVTYNALINGFCKKKM 384
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY--RVWNLYRSVFPGVTNLGY 355
+++A E L + R + + ++ L+ YG G+ ++ + R L V P V+ Y
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST--Y 442
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +I R G+++ K+ +E D N+++ K+G KA + + E
Sbjct: 443 NCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFE 502
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
G P+ ++ L +G+ RE AL+
Sbjct: 503 VGLNPSHLTYNALIDGYFREGNSTAALN 530
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 9/255 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +L+N A L DKM G + + YN ++ + K K E M+ ++
Sbjct: 336 TYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDI 395
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL--MKVDKAVNPNWTTFSTMATMYIKM 295
++G+ +V ++N + + G G +M+ F L M +D V PN +T++ + + +
Sbjct: 396 GKRGLAPNVITFNTLIDAYGKAG---RMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G V++A + + +E D V Y+ L+ G+ + R+ + V ++L Y
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTY 512
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSI 413
+A+I R G+ + L K I N+++ + +G ++A N +
Sbjct: 513 NALIDGYFREGNSTAALNV--RTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 570
Query: 414 IEEGGKPNSTSWETL 428
+E+G PN T+++ L
Sbjct: 571 LEKGLIPNRTTYDIL 585
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 16/264 (6%)
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+S+ ++++ Y+K E D + G RL S N L S +G +E
Sbjct: 156 CANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVES 215
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
V++ M + + + N TF + K+G+ +KA + + +++ + Y+ ++ Y
Sbjct: 216 VYKEM-IRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGY 274
Query: 328 GSVGK--KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
GK K + + + + P + ++ +I R ++ +K+FEE +
Sbjct: 275 CKAGKMFKADALLKEMVAKRIHP--NEITFNILIDGFCRDENVTAAKKVFEEM--QRQGL 330
Query: 386 DPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
P + N +++ G D+A + + G KPN ++ L G +++ + EA
Sbjct: 331 QPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEARE 390
Query: 444 CLKGAFAAEGAKSWRPKPVNVINF 467
L G + P NVI F
Sbjct: 391 MLDDI----GKRGLAP---NVITF 407
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++A + A L+D+M + G L YN ++ Y + ++
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVR 532
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M++KG R ++ +YN+ + ++G E+ + M ++K + PN TT+ + ++
Sbjct: 533 TLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM-LEKGLIPNRTTYDILRDEMME 591
Query: 295 MGQVEKAEESLRRV 308
G + + L V
Sbjct: 592 KGFIPDIDGHLYNV 605
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 121/250 (48%), Gaps = 5/250 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
++ Y L+ + G A ++ +M GY ++ YN+++ +++ +E ++
Sbjct: 382 NKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLL 441
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM++ GI +VY+Y+I ++ G +E+ G+ E M D + PN ++ + + Y +
Sbjct: 442 NEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIAD-GLKPNAFVYAPLISGYCR 500
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G A E+L+++ D Y+ L+ +VGK +E ++ L + P +
Sbjct: 501 EGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQP--ND 558
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y +I + G++E E++ + L+ + + I ++ Y K N +K + S
Sbjct: 559 FTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKS 618
Query: 413 IIEEGGKPNS 422
++E+G P++
Sbjct: 619 MLEKGLMPDN 628
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 119/277 (42%), Gaps = 6/277 (2%)
Query: 169 LPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
+ D LK + VY L++ Y R A + KM + YN ++ + +
Sbjct: 480 IADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKM 539
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
DE EM EKG + + ++Y + G+ EK E + M ++ +NPN ++
Sbjct: 540 DEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM-LNSGLNPNDFIYAQ 598
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+ Y K +EK +L+ + + D Y ++ S G + V ++
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNG 658
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDK 405
+L Y ++IS + D+E + +E K +P I+ N ++ + K +
Sbjct: 659 LVPDSLIYGSLISGFCKAADMEKAVGLLDEM--AKKGIEPGISCYNALIDGFCKSDDISH 716
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
A FNSII +G PN ++ TL +G+ + I +A+
Sbjct: 717 ARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAI 753
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 120/272 (44%), Gaps = 1/272 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ AY + R +A+ ++++MR+ G +++ + YN ++ + +E
Sbjct: 242 DVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYK 301
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM++ G+ D ++Y ++ +G ++ + + + M + PN +ST+ +++
Sbjct: 302 KEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSC-AGLMPNVVVYSTLIDGFMR 360
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G ++A + ++ + + +++ Y L+ +G+ R+ + +
Sbjct: 361 QGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMT 420
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +I R + E + E S + +++++ + G ++A +I
Sbjct: 421 YNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMI 480
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+G KPN+ + L G+ RE A LK
Sbjct: 481 ADGLKPNAFVYAPLISGYCREGSFSLACETLK 512
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 105/265 (39%), Gaps = 36/265 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG L++ Y A AE L+ +M + G + Y ++ Y K ++V S + M
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
EKG+ D Y I + + S G + V +++ + V P+ + ++ + + K
Sbjct: 620 LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLV-PDSLIYGSLISGFCKAAD 678
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+EKA VG +E+ + + + PG++ Y+A
Sbjct: 679 MEKA----------------------------VGLLDEMAK-----KGIEPGISC--YNA 703
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I + DI IF + + ++ Y K G+ A +N ++ EG
Sbjct: 704 LIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEG 763
Query: 418 GKPNSTSWETLAEGHIRERRILEAL 442
P++ + LA G + +AL
Sbjct: 764 VAPDAFVYSVLAAGCSNSGDLQQAL 788
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 10/190 (5%)
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE---GME 372
D Y L+ Y V E +V R + + Y+ +I L R G IE G +
Sbjct: 242 DVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYK 301
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
K E++ V + +++ K G D+A+ + + G PN + TL +G
Sbjct: 302 KEMEDYGLVPDGF---TYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358
Query: 433 IRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
+R+ EA +K AA +P + N + + MG + + + GY
Sbjct: 359 MRQGNADEAFKIVKEMSAA----GVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGY 414
Query: 493 RKEKDYMSLI 502
+ +L+
Sbjct: 415 MADTMTYNLV 424
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 130/269 (48%), Gaps = 8/269 (2%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
S+ D D Y L+ + R E ++ +M G + + YN ++ Y K +
Sbjct: 187 SVVDCEPDVYTYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDGYGKASMF 246
Query: 228 DEVESMVSEMKEKG-IRLDVYSYNIWLSSCGSQGSTEKME---GVFELMKVDKAVNPNWT 283
++++ +++M E G DV++ N ++ + G+ G +KME F+LM + P+ T
Sbjct: 247 EQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLM----GIKPDIT 302
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
TF+TM Y K G EK + + +E R V Y+ ++ ++G G+ E++ + +
Sbjct: 303 TFNTMIKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFLKM 362
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+ + ++ Y +++S+ +++G I+ ++ I + D N ++S Y + GN
Sbjct: 363 KHLGVKPNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNL 422
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
K F ++ E +P++ ++ + + +
Sbjct: 423 KKMGELFLAMRERKCEPDNITFACMIQSY 451
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 113/261 (43%), Gaps = 22/261 (8%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP----YNVMMTLYMKIKEYDEVESM 233
VY AL++AY ++ + A ++ M+ V P Y++++ K + +D +E +
Sbjct: 161 VYTALVSAYGQSGLLDQAFSTVEDMKS---VVDCEPDVYTYSILIRCCAKFRRFDLIEHV 217
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
++EM GI+ + +YN + G E+M+ M + +P+ T ++ Y
Sbjct: 218 LAEMSYLGIKCNCVTYNSIIDGYGKASMFEQMDDALNDMIENGNSHPDVFTLNSFVGAYG 277
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
GQ++K E+ + D ++ ++ YG G E++ V + F T +
Sbjct: 278 NAGQIDKMEKWYDEFQLMGIKPDITTFNTMIKSYGKAGMYEKMKTVMDFMEKRFFTPTIV 337
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA----- 408
Y+ +I + G+IE M++ F + + + ++S Y K G DK ++
Sbjct: 338 TYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPNSITYCSLVSAYSKVGCIDKVDSIMRHV 397
Query: 409 ----------FFNSIIEEGGK 419
FFN II G+
Sbjct: 398 ENSDVVLDTPFFNCIISAYGQ 418
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 29/294 (9%)
Query: 109 LCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLS 168
L R + R+F +H L E L + + I +G AS F
Sbjct: 201 LIRCCAKFRRFDLIEHVL---------AEMSYLGIKCNCVTYNSIIDGYGKAS---MFEQ 248
Query: 169 LPDTLKDRRVYGA------LLNAYVRARMRGNAELLIDKMRD-------KGYAVHSLPYN 215
+ D L D G LN++V A GNA IDKM G +N
Sbjct: 249 MDDALNDMIENGNSHPDVFTLNSFVGAY--GNAGQ-IDKMEKWYDEFQLMGIKPDITTFN 305
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
M+ Y K Y+++++++ M+++ + +YN + G G EKM+ F MK
Sbjct: 306 TMIKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFLKMK-H 364
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
V PN T+ ++ + Y K+G ++K + +R VE+ D ++ ++S YG G ++
Sbjct: 365 LGVKPNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNLKK 424
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+ ++ R N+ + MI S G E ++ + +S KSS ++
Sbjct: 425 MGELFLAMRERKCEPDNITFACMIQSYNTQGMTEAVQNLENMMISAKSSLGTKL 478
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 122/260 (46%), Gaps = 7/260 (2%)
Query: 179 YGALLNAYVR-ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+N + + R+ AE+ ++ M KG +++++ YN ++ K +E + EM
Sbjct: 415 YTILINGFCKQGRLEEAAEI-VNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEM 473
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG + D+Y++N ++ E+ ++ M ++ + N T++T+ ++
Sbjct: 474 SGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVI-ANTVTYNTLVHAFLMRDS 532
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+++A + + + R D + Y+ L+ G E+ ++ L + +FP T +
Sbjct: 533 IQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFP--TIISC 590
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +IS L R G + K ++ + + D N +++ K G+ +A FN +
Sbjct: 591 NILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQS 650
Query: 416 EGGKPNSTSWETLAEGHIRE 435
EG +P++ ++ TL H E
Sbjct: 651 EGIRPDAITYNTLISRHCHE 670
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 124/280 (44%), Gaps = 6/280 (2%)
Query: 163 EDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
ED FL + D + + +++ RA A L+D+M +G++ +L Y +M
Sbjct: 264 EDMFLMCCE--PDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLC 321
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
++ + DE ++++++ L YN +S + G E+ + + V P+
Sbjct: 322 RMGQVDEARALLNKIPNPNTVL----YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDA 377
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
TF+ M +K G + A E L + ++ + + Y L++ + G+ EE + N
Sbjct: 378 YTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNS 437
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ + +GY+ +I +L + G+IE ++F E D N +++ K
Sbjct: 438 MSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHK 497
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++A + ++ + EG N+ ++ TL + I +A
Sbjct: 498 MEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAF 537
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 118/310 (38%), Gaps = 40/310 (12%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRV 178
R + A E+ + M+ +G + I + K + A F +S D
Sbjct: 427 RLEEAAEIVNSMSAKGLSLNTVGYNCLICA--LCKDGNIEEALQLFGEMSGKGCKPDIYT 484
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ +L+N + A L M +G +++ YN ++ ++ + +V EM
Sbjct: 485 FNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEML 544
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+G LD +YN + + G+ EK G+FE M + K + P + + + + + G+V
Sbjct: 545 FRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEM-LGKGIFPTIISCNILISGLCRTGKV 603
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
A + L+ + R D V Y +++
Sbjct: 604 NDALKFLQDMIHRGLTPDIVTY-----------------------------------NSL 628
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I+ L ++G ++ +F + S D N ++S + EG F+ A ++ G
Sbjct: 629 INGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGF 688
Query: 419 KPNSTSWETL 428
PN +W L
Sbjct: 689 IPNEVTWSIL 698
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 142/315 (45%), Gaps = 22/315 (6%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV------ 178
AL+ + +++N + AS + +D+ A++H + SL ++ R+
Sbjct: 67 ALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTV----WSLIHRMRSLRIGPSPKT 122
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ + Y A A L M + G +N ++ + K K ++ + ++
Sbjct: 123 FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 182
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +D +YN+ L+ C + + + +E + E+ V++ +NPN TT++TM + + GQ
Sbjct: 183 GR-FSVDTVTYNVILNGWCLIKRTPKTLEVLKEM--VERGINPNLTTYNTMLKGFFRAGQ 239
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+ A E ++ R D V Y ++ +G G+ + V++ + V P V Y
Sbjct: 240 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT--Y 297
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSI 413
+AMI L + ++E +FEE V+ Y+P + N+++ G F + E +
Sbjct: 298 NAMIQVLCKKDNVENAVVMFEEM--VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 355
Query: 414 IEEGGKPNSTSWETL 428
EG +PN ++ +
Sbjct: 356 ENEGCEPNFQTYNMM 370
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 96/251 (38%), Gaps = 41/251 (16%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
LD++ K V A + F +L D Y +LN + + ++ +M ++G
Sbjct: 162 LDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGIN 221
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ YN M+ + + + EMK++ +DV +Y + G G ++ V
Sbjct: 222 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 281
Query: 269 FELM-----------------------KVDKAV-----------NPNWTTFSTMATMYIK 294
F+ M V+ AV PN TT++ +
Sbjct: 282 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 341
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG--VTN 352
G+ + EE ++R+E+ + Y+ ++ Y EV + L+ + G + N
Sbjct: 342 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECS---EVEKALGLFEKMGSGDCLPN 398
Query: 353 L-GYHAMISSL 362
L Y+ +IS +
Sbjct: 399 LDTYNILISGM 409
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A++ + NA ++ ++M +GY + YNV++ E+ E ++ M
Sbjct: 296 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 355
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT-MYIK 294
+ +G + +YN+ + EK G+FE M + PN T++ + + M+++
Sbjct: 356 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL-PNLDTYNILISGMFVR 412
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 123/324 (37%), Gaps = 39/324 (12%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
+ +D K V A FF + L D Y +++ + A + ++M
Sbjct: 273 VCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQN 332
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ YN M+ Y ++DE S++ K +G V +YN L+ G +G +
Sbjct: 333 RNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEA 392
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA------------------------ 301
FE MK D A PN +T++ + M K G+VE A
Sbjct: 393 LRTFEEMKKDAA--PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMID 450
Query: 302 --------EESLRRVES---RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
+E+ E +I D V + L+ G G+ ++ YR++
Sbjct: 451 RLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIP 510
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y ++I S + G E KIF+E + S D R+ N M K G K A F
Sbjct: 511 NAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALF 570
Query: 411 NSIIEEGGKPNSTSWETLAEGHIR 434
I G P+ S+ L G ++
Sbjct: 571 EEIKSRGFIPDVMSYSILIHGLVK 594
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 152/353 (43%), Gaps = 16/353 (4%)
Query: 109 LCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLS 168
C ++ L K R A +Y+ M + + +A + LI ED
Sbjct: 480 FCSLIDGLGKQGRVDDAYRLYEQMLDSDK-----IPNAVVYTSLIKSFFKCGRKEDGHKI 534
Query: 169 LPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
+ + D R+ A ++ +A G L ++++ +G+ + Y++++ +K
Sbjct: 535 FKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVK 594
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
E + MKE+G LD ++YN ++ G K + E MK K P
Sbjct: 595 AGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKT-KGRQPTVV 653
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-- 341
T+ ++ K+ ++++A +S + V Y L+ +G VG+ +E Y +
Sbjct: 654 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 713
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ + + P V ++ ++ +L + +I F+ ++K + + +++++ +
Sbjct: 714 MQKGLTPNVYT--WNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVR 771
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGA 454
F+KA F+ + ++G KPN+ ++ T+ G + I EA S L F A G
Sbjct: 772 KFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEA-SSLFERFKANGG 823
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 115/254 (45%), Gaps = 10/254 (3%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L +M++ GY V + ++ ++ + D S++ EMK + D+ YN+ + G
Sbjct: 220 LFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFG 279
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G + F +K + P+ T+++M + K ++++A E ++E
Sbjct: 280 KAGKVDMAWKFFHEIK-SHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCA 338
Query: 318 VPYHYLLSLYGSVGKKEEVYRVW--NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
Y+ ++ YGS GK +E Y + R P V + Y+ +++ L + G + + F
Sbjct: 339 YAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSV--IAYNCILTCLGKKGRLGEALRTF 396
Query: 376 EEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
EE +K P ++ N+++ K G + A +++ E G PN + + +
Sbjct: 397 EE---MKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLC 453
Query: 434 RERRILEALSCLKG 447
+ +++ EA S +G
Sbjct: 454 KAKKLDEACSIFEG 467
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 127/301 (42%), Gaps = 3/301 (0%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDTL--KDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
I +D + K + A F + + D + +L++ + +A L ++M D
Sbjct: 447 IMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDS 506
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+++ Y ++ + K ++ + EM +G D+ N ++ G T K
Sbjct: 507 DKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKG 566
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+FE +K + P+ ++S + +K G + E ++ + D Y+ +
Sbjct: 567 RALFEEIK-SRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFID 625
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+ GK + Y++ ++ T + Y ++I LA+I ++ +FEE S
Sbjct: 626 GFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLEL 685
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ I + ++ + K G D+A ++++G PN +W L + ++ I EAL C
Sbjct: 686 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCF 745
Query: 446 K 446
+
Sbjct: 746 Q 746
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 114/265 (43%), Gaps = 4/265 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
++ ++ + R A L+D+M+ + YNV + + K + D E+
Sbjct: 235 LFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEI 294
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K G+ D +Y + ++ +FE M+ ++ V P ++TM Y G+
Sbjct: 295 KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNV-PCAYAYNTMIMGYGSAGK 353
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFPGVTNLGYH 356
++A L R ++R + Y+ +L+ G G+ E R + + + P ++ Y+
Sbjct: 354 FDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLST--YN 411
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I L + G++E K+ + + N+M+ K D+A + F + +
Sbjct: 412 VLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK 471
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
P+ ++ +L +G ++ R+ +A
Sbjct: 472 ICSPDEVTFCSLIDGLGKQGRVDDA 496
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/197 (17%), Positives = 79/197 (40%), Gaps = 34/197 (17%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG++++ + A +L ++ + G ++ + Y+ ++ + K+ DE ++ E+
Sbjct: 654 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 713
Query: 238 KEKGIRLDVYSYNIWLSS------------CGSQGSTEK-----------MEGVFELMKV 274
+KG+ +VY++N L + C K + G+ + K
Sbjct: 714 MQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKF 773
Query: 275 DKA-----------VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+KA + PN T++TM K G + +A R ++ D Y+ +
Sbjct: 774 NKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAI 833
Query: 324 LSLYGSVGKKEEVYRVW 340
+ + E Y+++
Sbjct: 834 IEGLSYSRRAMEAYKIF 850
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 132/288 (45%), Gaps = 4/288 (1%)
Query: 157 HG-VASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
HG + A D F +++ D Y +LN Y + L + M G A S
Sbjct: 334 HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI 393
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+NV++ Y K D + +EM+E+G+ DV +Y+ +++ G + F M
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQM- 452
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+D+ V P+ +T+ + + G + KA++ + ++ ++ D ++++++ +G+
Sbjct: 453 IDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRV 512
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+ +++ S+ + Y+ ++ +G +E ++F+ +S + + +
Sbjct: 513 MDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTL 572
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++ Y K G D+ + F I+ +G KP++T + + G + R + A
Sbjct: 573 VNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPA 620
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 158/412 (38%), Gaps = 73/412 (17%)
Query: 107 WELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF 166
+ C V+K L R+ A E+ M G +A +D K V A D F
Sbjct: 180 FSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLF 239
Query: 167 LSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
+ D Y ++NA +AR AE ++ +M DKG + YN ++ Y
Sbjct: 240 NEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSST 299
Query: 225 KEYDEVESMVSEMKEKGI-----------------------------------RLDVYSY 249
++ E + +M +GI + D++SY
Sbjct: 300 GQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSY 359
Query: 250 NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
I L+ ++G + +F LM D + P+ F+ + Y K G +++A +
Sbjct: 360 KIMLNGYATKGCLVDLTELFNLMLSD-GIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMR 418
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVT---------------- 351
+ D V Y +++ +GK ++ +N + + V P ++
Sbjct: 419 EQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLL 478
Query: 352 ----------------NLG-YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
++G ++ +I++L ++G + + IF+ +S+ + + N +M
Sbjct: 479 KAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLM 538
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
Y G + A F+ ++ G +PN + TL G+ + RI E LS +
Sbjct: 539 DGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFR 590
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 138/308 (44%), Gaps = 5/308 (1%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF-LSLP 170
++ L K + K A +V+D M +G++ + + I L+ A + + F L L
Sbjct: 327 LMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYK--IMLNGYATKGCLVDLTELFNLMLS 384
Query: 171 DTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D + D ++ L+ AY + M A ++ ++MR++G + Y+ ++ +I + D+
Sbjct: 385 DGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDD 444
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++M ++G+ + +Y+ + + G K + + L ++K + P+ F+ +
Sbjct: 445 AVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLV-LQMMNKGMRPDIGCFNFII 503
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K+G+V A+ S + + Y+ L+ Y VGK E RV+++ S
Sbjct: 504 NNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQ 563
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y +++ ++G I+ +F E L + N+++ + G A+
Sbjct: 564 PNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVK 623
Query: 410 FNSIIEEG 417
F+ + E G
Sbjct: 624 FHEMTESG 631
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 124/319 (38%), Gaps = 53/319 (16%)
Query: 132 MNNRGERFRLSASDAAIQ-LDLIAKVHGVASAEDFFLSL---PDTLKDRRVYGALLNAYV 187
M N+G R + + I L + +V + DF +S+ P+ + VY L++ Y
Sbjct: 487 MMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVM----VYNTLMDGYC 542
Query: 188 RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY 247
NA + D M G + + Y ++ Y K+ DE S+ E+ KGI+
Sbjct: 543 LVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTT 602
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
YNI L G T P F M I M
Sbjct: 603 LYNIILHGLFQAGRTV----------------PAKVKFHEMTESGIAM------------ 634
Query: 308 VESRITGRDRVPYHYLLS-LYGSVGKKEEVYRVWNLYR-SVFPGVTNLGYHAMISSLARI 365
DR Y +L L+ + E + L+ +V +T L + MI+ + +I
Sbjct: 635 --------DRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTL--NIMIAGMFQI 684
Query: 366 GDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGG-KPNS 422
+E + +F +S P + ++MM+ +KEG ++A+ F+S+ G +PNS
Sbjct: 685 RRVEEAKDLFASI--SRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNS 742
Query: 423 TSWETLAEGHIRERRILEA 441
+ + +R I+ A
Sbjct: 743 QLLNHVVRELLEKREIVRA 761
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 68/164 (41%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR Y +L + A LL ++ + N+M+ +I+ +E + +
Sbjct: 635 DRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLF 694
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ + G+ V +Y+I +++ +G E+ + +F M+ PN + + ++
Sbjct: 695 ASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLE 754
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
++ +A L +++ R D L+ L+ S G E R
Sbjct: 755 KREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKGTCREHIR 798
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 1/267 (0%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y L+ A + + A L ++M++KG + Y V++ K + DE M+SE
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M EKG+ V +YN + +G + + +LM+ + PN T++ + K
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME-SNSCGPNTRTYNELICGLCKKR 418
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+V KA L ++ R + Y+ L+ V E YR+ +L Y
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
I +L + G +E +F+ + + I ++ Y K G D A + ++ +
Sbjct: 479 VFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND 538
Query: 417 GGKPNSTSWETLAEGHIRERRILEALS 443
PNS ++ L EG +E+++ EA S
Sbjct: 539 ACLPNSYTYNVLIEGLCKEKKMKEASS 565
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 13/296 (4%)
Query: 158 GVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
GV +A + FL +P ++ Y L++ A A L M + Y
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
V++ E ++ +EMKEKG +V++Y + + + ++ + M +
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS-E 362
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
K + P+ T++ + Y K G ++ A E L +ES G + Y+ L+ + KK +
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC---GLCKKRK 419
Query: 336 VYRVWNLY-----RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
V++ L R + P + + Y+++I ++ D+E ++ D
Sbjct: 420 VHKAMALLNKMLERKLSPSL--ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++ + KEG ++A F+S+ +G K N + L +G+ + +I A S L+
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE 533
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 114/261 (43%), Gaps = 9/261 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y AL++ Y + M +A ++D M ++ YN ++ K ++ + +++++M
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--DKAVNPNWTTFSTMATMYIKMG 296
E+ + + +YN S Q +E + L+ + + + P+ T+S K G
Sbjct: 432 ERKLSPSLITYN---SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
+VE+A V+++ + V Y L+ Y VGK + Y + L + P +
Sbjct: 489 RVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP--NSYT 546
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +I L + ++ + + L++ +++ +K+G FD A FN ++
Sbjct: 547 YNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV 606
Query: 415 EEGGKPNSTSWETLAEGHIRE 435
G +P+ ++ + +
Sbjct: 607 SLGYQPDVCTYTAFLHAYFSQ 627
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 115/274 (41%), Gaps = 25/274 (9%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y AL++ Y + A L+++M + +S YNV++ K K+ E S+V++M
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G++ V +Y I + G+ + VF M V P+ T++ Y G
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM-VSLGYQPDVCTYTAFLHAYFSQGM 629
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-------- 349
+E+ ++ + ++ D V Y L+ Y +G +R ++ + +
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL---THRAFDFLKCMVDTGCKPSLYI 686
Query: 350 ----VTNLGY---------HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
+ NL + I S++ + E K+FE+ + + D I +++
Sbjct: 687 VSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAG 746
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+ ++ ++A+ + + E G P+ + +L +
Sbjct: 747 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 780
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 17/265 (6%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++LN +RAR+ G AE + M ++ +V+ L EV ++
Sbjct: 104 YSSMLNILIRARLLGVAEKIRISMIKSCCSIE----DVLFVL--------EVFRKMNADG 151
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E + + YN L S ++M+ V+ L ++ ++PN TF+ M Y K+G V
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVY-LELLNNQISPNIYTFNAMVNGYCKIGNV 210
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+AE ++ D Y L+ + + Y V+ + + Y +
Sbjct: 211 VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNL 270
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA--FFNSIIEE 416
I L G I K+F + + + P + + Y G+ K EA FN + E+
Sbjct: 271 IHGLCEAGRINEALKLFADM--TEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK 328
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
G +PN ++ L +G +E ++ EA
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEA 353
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 110/277 (39%), Gaps = 23/277 (8%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A L+AY M + +I KM ++G + Y V++ Y ++ +
Sbjct: 613 DVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFL 672
Query: 235 SEMKEKGIRLDVYSYNIWL-------------SSCGSQGSTEKME-----GVFELMKVDK 276
M + G + +Y +I + S G + +E +FE M V+
Sbjct: 673 KCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKM-VEH 731
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
+ + + + + + ++E+A+ + ++ R Y+ LL +G E
Sbjct: 732 GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA 791
Query: 337 YRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
R+ + + + P + + Y ++ L G E + +F LS +YD +++
Sbjct: 792 VRLVDAMVENGLLPLLES--YKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLI 849
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+K D+ + + E+G +PN ++ L EG
Sbjct: 850 DGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 85/222 (38%), Gaps = 15/222 (6%)
Query: 156 VHGVASAEDF-----FLSLPD---TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+HG D LSL + + D+ Y ++ + A L D ++ KG
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKME 266
+ + Y ++ Y K+ + D S++ M + Y+YN+ + C + E
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
V +++ + V P T++ + +K G + A + + S D Y L
Sbjct: 566 LVAKMLTM--GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623
Query: 327 YGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIG 366
Y S G EEV V + P + Y +I AR+G
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVT--YTVLIDGYARLG 663
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 3/266 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMR-DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
VY A++ + R G LI++MR + Y + + V+M + ++ + ++ E
Sbjct: 143 VYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDE 202
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M + G D Y + L + GS ++ +FE M+V NPN F+++ + + G
Sbjct: 203 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRV--RFNPNLRHFTSLLYGWCREG 260
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++ +A+ L +++ D V Y+ LL Y GK + + + + V G +
Sbjct: 261 KIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFT 320
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I S + ++ +IF E D ++S + K GN DKA + +I++
Sbjct: 321 ILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQK 380
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G P+ S+ + H ++ + E +
Sbjct: 381 GHDPSQLSYLCIMMAHEKKEELEECM 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 146/338 (43%), Gaps = 27/338 (7%)
Query: 116 LRKF---RRYKHALEVYDWMNNRGERFRLSASDAAI---QLDLIAKVHGVASAEDFFLSL 169
+R+F R K A+EV D M G D + LD + K V A F +
Sbjct: 184 MRRFASVRMVKKAVEVLDEMPKYG-----CEPDEYVFGCLLDALCKNGSVKEAASLFEDM 238
Query: 170 PDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+ R + +LL + R A+ ++ ++++ G+ + YN ++ Y + +
Sbjct: 239 RVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMR 298
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
+ +++EMK+ + S+ I + S C ++ E M +F M+ + T++T
Sbjct: 299 DAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMR-IFTEMQ-GSGCEADVVTYTT 356
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV- 346
+ + + K G +KA E L + + G D YL + KKEE+ L +
Sbjct: 357 LISGFCKWGNTDKAYEILDDMIQK--GHDPSQLSYLCIMMAH-EKKEELEECMELIEEMR 413
Query: 347 -FPGVTNLG-YHAMISSLARIGDIEGMEKIFEEWLS--VKSSYDPRIANLMMSWYVKEGN 402
V +L Y+ MI + ++GD++ +++ E + + D I LM+ ++ +G
Sbjct: 414 KIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYI--LMVHGFLSQGC 471
Query: 403 FDKAEAFFNSIIEEG--GKPNSTSWETLAEGHIRERRI 438
+A +F ++E G P + + L +R ++
Sbjct: 472 LVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKL 509
>gi|326505288|dbj|BAK03031.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326529675|dbj|BAK04784.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 597
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 7/270 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ALL + RARM A + D M G A+++ YN M+ + +K + E+++
Sbjct: 143 DAHACTALLTSLARARMTATARRVFDGMGRAGVAMNTHVYNAMLHVCLKAGDAARAEALM 202
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M G+ LD++S+N ++ +G + V + M D V + T++T+ K
Sbjct: 203 TRMDATGVPLDLFSFNTAIALYVRKGMQYEAMCVRDRMAND-GVEADIVTWNTVIHGMCK 261
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVT 351
G++++A + R + + D V Y L+ Y G VG+ + V R + PGV
Sbjct: 262 EGRMKEASQLHRDMVAAGIEPDTVTYTTLVDGYCRAGDVGEAMNLRAVME-ARGMLPGVA 320
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y+A+I L G ++ + + E K D N +++ Y K+G+ A
Sbjct: 321 T--YNAIIRKLCEDGKMKEVNGLLSEMDERKVQADHVTCNTLINSYSKKGDMPSACKVKT 378
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++E G + + +++ L G + +++ EA
Sbjct: 379 RMMESGLQLDQFTYKALIHGFSKAKQLDEA 408
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 171/387 (44%), Gaps = 20/387 (5%)
Query: 88 LGSA-SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRL-SASD 145
LG A ++L +K G + T+ +V + K A +V + M G L + +
Sbjct: 255 LGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNV 314
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A L KV +D L L D Y L +A + R +A L+++MR+K
Sbjct: 315 LAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREK 374
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G + +N+++ K E + +++M + G+ DV +YN + + G+ K
Sbjct: 375 GVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKA 434
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+ + M V + + + T +T+ K + E+A+ L+ R D V Y +++
Sbjct: 435 YTLMDEM-VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMA 493
Query: 326 LYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDI-EGMEKIFEEWLSVK 382
Y E R+W+ + + + P ++ Y+ +I L+R+G + E ++K+ E +
Sbjct: 494 AYFKEYNSEPALRLWDEMIEKKLTPSIST--YNTLIKGLSRMGRLKEAIDKL-NELMEKG 550
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
D N+++ Y KEG+ + A F N ++E KP+ + TL G ++ +AL
Sbjct: 551 LVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKAL 610
Query: 443 SCLKGAFAAEGAKSW--RPKPVNVINF 467
+SW + K V+VI +
Sbjct: 611 KLF---------ESWVEKGKKVDVITY 628
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 109/263 (41%), Gaps = 4/263 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y LLNA+ R M G A L+ +M+ G A YN +++ Y ++ + +V
Sbjct: 238 DAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVV 297
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M G D+++YN+ + G ++ + + M+ + P+ T++T+A K
Sbjct: 298 EAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFK 357
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTN 352
A L + + V ++ ++ G+ E N + P V
Sbjct: 358 CRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDV-- 415
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+ +I + + G+I + +E + D N ++ KE +++A+ S
Sbjct: 416 ITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQS 475
Query: 413 IIEEGGKPNSTSWETLAEGHIRE 435
+ G P+ S+ T+ + +E
Sbjct: 476 PPQRGFMPDEVSYGTVMAAYFKE 498
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/272 (18%), Positives = 116/272 (42%), Gaps = 6/272 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ L++ + +A + M+ G + ++ YN ++ + + E ++++ M
Sbjct: 206 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 265
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K+ G+ +YN +S+ G ++ V E M + P+ T++ +A + G+
Sbjct: 266 KKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTAN-GFEPDLWTYNVLAAGLCQAGK 324
Query: 298 VEKA---EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
V++A ++ + R+ + + D V Y+ L + R+ R T +
Sbjct: 325 VDEAFRLKDEMERLGTLLP--DVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVT 382
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +I L + G++EG + + D N ++ + K GN KA + ++
Sbjct: 383 HNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMV 442
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G K ++ + T+ +E+R EA L+
Sbjct: 443 RRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQ 474
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 10/211 (4%)
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-VDKAVNPNWTTFSTMATMYIKMGQVEK 300
+R + + N LS+ ST + V ++PN TF+ + + G +
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD 222
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A +L ++ D V Y+ LL+ + G E + + T Y+ ++S
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVS 282
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAF-FNSIIEEG 417
+ AR+G I+ K+ E + + ++P + N++ + + G D EAF +E
Sbjct: 283 AYARLGWIKQATKVVEAMTA--NGFEPDLWTYNVLAAGLCQAGKVD--EAFRLKDEMERL 338
Query: 418 GK--PNSTSWETLAEGHIRERRILEALSCLK 446
G P+ ++ TLA+ + R +AL L+
Sbjct: 339 GTLLPDVVTYNTLADACFKCRCSSDALRLLE 369
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%)
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
+KG V + YN ++ K + D ++M+ +G++ D ++YN+ LS+ G TE
Sbjct: 618 EKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTE 677
Query: 264 KMEGVF 269
+ + +
Sbjct: 678 EAQNML 683
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 120/258 (46%), Gaps = 3/258 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR G+L+N + R +A L+DKM + GY + YN ++ K K ++
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
E++ KGIR +V +Y ++ C S ++ + +++K K + PN T+S + ++
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK--KKITPNVITYSALLDAFV 271
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G+V +A+E + D V Y L++ + +E ++++L S +
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ +I+ + +E K+F E + N ++ + + G+ DKA+ FF+ +
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 414 IEEGGKPNSTSWETLAEG 431
G P+ ++ L G
Sbjct: 392 DFFGISPDIWTYNILLGG 409
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y L+N + +A+ + L +M +G +++ YN ++ + + + D+ +
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
S+M GI D+++YNI L G EK +FE M+ + ++ + T++T+
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ-KREMDLDIVTYTTVIRG 444
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
K G+VE+A + + D V Y ++S + G EV ++
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFE 270
+ +N +++ +K+K+YD V S+ +M+ GIR D+Y++NI ++ C + + + +
Sbjct: 86 VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGK 145
Query: 271 LMK-----------------------------VDKAV----NPNWTTFSTMATMYIKMGQ 297
++K VDK V P+ ++ + K +
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
V A + + +E + + V Y L++ + + + R+ + + + + P V + Y
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV--ITY 263
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSI 413
A++ + + G + +++FEE V+ S DP I +++ D+A F+ +
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEM--VRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLM 321
Query: 414 IEEGGKPNSTSWETLAEGHIRERRI 438
+ +G + S+ TL G + +R+
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRV 346
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 136/304 (44%), Gaps = 13/304 (4%)
Query: 150 LDLIAKVHGVASAEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+D K + A+D F + + + R Y L+N + ++ + +KM++ G
Sbjct: 205 IDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGV 264
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ YN +M K + + EM+E+G+ ++ +YN + + +
Sbjct: 265 FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANK 324
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
V + MK D +NPN T++T+ + +G++ KA R ++SR V Y+ L+S +
Sbjct: 325 VVDQMKSD-GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 328 GSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS-- 383
G ++ R + P + + Y +I + AR + MEK + LS++
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKP--SKVTYTILIDTFAR---SDNMEKAIQLRLSMEELG 438
Query: 384 -SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
D ++++ + +G ++A F S++E+ +PN + T+ G+ +E AL
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 443 SCLK 446
LK
Sbjct: 499 KLLK 502
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 155/333 (46%), Gaps = 13/333 (3%)
Query: 119 FRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIA-KVHG---VASAEDFFLSLPDTLK 174
F ++H E + L + ++ L +I+ K+H +S+ +L+ +T K
Sbjct: 32 FHEFQHTHESISILLRLLLSGNLFSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSK 91
Query: 175 DR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
+ R+Y ++N+YV+++ + ++M D G+ S +N ++T + +++ S
Sbjct: 92 TKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSF 151
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK-MEGVFELMKVDKAVNPNWTTFSTMATMY 292
+E K K + LDVYS+ I + C G EK + + EL + +PN ++T+
Sbjct: 152 FNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEF--GFSPNVVIYTTLIDGC 208
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGV 350
K G++EKA++ + + Y L++ G K++ + ++ + VFP +
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
Y+ +++ L + G + ++F+E S + N ++ +E ++A
Sbjct: 269 YT--YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV 326
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ + +G PN ++ TL +G ++ +ALS
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/330 (18%), Positives = 127/330 (38%), Gaps = 71/330 (21%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V+ +L K R K A +V+D M RG + +++
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERG-----------VSCNIVT----------------- 305
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
Y L+ R A ++D+M+ G + + YN ++ + + + +
Sbjct: 306 -------YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
S+ ++K +G+ + +YNI +S +G T + + M+ ++ + P+ T++ +
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME-ERGIKPSKVTYTILIDT 417
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
+ + +EKA ++ R++ EE+ V +++
Sbjct: 418 FARSDNMEKA------IQLRLS-------------------MEELGLVPDVHT------- 445
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y +I G + ++F+ + + I N M+ Y KEG+ +A
Sbjct: 446 ---YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ E+ PN S+ + E +ER+ EA
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 167 LSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTL 220
LSL LK R + Y L++ + R A ++ +M ++G + Y +++
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
+ + ++ + M+E G+ DV++Y++ + +G + +F+ M V+K P
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM-VEKNCEP 476
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
N ++TM Y K G +A + L+ +E + + Y Y++ + K +E R+
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 125/308 (40%), Gaps = 41/308 (13%)
Query: 162 AEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV------------ 209
E + D D RV+ V A M A L DKM + G +
Sbjct: 168 VEQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHL 227
Query: 210 ------------------------HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD 245
++ YN++ ++ E ++ +M+ +G D
Sbjct: 228 SEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPD 287
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
V SY+ ++ G +++ + E M++ K + PN T++ + + K G+V +AE L
Sbjct: 288 VISYSTVINGYCQVGELQRVLKLIEEMQI-KGLKPNPYTYNGVILLLCKTGKVAEAERVL 346
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLA 363
R + S D V Y L+ + +G YR+++ R + P + Y A+I L
Sbjct: 347 REMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDF--ITYTAVICGLC 404
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
+ G + +K+F E + + D ++ Y KEG +A + N +++ G PN
Sbjct: 405 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIV 464
Query: 424 SWETLAEG 431
++ LA+G
Sbjct: 465 TYTALADG 472
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 130/300 (43%), Gaps = 9/300 (3%)
Query: 144 SDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
+ + QL + + H + + +PD + Y ++N Y + LI++M+
Sbjct: 260 THSLCQLGRVVEAHQLLLQMELRGCIPDVIS----YSTVINGYCQVGELQRVLKLIEEMQ 315
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
KG + YN ++ L K + E E ++ EM +GI D Y + G+
Sbjct: 316 IKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 375
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+F+ M+ + ++P++ T++ + + G+V +A++ + + D V Y L
Sbjct: 376 SAYRLFDEMQ-KRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 434
Query: 324 LSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+ Y GK +E + + N L + P + Y A+ L + G+++ ++ E
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT--YTALADGLCKCGEVDTANELLHEMCRK 492
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ N +++ K GN D+A + G P++ ++ TL + + + R ++ A
Sbjct: 493 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 552
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 121/269 (44%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL++ Y + A L ++M G + + Y + K E D ++
Sbjct: 427 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 486
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM KG+ L++Y+YN ++ G+ ++ + + M+V +P+ T++T+ Y K
Sbjct: 487 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV-AGFHPDAVTYTTLMDAYCK 545
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV--WNLYRSVFPGVTN 352
++ +A E LR++ R V ++ L++ + G E+ ++ W L + + P T
Sbjct: 546 SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 605
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+++I ++ +I+ + D N+++ + K N +A
Sbjct: 606 --YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 663
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
++ +G +S+ L +G + ++ LEA
Sbjct: 664 MVGKGFNLTVSSYNALIKGFYKRKKFLEA 692
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 131/302 (43%), Gaps = 9/302 (2%)
Query: 152 LIAKVHGVASAEDFFLSLPDTLKDRR------VYGALLNAYVRARMRGNAELLIDKMRDK 205
L+ +HG AS L L + ++ ++ Y AL+NA+ R + AE + +++++
Sbjct: 258 LLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 317
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G+ YN +M Y + + S M+ G D SYNI + + G G E
Sbjct: 318 GHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDA 377
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+ VFE MK + P + + + Y K G V K E+ + + D + +L+
Sbjct: 378 QAVFEEMK-RLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLN 436
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLG-YHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
LYG +G+ ++ V S P T++ Y+ +I+ R G E ME +F+ +
Sbjct: 437 LYGRLGQFGKMEEVLTAMESG-PYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNLK 495
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
D + Y ++ + K F +I+ G P+ + + L E +I + +
Sbjct: 496 PDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSCSSEDQIEQVTTV 555
Query: 445 LK 446
++
Sbjct: 556 IR 557
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 131/321 (40%), Gaps = 12/321 (3%)
Query: 108 ELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS----AE 163
+L VV +LR +++ L + W+ +R S + +L+ +G S AE
Sbjct: 114 DLINVVVQLRLNKKWDLILLICQWI-----LYRSSFQSDVMIFNLVIDAYGRKSLYKMAE 168
Query: 164 DFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY 221
+ L + + Y LL AY + + AE + +MR G ++ YN +
Sbjct: 169 TTYFELIEARCIPTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGL 228
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
MK + MK + +Y + ++ G + +F M+ K PN
Sbjct: 229 MKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKC-KPN 287
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
T++ + + + G EKAEE +++ D Y+ L+ Y G +++
Sbjct: 288 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFS 347
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
L + + Y+ M+ + R G E + +FEE + + + L++S Y K G
Sbjct: 348 LMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAG 407
Query: 402 NFDKAEAFFNSIIEEGGKPNS 422
+ K E N + E G +P++
Sbjct: 408 DVAKCEDIVNELHESGLEPDT 428
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 122/271 (45%), Gaps = 13/271 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+N + +A A L ++MR + + Y ++ + + ++ E + ++
Sbjct: 255 TYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQL 314
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+E G DVY+YN + + G +F LM+ P+ +++ M Y + G
Sbjct: 315 QEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQ-HMGCEPDRASYNIMVDAYGRGGL 373
Query: 298 VEKAE---ESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVT 351
E A+ E ++R+ T + + LLS Y G V K E++ V L+ S T
Sbjct: 374 HEDAQAVFEEMKRLGITPTMKSHM---LLLSAYSKAGDVAKCEDI--VNELHESGLEPDT 428
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ ++M++ R+G ME++ S + D N++++ Y + G F+K E F
Sbjct: 429 FV-LNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQ 487
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
S+ + KP+ +W + + R++ + L
Sbjct: 488 SLAAKNLKPDVVTWTSRLGAYSRKKLYTKCL 518
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 144/334 (43%), Gaps = 10/334 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWM--NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL 169
++ L K R+ A+++++ M N +G+ F + +D + K A D F +
Sbjct: 118 LINGLCKARKTGLAIKLHEKMKGNCKGDVFTY-----GMIIDSLCKDGMTTEALDMFSEM 172
Query: 170 --PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
L D VY +L++ R A +M +G + YN ++ + +
Sbjct: 173 IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLW 232
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
EV ++ M ++G D +++ I + +G + + + ELM K P+ T++T
Sbjct: 233 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMH-HKGKEPDILTYNT 291
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+ +GQ+E A + + R + Y+ L++ Y K +E +R++ R
Sbjct: 292 LMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKG 351
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
+ + Y+ +I +L + G + +K+F E + +++ K G+ ++A
Sbjct: 352 LKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAI 411
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F SI + KPN + L +G R ++ EA
Sbjct: 412 DLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 445
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 155/349 (44%), Gaps = 37/349 (10%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE-----DFFLSL- 169
L +F R K ALE + M RG ++D LI HG++ A +FL+L
Sbjct: 191 LCRFGRLKEALEFFKEMEGRG-----ISADVYTYNSLI---HGLSRAGLWKEVTWFLNLM 242
Query: 170 ------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
PD + L++ + G A+ +++ M KG L YN +M
Sbjct: 243 VDRGFSPDAF----TFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCL 298
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNW 282
+ + ++ + + ++GI+L+V+SYNI ++ C Q E +FE M+ K + P+
Sbjct: 299 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFR-LFEEMR-PKGLKPST 356
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
T++T+ + G+V A++ VE + G+ Y + L G + K + +L
Sbjct: 357 VTYNTLIGALCQSGRVRTAQKLF--VEMQTCGQFLKLSTYCVLLDG-LCKNGHLEEAIDL 413
Query: 343 YRSVF-----PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
++S+ P + + ++ + R G +E K F+E D N++++
Sbjct: 414 FQSIKKTEHKPNIEV--FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGL 471
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+G +A + E+G P+S ++ + + ++E I EA+ L+
Sbjct: 472 CNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLE 520
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 142/315 (45%), Gaps = 22/315 (6%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV------ 178
AL+ + +++N + AS + +D+ A++H + SL ++ R+
Sbjct: 73 ALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTV----WSLIHRMRSLRIGPSPKT 128
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ + Y A A L M + G +N ++ + K K ++ + ++
Sbjct: 129 FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 188
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +D +YN+ L+ C + + + +E + E+ V++ +NPN TT++TM + + GQ
Sbjct: 189 GR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEM--VERGINPNLTTYNTMLKGFFRAGQ 245
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+ A E ++ R D V Y ++ +G G+ + V++ + V P V Y
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT--Y 303
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSI 413
+AMI L + ++E +FEE V+ Y+P + N+++ G F + E +
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEM--VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 414 IEEGGKPNSTSWETL 428
EG +PN ++ +
Sbjct: 362 ENEGCEPNFQTYNMM 376
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 97/251 (38%), Gaps = 41/251 (16%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
LD++ K V A + F +L D Y +LN + + A ++ +M ++G
Sbjct: 168 LDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGIN 227
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ YN M+ + + + EMK++ +DV +Y + G G ++ V
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 269 FELM-----------------------KVDKAV-----------NPNWTTFSTMATMYIK 294
F+ M V+ AV PN TT++ +
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG--VTN 352
G+ + EE ++R+E+ + Y+ ++ Y EV + L+ + G + N
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECS---EVEKALGLFEKMGSGDCLPN 404
Query: 353 L-GYHAMISSL 362
L Y+ +IS +
Sbjct: 405 LDTYNILISGM 415
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A++ + NA ++ ++M +GY + YNV++ E+ E ++ M
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT-MYIK 294
+ +G + +YN+ + EK G+FE M + PN T++ + + M+++
Sbjct: 362 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL-PNLDTYNILISGMFVR 418
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 9/290 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ AYVRA ID M KG +++ Y ++ Y K + D+ S
Sbjct: 349 DLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFF 408
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+MKE G +V +YN L G + E+M + M+ + PN T++TM M
Sbjct: 409 RQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCA-PNSVTWNTMLAMCGN 467
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVF-PGVTN 352
G + R ++S +R ++ L+ YG G + +V +++ + ++ F P VT
Sbjct: 468 KGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTT 527
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+A++++LAR GD E E + + S + +LM++ Y K GN E
Sbjct: 528 --YNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEE 585
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
I P+ TL + + R AL ++ AF ++P V
Sbjct: 586 IYNGHIFPSWILLRTLVLANFKRR----ALMGMERAFQEFCKHGYKPDLV 631
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 119/253 (47%), Gaps = 5/253 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +LL + +A + A ++ +M + YN ++ Y++ ++E + M
Sbjct: 317 TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTM 376
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KGI + +Y +++ G G +K F MK V PN T++ + M K +
Sbjct: 377 IRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCV-PNVCTYNAILGMLGKKSR 435
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+E+ + L + S + V ++ +L++ G+ G + V RV+ +S ++A
Sbjct: 436 LEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNA 495
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIE 415
+I + R G + K++EE +K+ + P + N +++ + G+++ AE+ +
Sbjct: 496 LIGAYGRCGSQIDVVKMYEEM--IKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKS 553
Query: 416 EGGKPNSTSWETL 428
+G KPN TS+ +
Sbjct: 554 KGFKPNETSYSLM 566
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 129/288 (44%), Gaps = 12/288 (4%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLK------DRRVYGALLNAYVRARMRGNAELLIDKMR 203
++L+ ++ G S L L D + D R + +L+AY R A + +KMR
Sbjct: 177 VELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMR 236
Query: 204 DKGYAVHSLPYNVMMTLYMKI-KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST 262
G + + YNVM+ +Y K+ + ++++ ++ EM+ G+ D ++ + +S+CG +G
Sbjct: 237 KTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLL 296
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
++ F +K + V + T++++ ++ K G +A L+ +E D V Y+
Sbjct: 297 DEARKFFARLKSEGYVAGTF-TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNE 355
Query: 323 LLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
L++ Y G EE + + + + P + Y +I++ + G + F +
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNA--ITYTTVINAYGKAGKEDKALSFFRQMKE 413
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ N ++ K+ ++ + G PNS +W T+
Sbjct: 414 SGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTM 461
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 136/322 (42%), Gaps = 37/322 (11%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRR------VYGALLNAY-VRARMRGNAELLI 199
AI + +G A ED LS +K+ Y A+L ++R+ ++L
Sbjct: 385 AITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLC 444
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
D MR G A +S+ +N M+ + + V + EMK G + ++N + + G
Sbjct: 445 D-MRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRC 503
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
GS + ++E M + P TT++ + + G E AE + ++S+ +
Sbjct: 504 GSQIDVVKMYEEM-IKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETS 562
Query: 320 YHYLLSLYGSVGK-------KEEVYR-----VWNLYRSVFPGVTNLGYHAMISSLARIGD 367
Y +L+ Y G +EE+Y W L R++ + N A++
Sbjct: 563 YSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLV--LANFKRRALM-------- 612
Query: 368 IEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
GME+ F+E+ K Y P + N M+S + K +D+A I E G +P+ ++
Sbjct: 613 --GMERAFQEF--CKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTY 668
Query: 426 ETLAEGHIRERRILEALSCLKG 447
+L + + R + LKG
Sbjct: 669 NSLMDMYARGGECWKGEEILKG 690
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 133/308 (43%), Gaps = 46/308 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+R + AL+ AY R + + + ++M G+ YN ++ + +++ ES++
Sbjct: 489 NRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVI 548
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE------------------------ 270
+MK KG + + SY++ L+ G+ +E + E
Sbjct: 549 LDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKR 608
Query: 271 --LMKVDKAVN--------PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
LM +++A P+ F++M +++ K ++A E LR + D V Y
Sbjct: 609 RALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTY 668
Query: 321 HYLLSLYGSVG---KKEEVYRVWNLYRSVFPGVTNL-GYHAMISSLARIGDIEGMEKIFE 376
+ L+ +Y G K EE+ + + +S G +L Y+ +I R G ++ +
Sbjct: 669 NSLMDMYARGGECWKGEEILK--GIQKS--GGKPDLVSYNTVIKGFCRQGLMQEAIRTLS 724
Query: 377 EWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
E S P I N ++ Y +G F + E + +I+ +PN +++ + +G+ +
Sbjct: 725 EM--TISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCK 782
Query: 435 ERRILEAL 442
++ EA+
Sbjct: 783 GKKYKEAM 790
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 112/257 (43%), Gaps = 51/257 (19%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+D++ + Y++ + ++ Y +I +Y+ +M +M++ G+ + +YN+ L G
Sbjct: 196 LLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYG 255
Query: 258 SQG-STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
G S K+ G+ + M+ + + + T ST+ + + G +++A + R++S
Sbjct: 256 KMGRSWNKILGLLDEMRSN-GLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAG 314
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y+ LL ++G G I+
Sbjct: 315 TFTYNSLLQVFGKAG------------------------------------------IYS 332
Query: 377 EWLSV-----KSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
E LS+ K++ P + N +++ YV+ G ++ F +++I +G PN+ ++ T+
Sbjct: 333 EALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVI 392
Query: 430 EGHIRERRILEALSCLK 446
+ + + +ALS +
Sbjct: 393 NAYGKAGKEDKALSFFR 409
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L++ Y R E ++ ++ G + YN ++ + + E +
Sbjct: 664 DLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTL 723
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM GIR + +YN +++ +G ++E V M + PN T+ + Y K
Sbjct: 724 SEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYM-IQHDCRPNELTYKIVVDGYCK 782
Query: 295 MGQVEKA---------------EESLRRVESRI 312
+ ++A ++SLRR+ RI
Sbjct: 783 GKKYKEAMDFVSNITEMDKSFDDQSLRRLTFRI 815
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 142/315 (45%), Gaps = 22/315 (6%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV------ 178
AL+ + +++N + AS + +D+ A++H + SL ++ R+
Sbjct: 73 ALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTV----WSLIHRMRSLRIGPSPKT 128
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ + Y A A L M + G +N ++ + K K ++ + ++
Sbjct: 129 FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 188
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +D +YN+ L+ C + + + +E + E+ V++ +NPN TT++TM + + GQ
Sbjct: 189 GR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEM--VERGINPNLTTYNTMLKGFFRAGQ 245
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+ A E ++ R D V Y ++ +G G+ + V++ + V P V Y
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT--Y 303
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSI 413
+AMI L + ++E +FEE V+ Y+P + N+++ G F + E +
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEM--VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 414 IEEGGKPNSTSWETL 428
EG +PN ++ +
Sbjct: 362 ENEGCEPNFQTYNMM 376
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 97/251 (38%), Gaps = 41/251 (16%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
LD++ K V A + F +L D Y +LN + + A ++ +M ++G
Sbjct: 168 LDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGIN 227
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ YN M+ + + + EMK++ +DV +Y + G G ++ V
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 269 FELM-----------------------KVDKAV-----------NPNWTTFSTMATMYIK 294
F+ M V+ AV PN TT++ +
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG--VTN 352
G+ + EE ++R+E+ + Y+ ++ Y EV + L+ + G + N
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECS---EVEKALGLFEKMGSGDCLPN 404
Query: 353 L-GYHAMISSL 362
L Y+ +IS +
Sbjct: 405 LDTYNILISGM 415
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A++ + NA ++ ++M +GY + YNV++ E+ E ++ M
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT-MYIK 294
+ +G + +YN+ + EK G+FE M + PN T++ + + M+++
Sbjct: 362 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL-PNLDTYNILISGMFVR 418
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 131/283 (46%), Gaps = 20/283 (7%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +LL+ YVR + G + +++ M ++G Y +++ ++ +VE++ +EMK
Sbjct: 169 YNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMK 228
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ DVY Y +++ G+ + V + V V PN T+ + + K+GQ+
Sbjct: 229 ANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDEC-VGNGVEPNERTYGVLIKGFCKIGQM 287
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV----------WNL--YRSV 346
E AE L ++ + G +++ ++ ++ Y G ++ ++ N+ Y ++
Sbjct: 288 EAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTL 347
Query: 347 FPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
G+ +G Y +IS + GD+ ++F E ++ ++M+ Y K
Sbjct: 348 ACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAK 407
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+G +AE F + ++G P+ ++ +L GH ++ AL
Sbjct: 408 KGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVAL 450
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 35/320 (10%)
Query: 127 EVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLN 184
E+ + M N G + I +D ++ ++ E F + + + D +Y A++N
Sbjct: 187 EILEIMENEG--IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVIN 244
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
AY RA A ++D+ G + Y V++ + KI + + E ++++M+ +G+ L
Sbjct: 245 AYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGL 304
Query: 245 DVYSYNIWLSSCGSQGSTE---KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ +N + +G + K++ E + V+ N T++T+A +MG V
Sbjct: 305 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVEL----NIYTYNTLACGLCRMGVVP-- 358
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMI 359
+ V Y L+S++ G E R++ + P V L Y MI
Sbjct: 359 --------------NYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSV--LTYSVMI 402
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEEG 417
A+ G I E+ +E K + P + ++ + G D A F + + G
Sbjct: 403 HGYAKKGRIREAERFRKEM--EKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRG 460
Query: 418 GKPNSTSWETLAEGHIRERR 437
+PN ++ L G +E R
Sbjct: 461 TEPNVVAYTALISGLAKEGR 480
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 107/273 (39%), Gaps = 5/273 (1%)
Query: 164 DFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
D +S +L R + +LL+ R+ A LL + +V +V++ K
Sbjct: 84 DAAVSRLGSLDPRSLTFSLLSLRRAGRLADAAGLLERALGSCPGSVSPFAASVVVDGLCK 143
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
D+ ++ +M G+ L+ YN L Q +++ + E+M+ ++ +
Sbjct: 144 SGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIME-NEGIEATVG 202
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
T++ + + K E +++ D Y +++ Y G +V +
Sbjct: 203 TYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLD-- 260
Query: 344 RSVFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
V GV Y +I +IG +E E + + + I N M+ Y ++G
Sbjct: 261 ECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKG 320
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
D A ++ + G + N ++ TLA G R
Sbjct: 321 MVDDALKIKAAMEKIGVELNIYTYNTLACGLCR 353
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 9/290 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ AYVRA ID M KG +++ Y ++ Y K + D+ S
Sbjct: 349 DLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFF 408
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+MKE G +V +YN L G + E+M + M+ + PN T++TM M
Sbjct: 409 RQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCA-PNSVTWNTMLAMCGN 467
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVF-PGVTN 352
G + R ++S +R ++ L+ YG G + +V +++ + ++ F P VT
Sbjct: 468 KGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTT 527
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+A++++LAR GD E E + + S + +LM++ Y K GN E
Sbjct: 528 --YNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEE 585
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
I P+ TL + + R AL ++ AF ++P V
Sbjct: 586 IYNGHIFPSWILLRTLVLANFKRR----ALMGMERAFQEFCKHGYKPDLV 631
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 119/253 (47%), Gaps = 5/253 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +LL + +A + A ++ +M + YN ++ Y++ ++E + M
Sbjct: 317 TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTM 376
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KGI + +Y +++ G G +K F MK V PN T++ + M K +
Sbjct: 377 IRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCV-PNVCTYNAILGMLGKKSR 435
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+E+ + L + S + V ++ +L++ G+ G + V RV+ +S ++A
Sbjct: 436 LEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNA 495
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIE 415
+I + R G + K++EE +K+ + P + N +++ + G+++ AE+ +
Sbjct: 496 LIGAYGRCGSQIDVVKMYEEM--IKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKS 553
Query: 416 EGGKPNSTSWETL 428
+G KPN TS+ +
Sbjct: 554 KGFKPNETSYSLM 566
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 129/288 (44%), Gaps = 12/288 (4%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLK------DRRVYGALLNAYVRARMRGNAELLIDKMR 203
++L+ ++ G S L L D + D R + +L+AY R A + +KMR
Sbjct: 177 VELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMR 236
Query: 204 DKGYAVHSLPYNVMMTLYMKI-KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST 262
G + + YNVM+ +Y K+ + ++++ ++ EM+ G+ D ++ + +S+CG +G
Sbjct: 237 KTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLL 296
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
++ F +K + V + T++++ ++ K G +A L+ +E D V Y+
Sbjct: 297 DEARKFFARLKSEGYVAGTF-TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNE 355
Query: 323 LLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
L++ Y G EE + + + + P + Y +I++ + G + F +
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNA--ITYTTVINAYGKAGKEDKALSFFRQMKE 413
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ N ++ K+ ++ + G PNS +W T+
Sbjct: 414 SGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTM 461
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 136/322 (42%), Gaps = 37/322 (11%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLKDRR------VYGALLNAY-VRARMRGNAELLI 199
AI + +G A ED LS +K+ Y A+L ++R+ ++L
Sbjct: 385 AITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLC 444
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
D MR G A +S+ +N M+ + + V + EMK G + ++N + + G
Sbjct: 445 D-MRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRC 503
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
GS + ++E M + P TT++ + + G E AE + ++S+ +
Sbjct: 504 GSQIDVVKMYEEM-IKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETS 562
Query: 320 YHYLLSLYGSVGK-------KEEVYR-----VWNLYRSVFPGVTNLGYHAMISSLARIGD 367
Y +L+ Y G +EE+Y W L R++ + N A++
Sbjct: 563 YSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLV--LANFKRRALM-------- 612
Query: 368 IEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
GME+ F+E+ K Y P + N M+S + K +D+A I E G +P+ ++
Sbjct: 613 --GMERAFQEF--CKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTY 668
Query: 426 ETLAEGHIRERRILEALSCLKG 447
+L + + R + LKG
Sbjct: 669 NSLMDMYARGGECWKGEEILKG 690
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 133/308 (43%), Gaps = 46/308 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+R + AL+ AY R + + + ++M G+ YN ++ + +++ ES++
Sbjct: 489 NRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVI 548
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE------------------------ 270
+MK KG + + SY++ L+ G+ +E + E
Sbjct: 549 LDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKR 608
Query: 271 --LMKVDKAVN--------PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
LM +++A P+ F++M +++ K ++A E LR + D V Y
Sbjct: 609 RALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTY 668
Query: 321 HYLLSLYGSVG---KKEEVYRVWNLYRSVFPGVTNL-GYHAMISSLARIGDIEGMEKIFE 376
+ L+ +Y G K EE+ + + +S G +L Y+ +I R G ++ +
Sbjct: 669 NSLMDMYARGGECWKGEEILK--GIQKS--GGKPDLVSYNTVIKGFCRQGLMQEAIRTLS 724
Query: 377 EWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
E S P I N ++ Y +G F + E + +I+ +PN +++ + +G+ +
Sbjct: 725 EM--TISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCK 782
Query: 435 ERRILEAL 442
++ EA+
Sbjct: 783 GKKYKEAM 790
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 112/257 (43%), Gaps = 51/257 (19%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+D++ + Y++ + ++ Y +I +Y+ +M +M++ G+ + +YN+ L G
Sbjct: 196 LLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYG 255
Query: 258 SQG-STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
G S K+ G+ + M+ + + + T ST+ + + G +++A + R++S
Sbjct: 256 KMGRSWNKILGLLDEMRSN-GLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAG 314
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y+ LL ++G G I+
Sbjct: 315 TFTYNSLLQVFGKAG------------------------------------------IYS 332
Query: 377 EWLSV-----KSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
E LS+ K++ P + N +++ YV+ G ++ F +++I +G PN+ ++ T+
Sbjct: 333 EALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVI 392
Query: 430 EGHIRERRILEALSCLK 446
+ + + +ALS +
Sbjct: 393 NAYGKAGKEDKALSFFR 409
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L++ Y R E ++ ++ G + YN ++ + + E +
Sbjct: 664 DLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTL 723
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM GIR + +YN +++ +G ++E V M + PN T+ + Y K
Sbjct: 724 SEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYM-IQHDCRPNELTYKIVVDGYCK 782
Query: 295 MGQVEKA---------------EESLRRVESRI 312
+ ++A ++SLRR+ RI
Sbjct: 783 GKKYKEAMDFVSNITEMDKSFDDQSLRRLTFRI 815
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 133/309 (43%), Gaps = 39/309 (12%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL-PYNVMMTLYMKIKEYDEV 230
+ D Y L+N + +A+ A +L + M+ G +L Y+V++ Y K E E
Sbjct: 145 VVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEG 204
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++ EM+ +G++ DV+ Y+ +S+ +G E +F+ M + + V+PN T+S +
Sbjct: 205 LGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEM-LRRKVSPNVVTYSCLMQ 263
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL-------- 342
+ G+ +A E L+ + +R D V Y L G+ + +V +L
Sbjct: 264 GLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEP 323
Query: 343 ----YRSVFPGVTN-----------------------LGYHAMISSLARIGDIEGMEKIF 375
Y V G+ + Y+ ++ L G I ++
Sbjct: 324 GTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLW 383
Query: 376 EEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
+ LS K P + N ++ KEG A +S++E G + N ++ L EG++
Sbjct: 384 KLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYL 443
Query: 434 RERRILEAL 442
R+++EAL
Sbjct: 444 AARKLIEAL 452
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 6/266 (2%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
AL ++V A ++ M +G+ V+ N+++ + + + D+ S+ S+MK
Sbjct: 82 ALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRN 141
Query: 241 --GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ D +YN ++ + +FE MK PN T+S + Y K G+V
Sbjct: 142 YDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEV 201
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
+ L +E D Y L+S + G E +++ L R V P V Y
Sbjct: 202 GEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVT--YS 259
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L R G ++ ++ + D ++ K G A + ++++
Sbjct: 260 CLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQK 319
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G +P + ++ + G +E R+ +A
Sbjct: 320 GEEPGTLTYNVVVNGLCKEDRMDDAF 345
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD-KAVNPNWTTFSTMAT 290
S++S M ++G ++VY+ N+ L G +K +F MK + V P+ T++T+
Sbjct: 98 SVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVN 157
Query: 291 MYIKMGQVEKAEESLRRVESRITGR-DRVPYHYLLSLY---GSVGKK----EEVYRVWNL 342
+ K ++ +A ++ R + V Y L+ Y G VG+ EE+ R L
Sbjct: 158 GFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMER-EGL 216
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
VF Y ++IS+ GDIE ++F+E L K S + + +M + G
Sbjct: 217 KADVFV------YSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGR 270
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ +A + G +P+ ++ LA+G + R +A+ L
Sbjct: 271 WREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVL 313
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 149/360 (41%), Gaps = 12/360 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L + + G+A ++D M KG +L YNV++ K D+ +V
Sbjct: 289 DVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVV 348
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDK-AVNPNWTTFSTMATMY 292
M +KG + D +YN L CG+ E M+ +++L+ +K V P+ T + +
Sbjct: 349 EMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMD-LWKLLLSEKFHVKPDVFTCNNLIQGL 407
Query: 293 IKMGQVEKAEE-SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
K G+V A VE + G + V Y++L+ Y + K E ++W
Sbjct: 408 CKEGRVHDAARIHSSMVEMGLQG-NIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPN 466
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAF 409
++ Y MI+ L ++ + +F + S P + N +M+ +E + ++A +
Sbjct: 467 SMTYSVMINGLCKMQMLSVARGLFCKMKD--SGIRPTVIDYNALMTSLCREDSLEQARSL 524
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFK 469
F + + S+ + +G ++ + A L F + + + F K
Sbjct: 525 FQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSK 584
Query: 470 ACEEESDMGSKEAFVALLRQPGYRKEKDYMSLIGL---TDEAVAENNKKNDEDSDEDSEM 526
+ MG E V+ PG + GL T++ ++ ++ D+D DS++
Sbjct: 585 LGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKL 644
>gi|242037185|ref|XP_002465987.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
gi|241919841|gb|EER92985.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
Length = 480
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 127/279 (45%), Gaps = 13/279 (4%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D + L+N ++R ++D+M G +S+ +N ++ Y K ++E+
Sbjct: 192 DCKPDGYTFSVLINCCAKSRRFDLIPAVLDEMSYLGIECNSVIHNAIIDGYGKAAMFEEM 251
Query: 231 ESMVSEMKEKGIRL-DVYSYNIWLSSCGSQGSTEKME---GVFELMKVDKAVNPNWTTFS 286
E +S M E G + D+Y+ N + + G+ G T++ME F+LM V+ P+ TF+
Sbjct: 252 EGALSAMLESGSNVPDIYTMNSVIGAYGNHGRTDEMEKSYSEFQLMGVE----PDTKTFN 307
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
M Y K G +K R ++ R V ++ ++ +G G E++ + L +
Sbjct: 308 IMIKSYGKAGMYDKMMSIFRYMKKRFFSPTAVTFNTVIECFGRAGNIEKMEYYFRLMKIQ 367
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
+ Y ++++ ++ G ++ + I + + D N ++S Y K G+
Sbjct: 368 GVKPNPITYCSLVNGYSKAGLLDKVPGIIRQTENTNVVLDTPFFNCVISAYAKSGDIKIM 427
Query: 407 EAFFNSIIEEGGKPNSTSWETL-----AEGHIRERRILE 440
E + E+ KP+ ++ T+ A+G R+LE
Sbjct: 428 EEMLQLMKEKKCKPDKITYATMIQAYTAQGMDEAARLLE 466
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 123/263 (46%), Gaps = 1/263 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +LL+ YVR + G + +++ M ++G Y +++ ++ +VE++ +EMK
Sbjct: 215 YNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMK 274
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ DVY Y +++ G+ + V + V V PN T+ + + K+GQ+
Sbjct: 275 ANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDEC-VGNGVEPNERTYGVLINGFCKIGQM 333
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
E AE L ++ + G +++ ++ ++ Y G ++ ++ + + Y+ +
Sbjct: 334 EAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTL 393
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
L R+ ++ + + + + + ++S + K+G+ +A F + E+G
Sbjct: 394 ACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGA 453
Query: 419 KPNSTSWETLAEGHIRERRILEA 441
P+ ++ + +G+ ++ I EA
Sbjct: 454 TPSVVTYNVMIDGYTKKGSIREA 476
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 119/256 (46%), Gaps = 5/256 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ R YG L+N + + AE+L+ M+ +G ++ + +N M+ Y + D+ +
Sbjct: 316 NERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIK 375
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M++ G+ LD+Y+YN ++ + + +M ++ V PN+ T++T+ +++ K
Sbjct: 376 AAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM-IEMGVVPNYVTYTTLISIHCK 434
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG--KKEEVYRVWNLYRSVFPGVTN 352
G + +A R + + V Y+ ++ Y G ++ E +R + P V
Sbjct: 435 DGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYT 494
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y +++ G ++ K+FEE + + ++S KEG + A ++
Sbjct: 495 --YASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDD 552
Query: 413 IIEEGGKPNSTSWETL 428
+++ G P+ + + L
Sbjct: 553 MLKAGLIPDDSLYSAL 568
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 110/248 (44%), Gaps = 1/248 (0%)
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
+A L+D M G ++++L YN ++ Y++ K+ V+ ++ M+ +GI V +Y I +
Sbjct: 195 DARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILV 254
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
S + K+E +F MK + V + ++ + Y + G + +A + L
Sbjct: 255 DSLSTARDISKVEALFNEMKANNVVGDVY-LYTAVINAYCRAGNMRRAAKVLDECVGNGV 313
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
+ Y L++ + +G+ E + + G+ + ++ MI R G ++ K
Sbjct: 314 EPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALK 373
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
I + D N + + D+A+ + +IE G PN ++ TL H
Sbjct: 374 IKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHC 433
Query: 434 RERRILEA 441
++ ++EA
Sbjct: 434 KDGDMVEA 441
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 98/240 (40%), Gaps = 5/240 (2%)
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+V L +V++ K D+ ++ +M G+ L+ YN L Q +++
Sbjct: 174 SVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQE 233
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ E+M+ ++ + T++ + + K E +++ D Y +++ Y
Sbjct: 234 ILEIME-NEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAY 292
Query: 328 GSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G +V + V GV Y +I+ +IG +E E + +
Sbjct: 293 CRAGNMRRAAKVLD--ECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGL 350
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ I N M+ Y ++G D A ++ + G + + ++ TLA G R R+ EA + L
Sbjct: 351 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLL 410
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 147/321 (45%), Gaps = 12/321 (3%)
Query: 109 LCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ--LDLIAKVHGVASAEDFF 166
+ +V++ L + R+K A+E + M ERF + A+ +D + K + V A D F
Sbjct: 191 MTKVMRRLARASRWKDAIEAFRGM----ERFGVKKDTLAMNTLMDALVKENSVEHANDVF 246
Query: 167 LSLPDT-LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
+ D+ L + + L++ + +AR NA + +M++ G+ + Y ++ Y + K
Sbjct: 247 VEFKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREK 306
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++ +V S+++EM+EKG +V +Y I + + G K V+E MK V P+ + +
Sbjct: 307 DFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCV-PDTSFY 365
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR- 344
S++ + K G+++ A + + + D + Y+ ++S ++E+ ++
Sbjct: 366 SSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEE 425
Query: 345 -SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
S P + Y ++ R ++ + + S + +L++ K G
Sbjct: 426 SSCKPDLNT--YSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKL 483
Query: 404 DKAEAFFNSIIEEGGKPNSTS 424
+ A FF ++ +G P +
Sbjct: 484 EHACLFFEEMVSKGLVPKDCT 504
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 127/271 (46%), Gaps = 5/271 (1%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D +Y ++ + RA + +A + D+M G + YN ++ K + + E
Sbjct: 13 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 72
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+++EM+E+G+ D+ ++ + +G +K +F+ M +++ + P+ T++T+
Sbjct: 73 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM-LNQRLRPDIVTYNTLIDGM 131
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGV 350
+ G ++KA + + SR + V Y L+ + G+ E+ + + + + + P +
Sbjct: 132 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 191
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y+++I R G++ +K ++ + K S D N ++ Y+KE A
Sbjct: 192 --MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 249
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N + +E +P+ ++ L G + EA
Sbjct: 250 NMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 280
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 117/287 (40%), Gaps = 38/287 (13%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y LLN + R +AE L+++MR++G + ++ Y + D+
Sbjct: 47 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 106
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK------------------ 273
+ M + +R D+ +YN + QG +K +++ M
Sbjct: 107 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 166
Query: 274 ----------------VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
++K + PN T++++ Y + G V K ++ L+++ D
Sbjct: 167 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 226
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
+ Y+ L+ Y K + +++ N+ V P V Y+ +I+ + G+++ IF
Sbjct: 227 ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVT--YNMLINGFSVHGNVQEAGWIF 284
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
E+ + D M++ +V GN +A + +++ G P+
Sbjct: 285 EKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331
>gi|356502612|ref|XP_003520112.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 697
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 159/349 (45%), Gaps = 28/349 (8%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V GAL+N++ +R A ++ +M KG + ++ YN +M + K + E + EM
Sbjct: 322 VLGALINSFCVEGLRRQALIIQSEMEKKGVSSSAIVYNTLMDAFCKSNHIEAAEGLFVEM 381
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK--- 294
K KGI+ +YNI + + + + +E + E M+ D + PN T+++ + Y K
Sbjct: 382 KAKGIKPIAATYNILMHAYSRRMQPKIVEKLLEEMQ-DVGLKPNATSYTCLIIAYGKQKN 440
Query: 295 MGQVEKAEESL--RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGV 350
M + A+ L ++V + T + Y L+ Y G E+ Y + ++ + P +
Sbjct: 441 MSDMAAADAFLKMKKVGVKPTSQS---YTALIHAYSVSGLHEKAYAAFENMQNEGIKPSI 497
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
Y ++++ GD + + +I++ +S K N+++ + K+G F +A
Sbjct: 498 ET--YTTLLNAFRHAGDAQTLMEIWKLMISEKVEGTGATFNILVDGFAKQGLFMEAREVI 555
Query: 411 NSIIEEGGKPNSTSWETL----AEG--HIRERRILEALSCLKGAFAAEGAKSWRPKPVNV 464
+ + G KP ++ L A G H + ++L+ ++ LK + + V V
Sbjct: 556 SEFGKVGLKPTVVTYNMLINAYARGGQHSKLPQLLKEMAVLKLKPDSVTYSTMIFAFVRV 615
Query: 465 INFFKA---------CEEESDMGSKEAFVALLRQPGYRKEKDYMSLIGL 504
+F +A + D GS + ALL RK KD+ SL+G+
Sbjct: 616 RDFRRAFFYHKQMIKSGQMMDGGSYQTLQALLETRPARKNKDWSSLLGI 664
>gi|302801852|ref|XP_002982682.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
gi|300149781|gb|EFJ16435.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
Length = 414
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 159/394 (40%), Gaps = 53/394 (13%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
+ K L V+ +LR ++ A E+ DWM R + F + SD + L+L+ ++ +
Sbjct: 1 MEKKHLLNVIYKLRITAKFGQAREICDWMI-RNKVFEIEESDHVLLLELVGRISKFQATR 59
Query: 164 DFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
F+ +P L+ Y A+L + R AE + +M+ PYN+M+ +Y +
Sbjct: 60 CFW-EMPAELRSEAAYTAMLQVFARWHAIPAAEDTMSEMKSLNLITRVEPYNIMLDMYKR 118
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
E D+V +M E+ G+ D ++Y I L + G + +E +V K ++ T
Sbjct: 119 KNEDDKVRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGFDGIEA-----EVRKFLDEQLT 173
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
+ + Y +L +Y + + + ++
Sbjct: 174 SRQPLFI-----------------------------YECMLRIYTLLRDLTAIENLRSIL 204
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
F ++ Y+ ++ + ++G++E E++F E + K + + + M++ Y G
Sbjct: 205 LKTFKKFSSSSYNCLLDAYRQLGEVERAERLFNE-IGNKFTLNIQSYRAMIAVYASNGRM 263
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSW------ 457
+KA + + G + + + + G+I R AL + K+W
Sbjct: 264 EKANELYKQLFRAGFECHPAIYHAMVAGYIDARDHSNAL--------IQYGKAWDRSLLG 315
Query: 458 RPKPVNVINF--FKACEEESDMGSKEAFVALLRQ 489
PKP+ + E+ D E+ V L++
Sbjct: 316 HPKPLRATTLLVLRVLAEQGDFSRAESIVRDLKR 349
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 15/278 (5%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDT VY ++N V++ A L+D M+++ Y ++ K +
Sbjct: 700 VPDTF----VYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLE 755
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
E +M ++M E+G DV +Y + G G +F M + V P+ T+S++
Sbjct: 756 EAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCV-PDVVTYSSL 814
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY----- 343
K G+VE+A S+ + Y SL S GKK V R L+
Sbjct: 815 IDSLGKEGRVEEAYYFFENSISKGCTPNVGVYS---SLIDSFGKKGMVDRALELFEEMQR 871
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
R P + Y+ ++S LA+ G + EK+ EE V D N+++ K G
Sbjct: 872 RQCPPNIVT--YNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMV 929
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D+AE++F + E+G P+ ++ +L E + ++LEA
Sbjct: 930 DEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEA 967
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 118/271 (43%), Gaps = 11/271 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ L++A V++ A + M++ + + + Y ++ K +E + EMK
Sbjct: 325 FTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMK 384
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E D +YN + G G + G+F+ MK D+ + PN T++ M ++ K G+
Sbjct: 385 ENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMK-DRGLVPNLRTYNIMISVLGKAGRQ 443
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+A + ++ + D Y+ L+ + G G+ ++V ++ + G +
Sbjct: 444 PEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVL-------AIIKEMVEKGGECI 496
Query: 359 I---SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
I S+ G IEG ++ E S N +MS ++ G+ D+A + +
Sbjct: 497 ISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKK 556
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLK 446
P ++ TL +G + R+ EA+S L+
Sbjct: 557 HECIPTVVTYTTLVDGLGKAGRLDEAVSLLR 587
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY +L++++ + M A L ++M+ + + + YN +++ K + E ++ EM
Sbjct: 845 VYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEM 904
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ G D+ +YNI + G G ++ E F+ MK +K + P+ TF+++ K+ +
Sbjct: 905 EKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMK-EKGIVPDVITFTSLIESLGKVDK 963
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
+ +A E +E V Y+ L+ + G GK E +++
Sbjct: 964 LLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFH 1007
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 125/300 (41%), Gaps = 34/300 (11%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ +A A L +M+D+G + YN+M+++ K E +
Sbjct: 391 DAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLF 450
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM---------------------- 272
++KE+G DV++YN + G G +K+ + + M
Sbjct: 451 HDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIE 510
Query: 273 KVDKAVN-PNW-------TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
D+ V P+ T++T+ + +I G V++A + L ++ V Y L+
Sbjct: 511 GADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLV 570
Query: 325 SLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
G G+ +E + + P V Y ++++S + E +F+E +
Sbjct: 571 DGLGKAGRLDEAVSLLREMEKQGCEPSVVT--YSSLMASFYKRDQEEESLSLFDEMVRKG 628
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
D +L+++ K + D+A F + EEG +P +++TL +++ +I AL
Sbjct: 629 CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFAL 688
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 147/353 (41%), Gaps = 35/353 (9%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRGERFR---LSASDAAIQ-----LDLIAKVHGVASA 162
R+ + + FR + H+ ++ E + S D + +D + K + A
Sbjct: 282 RIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEA 341
Query: 163 EDFFLSLPDTLKDRRV--YGALLNAYVRA-RMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
FF + + V Y L+N +A R+ E+ ++ M++ + ++ YN ++
Sbjct: 342 CKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVE-MKENNCSPDAIAYNTLID 400
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
K E D + EMK++G+ ++ +YNI +S G G + +F +K AV
Sbjct: 401 GLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAV- 459
Query: 280 PNWTTFSTMATMYIKMGQVEKA----EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
P+ T++T+ + K GQ++K +E + + I RD S G G E
Sbjct: 460 PDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRD--------SNAGHEGTIEG 511
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE-----EWLSVKSSYDPRIA 390
R F + + Y+ ++S+ G ++ K+ E E + +Y +
Sbjct: 512 ADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVD 571
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
L K G D+A + + ++G +P+ ++ +L + + E+LS
Sbjct: 572 GLG-----KAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLS 619
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/406 (19%), Positives = 158/406 (38%), Gaps = 83/406 (20%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+V L K R + A EV+ M + S AI + + G A D L
Sbjct: 363 LVNGLAKAGRLEEACEVFVEMKEN------NCSPDAIAYNTLIDGLGKAGEADMACGLFK 416
Query: 172 TLKDR------RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
+KDR R Y +++ +A + A L ++++G YN ++ + K
Sbjct: 417 EMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGG 476
Query: 226 EYDEVESMVSEMKEKGIR-------------------------------LDVYSYNIWLS 254
+ D+V +++ EM EKG L +YN +S
Sbjct: 477 QMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMS 536
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ G ++ + E+MK + + P T++T+ K G++++A LR +E +
Sbjct: 537 AFIHNGHVDEAVKLLEVMKKHECI-PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCE 595
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDI---- 368
V Y L++ + ++EE +++ + + V+ Y +I+ L + D+
Sbjct: 596 PSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVST--YSLVINCLCKSDDVDQAL 653
Query: 369 --------EGMEKIFEEWLSVKSSY-----------------------DPRIANLMMSWY 397
EGME + + ++ SS D + N+M++
Sbjct: 654 DVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGL 713
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
VK D+A +S+ + P+ ++ +L +G + R+ EA +
Sbjct: 714 VKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFN 759
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 110/251 (43%), Gaps = 3/251 (1%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+LL + A + ++M+ G + YN ++ L +K Y + ++ +
Sbjct: 222 SLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQF 281
Query: 241 GIRLDVYSYNIWLSSCGSQGSTE-KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
I+ D ++ I++ S G + E + E++K ++P TF+ + +K G ++
Sbjct: 282 RIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIK--SGIDPGVHTFTVLIDALVKSGNID 339
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
+A + +++ + V Y L++ G+ EE V+ + + Y+ +I
Sbjct: 340 EACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLI 399
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
L + G+ + +F+E + R N+M+S K G +A F+ + E+G
Sbjct: 400 DGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAV 459
Query: 420 PNSTSWETLAE 430
P+ ++ TL +
Sbjct: 460 PDVFTYNTLID 470
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 113/264 (42%), Gaps = 1/264 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+ ++ + + L D+M KG Y++++ K + D+ + MK
Sbjct: 601 YSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMK 660
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E+G+ + +Y LSS + +F ++ + ++ P+ ++ M +K +V
Sbjct: 661 EEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQ-ESSLVPDTFVYNIMVNGLVKSNRV 719
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
++A + + ++++ D Y LL G G+ EE + ++ + Y ++
Sbjct: 720 DEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSL 779
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ L + G + IF + D + ++ KEG ++A FF + I +G
Sbjct: 780 MDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGC 839
Query: 419 KPNSTSWETLAEGHIRERRILEAL 442
PN + +L + ++ + AL
Sbjct: 840 TPNVGVYSSLIDSFGKKGMVDRAL 863
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D Y L++ + M AE +M++KG + + ++ K+ + E
Sbjct: 910 VPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACE 969
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA-TM 291
+ M+E+G V +YN+ + G G + +F MKV K P+ T M +
Sbjct: 970 LFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKV-KGCMPDGITIGIMKRIL 1028
Query: 292 YIKMGQVEKAEESLR 306
++ Q EE LR
Sbjct: 1029 SVREQQFHALEEGLR 1043
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 129/274 (47%), Gaps = 16/274 (5%)
Query: 178 VYGALLNAYVRARMRGN---AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
Y L++ + + G A+ ++ +M + + +N ++ + K + ++
Sbjct: 237 TYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAF 296
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+ +G++ ++ +YN ++ + G ++ +++ M V + PN TF+ + + K
Sbjct: 297 EEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKM-VGLGLKPNIVTFNALINGFCK 355
Query: 295 MGQVEKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWN--LYRSVFP 348
+++A R++ I +D VP ++ ++ + G EE + + N L +FP
Sbjct: 356 KKMIKEA----RKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFP 411
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
V+ Y+ +I+ L R ++ +K+ E + + D N+++ + K+G KAE
Sbjct: 412 NVST--YNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEK 469
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ G KPN ++ TL +G+ E + AL
Sbjct: 470 LLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 121/263 (46%), Gaps = 4/263 (1%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LL+A V+ G + + +M + + +N+ + K + ++ E ++ ++K G
Sbjct: 171 LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWG 230
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKM---EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++ +YN + +GS KM + + + M +K + PN TF+T+ + K V
Sbjct: 231 FSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANK-ICPNEITFNTLIDGFCKDENV 289
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
A+ + ++ + + V Y+ L++ + GK +E +W+ + + ++A+
Sbjct: 290 LAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNAL 349
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I+ + I+ K+F++ + N M+ + K G ++ A NS+++EG
Sbjct: 350 INGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGI 409
Query: 419 KPNSTSWETLAEGHIRERRILEA 441
PN +++ L G R + + A
Sbjct: 410 FPNVSTYNCLIAGLCRNQNVRAA 432
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 108/251 (43%), Gaps = 1/251 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +L+N A L DKM G + + +N ++ + K K E + ++
Sbjct: 310 TYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDI 369
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E+ + + ++N + + G E+ + M +D+ + PN +T++ + +
Sbjct: 370 AEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSM-LDEGIFPNVSTYNCLIAGLCRNQN 428
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
V A++ L +E+ D V Y+ L+ + G+ + ++ +V ++ Y+
Sbjct: 429 VRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNT 488
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ G+++ K+ + + N+++ + K G + A N ++E+G
Sbjct: 489 LMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKG 548
Query: 418 GKPNSTSWETL 428
PN T+++ +
Sbjct: 549 LNPNRTTYDVV 559
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSL 169
++ L + A+ ++D M G + + +A I + K + A F ++
Sbjct: 314 LINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALI--NGFCKKKMIKEARKLFDDIAE 371
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D + + + +++A+ +A M L + M D+G + YN ++ + +
Sbjct: 372 QDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRA 431
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ +++EM+ ++ DV +YNI + G K E + M ++ V PN T++T+
Sbjct: 432 AKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEM-LNVGVKPNHVTYNTLM 490
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
Y G ++ A + ++E + V Y+ L+ + GK E+ R+ N
Sbjct: 491 DGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLN 542
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ + + AE L+ +M + G + + YN +M Y +
Sbjct: 447 DVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVR 506
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M+++G R +V +YN+ + G E + M ++K +NPN TT+ + ++
Sbjct: 507 TQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEM-LEKGLNPNRTTYDVVRLEMLE 565
Query: 295 MGQVEKAEESLRRVES 310
G + E L + S
Sbjct: 566 KGFIPDIEGHLYNISS 581
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ ++S+L + + M+ +++E + + + N+ ++ K G +KAE I
Sbjct: 169 NPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKA 228
Query: 416 EGGKPNSTSWETLAEGHIRE---RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA-C 471
G PN ++ TL +GH ++ ++ A + LK A + P + C
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKIC----PNEITFNTLIDGFC 284
Query: 472 EEESDMGSKEAFVALLRQPGYRKEKDYMSLI------GLTDEAVA 510
++E+ + +K AF + RQ Y SLI G DEA+A
Sbjct: 285 KDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIA 329
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 7/289 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ AYVRA A +I+ M KG +++ Y ++ Y K + DE +
Sbjct: 350 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 409
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MKE G + +YN LS G + + +M + MK + +PN T++TM +
Sbjct: 410 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN-GCSPNRATWNTMLALCGN 468
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNL 353
G + R ++S DR ++ L+S YG G + + +++ + R+ F
Sbjct: 469 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 528
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+A++++LAR GD E + + S +LM+ Y K GN+ E N I
Sbjct: 529 -YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
E P+ TL + + R AL+ + AF ++P V
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCR----ALAGSERAFTLFKKHGYKPDMV 632
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 125/304 (41%), Gaps = 36/304 (11%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++AY +A A L M++ G ++ YN +++L K +E+ M+ +M
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K G + ++N L+ CG++G + + VF MK P+ TF+T+ + Y + G
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMK-SCGFEPDRDTFNTLISAYGRCGS 506
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
A + + Y+ LL+ G V + +S T Y
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 358 MISSLARIGDIEGMEK---------IFEEWLSVKS------------------------S 384
M+ A+ G+ G+E+ IF W+ +++
Sbjct: 567 MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG 626
Query: 385 YDPR--IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
Y P I N M+S + + +D+AE SI E+G P+ ++ +L + ++R +A
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAE 686
Query: 443 SCLK 446
LK
Sbjct: 687 EILK 690
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 139/322 (43%), Gaps = 14/322 (4%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHG-VASAEDFFLSLPDTLK----- 174
+Y+ A+++++ M G S + ++I V G + + L + D ++
Sbjct: 225 KYEKAIDLFERMKEMG------PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLK 278
Query: 175 -DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
D +L+A R + A+ +++ GY ++ YN ++ ++ K Y E S+
Sbjct: 279 FDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSV 338
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EM+E D +YN +++ G +++ GV E+M K V PN T++T+ Y
Sbjct: 339 LKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM-TKKGVMPNAITYTTVIDAYG 397
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G+ ++A + ++ + Y+ +LSL G + E+ ++ +S
Sbjct: 398 KAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRA 457
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
++ M++ G + + ++F E S D N ++S Y + G+ A + +
Sbjct: 458 TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 414 IEEGGKPNSTSWETLAEGHIRE 435
G T++ L R+
Sbjct: 518 TRAGFNACVTTYNALLNALARK 539
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 111/273 (40%), Gaps = 40/273 (14%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ALLNA R + E +I M+ KG+ Y++M+ Y K Y +E + + +
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587
Query: 238 KE-----------------------------------KGIRLDVYSYNIWLSSCGSQGST 262
KE G + D+ +N LS
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMY 647
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
++ EG+ E ++ D ++P+ T++++ MY++ G+ KAEE L+ +E D V Y+
Sbjct: 648 DQAEGILESIRED-GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT 706
Query: 323 LLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
++ + G +E R+ + R + P + Y+ +S +G +E + E
Sbjct: 707 VIKGFCRRGLMQEAVRMLSEMTERGIRPCI--FTYNTFVSGYTAMGMFAEIEDVIECMAK 764
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+ +++ Y + G + +A F + I
Sbjct: 765 NDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 145/349 (41%), Gaps = 36/349 (10%)
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
S+++ P G + + + L + +L +VK L ++ A+ +++W+
Sbjct: 114 SIVEQPLTGLSRFFDSVKS---ELLRTDLVSLVKGLDDSGHWERAVFLFEWL-------V 163
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
LS++ A++LD H V + F+ R+ G R A L+D
Sbjct: 164 LSSNSGALKLD-----HQVI---EIFV---------RILG-------RESQYSVAAKLLD 199
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
K+ + Y + Y ++ Y + +Y++ + MKE G + +YN+ L G G
Sbjct: 200 KIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG 259
Query: 261 -STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
S K+ GV + M+ K + + T ST+ + + G + +A+E ++S V
Sbjct: 260 RSWRKILGVLDEMR-SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
Y+ LL ++G G E V ++ Y+ ++++ R G + + E
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ ++ Y K G D+A F S+ E G PN+ ++ +
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 101/256 (39%), Gaps = 23/256 (8%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M+ G+ +N +++ Y + + M EM G V +YN L++ +G
Sbjct: 481 EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
E V MK K P T++S M Y K G E R+E+RI P
Sbjct: 541 DWRSGENVISDMK-SKGFKPTETSYSLMLQCYAKGGNYLGIE----RIENRIKEGQIFPS 595
Query: 321 HYLL-----------SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
LL +L GS R + L++ + +++M+S R +
Sbjct: 596 WMLLRTLLLANFKCRALAGS-------ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
E I E S D N +M YV+ G KAE ++ + KP+ S+ T+
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVI 708
Query: 430 EGHIRERRILEALSCL 445
+G R + EA+ L
Sbjct: 709 KGFCRRGLMQEAVRML 724
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 77/171 (45%), Gaps = 36/171 (21%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK----------- 223
D ++ ++L+ + R M AE +++ +R+ G + + YN +M +Y++
Sbjct: 630 DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEIL 689
Query: 224 ------------------IKEY------DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
IK + E M+SEM E+GIR +++YN ++S +
Sbjct: 690 KTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAM 749
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
G ++E V E M + PN TF + Y + G+ +A + + ++++
Sbjct: 750 GMFAEIEDVIECMAKNDC-RPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 163/387 (42%), Gaps = 13/387 (3%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRR 177
+++ A E+ +WM G+ F ++ +AK ++ A F +P+ D
Sbjct: 138 KQFDKAKELLNWM--WGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 195
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVH-SLP-YNVMMTLYMKIKEYDEVESMVS 235
Y L++ + + NA + +++ KG +V+ ++P YNVM+ K ++DE +
Sbjct: 196 CYNILIDGFFKKGDILNASEIWERLL-KGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 254
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
MK+ D+Y+Y+ + G+ + V++ M + V+P+ ++TM Y++
Sbjct: 255 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM-AENGVSPDVVVYNTMLNGYLRA 313
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G++E+ E L +V + R V Y+ L+ K +E +W L ++ Y
Sbjct: 314 GRIEECLE-LWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTY 372
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
++ L + G + I EE + + D + M++ +EG D+ + + +
Sbjct: 373 GVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK 432
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEES 475
G KPN + G +R ++ +AL F +K P V +
Sbjct: 433 HGCKPNPYVCNAVINGFVRASKLEDALR----FFGNMVSKGCFPTVVTYNTLINGLSKAE 488
Query: 476 DMGSKEAFVALLRQPGYRKEKDYMSLI 502
A V + Q G++ SL+
Sbjct: 489 RFSEAYALVKEMLQKGWKPNMITYSLL 515
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 123/268 (45%), Gaps = 3/268 (1%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y +LLNA + + AE G + + YN+++ + + K++D+ + +++
Sbjct: 90 RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNW 149
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M +G DV+SY ++S G +F+ M ++ V P+ ++ + + K G
Sbjct: 150 MWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMP-ERGVTPDVACYNILIDGFFKKG 208
Query: 297 QVEKAEESLRRVESRITGRDRVP-YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+ A E R+ + +P Y+ +++ GK +E + +W+ + G Y
Sbjct: 209 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 268
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I L G+++G ++++E S D + N M++ Y++ G ++ + ++E
Sbjct: 269 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW-KVME 327
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
+ G S+ L G ++ EA+S
Sbjct: 328 KEGCRTVVSYNILIRGLFENAKVDEAIS 355
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 126/299 (42%), Gaps = 13/299 (4%)
Query: 162 AEDFFLSLPDTL---KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
AE FFL +T+ + + Y L+ R + A+ L++ M +G++ Y ++
Sbjct: 108 AESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLI 166
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
K + + EM E+G+ DV YNI + +G ++E + +V
Sbjct: 167 NSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSV 226
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
PN +++ M K G+ +++ E R++ G+D Y L+ G + R
Sbjct: 227 YPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATR 286
Query: 339 VWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMM 394
V+ V P V + Y+ M++ R G I E+ E W ++ + N+++
Sbjct: 287 VYKEMAENGVSPDV--VVYNTMLNGYLRAGRI---EECLELWKVMEKEGCRTVVSYNILI 341
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG 453
+ D+A + + + E+ +S ++ L G + + +ALS L+ A G
Sbjct: 342 RGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG 400
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 5/216 (2%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ S+L + E G L + ++ L + R V D M G + +A I
Sbjct: 388 ALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVI- 446
Query: 150 LDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+ + + A FF ++ Y L+N +A A L+ +M KG+
Sbjct: 447 -NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGW 505
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ + Y+++M + K+ D ++ + EKG + DV +NI + S G E
Sbjct: 506 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 565
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
++ MK V PN T +T+ + K+ E+A +
Sbjct: 566 LYSEMKQRNCV-PNLVTHNTLMEGFYKVRDFERASK 600
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 100/265 (37%), Gaps = 36/265 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V A++N +VRA +A M KG + YN ++ K + + E ++V EM
Sbjct: 441 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 500
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+KG + ++ +Y++ ++ QG M ++K P+ + + G+
Sbjct: 501 LQKGWKPNMITYSLLMNGL-CQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 559
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
VE A L LY + + R+ P + ++
Sbjct: 560 VEDA----------------------LQLYSEMKQ-----------RNCVPNLVT--HNT 584
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ ++ D E KI++ L D N+ + A F N ++ G
Sbjct: 585 LMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 644
Query: 418 GKPNSTSWETLAEGHIRERRILEAL 442
P + +W L +G++ + +E +
Sbjct: 645 VLPTAITWNILVQGYLALKGYMEPV 669
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 2/266 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L++AY ++ AE L +M+ KG +N++M Y + + + VE +++EM
Sbjct: 368 VYNTLMDAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEM 427
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEG-VFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+E G++ + SY +S+ G Q + M F MK D + P +++ + Y G
Sbjct: 428 QETGLKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKD-GIKPTSHSYTALIHAYSVSG 486
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
EKA + ++ Y LL + G + + ++W L R T + ++
Sbjct: 487 WHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTRVTFN 546
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ A+ G + + ++ +V N++M+ Y + G K +
Sbjct: 547 TLVDGFAKHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPELLEEMAAH 606
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
KP+S ++ T+ +R R +A
Sbjct: 607 NLKPDSVTYSTMIYAFLRVRDFSQAF 632
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 138/326 (42%), Gaps = 8/326 (2%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD 175
L K R + A+EVY M ER R + + +++ K SA F +
Sbjct: 59 LLKARCAEKAVEVYQRMKR--ERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCK 116
Query: 176 RRV--YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
+ Y AL+NA+ R + AE + ++M+ G+ YN +M Y + +
Sbjct: 117 ANICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEI 176
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
S M+ G D SYNI + + G G + E VFE +K + + P + + +
Sbjct: 177 FSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLK-RQGMAPTMKSHMLLLAAHA 235
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+ G V + EE + ++ D + + +L+ YG G+ +++ R+ G ++
Sbjct: 236 RSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMER--RGTRDV 293
Query: 354 G-YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
G Y+ +++ R G +E ME F + D M Y ++ + + F
Sbjct: 294 GTYNVAVNAYGRAGYLERMEAAFASLERRGLAADVVTWTSRMGAYARKKEYRRCLEIFEE 353
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRI 438
+++ G P++ + + L ER++
Sbjct: 354 MVDAGCYPDAGTAKVLVAACSDERQV 379
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 1/246 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY A L+ ++AR A + +M+ + ++ Y +M+ +Y K K+ + EM
Sbjct: 51 VYNAYLDGLLKARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEM 110
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G + ++ +Y +++ +G EK E VFE M+ P+ ++ + Y + G
Sbjct: 111 QSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNALMEAYSRAGF 169
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ A E ++ DR Y+ L+ YG G E V+ + T +
Sbjct: 170 PQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHML 229
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++++ AR G++ E++ + + D N M++ Y + G D E ++ G
Sbjct: 230 LLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRG 289
Query: 418 GKPNST 423
+ T
Sbjct: 290 TRDVGT 295
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 105/261 (40%), Gaps = 1/261 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL AY A AE +I +MR+ G + YN + +K + ++ + M
Sbjct: 16 TYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQRM 75
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K + R + +Y + ++ G VF+ M+ N T++ + + + G
Sbjct: 76 KRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQ-SIGCKANICTYTALVNAFAREGL 134
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
EKAEE ++ D Y+ L+ Y G + +++L + + Y+
Sbjct: 135 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNI 194
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ + R G E +FE + + L+++ + + GN + E + + G
Sbjct: 195 LVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSG 254
Query: 418 GKPNSTSWETLAEGHIRERRI 438
P++ + + + R R+
Sbjct: 255 LAPDTIALNAMLNAYGRAGRL 275
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 169/381 (44%), Gaps = 29/381 (7%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP- 170
++ +L + RR++ + + NR R + A IQ K H V + F +P
Sbjct: 87 LIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQH--YGKAHLVEKGIELFHQMPS 144
Query: 171 -DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ + + + LLN V A + + + + +S+ YN+M+ ++K +++
Sbjct: 145 FNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSVSYNIMIKGWIKKGGWEQ 204
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ EM EKG++ V +YN +L +G + +F+ M +K +PN T++ +
Sbjct: 205 ACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNM-TEKGHHPNAVTYALLM 263
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVF 347
+ +G+ ++A++ + +E V Y L++ G G +E+ + N R +
Sbjct: 264 EGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLK 323
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LMMSWYVKEGNFDK 405
P V Y+ +++ L + G + K+ + + V DP A +M+ Y G+FD
Sbjct: 324 PDVVT--YNILVNYLCKEGKVGDAYKVLVK-MQVGGC-DPNAATYRMMIDGYCNAGDFDG 379
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERR-------ILEALSCLKGAFAAEGAKSWR 458
A N+++ G P+ ++ +L G ++ +LE + + F AE +WR
Sbjct: 380 AMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDAE---TWR 436
Query: 459 PKPVNVINFFKACEEESDMGS 479
I C + ++GS
Sbjct: 437 ------ILIMDVCGQHVEIGS 451
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/291 (16%), Positives = 118/291 (40%), Gaps = 40/291 (13%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+ R+R E ++ +R++ + + ++ Y K ++ + +M
Sbjct: 84 YSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKGIELFHQMP 143
Query: 239 EKGIRLDVYSYNIWLSS---CGS--------------------------------QGSTE 263
+ S+N+ L++ C +G E
Sbjct: 144 SFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSVSYNIMIKGWIKKGGWE 203
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+ +F+ M ++K V P+ T+++ + + G+++ A + + + + V Y L
Sbjct: 204 QACNLFDEM-LEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALL 262
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPG--VTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+ + +GK +E ++ ++ F G + + Y +++ L + G+I+ ME + E
Sbjct: 263 MEGWCFIGKYKEAKKL--MFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKR 320
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ D N+++++ KEG A + G PN+ ++ + +G+
Sbjct: 321 RLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGY 371
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 118/259 (45%), Gaps = 5/259 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR G+L+N + R +A L+DKM + GY + YN ++ K + ++
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFF 213
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KGIR +V +Y ++ + G + M + + + PN T+S + ++K
Sbjct: 214 KEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDM-IKRKITPNVITYSALLDAFVK 272
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
G+V +A+E + D V Y L++ + +E ++++L + FP V +
Sbjct: 273 NGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVS 332
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I+ + +E K+F + + N ++ + + G+ DKA+ FF+
Sbjct: 333 --YNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQ 390
Query: 413 IIEEGGKPNSTSWETLAEG 431
+ G P+ ++ L G
Sbjct: 391 MDSFGVSPDIWTYNILLGG 409
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 5/174 (2%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
PD + Y L+N + +A+ + L KM +G +++ YN ++ + ++ +
Sbjct: 326 CFPDVVS----YNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDV 381
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
D+ + S+M G+ D+++YNI L G EK +FE M+ ++ + T++T
Sbjct: 382 DKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQ-KSEMDLDIVTYTT 440
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
+ K G+VE A + + D V Y ++S + G + EV ++
Sbjct: 441 VIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYT 494
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 118/267 (44%), Gaps = 42/267 (15%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELM 272
+N +++ +K+K+YD V S+ +M+ GIR D+Y++NI ++ C + + + +++
Sbjct: 88 FNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKML 147
Query: 273 K-----------------------------VDKAVN----PNWTTFSTMATMYIKMGQVE 299
K VDK V P+ ++ + K +V
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVN 207
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
A + + + + + V Y L++ + G+ + R+ + R + P V + Y A
Sbjct: 208 DALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNV--ITYSA 265
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIE 415
++ + + G + ++IFEE V+ S DP I +++ D+A F+ ++
Sbjct: 266 LLDAFVKNGKVLEAKEIFEEM--VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
+G P+ S+ TL G + +R+ + +
Sbjct: 324 KGCFPDVVSYNTLINGFCKAKRVEDGM 350
>gi|41393251|gb|AAS01974.1| putative chloroplastic RNA-binding protein, with alternative
splicing isoforms [Oryza sativa Japonica Group]
gi|108712189|gb|ABF99984.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 884
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 52/289 (17%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y A+L+ Y + M+ L D+ R G+ + + V+ ++ + +YD ++
Sbjct: 239 VLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQ 298
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EM+E GI+ +++ YN L + G G +FE M + V PN T + +A +
Sbjct: 299 FVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMTAE-GVEPNARTLTALAKI 357
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
Y GR R +G + ++W R
Sbjct: 358 Y---------------------GRAR---------WG-----RDALQLWEQMREKKLPAD 382
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL----------MMSWYVKEG 401
N+ + ++S A +G + E++F E DP + ++ M++ Y G
Sbjct: 383 NILCNTLLSMCADVGLVGEAEQLFSEM------KDPDLGDVPKPDKWSYTAMINIYGSSG 436
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
+ D+A F ++E G +PN S+ + + + RI EA+ L+ A
Sbjct: 437 DADRALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMA 485
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 114/295 (38%), Gaps = 51/295 (17%)
Query: 145 DAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELL--IDKM 202
DAA DL +H DFF P LL Y+ R + LL + +
Sbjct: 116 DAA---DLAPTLH------DFF---PPASPPSTSDALLLLNYLHPSWRKSLSLLCWLRAL 163
Query: 203 RDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST 262
D + + ++ +NV + +++ + E + +M G+ LD NI
Sbjct: 164 PDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLD----NI----------- 208
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV-ESRITGRDRVPYH 321
T+ST+ T + Q +KA E R+ S D V Y
Sbjct: 209 ---------------------TYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYS 247
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+L +Y +G KEEV +++ R ++ + + GD +G++ +F+E V
Sbjct: 248 AILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREV 307
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ + N ++ K G A F + EG +PN+ + LA+ + R R
Sbjct: 308 GIKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRAR 362
>gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 535
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 12/267 (4%)
Query: 173 LKDRRVYGALLNAYV-RARMRGNAELLIDKMRDKGYAVHS------LP----YNVMMTLY 221
L D Y L++AY R G +L + +G V LP Y +MT Y
Sbjct: 239 LPDVVTYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAY 298
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
+ + E+++ M+E I +V +Y + +++ +G + EGV M + V PN
Sbjct: 299 AAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRM-ISAYVAPN 357
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
T++T+ Y G AEE L R+E+ + + L+++Y + G+ E V
Sbjct: 358 ANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLA 417
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ G T + + ++++ GD+ G E++ + P N +M+ Y +G
Sbjct: 418 RMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADKG 477
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ AE + +G P+ T+ TL
Sbjct: 478 DVAGAEGVLARMRAKGVGPDETTLSTL 504
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 15/253 (5%)
Query: 163 EDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
E+ LP+ + Y L+ AY +E ++++M + A + + Y V+MT Y
Sbjct: 279 EEVLRVLPNVM----TYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYT 334
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
+ E ++ M + + +Y L + G+ E V M+ V P
Sbjct: 335 LRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLARMEA-AGVLPTA 393
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRV 339
TF+T+ T+Y G+VE A+ L R+E+ G + + LL+ Y G VG E+V R
Sbjct: 394 LTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRR 453
Query: 340 --WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
Y FP L Y+ +++ A GD+ G E + + D + ++ Y
Sbjct: 454 REAEAYPD-FP----LTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAY 508
Query: 398 VKEGNFDKAEAFF 410
+ G+ AEA
Sbjct: 509 AEAGDPLGAEAVL 521
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 64/167 (38%), Gaps = 36/167 (21%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL+AY AE ++ +M G +L + +MT+Y E + + +++ M
Sbjct: 360 TYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARM 419
Query: 238 KEKGIR---------LDVY--------------------------SYNIWLSSCGSQGST 262
+ G+ L+ Y +YN ++ +G
Sbjct: 420 EAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADKGDV 479
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
EGV M+ K V P+ TT ST+ Y + G AE L RV+
Sbjct: 480 AGAEGVLARMRA-KGVGPDETTLSTLLHAYAEAGDPLGAEAVLLRVQ 525
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 151/356 (42%), Gaps = 9/356 (2%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
SVL K G L L ++K L + ALE +D + +G F L ++
Sbjct: 134 SVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG--FLLDEVTYGTLIN 191
Query: 152 LIAKVHGVASAEDFFLSLPDTL--KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+ K+ A + + + + +Y +++ + + A L + +G
Sbjct: 192 GLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDP 251
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
Y ++ + + ++ EV ++ +M ++ + L+VY+YNI + + +G K +
Sbjct: 252 DVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMR 311
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
LM +++ P+ TF+T+ + Y V +A + D Y+ L+ Y
Sbjct: 312 NLM-IERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCK 370
Query: 330 VGKKEEVYRVWNL--YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
+ +E ++N Y+ + P + Y ++I L + G I ++F S +
Sbjct: 371 NNRIDEALSLFNKMNYKKLAPNIVT--YSSLIDGLCKSGRISYAWELFSAIHDGGPSPNV 428
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
N+M+ K DKA FN + E G PN +S+ L G+ + +RI EA++
Sbjct: 429 ITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMN 484
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 6/244 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++A + M G A + + M ++G + +N +M+ Y + E +
Sbjct: 291 YNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFA 350
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E GI DV+SYNI + ++ +F M K + PN T+S++ K G++
Sbjct: 351 ECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNY-KKLAPNIVTYSSLIDGLCKSGRI 409
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYH 356
A E + + + Y+ +L + ++ ++NL R + P V++ Y+
Sbjct: 410 SYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSS--YN 467
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I+ + I+ +FEE D N ++ K G A FN ++ +
Sbjct: 468 ILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFN-VMHD 526
Query: 417 GGKP 420
GG P
Sbjct: 527 GGPP 530
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+ Y + A L +KM K A + + Y+ ++ K + S +
Sbjct: 361 YNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIH 420
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G +V +YNI L + +K +F LM ++ + PN ++++ + Y K ++
Sbjct: 421 DGGPSPNVITYNIMLDALCKIQLVDKAIELFNLM-FERGLTPNVSSYNILINGYCKSKRI 479
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
++A + R D V Y+ L+ G+ + ++N+ P V + Y+ +
Sbjct: 480 DEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNIL 539
Query: 359 ISSLARI 365
+ ++I
Sbjct: 540 FDAFSKI 546
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 87/209 (41%), Gaps = 5/209 (2%)
Query: 66 ERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHA 125
+R ++ +N + L N + + + + + + G + W ++ K R A
Sbjct: 319 QRPDLVTFNTLMSGYCLY-NDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEA 377
Query: 126 LEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV--YGALL 183
L +++ MN + + + I D + K ++ A + F ++ D V Y +L
Sbjct: 378 LSLFNKMNYKKLAPNIVTYSSLI--DGLCKSGRISYAWELFSAIHDGGPSPNVITYNIML 435
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR 243
+A + ++ A L + M ++G + YN+++ Y K K DE ++ EM + +
Sbjct: 436 DALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLV 495
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
D +YN + G +F +M
Sbjct: 496 PDSVTYNCLIDGLCKSGRISHAWELFNVM 524
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 134/301 (44%), Gaps = 15/301 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL+N + + +A ++D+MR K ++ ++ YN+M+ + D ++
Sbjct: 153 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 212
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++ + V +Y I + + +G ++ + + M + + + P+ T++T+ K
Sbjct: 213 DQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEM-LSRGLKPDMFTYNTIIRGMCK 271
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G V++A E +R +E + D + Y+ LL + GK EE ++ S +
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331
Query: 355 YHAMISSLARIGDIEGMEKIF----EEWLSVKS-SYDPRIANLMMSWYVKEGNFDKAEAF 409
Y +I++L R G IE + E+ L+ + SYDP IA + +EG D A F
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA-----AFCREGRLDVAIEF 386
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFK 469
++I +G P+ ++ T+ + + +AL F G P + F
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLCKNGKADQALE----IFGKLGEVGCSPNSSSYNTMFS 442
Query: 470 A 470
A
Sbjct: 443 A 443
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 17/268 (6%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y LL A + E L+ KM + + + Y++++T + + +E
Sbjct: 292 PDVIS----YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 347
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+++ MKEKG+ D YSY+ +++ +G + E M D + P+ ++T+
Sbjct: 348 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL-PDIVNYNTVL 406
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K G+ ++A E ++ + Y+ + S S G K + + + V G
Sbjct: 407 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK--IRALHMILEMVSNG 464
Query: 350 V--TNLGYHAMISSLARIGDIEGM-EKIFEEWLSVKSS-YDPRIA--NLMMSWYVKEGNF 403
+ + Y++MIS L R EGM +K FE + ++S + P + N+++ + K
Sbjct: 465 IDPDEITYNSMISCLCR----EGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 520
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+ A +S++ G +PN T++ L EG
Sbjct: 521 EDAIDVLDSMVGNGCRPNETTYTVLIEG 548
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 129/307 (42%), Gaps = 8/307 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+D+M +G YN ++ K D M+ ++ KG DV SYNI L +
Sbjct: 246 LLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALL 305
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+QG E+ E + M +K +PN T+S + T + G++E+A L+ ++ + D
Sbjct: 306 NQGKWEEGEKLMTKMFSEKC-DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 364
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
Y L++ + G+ + S P + N Y+ ++++L + G + +IF
Sbjct: 365 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN--YNTVLATLCKNGKADQALEIF 422
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+ V S + N M S G+ +A ++ G P+ ++ ++ RE
Sbjct: 423 GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCRE 482
Query: 436 RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKE 495
+ +A L + E S + ++ F KA E + ++ V +P E
Sbjct: 483 GMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRP---NE 539
Query: 496 KDYMSLI 502
Y LI
Sbjct: 540 TTYTVLI 546
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 7/274 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++ + M A +I + KG + YN+++ + +++E E ++
Sbjct: 258 DMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 317
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M + +V +Y+I +++ G E+ + +LMK +K + P+ ++ + + +
Sbjct: 318 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK-EKGLTPDAYSYDPLIAAFCR 376
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+++ A E L + S D V Y+ +L+ GK ++ ++ V +
Sbjct: 377 EGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 436
Query: 355 YHAMISSLARIGD-IEGMEKIFEEWLSVKSSYDPR--IANLMMSWYVKEGNFDKAEAFFN 411
Y+ M S+L GD I + I E V + DP N M+S +EG DKA
Sbjct: 437 YNTMFSALWSSGDKIRALHMILE---MVSNGIDPDEITYNSMISCLCREGMVDKAFELLV 493
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ P+ ++ + G + RI +A+ L
Sbjct: 494 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVL 527
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 262 TEKMEGVFELMKVDKAV----------NPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
T+ ++G F L V KAV P+ ++ + + KM +++ A L R+ S+
Sbjct: 124 TKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 183
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
D V Y+ ++ S GK + +V + S T + Y +I + G ++
Sbjct: 184 DFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEA 243
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
K+ +E LS D N ++ KEG D+A ++ +G +P+ S+ L
Sbjct: 244 LKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNIL 300
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
D I+ SC S E + + E M V K NP+ + + + + V KA
Sbjct: 85 DTQMLKIFHRSCRSGNYIESLH-LLETM-VRKGYNPDVILCTKLIKGFFTLRNVPKAVRV 142
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
+ +E + D Y+ L++ + + + ++ RV + RS + Y+ MI SL
Sbjct: 143 MEILE-KFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 201
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
G ++ K+ ++ LS +++ + EG D+A + ++ G KP+ +
Sbjct: 202 RGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFT 261
Query: 425 WETLAEGHIRE 435
+ T+ G +E
Sbjct: 262 YNTIIRGMCKE 272
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 143/350 (40%), Gaps = 52/350 (14%)
Query: 151 DLIAKVHGVASAEDFFLSL----PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+LI V + ED F +L D D ++ L+ AYVR M K+ + G
Sbjct: 150 ELIKLVKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVG 209
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
+ N ++ +K+ D+ + EM GI
Sbjct: 210 CVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGI------------------------ 245
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
+PN TF+ + ++ + G V+K + L R+E D V Y+ L+S
Sbjct: 246 ------------HPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISC 293
Query: 327 YGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
Y G+ ++ + ++ + R+V P + + Y A+++ L + G + ++F + +
Sbjct: 294 YCRKGRLDDAFYLYRIMYRRNVLPDL--VSYTALMNGLCKEGKVREAHQLFHRMIHRGLN 351
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
D N ++ Y KEG ++ + + +I G P+ + + L EG+ +E RI+ AL+
Sbjct: 352 PDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALN- 410
Query: 445 LKGAFAAEGAKSWRPKPVNVINFFKA--CEEESDMGSKEAFVALLRQPGY 492
E + P ++ ++ CEE +K + + + Q GY
Sbjct: 411 ----LVVELERFGVPISTDIYDYLMVSICEEGRPFAAK-SLLQRISQRGY 455
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 114/271 (42%), Gaps = 17/271 (6%)
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
LLN ++ + +M G +S +N++ ++ + + D+V + M+E
Sbjct: 218 NCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEE 277
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--DKAVNPNWTTFSTMATMYIKMGQ 297
+G D+ +YN +S +G +++ F L ++ + V P+ +++ + K G+
Sbjct: 278 EGFEPDIVTYNTLISCYCRKG---RLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGK 334
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT--NLGY 355
V +A + R+ R D V ++ L+ Y GK E + L+ + G+ +
Sbjct: 335 VREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSL--LHEMIGSGICPDKVTC 392
Query: 356 HAMISSL---ARIGDIEGMEKIFE-EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+I ARI + + + E E V S D I + +M +EG A++
Sbjct: 393 QVLIEGYRKEARI--VSALNLVVELERFGVPISTD--IYDYLMVSICEEGRPFAAKSLLQ 448
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
I + G P + L E + I +AL
Sbjct: 449 RISQRGYVPGVEIYNKLIESLCKSDSIADAL 479
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 113/275 (41%), Gaps = 21/275 (7%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ L D Y AL+N + A L +M +G + +N ++ Y K + E
Sbjct: 314 NVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRES 373
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
S++ EM GI D + + + G + + + ++++++ P ST
Sbjct: 374 RSLLHEMIGSGICPDKVTCQVLIE--GYRKEARIVSALNLVVELERFGVP----ISTDIY 427
Query: 291 MYIKMGQVEKAEE-SLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWNL--- 342
Y+ + E+ + + + RI+ R VP Y+ L+ S+ K + + +
Sbjct: 428 DYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIE---SLCKSDSIADALLVKSE 484
Query: 343 --YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
+R++ P + Y A+I L R E + EE L DP I +M Y KE
Sbjct: 485 MGHRNIKPSA--ITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKE 542
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+ KAE + +E +S S+ TL + + +
Sbjct: 543 RDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCED 577
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 136/301 (45%), Gaps = 15/301 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL+N + + +A ++D+MR K ++ ++ YN+M+ + D ++
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+++ + V +Y I + + +G ++ + + M + + + P+ T++T+ K
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYNTIIRGMCK 275
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G V++A E +R +E + + D + Y+ LL + GK EE ++ S +
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 355 YHAMISSLARIGDIEGMEKIF----EEWLSVKS-SYDPRIANLMMSWYVKEGNFDKAEAF 409
Y +I++L R G IE + E+ L+ + SYDP IA + +EG D A F
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA-----AFCREGRLDVAIEF 390
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFK 469
++I +G P+ ++ T+ + + +AL F G P + F
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALE----IFGKLGEVGCSPNSSSYNTMFS 446
Query: 470 A 470
A
Sbjct: 447 A 447
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 8/307 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+D+M +G YN ++ K D MV ++ KG DV SYNI L +
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALL 309
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+QG E+ E + M +K +PN T+S + T + G++E+A L+ ++ + D
Sbjct: 310 NQGKWEEGEKLMTKMFSEKC-DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
Y L++ + G+ + S P + N Y+ ++++L + G + +IF
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN--YNTVLATLCKNGKADQALEIF 426
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+ V S + N M S G+ +A ++ G P+ ++ ++ RE
Sbjct: 427 GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCRE 486
Query: 436 RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKE 495
+ EA L + E S + ++ F KA E + E+ V +P E
Sbjct: 487 GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP---NE 543
Query: 496 KDYMSLI 502
Y LI
Sbjct: 544 TTYTVLI 550
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 119/266 (44%), Gaps = 13/266 (4%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y LL A + E L+ KM + + + Y++++T + + +E
Sbjct: 296 PDVIS----YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+++ MKEKG+ D YSY+ +++ +G + E M D + P+ ++T+
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL-PDIVNYNTVL 410
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K G+ ++A E ++ + Y+ + S S G K + S
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470
Query: 350 VTNLGYHAMISSLARIGDIEGM-EKIFEEWLSVKSS-YDPRIA--NLMMSWYVKEGNFDK 405
+ Y++MIS L R EGM ++ FE + ++S + P + N+++ + K +
Sbjct: 471 PDEITYNSMISCLCR----EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEG 431
A S++ G +PN T++ L EG
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIEG 552
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 122/273 (44%), Gaps = 3/273 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++ + M A ++ + KG + YN+++ + +++E E ++
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M + +V +Y+I +++ G E+ + +LMK +K + P+ ++ + + +
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK-EKGLTPDAYSYDPLIAAFCR 380
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+++ A E L + S D V Y+ +L+ GK ++ ++ V +
Sbjct: 381 EGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440
Query: 355 YHAMISSLARIGD-IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ M S+L GD I + I E +S D N M+S +EG D+A +
Sbjct: 441 YNTMFSALWSSGDKIRALHMIL-EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
P+ ++ + G + RI +A++ L+
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 262 TEKMEGVFELMKVDKAV----------NPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
T+ ++G F L + KAV P+ ++ + + KM +++ A L R+ S+
Sbjct: 128 TKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 187
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
D V Y+ ++ S GK + +V N S T + Y +I + G ++
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
K+ +E LS D N ++ KEG D+A ++ +G +P+ S+ L
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNIL 304
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 3/191 (1%)
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
D I+ SC S E + + E M V K NP+ + + + + + KA
Sbjct: 89 DTQMLKIFHRSCRSGNYIESLH-LLETM-VRKGYNPDVILCTKLIKGFFTLRNIPKAVRV 146
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
+ +E + D Y+ L++ + + + ++ RV + RS + Y+ MI SL
Sbjct: 147 MEILE-KFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
G ++ K+ + LS +++ + EG D+A + ++ G KP+ +
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 425 WETLAEGHIRE 435
+ T+ G +E
Sbjct: 266 YNTIIRGMCKE 276
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 117/288 (40%), Gaps = 3/288 (1%)
Query: 160 ASAEDFFLSLPDTLKDRR--VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
A A FL +P R Y ALL A M A + M G A S Y++M
Sbjct: 126 AHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIM 185
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ E +++++ KG +V YN + S G E +F+ M+ K
Sbjct: 186 VHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQ-SKG 244
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
PN T++ + + K G+VE+A R+ + V Y L+ S G E +
Sbjct: 245 CLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAF 304
Query: 338 RVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
R+ + + +I +L + G IE ++ + + I M+
Sbjct: 305 RLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDAL 364
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
K G FD A II EG P++ + +L +G RE ++LEA+S L
Sbjct: 365 CKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLL 412
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 167/422 (39%), Gaps = 19/422 (4%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-PD-TLKDRRVY 179
+ HA ++ M RG R + AA+ L + V A F + PD D VY
Sbjct: 125 FAHACRLFLLMPQRGCA-RTPFTYAAL-LQGLCGAGMVREAMAVFAGMWPDGCAPDSHVY 182
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
+++ A G A L+ KG+ + YN ++ Y + + + M+
Sbjct: 183 SIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQS 242
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
KG +V +Y + G E+ ++ M ++ + PN T++T+ G +E
Sbjct: 243 KGCLPNVRTYTQLICGFCKSGKVERAMVLYSRM-IEAGLAPNVVTYTTLIQGQCSEGHLE 301
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
A L +E+ + L+ G+ EE + V + Y +MI
Sbjct: 302 HAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMI 361
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+L + G +G + ++ ++ D + + ++ +E +A + N +IE G +
Sbjct: 362 DALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQ 421
Query: 420 PNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGS 479
N+ + L + H+RE R ++ + AA G K P V F ++ ++ M
Sbjct: 422 ANAVPFTILIDKHLREFRS-DSPKMISDRMAAAGVK---PDVVTYTVFIRSYCQDGRMED 477
Query: 480 KEAFVALLRQPGYRKE-KDYMSLI------GLTDEAVAENNKKND---EDSDEDSEMLLS 529
E+ + + G R Y +LI GL +A + D + +DE +LL
Sbjct: 478 AESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLG 537
Query: 530 QL 531
L
Sbjct: 538 LL 539
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 149/355 (41%), Gaps = 30/355 (8%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L+ E G + +W ++ L K R + A + + +G +++ +D
Sbjct: 306 LLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKG--IKVNQVIYTSMIDA 363
Query: 153 IAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ K A + + + D +Y +L++ R A L++ M + G +
Sbjct: 364 LCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQAN 423
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
++P+ +++ +++ D + + M G++ DV +Y +++ S G E E +
Sbjct: 424 AVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMI 483
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M +D V PN TT++T+ Y +G V +A SL+ + + Y LL L +
Sbjct: 484 QM-IDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGL---L 539
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMIS---SLARIGDIEGMEKIFEEWLSVKSSYDP 387
KK YH +++ SL +I D++ +E++ EE + ++ S
Sbjct: 540 LKKNS-------------------YHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSAS 580
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ + + K ++A++F + P+ + + E R + + EAL
Sbjct: 581 YVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEAL 635
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 14/349 (4%)
Query: 107 WELC---RVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
+ LC ++ +L KF A ++Y M N G R L + I +++ K V A+
Sbjct: 165 YTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMI--NILCKKGRVQEAK 222
Query: 164 DFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY 221
+ D + Y +L+ + R A + D+M G +S+ Y+ ++
Sbjct: 223 LIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNP 280
+E M+ EM +KGI VY+Y I L S C + S+E +E + ++ K + P
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKK--RGCVP 340
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV- 339
N TF+ + + + G+ E A ++ + V Y+ L++ G+ E + +
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF 400
Query: 340 -WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
W L P Y+ +I +GDI+ IF++ L SS + N ++ Y
Sbjct: 401 KWMLSHGSLPSTQT--YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKG 447
K+GN + A + G KP++ ++ L G R ++ A S G
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+ + AL++ R A L KM G ++ YN ++ ++ ++
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M G +YN + G +K +F+ M + +PN T++T+ Y K G
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM-LKAGSSPNVITYNTLIYGYCKQG 461
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT--NLG 354
+ A L ++ D Y L+S + GK E ++ Y + G++ ++
Sbjct: 462 NLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF--YGMMEHGISPNHVT 519
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP--RIANLMMSWYVKEGNFDKAEAFFNS 412
Y A+I + ++ +F W V+S P + N+M+S + K + +AE F
Sbjct: 520 YTAIIDGYFNLAKVDDALALF--WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577
Query: 413 IIEEGGKPNSTSWETLAEGHIRERR 437
++++G PN ++ + +G R R
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGR 602
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 123/311 (39%), Gaps = 45/311 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ + R +A L M + G + + + Y ++ Y + + D+ ++
Sbjct: 481 DAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M E G +YN+ +S S + E M V + + PN T+++ +
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM-VKQGLLPNVITYTSFIDGLCR 599
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL------------ 342
G+ A + +E R + Y L+ G+ E+ ++NL
Sbjct: 600 NGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPN 658
Query: 343 ---YRSVFPGVTNLG--YHA--MISSLARIGDIEGMEKIF-------------EEWLSVK 382
Y ++ G+ G Y A ++ S+ + G ++ E+I+ E L++
Sbjct: 659 VDTYTTLVKGLCGEGRCYEADQLVVSMQKKG-LQPSEEIYRALLIGECKNLKVESALNIF 717
Query: 383 SSYDPRIANLMMSWY-------VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
S D L +S Y KE ++A+ F +++E+ + W L +G ++E
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKE 777
Query: 436 RRILEALSCLK 446
E CLK
Sbjct: 778 G---ETDLCLK 785
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 148/338 (43%), Gaps = 4/338 (1%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+++EL A+ Y++ R R A+ + + + V A+ F +
Sbjct: 202 IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFA 261
Query: 172 TLKDRRVYG--ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYD 228
VY AL++AY R+ + A + + M++ G + + YN ++ K E+
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+V EM+ G++ D ++N L+ C G E +F+ M ++ + + +++T+
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM-TNRRIEQDVFSYNTL 380
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
K GQ++ A E L ++ + + V Y ++ + G+ +E ++ R +
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ + Y+ ++S ++G E I E SV D N ++ Y K+G +D+ +
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
F + E PN ++ TL +G+ + EA+ +
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 5/205 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP--DTLKDRRVY 179
++ A ++D M NR R LD I K + A + +P + + Y
Sbjct: 355 WEAARNLFDEMTNR--RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
+++ + +A A L +MR G A+ + YN ++++Y K+ +E ++ EM
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
GI+ DV +YN L G QG ++++ VF MK + + PN T+ST+ Y K G +
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL-PNLLTYSTLIDGYSKGGLYK 531
Query: 300 KAEESLRRVESRITGRDRVPYHYLL 324
+A E R +S D V Y L+
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALI 556
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/278 (17%), Positives = 110/278 (39%), Gaps = 39/278 (14%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD Y ALL Y + + + +M+ + + L Y+ ++ Y K Y E +
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
E K G+R DV Y+ + + G + + M + ++PN T++++ +
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM-TKEGISPNVVTYNSIIDAFG 595
Query: 294 KMGQVEKAEE-----SLRRVESRITGRDRVPYHYLLSLYGSVGKK-------------EE 335
+ ++++ + SL S ++ + ++ L+G + + +E
Sbjct: 596 RSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQE 655
Query: 336 VYRVWNLYRS-----VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
+ + ++R + P V + A++++ +R E + EE + +
Sbjct: 656 LSCILEVFRKMHQLEIKPNVVT--FSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVH 713
Query: 391 NLMMS-----WYVKEGNFDK--------AEAFFNSIIE 415
L+M W + FDK A AF+N++ +
Sbjct: 714 GLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTD 751
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 167/393 (42%), Gaps = 25/393 (6%)
Query: 94 LNDWEKGGRSLTKW-------ELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
LN W+ L +W +++E+ + +H+++V+ WM N+ + +
Sbjct: 107 LNHWDDVEGLLNRWVGRFSRKNFPLLIREITQIGSLEHSVQVFRWMKNQ-KNYCARNDIY 165
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRD 204
+ + L A+ + V A F + D Y AL+NA+ RA A ++D M
Sbjct: 166 NMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 225
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
YN ++ + E ++ +M E G+ D+ ++NI LS+ K
Sbjct: 226 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSK 285
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG--RDRVPYHY 322
+ FELMK + P+ TT + + +K+GQ KA + ++ + + D V +
Sbjct: 286 VLSYFELMK-GTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTT 344
Query: 323 LLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
++ LY G+ E +N L + P + + Y+A+I + A G + +F E
Sbjct: 345 IIHLYSVCGQIENCQTAFNTMLAEGLKPNI--VSYNALIGAYASHGMDKEAFSVFNEI-- 400
Query: 381 VKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
K+ + P + + +++ Y K G +KA F + KPN S+ L + + + +
Sbjct: 401 KKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLL 460
Query: 439 LEALSCLKGAFAAEGAKSWRPKPVNVINFFKAC 471
EA+ L G +P V++ AC
Sbjct: 461 TEAVEILH-EMERNGV---QPNIVSICTLLAAC 489
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 129/308 (41%), Gaps = 7/308 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-- 169
V+ ++ +Y L ++ M +G R + I + + K+ A D F S+
Sbjct: 273 VLSAYKRGNQYSKVLSYFELM--KGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKE 330
Query: 170 --PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
+ D + +++ Y N + + M +G + + YN ++ Y
Sbjct: 331 KRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMD 390
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
E S+ +E+K+ G DV SY L++ G G EK VFELM+ + PN +++
Sbjct: 391 KEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHC-KPNLVSYNA 449
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+ Y G + +A E L +E + V LL+ G G+K ++ V +
Sbjct: 450 LIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRG 509
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
+ Y++ I S +G+ + ++ + K DP N+++S K + +A
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEAL 569
Query: 408 AFFNSIIE 415
F + +++
Sbjct: 570 GFLDEMMD 577
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 145/351 (41%), Gaps = 23/351 (6%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ +L++ E+ G +C ++ + + V RG + +A ++AI
Sbjct: 463 AVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIG 522
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMR 203
L + D LSL ++ ++V Y L++ + G A +D+M
Sbjct: 523 SYLSVGEY------DKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
D + Y+ ++ Y K + E ESM ++MK G R DV +Y + + + E
Sbjct: 577 DLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWE 636
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH-- 321
K +F M+ D V P+ S++ + K GQ K V + ++P++
Sbjct: 637 KASALFLEMETDD-VQPDSIACSSLMRAFNKGGQPAKV-----LVLAEFMREKKIPFNNS 690
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFP--GVTNLG-YHAMISSLARIGDIEGMEKIFEEW 378
+ + E + L + + P V ++G + ++ L + G IE M K+F +
Sbjct: 691 SFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKI 750
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
++ + + ++++ + GN+ K + E G +P+ + +++
Sbjct: 751 VASGAEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSIS 801
>gi|218194139|gb|EEC76566.1| hypothetical protein OsI_14394 [Oryza sativa Indica Group]
Length = 701
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 52/289 (17%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y A+L+ Y + M+ L D+ R G+ + + V+ ++ + +YD ++
Sbjct: 242 VLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQ 301
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EM+E GI+ +++ YN L + G G +FE M + V PN T + +A +
Sbjct: 302 FVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMTAE-GVEPNARTLTALAKI 360
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
Y GR R +G + ++W R
Sbjct: 361 Y---------------------GRAR---------WG-----RDALQLWEQMREKKLPAD 385
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL----------MMSWYVKEG 401
N+ + ++S A +G + E++F E DP + ++ M++ Y G
Sbjct: 386 NILCNTLLSMCADVGLVGEAEQLFSEM------KDPDLGDVPKPDKWSYTAMINIYGSSG 439
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
+ D+A F ++E G +PN S+ + + + RI EA+ L+ A
Sbjct: 440 DADRALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMA 488
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 114/295 (38%), Gaps = 51/295 (17%)
Query: 145 DAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELL--IDKM 202
DAA DL +H DFF P LL Y+ R + LL + +
Sbjct: 119 DAA---DLAPTLH------DFF---PPASPPSTSDALLLLNYLHPSWRKSLSLLCWLRAL 166
Query: 203 RDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST 262
D + + ++ +NV + +++ + E + +M G+ LD NI
Sbjct: 167 PDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLD----NI----------- 211
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV-ESRITGRDRVPYH 321
T+ST+ T + Q +KA E R+ S D V Y
Sbjct: 212 ---------------------TYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYS 250
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+L +Y +G KEEV +++ R ++ + + GD +G++ +F+E V
Sbjct: 251 AILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREV 310
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ + N ++ K G A F + EG +PN+ + LA+ + R R
Sbjct: 311 GIKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRAR 365
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 137/351 (39%), Gaps = 41/351 (11%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRV 178
R AL + D M + L + I D KV V A FF L + D
Sbjct: 252 RVDAALSLLDEMKSNSFNADLVLYNVCI--DCFGKVGKVDMAWKFFHELKSQGLVPDDVT 309
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ +++ +A A L +++ YN M+ Y + +++E S++ K
Sbjct: 310 FTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQK 369
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
KG V +YN L+ G +G E+ + E MK+D A PN T+++ + M K G++
Sbjct: 370 RKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAA--PNLTSYNILIDMLCKAGEL 427
Query: 299 E---KAEESLRR--------------------------------VESRITGRDRVPYHYL 323
E K ++S++ ++ ++ D V + L
Sbjct: 428 EAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSL 487
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ G GK + Y ++ + Y ++I + + G E KI++E +
Sbjct: 488 IDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGC 547
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
S D + N M K G +K A F I +G P+ S+ L G ++
Sbjct: 548 SPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVK 598
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 152/346 (43%), Gaps = 7/346 (2%)
Query: 103 SLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASA 162
+LT + + ++ L K + AL+V D M G + + I +D + K + A
Sbjct: 410 NLTSYNI--LIDMLCKAGELEAALKVQDSMKEAGLFPNIITVN--IMIDRLCKAQRLDEA 465
Query: 163 EDFFLSLPDTL--KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTL 220
FL L + D + +L++ R +A +L +KM D G +++ Y ++
Sbjct: 466 CSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRN 525
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
+ K ++ + EM +G D+ N ++ G EK +FE +K + + P
Sbjct: 526 FFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKA-QGLTP 584
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
+ ++S + +K G + + ++ + D Y+ ++ + GK + Y++
Sbjct: 585 DVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLL 644
Query: 341 NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
++ T + Y ++I LA+I ++ +FEE S + + + ++ + K
Sbjct: 645 EEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKV 704
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G D+A ++++G PN+ +W L + ++ I EAL C +
Sbjct: 705 GRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQ 750
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 123/266 (46%), Gaps = 9/266 (3%)
Query: 182 LLNAYVRARMRGN----AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
LLN Y+ + L ++++ +G Y++++ +K + + EM
Sbjct: 553 LLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM 612
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KE+G+ LD +YNI + G K + E MK K + P T+ ++ K+ +
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKT-KGLQPTVVTYGSVIDGLAKIDR 671
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+++A +S+ + V Y L+ +G VG+ +E Y + + + + P +
Sbjct: 672 LDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYT--W 729
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ ++ +L + +I+ F+ ++K + ++M++ K F+KA F+ + +
Sbjct: 730 NCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQK 789
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
+G KPN+ ++ T+ G R +LEA
Sbjct: 790 QGLKPNTITYTTMISGLARVGNVLEA 815
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 1/220 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R Y +++ + ++ A L+++M+ KG + Y ++ KI DE +
Sbjct: 620 DTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLF 679
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E K K + L+V Y+ + G G ++ + E + + K + PN T++ + +K
Sbjct: 680 EEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEEL-MQKGLTPNTYTWNCLLDALVK 738
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++++A + +++ + V Y +++ V K + + W + +
Sbjct: 739 AEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTIT 798
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
Y MIS LAR+G++ + +FE + S D N M+
Sbjct: 799 YTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMI 838
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY +L+ + + + + + +M +G + + N M K E ++ ++ E+
Sbjct: 518 VYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEI 577
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K +G+ DV SY+I + G ++ +F MK ++ ++ + ++ + + K G+
Sbjct: 578 KAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMK-EQGLHLDTRAYNIVIDGFCKSGK 636
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
V KA + L ++++ V Y ++ + + +E Y ++ +S + + Y +
Sbjct: 637 VNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSS 696
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I ++G I+ I EE + + + N ++ VK D+A F ++
Sbjct: 697 LIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLK 756
Query: 418 GKPNSTSWETLAEGHIRERRILEAL 442
PN ++ + G + R+ +A
Sbjct: 757 CPPNEVTYSIMVNGLCKVRKFNKAF 781
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 123/271 (45%), Gaps = 5/271 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ALL R R E ++++M G+ + M+ ++K ++ E ++ M+
Sbjct: 135 YNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMR 194
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT--FSTMATMYIKMG 296
+ R +Y+ + + G+ + + + + L++ + + T F+T+ ++ + G
Sbjct: 195 KFKFR---PAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREG 251
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+V+ A L ++S D V Y+ + +G VGK + ++ ++ +S ++ +
Sbjct: 252 RVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFT 311
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+MI L + ++ ++FEE S KS N M+ Y G F++A + +
Sbjct: 312 SMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRK 371
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLKG 447
G P+ ++ + R+ ++ EAL L+
Sbjct: 372 GCIPSVIAYNCILTCLGRKGKVEEALRILEA 402
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY +L++ + + A L+++++ KG ++ +N ++ +K +E DE M
Sbjct: 693 VYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM 752
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K + +Y+I ++ K ++ M+ + + PN T++TM + ++G
Sbjct: 753 KNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQ-KQGLKPNTITYTTMISGLARVGN 811
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
V +A++ R +S D Y+ ++ + K + Y ++
Sbjct: 812 VLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILF 854
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 152/348 (43%), Gaps = 20/348 (5%)
Query: 98 EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVH 157
E+GG + ++ V+ K R A++V+D M +GE A+ + + +
Sbjct: 542 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE-----VKPEAVMYNALIGGY 596
Query: 158 GVASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
D L D + +R V Y L++A A L+++M KG A
Sbjct: 597 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 656
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
YN+++ + K + + M +G+R V +Y + + +G ++ + +F+
Sbjct: 657 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFD- 715
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
V + + P+ ++ + + G +++A E + +E + D V Y+ L+ +G
Sbjct: 716 EAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLG 775
Query: 332 KKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+ +E ++ + R + P + Y+ +IS + GD++ +I E ++ ++P +
Sbjct: 776 RVDEARKLIDEMTERGIQPDLVT--YNTLISGYSMKGDVKDALRIRNEMMN--KGFNPTL 831
Query: 390 A--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
N ++ K G D AE ++E G P+ +++ +L EG E
Sbjct: 832 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 8/269 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKG-YAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
YG +++ + + A + D+M KG ++ YN ++ Y + D
Sbjct: 552 TYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDR 611
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQG-STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
M E+G+ + V +YN+ + + G TE E V E+ K + P+ T++ + + K
Sbjct: 612 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG--KGLAPDVFTYNILINGHCKE 669
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
G V+KA E + R V Y L+ G+ +E ++++ + R + P + +
Sbjct: 670 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL--V 727
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+A+I+S + G+I+ +I E + + D N +M G D+A + +
Sbjct: 728 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 787
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
E G +P+ ++ TL G+ + + +AL
Sbjct: 788 TERGIQPDLVTYNTLISGYSMKGDVKDAL 816
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 16/260 (6%)
Query: 192 RGNAELLIDKMRD----KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG-IRLDV 246
RG + +D MR+ G A + Y +++ + K+ DE + EM KG ++ +
Sbjct: 527 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 586
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
YN + QG + ++ V++ V T++ + G+ +A E +
Sbjct: 587 VMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 645
Query: 307 RVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISS 361
+ + D Y+ L++ + G+V K E++ N+ R GV T + Y A+I +
Sbjct: 646 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE--NMSRR---GVRATVVTYTALIYA 700
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L++ G ++ +K+F+E + D + N +++ + GN D+A + ++ P+
Sbjct: 701 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 760
Query: 422 STSWETLAEGHIRERRILEA 441
++ TL G R+ EA
Sbjct: 761 DVTYNTLMRGLCLLGRVDEA 780
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA- 301
R + +YN ++ S+G + + M+ + PN T+ T+ + + K+G+V++A
Sbjct: 511 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 570
Query: 302 ---EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPGVTNLGYH 356
+E L + E + + V Y+ L+ Y GK + +YR + R V +T Y+
Sbjct: 571 KVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGV--AMTVATYN 625
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ +L G ++ EE + D N++++ + KEGN KA F ++
Sbjct: 626 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 685
Query: 417 GGKPNSTSWETL 428
G + ++ L
Sbjct: 686 GVRATVVTYTAL 697
>gi|387219245|gb|AFJ69331.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 521
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 12/267 (4%)
Query: 173 LKDRRVYGALLNAYV-RARMRGNAELLIDKMRDKGYAVHS------LP----YNVMMTLY 221
L D Y L++AY R G +L + +G V LP Y +MT Y
Sbjct: 225 LPDVVTYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAY 284
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
+ + E+++ M+E I +V +Y + +++ +G + EGV M + V PN
Sbjct: 285 AAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRM-ISAYVAPN 343
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
T++T+ Y G AEE L R+E+ + + L+++Y + G+ E V
Sbjct: 344 ANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLA 403
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ G T + + ++++ GD+ G E++ + P N +M+ Y +G
Sbjct: 404 RMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADKG 463
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ AE + +G P+ T+ TL
Sbjct: 464 DVAGAEGVLARMRAKGVGPDETTLSTL 490
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 15/253 (5%)
Query: 163 EDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
E+ LP+ + Y L+ AY +E ++++M + A + + Y V+MT Y
Sbjct: 265 EEVLRVLPNVM----TYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYT 320
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
+ E ++ M + + +Y L + G+ E V M+ V P
Sbjct: 321 LRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLARMEA-AGVLPTA 379
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRV 339
TF+T+ T+Y G+VE A+ L R+E+ G + + LL+ Y G VG E+V R
Sbjct: 380 LTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRR 439
Query: 340 --WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
Y FP L Y+ +++ A GD+ G E + + D + ++ Y
Sbjct: 440 REAEAYPD-FP----LTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAY 494
Query: 398 VKEGNFDKAEAFF 410
+ G+ AEA
Sbjct: 495 AEAGDPLGAEAVL 507
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 64/167 (38%), Gaps = 36/167 (21%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL+AY AE ++ +M G +L + +MT+Y E + + +++ M
Sbjct: 346 TYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARM 405
Query: 238 KEKGIR---------LDVY--------------------------SYNIWLSSCGSQGST 262
+ G+ L+ Y +YN ++ +G
Sbjct: 406 EAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADKGDV 465
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
EGV M+ K V P+ TT ST+ Y + G AE L RV+
Sbjct: 466 AGAEGVLARMRA-KGVGPDETTLSTLLHAYAEAGDPLGAEAVLLRVQ 511
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 152/348 (43%), Gaps = 20/348 (5%)
Query: 98 EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVH 157
E+GG + ++ V+ K R A++V+D M +GE A+ + + +
Sbjct: 547 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE-----VKPEAVMYNALIGGY 601
Query: 158 GVASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
D L D + +R V Y L++A A L+++M KG A
Sbjct: 602 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 661
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
YN+++ + K + + M +G+R V +Y + + +G ++ + +F+
Sbjct: 662 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFD- 720
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
V + + P+ ++ + + G +++A E + +E + D V Y+ L+ +G
Sbjct: 721 EAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLG 780
Query: 332 KKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+ +E ++ + R + P + Y+ +IS + GD++ +I E ++ ++P +
Sbjct: 781 RVDEARKLIDEMTERGIQPDLVT--YNTLISGYSMKGDVKDALRIRNEMMN--KGFNPTL 836
Query: 390 A--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
N ++ K G D AE ++E G P+ +++ +L EG E
Sbjct: 837 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 8/269 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKG-YAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
YG +++ + + A + D+M KG ++ YN ++ Y + D
Sbjct: 557 TYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDR 616
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQG-STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
M E+G+ + V +YN+ + + G TE E V E+ K + P+ T++ + + K
Sbjct: 617 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG--KGLAPDVFTYNILINGHCKE 674
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
G V+KA E + R V Y L+ G+ +E ++++ + R + P + +
Sbjct: 675 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL--V 732
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+A+I+S + G+I+ +I E + + D N +M G D+A + +
Sbjct: 733 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 792
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
E G +P+ ++ TL G+ + + +AL
Sbjct: 793 TERGIQPDLVTYNTLISGYSMKGDVKDAL 821
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 16/260 (6%)
Query: 192 RGNAELLIDKMRD----KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG-IRLDV 246
RG + +D MR+ G A + Y +++ + K+ DE + EM KG ++ +
Sbjct: 532 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 591
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
YN + QG + ++ V++ V T++ + G+ +A E +
Sbjct: 592 VMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 650
Query: 307 RVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISS 361
+ + D Y+ L++ + G+V K E++ N+ R GV T + Y A+I +
Sbjct: 651 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE--NMSRR---GVRATVVTYTALIYA 705
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L++ G ++ +K+F+E + D + N +++ + GN D+A + ++ P+
Sbjct: 706 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 765
Query: 422 STSWETLAEGHIRERRILEA 441
++ TL G R+ EA
Sbjct: 766 DVTYNTLMRGLCLLGRVDEA 785
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA- 301
R + +YN ++ S+G + + M+ + PN T+ T+ + + K+G+V++A
Sbjct: 516 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 575
Query: 302 ---EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPGVTNLGYH 356
+E L + E + + V Y+ L+ Y GK + +YR + R V +T Y+
Sbjct: 576 KVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGV--AMTVATYN 630
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ +L G ++ EE + D N++++ + KEGN KA F ++
Sbjct: 631 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 690
Query: 417 GGKPNSTSWETL 428
G + ++ L
Sbjct: 691 GVRATVVTYTAL 702
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 156/360 (43%), Gaps = 26/360 (7%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L + GG LT ++ L K ++ ALE++ N+G S+A +
Sbjct: 475 LLRNMSPGGGLLTT-----LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL---- 525
Query: 153 IAKVHGVASA---EDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRD 204
HG+ A ++ F + L DR Y L++ + A + +D+M
Sbjct: 526 ----HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
+G + Y++++ + + +E + K G+ DVY+Y++ + C TE+
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
+ F+ M + K V PN ++ + Y + G++ A E ++ + + Y L+
Sbjct: 642 GQEFFDEM-MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700
Query: 325 SLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ + EE ++ R + P V + Y A+I ++G + +E + E S
Sbjct: 701 KGMSIISRVEEAKLLFEEMRMEGLEPNVFH--YTALIDGYGKLGQMVKVECLLREMHSKN 758
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ +M+ Y ++GN +A N + E+G P+S +++ G++++ +LEA
Sbjct: 759 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 818
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 138/355 (38%), Gaps = 41/355 (11%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
AL+V+ + N+G F + + L+ E F + D ++ +N
Sbjct: 223 ALDVFPVLANKG-MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 281
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV----ESMV------ 234
A+ + A L KM + G A + + +N ++ YDE E MV
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 235 -------------------------SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
EM +KG +V YN + S GS K +
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+LM V K ++ +T++T+ Y K GQ + AE L+ + S ++ + ++ L S
Sbjct: 402 DLM-VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 460
Query: 330 VGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
+ R L R++ PG L +IS L + G +++ ++L+ D
Sbjct: 461 HLMFDSALRFVGEMLLRNMSPGGGLL--TTLISGLCKHGKHSKALELWFQFLNKGFVVDT 518
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
R +N ++ + G D+A I+ G + S+ TL G ++++ EA
Sbjct: 519 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLID 200
++ +D K ++FF + P+T+ VY L+ AY R+ A L +
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV----VYNHLIRAYCRSGRLSMALELRE 682
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
M+ KG + +S Y ++ I +E + + EM+ +G+ +V+ Y + G G
Sbjct: 683 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
K+E + M K V+PN T++ M Y + G V +A L + + D + Y
Sbjct: 743 QMVKVECLLREMH-SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801
Query: 321 HYLLSLYGSVGKKEEVYR 338
+ Y G E ++
Sbjct: 802 KEFIYGYLKQGGVLEAFK 819
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 114/269 (42%), Gaps = 9/269 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ RA+ G+A ++ +M KG+ + + YN ++ +++ ++ + M
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ L +YN + G + E + + M + N N +F+++ +
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM-LSIGFNVNQGSFTSVICLLCSHLM 463
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSV----GKKEEVYRVWNLYRSVFPGVTNL 353
+ A LR V + R+ P LL+ S GK + +W + + V
Sbjct: 464 FDSA---LRFVGEMLL-RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 519
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+A++ L G ++ +I +E L D N ++S + D+A F + +
Sbjct: 520 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 579
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ G KP++ ++ L G ++ EA+
Sbjct: 580 VKRGLKPDNYTYSILICGLFNMNKVEEAI 608
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 123/305 (40%), Gaps = 46/305 (15%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L+++++ A A + D M KG ++ S YN ++ Y K + D E ++ EM
Sbjct: 380 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 439
Query: 238 KEKGIRLDVYSY-NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
G ++ S+ ++ C + V E++ + ++P +T+ + K G
Sbjct: 440 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL--RNMSPGGGLLTTLISGLCKHG 497
Query: 297 QVEKAEE-------------------------------SLRRVESRITGR----DRVPYH 321
+ KA E R++ I GR DRV Y+
Sbjct: 498 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 557
Query: 322 YLLSLYGSVGKK--EEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
L+S G GKK +E + + + R + P N Y +I L + +E + +++
Sbjct: 558 TLIS--GCCGKKKLDEAFMFLDEMVKRGLKP--DNYTYSILICGLFNMNKVEEAIQFWDD 613
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
D ++M+ K ++ + FF+ ++ + +PN+ + L + R R
Sbjct: 614 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 673
Query: 438 ILEAL 442
+ AL
Sbjct: 674 LSMAL 678
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 3/267 (1%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y L+ A + A L +MR++G + Y V++ K DE M++E
Sbjct: 291 RTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNE 350
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M EKG+ V +N + S +G E GV LM+ K V PN T++ + + +
Sbjct: 351 MVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLME-SKKVCPNVRTYNELICGFCRGK 409
Query: 297 QVEKAEESLRR-VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+++A L + VES+++ D V Y+ L+ VG + R++ L +
Sbjct: 410 SMDRAMALLNKMVESKLSP-DVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTF 468
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+A + L R+G + +I E + ++ Y K G + A + F ++
Sbjct: 469 NAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLA 528
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
E PNS ++ + +G +E ++ +A+
Sbjct: 529 EECLPNSITFNVMIDGLRKEGKVQDAM 555
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 116/265 (43%), Gaps = 5/265 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ AL+ +Y + M +A ++ M K + YN ++ + + K D +++++M
Sbjct: 363 FNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMV 422
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E + DV +YN + G + +F LM D +P+ TF+ +MG+V
Sbjct: 423 ESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRD-GFSPDQWTFNAFMVCLCRMGRV 481
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
+A + L ++ + + Y L+ Y GK E ++ L P ++ ++
Sbjct: 482 GEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLP--NSITFN 539
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
MI L + G ++ + E+ N+++ +KE +FD+A N +I
Sbjct: 540 VMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISS 599
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
G +PN ++ + + + R+ EA
Sbjct: 600 GYQPNVVTYTAFIKAYCSQGRLEEA 624
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 5/254 (1%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+MR+ G Y V++ + E S+ EM+E+G +VY+Y + + +G
Sbjct: 280 RMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEG 339
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
++ + M V+K V P+ F+ + Y K G +E A L +ES+ + Y
Sbjct: 340 RMDEALKMLNEM-VEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTY 398
Query: 321 HYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
+ L+ + + + N + + P V Y+ +I L +G ++ ++F
Sbjct: 399 NELICGFCRGKSMDRAMALLNKMVESKLSPDVVT--YNTLIHGLCEVGVVDSASRLFRLM 456
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+ S D N M + G +A S+ E+ K N ++ L +G+ + +I
Sbjct: 457 IRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKI 516
Query: 439 LEALSCLKGAFAAE 452
A S K A E
Sbjct: 517 EHAASLFKRMLAEE 530
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 120/283 (42%), Gaps = 21/283 (7%)
Query: 171 DTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
++LK++ V Y AL++ Y +A +A L +M + +S+ +NVM+ K
Sbjct: 489 ESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKE 548
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
+ + +V +M + ++ +++YNI + + ++ + + + PN T
Sbjct: 549 GKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRL-ISSGYQPNVVT 607
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
++ Y G++E+AEE + ++++ D Y+ L++ YG +G + + V
Sbjct: 608 YTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMF 667
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMS----WYVKE 400
+ L Y ++ L +EK +E S D + N+ + W +
Sbjct: 668 GTGCEPSYLTYSILMKHLV-------IEKHKKEG-SNPVGLDVSLTNISVDNTDIW--SK 717
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+F F + E G PN ++ L G + R+ A S
Sbjct: 718 IDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFS 760
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 12/224 (5%)
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK--AVNPNWTTFSTMATMYIKMGQV 298
+L + SYN L ++M +++ M D +V PN T +TM Y K+G +
Sbjct: 146 AFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNM 205
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
A R+ G D Y L+ Y + ++V R ++ V P + Y +
Sbjct: 206 AVARLFFVRILRCEPGPDLFTYTSLVLGY---CRNDDVERACGVF-CVMPRRNAVSYTNL 261
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSS---YDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
I L G + + E W ++ R +++ + G +A + F + E
Sbjct: 262 IHGLCEAGK---LHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRE 318
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
G +PN ++ L + +E R+ EAL L A S P
Sbjct: 319 RGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVP 362
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 10/259 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESM 233
D Y AL++A+ RA +A + +M G + YNV++ +Y KI + +V ++
Sbjct: 177 DASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVAL 236
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
V MK GI LD Y+YN +S C ++ VF+ M+ P+ TF+++ +Y
Sbjct: 237 VDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRA-AGFEPDKVTFNSLLDVYG 295
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVT 351
K ++A L+ +E V Y+ L+S Y G +E + + + P V
Sbjct: 296 KARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDV- 354
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAF 409
+ Y +IS L R G I+ ++E L ++ P + N ++ + G F + A
Sbjct: 355 -ITYTTLISGLDRAGKIDAAIGTYDEML--RNGCKPNLCTYNALIKLHGVRGKFPEMMAV 411
Query: 410 FNSIIEEGGKPNSTSWETL 428
F+ + G P+ +W TL
Sbjct: 412 FDDLRSAGFVPDVVTWNTL 430
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 153/337 (45%), Gaps = 22/337 (6%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHG-VASAEDFFLSLP 170
+V + R++ A+ V+ M G A + +++ V+ +A ++L
Sbjct: 184 LVSAFSRASRFRDAVAVFRRMVANG------IQPAIVTYNVVLHVYSKIAVPWKDVVALV 237
Query: 171 DTLK------DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
D++K DR Y L++ R + A + D+MR G+ + +N ++ +Y K
Sbjct: 238 DSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKA 297
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
+ +DE ++ EM+ G V +YN +SS G ++ + E M+V K + P+ T
Sbjct: 298 RMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEV-KGIQPDVIT 356
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
++T+ + + G+++ A + + + Y+ L+ L+G GK E+ V++ R
Sbjct: 357 YTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLR 416
Query: 345 SV--FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKE 400
S P V ++ +++ + G + +F+E KS Y P ++S Y +
Sbjct: 417 SAGFVPDVVT--WNTLLAVFGQNGLDSEVSGVFKEM--KKSGYVPERDTYVSLISSYSRC 472
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
G FD++ + +IE G P+ +++ + R R
Sbjct: 473 GLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGR 509
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 153/376 (40%), Gaps = 38/376 (10%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
++ +N + S + P ++++ + G L ++ ++ R+ YK A +V+
Sbjct: 213 IVTYNVVLHVYSKIAVPWKDVVALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVF 272
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRA 189
D M G D+ + +LL+ Y +A
Sbjct: 273 DEMRAAGFE-----------------------------------PDKVTFNSLLDVYGKA 297
Query: 190 RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSY 249
RM A ++ +M G + YN +++ Y+K E + EM+ KGI+ DV +Y
Sbjct: 298 RMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITY 357
Query: 250 NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
+S G + G ++ M + PN T++ + ++ G+ + +
Sbjct: 358 TTLISGLDRAGKIDAAIGTYDEM-LRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLR 416
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
S D V ++ LL+++G G EV V+ + Y ++ISS +R G +
Sbjct: 417 SAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFD 476
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
+I++ + D N ++S + G +++AE F + +P+ S+ +L
Sbjct: 477 QSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLL 536
Query: 430 EGHIRERRI--LEALS 443
+ +++ ++ALS
Sbjct: 537 HAYANAKKLDKMKALS 552
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 157/406 (38%), Gaps = 49/406 (12%)
Query: 44 RQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGS--ASVLNDWEKGG 101
R K P + + S G V ++ WN + L++ L S + V + +K G
Sbjct: 402 RGKFPEMMAVFDDLRSAGFVP----DVVTWNTL---LAVFGQNGLDSEVSGVFKEMKKSG 454
Query: 102 RSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS 161
+ ++ + + ++E+Y M G +S +A L +A+
Sbjct: 455 YVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAV--LSALARGGRWEQ 512
Query: 162 AEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AE F + D D Y +LL+AY A+ + L + + + H ++
Sbjct: 513 AEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVL 572
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
+ K+ E E E+ + LD+ N +S G +K+E + LMK ++N
Sbjct: 573 VNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMK-GSSIN 631
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
+ T++++ MY ++G EK E L ++S DR Y+ ++ YG G+ +E R
Sbjct: 632 LSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASR- 690
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+F E S D N+ + YV
Sbjct: 691 ----------------------------------LFSEMKSSGLIPDIVTYNIFVKSYVA 716
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
F++A ++ G KPN ++ ++ + + R +I +A S L
Sbjct: 717 NSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFL 762
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 154 AKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
+KV+ ++ E FL L D V A+++ Y + RM E ++ M+ + +
Sbjct: 575 SKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLST 634
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
YN +M +Y ++ + ++ E++++E+K G R D YSYN + + G +G ++ +F
Sbjct: 635 ATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSE 694
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
MK + P+ T++ Y+ E+A + +R + +R + Y+ +L Y G
Sbjct: 695 MKSSGLI-PDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHG 753
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
K + + + PG++ ++ LAR
Sbjct: 754 KIADAKSFLSNLPQLHPGISKQEQQRLLELLAR 786
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/376 (19%), Positives = 152/376 (40%), Gaps = 48/376 (12%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L + + A+ YD M G + L +A I K+HGV +++ D
Sbjct: 360 LISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALI------KLHGVRGKFPEMMAVFD 413
Query: 172 TLK------DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
L+ D + LL + + + + +M+ GY Y +++ Y +
Sbjct: 414 DLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCG 473
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+D+ + M E GI D+ +YN LS+ G E+ E +F M+ + P+ ++
Sbjct: 474 LFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEME-NLDCRPDELSY 532
Query: 286 STMATMYIKMGQVEKAE------------------ESLRRVESRIT------------GR 315
S++ Y +++K + ++L V S++ GR
Sbjct: 533 SSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGR 592
Query: 316 DRVPY-----HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
R + ++S+YG ++V + +L + ++ Y++++ +R+GD E
Sbjct: 593 RRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEK 652
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
E I E S + D N M+ Y ++G +A F+ + G P+ ++ +
Sbjct: 653 CENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVK 712
Query: 431 GHIRERRILEALSCLK 446
++ EA+ ++
Sbjct: 713 SYVANSMFEEAIDLVR 728
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 167/393 (42%), Gaps = 25/393 (6%)
Query: 94 LNDWEKGGRSLTKW-------ELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
LN W+ L +W +++E+ + +H+++V+ WM N+ + +
Sbjct: 107 LNHWDDVEGLLNRWVGRFSRKNFPLLIREITQIGSLEHSVQVFRWMKNQ-KNYCARNDIY 165
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRD 204
+ + L A+ + V A F + D Y AL+NA+ RA A ++D M
Sbjct: 166 NMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 225
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
YN ++ + E ++ +M E G+ D+ ++NI LS+ K
Sbjct: 226 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSK 285
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG--RDRVPYHY 322
+ FELMK + P+ TT + + +K+GQ KA + ++ + + D V +
Sbjct: 286 VLSYFELMK-GTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTT 344
Query: 323 LLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
++ LY G+ E +N L + P + + Y+A+I + A G + +F E
Sbjct: 345 IIHLYSVCGQIENCQTAFNTMLAEGLKPNI--VSYNALIGAYASHGMDKEAFSVFNEI-- 400
Query: 381 VKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
K+ + P + + +++ Y K G +KA F + KPN S+ L + + + +
Sbjct: 401 KKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLL 460
Query: 439 LEALSCLKGAFAAEGAKSWRPKPVNVINFFKAC 471
EA+ L G + P V++ AC
Sbjct: 461 TEAVEILH-EMERNGVQ---PNIVSICTLLAAC 489
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 129/308 (41%), Gaps = 7/308 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-- 169
V+ ++ +Y L ++ M +G R + I + + K+ A D F S+
Sbjct: 273 VLSAYKRGNQYSKVLSYFELM--KGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKE 330
Query: 170 --PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
+ D + +++ Y N + + M +G + + YN ++ Y
Sbjct: 331 KRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMD 390
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
E S+ +E+K+ G DV SY L++ G G EK VFELM+ + PN +++
Sbjct: 391 KEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHC-KPNLVSYNA 449
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+ Y G + +A E L +E + V LL+ G G+K ++ V +
Sbjct: 450 LIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRG 509
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
+ Y++ I S +G+ + ++ + K DP N+++S K + +A
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEAL 569
Query: 408 AFFNSIIE 415
F + +++
Sbjct: 570 GFLDEMMD 577
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 145/351 (41%), Gaps = 23/351 (6%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ +L++ E+ G +C ++ + + V RG + +A ++AI
Sbjct: 463 AVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIG 522
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMR 203
L + D LSL ++ ++V Y L++ + G A +D+M
Sbjct: 523 SYLSVGEY------DKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
D + Y+ ++ Y K + E ESM ++MK G R DV +Y + + + E
Sbjct: 577 DLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWE 636
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH-- 321
K +F M+ D V P+ S++ + K GQ K V + ++P++
Sbjct: 637 KASALFLEMETDD-VQPDSIACSSLMRAFNKGGQPAKV-----LVLAEFMREKKIPFNNS 690
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFP--GVTNLG-YHAMISSLARIGDIEGMEKIFEEW 378
+ + E + L + + P V ++G + ++ L + G IE M K+F +
Sbjct: 691 SFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKI 750
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
++ + + ++++ + GN+ K + E G +P+ + +++
Sbjct: 751 VASGAEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSIS 801
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 121/269 (44%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY A+++A + A + +M ++G + + +N +++ + ++E + + +EM
Sbjct: 191 VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEM 250
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+E+GI D +YN +++ G + E M + P+ T+STM Y K+G
Sbjct: 251 EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGL 310
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+A + + ++ D + Y+ ++ ++ +G +E + + + Y+A
Sbjct: 311 AHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNA 370
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ S + G + EE +S + + ++ Y K G A A F + + G
Sbjct: 371 LLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAG 430
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLK 446
+P+ + TL +G + EAL+ L+
Sbjct: 431 LQPDVVLYSTLVDGCCKNGSPDEALALLE 459
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 116/262 (44%), Gaps = 2/262 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR + L++A RA + + +M ++G A + YN ++ Y + + +++
Sbjct: 223 DRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALM 282
Query: 235 SEM-KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
M K GI V +Y+ + G + +F+ M+ ++ V P+ ++TM ++
Sbjct: 283 ETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMR-NQNVEPDGICYNTMVDIHA 341
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
++G ++A R +E +D V Y+ LL YG GK E + + L
Sbjct: 342 RLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL 401
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y A+I + + G +F++ D + + ++ K G+ D+A A +
Sbjct: 402 TYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEM 461
Query: 414 IEEGGKPNSTSWETLAEGHIRE 435
+ G +PN ++ +L + + R+
Sbjct: 462 ADNGIRPNVITYNSLLDAYGRQ 483
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 5/205 (2%)
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G +V+ Y+ + + G G K +FE MKV PN ++ + K G
Sbjct: 150 GFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV--VCKPNLVVYNAVIDACSKGGDYPT 207
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A R + + DR+ ++ L+S G + EE R++ ++ Y+ +I+
Sbjct: 208 ALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIA 267
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ R G + + E ++ S +P + + M+ Y K G +A A F + +
Sbjct: 268 TYCRGGQMH-LGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNV 326
Query: 419 KPNSTSWETLAEGHIRERRILEALS 443
+P+ + T+ + H R EA S
Sbjct: 327 EPDGICYNTMVDIHARLGNFDEAHS 351
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 85/234 (36%), Gaps = 55/234 (23%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y AL++AY + +A L ++ G + Y+ ++ K DE +++ EM
Sbjct: 402 TYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEM 461
Query: 238 KEKGIRLDVYSYNIWLSSCGSQ-----------------------------------GST 262
+ GIR +V +YN L + G Q
Sbjct: 462 ADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPK 521
Query: 263 EKMEGVFELMKV-----DKAVNPNWTTFSTMATMYIKMGQVEKAE---ESLRRVESRITG 314
+K V +V V PN TFS++ VE A E++R + R+ G
Sbjct: 522 QKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMRVFDGRVYG 581
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDI 368
V + L+ RVW ++F +T LG++ ++ + D+
Sbjct: 582 ---VTHGLLMGFR---------IRVWRDAETLFNELTTLGHNTAVAFYNALTDV 623
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 130/321 (40%), Gaps = 41/321 (12%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y L+ A + G A L+D+MRDKG + YNV++ K DE
Sbjct: 245 PDVI----TYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ M G + +V ++NI L S S G E M + K +P+ TF+ +
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEM-IRKGCSPSVVTFNILI 359
Query: 290 TMYIKMG-----------------------------------QVEKAEESLRRVESRITG 314
+ G ++E+A E L + SR
Sbjct: 360 NFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCY 419
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
D V Y+ LL+ GK + + N S + Y+ +I L+++G + K+
Sbjct: 420 PDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKL 479
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+E D + ++ +EG D+A AFF+ + E G KPN+ ++ ++ G +
Sbjct: 480 LDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCK 539
Query: 435 ERRILEALSCLKGAFAAEGAK 455
R+ + A+ L A G K
Sbjct: 540 ARQTVRAIDFL-AYMVARGCK 559
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 151/404 (37%), Gaps = 54/404 (13%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+++ L + K A+EV D R I ++ K GV A + L D
Sbjct: 218 ILRTLCDSGKLKEAMEVLDRQMQR--ECYPDVITYTILIEATCKESGVGQA----MKLLD 271
Query: 172 TLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
++D+ Y L+N + A ++ M G + + +N+++
Sbjct: 272 EMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTG 331
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ + E ++EM KG V ++NI ++ +G + V E M PN ++
Sbjct: 332 RWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMP-QHGCTPNSLSY 390
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ + K ++E+A E L + SR D V Y+ LL+ GK + + N S
Sbjct: 391 NPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGS 450
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ Y+ +I L+++G + K+ +E D + ++ +EG D+
Sbjct: 451 KGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDE 510
Query: 406 AEAFF---------------NSI--------------------IEEGGKPNSTSWETLAE 430
A AFF NSI + G KP TS+ L E
Sbjct: 511 AIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIE 570
Query: 431 GHIRERRILEALS-----CLKGAFAAEGAKSWRPK-PVNVINFF 468
G E EAL C +G A+ K P NV F+
Sbjct: 571 GLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKIPFNVFYFY 614
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 132/327 (40%), Gaps = 25/327 (7%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A +++ + D G + YNV+++ Y K E ++ M + DV +YN L
Sbjct: 164 ATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILR 220
Query: 255 S-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+ C S E ME + M+ + P+ T++ + K V +A + L + +
Sbjct: 221 TLCDSGKLKEAMEVLDRQMQ--RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGC 278
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
D V Y+ L++ G+ +E R N S + ++ ++ S+ G EK
Sbjct: 279 KPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 338
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
E + S N+++++ ++G +A + + G PNS S+ L
Sbjct: 339 FLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALC 398
Query: 434 RERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA-CEEESDMGSKEAFVALLRQPG- 491
+++++ A+ L ++ P V A C++ G + V +L Q G
Sbjct: 399 KDKKMERAIEYLDIMV----SRGCYPDIVTYNTLLTALCKD----GKVDVAVEILNQLGS 450
Query: 492 ---------YRKEKDYMSLIGLTDEAV 509
Y D +S +G TD+A+
Sbjct: 451 KGCSPVLITYNTVIDGLSKVGKTDDAI 477
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 156/360 (43%), Gaps = 26/360 (7%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L + GG LT ++ L K ++ ALE++ N+G S+A +
Sbjct: 451 LLRNMSPGGGLLTT-----LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL---- 501
Query: 153 IAKVHGVASA---EDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRD 204
HG+ A ++ F + L DR Y L++ + A + +D+M
Sbjct: 502 ----HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 557
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
+G + Y++++ + + +E + K G+ DVY+Y++ + C TE+
Sbjct: 558 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 617
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
+ F+ M + K V PN ++ + Y + G++ A E ++ + + Y L+
Sbjct: 618 GQEFFDEM-MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 676
Query: 325 SLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ + EE ++ R + P V + Y A+I ++G + +E + E S
Sbjct: 677 KGMSIISRVEEAKLLFEEMRMEGLEPNVFH--YTALIDGYGKLGQMVKVECLLREMHSKN 734
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ +M+ Y ++GN +A N + E+G P+S +++ G++++ +LEA
Sbjct: 735 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 794
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 138/355 (38%), Gaps = 41/355 (11%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
AL+V+ + N+G F + + L+ E F + D ++ +N
Sbjct: 199 ALDVFPVLANKG-MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 257
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV----ESMV------ 234
A+ + A L KM + G A + + +N ++ YDE E MV
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 317
Query: 235 -------------------------SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
EM +KG +V YN + S GS K +
Sbjct: 318 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 377
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+LM V K ++ +T++T+ Y K GQ + AE L+ + S ++ + ++ L S
Sbjct: 378 DLM-VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 436
Query: 330 VGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
+ R L R++ PG L +IS L + G +++ ++L+ D
Sbjct: 437 HLMFDSALRFVGEMLLRNMSPGGGLL--TTLISGLCKHGKHSKALELWFQFLNKGFVVDT 494
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
R +N ++ + G D+A I+ G + S+ TL G ++++ EA
Sbjct: 495 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 549
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLID 200
++ +D K ++FF + P+T+ VY L+ AY R+ A L +
Sbjct: 603 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV----VYNHLIRAYCRSGRLSMALELRE 658
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
M+ KG + +S Y ++ I +E + + EM+ +G+ +V+ Y + G G
Sbjct: 659 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 718
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
K+E + M K V+PN T++ M Y + G V +A L + + D + Y
Sbjct: 719 QMVKVECLLREMH-SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 777
Query: 321 HYLLSLYGSVGKKEEVYR 338
+ Y G E ++
Sbjct: 778 KEFIYGYLKQGGVLEAFK 795
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 114/269 (42%), Gaps = 9/269 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ RA+ G+A ++ +M KG+ + + YN ++ +++ ++ + M
Sbjct: 321 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 380
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ L +YN + G + E + + M + N N +F+++ +
Sbjct: 381 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM-LSIGFNVNQGSFTSVICLLCSHLM 439
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSV----GKKEEVYRVWNLYRSVFPGVTNL 353
+ A LR V + R+ P LL+ S GK + +W + + V
Sbjct: 440 FDSA---LRFVGEMLL-RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 495
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+A++ L G ++ +I +E L D N ++S + D+A F + +
Sbjct: 496 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 555
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ G KP++ ++ L G ++ EA+
Sbjct: 556 VKRGLKPDNYTYSILICGLFNMNKVEEAI 584
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 123/305 (40%), Gaps = 46/305 (15%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L+++++ A A + D M KG ++ S YN ++ Y K + D E ++ EM
Sbjct: 356 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 415
Query: 238 KEKGIRLDVYSY-NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
G ++ S+ ++ C + V E++ + ++P +T+ + K G
Sbjct: 416 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL--RNMSPGGGLLTTLISGLCKHG 473
Query: 297 QVEKAEE-------------------------------SLRRVESRITGR----DRVPYH 321
+ KA E R++ I GR DRV Y+
Sbjct: 474 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 533
Query: 322 YLLSLYGSVGKK--EEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
L+S G GKK +E + + + R + P N Y +I L + +E + +++
Sbjct: 534 TLIS--GCCGKKKLDEAFMFLDEMVKRGLKP--DNYTYSILICGLFNMNKVEEAIQFWDD 589
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
D ++M+ K ++ + FF+ ++ + +PN+ + L + R R
Sbjct: 590 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 649
Query: 438 ILEAL 442
+ AL
Sbjct: 650 LSMAL 654
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 156/360 (43%), Gaps = 26/360 (7%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L + GG LT ++ L K ++ ALE++ N+G S+A +
Sbjct: 462 LLRNMSPGGGLLTT-----LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL---- 512
Query: 153 IAKVHGVASA---EDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRD 204
HG+ A ++ F + L DR Y L++ + A + +D+M
Sbjct: 513 ----HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
+G + Y++++ + + +E + K G+ DVY+Y++ + C TE+
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
+ F+ M + K V PN ++ + Y + G++ A E ++ + + Y L+
Sbjct: 629 GQEFFDEM-MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 325 SLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ + EE ++ R + P V + Y A+I ++G + +E + E S
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFH--YTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ +M+ Y ++GN +A N + E+G P+S +++ G++++ +LEA
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 138/355 (38%), Gaps = 41/355 (11%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
AL+V+ + N+G F + + L+ E F + D ++ +N
Sbjct: 210 ALDVFPVLANKG-MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 268
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV----ESMV------ 234
A+ + A L KM + G A + + +N ++ YDE E MV
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 235 -------------------------SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
EM +KG +V YN + S GS K +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+LM V K ++ +T++T+ Y K GQ + AE L+ + S ++ + ++ L S
Sbjct: 389 DLM-VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 330 VGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
+ R L R++ PG L +IS L + G +++ ++L+ D
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLL--TTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
R +N ++ + G D+A I+ G + S+ TL G ++++ EA
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLID 200
++ +D K ++FF + P+T+ VY L+ AY R+ A L +
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV----VYNHLIRAYCRSGRLSMALELRE 669
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
M+ KG + +S Y ++ I +E + + EM+ +G+ +V+ Y + G G
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
K+E + M K V+PN T++ M Y + G V +A L + + D + Y
Sbjct: 730 QMVKVECLLREMH-SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 321 HYLLSLYGSVGKKEEVYR 338
+ Y G E ++
Sbjct: 789 KEFIYGYLKQGGVLEAFK 806
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 114/269 (42%), Gaps = 9/269 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ RA+ G+A ++ +M KG+ + + YN ++ +++ ++ + M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ L +YN + G + E + + M + N N +F+++ +
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM-LSIGFNVNQGSFTSVICLLCSHLM 450
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSV----GKKEEVYRVWNLYRSVFPGVTNL 353
+ A LR V + R+ P LL+ S GK + +W + + V
Sbjct: 451 FDSA---LRFVGEMLL-RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 506
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+A++ L G ++ +I +E L D N ++S + D+A F + +
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ G KP++ ++ L G ++ EA+
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 123/305 (40%), Gaps = 46/305 (15%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L+++++ A A + D M KG ++ S YN ++ Y K + D E ++ EM
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 238 KEKGIRLDVYSY-NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
G ++ S+ ++ C + V E++ + ++P +T+ + K G
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL--RNMSPGGGLLTTLISGLCKHG 484
Query: 297 QVEKAEE-------------------------------SLRRVESRITGR----DRVPYH 321
+ KA E R++ I GR DRV Y+
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 322 YLLSLYGSVGKK--EEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
L+S G GKK +E + + + R + P N Y +I L + +E + +++
Sbjct: 545 TLIS--GCCGKKKLDEAFMFLDEMVKRGLKP--DNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
D ++M+ K ++ + FF+ ++ + +PN+ + L + R R
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 438 ILEAL 442
+ AL
Sbjct: 661 LSMAL 665
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 14/349 (4%)
Query: 107 WELC---RVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
+ LC ++ +L KF A ++Y M N G R L + I +++ K V A+
Sbjct: 165 YTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMI--NILCKKGRVQEAK 222
Query: 164 DFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY 221
+ D + Y +L+ + R A + D+M G +S+ Y+ ++
Sbjct: 223 LIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNP 280
+E M+ EM +KGI VY+Y I L S C + S+E +E + ++ K + P
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKK--RGCVP 340
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV- 339
N TF+ + + + G+ E A ++ + V Y+ L++ G+ E + +
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF 400
Query: 340 -WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
W L P Y+ +I +GDI+ IF++ L SS + N ++ Y
Sbjct: 401 KWMLSHGSLPSTQT--YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKG 447
K+GN + A + G KP++ ++ L G R ++ A S G
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+ + AL++ R A L KM G ++ YN ++ ++ ++
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M G +YN + G +K +F+ M + +PN T++T+ Y K G
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM-LKAGSSPNVITYNTLIYGYCKQG 461
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT--NLG 354
+ A L ++ D Y L+S + GK E ++ Y + G++ ++
Sbjct: 462 NLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF--YGMMEHGISPNHVT 519
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP--RIANLMMSWYVKEGNFDKAEAFFNS 412
Y A+I + ++ +F W V+S P + N+M+S + K + +AE F
Sbjct: 520 YTAIIDGYFNLAKVDDALALF--WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577
Query: 413 IIEEGGKPNSTSWETLAEGHIRERR 437
++++G PN ++ + +G R R
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGR 602
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 124/311 (39%), Gaps = 45/311 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ + R +A L M + G + + + Y ++ Y + + D+ ++
Sbjct: 481 DAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M E G +YN+ +S S + E M V + + PN T+++ +
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM-VKQGLLPNVITYTSFIDGLCR 599
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL------------ 342
G+ A + +E R + Y L+ G+ E+ ++NL
Sbjct: 600 NGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPN 658
Query: 343 ---YRSVFPGVTNLG--YHA--MISSLARIGDIEGMEKIF-------------EEWLSVK 382
Y ++ G+ G Y A ++ S+ + G ++ E+I+ E L++
Sbjct: 659 VDTYTTLVKGLCGEGRCYEADQLVVSMQKKG-LQPSEEIYRALLIGECKNLKVESALNIF 717
Query: 383 SSYDPRIANLMMSWY-------VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
S D L +S Y KE ++A+ F +++E+ + +W L +G ++E
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKE 777
Query: 436 RRILEALSCLK 446
E CLK
Sbjct: 778 G---ETDLCLK 785
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 151/327 (46%), Gaps = 5/327 (1%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
L +LC VVK + ++ ALE+Y+ +N + + A+ L ++ + + A+
Sbjct: 54 LAPTDLCYVVKRVAN-TSWQRALELYECLN-VARWYAPNPRMLAVMLSVLGRANQPGLAQ 111
Query: 164 DFFLSLPDTLKD-RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
+ F ++ + +VY +L++ Y R + + L+ +M+D+G + +N+++
Sbjct: 112 ELFDRAESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKART 171
Query: 223 KIKEYDEV-ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
+ + + S++ ++ G+R D +YN +S+C +FE M+ + +P+
Sbjct: 172 RGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQ-RQGCDPD 230
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
T++ M ++Y + G+VE A R ++ + D V Y+ +L + G+ EEV R+
Sbjct: 231 IWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRG 290
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ R + Y+ MI + G E+++ + D +++ K G
Sbjct: 291 MMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAG 350
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETL 428
++A A F +++ +P ++ +
Sbjct: 351 FVNEAAAMFEDMLKSQVRPTLQAFSAM 377
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 118/255 (46%), Gaps = 3/255 (1%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDK-GYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
R+ +L+ RA G A+ L D+ G V YN +M++Y + +++ V+ ++
Sbjct: 92 RMLAVMLSVLGRANQPGLAQELFDRAESSIGNCVQV--YNSLMSVYARHGDWNSVQQLLC 149
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
M+++G R D+ ++NI + + G E + + P+ T++T+ +
Sbjct: 150 RMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLN 209
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
++ A ++ + D Y+ ++S+YG G+ E ++ + + + Y
Sbjct: 210 NRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTY 269
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
++++ + AR G IE +E+I + S D N M+ Y K G KAE + + E
Sbjct: 270 NSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKE 329
Query: 416 EGGKPNSTSWETLAE 430
EG P+S ++ L +
Sbjct: 330 EGRCPDSVTFTVLID 344
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 120/266 (45%), Gaps = 9/266 (3%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+KD ++ A++ +Y + ++ NAE++ ++ G+A ++ Y+ +++ Y + ++
Sbjct: 643 VKDSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATR 702
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ M G++ + N L + G G +++ F+ + + ++PN TF + +
Sbjct: 703 ALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLP-EMGISPNSRTFVVIFHAF 761
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV-YRVWNLYRSVFPGVT 351
+ G +E+A R+++ + LL+LY +E V L + +
Sbjct: 762 SRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYS----RETVEIDAEELVKDIKKAGL 817
Query: 352 NLG---YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
L Y+ MIS +++G +F+ + S D N ++ Y + +A+A
Sbjct: 818 ELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQA 877
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIR 434
+I+ G PN +++ TL + R
Sbjct: 878 LLREMIKTGNAPNISTYTTLISAYGR 903
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+ Y R +M A+ L+ +M G A + Y +++ Y +++ Y++ E +
Sbjct: 855 DATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVF 914
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ E G + D +YN+ ++ G K+E + E MKVD P+ TT + Y K
Sbjct: 915 KSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVD-GFEPSLTTIHMLMDSYGK 973
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
G KAEE L + D + Y +++
Sbjct: 974 GGATGKAEEVLETLPEIGMSPDAIHYTSIIN 1004
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 123/266 (46%), Gaps = 1/266 (0%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
R + L++AY R R NA + D+M G+ YN ++++ + ++ +S+++
Sbjct: 468 RDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIIN 527
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+MK +G + + SY++ L G+ +E + E + V P+W T+ K
Sbjct: 528 KMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAI-EKEVYEGTVFPSWVILRTLVISNFKC 586
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
++E E + + V +R D V ++ +LS+Y G + +++ + + Y
Sbjct: 587 RRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITY 646
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
++M+ A+ + EKI + + + D N +M+ + K+G +A+ + +I
Sbjct: 647 NSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIA 706
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
+G +P ++ TL G+ EA
Sbjct: 707 DGVRPCVVTYHTLVGGYASREMFSEA 732
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ALL + +A A ++ +M + G ++ YN + Y + Y+E + M
Sbjct: 295 TYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTM 354
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KGI + ++YN +++ G+ G ++ +F+ MK + + P T++ + M K +
Sbjct: 355 VSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFI-PYVNTYNLILGMLGKKSR 413
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E L + +RV ++ +L++ G G + V RV +S + ++
Sbjct: 414 FNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNT 473
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+IS+ R G K+++E + + N ++S ++G++ A++ N + EG
Sbjct: 474 LISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEG 533
Query: 418 GKPNSTSWETLAEGHIR 434
KPN S+ L + H +
Sbjct: 534 FKPNDMSYSLLLQCHAK 550
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 130/284 (45%), Gaps = 21/284 (7%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI-KEYDEVESM 233
D R Y +L+A A L +++ +G A + YNVM+ +Y ++ + + ++ +M
Sbjct: 186 DVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAM 245
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EM+ G+ D ++ + +++CG G ++ FE +K V P T++ + ++
Sbjct: 246 LEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHV-PCVVTYNALLQVFG 304
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVT 351
K G +A L+ +E D V Y+ L Y G EE + + + + + P
Sbjct: 305 KAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNA- 363
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAF 409
Y+ ++++ G ++ +F +W+ K+ + P + NL++ K+ F+
Sbjct: 364 -FTYNTIMTAYGNAGKVDEALALF-DWMK-KNGFIPYVNTYNLILGMLGKKSRFNVMLEM 420
Query: 410 FNSIIEEGGKPNSTSWETL--------AEGHIRERRILEAL-SC 444
+ G PN +W T+ EG++ R+LE + SC
Sbjct: 421 LGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYV--TRVLERMKSC 462
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 11/291 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L +Y RA A +D M KG ++ YN +MT Y + DE ++
Sbjct: 327 DAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALF 386
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM-EGVFELMKVDKAVNPNWTTFSTMATMYI 293
MK+ G V +YN+ L G + M E + E+ + PN T++TM +
Sbjct: 387 DWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSR--SGCTPNRVTWNTMLAVCG 444
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV--FPGVT 351
K G L R++S R ++ L+S YG G + +++++ + P +T
Sbjct: 445 KRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLT 504
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y+A++S L+R GD + I + + + +L++ + K GN EA
Sbjct: 505 T--YNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEK 562
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
+ E P+ TL + + RR L ++ AF A+ +P V
Sbjct: 563 EVYEGTVFPSWVILRTLVISNFKCRR----LEGIERAFQEVMARGHKPDLV 609
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 126/315 (40%), Gaps = 48/315 (15%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L + Y ++ AY A A L D M+ G+ + YN+++ + K ++ +
Sbjct: 360 LPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLE 419
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK------------------- 273
M+ EM G + ++N L+ CG +G + V E MK
Sbjct: 420 MLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYG 479
Query: 274 ---------------VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
P TT++ + ++ + G A+ + ++++ + +
Sbjct: 480 RCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDM 539
Query: 319 PYHYLLSLYGSVGK-------KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
Y LL + G ++EVY +VFP L ++ S + +EG+
Sbjct: 540 SYSLLLQCHAKGGNAAGIEAIEKEVYE-----GTVFPSWVIL--RTLVISNFKCRRLEGI 592
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
E+ F+E ++ D I N M+S Y K G + KA F+SI + G P+ ++ ++ +
Sbjct: 593 ERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDM 652
Query: 432 HIRERRILEALSCLK 446
+ + EA LK
Sbjct: 653 YAKSNESWEAEKILK 667
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ++ ++L+ Y + M A + D ++ G + + YN MM +Y K E E E ++
Sbjct: 607 DLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKIL 666
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+K ++ DV SYN ++ QG ++ + + M D V P T+ T+ Y
Sbjct: 667 KRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIAD-GVRPCVVTYHTLVGGYAS 725
Query: 295 MGQVEKAEE 303
+A E
Sbjct: 726 REMFSEARE 734
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 121/269 (44%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY A+++A + A + +M ++G + + +N +++ + ++E + + +EM
Sbjct: 192 VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEM 251
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+E+GI D +YN +++ G + E M + P+ T+STM Y K+G
Sbjct: 252 EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGL 311
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+A + + ++ D + Y+ ++ ++ +G +E + + + Y+A
Sbjct: 312 AHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNA 371
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ S + G + EE +S + + ++ Y K G A A F + + G
Sbjct: 372 LLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAG 431
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLK 446
+P+ + TL +G + EAL+ L+
Sbjct: 432 LQPDVVLYSTLVDGCCKNGSPDEALALLE 460
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 116/262 (44%), Gaps = 2/262 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR + L++A RA + + +M ++G A + YN ++ Y + + +++
Sbjct: 224 DRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALM 283
Query: 235 SEM-KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
M K GI V +Y+ + G + +F+ M+ ++ V P+ ++TM ++
Sbjct: 284 ETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMR-NQNVEPDGICYNTMVDIHA 342
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
++G ++A R +E +D V Y+ LL YG GK E + + L
Sbjct: 343 RLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL 402
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y A+I + + G +F++ D + + ++ K G+ D+A A +
Sbjct: 403 TYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEM 462
Query: 414 IEEGGKPNSTSWETLAEGHIRE 435
+ G +PN ++ +L + + R+
Sbjct: 463 ADNGIRPNVITYNSLLDAYGRQ 484
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 5/205 (2%)
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G +V+ Y+ + + G G K +FE MKV PN ++ + K G
Sbjct: 151 GFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV--VCKPNLVVYNAVIDACSKGGDYPT 208
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A R + + DR+ ++ L+S G + EE R++ ++ Y+ +I+
Sbjct: 209 ALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIA 268
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ R G + + E ++ S +P + + M+ Y K G +A A F + +
Sbjct: 269 TYCRGGQMH-LGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNV 327
Query: 419 KPNSTSWETLAEGHIRERRILEALS 443
+P+ + T+ + H R EA S
Sbjct: 328 EPDGICYNTMVDIHARLGNFDEAHS 352
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 85/234 (36%), Gaps = 55/234 (23%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y AL++AY + +A L ++ G + Y+ ++ K DE +++ EM
Sbjct: 403 TYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEM 462
Query: 238 KEKGIRLDVYSYNIWLSSCGSQ-----------------------------------GST 262
+ GIR +V +YN L + G Q
Sbjct: 463 ADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPK 522
Query: 263 EKMEGVFELMKV-----DKAVNPNWTTFSTMATMYIKMGQVEKAE---ESLRRVESRITG 314
+K V +V V PN TFS++ VE A E++R + R+ G
Sbjct: 523 QKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAMRVFDGRVYG 582
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDI 368
V + L+ RVW ++F +T LG++ ++ + D+
Sbjct: 583 ---VTHGLLMGFR---------IRVWRDAETLFNELTTLGHNTAVAFYNALTDV 624
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 15/301 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL+N + + +A ++D+MR K ++ ++ YN+M+ + D ++
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+++ + V +Y I + + +G ++ + + M + + + P+ T++T+ K
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYNTIIRGMCK 275
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G V++A E +R +E + D + Y+ LL + GK EE ++ S +
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 355 YHAMISSLARIGDIEGMEKIF----EEWLSVKS-SYDPRIANLMMSWYVKEGNFDKAEAF 409
Y +I++L R G IE + E+ L+ + SYDP IA + +EG D A F
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA-----AFCREGRLDVAIEF 390
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFK 469
++I +G P+ ++ T+ + + +AL F G P + F
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALE----IFGKLGEVGCSPNSSSYNTMFS 446
Query: 470 A 470
A
Sbjct: 447 A 447
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 8/307 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+D+M +G YN ++ K D MV ++ KG DV SYNI L +
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+QG E+ E + M +K +PN T+S + T + G++E+A L+ ++ + D
Sbjct: 310 NQGKWEEGEKLMTKMFSEKC-DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
Y L++ + G+ + S P + N Y+ ++++L + G + +IF
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN--YNTVLATLCKNGKADQALEIF 426
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+ V S + N M S G+ +A ++ G P+ ++ ++ RE
Sbjct: 427 GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCRE 486
Query: 436 RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKE 495
+ EA L + E S + ++ F KA E + E+ V +P E
Sbjct: 487 GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP---NE 543
Query: 496 KDYMSLI 502
Y LI
Sbjct: 544 TTYTVLI 550
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 119/266 (44%), Gaps = 13/266 (4%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y LL A + E L+ KM + + + Y++++T + + +E
Sbjct: 296 PDVIS----YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+++ MKEKG+ D YSY+ +++ +G + E M D + P+ ++T+
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL-PDIVNYNTVL 410
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K G+ ++A E ++ + Y+ + S S G K + S
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470
Query: 350 VTNLGYHAMISSLARIGDIEGM-EKIFEEWLSVKSS-YDPRIA--NLMMSWYVKEGNFDK 405
+ Y++MIS L R EGM ++ FE + ++S + P + N+++ + K +
Sbjct: 471 PDEITYNSMISCLCR----EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEG 431
A S++ G +PN T++ L EG
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIEG 552
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 122/273 (44%), Gaps = 3/273 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++ + M A ++ + KG + YN+++ + +++E E ++
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M + +V +Y+I +++ G E+ + +LMK +K + P+ ++ + + +
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK-EKGLTPDAYSYDPLIAAFCR 380
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+++ A E L + S D V Y+ +L+ GK ++ ++ V +
Sbjct: 381 EGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440
Query: 355 YHAMISSLARIGD-IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ M S+L GD I + I E +S D N M+S +EG D+A +
Sbjct: 441 YNTMFSALWSSGDKIRALHMIL-EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
P+ ++ + G + RI +A++ L+
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 262 TEKMEGVFELMKVDKAV----------NPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
T+ ++G F L + KAV P+ ++ + + KM +++ A L R+ S+
Sbjct: 128 TKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 187
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
D V Y+ ++ S GK + +V N S T + Y +I + G ++
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
K+ +E LS D N ++ KEG D+A ++ +G +P+ S+ L
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 3/191 (1%)
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
D I+ SC S E + + E M V K NP+ + + + + + KA
Sbjct: 89 DTQMLKIFHRSCRSGNYIESLH-LLETM-VRKGYNPDVILCTKLIKGFFTLRNIPKAVRV 146
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
+ +E + D Y+ L++ + + + ++ RV + RS + Y+ MI SL
Sbjct: 147 MEILE-KFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
G ++ K+ + LS +++ + EG D+A + ++ G KP+ +
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 425 WETLAEGHIRE 435
+ T+ G +E
Sbjct: 266 YNTIIRGMCKE 276
>gi|115456691|ref|NP_001051946.1| Os03g0856100 [Oryza sativa Japonica Group]
gi|41393252|gb|AAS01975.1| putative chloroplastic RNA-binding protein, with alternative
splicing isoforms [Oryza sativa Japonica Group]
gi|113550417|dbj|BAF13860.1| Os03g0856100 [Oryza sativa Japonica Group]
gi|222626198|gb|EEE60330.1| hypothetical protein OsJ_13428 [Oryza sativa Japonica Group]
Length = 640
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 52/289 (17%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y A+L+ Y + M+ L D+ R G+ + + V+ ++ + +YD ++
Sbjct: 179 VLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQ 238
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EM+E GI+ +++ YN L + G G +FE M + V PN T + +A +
Sbjct: 239 FVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMTAE-GVEPNARTLTALAKI 297
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
Y GR R +G + ++W R
Sbjct: 298 Y---------------------GRAR---------WG-----RDALQLWEQMREKKLPAD 322
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL----------MMSWYVKEG 401
N+ + ++S A +G + E++F E DP + ++ M++ Y G
Sbjct: 323 NILCNTLLSMCADVGLVGEAEQLFSEM------KDPDLGDVPKPDKWSYTAMINIYGSSG 376
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
+ D+A F ++E G +PN S+ + + + RI EA+ L+ A
Sbjct: 377 DADRALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMA 425
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 114/295 (38%), Gaps = 51/295 (17%)
Query: 145 DAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELL--IDKM 202
DAA DL +H DFF P LL Y+ R + LL + +
Sbjct: 56 DAA---DLAPTLH------DFF---PPASPPSTSDALLLLNYLHPSWRKSLSLLCWLRAL 103
Query: 203 RDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST 262
D + + ++ +NV + +++ + E + +M G+ LD NI
Sbjct: 104 PDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLD----NI----------- 148
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV-ESRITGRDRVPYH 321
T+ST+ T + Q +KA E R+ S D V Y
Sbjct: 149 ---------------------TYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYS 187
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+L +Y +G KEEV +++ R ++ + + GD +G++ +F+E V
Sbjct: 188 AILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREV 247
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ + N ++ K G A F + EG +PN+ + LA+ + R R
Sbjct: 248 GIKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRAR 302
>gi|302823876|ref|XP_002993586.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
gi|300138598|gb|EFJ05361.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
Length = 451
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 41/282 (14%)
Query: 178 VYGALLNAYVRARMRGNAE-LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y L A +A + AE L ++ +R + + +N +M Y K Y ++E + E
Sbjct: 173 TYNMLTRACAQAGLTDKAEALFLELLRREDLKPDAYTFNGIMDAYAKKGLYRDMEYKLKE 232
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M E G+R D+ ++N+ + + G G KME ++ + P+ TTF++M Y +
Sbjct: 233 MSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLVNLSGCKPSATTFNSMLASYGQSR 292
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++ K E+ L R++ G D ++ L+S YG
Sbjct: 293 ELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYG---------------------------- 324
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSII 414
R G+++ M K F++ V+S P+++ L ++ Y + G D+AEA F +
Sbjct: 325 -------RAGELDTMRKCFDKM--VRSPVKPQVSTLDVLLRAYAEHGLVDEAEALFINAS 375
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS 456
+ KP +S+ L + + ER+ L+ ++ L G +S
Sbjct: 376 KLDIKPAVSSYLILFKAYGEERQ-LDKMTVLMSKMEQSGVES 416
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/433 (19%), Positives = 165/433 (38%), Gaps = 50/433 (11%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
A+ R L + + + + VL+ + R + +V E+ + + AL ++ W+
Sbjct: 31 AVMRILHELQDKKSSKSHVLDKY---ARHIPVDGFMALVDEIGRLNDWALALALFKWLQK 87
Query: 135 RGERFR---LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARM 191
R L + A I +D + K + A F L + + V A++ A++R +
Sbjct: 88 NEARLSNRDLEVAHAKI-IDTMGKQGQLRLASWIFSQLQLSSRTTPVLNAIIMAHLRCKN 146
Query: 192 RGNA-ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
A + +D +VHS P + +YN
Sbjct: 147 VARALDSALDHFGHMKTSVHSCP-------------------------------SLATYN 175
Query: 251 IWLSSCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
+ +C G T+K E +F EL++ + + P+ TF+ + Y K G E L+ +
Sbjct: 176 MLTRACAQAGLTDKAEALFLELLRRED-LKPDAYTFNGIMDAYAKKGLYRDMEYKLKEMS 234
Query: 310 SRITGRDRVPYHYLLSLYGSVG---KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIG 366
D V ++ L+ YG G K E Y+ P T +++M++S +
Sbjct: 235 EHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLVNLSGCKPSATT--FNSMLASYGQSR 292
Query: 367 DIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWE 426
++ ME++ D N +MS Y + G D F+ ++ KP ++ +
Sbjct: 293 ELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYGRAGELDTMRKCFDKMVRSPVKPQVSTLD 352
Query: 427 TLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVAL 486
L + + EA + F +P + + FKA EE + ++
Sbjct: 353 VLLRAYAEHGLVDEA----EALFINASKLDIKPAVSSYLILFKAYGEERQLDKMTVLMSK 408
Query: 487 LRQPGYRKEKDYM 499
+ Q G ++++
Sbjct: 409 MEQSGVESGQEFL 421
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 120/237 (50%), Gaps = 19/237 (8%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
Y +++ + + DEVE M EM EKGI+ D++ Y + ++ G+T++ +F+ +
Sbjct: 4 YTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL- 62
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+K + N T+ + K G++E AE + +++R +++ Y+ L+ Y G
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLI 122
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE-----EWL--SVKSSYD 386
+E ++V + + G+ I +L I D G+ K+ + WL ++
Sbjct: 123 DEAFKVQVI-------MEKKGFENDIYTLNTIAD--GLRKLNQPEEAKRWLLTMIEKGVV 173
Query: 387 PRIAN--LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
P + + ++ Y KEGNF +A+ F + + GG+PN+ ++ L +GH ++ R+ EA
Sbjct: 174 PNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEA 230
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 119/253 (47%), Gaps = 5/253 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGAL++ +A AE+L+++M+ +G V+ L YN ++ Y K DE + M+
Sbjct: 74 YGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIME 133
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KG D+Y+ N E+ + + L ++K V PN +++T+ +Y K G
Sbjct: 134 KKGFENDIYTLNTIADGLRKLNQPEEAKR-WLLTMIEKGVVPNVVSYTTLIDIYCKEGNF 192
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYH 356
+A++ + ++ + V Y+ L+ + G+ +E Y + + R+ +FP + Y
Sbjct: 193 VEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYT--YT 250
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+++ G ++ ++F E + ++S KEG ++A ++ + E
Sbjct: 251 SLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEA 310
Query: 417 GGKPNSTSWETLA 429
G P+ + +L
Sbjct: 311 GLTPDDRVYTSLV 323
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 195/454 (42%), Gaps = 25/454 (5%)
Query: 75 AIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNN 134
+ KLS + P GS + D K SL + L V KE + ++ +L ++ M
Sbjct: 80 TLINKLSSL--PPRGSIARCLDVFKNKLSLNDFAL--VFKEFAQRGDWQRSLRLFKHMQ- 134
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYVRARMR 192
R + + I + L+ + + D F + R V Y AL+N+Y R
Sbjct: 135 RQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKY 194
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNI 251
+ L+++M+ + + L YN ++ + +++ + + +EM+ +GI+ D+ +YN
Sbjct: 195 EVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNT 254
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
L +C ++G ++ E VF M + V P+ TT++ + + K+ +++K E L+ + S
Sbjct: 255 LLCACSNRGLGDEAEMVFRTMN-EGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMAST 313
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
+ Y+ LL Y +G E+ V+ L + Y ++ + G + +
Sbjct: 314 GNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEV 373
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL--- 428
++F E + D N ++ + + G F + F+ + EE +PN ++E L
Sbjct: 374 RELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFA 433
Query: 429 -AEG-----------HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESD 476
+G H+ E+ ++ + G A G + + + +N +
Sbjct: 434 CGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPT 493
Query: 477 MGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVA 510
+ + + + + G KE + + L+ + D VA
Sbjct: 494 IETYNTLIYMFARGGLYKETEAI-LLKMGDFGVA 526
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 113/281 (40%), Gaps = 21/281 (7%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y L++ + + L+ +M G YNV++ Y +I ++
Sbjct: 280 VVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDAT 339
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ M+E G + +Y+I L G G +++ +F MKV P+ T++T+ +
Sbjct: 340 GVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNT-EPDAATYNTLIDV 398
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
+ + G ++ + + Y L+ G G ++ ++ +
Sbjct: 399 FGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKI----------LL 448
Query: 352 NLGYHAMI-SSLARIGDIE--GMEKIFEEWLSVKSSYD-----PRIA--NLMMSWYVKEG 401
++ MI SS A G IE G ++EE L ++ + P I N ++ + + G
Sbjct: 449 HMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGG 508
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ + EA + + G S+ + EG + + EA+
Sbjct: 509 LYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAI 549
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 122/259 (47%), Gaps = 7/259 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM- 237
+ AL+ AY R R NAE + +M+ G +L Y +M+ +++ ++ E E + +
Sbjct: 176 HTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLL 235
Query: 238 -KEKGI-RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
KEK + + D +++ + G+ EK VF M + V T++++ +
Sbjct: 236 NKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAA-RGVPQTTVTYNSLMSFETNY 294
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+V K + ++R + D V Y L+S YG ++EE V+ T+ Y
Sbjct: 295 KEVSKIYDQMQRAGLQ---PDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAY 351
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ ++ + A G +E + +F+ + S D M+S YV + + AE FF + +
Sbjct: 352 NILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQ 411
Query: 416 EGGKPNSTSWETLAEGHIR 434
+G +PN ++ TL +G+ +
Sbjct: 412 DGFRPNVVTYGTLIKGYAK 430
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 144/346 (41%), Gaps = 21/346 (6%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
VLN K G + +++ + RRY +A ++ M + G SA I L
Sbjct: 160 VLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPE--PSALTYQIMLKT 217
Query: 153 IAKVHGVASAEDFFLSL-----PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+ AE+ F SL P D++++ ++ + +A A + +M +G
Sbjct: 218 FVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGV 277
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
++ YN +M+ Y EV + +M+ G++ DV SY + +S+ G E+
Sbjct: 278 PQTTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLISAYGKARREEEALA 334
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
VFE M +D + P ++ + + G VE+A+ + ++ D Y +LS Y
Sbjct: 335 VFEEM-LDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAY 393
Query: 328 GSVGKKEEVYRVWNLYRSV-----FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ E N +R + P V Y +I A+I ++E M K +EE
Sbjct: 394 VNASDMEGAE---NFFRRLKQDGFRPNVVT--YGTLIKGYAKINNLEKMIKRYEEMKVNG 448
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ I +M Y K +F A +FN I G +P+ + L
Sbjct: 449 IRVNQTILTTIMDAYGKNKDFGSAVIWFNEIESCGLRPDQKAKNIL 494
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 123/314 (39%), Gaps = 44/314 (14%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L+ AY + AE +++ M KGYA + + + +M Y + + Y+ E++ M+ G
Sbjct: 144 LITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGG 203
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFE--LMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+Y I L + ++ E +F+ L K + P+ F + M+ K G E
Sbjct: 204 PEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYE 263
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
KA + + +R + V Y+ L+S + +EV ++++ + + Y +I
Sbjct: 264 KARKVFAEMAARGVPQTTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLI 320
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
S+ + E +FEE L + N+++ + G ++A+ F S+ +
Sbjct: 321 SAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCS 380
Query: 420 PNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGS 479
P+ S+ T+ ++ SDM
Sbjct: 381 PDICSYTTMLSAYV---------------------------------------NASDMEG 401
Query: 480 KEAFVALLRQPGYR 493
E F L+Q G+R
Sbjct: 402 AENFFRRLKQDGFR 415
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 13/211 (6%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD------ 175
YK ++YD M G + L+ +G A E+ L++ + + D
Sbjct: 294 YKEVSKIYDQMQRAG------LQPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPT 347
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ Y LL+A+ + M A+++ M+ + Y M++ Y+ + + E+
Sbjct: 348 HKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFR 407
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+K+ G R +V +Y + + EKM +E MKV+ + N T +T+ Y K
Sbjct: 408 RLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVN-GIRVNQTILTTIMDAYGKN 466
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
A +ES D+ + LLSL
Sbjct: 467 KDFGSAVIWFNEIESCGLRPDQKAKNILLSL 497
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 145/350 (41%), Gaps = 36/350 (10%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
FL + + Y +L++ + +A A +LI+KM ++G S Y+V++ K K
Sbjct: 496 FLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQK 555
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ +E S++ +M G++ ++ +Y I +S +G + + +F M + P+ TT+
Sbjct: 556 KLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEM-ISSGHKPSATTY 614
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ + Y K+GQ+E+AE + +E D V Y+ ++ G +G + +
Sbjct: 615 TVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAF-------- 666
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK-----SSYDPRIANLMMSWYVKE 400
S+L R+ D + W+ +K S D + W E
Sbjct: 667 --------------STLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIE 712
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPK 460
D +++ G P + ++ ++ G + R+ EA C+ F K P
Sbjct: 713 --LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEA--CV--LFDHMRGKDISPN 766
Query: 461 PVNVINFFKACEEESDMGSKEAFVALLRQPGYRK--EKDYMSLIGLTDEA 508
K C + G +FV + + G++ E + ++GL DE
Sbjct: 767 EEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEG 816
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 132/359 (36%), Gaps = 45/359 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + YG L+N ++ A+ + +M G A + + Y ++ Y K+ + +
Sbjct: 333 DLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVF 392
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M+ +G R + ++Y+ + K + M+ D + P T++T+ K
Sbjct: 393 RLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED-GITPGVITYTTLIQGQCK 451
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+ + A +E D Y+ L G+ EE Y V VT
Sbjct: 452 KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVT--- 508
Query: 355 YHAMISSLARIGD-------IEGM---------------------EKIFEEWLSV----- 381
Y +++ ++ G+ IE M +K E LS+
Sbjct: 509 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMT 568
Query: 382 KSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
S I +++S +KEG D A++ FN +I G KP++T++ + + +I
Sbjct: 569 LSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIE 628
Query: 440 EALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDY 498
EA L G +G P V F C M AF L R E +Y
Sbjct: 629 EAEH-LIGEMERDGVA---PDVVTYNVFINGCGHMGYM--DRAFSTLKRMIDASCEPNY 681
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 109/268 (40%), Gaps = 12/268 (4%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
++N Y +A +A + M + Y V++ + +K + E + VSEM G
Sbjct: 305 IINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANG 364
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ +V Y + G VF LM+ + PN T+S++ I+ ++ KA
Sbjct: 365 LAPNVVIYTSIIDGYCKVGKVGAALEVFRLME-HEGCRPNAWTYSSLIYGLIQDQKLHKA 423
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKE--EVYRVWNLYRSVFPGVTNLGYHAMI 359
+ +++ + Y L+ G K E +R++ + Y+ +
Sbjct: 424 MALITKMQEDGITPGVITYTTLIQ--GQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 481
Query: 360 SSLARIGDIEGMEKIF--EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+L + G E + + K +Y ++ + K GN D A ++ EG
Sbjct: 482 HALCKSGRAEEAYSFLVRKGVVLTKVTYTS-----LVDGFSKAGNTDFAAVLIEKMVNEG 536
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCL 445
K +S ++ L + +++++ EALS L
Sbjct: 537 CKADSYTYSVLLQALCKQKKLNEALSIL 564
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 144/359 (40%), Gaps = 44/359 (12%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL---PDTLKD------ 175
AL ++W+ R FR +A+ A L L+A+ A+ + +S+ DT +D
Sbjct: 71 ALAFFEWVARR-PGFRHTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTAEDMREAVD 129
Query: 176 -----RRV-------------------------YGALLNAYVRARMRGNAELLIDKMRDK 205
RRV Y L+ R A +L+ M
Sbjct: 130 AIQAIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQD 189
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G +++ Y +++ K ++ EM +G+ V++YN + G +
Sbjct: 190 GCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA 249
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ-VEKAEESLRRVESRITGRDRVPYHYLL 324
G+ LM+ + NP+ T++ + +Y G+ ++AEE L R + + ++
Sbjct: 250 LGIKALMERN-GCNPDDWTYNIL--IYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNII 306
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
+ Y + ++ RV S + Y +I+ L + + ++ E + +
Sbjct: 307 NGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLA 366
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ I ++ Y K G A F + EG +PN+ ++ +L G I+++++ +A++
Sbjct: 367 PNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMA 425
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 147/346 (42%), Gaps = 19/346 (5%)
Query: 105 TKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAED 164
+K+ + ++ K LE+++ M + +R + + +D + KV + AE
Sbjct: 551 SKFMYGKAIQAAVKLSDVGKGLELFNRMKH--DRISPTVFIYNVLIDGLCKVRQMKDAEQ 608
Query: 165 FFLSLPDTLKDRRV------YGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYN 215
F D + RR+ Y L++ Y + GN E + ++M+ + +N
Sbjct: 609 LF----DEMLARRLLPSLITYNTLIDGYCK---DGNPEKSFKVRERMKADNIEPSLITFN 661
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ K ++ E++++EMK++G D ++++I S + GV+E VD
Sbjct: 662 TLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYE-TAVD 720
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ N T S + K GQ+EKAEE L R ++ + V Y+ ++ Y G
Sbjct: 721 SGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVG 780
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMS 395
+ +L Y+ +I + +GD+E E+ + S N+++
Sbjct: 781 ARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIG 840
Query: 396 WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
Y ++ FDK + + G PN S+ TL + ++LEA
Sbjct: 841 GYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 886
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 129/298 (43%), Gaps = 7/298 (2%)
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMR 192
R E S+ + LD + K + FL++ D + +YG + A V+
Sbjct: 509 RNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDV 568
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
G L ++M+ + YNV++ K+++ + E + EM + + + +YN
Sbjct: 569 GKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTL 628
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+ G+ EK V E MK D + P+ TF+T+ K G VE AE L ++ +
Sbjct: 629 IDGYCKDGNPEKSFKVRERMKADN-IEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQG 687
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA--MISSLARIGDIEG 370
D + L Y S K + V+ +V G+ Y ++++L + G IE
Sbjct: 688 FVPDAFTFSILFDGYSSNDKADAALGVYE--TAVDSGLKMNAYTCSILLNALCKEGQIEK 745
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
E+I ++ + + N M+ Y ++G+ A +++ ++G KP+ ++ L
Sbjct: 746 AEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCL 803
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 131/308 (42%), Gaps = 9/308 (2%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLS--LPDTLKDRRVYGAL 182
AL VY+ + G +++A +I L+ + K + AE+ + + +Y +
Sbjct: 711 ALGVYETAVDSG--LKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTM 768
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
++ Y R A + ID M +G L YN ++ + ++ + + E V++MK KG+
Sbjct: 769 IDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGV 828
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEK 300
V +YNI + G G + + F+L+K D PN ++ T+ K ++ +
Sbjct: 829 SPSVETYNILI---GGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 885
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A+ R +E R + Y+ L+ S GK E+ +R + + Y+ +I
Sbjct: 886 AQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLID 945
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
L+ G + E + E D N ++S Y GN + A + + G KP
Sbjct: 946 GLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKP 1005
Query: 421 NSTSWETL 428
++ L
Sbjct: 1006 TLKTYHLL 1013
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 122/270 (45%), Gaps = 9/270 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ Y R L+ +M D G + + Y ++ K + E + + +M
Sbjct: 834 TYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 893
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKM 295
+++G+ +V YN+ + C S+G K+E F + K + N T++T+
Sbjct: 894 EDRGVSPNVRIYNMLIDGCCSKG---KIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMN 950
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G++ +AE+ L + + D Y+ L+S Y G + ++ ++ T Y
Sbjct: 951 GKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTY 1010
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
H +IS + G IE +KIF E +S++ D + N ++ Y G+ DKA +IE
Sbjct: 1011 HLLISLCTKEG-IELTKKIFGE-MSLQP--DLLVYNGVLHCYAVHGDMDKAFNLQKQMIE 1066
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ + T++ +L G ++ ++ E S +
Sbjct: 1067 KSIGLDKTTYNSLILGQLKVGKLCEVRSLI 1096
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 161/387 (41%), Gaps = 39/387 (10%)
Query: 89 GSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI 148
++S+LN+ K G L + ++ RY+ A+ V+ M G + L + +
Sbjct: 200 AASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVIL 259
Query: 149 QL---------DLIAKVHGVASA----EDFF-----------------------LSLPDT 172
+ + VHG+ S+ +D+ + L
Sbjct: 260 NVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGF 319
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
D+ + LL+ Y ++R A ++ +M G++ + YN +++ Y + E
Sbjct: 320 SPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAME 379
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ +M EKGI+ DV++Y LS G E +F M+ PN TF+ + M+
Sbjct: 380 LKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRA-AGCKPNICTFNALIKMH 438
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVT 351
G+ + + +E D V ++ LL+++G G EV V+ + R+ F
Sbjct: 439 GNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 498
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ ++ +IS+ +R G + +++ L + D N +++ + G ++++E F
Sbjct: 499 DT-FNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFA 557
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRI 438
+ + KPN ++ +L + + I
Sbjct: 558 EMKDGRCKPNELTYCSLLHAYANSKEI 584
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 116/274 (42%), Gaps = 16/274 (5%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + LL + + M + +M+ G+ +N +++ Y + + + ++
Sbjct: 462 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVY 521
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M E G+ D+ SYN L++ G E+ E VF MK D PN T+ ++ Y
Sbjct: 522 KRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMK-DGRCKPNELTYCSLLHAYAN 580
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK-----EEVYRVWNLYRSVFPG 349
++E+ + S +T P LL V K E + L + P
Sbjct: 581 SKEIERMHTLAEEIYSGLTE----PVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPD 636
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAE 407
++ L +AMI+ R + +I +S + P +A N +M + + NF+++E
Sbjct: 637 LSTL--NAMIAIYGRRQMVAKANEILN--FMNESGFSPSLATYNSLMYMHSRSENFERSE 692
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
I+ +G KP+ S+ T+ + R R+ +A
Sbjct: 693 EVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDA 726
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 150/405 (37%), Gaps = 55/405 (13%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+A V + + G S K ++ K RR K A+EV M G + ++ I
Sbjct: 307 AAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLIS 366
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRV----------YGALLNAYVRARMRGNAELLI 199
A A D L LKD+ V Y LL+ + +A M A +
Sbjct: 367 ----------AYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIF 416
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
+MR G + +N ++ ++ + E+ + E++ D+ ++N L+ G
Sbjct: 417 GEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQN 476
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G ++ GVF+ MK V P TF+T+ + Y + G ++A +R+ D
Sbjct: 477 GMDSEVSGVFKEMKRAGFV-PERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSS 535
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW- 378
Y+ +L+ G E+ +V+ + L Y +++ + A +IE M + EE
Sbjct: 536 YNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIY 595
Query: 379 ---------------------------------LSVKSSYDPRIANLMMSWYVKEGNFDK 405
L K S D N M++ Y + K
Sbjct: 596 SGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAK 655
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
A N + E G P+ ++ +L H R + LK A
Sbjct: 656 ANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILA 700
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 16/224 (7%)
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
V++T+ K + S+++ +++ G LDVY+Y +++ S G VF+ M+ +
Sbjct: 187 VIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKME-E 245
Query: 276 KAVNPNWTTFSTMATMYIKMGQV-EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
+ P T++ + +Y KMG K + ++S D Y+ L+S E
Sbjct: 246 EGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYE 305
Query: 335 EVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK-----SSYDPRI 389
E + VF + G+ + + D+ G + +E + V S + P I
Sbjct: 306 EAAQ-------VFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSI 358
Query: 390 A--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
N ++S Y ++G +A + ++E+G KP+ ++ TL G
Sbjct: 359 VTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSG 402
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D A++ Y R +M A +++ M + G++ YN +M ++ + + ++ E ++
Sbjct: 636 DLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVL 695
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KG++ D+ SYN + + G + +F MK V P+ T++T Y
Sbjct: 696 KEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLV-PDVITYNTFVASYAA 754
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
E A +R + R++ Y+ ++ Y ++ + + + P VT
Sbjct: 755 DSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSLNQLDPHVT 811
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 128/285 (44%), Gaps = 10/285 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+N + + G+A L++ M KG + Y +++ + K + +E ++
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM KG L+ YN +S+ G + +F M K P+ TF+++ +
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS-SKGCKPDIFTFNSLIFGLCR 499
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+ ++E A R + + V ++ L+ + G+ +E ++ N L+R +
Sbjct: 500 VDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGC--PLDE 557
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFF 410
+ Y+ +I +L + G +E +FEE ++ P I N++++ + G A F
Sbjct: 558 ITYNGLIKALCKTGAVEKGLGLFEEM--IRKGLTPSIITCNILINGFCTAGKVHNALEFM 615
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
+I G P+ ++ +L G + RI EAL+ + AEG +
Sbjct: 616 RDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFE-KLQAEGIQ 659
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 126/291 (43%), Gaps = 46/291 (15%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ + + A L++ +M KG++++++ YN +++ K + E M EM
Sbjct: 420 YTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479
Query: 239 EKGIRLDVYSYN-IWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKM 295
KG + D++++N + C ++ME L + V + V N TF+T+ +++
Sbjct: 480 SKGCKPDIFTFNSLIFGLC----RVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRR 535
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYL---LSLYGSV----GKKEEVYR---------- 338
G++++A + + + R D + Y+ L L G+V G EE+ R
Sbjct: 536 GEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITC 595
Query: 339 ------------VWN--------LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
V N ++R P + Y+++I+ L + G I+ +FE+
Sbjct: 596 NILINGFCTAGKVHNALEFMRDMIHRGFSPDIVT--YNSLINGLCKRGRIQEALNLFEKL 653
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
+ D N ++ W +EG FD A +E G PN +W L
Sbjct: 654 QAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 151/379 (39%), Gaps = 23/379 (6%)
Query: 73 WNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWM 132
+N + L + + P + S +V D G S + V+K L +A + M
Sbjct: 178 YNVVLDVLVVGNCPSVAS-NVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDM 236
Query: 133 NNRGERFRLSASDAAIQ---LDLIAKVHGVASA-----EDFFLSLPDTLKDRRVYGALLN 184
G ++ I +D ++K V A E F + P D + ++
Sbjct: 237 TKHG-----CVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCP---PDVNTFNTVIY 288
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
+ R L+D+M KG+ + + Y +M K DE ++++S++
Sbjct: 289 GFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGP---- 344
Query: 245 DVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
+V +N ++ G E V++ M ++ P+ TFST+ K G A E
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKM-INNGYVPDVFTFSTLVNGLCKKGLFGSALE 403
Query: 304 SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLA 363
+ ++++ + Y L+ + G+ EE + + + +GY+A+IS+L
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
+ G I +F E S D N ++ + + A A + ++ EG NS
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523
Query: 424 SWETLAEGHIRERRILEAL 442
++ TL +R I EAL
Sbjct: 524 TFNTLIHAFLRRGEIQEAL 542
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 128/259 (49%), Gaps = 11/259 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ R YGAL+N + + AE+L+ M+ +G + + +N M+ Y + D+ +
Sbjct: 272 NERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIK 331
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--DKAVNPNWTTFSTMATMY 292
+ M+ GI+LDVY+YN +CG +ME +L+ + + V N+ +++T+ +++
Sbjct: 332 AVMERMGIQLDVYTYNTL--ACG-LCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIH 388
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPG 349
K G + +A R +E + + V Y+ ++ Y GS+ ++ E ++ + + P
Sbjct: 389 SKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSI-REAERFKKEMEKKGLVPD 447
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
V Y A++ G ++ ++FEE + + ++S KEG ++A F
Sbjct: 448 VYT--YAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQF 505
Query: 410 FNSIIEEGGKPNSTSWETL 428
+++++ G P+ T + L
Sbjct: 506 YDNMLAAGLTPDDTLYSML 524
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 121/265 (45%), Gaps = 5/265 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+ Y R + ++ +M G Y +++ + +VES+ E+K
Sbjct: 171 YNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK 230
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
K + DVY Y+ +++ G+ + VF+ V + PN T+ + + K+GQ+
Sbjct: 231 RKNVAGDVYFYSAVINAYCRAGNVRRASEVFDEC-VGNGIEPNERTYGALINGFCKIGQI 289
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
E AE L ++ R G +++ ++ ++ Y G ++ + + + + Y+ +
Sbjct: 290 EAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTL 349
Query: 359 ISSLARIGDIEGMEKIFEEWL--SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
L R+ +E +K+ V+S+Y ++S + KEG+ +A F + +
Sbjct: 350 ACGLCRVNRMEDAKKLLHIMTENGVESNYVSY--TTLISIHSKEGDMVEARRLFRDMEGK 407
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
G +P+ ++ + +G+I+ I EA
Sbjct: 408 GSRPSVVTYNVMIDGYIKSGSIREA 432
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 5/249 (2%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AELL + + L +V++ + K D+ ++ EM G++L+ YN L
Sbjct: 117 AELLRKALASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLD 176
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ Q + ++ V + M+ V P T++ + G + K E ++ +
Sbjct: 177 TYTRQKNDARVAEVLKEME-SGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVA 235
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEGME 372
D Y +++ Y G V++ V G+ Y A+I+ +IG IE E
Sbjct: 236 GDVYFYSAVINAYCRAGNVRRASEVFD--ECVGNGIEPNERTYGALINGFCKIGQIEAAE 293
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ + ++ I N M+ Y + G DKA + G + + ++ TLA G
Sbjct: 294 MLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGL 353
Query: 433 IRERRILEA 441
R R+ +A
Sbjct: 354 CRVNRMEDA 362
>gi|297849786|ref|XP_002892774.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338616|gb|EFH69033.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 883
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 19/274 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
++ +YG L+ A+ R A + + K Y +M+ Y ++ E + ++
Sbjct: 599 EKSMYGKLIGAWCRVNNVRKARQFFEILVTKEIIPDLFTYTIMINTYCRLNELKQAYALF 658
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+MK + ++ DV +Y + L+S +ME F+ V P+ ++ M Y +
Sbjct: 659 QDMKRRDVKPDVVTYTVLLNSNPELDVKREMEA-FD-------VKPDVVLYTIMINRYCQ 710
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+ V+KA + ++ R D V Y LL + E+ + +++ VF
Sbjct: 711 LNDVKKAYALFKDMKRREIVPDVVTYTVLLKNNPELDLTREM-KAFDVKPDVFY------ 763
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNS 412
Y +I +IGD++ + IF++ ++S DP A +++ K GN +A+ F+
Sbjct: 764 YTVLIDWQCKIGDLKEAKGIFDQM--IESGVDPDAAPYTALIAGCCKMGNLKEAKMIFDL 821
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+IE G KP+ S+ TL G R + +A + +K
Sbjct: 822 MIESGLKPDFVSYTTLIAGFRRNGFVRKAFTLMK 855
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 136/351 (38%), Gaps = 55/351 (15%)
Query: 159 VASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
+ AE FL + + D VY A++ + + A + +KM +KG ++ + +
Sbjct: 307 IEDAEKAFLDMEEHGIDPDVYVYSAIIEGHRKTMNIPKAFDIFNKMVEKGKRINCVIGSS 366
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
++ ++ + + E +E I LD YN+ + G G E+ +F M K
Sbjct: 367 ILQCCCQMGNFSGAYDLFEEFRELNIPLDRVCYNVAFDALGKLGKVEEAIELFREM-TGK 425
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
+ P+ ++T+ G+ A + ++ + GS GK ++
Sbjct: 426 GIAPDVINYTTLIGGCCLQGKCSDA------------------FDLMIEMDGS-GKTPDI 466
Query: 337 YRVWNLYRSVFPGVTNLGYHAMISSLARIG-DIEGMEKI-FEEWLSVKSSYDPRIANLMM 394
+ Y+ + LAR G E +E + E VK +Y N+++
Sbjct: 467 ----------------VIYNVLAGGLARNGLSQEALETLKLMEDRGVKPTYVTH--NMVI 508
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGA 454
+ G DKAEAF+ S +E + N S + +G+ CL AF
Sbjct: 509 EGLIVAGKLDKAEAFYES-LEHKSRENDAS---MVKGYCEA-------GCLDQAFERFIR 557
Query: 455 KSW-RPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKD-YMSLIG 503
+ PK V F C E++ + + + + + G EK Y LIG
Sbjct: 558 LEFPLPKSVYFTLFTSLCAEKNHISKAQDLLDRMWELGVEPEKSMYGKLIG 608
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 119/265 (44%), Gaps = 5/265 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ AL++ Y + M +A ++D M+ +S YN ++ + + K D +++++M
Sbjct: 368 FNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMY 427
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E + ++ +YN + + + LM D V P+ TF KMG+V
Sbjct: 428 ENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFV-PDQRTFCAFIDCLCKMGKV 486
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
E+A + ++ + + Y L+ Y K + + ++ L+ FP ++ ++
Sbjct: 487 EQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFP--NSITFN 544
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L + G +E + + + +++ ++E +FD+A F + +I
Sbjct: 545 VLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISS 604
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
G +PN ++ + + R+ R+LEA
Sbjct: 605 GCQPNVVTYTAFIKAYCRQGRLLEA 629
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 126/296 (42%), Gaps = 9/296 (3%)
Query: 153 IAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+V + A + F + + D Y L+ A+ A ++M + G +
Sbjct: 270 FCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPN 329
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
Y V++ + K+ + DE M+S M EKG+ V +N + +G E V +
Sbjct: 330 VYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLD 389
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
MK++K V PN T++ + + + +++A L ++ + V Y+ L+ +
Sbjct: 390 SMKLNK-VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIH---GL 445
Query: 331 GKKEEVYRVWNLYRSVFP-GVT--NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
K V W L+ + G + A I L ++G +E ++FE + +
Sbjct: 446 CKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANE 505
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ ++ Y K F A F ++ EG PNS ++ L +G +E ++ +A+S
Sbjct: 506 FLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMS 561
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 125/290 (43%), Gaps = 24/290 (8%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRR--VYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+D + K+ V A F SL + + +Y AL++ Y +A +A LL +M +G
Sbjct: 477 IDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGC 536
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+S+ +NV++ K + ++ S+V M + + V++Y I + + ++
Sbjct: 537 FPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANM 596
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ M + PN T++ Y + G++ +AEE + +++ D Y L++ Y
Sbjct: 597 FLDQM-ISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAY 655
Query: 328 GSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G +G+ + + V L R G + Y ++ L IFE++
Sbjct: 656 GCIGQLDSAFGV--LIRMFDTGCEPSRQTYSILLKHL-----------IFEKYNKEGMGL 702
Query: 386 DPRIANLMMS----WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
D N+ + W K +F+ F ++E+G PN ++ L +G
Sbjct: 703 DLNSTNISVDNANIW--KIADFEIITMLFEKMVEQGCVPNVNTYSKLIKG 750
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 116/287 (40%), Gaps = 38/287 (13%)
Query: 154 AKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
K+ V A+ +F L D Y +L+ Y + G+A + + M +G +
Sbjct: 201 CKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNE 260
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
+ Y ++ + ++ + DE + +MKE G DV +Y + +++ G + FE
Sbjct: 261 VSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEE 320
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M V+ + PN T++ + + K+G++++ E L + +
Sbjct: 321 M-VENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEK-------------------- 359
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
L SV P ++A+I + G +E + + K + R N
Sbjct: 360 ---------GLVSSVVP------FNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYN 404
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
++ + ++ + D+A A N + E PN ++ TL G + R +
Sbjct: 405 ELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVV 451
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 114/256 (44%), Gaps = 12/256 (4%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A +++ + +++ YN + + + DE+ + +M G+ ++ S+N ++
Sbjct: 139 ARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVN 198
Query: 255 SCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+ G+ + F LMK + T++++ Y K+ ++ A + +
Sbjct: 199 AHCKIGNVVVAKAYFCGLMKFGFCCDS--FTYTSLILGYCKIHELGDAYKVFEIMPQEGC 256
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGM 371
R+ V Y L+ + VGK +E ++ + FP V Y ++++ +G
Sbjct: 257 LRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPT--YTVLVAAFCEVGKETEA 314
Query: 372 EKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
K FEE V++ +P + +++ ++ K G D+ ++++E+G + + L
Sbjct: 315 LKFFEEM--VENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372
Query: 430 EGHIRERRILEALSCL 445
+G+ + R ++E C+
Sbjct: 373 DGYCK-RGMMEDAICV 387
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 121/280 (43%), Gaps = 31/280 (11%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM- 237
Y A + AY R AE ++ K++++G + S Y+V++ Y I + D ++ M
Sbjct: 613 YTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMF 672
Query: 238 -----------------------KEKGIRLDVYSYNIWLSSCG--SQGSTEKMEGVFELM 272
++G+ LD+ S NI + + E + +FE M
Sbjct: 673 DTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKM 732
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV-ESRITGRDRVPYHYLLSLYGSVG 331
V++ PN T+S + K+ + A + ES I+ + + ++ LLS +G
Sbjct: 733 -VEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENI-HNSLLSSCCKLG 790
Query: 332 KKEEVYRVWNLYRSVFPGVTNL-GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
EE R+ + + + +L Y ++ L G+ E E+IF LS +YD +
Sbjct: 791 MHEEALRLLDSMME-YNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVW 849
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+++ V++G D+ + + + G + +S + L++
Sbjct: 850 KVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQ 889
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 19/276 (6%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L R + L M + G + + +N M+ + KI ++ +
Sbjct: 158 YNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLM 217
Query: 239 EKGIRLDVYSY-NIWLSSCGSQ--GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+ G D ++Y ++ L C G K VFE+M + + N +++ + + ++
Sbjct: 218 KFGFCCDSFTYTSLILGYCKIHELGDAYK---VFEIMPQEGCLR-NEVSYTNLIHGFCEV 273
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
G++++A E +++ D Y L++ + VGK+ E + + + + P V
Sbjct: 274 GKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYT- 332
Query: 354 GYHAMISSLARIGDI-EGME---KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
Y +I ++G + EGME + E+ L SS P N ++ Y K G + A
Sbjct: 333 -YTVLIDYFCKVGKMDEGMEMLSTMLEKGLV--SSVVP--FNALIDGYCKRGMMEDAICV 387
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+S+ PNS ++ L G R++ + A++ L
Sbjct: 388 LDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALL 423
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 142/331 (42%), Gaps = 25/331 (7%)
Query: 113 VKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT 172
++EL K +++ A E++ + +G ++ S+A I HG+ +
Sbjct: 429 IQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALI--------HGLCQGNNM-KEATKV 479
Query: 173 LK---------DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
LK DR Y ++ +A A L D M +G+ +N+ + Y
Sbjct: 480 LKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCN 539
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNW 282
+ + +E+ ++ +MK +G++ D+ +Y + C ++ + E + ELMK + PN
Sbjct: 540 LGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMK--NGLRPNA 597
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN- 341
++ + Y + G + A L ++ V Y+ L+ G EEV V+
Sbjct: 598 VIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQ 657
Query: 342 -LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
+ + + GV +GY +I +IG I+ F+E S + +M Y K
Sbjct: 658 CIVKDIELGV--IGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKS 715
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
GN ++A F+ ++ G P+S S+ TL G
Sbjct: 716 GNKEEASKLFDEMVSLGIVPDSVSYNTLISG 746
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 132/327 (40%), Gaps = 7/327 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+G L++ R + G ++ +M+ G + + YN M+ + + E + EM
Sbjct: 284 FGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMV 343
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK-MGQ 297
KGI+ V +YN+ + +G E E + + M + + + + F+++ +++ G+
Sbjct: 344 SKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLL-AGMMVHCSLFNSVVAWHLRGTGR 402
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
++ +R + +R + + GK EE +W GV +A
Sbjct: 403 LDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNA 462
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I L + +++ K+ + ++ D N+M+ K D+A + +I+ G
Sbjct: 463 LIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG 522
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
KP+ ++ + ++ E L L +EG K P V + DM
Sbjct: 523 FKPDLFTFNIFLHTYCNLGKVEEILHLLD-QMKSEGLK---PDIVTYGTIIDGYCKAKDM 578
Query: 478 GSKEAFVALLRQPGYRKEK-DYMSLIG 503
++ L + G R Y +LIG
Sbjct: 579 HKANEYLTELMKNGLRPNAVIYNALIG 605
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 104/235 (44%), Gaps = 12/235 (5%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG +++ Y +A+ A + ++ G +++ YN ++ Y + + ++
Sbjct: 561 DIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGIL 620
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MK GI+ +YN + G E+++ VF V K + ++ + + K
Sbjct: 621 DTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIV-KDIELGVIGYTIIIQGFCK 679
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+G++++A + + SR +++ Y L+ Y G KEE ++++ S+ ++
Sbjct: 680 IGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVS 739
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKS--------SYDPRIANLMMSWYVKEG 401
Y+ +IS +++ ++K+ E + S SY+ + + W KE
Sbjct: 740 YNTLISGFC---EVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEA 791
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 201 KMRD-KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
+MRD K A Y M+ + E D +M++E++ GI+ V +YN+ + +
Sbjct: 200 EMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKS 259
Query: 260 GSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G ++E F L V+ V P+ TF + + + Q + L+ ++ +
Sbjct: 260 G---RVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNE 316
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
V Y+ ++ + G E ++++ S T + Y+ + +L + G++E EKI +E
Sbjct: 317 VIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDE 376
Query: 378 WLSVKSSYDPRIANLMMSWYVK-EGNFDKAEAFFNSIIEEGGKPN 421
L + N +++W+++ G D ++ KPN
Sbjct: 377 MLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPN 421
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 109/256 (42%), Gaps = 8/256 (3%)
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMK-IKEYDEVESMVSEMKEKGIRL-DVYSYNI 251
+AE ++D+M G VH +N ++ +++ D V ++ EM + ++ D
Sbjct: 369 HAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTAC 428
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
C S E E F+++ K + N T + + + +++A + L+ + +
Sbjct: 429 IQELCKSGKHEEAAEIWFQVL--GKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNS 486
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIE 369
DR+ Y+ ++ K +E ++ + + R P + ++ + + +G +E
Sbjct: 487 GVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDL--FTFNIFLHTYCNLGKVE 544
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
+ + ++ S D ++ Y K + KA + +++ G +PN+ + L
Sbjct: 545 EILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALI 604
Query: 430 EGHIRERRILEALSCL 445
G+ R I +A+ L
Sbjct: 605 GGYGRNGNISDAIGIL 620
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 128/274 (46%), Gaps = 13/274 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D YG ++N + RG+ +L L++KM L YN ++ K K D+
Sbjct: 15 DLVTYGVVVNGLCK---RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 71
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ EM+ KGIR +V +Y+ +S + G + M +++ +NP+ TFS +
Sbjct: 72 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDA 130
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPG 349
++K G++ +AE+ + R V Y L++ + + +E +++ S FP
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 350 VTNLGYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
V Y+ +I + + EGME +F E + N+++ + G+ D A+
Sbjct: 191 VVT--YNTLIKGFCKYKRVEEGME-VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 247
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F ++ +G PN ++ TL +G + ++ +A+
Sbjct: 248 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 281
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 149/351 (42%), Gaps = 15/351 (4%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
++LN E+G ++ L K++ AL ++ M +G R +
Sbjct: 37 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR-----PNVVTYSS 91
Query: 152 LIAKVHGVASAEDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
LI+ + D L D ++ D + AL++A+V+ AE L D+M +
Sbjct: 92 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 151
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKM 265
+ Y+ ++ + DE + M M K DV +YN + C + E M
Sbjct: 152 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 211
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E VF M + + N T++ + + G + A+E + + S + + Y+ LL
Sbjct: 212 E-VFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 269
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
GK E+ V+ + T Y+ MI + + G +E +F LS+K
Sbjct: 270 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVK 328
Query: 386 DPRIA-NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+A N M+S + ++G+ ++A+A F + E+G PNS + TL +R+
Sbjct: 329 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 379
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 101/241 (41%), Gaps = 2/241 (0%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F+ D Y L+ + + + + +M +G +++ YN+++ +
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ D + + EM G+ ++ +YN L G EK VFE ++ K + P T+
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTY 299
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ M K G+VE + + + D V Y+ ++S + G KEE ++ +
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ Y+ +I + R GD E ++ +E S + D L+ + + +G DK
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM-LHDGRLDK 418
Query: 406 A 406
+
Sbjct: 419 S 419
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 115/266 (43%), Gaps = 3/266 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL+A + A L+D+MR KG + YNV++ + DE +++S +
Sbjct: 288 TYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNL 347
Query: 238 KEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
G + D +Y L S CGS+ E E + E+ + A P+ TF+T+ T + G
Sbjct: 348 PSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCA--PDEVTFNTIVTSLCQQG 405
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
V++A E + + D V Y +L VG+ ++ + + +S + Y
Sbjct: 406 LVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYT 465
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L E E++ E L D N +++ ++G D+A + E
Sbjct: 466 TVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSEN 525
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G P+ ++ + +G E I +A+
Sbjct: 526 GCSPDIVTYNCIIDGLCNESCIDDAM 551
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/278 (18%), Positives = 116/278 (41%), Gaps = 9/278 (3%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D + ++ + + + A ++++M + G + + YN ++ D+
Sbjct: 491 DCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDA 550
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMK--VDKAVNPNWTTFST 287
++S+++ G + D+ ++N L CG ++ E +LM + P+ TF+T
Sbjct: 551 MELLSDLQSCGCKPDIVTFNTLLKGLCG----VDRWEDAEQLMANMMRSNCPPDELTFNT 606
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+ T + G + +A E+L+ + + Y ++ GK + + + +
Sbjct: 607 VITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGT 666
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P + + Y+ +IS+L + G +E + +S D + +E D+A
Sbjct: 667 PDL--ITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAV 724
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ + G P++T + + G R+RR A+ C
Sbjct: 725 RMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCF 762
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/275 (17%), Positives = 111/275 (40%), Gaps = 5/275 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + ++ + + + A ++D M + G + Y+ ++ + D+ ++
Sbjct: 390 DEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELL 449
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMY 292
S +K G + D +Y L STE+ E ELM + P+ TF+T+
Sbjct: 450 SRLKSYGCKPDTIAYTTVLKG---LCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASL 506
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
+ G V++A + ++ D V Y+ ++ + ++ + + +S
Sbjct: 507 CQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDI 566
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ ++ ++ L + E E++ + D N +++ ++G +A
Sbjct: 567 VTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKI 626
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKG 447
+ E G PNS+++ + + ++ + AL L G
Sbjct: 627 MAENGCVPNSSTYSIVVDALLKAGKAQAALELLSG 661
>gi|357114648|ref|XP_003559110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Brachypodium distachyon]
Length = 875
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 9/256 (3%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y A+L+ Y + RM+ L D+ R G+ + + V+ ++ + +YD ++
Sbjct: 240 VLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQ 299
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EM+E GI+ +++ YN L + G G +FE M + V PN T + +A +
Sbjct: 300 FVFREMREVGIKPNIFVYNALLEALGKTGKPGLARSLFEEMTAE-GVEPNARTLTAVAKI 358
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR----SVF 347
Y + A + ++ + D + + LLS+ VG E +++ + S
Sbjct: 359 YGRARWGRDALQLWEQMRQKKIPADSILCNTLLSMCADVGLVAEAEQLFEEMKDPELSDV 418
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LMMSWYVKEGNFDK 405
P Y AMI+ I D + ++F E L+ +P I + +++ K
Sbjct: 419 PKPDKWSYTAMINIYGSIKDADRALQLFAEMLA--EGIEPNIMSYTIVIQCLGKTNRIQD 476
Query: 406 AEAFFNSIIEEGGKPN 421
A + +E G KP+
Sbjct: 477 AAEVLEAGLERGLKPD 492
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 39/234 (16%)
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+AV ++ +NV + + + E E + +M G+ LD NI
Sbjct: 166 AFAVDTIFFNVALKSLRAARRWAECERLALDMVASGVPLD----NI-------------- 207
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG---RDRVPYHY 322
T+ST+ T + Q KA E R+ S G D V Y
Sbjct: 208 ------------------TYSTLITAARRCRQFAKAVEWFERMYSPGGGGVLPDEVTYSA 249
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+L +Y + KEEV +++ R ++ + + GD +G++ +F E V
Sbjct: 250 VLDVYAQLRMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFREMREVG 309
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ + N ++ K G A + F + EG +PN+ + +A+ + R R
Sbjct: 310 IKPNIFVYNALLEALGKTGKPGLARSLFEEMTAEGVEPNARTLTAVAKIYGRAR 363
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 163/379 (43%), Gaps = 16/379 (4%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
+I N + M G SVL K G L ++K L + K AL +
Sbjct: 94 LITLNILINCFCHMGQITFG-FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFH 152
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYV 187
D + +G F+L+ A ++ + K+ A + L V Y +++A
Sbjct: 153 DKLLAQG--FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALC 210
Query: 188 RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY 247
+ ++ A L +M KG + + Y+ ++ + + E +++EM K I +VY
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY 270
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
+YNI + + +G ++ + V +M + V P+ T+ST+ Y + +V+KA+
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVM-LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSL 362
+ D Y L++ + K + V NL+ +++ PG+ Y ++I L
Sbjct: 330 MSLMGVTPDVHTYTILINGF---CKNKMVDEALNLFKEMHQKNMVPGIVT--YSSLIDGL 384
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
+ G I + + +E D + ++ K G+ D+A A FN + ++ +PN
Sbjct: 385 CKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNI 444
Query: 423 TSWETLAEGHIRERRILEA 441
++ L +G + R+ +A
Sbjct: 445 FTFTILLDGLCKGGRLKDA 463
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 169 LPDTLKDRR------VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
L D ++DR Y +L++ + A L +KM+D+ + + +++
Sbjct: 396 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLC 455
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
K + + + ++ KG L+VY+YN+ ++ QG E+ + M+ D PN
Sbjct: 456 KGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME-DNGCIPNA 514
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESR 311
TF T+ K + +KAE+ LR++ +R
Sbjct: 515 FTFETIIIALFKKDENDKAEKLLRQMIAR 543
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 10/242 (4%)
Query: 210 HSLP---YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
H+ P +N ++ + K+K Y S+ ++ KGI+ D+ + NI ++ G
Sbjct: 55 HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQIT--F 112
Query: 267 GVFELMKVDK-AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
G L K+ K P+ T +T+ GQV+KA ++ ++ ++V Y L++
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 172
Query: 326 LYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+G ++ R P V Y +I +L + + +F E
Sbjct: 173 GVCKIGDTRGAIKLLRKIDGRLTKPNVEM--YSTIIDALCKYQLVSEAYGLFSEMTVKGI 230
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
S D + ++ + EG +A N ++ + PN ++ L + +E ++ EA S
Sbjct: 231 SADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKS 290
Query: 444 CL 445
L
Sbjct: 291 VL 292
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 105/253 (41%), Gaps = 9/253 (3%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
++ K+ +GY ++ N ++ + + ++ +G +L+ SY ++
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175
Query: 258 SQGSTEKMEGVFELM-KVD-KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
G T G +L+ K+D + PN +ST+ K V +A + +
Sbjct: 176 KIGDTR---GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 232
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
D V Y L+ + GK +E + N + +++ P V Y+ ++ +L + G ++ +
Sbjct: 233 DVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYT--YNILVDALCKEGKVKEAKS 290
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
+ L D + +M Y KA+ FN++ G P+ ++ L G
Sbjct: 291 VLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350
Query: 434 RERRILEALSCLK 446
+ + + EAL+ K
Sbjct: 351 KNKMVDEALNLFK 363
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 153/352 (43%), Gaps = 15/352 (4%)
Query: 100 GGRSLTK--WELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ--LDLIAK 155
GG+ L C +V + ++++ +++ D M G S ++AA+ +D + K
Sbjct: 287 GGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELG----FSPTEAAVSGLVDGLRK 342
Query: 156 VHGVASAEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
+ A + + + + + VY AL+N+ + AELL M + +
Sbjct: 343 QGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGIT 402
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
Y++++ + + D S M + GI VY+YN ++ G E +F M
Sbjct: 403 YSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEM- 461
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+K V P TTF+++ + Y K QV+KA + ++ + + L+S S K
Sbjct: 462 TNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKM 521
Query: 334 EEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
E +++ + R + P T + Y+ +I R G I+ ++ E+ D
Sbjct: 522 AEASELFDELVERKIKP--TEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYR 579
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
++S G KA+ F + + ++ K N + L G+ +E R++EALS
Sbjct: 580 PLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALS 631
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 123/282 (43%), Gaps = 17/282 (6%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ AL++ A L D++ ++ + YNV++ Y + + D+ ++ +M
Sbjct: 508 FTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMH 567
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KG+ D Y+Y +S S G K + + + + V N +S + Y + G++
Sbjct: 568 QKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLH-KQNVKLNEMCYSALLHGYCQEGRL 626
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP-GV--TNLGY 355
+A + + R D V + L+ G++ K+ + ++L + + G+ N+ Y
Sbjct: 627 MEALSASCEMIQRGINMDLVCHAVLID--GAL-KQPDRKTFFDLLKDMHDQGLRPDNVIY 683
Query: 356 HAMISSLARIGDIEGMEKIFEEW-LSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNS 412
+MI + ++ G +K FE W L V P + +M+ K G D+A F
Sbjct: 684 TSMIDTYSKEG---SFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKR 740
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL----SCLKGAFA 450
+ PNS ++ + +E + EA+ + LKG A
Sbjct: 741 MQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLA 782
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 13/247 (5%)
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSY-NIWLSSCGSQG 260
M G+ + + YNV++ K E + + KG+ DV +Y + L C Q
Sbjct: 251 MEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQ- 309
Query: 261 STEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
+ E +LM V+ +P S + K G+++ A E + +V +
Sbjct: 310 ---QFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLF 366
Query: 319 PYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
Y+ L++ G + K E +Y +L G+T Y +I S R G ++ F
Sbjct: 367 VYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGIT---YSILIDSFCRSGRLDVAISYF 423
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+ + N +++ K G+ AE+ F + +G +P +T++ +L G+ ++
Sbjct: 424 DRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKD 483
Query: 436 RRILEAL 442
++ +A
Sbjct: 484 LQVQKAF 490
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 114/273 (41%), Gaps = 12/273 (4%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDT Y L++ A+ ID + + ++ + Y+ ++ Y +
Sbjct: 572 VPDT----YTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLM 627
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--DKAVNPNWTTFS 286
E S EM ++GI +D+ + + + Q + F+L+K D+ + P+ ++
Sbjct: 628 EALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTF---FDLLKDMHDQGLRPDNVIYT 684
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
+M Y K G +KA E + + + V Y L++ G+ + ++ ++
Sbjct: 685 SMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAA 744
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDK 405
++ Y + +L + G+++ E I +K + N+++ + K G F +
Sbjct: 745 NVPPNSITYGCFLDNLTKEGNMK--EAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHE 802
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
A + + E G P+ ++ TL + R +
Sbjct: 803 ATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNV 835
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 114/249 (45%), Gaps = 5/249 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ Y M A + +MR+KG A + YN+++ + K++ E +V ++
Sbjct: 266 YNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G+ ++ +YNI ++ G + +F +K ++P T++T+ Y K+ +
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK-SSGLSPTLVTYNTLIAGYSKVENL 384
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYH 356
A + ++ +E R +V Y L+ + + E+ + +L + P V Y
Sbjct: 385 AGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYT--YS 442
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I L G+++ K+F+ + + I N M+ Y KEG+ +A N ++
Sbjct: 443 VLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHS 502
Query: 417 GGKPNSTSW 425
G PN S+
Sbjct: 503 GMVPNVASF 511
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 23/322 (7%)
Query: 137 ERFRLSASDA--AIQLDLIAKVHGVASAEDFFLSLP--DTLKDRRVYGALLNAYVRARMR 192
E F LS + +D K V A++ F + + + Y L+N + + ++
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQ 244
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
+ + M+ G ++ YN +++ Y D+ + +EM+EKGI V +YNI
Sbjct: 245 REGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNIL 304
Query: 253 LSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ C + E ++ V ++ KV ++PN T++ + + +G+++ A +++S
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKV--GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSS 362
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSLARIG 366
V Y+ L++ Y V E + +L R + P + + Y +I + AR+
Sbjct: 363 GLSPTLVTYNTLIAGYSKV---ENLAGALDLVKEMEERCIAP--SKVTYTILIDAFARLN 417
Query: 367 DIEG---MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
E M + E+ V Y + ++ GN +A F S+ E +PNS
Sbjct: 418 YTEKACEMHSLMEKSGLVPDVYTYSV---LIHGLCVHGNMKEASKLFKSLGEMHLQPNSV 474
Query: 424 SWETLAEGHIRERRILEALSCL 445
+ T+ G+ +E AL L
Sbjct: 475 IYNTMIHGYCKEGSSYRALRLL 496
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 114/256 (44%), Gaps = 6/256 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y ++NAYV + A + M +G+ S +N +M L ++ +D+ + +E+
Sbjct: 91 LYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL 150
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K K + LD YS+ I + C G K + +++ + ++PN ++T+ K G
Sbjct: 151 KSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLE-EFGLSPNVVIYTTLIDGCCKYGN 208
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRS-VFPGVTNLGY 355
V A+ +++ + Y L++ + G + E ++++ N+ RS + P Y
Sbjct: 209 VMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA--YAY 266
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +IS G ++ K+F E + N+++ + F +A + + +
Sbjct: 267 NCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326
Query: 416 EGGKPNSTSWETLAEG 431
G PN ++ L G
Sbjct: 327 VGLSPNIVTYNILING 342
>gi|302822123|ref|XP_002992721.1| hypothetical protein SELMODRAFT_135826 [Selaginella moellendorffii]
gi|300139462|gb|EFJ06202.1| hypothetical protein SELMODRAFT_135826 [Selaginella moellendorffii]
Length = 449
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 41/282 (14%)
Query: 178 VYGALLNAYVRARMRGNAE-LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y L A +A + AE L ++ +R + +N +M Y K Y ++E + E
Sbjct: 171 TYNMLTRACAQAGLTDKAEALFLELLRRDDLKPDAYTFNGIMDAYAKKGLYRDMEYKLKE 230
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M E G+R D+ ++N+ + + G G KME ++ + P+ TTF++M Y +
Sbjct: 231 MSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLVNLSGCKPSATTFNSMLASYGQSR 290
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++ K E+ L R++ G D ++ L+S YG
Sbjct: 291 ELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYG---------------------------- 322
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSII 414
R G+++ M K F++ V+S P+++ L ++ Y + G D+AEA F +
Sbjct: 323 -------RAGELDTMRKCFDKM--VRSPVKPQVSTLDVLLRAYAEHGLVDEAEALFINAS 373
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS 456
+ KP +S+ L + + ER+ L+ ++ L G +S
Sbjct: 374 KLDIKPAVSSYLILFKAYGEERQ-LDKMTVLMSKMEQSGVES 414
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/396 (20%), Positives = 152/396 (38%), Gaps = 47/396 (11%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFR---LSASDAAIQLDLIAKVHGVASAEDFFLS 168
+V E+ + + AL ++ W+ R L + A I +D + K + A F
Sbjct: 63 LVDEIGRLNDWALALALFKWLQKNEARLSNRDLEVAHAKI-IDTMGKQGQLRLASWIFSQ 121
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNA-ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
L + + V+ A++ A++R + A + +D +VHS P
Sbjct: 122 LQLSSRTTPVFNAIIMAHLRCKNVARALDSALDHFGHMKTSVHSCP-------------- 167
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTFS 286
+ +YN+ +C G T+K E +F EL++ D + P+ TF+
Sbjct: 168 -----------------SLATYNMLTRACAQAGLTDKAEALFLELLRRDD-LKPDAYTFN 209
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG---KKEEVYRVWNLY 343
+ Y K G E L+ + D V ++ L+ YG G K E Y+
Sbjct: 210 GIMDAYAKKGLYRDMEYKLKEMSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLVNL 269
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
P T +++M++S + ++ ME++ D N +MS Y + G
Sbjct: 270 SGCKPSATT--FNSMLASYGQSRELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYGRAGEL 327
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVN 463
D F+ ++ KP ++ + L + + EA + F +P +
Sbjct: 328 DTMRKCFDKMVRSPVKPQVSTLDVLLRAYAEHGLVDEA----EALFINASKLDIKPAVSS 383
Query: 464 VINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYM 499
+ FKA EE + ++ + Q G ++++
Sbjct: 384 YLILFKAYGEERQLDKMTVLMSKMEQSGVESGQEFL 419
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 130/300 (43%), Gaps = 40/300 (13%)
Query: 179 YGALLNAYVRA-RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ +++N +A RM G A + D+M +G A + YN +++ Y K+ E ++ SEM
Sbjct: 84 FNSMVNGLCKAGRMEG-ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 142
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-----------------------V 274
++G+ DV ++ + + G+ E+ + M+ +
Sbjct: 143 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 202
Query: 275 DKA-----------VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
D A + P+ ++ + Y K+G+++ A E +R +E++ D V Y +
Sbjct: 203 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 262
Query: 324 LSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+S Y VG + +++ L + V P Y ++I L + ++FE L +
Sbjct: 263 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT--YSSLIRGLCEEKRLNDACELFENMLQL 320
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D ++ + KEGN +KA + + +I +G P+ ++ L G + R EA
Sbjct: 321 GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEA 380
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 18/280 (6%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y AL+N Y + A LI +M K + Y+ +++ Y K+ D + +M
Sbjct: 223 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+KG+ D +Y+ + + +FE M + V P+ T++T+ + K G
Sbjct: 283 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM-LQLGVQPDEFTYTTLIDGHCKEGN 341
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV-WNLYRSVFPGVTNLGYH 356
VEKA + + D V Y L++ + +E +R+ + LY P N+ Y
Sbjct: 342 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHE-DPVPDNIKYD 400
Query: 357 AMISSLARI---------------GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
A++ ++ G ++ +K+++ L D + ++++ + + G
Sbjct: 401 ALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGG 460
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N KA +F ++ G PNSTS +L G E ++EA
Sbjct: 461 NVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 500
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 116/280 (41%), Gaps = 37/280 (13%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE------------------ 239
++ MR G A +++ YN ++ + + E D E +VS M+E
Sbjct: 32 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGL 91
Query: 240 ------------------KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
+G+ DV SYN LS G + VF M + + P+
Sbjct: 92 CKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM-TQRGLVPD 150
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
TF+++ K G +E+A + ++ R + V + L+ + G ++
Sbjct: 151 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 210
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
R + + Y+A+I+ ++G ++ ++ E + + D + ++S Y K G
Sbjct: 211 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 270
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N D A ++++G P++ ++ +L G E+R+ +A
Sbjct: 271 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 310
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 99/239 (41%), Gaps = 4/239 (1%)
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
M G A + YN+++ +E +V +M+ G + +YN +++ G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
+ E V LM+ + PN TF++M K G++E A + + D V Y+
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
LLS Y VG E V++ R + P V + ++I + + G++E + +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVT--FTSLIHATCKAGNLEQAVALVAQMR 178
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+ ++ + K+G D A + + G +P+ + L G+ + R+
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 237
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M G+ +VY+YNI + + ++G E+ GV M+ PN T++T+ + + G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR-GAGCAPNAVTYNTLVAAFCRAG 59
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL-GY 355
+++ AE RV +L R NL +
Sbjct: 60 ELDGAE-----------------------------------RVVSLMREEGNAKPNLVTF 84
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
++M++ L + G +EG K+F+E + + D N ++S Y K G ++ A F+ + +
Sbjct: 85 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 144
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
G P+ ++ +L + + +A++
Sbjct: 145 RGLVPDVVTFTSLIHATCKAGNLEQAVA 172
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 148/334 (44%), Gaps = 7/334 (2%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL- 169
+++ L K ++ A V+D + ++ R + + L + + + A + F S+
Sbjct: 39 KLLTMLAKAKQAAEASNVFDCLLE--DKLRPTTAIFTALLTVFTQSNQFKKALEIFESMR 96
Query: 170 --PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
+ D+ Y A++ A + A + D+M +G + YN+++ Y K +
Sbjct: 97 LYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSIVTYNILIHGYGKAGLF 156
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
EVE ++S M+ + D ++N + G +ME +E + + + + P+ T ++
Sbjct: 157 REVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEGL-LRQGLQPDMVTLNS 215
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+ + Y G EK E + ++ R+ Y+ ++ YG G +++ W ++ F
Sbjct: 216 LISAYGTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAGMVDQMEETWKRMKAEF 275
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
+ + +M+S+ R G +EK+ + ++ D + N + + + NF+ E
Sbjct: 276 VKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFDAA-DTAVYNAAIDAFQRAQNFEDME 334
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F + +G P+ ++ L + R RR+ +A
Sbjct: 335 KIFEEMKLKGHAPDDVTYSILIGAYERIRRVDKA 368
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 127/289 (43%), Gaps = 8/289 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
+++M+ G + + YN ++ Y + + + +++EM KG D SY +
Sbjct: 228 FLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLC 287
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+++ + E M D + P+ T++T+ M K G ++A E LR E R D+
Sbjct: 288 QDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDK 347
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
V Y +++ + G+ + + N + + P V Y A+++ L ++G +E +K+
Sbjct: 348 VGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVT--YTAVVNGLCKVGKVEEAKKML 405
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
++ + +++ + GN +A N+ E+ PN+ ++ + G RE
Sbjct: 406 QQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRRE 465
Query: 436 RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFV 484
++ EA ++ K + P PV + K+ E M + F+
Sbjct: 466 GKLSEACDVVREML----TKGFFPTPVEINLLIKSLCLEQKMNEAKKFM 510
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/319 (18%), Positives = 123/319 (38%), Gaps = 20/319 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y L++ + A + + ++G+ V + Y+ ++ + D + +V
Sbjct: 311 DQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIV 370
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM KG DV +Y ++ G E+ + + + M PN +++ + +
Sbjct: 371 NEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQM-YKHGCKPNTVSYTALLNGLCQ 429
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G +A E + E + + Y ++ GK E V L + FP T
Sbjct: 430 HGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFP--TP 487
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ + +I SL + +K EE L+ + + ++ + + N D A + +
Sbjct: 488 VEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDD 547
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA----LSCLKGAFAAEGAKSWRPKPVNVINFF 468
+ P++ ++ + + ++ RI EA + LK K P PV +
Sbjct: 548 MYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLK--------KGLDPTPV---TYR 596
Query: 469 KACEEESDMGSKEAFVALL 487
+ MG E + LL
Sbjct: 597 AVIHQYCKMGRVEELIKLL 615
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/230 (18%), Positives = 97/230 (42%), Gaps = 4/230 (1%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ +++ ++G AV+++ + ++ + + D S++ +M D ++ +
Sbjct: 506 AKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIID 565
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ G +G E+ V+ + + K ++P T+ + Y KMG+VE+ + L ++ SR
Sbjct: 566 ALGKKGRIEE-ATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSR--S 622
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
+ R Y+ ++ + G E +V L + H ++ S G K+
Sbjct: 623 KCRTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKV 682
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG-KPNST 423
D ++ + V EG ++A+ ++ G P+S+
Sbjct: 683 ACRMFDRNLIPDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRGNISPDSS 732
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 5/235 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L YVRA +ID M KG +++ Y ++ Y K D+ +
Sbjct: 355 DSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLF 414
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S MK+ G +VY+YN L+ G + TE + V MK++ PN T++TM + +
Sbjct: 415 SLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCA-PNRATWNTMLAVCSE 473
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVF-PGVTN 352
G+ + LR +++ D+ ++ L+S Y G + + +++ + +S F P VT
Sbjct: 474 EGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTT 533
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
Y+A++++LAR GD + E + ++ + + +L++ Y K GN E
Sbjct: 534 --YNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIE 586
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 114/253 (45%), Gaps = 5/253 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ++L + +A + A ++ +M D S+ YN + Y++ DE +++ M
Sbjct: 323 TYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTM 382
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ + +Y + + G G + +F LMK D PN T++++ M K +
Sbjct: 383 TSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMK-DLGCAPNVYTYNSVLAMLGKKSR 441
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E + L ++ +R ++ +L++ GK V +V ++ ++
Sbjct: 442 TEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNT 501
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIE 415
+IS+ AR G K++ E VKS + P + N +++ + G++ AE+ +
Sbjct: 502 LISAYARCGSEVDSAKMYGEM--VKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRT 559
Query: 416 EGGKPNSTSWETL 428
+G KPN S+ L
Sbjct: 560 KGFKPNENSYSLL 572
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 145/338 (42%), Gaps = 31/338 (9%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
+ V D M ++G AI + +G A ED L L +KD G N
Sbjct: 375 GMAVIDTMTSKG------VMPNAITYTTVIDAYGKAGREDDALRLFSLMKD---LGCAPN 425
Query: 185 AYV----------RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
Y ++R ++L + M+ G A + +N M+ + + +++ V ++
Sbjct: 426 VYTYNSVLAMLGKKSRTEDVIKVLCE-MKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVL 484
Query: 235 SEMKEKGIRLDVYSYNIWLSS---CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
EMK G D ++N +S+ CGS+ + KM G E++K P TT++ +
Sbjct: 485 REMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYG--EMVK--SGFTPCVTTYNALLNA 540
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRS-VFPG 349
+ G + AE ++ + ++ + Y LL Y G + + +V +Y VFP
Sbjct: 541 LARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPS 600
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
L ++ + + + GME+ F++ D + N M+S + + F KA
Sbjct: 601 WILL--RTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREM 658
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKG 447
+ I E G +PN ++ L + ++RE +A LKG
Sbjct: 659 LHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKG 696
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 118/315 (37%), Gaps = 60/315 (19%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ + L++AY R ++ + +M G+ YN ++ + ++ ES++
Sbjct: 495 DKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVI 554
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST------- 287
+M+ KG + + SY++ L G+ + +E V E D V P+W T
Sbjct: 555 QDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKV-EKEIYDGHVFPSWILLRTLVLTNHK 613
Query: 288 ----------------------------MATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
M +M+ + KA E L + +
Sbjct: 614 CRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFT 673
Query: 320 YHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVTNLG-------YHAMISSLARIGDIE 369
Y+ L+ LY G K EEV + G+ N G Y+ +I R G ++
Sbjct: 674 YNCLMDLYVREGECWKAEEVLK----------GIQNSGPEPDVVSYNTVIKGFCRKGLMQ 723
Query: 370 GMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
+ E + P I N +S Y FD+A +IE +P+ +++
Sbjct: 724 EAIGVLSEMTT--KGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKI 781
Query: 428 LAEGHIRERRILEAL 442
L +G+ + + EA+
Sbjct: 782 LVDGYCKAGKYEEAM 796
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 133/329 (40%), Gaps = 16/329 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +V ++ R A L D + + Y++ Y ++ Y + +Y +
Sbjct: 179 DNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLF 238
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQG-STEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+MKE G+ + +YN+ L G G S +++ + + M+ K + + T ST+ +
Sbjct: 239 GKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMR-SKGLELDEFTCSTVISACG 297
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+ G +++A + L ++ V Y+ +L ++G G E + ++
Sbjct: 298 REGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSV 357
Query: 354 GYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFN 411
Y+ + ++ R G + EGM I + ++ K I ++ Y K G D A F+
Sbjct: 358 TYNELAATYVRAGFLDEGMAVI--DTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFS 415
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERR---ILEALSCLKGAFAAEGAKSWRPKPVNVINFF 468
+ + G PN ++ ++ ++ R +++ L +K A +W
Sbjct: 416 LMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWN-------TML 468
Query: 469 KACEEESDMGSKEAFVALLRQPGYRKEKD 497
C EE + ++ G+ +KD
Sbjct: 469 AVCSEEGKHNYVNKVLREMKNCGFEPDKD 497
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 2/210 (0%)
Query: 101 GRSLTKWELCR-VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGV 159
G W L R +V K R + +D + G + L ++ + + K+
Sbjct: 595 GHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSK 654
Query: 160 ASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
A F+ + Y L++ YVR AE ++ +++ G + YN ++
Sbjct: 655 AREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIK 714
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
+ + E ++SEM KGI+ + +YN +LS ++ V M ++
Sbjct: 715 GFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFM-IEHNCR 773
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
P+ T+ + Y K G+ E+A + + +++
Sbjct: 774 PSELTYKILVDGYCKAGKYEEAMDFVSKIK 803
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 141/347 (40%), Gaps = 23/347 (6%)
Query: 89 GSASVLNDWEKGGRSLT---KWELCRVVKEL-RKFRRYKHALEVYDWMNNRGERFRLSAS 144
G A L + R T E C + EL R R +V+D M + + +
Sbjct: 87 GPAEALELFTAAARQPTAVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGT- 145
Query: 145 DAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAY---------VRARMRGNA 195
A V + S P L R G LN Y V++ A
Sbjct: 146 --------FATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEA 197
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
+ M + G + Y+V+M + K ++ D V +++EM+ +G++ +VYSY I +
Sbjct: 198 MEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRV 257
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
G ++ + M+ D P+ T + + + G++ A++ ++++
Sbjct: 258 LGQAARFDEAYQILGKME-DSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKP 316
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
DRV Y LL G G + V +WN + + Y A++ +L ++G ++ +F
Sbjct: 317 DRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVF 376
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
+E S + N ++S ++K FD+A FN + G PN
Sbjct: 377 DEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNG 423
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 19/291 (6%)
Query: 164 DFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
D L++ D +K++ + Y +L++ +++A M A L + M G + + + +
Sbjct: 370 DEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLF 429
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ Y K + + MK KGI DV + N LSS G + VF +K D
Sbjct: 430 INYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELK-DMG 488
Query: 278 VNPNWTTFSTMATMYIKM-GQVEKAEESLRRVESRI-TG--RDRVPYHYLLSLYGSVGKK 333
V+P+ T+ TM IK + KA+E++ + TG D + + L+ GK
Sbjct: 489 VSPDTITY----TMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKG 544
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--N 391
E +++++ + + TN Y+ ++S L R G ++ + + EE S + P + N
Sbjct: 545 NEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEM--THSIHPPNLITYN 602
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ K G + A S+ E+G P+ +S+ T+ G I+E R EA
Sbjct: 603 TVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAF 653
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 109/240 (45%), Gaps = 9/240 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ V+++ A L + +G++ Y ++ +K + + E++ +EM
Sbjct: 845 TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEM 904
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G + + YNI L+ G+TE + +FE M V++ +NP+ +++ + G+
Sbjct: 905 LEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKM-VEQGINPDIKSYTVLIDTLCTAGR 963
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGY 355
+ R++ D + Y+ L+ G + EE ++N + + P + Y
Sbjct: 964 LNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYT--Y 1021
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSI 413
+++I L + G +++EE L + P + N ++ Y G+ D A A ++ +
Sbjct: 1022 NSLILHLGKAGKASEAAQMYEELLI--KGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCV 1079
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 111/253 (43%), Gaps = 6/253 (2%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A L +K + G ++ + YN ++ + D E + +EMK G D ++YN+ L
Sbjct: 757 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 816
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ G E+M V M K + T++T+ + +K ++E+A + + S
Sbjct: 817 AMGKSMRIEEMLRVQAEMH-RKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFS 875
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
Y LL GK + ++N L P T Y+ +++ G+ E +
Sbjct: 876 PTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTI--YNILLNGHRIAGNTENVC 933
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+IFE+ + + D + +++ G + ++F ++E G +P+ + L +G
Sbjct: 934 QIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGL 993
Query: 433 IRERRILEALSCL 445
+ RI EA+ CL
Sbjct: 994 GKSERIEEAV-CL 1005
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 7/253 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+ V + AE L +M+ G YN+++ K +E+ + +EM
Sbjct: 776 YNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMH 835
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG +YN +S S+ + ++ + LM + +P T+ + +K G+
Sbjct: 836 RKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS--EGFSPTPCTYGPLLDGLLKAGK 893
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+ AE + + Y+ LL+ + G E V +++ + + + P + + Y
Sbjct: 894 MVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKS--Y 951
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I +L G + F + L + D I NL++ K ++A FN + +
Sbjct: 952 TVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKK 1011
Query: 416 EGGKPNSTSWETL 428
+G PN ++ +L
Sbjct: 1012 KGIVPNLYTYNSL 1024
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 120/291 (41%), Gaps = 22/291 (7%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K +R + A+++Y N E F + LD + K + AE+ F + +
Sbjct: 849 IISGLVKSKRLEQAIDLY--YNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLE 906
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAE---LLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ +Y LLN + R+ GN E + +KM ++G Y V++
Sbjct: 907 YGCKPNCTIYNILLNGH---RIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGR 963
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
++ S ++ E G+ D+ YN+ + G E+ +F MK K + PN T++
Sbjct: 964 LNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMK-KKGIVPNLYTYN 1022
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGR---DRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
++ + +G+ KA E+ + E + + Y+ L+ Y G + Y Y
Sbjct: 1023 ---SLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAA---Y 1076
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
V GV+ A+IS L I E +F E D NL++
Sbjct: 1077 DCVAVGVSL--KTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLIL 1125
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 114/267 (42%), Gaps = 10/267 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG LL+ ++A +AE L ++M + G + YN+++ + + V + +M
Sbjct: 880 TYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKM 939
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E+GI D+ SY + + + + G F + ++ + P+ ++ + K +
Sbjct: 940 VEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQL-LELGLEPDLIIYNLLIDGLGKSER 998
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+E+A ++ + + Y+ L+ G GK E +++ L + P V Y
Sbjct: 999 IEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNV--FTY 1056
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+A+I + G + + + ++V S + ++S V E + AE F +
Sbjct: 1057 NALIRGYSVSGSTDNAYAAY-DCVAVGVS----LKTALISGLVDENLINIAEGLFAEMKR 1111
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
G P+ ++ + + + RI E L
Sbjct: 1112 RGCGPDQFTYNLILDAIGKSMRIEEML 1138
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +Y L++ ++ A L ++M+ KG + YN ++ K + E M
Sbjct: 982 DLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMY 1041
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KG + +V++YN + GST+ ++ + V ++ + + + +
Sbjct: 1042 EELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLK------TALISGLVD 1095
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
+ AE ++ R G D+ Y+ +L G + EE+ +V
Sbjct: 1096 ENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKV 1140
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 141/335 (42%), Gaps = 37/335 (11%)
Query: 98 EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVH 157
E+GG + ++ V+ K R A++V+D M +GE K
Sbjct: 213 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE----------------VKPE 256
Query: 158 GVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
V +Y AL+ Y A L D+M ++G A+ YN++
Sbjct: 257 AV------------------MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 298
Query: 218 M-TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
+ L+M + + E +V EM KG+ LDV++YNI ++ +G+ +K +FE M +
Sbjct: 299 VHALFMDGRGTEAYE-LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMS-RR 356
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
V T++++ K GQV++ ++ R D V Y+ L++ + + G +
Sbjct: 357 GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 416
Query: 337 YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
+ + ++ Y+ ++ L +G ++ K+ +E D N ++S
Sbjct: 417 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISG 476
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
Y +G+ A N ++ +G P ++ L +G
Sbjct: 477 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 511
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 117/260 (45%), Gaps = 16/260 (6%)
Query: 192 RGNAELLIDKMRD----KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG-IRLDV 246
RG + +D MR+ G A + Y +++ + K+ DE + EM KG ++ +
Sbjct: 198 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 257
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
YN + QG + ++ V++ V T++ + G+ +A E +
Sbjct: 258 VMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 316
Query: 307 RVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISS 361
+ + D Y+ L++ + G+V K E++ N+ R GV T + Y ++I +
Sbjct: 317 EMGGKGLALDVFTYNILINGHCKEGNVKKALEIFE--NMSRR---GVRATVVTYTSLIYA 371
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L++ G ++ +K+F+E + D + N +++ + GN D+A + ++ P+
Sbjct: 372 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 431
Query: 422 STSWETLAEGHIRERRILEA 441
++ TL G R+ EA
Sbjct: 432 DVTYNTLMRGLCLLGRVDEA 451
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA- 301
R + +YN ++ S+G + + M+ + PN T+ T+ + + K+G+V++A
Sbjct: 182 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 241
Query: 302 ---EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPGVTNLGYH 356
+E L + E + + V Y+ L+ Y GK + +YR + R V +T Y+
Sbjct: 242 KVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGV--AMTVATYN 296
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ +L G ++ EE + D N++++ + KEGN KA F ++
Sbjct: 297 LLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRR 356
Query: 417 GGKPNSTSWETL 428
G + ++ +L
Sbjct: 357 GVRATVVTYTSL 368
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 148/334 (44%), Gaps = 25/334 (7%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PDTLK 174
+ K AL +D + +G FRLS I ++ + K+ +A + P+ +
Sbjct: 143 KVKEALRFHDKVLAQG--FRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVV- 199
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+Y +++ + + A L +M KG + + Y+++++ + + + + ++
Sbjct: 200 ---IYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLL 256
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM + I D+Y+Y I + + +G ++ E V +M V VN + +ST+ Y
Sbjct: 257 NEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVM-VKACVNLDVVVYSTLMDGYCL 315
Query: 295 MGQVEKAEESLRRVESRITGRDRVP-YHYLLSLYGSVGKKEEVYRVWNLY-----RSVFP 348
+ +V A +RV +T P H + + K + V NL+ +++ P
Sbjct: 316 VNEVNNA----KRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVP 371
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
Y ++I L + G I + +F+E L D N ++ K G+ D+A A
Sbjct: 372 DTVT--YTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIA 429
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
FN + ++ +PN ++ L +G + R+ AL
Sbjct: 430 LFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNAL 463
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/256 (17%), Positives = 112/256 (43%), Gaps = 5/256 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++A + AE ++ M + + Y+ +M Y + E + + +
Sbjct: 267 DIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVF 326
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M + G+ DV+ Y+I ++ ++ +FE + K + P+ T++++ K
Sbjct: 327 YTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIH-QKNMVPDTVTYTSLIDCLCK 385
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTN 352
G++ + + R D + Y+ L+ G + ++N + ++ P V
Sbjct: 386 SGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYT 445
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ ++ L ++G ++ + F++ L+ + R +M++ KEG D+A A +
Sbjct: 446 --FTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSR 503
Query: 413 IIEEGGKPNSTSWETL 428
+ + G ++ ++E +
Sbjct: 504 MEDNGCISDAVTFEIM 519
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 122/268 (45%), Gaps = 1/268 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++++ + + A L K+ D G L Y ++ + + ++ EV+ ++ EM
Sbjct: 226 IYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEM 285
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K I +VY++N+ + + +G + +G+F LM V + P+ TF+T+ + + G
Sbjct: 286 VNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLM-VKRGQQPDIVTFNTLISGHCLHGN 344
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
V +A + V R D Y L+ Y + +E ++N R + + Y +
Sbjct: 345 VLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSS 404
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I L + G I ++F + + N+++ + K + D F + +G
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKG 464
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCL 445
P ++ L G+ + +RI EA++ L
Sbjct: 465 LTPTVLTYNILINGYCKSKRIREAMNLL 492
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/268 (18%), Positives = 117/268 (43%), Gaps = 42/268 (15%)
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-C--GSQGSTEKMEGV 268
+ +N ++ +K+K S++ +M KG+ +++ +IW++ C G G + G+
Sbjct: 85 IQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGI 144
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
+ + PN T +T+ G+V+KA + V ++ D V Y L++
Sbjct: 145 V----LKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLC 200
Query: 329 SVGKKEEVYR---------------VWNLY-------------RSVFPGVTNLG------ 354
+G+ + ++ ++N+ R ++ + ++G
Sbjct: 201 KIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDIL 260
Query: 355 -YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y ++I R G ++++ E ++ + + N+++ + ++G +A+ FN +
Sbjct: 261 TYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLM 320
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
++ G +P+ ++ TL GH +LEA
Sbjct: 321 VKRGQQPDIVTFNTLISGHCLHGNVLEA 348
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 5/259 (1%)
Query: 184 NAYV-RARMRGNAELLIDKMRD---KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
NA++ R G +L RD G A YN+M+ K + +S+ +MK+
Sbjct: 221 NAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQ 280
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
G+ D+ +YN + G G ++ +FE MK D P+ T++ + + K Q+
Sbjct: 281 MGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMK-DVGCEPDVITYNALINCFCKYEQMP 339
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
KA L +++ + V Y L+ ++ + R V Y ++I
Sbjct: 340 KAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLI 399
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ + G + K+ +E L V+ ++ ++ KEG +AE F ++I+ G
Sbjct: 400 DANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVT 459
Query: 420 PNSTSWETLAEGHIRERRI 438
PN ++ L GHI+ +R+
Sbjct: 460 PNLKTYTALVHGHIKNKRV 478
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 124/276 (44%), Gaps = 9/276 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L++ Y + + + L ++M+D G + YN ++ + K ++ + +
Sbjct: 286 DIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFL 345
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
EMK G++ +V +Y+ + + C + ++ + ++ +V ++PN T++++
Sbjct: 346 HEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRV--GLSPNEFTYTSLIDANC 403
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-PGVT- 351
K G + A + + G + V Y LL + K+ + +L+R++ GVT
Sbjct: 404 KAGYLSDALKLADEMLQVQVGFNVVTYTTLLD---GLCKEGRMMEAEDLFRAMIKAGVTP 460
Query: 352 NL-GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
NL Y A++ + +E ++ +E K D + ++ + ++ E
Sbjct: 461 NLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVM 520
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ + G + NS + + + + + +EAL+ L+
Sbjct: 521 SEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQ 556
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPD---TLKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
+ +D + K V A D+F + D + V AL++ + A+ L D+M+
Sbjct: 571 CVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQ 630
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN--IWLSSCGSQGS 261
DK + Y ++ +K K++ E ++ S M E G+ LD+++Y +W SQG+
Sbjct: 631 DKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGL---SQGN 687
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
+ +F + K + P+ + Y ++G +++A E
Sbjct: 688 LVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIE 729
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 124/290 (42%), Gaps = 34/290 (11%)
Query: 150 LDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
LD + K + AED F ++ + + Y AL++ +++ + NA L+ ++++K
Sbjct: 434 LDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKI 493
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
L Y ++ + +E E ++SEMK GIR + Y I + + G T +
Sbjct: 494 KPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALN 553
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ + M D V TF + K G VE+A + R+ + V +L
Sbjct: 554 LLQEM-CDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVA--VCTALI 610
Query: 328 GSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ K + L+ +++ P + Y A+I G+++ K F+E L+++
Sbjct: 611 DGLCKNNYIEAAKKLFDEMQDKNMVP--DKIAYTALID-----GNLK--HKDFQEALNIR 661
Query: 383 SSYDPRIANLMMS----------WYVKEGNF-DKAEAFFNSIIEEGGKPN 421
S R++ L M W + +GN +A F N +I +G P+
Sbjct: 662 S----RMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPD 707
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 132/292 (45%), Gaps = 7/292 (2%)
Query: 162 AEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
A F +P+ + + Y +++ +++ + L +M G + + YNV+++
Sbjct: 207 AVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLS 266
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
+ E +++ EM + + D ++Y+I G ++ M +FE V K V
Sbjct: 267 GLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFE-ESVKKGVK 325
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
T S + K G++ KAEE L+ + + + V Y+ L++ Y +G E + +
Sbjct: 326 IGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSI 385
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWY 397
+ +S ++ Y+A+I+ L ++ I + E K+ +P + N ++ Y
Sbjct: 386 FQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEM--EKNGVNPSVETFNTLIDAY 443
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAF 449
+ G +K + + E+G KPN S+ ++ + +ILEA++ L F
Sbjct: 444 GRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMF 495
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 131/297 (44%), Gaps = 15/297 (5%)
Query: 140 RLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAEL 197
++ A +I L+ + K ++ AE+ +L ++ L+ +Y L+N Y + A
Sbjct: 325 KIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFS 384
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
+ +M+ + + YN ++ K++ E +V EM++ G+ V ++N + + G
Sbjct: 385 IFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYG 444
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G EK + M+ +K + PN ++ ++ + K G++ +A L + +D
Sbjct: 445 RAGQLEKCFIILSDMQ-EKGLKPNVVSYGSIVNAFCKNGKILEAVAIL----DDMFIKDV 499
Query: 318 VP----YHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGM 371
+P Y+ ++ Y G ++ + + +S V P + Y+ +I L + I
Sbjct: 500 LPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVT--YNLLIKGLCKQSQISEA 557
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
E++ + + + D N ++S N D+A + + G KP+ ++ L
Sbjct: 558 EELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRML 614
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/304 (18%), Positives = 126/304 (41%), Gaps = 46/304 (15%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL+ RA G ++D+M + Y+++ + + + + S+ E
Sbjct: 260 TYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEES 319
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+KG+++ Y+ +I L+ G K E V + + V+ + ++T+ Y ++G
Sbjct: 320 VKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTL-VNSGLLQTTVIYNTLINGYCQIGD 378
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTN 352
+E A ++++SR+ D + Y+ L++ +GK E + +L V P V
Sbjct: 379 LEGAFSIFQQMKSRLIRPDHITYNALIN---GLGKVERITEAHDLVIEMEKNGVNPSVET 435
Query: 353 LGYHAMISSLARIGDIE------------GMEKIFEEWLSVKSSY--------------- 385
++ +I + R G +E G++ + S+ +++
Sbjct: 436 --FNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDD 493
Query: 386 --------DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
++ N ++ Y++ G+ D+A + G P+ ++ L +G ++ +
Sbjct: 494 MFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQ 553
Query: 438 ILEA 441
I EA
Sbjct: 554 ISEA 557
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 39/187 (20%)
Query: 156 VHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
+ VA +D F+ D L +VY A+++AY+ A +L +KM+ G + YN
Sbjct: 485 LEAVAILDDMFIK--DVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYN 542
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC------------------- 256
+++ K + E E ++ ++ G+ DV SYN +S+C
Sbjct: 543 LLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKC 602
Query: 257 ----------------GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G G +ME +++ M +DK V P ++ M Y K G+ E
Sbjct: 603 GIKPSPRTYRMLFSSLGGAGRVHEMENLYQQM-LDKDVVPCSGIYNIMVDAYAKCGE-ES 660
Query: 301 AEESLRR 307
E+LR+
Sbjct: 661 KVEALRK 667
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 118/270 (43%), Gaps = 9/270 (3%)
Query: 153 IAKVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ KV + A D + + + V + L++AY RA +++ M++KG +
Sbjct: 408 LGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPN 467
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
+ Y ++ + K + E +++ +M K + YN + + GST++ + E
Sbjct: 468 VVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAE 527
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
MK V P+ T++ + K Q+ +AEE L + + D + Y+ L+S +
Sbjct: 528 KMK-SSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLIS---AC 583
Query: 331 GKKEEVYRVWNLYRSVFP-GV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
+ R L + ++ G+ + Y + SSL G + ME ++++ L
Sbjct: 584 CYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCS 643
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
I N+M+ Y K G K EA + ++G
Sbjct: 644 GIYNIMVDAYAKCGEESKVEALRKEMSDKG 673
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 125/285 (43%), Gaps = 9/285 (3%)
Query: 162 AEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AED + D D + L++ + + + L+++M + G + Y ++
Sbjct: 337 AEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVIN 396
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAV 278
+ K DE ++ M G + + SY I L C ++ + E + +++ +
Sbjct: 397 GFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQ--QGC 454
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
PN TF+T+ K G VE+A E L+++ D + Y ++ G GK EE
Sbjct: 455 LPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 514
Query: 339 VWNLYRSVFPGVT--NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
+ N+ + G+T + Y +M S+L+R G + + ++F+ D + N ++S
Sbjct: 515 LLNVM--INKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISS 572
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
K D+A FF ++ G PN +++ L G E + EA
Sbjct: 573 LCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREA 617
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 128/296 (43%), Gaps = 16/296 (5%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+ K+ G + YN ++ K +D+VE ++ EM G +V ++N ++
Sbjct: 200 LLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLC 259
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G E++ M + P+ ++T+ K G E A + L R+ S +
Sbjct: 260 RNGLFEQVHEALSQMP-EHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNV 318
Query: 318 VPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
V Y+ +L S + EE + +++ P + ++ ++ ++ + G ++ + ++ E
Sbjct: 319 VCYNTVLKGLCSAERWEEAEDLLAEMFQEDCP-LDDVTFNILVDFFCQNGLVDRVIELLE 377
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ L D +++ + KEG D+A ++ G KPN+ S+ + +G R
Sbjct: 378 QMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAE 437
Query: 437 RILEALSCLKGAFAAEGAKSWRPKPV---NVINFFKACEEESDMGSKEAFVALLRQ 489
R ++A + + P PV +INF C++ G E + LL+Q
Sbjct: 438 RWVDAQELISHMI----QQGCLPNPVTFNTLINFM--CKK----GLVEQAIELLKQ 483
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/267 (18%), Positives = 120/267 (44%), Gaps = 9/267 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R+Y +++ + A ++ +M G + + YN ++ + ++E E ++
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM ++ LD ++NI + G +++ + E M ++ P+ T++T+ + K
Sbjct: 342 AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LEHGCIPDVITYTTVINGFCK 400
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS----VGKKEEVYRVWNLYRSVFPGV 350
G V++A L+ + + + + Y +L V +E + + + + P
Sbjct: 401 EGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM--IQQGCLP-- 456
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ ++ +I+ + + G +E ++ ++ L S D + ++ K G ++A
Sbjct: 457 NPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 516
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERR 437
N +I +G PN+ + ++A RE R
Sbjct: 517 NVMINKGITPNTIIYSSMASALSREGR 543
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 137/296 (46%), Gaps = 17/296 (5%)
Query: 156 VHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
+H S D S+ D D Y L++ R R + ++ M G +++ YN
Sbjct: 178 LHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYN 237
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEK-GIRLDVYSYNIWLSSCGSQGSTEKME---GVFEL 271
++ + K K ++++ES++ EM E D+ ++N ++ + G+ EKME F+L
Sbjct: 238 TIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQL 297
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M + P+ T+++M + Y K G +K + L +E R V + ++ +G G
Sbjct: 298 M----GIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAG 353
Query: 332 KKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
EE+ + + F G+ ++ Y +++++ + GD+E ++ I + + D +
Sbjct: 354 NIEEMEEYFKNMK--FQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPL 411
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL-----AEGHIRERRILE 440
N +++ Y + GN K F + E P+ ++ T+ A+G + + LE
Sbjct: 412 FNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDAQRLE 467
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 118/254 (46%), Gaps = 5/254 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMR---DKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
VY AL++AY ++ + A +D+M+ D VH+ Y++++ +++ +D ++ ++
Sbjct: 164 VYTALVSAYGQSGLLHKAISTVDEMKSISDCKPDVHT--YSILIDCCTRLRRFDLLKKIL 221
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M GI + +YN ++ G E+ME + M + P+ TF+T Y
Sbjct: 222 ADMSCLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGN 281
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
Q+EK E+ + + D Y+ ++S YG G +++ V N F T +
Sbjct: 282 SEQIEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVT 341
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
+ +I S R G+IE ME+ F+ + +++ Y K G+ +K ++ I
Sbjct: 342 MNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIE 401
Query: 415 EEGGKPNSTSWETL 428
P++ + L
Sbjct: 402 NSDVVPDTPLFNCL 415
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 136/337 (40%), Gaps = 64/337 (18%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + A++ AY RA ++ +R+ G+ + Y ++ +Y+K E S+
Sbjct: 289 DSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVF 348
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S M++ G+ Y + +C G E VF M+ V P+ T TM ++
Sbjct: 349 SAMRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDMQ-SAGVVPSLETSCTMINVHGL 407
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR---SVFPGVT 351
G V++AEE R + S ++ D + Y+ ++++Y G EE +R++ L + P
Sbjct: 408 KGDVKQAEELFRSLRSSVSKLDIIAYNVIINVYMRYGMHEEAFRIYKLMEEEDGLLP--D 465
Query: 352 NLGYHAM-----------------------------------ISSLARIGDIEGMEKIFE 376
+ YH+M +++ AR +E + KIF+
Sbjct: 466 SYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNCVLNTCARFLPLEEVHKIFQ 525
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKA--------------EAFFNSIIEEGGKPN- 421
E + V + N+M+ Y K G D+A + F+++I GK
Sbjct: 526 EMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQLGVADKITFSTLINSYGKKQD 585
Query: 422 -----STSWETLAEGHIRERRILEALSCLKGAFAAEG 453
+T WE GH LEA +C+ A+ G
Sbjct: 586 FRNMEATLWEMQNAGHGGS---LEAYNCVLDAYGKAG 619
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D+ + L+N+Y + + N E + +M++ G+ YN ++ Y K D++E
Sbjct: 567 VADKITFSTLINSYGKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLED 626
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+++ M++ G+++D+ SYNI ++ G +ME +F M+ + + W T++TM Y
Sbjct: 627 VIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRW-TYNTMIRTY 685
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+KA ++ + ++ DRV Y L++ + G E R W+L+ +
Sbjct: 686 GYADYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAGNLLEAAR-WSLWMT 737
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 119/286 (41%), Gaps = 5/286 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+ + +A A M +KG L Y++MM LY K + ++ E
Sbjct: 45 DDYTFNTLIMSASKADYADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAF 104
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S M + GI++ V +Y+ ++ G EK E + E M K + P+ + Y +
Sbjct: 105 SHMLQSGIQV-VAAYSAMIAIYTRCGFFEKAEKIMEDMWNHK-IAPDRDNWLKQMNTYGQ 162
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G++E+AE + +E V Y+ +++ YG G E+ R++ + +
Sbjct: 163 QGKIEEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVT 222
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y MI + R G + F+ + N ++S Y K N +
Sbjct: 223 YSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMK 282
Query: 415 EEGGKPNSTSWETLAEGHIR---ERRILEALSCLKGAFAAEGAKSW 457
G P+S + + + + R +++++ LS L+ A E +S+
Sbjct: 283 NFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTESY 328
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 106/234 (45%), Gaps = 12/234 (5%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN+M + +++ ++ ++ +M G D Y++N + S + F++M
Sbjct: 14 YNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYADYATRAFQMM- 72
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR-VESRITGRDRVPYHYLLSLYGSVGK 332
++K V P T+S M +Y K G+VE AE + ++S I + Y ++++Y G
Sbjct: 73 LEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGI--QVVAAYSAMIAIYTRCGF 130
Query: 333 KEEVYRV----WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
E+ ++ WN + P N + +++ + G IE E I + +
Sbjct: 131 FEKAEKIMEDMWN--HKIAPDRDN--WLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGVV 186
Query: 389 IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
N M++ Y K G ++KA F + E G +P+ ++ + R ++ +AL
Sbjct: 187 GYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDAL 240
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 128/300 (42%), Gaps = 10/300 (3%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
R Y ++ Y + +AE+ M G V + Y+ M+ +Y + +++ E ++
Sbjct: 81 RLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVA-AYSAMIAIYTRCGFFEKAEKIME 139
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+M I D ++ +++ G QG E+ E + + M+ ++ +++M T Y K
Sbjct: 140 DMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTME-RLGMHLGVVGYNSMITAYGKA 198
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNL 353
G EKA +++ D V Y ++ G GK + + + + P +N
Sbjct: 199 GLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSN- 257
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
++ +IS + ++ G+ ++ + + + D + + ++ Y + G K + +
Sbjct: 258 -FNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLL 316
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
E G ++ S+ TL +++ EALS F+A PK + AC++
Sbjct: 317 REAGWVEDTESYGTLLHVYLKCNLQKEALS----VFSAMRKAGMAPKEYMCRSLICACKD 372
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 104/269 (38%), Gaps = 2/269 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y ++L + ++ AE + ++R+ + + N ++ + +EV
Sbjct: 463 LPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNCVLNTCARFLPLEEVHK 522
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM + G + ++N+ + G G ++ +L + + TFST+ Y
Sbjct: 523 IFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQLGVADK--ITFSTLINSY 580
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K E +L +++ G Y+ +L YG G +++ V +
Sbjct: 581 GKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIARMEKSGLQMDL 640
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I+ R I ME +F + D N M+ Y DKA F
Sbjct: 641 ASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIRTYGYADYPDKAVDTFKM 700
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ + G P+ ++ L + +LEA
Sbjct: 701 MQDSGIMPDRVTYVMLVAAFEKAGNLLEA 729
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 150 LDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
L + K + AE+ + L D D + +LN R + +M D G
Sbjct: 473 LRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNCVLNTCARFLPLEEVHKIFQEMIDVGC 532
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+++ +NVM+ LY K D ++ G+ D +++ ++S G + ME
Sbjct: 533 IPNTITFNVMIDLYGKSGMLDRARDASKLAQQLGVA-DKITFSTLINSYGKKQDFRNMEA 591
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
M+ + + ++ + Y K G ++K E+ + R+E D Y+ L+++Y
Sbjct: 592 TLWEMQ-NAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIARMEKSGLQMDLASYNILINIY 650
Query: 328 GSVGKKEEV 336
G K E+
Sbjct: 651 GRHTKIAEM 659
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 151/346 (43%), Gaps = 7/346 (2%)
Query: 103 SLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASA 162
+LT + + ++ L K + AL+V D M G + + I +D + K + A
Sbjct: 411 NLTTYNI--LIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVN--IMIDRLCKAQKLDEA 466
Query: 163 EDFFLSLPDTL--KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTL 220
FL L + D R + +L++ R +A L +KM D + + Y ++
Sbjct: 467 CSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQN 526
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
+ K ++ + EM +G D+ N ++ G EK +FE +K V P
Sbjct: 527 FFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLV-P 585
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
+ ++S + +K G + + ++ + D + Y+ ++ + GK ++ Y++
Sbjct: 586 DVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLL 645
Query: 341 NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
++ T + Y +++ LA+I ++ +FEE S+ + I + ++ + K
Sbjct: 646 EEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKV 705
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G D+A ++++G PNS +W L + ++ I EA C +
Sbjct: 706 GRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQ 751
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 126/266 (47%), Gaps = 9/266 (3%)
Query: 182 LLNAYVRARMRGN----AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
LLN+Y+ + L ++++ +G Y++++ +K E + EM
Sbjct: 554 LLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM 613
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KE+G+ LDV +YN + G +K + E MK K + P T+ ++ K+ +
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKT-KGLQPTVVTYGSVVDGLAKIDR 672
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY-- 355
+++A +S + V Y L+ +G VG+ +E Y + L + G+T Y
Sbjct: 673 LDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLI--LEELMQKGLTPNSYTW 730
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ ++ +L + +I+ + F+ ++K S + ++M++ F+KA F+ + +
Sbjct: 731 NCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQK 790
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
+G KPN+ ++ T+ G + ++EA
Sbjct: 791 QGLKPNNITYTTMIAGLAKAGNVMEA 816
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 138/353 (39%), Gaps = 45/353 (12%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRV 178
R AL + D M + L + I D KV V A FF + + D
Sbjct: 253 RIDAALSLLDEMKSNSFTADLVLYNVCI--DCFGKVGKVDMAWKFFHEMKAQGLVPDDVT 310
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+ +AR A L +++ YN M+ Y ++DE S++ K
Sbjct: 311 YTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQK 370
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
KG V +YN L+ G +G E+ + + M+ D A PN TT++ + M K G++
Sbjct: 371 RKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA--PNLTTYNILIDMLCKAGEL 428
Query: 299 E---KAEESLRR--------------------------------VESRITGRDRVPYHYL 323
E K +++++ ++ ++ D + L
Sbjct: 429 EAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSL 488
Query: 324 LSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+ G G+ ++ Y ++ L P V + Y ++I + + G E KI++E +
Sbjct: 489 IDGLGRRGRVDDAYSLYEKMLDSDQIPNV--VVYTSLIQNFFKCGRKEDGHKIYKEMVHR 546
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
S D + N M K G +K A F I +G P+ S+ L G ++
Sbjct: 547 GCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVK 599
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 167/390 (42%), Gaps = 18/390 (4%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L + G L+ +V K + K A V + M R +FR + S +
Sbjct: 155 ILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMM--RKFKFRPAFSAYTTLIGA 212
Query: 153 IAKVHGVASAEDFFLSLPDTLK------DRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
++ A+ D L+L ++ + ++ L+ + R A L+D+M+
Sbjct: 213 LS----AANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNS 268
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKM 265
+ + YNV + + K+ + D EMK +G+ D +Y + C ++ E +
Sbjct: 269 FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAV 328
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E +FE + ++++V P ++TM Y G+ ++A L R + + + Y+ +L+
Sbjct: 329 E-LFEELDLNRSV-PCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILT 386
Query: 326 LYGSVGKKEEVYRVWNLYR-SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
G GK EE R+ + R P +T Y+ +I L + G++E K+ +
Sbjct: 387 CLGRKGKVEEALRIHDEMRQDAAPNLTT--YNILIDMLCKAGELEAALKVQDTMKEAGLF 444
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
+ N+M+ K D+A + F + + P+S ++ +L +G R R+ +A S
Sbjct: 445 PNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSL 504
Query: 445 LKGAFAAEGAKSWRPKPVNVINFFKACEEE 474
+ ++ + + NFFK +E
Sbjct: 505 YEKMLDSDQIPNVVVYTSLIQNFFKCGRKE 534
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 124/272 (45%), Gaps = 1/272 (0%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D + + VY +L+ + + + + + +M +G + + N M K E ++
Sbjct: 512 DQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKG 571
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++ E+K +G+ DV SY+I + G + + +F MK ++ ++ + ++T+
Sbjct: 572 RALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK-EQGLHLDVLAYNTVID 630
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
+ K G+V+KA + L ++++ V Y ++ + + +E Y ++ +S+ +
Sbjct: 631 GFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDL 690
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y ++I ++G I+ I EE + + + N ++ VK D+A+ F
Sbjct: 691 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCF 750
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ PN+ ++ + G R+ +A
Sbjct: 751 QNMKNLKCSPNAMTYSIMINGLCMIRKFNKAF 782
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 1/163 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +L++ + + A L+++++ KG +S +N ++ +K +E DE + M
Sbjct: 694 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNM 753
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K + +Y+I ++ K ++ M+ + + PN T++TM K G
Sbjct: 754 KNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQ-KQGLKPNNITYTTMIAGLAKAGN 812
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
V +A R ++ D Y+ ++ S K + Y V+
Sbjct: 813 VMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVF 855
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 147/326 (45%), Gaps = 6/326 (1%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK---DRRVY 179
K A V + M +G + + + I D + K+ + A FL L + + Y
Sbjct: 268 KQAFHVLEEMVGKGLKPNVYTHTSLI--DGLCKIGWMERAFRLFLKLVKSSSYKPNVHTY 325
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
++ Y + AE+L+ +M ++G A ++ Y ++ + K +D ++++MK
Sbjct: 326 TVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKL 385
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+G ++Y+YN + +G ++ V M + ++ + T++ + T + K G +
Sbjct: 386 EGFLPNIYTYNAIIGGFCKKGKIQEAYKVLR-MATSQGLHLDKVTYTILITEHCKQGHIT 444
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
A + +++ + D Y ++++Y + E+ ++++ S+ T Y +MI
Sbjct: 445 CALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMI 504
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ R+G + K+FE + D ++S KE ++A A F +++++
Sbjct: 505 AGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLV 564
Query: 420 PNSTSWETLAEGHIRERRILEALSCL 445
P + TLA + R +I A+S L
Sbjct: 565 PCDVTRVTLAYEYCRRDKITIAVSFL 590
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 105/274 (38%), Gaps = 35/274 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R + AL+ R A+ L+ M +G+ + S V++ + + + V +
Sbjct: 180 DHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLF 239
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M E G ++ +Y+ W+ +G ++ V E M V K + PN T +++ K
Sbjct: 240 RRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEM-VGKGLKPNVYTHTSLIDGLCK 298
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+G +E+A + L L S K V+
Sbjct: 299 IGWMERA------------------FRLFLKLVKSSSYKPNVHT---------------- 324
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y MI + G + E + + + + ++ + K G+FD+A N +
Sbjct: 325 YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMK 384
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGA 448
EG PN ++ + G ++ +I EA L+ A
Sbjct: 385 LEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMA 418
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 128/274 (46%), Gaps = 13/274 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D YG ++N + RG+ +L L++KM L YN ++ K K D+
Sbjct: 220 DLVTYGVVVNGLCK---RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ EM+ KGIR +V +Y+ +S + G + M +++ +NP+ TFS +
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDA 335
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPG 349
++K G++ +AE+ + R V Y L++ + + +E +++ S FP
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 350 VTNLGYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
V Y+ +I + + EGME +F E + N+++ + G+ D A+
Sbjct: 396 VVT--YNTLIKGFCKYKRVEEGME-VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F ++ +G PN ++ TL +G + ++ +A+
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 126/270 (46%), Gaps = 9/270 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+LLN Y ++ A L+D+M GY +++ +N ++ + E +++ M K
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G + D+ +Y + ++ +G T+ + M+ K + P ++T+ K ++
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDD 274
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAM 358
A + +E++ + V Y L+S + G+ + R+ + + R + P V + A+
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV--FTFSAL 332
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEE 416
I + + G + EK+++E VK S DP I +++ + D+A+ F ++ +
Sbjct: 333 IDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLK 446
P+ ++ TL +G + +R+ E + +
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 149/351 (42%), Gaps = 15/351 (4%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
++LN E+G ++ L K++ AL ++ M +G R +
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR-----PNVVTYSS 296
Query: 152 LIAKVHGVASAEDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
LI+ + D L D ++ D + AL++A+V+ AE L D+M +
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKM 265
+ Y+ ++ + DE + M M K DV +YN + C + E M
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E VF M + + N T++ + + G + A+E + + S + + Y+ LL
Sbjct: 417 E-VFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
GK E+ V+ + T Y+ MI + + G +E +F LS+K
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVK 533
Query: 386 DPRIA-NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+A N M+S + ++G+ ++A+A F + E+G PNS + TL +R+
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 101/241 (41%), Gaps = 2/241 (0%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F+ D Y L+ + + + + +M +G +++ YN+++ +
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ D + + EM G+ ++ +YN L G EK VFE ++ K + P T+
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTY 504
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ M K G+VE + + + D V Y+ ++S + G KEE ++ +
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ Y+ +I + R GD E ++ +E S + D L+ + + +G DK
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM-LHDGRLDK 623
Query: 406 A 406
+
Sbjct: 624 S 624
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 148/337 (43%), Gaps = 13/337 (3%)
Query: 109 LCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ--LDLIAKVHGVASAEDFF 166
+ +V++ L K R+++ A+E + R ++F ++ AA+ +D + K V A
Sbjct: 197 MAKVIRRLAKARKHEDAIEAF----RRMDKFGVNKDTAALNVLIDALVKGDSVEHAHKVV 252
Query: 167 LSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
L + + L++ + RAR NA ++ M++ G+ Y + Y +
Sbjct: 253 LEFKGLIPLSSHSFNVLMHGWCRARKFDNARKAMEDMKELGFEPDVFSYTSFIEAYCHER 312
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++ +V+ ++ EM+E G + +Y + G G K V+E MK D V + +
Sbjct: 313 DFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKCDGCVA-DTPVY 371
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR- 344
S M + K G+++ A + + + RD V Y+ ++S + ++E R+
Sbjct: 372 SCMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNTMISTACAHSREETALRLLKEMED 431
Query: 345 -SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
S P V YH ++ + ++ ++ + + S D +L+++ K G
Sbjct: 432 GSCKPNVGT--YHPLLKMCCKKKRMKVLKFLLDHMFKNDISPDLATYSLLVNALCKTGKV 489
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
A +F ++ +G P ++ + LA G + +LE
Sbjct: 490 ADAYSFLEEMVLKGFTPKPSTLKGLA-GELESLSMLE 525
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 6/284 (2%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D + L++ + + + L+++M G + Y ++ + K DE
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++ M G + + SY I L S G E + M + + PN TF+T+
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM-IQQGCPPNPVTFNTLIN 469
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
K G VE+A E L+++ D + Y ++ G GK EE + N+ +
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y ++ +L+R G + + ++F+ D + N ++S K D+A FF
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFF 589
Query: 411 NSIIEEGGKPNSTSWETL-----AEGHIRERRILEALSCLKGAF 449
++ G PN +++ L +EG +E + L + C +GA
Sbjct: 590 AYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 118/264 (44%), Gaps = 1/264 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R+Y +++ + A ++++M G + + YN ++ + + E E ++
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM +K LD ++NI + G +++ + E M + P+ T++T+ + K
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LSHGCMPDVITYTTVINGFCK 403
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G +++A L+ + S + V Y +L S G+ + + + +
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +I+ L + G +E ++ ++ L S D + ++ K G ++A N ++
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
+G PN+ + ++A RE R+
Sbjct: 524 NKGISPNTIIYSSIACALSREGRV 547
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 4/279 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +L A R+ N+ +++ M KG + + N+++ + DE ++ ++
Sbjct: 148 MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL 207
Query: 238 KEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
G D+ SYN L C ++ + E + E+++VD A PN TF+T+ + G
Sbjct: 208 AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA--PNIVTFNTLIGYLCRNG 265
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
E+ E L ++ D Y ++ G E + N S + Y+
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L + E++ E D N+++ ++ + G D+ ++
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
G P+ ++ T+ G +E I EA+ LK + ++ G K
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLK-SMSSCGCK 423
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 134/329 (40%), Gaps = 9/329 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRVY 179
+++++ V + M+ +G L + + L+ I + V A L+ D Y
Sbjct: 162 FRNSVRVLEAMHAKG--CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSY 219
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
A+L A+ G+ E L+D+M A + + +N ++ + ++ V ++++M E
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
G D+ Y + +G E + M + PN ++T+ + +
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMP-SYGLKPNVVCYNTVLKGLCSAERWK 338
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
+AEE L + + D V ++ L+ + G + V + L P V + Y
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV--ITYTT 396
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I+ + G I+ + + S + +++ G + AE + +I++G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLK 446
PN ++ TL ++ + +A+ LK
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLK 485
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 135/314 (42%), Gaps = 9/314 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG ++ + +A A ++++M G + + + Y ++M Y + ++ + +M
Sbjct: 308 TYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDM 367
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G++ D+ +YNI + + G +K GV E ++ ++ + P T++++ Y+K G
Sbjct: 368 VSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLL-PTIETYTSILDGYVKGGH 426
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
++KA E R+++ V Y+ LLS + E + + L V P Y
Sbjct: 427 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVP--NERSY 484
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
A+ AR GD+E +F+ + D ++ K G +A F I +
Sbjct: 485 TALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITD 544
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEES 475
G K N ++ T+ +G R+ + +A LK + + +F KAC
Sbjct: 545 AGLKHNRITYCTMLDGWARKGELSKARDLLKDM----QKHGFHLDTICYTSFIKACFRSG 600
Query: 476 DMGSKEAFVALLRQ 489
D +A++R+
Sbjct: 601 DTEEVTETLAVMRE 614
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 114/270 (42%), Gaps = 1/270 (0%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R YG L++ Y R + A + MR + Y ++ Y + ++ + + E
Sbjct: 132 REYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEE 191
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M +GI+L+ + +S S G+ E E FE K + V P ++++ Y + G
Sbjct: 192 MLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLV-PGGIVYNSIVQAYCQAG 250
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+E E L ++E + Y +L+ + + +E+ ++ ++ T Y
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 310
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ + G++ I EE S + I ++M Y + G+F A + ++
Sbjct: 311 CIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSA 370
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLK 446
G KP+ ++ L + R+ +AL L+
Sbjct: 371 GLKPDIVTYNILVHAFCKAGRMDKALGVLE 400
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 1/220 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +LL+ +AR NA L++D+M G + Y + Y + + ++ M MK
Sbjct: 449 YNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMK 508
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++ + +D+ +Y L +C G+ ++ VF+ + D + N T+ TM + + G++
Sbjct: 509 KENLAIDIVAYGALLKACCKSGAMQRAVEVFQQI-TDAGLKHNRITYCTMLDGWARKGEL 567
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
KA + L+ ++ D + Y + G EEV + R V Y +
Sbjct: 568 SKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTL 627
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
I D + +E+ + D ++N ++S +
Sbjct: 628 IHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGLI 667
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 107/265 (40%), Gaps = 36/265 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V+ ++++ Y A AE +K + + + YN ++ Y + + VE+++++M
Sbjct: 203 VFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQM 262
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+E+G + ++ Y L+ EK F +K ++P T+ + ++ K G
Sbjct: 263 EEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKA-CGLSPTAATYGCIVKLFTKAGN 321
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ KA + L ++ +++ Y ++ Y
Sbjct: 322 MAKALDILEEMDKHGVSPNKMIYAMIMDGY------------------------------ 351
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
AR GD K++E+ +S D N+++ + K G DKA +I
Sbjct: 352 -----ARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANR 406
Query: 418 GKPNSTSWETLAEGHIRERRILEAL 442
P ++ ++ +G+++ I +AL
Sbjct: 407 LLPTIETYTSILDGYVKGGHIQKAL 431
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/259 (18%), Positives = 106/259 (40%), Gaps = 7/259 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ++L+ YV+ A + D+++ G + YN +++ K ++ + M+ EM
Sbjct: 413 TYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEM 472
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G+ + SY G EK G+F+ MK + + + + + K G
Sbjct: 473 LANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN-LAIDIVAYGALLKACCKSGA 531
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP---GVTNLG 354
+++A E +++ +R+ Y +L + +K E+ + +L + + + +
Sbjct: 532 MQRAVEVFQQITDAGLKHNRITYCTMLDGW---ARKGELSKARDLLKDMQKHGFHLDTIC 588
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y + I + R GD E + + K + R ++ ++ + D+A + +
Sbjct: 589 YTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAK 648
Query: 415 EEGGKPNSTSWETLAEGHI 433
G + +S L G I
Sbjct: 649 ASGLQLDSALSNCLLSGLI 667
>gi|91806413|gb|ABE65934.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 279
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L + +K G ++ L ++K LR + ALE WM + + F L + D A +L L
Sbjct: 103 LLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQK-KVFNLFSEDYATRLHL 161
Query: 153 IAKVHGVASAEDFF-LSLPDTLKDRRVYGALLNAYVRA-RMRGNAELLIDKMRDKGYAVH 210
KV G+ AE+FF S+P+ +KD VY LL+ Y R+ + AE + +KMR+ G
Sbjct: 162 TEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSK 221
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
P+N +++LY + V ++ +MK K I D+ + N L + + + ME V
Sbjct: 222 LSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEKV 279
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI-FEEWLSVK 382
+SLYG G+ E+V+RVW+ Y++ N + +I SL ++GD +G EKI + EW
Sbjct: 1 MSLYGEAGEIEDVHRVWDKYKATRQK-DNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSG 59
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
+D RI ++++S Y ++G KA+ N +
Sbjct: 60 LEFDNRIPDMLVSGYREKGMVMKADKLVNKTL 91
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 10/260 (3%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AELL ++M +G S+ Y VM+ +Y KI E + +S M E+G +D ++ + +S
Sbjct: 189 AELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIIS 248
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+G T + F + VD + PN F+ M K G +++A E L + G
Sbjct: 249 RFSGKGYTTRALWYFRRL-VDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLE----EMVG 303
Query: 315 RDRVPYHYL-LSLYGSVGKK---EEVYRVW-NLYRSVFPGVTNLGYHAMISSLARIGDIE 369
+ P Y SL + KK E+ +R++ L RS L Y AMIS R +
Sbjct: 304 KGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLN 363
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
E + + ++ + K GNF++A N + EG PN ++ +
Sbjct: 364 RAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIV 423
Query: 430 EGHIRERRILEALSCLKGAF 449
G + R+ EA L+ F
Sbjct: 424 NGLCKRGRVQEAYKMLEDGF 443
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
++ D G + + + M+ K + M+ EM KG + +VY++ + +G
Sbjct: 265 RLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKG 324
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
TEK +F + + PN T++ M + Y + ++ +AE L R++ + + Y
Sbjct: 325 WTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTY 384
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
L+ + G E Y + NL S Y+A+++ L + G ++ K+ E+
Sbjct: 385 TTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQ 444
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
D N++MS + K+ N +A A FN +++ G +P+ S+ TL RE R+ E
Sbjct: 445 NGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKE 504
Query: 441 A 441
+
Sbjct: 505 S 505
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 114/252 (45%), Gaps = 11/252 (4%)
Query: 197 LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
L + +R + + + L Y M++ Y + + + E ++S MKE+G+ + +Y +
Sbjct: 332 LFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGH 391
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
G+ E+ + LM + +PN T++ + K G+V++A + L D
Sbjct: 392 CKAGNFERAYDLMNLMS-SEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPD 450
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-----PGVTNLGYHAMISSLARIGDIEGM 371
+ Y+ L+S + K+E + + L+ + P + + Y +I+ R ++
Sbjct: 451 KFTYNILMSEHC---KQENIRQALALFNKMLKIGIQPDIHS--YTTLIAVFCRENRMKES 505
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
E FEE + + + M+ Y +EGN A FF+ + + G P+S ++ + G
Sbjct: 506 EMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISG 565
Query: 432 HIRERRILEALS 443
++ + EA S
Sbjct: 566 LCKQSKRDEARS 577
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 134/316 (42%), Gaps = 18/316 (5%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-------PDTLKD 175
K A E+ + M +G + + + I D + K A FL L P+ L
Sbjct: 292 KQAFEMLEEMVGKGWKPNVYTHTSLI--DGLCKKGWTEKAFRLFLKLVRSENHKPNVL-- 347
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
Y A+++ Y R AE+L+ +M+++G ++ Y ++ + K ++ +++
Sbjct: 348 --TYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMN 405
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
M +G ++ +YN ++ +G ++ + E + P+ T++ + + + K
Sbjct: 406 LMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE-DGFQNGLKPDKFTYNILMSEHCKQ 464
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG--KKEEVYRVWNLYRSVFPGVTNL 353
+ +A ++ D Y L++++ K+ E++ + + P TN
Sbjct: 465 ENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIP--TNK 522
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +MI R G++ K F + D ++S K+ D+A + ++S+
Sbjct: 523 TYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSM 582
Query: 414 IEEGGKPNSTSWETLA 429
IE+G P + TLA
Sbjct: 583 IEKGLVPCEVTRITLA 598
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 129/284 (45%), Gaps = 18/284 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +Y L+ + A +A LL+D+M+DKG+ + YN ++ + D +S++
Sbjct: 353 DITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLM 412
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM + + LD ++NI + +G +K VF+ M + +P T++ + +
Sbjct: 413 SEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMG-EHGCHPTVMTYNALIDGLYR 471
Query: 295 MGQVEKAEESLRRVES--------RIT-GRDRV-PYHYLLSLYGSVGKKEEVYRVWNLYR 344
G +E+A ++E R+T G ++V L L + + +V + + L R
Sbjct: 472 AGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLR 531
Query: 345 -----SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
V P V Y+ +I+ L + +++G ++F+E S D ++ +
Sbjct: 532 GIIESGVVPDVVT--YNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWR 589
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ A F +I+ GG P+ + T+ R +++ +A++
Sbjct: 590 AHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAIN 633
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 130/321 (40%), Gaps = 1/321 (0%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYG 180
R++ A+E + M + R +A Q+ + V +A A + L + Y
Sbjct: 159 RHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYI 218
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
L++ + M +A + D+M ++G Y V+++ ++ ++ MKE
Sbjct: 219 VLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKEN 278
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G D +Y ++LS G ++ FEL++ D +S + + G+ ++
Sbjct: 279 GCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQ-DGGFTLGLIGYSCLIDGLFQAGRFDE 337
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
+ + D Y L+ + G+ ++ + + + + Y+ ++
Sbjct: 338 GLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLK 397
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
+L +G+I+ + + E L D N+M+ K+G DKA F+ + E G P
Sbjct: 398 ALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHP 457
Query: 421 NSTSWETLAEGHIRERRILEA 441
++ L +G R + EA
Sbjct: 458 TVMTYNALIDGLYRAGMLEEA 478
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 124/257 (48%), Gaps = 7/257 (2%)
Query: 178 VYGALLNA-YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y L++A ++ RM G A+ +I +MR KG ++ YN+++ Y + + + +E
Sbjct: 391 TYNLLVHALFMEGRM-GEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 449
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M KGI +Y + + ++ + +FE + +D+ V+P+ F+ M + G
Sbjct: 450 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI-LDQGVSPDVIMFNAMVDGHCANG 508
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
VE+A L+ ++ + D V ++ L+ GK EE + + + ++ Y+
Sbjct: 509 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 568
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
+IS R GDI+ ++ +E LS+ ++P + N ++ K D AE ++
Sbjct: 569 TLISGYGRRGDIKDAFRVRDEMLSI--GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 626
Query: 415 EEGGKPNSTSWETLAEG 431
+G P+ +++ +L EG
Sbjct: 627 NKGISPDDSTYLSLIEG 643
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 145/317 (45%), Gaps = 17/317 (5%)
Query: 136 GERFRLSASDAA----IQLDLIAKVHGVASAEDF--FLSLPDTLKDRRVYGALLNAYVRA 189
E FRL S I ++++ K + A +F F+ + Y +++ Y
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSS- 296
Query: 190 RMRGNAE---LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV 246
RGN E ++D MR KG S Y +++ K +E + +M E G+ +
Sbjct: 297 --RGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 354
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
+YN + ++G E+ + M V K + P+ +T++ + G++ +A++ ++
Sbjct: 355 VTYNTLIDGYCNKGDLERAFSYRDEM-VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK 413
Query: 307 RVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLAR 364
+ + D + Y+ L++ Y G ++ + + N L + + P T++ Y ++I L+R
Sbjct: 414 EMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEP--THVTYTSLIYVLSR 471
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
++ + +FE+ L S D + N M+ + GN ++A + + P+ +
Sbjct: 472 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 531
Query: 425 WETLAEGHIRERRILEA 441
+ TL +G RE ++ EA
Sbjct: 532 FNTLMQGRCREGKVEEA 548
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG+L++ + A L DKM + G +++ YN ++ Y + + S
Sbjct: 318 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 377
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM +KGI V +YN+ + + +G + + + + M+ K + P+ T++ + Y +
Sbjct: 378 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGYSR 436
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G +KA + + S+ V Y L+ + + +E ++ L + V P V
Sbjct: 437 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV-- 494
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ ++AM+ G++E + +E D N +M +EG ++A +
Sbjct: 495 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 554
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ G KP+ S+ TL G+ R I +A
Sbjct: 555 MKRRGIKPDHISYNTLISGYGRRGDIKDAF 584
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 15/223 (6%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLID---KMRDKGYAVHSLPYNVMMTLYMKIK 225
+PD + Y L+N Y R GNA+ D +M KG + Y ++ + +
Sbjct: 421 IPDAI----TYNILINGYSRC---GNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN 473
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-VD-KAVNPNWT 283
E + + ++ ++G+ DV +N + + G+ E+ F L+K +D K+V P+
Sbjct: 474 RMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVER---AFMLLKEMDRKSVPPDEV 530
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
TF+T+ + G+VE+A L ++ R D + Y+ L+S YG G ++ +RV +
Sbjct: 531 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 590
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
S+ T L Y+A+I L + + + E++ +E ++ S D
Sbjct: 591 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 633
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 118/262 (45%), Gaps = 3/262 (1%)
Query: 182 LLNAYVRARMRGNAELL--IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
LL + R+ N EL + RD+ S+ +++++ + +++ DE MKE
Sbjct: 148 LLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKE 207
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
KGI + + N LS E M V ++ TF+ M + K G+++
Sbjct: 208 KGIVPKIETCNDMLSLFLKLNRME-MAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLK 266
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
KA E + +E + V Y+ ++ Y S G E R+ + R + Y ++I
Sbjct: 267 KAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLI 326
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
S + + G +E +F++ + + + N ++ Y +G+ ++A ++ + ++++G
Sbjct: 327 SGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM 386
Query: 420 PNSTSWETLAEGHIRERRILEA 441
P+ +++ L E R+ EA
Sbjct: 387 PSVSTYNLLVHALFMEGRMGEA 408
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 128/304 (42%), Gaps = 14/304 (4%)
Query: 140 RLSASDAAIQLDLIAKVHG--VASAEDFF--LSLPD---TLKDRRVYGALLNAYVRARMR 192
RL + A+QL + +V G +A+ + F L+L ++K V+ L+ R
Sbjct: 138 RLPSPKLALQL--LKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRA 195
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
A M++KG N M++L++K+ + + +EM I VY++NI
Sbjct: 196 DEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIM 255
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
++ +G +K M+ PN +++T+ Y G +E A L + +
Sbjct: 256 VNVLCKEGKLKKAREFIGFME-GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 314
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
D Y L+S G+ EE +++ + + Y+ +I GD+E
Sbjct: 315 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAF 374
Query: 373 KIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+E VK P ++ NL++ EG +A+ + ++G P++ ++ L
Sbjct: 375 SYRDEM--VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 432
Query: 431 GHIR 434
G+ R
Sbjct: 433 GYSR 436
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Query: 162 AEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAE---LLIDKMRDKGYAVHSLPYNV 216
A+D F + D D ++ A+++ + GN E +L+ +M K + +N
Sbjct: 478 ADDLFEKILDQGVSPDVIMFNAMVDGHC---ANGNVERAFMLLKEMDRKSVPPDEVTFNT 534
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
+M + + +E ++ EMK +GI+ D SYN +S G +G + V + M +
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM-LSI 593
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
NP T++ + K + + AEE L+ + ++ D Y L+ G+V
Sbjct: 594 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 647
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 134/323 (41%), Gaps = 45/323 (13%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG ++N + +A + KM+ + + YN ++ K DE +
Sbjct: 174 DEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLC 233
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM E GI LDVYSYN + S G + + + M V V P+ TF+ + K
Sbjct: 234 TEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCK 293
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVT 351
+G+V +A + + R D V Y+ L++ Y GSVG+ ++V+ + R+ P V
Sbjct: 294 LGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM-VERTALPNV- 351
Query: 352 NLGYHAMISSLARIGDI-EGMEKIFE----------------------------EWLSVK 382
+ Y +I+ ++ + E M + E EW V+
Sbjct: 352 -ISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVE 410
Query: 383 S------SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ D N+++ Y K FDKA A F IIE G PN ++ L +G +
Sbjct: 411 AMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSG 470
Query: 437 RILEALSCLKGAFAAEGAKSWRP 459
R+ A K F AK +P
Sbjct: 471 RLKYA----KEIFQLLSAKGCQP 489
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 119/268 (44%), Gaps = 2/268 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL-PYNVMMTLYMKIKEYDEVESM 233
D Y ++++ + A L+D+M +G + +N+++ K+ E ++
Sbjct: 244 DVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNV 303
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
V+ M ++G + D+ SYN ++ GS + + VF+ M V++ PN ++ T+ Y
Sbjct: 304 VAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM-VERTALPNVISYCTLINGYC 362
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K+ V++A L + ++ D V Y+ LL G+ + + R+ +
Sbjct: 363 KVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLI 422
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ ++ + + +F+ + + S + R N+++ K G A+ F +
Sbjct: 423 TYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLL 482
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
+G +PN ++ + G +E + EA
Sbjct: 483 SAKGCQPNIRTYNIMIHGLCKEGFLDEA 510
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 133/324 (41%), Gaps = 61/324 (18%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PDTLK 174
R++ A+++ D M RG+ + I +D + K+ V+ A + + PD +
Sbjct: 260 RFQAAVKLLDEMVVRGKVYP-DVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVS 318
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
Y AL+N Y + G A+ + DKM ++ + + Y ++ Y K++ DE ++
Sbjct: 319 ----YNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLL 374
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM K + D +YN C G ++ ++E W M
Sbjct: 375 TEMHNKNLVPDTVTYN-----CLLDGLSKSGRSLYE-----------WDLVEAM------ 412
Query: 295 MGQVEKAEESLRRVESRITGR--DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF----- 347
R +G+ D + Y+ LL Y K E+ + L++ +
Sbjct: 413 ----------------RASGQPADLITYNVLLDDYF---KHEKFDKALALFQHIIEIGIS 453
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P + Y+ ++ L + G ++ ++IF+ + + R N+M+ KEG D+AE
Sbjct: 454 PNIRT--YNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAE 511
Query: 408 AFFNSIIEEGGKPNSTSWETLAEG 431
A ++ PN +++T+
Sbjct: 512 ALLYKMVNNNYLPNYITFDTIVRA 535
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 6/284 (2%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D + L++ + + + L+++M G + Y ++ + K DE
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++ M G + + SY I L S G E + M + + PN TF+T+
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM-IQQGCPPNPVTFNTLIN 469
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
K G VE+A E L+++ D + Y ++ G GK EE + N+ +
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y ++ +L+R G + + ++F+ D + N ++S K D+A FF
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFF 589
Query: 411 NSIIEEGGKPNSTSWETL-----AEGHIRERRILEALSCLKGAF 449
++ G PN +++ L +EG +E + L + C +GA
Sbjct: 590 AYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 118/264 (44%), Gaps = 1/264 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R+Y +++ + A ++++M G + + YN ++ + + E E ++
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM +K LD ++NI + G +++ + E M + P+ T++T+ + K
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LSHGCMPDVITYTTVINGFCK 403
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G +++A L+ + S + V Y +L S G+ + + + +
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +I+ L + G +E ++ ++ L S D + ++ K G ++A N ++
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
+G PN+ + ++A RE R+
Sbjct: 524 NKGISPNTIIYSSIACALSREGRV 547
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 4/279 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +L A R+ N+ +++ M KG + + N+++ + DE ++ ++
Sbjct: 148 MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL 207
Query: 238 KEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
G D+ SYN L C ++ + E + E+++VD A PN TF+T+ + G
Sbjct: 208 AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA--PNIVTFNTLIGYLCRNG 265
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
E+ E L ++ D Y ++ G E + N S + Y+
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L + E++ E D N+++ ++ + G D+ ++
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
G P+ ++ T+ G +E I EA+ LK + ++ G K
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLK-SMSSCGCK 423
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 134/329 (40%), Gaps = 9/329 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRVY 179
+++++ V + M+ +G L + + L+ I + V A L+ D Y
Sbjct: 162 FRNSVRVLEAMHAKG--CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSY 219
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
A+L A+ G+ E L+D+M A + + +N ++ + ++ V ++++M E
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
G D+ Y + +G E + M + PN ++T+ + +
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMP-SYGLKPNVVCYNTVLKGLCSAERWK 338
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
+AEE L + + D V ++ L+ + G + V + L P V + Y
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV--ITYTT 396
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I+ + G I+ + + S + +++ G + AE + +I++G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLK 446
PN ++ TL ++ + +A+ LK
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ +A A L++ M +KG + +++ Y+ + + ++V M +K
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ IR D YN +SS + T++ F M V PN +T++ + G
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYM-VSNGCMPNESTYTMLIKGLASEGLA 617
Query: 299 EKAEESLRRVESRITGRDRVPYHY 322
++A+E L + SR R + H+
Sbjct: 618 KEAQELLSELCSRGALRKHLMRHF 641
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 6/284 (2%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D + L++ + + + L+++M G + Y ++ + K DE
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++ M G + + SY I L S G E + M + + PN TF+T+
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM-IQQGCPPNPVTFNTLIN 469
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
K G VE+A E L+++ D + Y ++ G GK EE + N+ +
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y ++ +L+R G + + ++F+ D + N ++S K D+A FF
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFF 589
Query: 411 NSIIEEGGKPNSTSWETL-----AEGHIRERRILEALSCLKGAF 449
++ G PN +++ L +EG +E + L + C +GA
Sbjct: 590 AYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 118/264 (44%), Gaps = 1/264 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R+Y +++ + A ++++M G + + YN ++ + + E E ++
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM +K LD ++NI + G +++ + E M + P+ T++T+ + K
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LSHGCMPDVITYTTVINGFCK 403
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G +++A L+ + S + V Y +L S G+ + + + +
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +I+ L + G +E ++ ++ L S D + ++ K G ++A N ++
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
+G PN+ + ++A RE R+
Sbjct: 524 NKGISPNTIIYSSIACALSREGRV 547
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 4/279 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +L A R+ N+ +++ M KG + + N+++ + DE ++ ++
Sbjct: 148 MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL 207
Query: 238 KEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
G D+ SYN L C ++ + E + E+++VD A PN TF+T+ + G
Sbjct: 208 AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA--PNIVTFNTLIGYLCRNG 265
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
E+ E L ++ D Y ++ G E + N S + Y+
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L + E++ E D N+++ ++ + G D+ ++
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
G P+ ++ T+ G +E I EA+ LK + ++ G K
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLK-SMSSCGCK 423
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 134/329 (40%), Gaps = 9/329 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRVY 179
+++++ V + M+ +G L + + L+ I + V A L+ D Y
Sbjct: 162 FRNSVRVLEAMHAKG--CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSY 219
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
A+L A+ G+ E L+D+M A + + +N ++ + ++ V ++++M E
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
G D+ Y + +G E + M + PN ++T+ + +
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMP-SYGLKPNVVCYNTVLKGLCSAERWK 338
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
+AEE L + + D V ++ L+ + G + V + L P V + Y
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV--ITYTT 396
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I+ + G I+ + + S + +++ G + AE + +I++G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLK 446
PN ++ TL ++ + +A+ LK
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ +A A L++ M +KG + +++ Y+ + + ++V M +K
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ IR D YN +SS + T++ F M V PN +T++ + G
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYM-VSNGCMPNESTYTMLIKGLASEGLA 617
Query: 299 EKAEESLRRVESRITGRDRVPYHY 322
++A+E L + SR R + H+
Sbjct: 618 KEAQELLSELCSRGALRKHLMRHF 641
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 124/257 (48%), Gaps = 7/257 (2%)
Query: 178 VYGALLNA-YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y L++A ++ RM G A+ +I +MR KG ++ YN+++ Y + + + +E
Sbjct: 369 TYNLLVHALFMEGRM-GEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 427
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M KGI +Y + + ++ + +FE + +D+ V+P+ F+ M + G
Sbjct: 428 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI-LDQGVSPDVIMFNAMVDGHCANG 486
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
VE+A L+ ++ + D V ++ L+ GK EE + + + ++ Y+
Sbjct: 487 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 546
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
+IS R GDI+ ++ +E LS+ ++P + N ++ K D AE ++
Sbjct: 547 TLISGYGRRGDIKDAFRVRDEMLSI--GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 604
Query: 415 EEGGKPNSTSWETLAEG 431
+G P+ +++ +L EG
Sbjct: 605 NKGISPDDSTYLSLIEG 621
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 145/317 (45%), Gaps = 17/317 (5%)
Query: 136 GERFRLSASDAA----IQLDLIAKVHGVASAEDF--FLSLPDTLKDRRVYGALLNAYVRA 189
E FRL S I ++++ K + A +F F+ + Y +++ Y
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSS- 274
Query: 190 RMRGNAE---LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV 246
RGN E ++D MR KG S Y +++ K +E + +M E G+ +
Sbjct: 275 --RGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 332
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
+YN + ++G E+ + M V K + P+ +T++ + G++ +A++ ++
Sbjct: 333 VTYNTLIDGYCNKGDLERAFSYRDEM-VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK 391
Query: 307 RVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLAR 364
+ + D + Y+ L++ Y G ++ + + N L + + P T++ Y ++I L+R
Sbjct: 392 EMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEP--THVTYTSLIYVLSR 449
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
++ + +FE+ L S D + N M+ + GN ++A + + P+ +
Sbjct: 450 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 509
Query: 425 WETLAEGHIRERRILEA 441
+ TL +G RE ++ EA
Sbjct: 510 FNTLMQGRCREGKVEEA 526
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG+L++ + A L DKM + G +++ YN ++ Y + + S
Sbjct: 296 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 355
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM +KGI V +YN+ + + +G + + + + M+ K + P+ T++ + Y +
Sbjct: 356 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGYSR 414
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G +KA + + S+ V Y L+ + + +E ++ L + V P V
Sbjct: 415 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV-- 472
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ ++AM+ G++E + +E D N +M +EG ++A +
Sbjct: 473 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 532
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ G KP+ S+ TL G+ R I +A
Sbjct: 533 MKRRGIKPDHISYNTLISGYGRRGDIKDAF 562
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 15/223 (6%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLID---KMRDKGYAVHSLPYNVMMTLYMKIK 225
+PD + Y L+N Y R GNA+ D +M KG + Y ++ + +
Sbjct: 399 IPDAI----TYNILINGYSRC---GNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN 451
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-VD-KAVNPNWT 283
E + + ++ ++G+ DV +N + + G+ E+ F L+K +D K+V P+
Sbjct: 452 RMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVER---AFMLLKEMDRKSVPPDEV 508
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
TF+T+ + G+VE+A L ++ R D + Y+ L+S YG G ++ +RV +
Sbjct: 509 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 568
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
S+ T L Y+A+I L + + + E++ +E ++ S D
Sbjct: 569 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 611
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 118/262 (45%), Gaps = 3/262 (1%)
Query: 182 LLNAYVRARMRGNAELL--IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
LL + R+ N EL + RD+ S+ +++++ + +++ DE MKE
Sbjct: 126 LLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKE 185
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
KGI + + N LS E M V ++ TF+ M + K G+++
Sbjct: 186 KGIVPKIETCNDMLSLFLKLNRME-MAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLK 244
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
KA E + +E + V Y+ ++ Y S G E R+ + R + Y ++I
Sbjct: 245 KAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLI 304
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
S + + G +E +F++ + + + N ++ Y +G+ ++A ++ + ++++G
Sbjct: 305 SGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM 364
Query: 420 PNSTSWETLAEGHIRERRILEA 441
P+ +++ L E R+ EA
Sbjct: 365 PSVSTYNLLVHALFMEGRMGEA 386
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 128/304 (42%), Gaps = 14/304 (4%)
Query: 140 RLSASDAAIQLDLIAKVHG--VASAEDFF--LSLPD---TLKDRRVYGALLNAYVRARMR 192
RL + A+QL + +V G +A+ + F L+L ++K V+ L+ R
Sbjct: 116 RLPSPKLALQL--LKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRA 173
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
A M++KG N M++L++K+ + + +EM I VY++NI
Sbjct: 174 DEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIM 233
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
++ +G +K M+ PN +++T+ Y G +E A L + +
Sbjct: 234 VNVLCKEGKLKKAREFIGFME-GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 292
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
D Y L+S G+ EE +++ + + Y+ +I GD+E
Sbjct: 293 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAF 352
Query: 373 KIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+E VK P ++ NL++ EG +A+ + ++G P++ ++ L
Sbjct: 353 SYRDEM--VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 410
Query: 431 GHIR 434
G+ R
Sbjct: 411 GYSR 414
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Query: 162 AEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAE---LLIDKMRDKGYAVHSLPYNV 216
A+D F + D D ++ A+++ + GN E +L+ +M K + +N
Sbjct: 456 ADDLFEKILDQGVSPDVIMFNAMVDGHC---ANGNVERAFMLLKEMDRKSVPPDEVTFNT 512
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
+M + + +E ++ EMK +GI+ D SYN +S G +G + V + M +
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM-LSI 571
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
NP T++ + K + + AEE L+ + ++ D Y L+ G+V
Sbjct: 572 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 625
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/373 (17%), Positives = 163/373 (43%), Gaps = 6/373 (1%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+A + E+ G L ++ L K+RR AL+++ +M + + + IQ
Sbjct: 99 AAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQ 158
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
ASA ++ + + + + L++ + + AE ++ M + G
Sbjct: 159 GLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP 218
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+ YN +M Y E E + M KG + DV+SY+I ++ ++ + +F
Sbjct: 219 DVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLF 278
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
M + + PN +++T+ ++G++ +A++ + + + + Y LL +
Sbjct: 279 NEM-IHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCK 337
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
G + +R++ +S + + Y+ +++++ + G+++ ++F E + + +I
Sbjct: 338 QGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQI 397
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL---- 445
+++ KEG D+A F ++ ++G P+ S+ + G ++ + A+ +
Sbjct: 398 YTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR 457
Query: 446 -KGAFAAEGAKSW 457
+G G +W
Sbjct: 458 DRGFITDAGTTAW 470
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 94/221 (42%), Gaps = 5/221 (2%)
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
K+ ++ + + +M +G + D Y+Y ++ G T G+F+ M+ + N
Sbjct: 57 KVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKME-EAGCQLNV 115
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
T+ST+ K +V +A + ++++ Y L+ + + +E + N
Sbjct: 116 VTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNE 175
Query: 343 YRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
S + P V ++ ++ + + G + E + + + D N +M Y
Sbjct: 176 MTSLNIMPNVVT--FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMW 233
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+A F+ +I +G KP+ S+ L G+ + +RI EA
Sbjct: 234 TEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEA 274
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 8/275 (2%)
Query: 165 FFLSLPD---TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY 221
FFLS + D Y L+NAY R + A L++ +G L YN ++
Sbjct: 278 FFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGL 337
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
KI +YD + ++ EM + G+ + +YN L + + + + +F+ M + V P+
Sbjct: 338 CKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMS-RRGVLPD 396
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
+FS++ + + G + +A R +E D V Y L+ + G + ++ +
Sbjct: 397 LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD 456
Query: 342 --LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
L R F V Y+ ++ L + + +F E + D ++ Y K
Sbjct: 457 EMLARGCFMDVVT--YNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCK 514
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+GN DKA F +++ KP+ ++ TL +G +
Sbjct: 515 DGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 146/326 (44%), Gaps = 9/326 (2%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGAL 182
A E++D M+ RG L + + I ++A+ + A F + + D +Y L
Sbjct: 381 AQEIFDEMSRRGVLPDLVSFSSLI--GVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
++ + R +A + D+M +G + + YN + K K + + + + +EM E+G+
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
D Y++ + G+ +K +FE M V + P+ T++T+ + K G++ +A+
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAM-VRTNLKPDKVTYNTLIDGFCKAGEMGRAK 557
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMIS 360
E + + D + Y +L+ + S G E + + L + + P + + +I
Sbjct: 558 ELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC--NTLIK 615
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
R GD+ + + +S D N ++ Y+KE N +KA N + + G +
Sbjct: 616 GYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQF 675
Query: 421 NSTSWETLAEGHIRERRILEALSCLK 446
N ++ + G E ++ EA L+
Sbjct: 676 NIITYNLILNGFCAEGKMQEAEQVLR 701
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 134/315 (42%), Gaps = 18/315 (5%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
++NA + R N + M KG + YN ++ Y + +E +++ +G
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
+ + +YN L G ++ + V E++++ + PN T++T+ + + +
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL--GLTPNAATYNTLLVEICRRDNILE 380
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR-----SVFPGVTNLGY 355
A+E + R D V + SL G + + +Y+ +R + P N+ Y
Sbjct: 381 AQEIFDEMSRRGVLPDLVSFS---SLIGVLARNGHLYQALMHFREMERSGIVP--DNVIY 435
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I R G + K+ +E L+ D N ++ K+ F A+ FN ++E
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE 495
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEES 475
G P+ ++ TL G+ ++ + +AL+ F A + +P V +
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALN----LFEAMVRTNLKPDKVTYNTLIDGFCKAG 551
Query: 476 DMG-SKEAFVALLRQ 489
+MG +KE + ++R+
Sbjct: 552 EMGRAKELWDDMIRK 566
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
L+ Y R+ A + KM G S YN ++ Y+K ++ +++EM+++
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G++ ++ +YN+ L+ ++G ++ E V M ++ +NP+ T+S++ ++ +++
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKM-IEIGINPDGATYSSLINGHVSQDNMKE 730
Query: 301 A----EESLRR 307
A +E L+R
Sbjct: 731 AFRFHDEMLQR 741
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D + D YG +LN + + + A L D+M +KG + + N ++ Y + + +
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKA 626
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+S+M GI D +SYN + + + EK + M+ + + N T++ +
Sbjct: 627 YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEME-KRGLQFNIITYNLILN 685
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFP 348
+ G++++AE+ LR++ D Y L++ + S +E +R + L R + P
Sbjct: 686 GFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 142/352 (40%), Gaps = 40/352 (11%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
FL + + Y +L++ + +A A +LI+KM ++G Y+V++ K K
Sbjct: 585 FLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQK 644
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ +E S++ +M G++ ++ +Y I +S +G + + +F M + P+ TT+
Sbjct: 645 KLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM-ISSGHKPSATTY 703
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ + Y K+GQ+E+AE + +E D V YH ++ G +G + +
Sbjct: 704 TVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAF-------- 755
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL-------MMSWYV 398
S+L R+ D + WL +K + N M +W
Sbjct: 756 --------------STLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWI- 800
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWR 458
+ +++ G P ++ ++ G + R+ EA L K+
Sbjct: 801 ---ELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML----GKAIS 853
Query: 459 PKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRK--EKDYMSLIGLTDEA 508
P K C + G +FV + + G++ E + ++GL DE
Sbjct: 854 PNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEG 905
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 120/271 (44%), Gaps = 18/271 (6%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y ++++ Y + M G A + M +G ++ Y ++ ++ K+ + +++++M
Sbjct: 460 IYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKM 519
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKME-----GVFELMKVDKAVNPNWTTFSTMATMY 292
+E GI V +Y + QG +K E +FE+M+ + P+ ++ +
Sbjct: 520 QEDGITPGVIAYTTLI-----QGQCKKHEFDNAFRLFEMME-KNGLTPDEQAYNVLTDAL 573
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K G+ E+A L R +T +V Y L+ + G + + + + V G
Sbjct: 574 CKSGRAEEAYSFLVRKGVVLT---KVTYTSLVDGFSKAGNTD--FAAVLIEKMVNEGCKA 628
Query: 353 --LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
Y ++ +L + + I ++ + +++S +KEG D A++ F
Sbjct: 629 DLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLF 688
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N +I G KP++T++ + + +I EA
Sbjct: 689 NEMISSGHKPSATTYTVFISSYCKIGQIEEA 719
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 97/254 (38%), Gaps = 4/254 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG+L+ ++ + A LI KM++ G + Y ++ K E+D + M
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMM 554
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ G+ D +YN+ + G E+ V K V T++++ + K G
Sbjct: 555 EKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL----VRKGVVLTKVTYTSLVDGFSKAGN 610
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ A + ++ + D Y LL K E + + + Y
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+IS + + G + + +F E +S + +S Y K G ++AE + +G
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 730
Query: 418 GKPNSTSWETLAEG 431
P+ ++ G
Sbjct: 731 VTPDVVTYHIFING 744
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 115/265 (43%), Gaps = 2/265 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+ AR A +L+ M G +++ Y +++ K + ++ EM
Sbjct: 252 YTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMP 311
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+G+ V++YN + G + G+ LM+ + +WT S + + G++
Sbjct: 312 LRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC--GGKL 369
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
++AEE L +R + + L++ Y + ++ RV + S + Y +
Sbjct: 370 DEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVL 429
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I+ L + ++ ++ E + + + I ++ Y K G A F + EG
Sbjct: 430 INVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGC 489
Query: 419 KPNSTSWETLAEGHIRERRILEALS 443
PN+ ++ +L G I+++++ +A++
Sbjct: 490 HPNAWTYGSLIYGLIQDKKLHKAMA 514
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 112/275 (40%), Gaps = 8/275 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ALL Y R A L+ M G + Y +++ + + E +V
Sbjct: 213 DTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLV 272
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M + G L+++ Y + + +G G+ + M + + V P+ T++ M Y K
Sbjct: 273 FMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPL-RGVVPSVWTYNAMIDGYCK 331
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK-EEVYRVWN--LYRSVFPGVT 351
G+++ A +E D Y+ L +YG G K +E + N + R P V
Sbjct: 332 SGRMKDALGIKALMEQNGCNPDDWTYNSL--IYGLCGGKLDEAEELLNGAIARGFTPTV- 388
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ + +I+ + I+ ++ +S D + ++++ +K+ +A+ N
Sbjct: 389 -ITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLN 447
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ G PN + ++ +G+ + + AL K
Sbjct: 448 EMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFK 482
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 160/357 (44%), Gaps = 15/357 (4%)
Query: 150 LDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+DL K+ + A F L D Y +++N + +A++ A LL+ +MRD
Sbjct: 221 IDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAV 280
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
++ Y+ ++ +Y+ +++ E S+ SEM E LD+ + NI + G ++ +
Sbjct: 281 QPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADR 340
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+F M+ + PN +++T+ +Y + +A R ++S+ ++ V Y+ ++++Y
Sbjct: 341 LFWSMR-KMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIY 399
Query: 328 GSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G + E+ + R + P + Y +IS + G ++ +F++ S
Sbjct: 400 GKTLEHEKATNLIQEMNKRGIEPNA--ITYSTIISIWEKAGKLDRAAILFQKLRSSGVRI 457
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
D + M+ Y + G A+ + + P T+ LA R RI EA
Sbjct: 458 DEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIAILA----RAGRIEEATWVF 513
Query: 446 KGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
+ AF A K +IN F ++ +++ E F +R+ GY + D ++L+
Sbjct: 514 RQAFDAREVKDISVFGC-MINLFSKNKKYANV--VEVFEK-MREVGYFPDSDVIALV 566
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 145/320 (45%), Gaps = 24/320 (7%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PDTL 173
+++ AL ++ MN + L + I +D+ ++H A+ F S+ P+ +
Sbjct: 298 QKFVEALSLFSEMNE--AKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVI 355
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
Y LL Y A + G A L M+ K + + YN M+ +Y K E+++ ++
Sbjct: 356 S----YNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNL 411
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EM ++GI + +Y+ +S G ++ +F+ ++ V + + TM Y
Sbjct: 412 IQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLR-SSGVRIDEVLYQTMIVAYE 470
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG--VT 351
+ G V A +R+ + D +P +++ G+ EE W ++R F V
Sbjct: 471 RTGLVAHA----KRLLHELKRPDNIPRDTAIAILARAGRIEEA--TW-VFRQAFDAREVK 523
Query: 352 NLG-YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
++ + MI+ ++ + ++FE+ V D + L+++ + K FDKA+A +
Sbjct: 524 DISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALVLNAFGKLREFDKADALY 583
Query: 411 NSIIEEGGK-PNSTSWETLA 429
+ EEG P+ ++ L+
Sbjct: 584 RQMHEEGCVFPDEVHFQMLS 603
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 104/269 (38%), Gaps = 43/269 (15%)
Query: 167 LSLPDTLKDRRVYGALLNAY-------VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
L+L D + D+ +Y L AY +RA+ A L D+MR KG + Y+ ++T
Sbjct: 128 LALLDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLIT 187
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
+ K +D + +M++ + D+ Y+ + K +F +K +
Sbjct: 188 CFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKA-STIT 246
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
P+ +++M ++ K +A L+ + D V Y LL++Y
Sbjct: 247 PDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIY------------ 294
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
V N + +S +F E K D N+M+ Y +
Sbjct: 295 ----------VDNQKFVEALS-------------LFSEMNEAKCPLDLTTCNIMIDVYGQ 331
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+A+ F S+ + G +PN S+ TL
Sbjct: 332 LHMPKEADRLFWSMRKMGIQPNVISYNTL 360
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+KD V+G ++N + + + N + +KMR+ GY S +++ + K++E+D+ ++
Sbjct: 522 VKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALVLNAFGKLREFDKADA 581
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS-TMATM 291
+ +M E+G + LS G++ +E +FE K+D N N +A++
Sbjct: 582 LYRQMHEEGCVFPDEVHFQMLSLYGARKDFVMVESLFE--KLDSNPNINKKELHLVVASI 639
Query: 292 YIKMGQVEKAEESLRRVESR 311
Y + ++ A + R+ +
Sbjct: 640 YERADRLNDASRIMNRMNKK 659
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 6/284 (2%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D + L++ + + + L+++M G + Y ++ + K DE
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++ M G + + SY I L S G E + M + + PN TF+T+
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM-IQQGCPPNPVTFNTLIN 469
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
K G VE+A E L+++ D + Y ++ G GK EE + N+ +
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y ++ +L+R G + + ++F+ D + N ++S K D+A FF
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFF 589
Query: 411 NSIIEEGGKPNSTSWETL-----AEGHIRERRILEALSCLKGAF 449
++ G PN +++ L +EG +E + L + C +GA
Sbjct: 590 AYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 118/264 (44%), Gaps = 1/264 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R+Y +++ + A ++++M G + + YN ++ + + E E ++
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM +K LD ++NI + G +++ + E M + P+ T++T+ + K
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LSHGCMPDVITYTTVINGFCK 403
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G +++A L+ + S + V Y +L S G+ + + + +
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +I+ L + G +E ++ ++ L S D + ++ K G ++A N ++
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
+G PN+ + ++A RE R+
Sbjct: 524 NKGISPNTIIYSSIACALSREGRV 547
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 4/279 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +L A R+ N+ +++ M KG + + N+++ + DE ++ ++
Sbjct: 148 MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL 207
Query: 238 KEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
G D+ SYN L C ++ + E + E+++VD A PN TF+T+ + G
Sbjct: 208 AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA--PNIVTFNTLIGYLCRNG 265
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
E+ E L ++ D Y ++ G E + N S + Y+
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L + E++ E D N+++ ++ + G D+ ++
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
G P+ ++ T+ G +E I EA+ LK + ++ G K
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLK-SMSSCGCK 423
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 134/329 (40%), Gaps = 9/329 (2%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRVY 179
+++++ V + M+ +G L + + L+ I + V A L+ D Y
Sbjct: 162 FRNSVRVLEAMHAKG--CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSY 219
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
A+L A+ G+ E L+D+M A + + +N ++ + ++ V ++++M E
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
G D+ Y + +G E + M + PN ++T+ + +
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMP-SYGLKPNVVCYNTVLKGLCSAERWK 338
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
+AEE L + + D V ++ L+ + G + V + L P V + Y
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV--ITYTT 396
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I+ + G I+ + + S + +++ G + AE + +I++G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLK 446
PN ++ TL ++ + +A+ LK
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLK 485
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 115/265 (43%), Gaps = 5/265 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++A ++ +A L+++ M + G A + + YN ++ + K+ DE + ++M
Sbjct: 105 YTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQML 164
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E DV++YNI + Q + + + M V PN+ T++T+ +K G+
Sbjct: 165 ENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM-VKYGCEPNFITYNTLMDSLVKSGKY 223
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYH 356
A + + R ++ ++ ++ VG+ + Y ++ L R P + Y+
Sbjct: 224 IDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT--YN 281
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
MIS R I+ ++ E D N ++S K D+A + +
Sbjct: 282 IMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG 341
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
G + + TL +G + RR+ +A
Sbjct: 342 GYFLDVVTCSTLIDGLCKSRRLDDA 366
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/392 (18%), Positives = 166/392 (42%), Gaps = 17/392 (4%)
Query: 64 DFERRPMIKWNAIFRKL--SLMDNPQLGSASV-LNDWEK-GGRSLTKWELCRVVKELRKF 119
+ E+R ++ NA++ + L DN ++ SA V D ++ S+ + + +V L K
Sbjct: 58 EMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTI--LVDALCKS 115
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK----- 174
R A + + M G A + LI + + ++ + L+
Sbjct: 116 ARISDASLILEDMIEAG-----CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSP 170
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ Y + + L+ +M G + + YN +M +K +Y + ++
Sbjct: 171 DVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLA 230
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M + + +++N+ + G + +F+LM D+ P+ T++ M + +
Sbjct: 231 QMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM-TDRGCLPDIYTYNIMISGACR 289
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+++ A + L R+ D V Y+ ++S + +E Y V+ + R+ + +
Sbjct: 290 ANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVT 349
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
+I L + ++ EK+ E S+ D +++ + K DK+ AFF+ ++
Sbjct: 350 CSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEML 409
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++G P ++ + + + R+ + LK
Sbjct: 410 DKGCVPTVITYSIVIDKLCKSARVRDGCMLLK 441
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 111/277 (40%), Gaps = 10/277 (3%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
L PD++ Y L+N + +AR A L+D+M +G H+ YN T+ + +
Sbjct: 28 LCSPDSI----TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYN---TIIKGLCD 80
Query: 227 YDEVESMVSEMK--EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
V+S + + ++ V +Y I + + + E M ++ PN T
Sbjct: 81 NGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDM-IEAGCAPNVVT 139
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
++T+ + K+G +++A ++ D Y+ L+ Y + ++ ++
Sbjct: 140 YNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 199
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ Y+ ++ SL + G + + L NLM+ + K G D
Sbjct: 200 KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLD 259
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A F + + G P+ ++ + G R RI +A
Sbjct: 260 LAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 158/357 (44%), Gaps = 35/357 (9%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
A+ L ++ G LT EL VK L + ++K ALEV++W+ + + F+L A L
Sbjct: 126 ATELLEFIAGELVLTDSELVYFVKALGRQGKWKKALEVFEWIR-KHDCFKLRGVATASIL 184
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
++ + +A + F SL +D+ Y++
Sbjct: 185 SVLGNHEQLPAALELFESLK--------------------------------QDESYSLD 212
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST-EKMEGVF 269
Y ++++ + + +DE ++ M+ +G R + +YN+ L G +G + ++++ +F
Sbjct: 213 VYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLF 272
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+ MK D ++P+ T++TM T I+ ++A + ++ +RV Y+ LL +YG
Sbjct: 273 QEMK-DLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGK 331
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
G +E + + + Y+ +I++ AR G + + + LS D
Sbjct: 332 GGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFT 391
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++S + + ++KA F + + PN ++ L + + R ++ + + K
Sbjct: 392 YCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 448
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 154/343 (44%), Gaps = 16/343 (4%)
Query: 103 SLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASA 162
SL + ++ L + RR+ + +++ M G+R +A + LDL K +
Sbjct: 210 SLDVYAYTSLISILSRARRFDEGITLFETMQREGQRG--NAVTYNVMLDLYGKR---GDS 264
Query: 163 EDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
D SL +KD + Y ++ A ++ A L +M++ G + + YN
Sbjct: 265 WDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNA 324
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
++ +Y K + E ++ EM+ GI ++ +YN +++ G ++ + + + + K
Sbjct: 325 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSL-LSK 383
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
+ P+ T+ T+ + + + + EKA E+ + + V Y+ L+ +YG + K +++
Sbjct: 384 GLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDM 443
Query: 337 YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMM 394
+V+ + + +++++ S G + + +F E ++ Y P + N+++
Sbjct: 444 MKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREM--KRAGYMPGVDTFNILI 501
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
Y + G D + + ++ G +P ++ L RE R
Sbjct: 502 ECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGR 544
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 11/248 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+R Y ALL+ Y + M A L+ +M G + + + YN ++ Y + DE ++
Sbjct: 318 NRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALK 377
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEK-MEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ KG+ D ++Y +S+ EK +E E+ K + PN T++ + +Y
Sbjct: 378 KSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTN--CTPNIVTYNILIDIYG 435
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV--FPGVT 351
+M +++ + + ++ + D V ++ LL +G+ G EV V+ + PGV
Sbjct: 436 RMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVD 495
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAF 409
++ +I R G ++ I++ L ++ P + +M+ +EG + + E
Sbjct: 496 T--FNILIECYGRCGYVDYSVDIYKGLL--RTGLQPTVPTFAALMASLAREGRWQQCEKV 551
Query: 410 FNSIIEEG 417
+ E G
Sbjct: 552 SQEMAEAG 559
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 105/249 (42%), Gaps = 9/249 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ AY RA + A L + KG Y +++ + + + Y++ +EM
Sbjct: 356 TYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEM 415
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ ++ +YNI + G + M VF+ M+ +K P+ T++++ + G
Sbjct: 416 RKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQ-EKNCTPDLVTWNSLLKSFGNCGM 474
Query: 298 VEKAEESLRRVE--SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
+ + R ++ + G D ++ L+ YG G + ++ L + P V
Sbjct: 475 LTEVSNVFREMKRAGYMPGVDT--FNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPT- 531
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+ A+++SLAR G + EK+ +E ++ Y G F + + + +
Sbjct: 532 -FAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDEL 590
Query: 414 IEEGGKPNS 422
+ +P S
Sbjct: 591 EKSAKQPLS 599
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 147/355 (41%), Gaps = 28/355 (7%)
Query: 101 GRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHG-V 159
G ++ C ++ + RY+ ALE + M + + + + +++ ++G +
Sbjct: 384 GLCPDEFTYCTLISAFNRAERYEKALETFTEMR------KTNCTPNIVTYNILIDIYGRM 437
Query: 160 ASAEDF-----FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPY 214
+D F+ + D + +LL ++ M + +M+ GY +
Sbjct: 438 EKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTF 497
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV 274
N+++ Y + D + + G++ V ++ ++S +G ++ E V + M
Sbjct: 498 NILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEM-A 556
Query: 275 DKAVNPNWTTFSTMATMYIKMGQ-------VEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ + + + + Y GQ +++ E+S ++ S I + ++L+ Y
Sbjct: 557 EAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKT-----FVLA-Y 610
Query: 328 GSVGKKEEVYRVWN-LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
G E N LY + + ++AMIS A+ G IE K+ EE + D
Sbjct: 611 CKCGMDNEAQLALNQLYDNGHSPDIKV-FNAMISMCAKRGWIERAVKLLEEIRKAQLKPD 669
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N +MS Y +EG + KAE + + G PN ++ TL + + R+ +A
Sbjct: 670 GVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDA 724
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 73/160 (45%)
Query: 275 DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
D +P+ F+ M +M K G +E+A + L + D V Y+ L+S+YG G
Sbjct: 628 DNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYY 687
Query: 335 EVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
+ V + R + Y+ ++ S + G ++ ++F + ++ + D N ++
Sbjct: 688 KAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLV 747
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
Y G + +A + + E G +P +++ L +G+ R
Sbjct: 748 GSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNR 787
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ Y R M AE ++ +MR G A + + YN ++ Y K D+ +
Sbjct: 669 DGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVF 728
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+M +R D +++N + S S G ++ V E M + P TF + Y
Sbjct: 729 GDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYM-TEHGCQPTQITFKALLDGY 785
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +V+ A+++ + A L++++R + YN +M++Y + Y + E ++
Sbjct: 634 DIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVM 693
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM+ G ++ +YN L S G + VF M V V P+ TF+T+ Y
Sbjct: 694 SEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM-VAARVRPDNFTFNTLVGSYSS 752
Query: 295 MGQVEKA 301
+G ++A
Sbjct: 753 LGLYKEA 759
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 117/283 (41%), Gaps = 9/283 (3%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK-GYAVHSLPYNVMMTLYMKIKEYD 228
PD + + AL N GN + R+ A S+ +N+++ K +
Sbjct: 138 PDVVTHSSIVQALCNT-------GNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLS 190
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
E M+ EM E+GI DV +YN + E+ + E M V + V PN T++T+
Sbjct: 191 EARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETM-VKRKVRPNLVTYNTL 249
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
Y K G A + + R+ T D V ++ L+S + K ++ V +L +
Sbjct: 250 IYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLC 309
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ Y+ +IS L G ++ E D N ++ + + ++A
Sbjct: 310 APNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQ 369
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
N ++E G P+ S+ TLA ++ R EA + L F A
Sbjct: 370 IQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDA 412
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 143/321 (44%), Gaps = 11/321 (3%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
A ++ M RG + + +Q + ++ A +F + D ++ L++
Sbjct: 124 AFQLLAEMKERGHSPDVVTHSSIVQA--LCNTGNLSRAMQYFRESVECAPDSVLFNILVH 181
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
+A A +I++M ++G + YN ++ K +E ++ M ++ +R
Sbjct: 182 GLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRP 241
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
++ +YN + G T + E M + +P+ TF+++ + + + +++KA E
Sbjct: 242 NLVTYNTLIYGYCKTGCTGLAHQLIERM-IQSGTHPDVVTFNSLISGFCQKSKIDKACEV 300
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSL 362
L ++ + + V Y+ L+S G+ E + + R + P + + Y+++I
Sbjct: 301 LHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDI--ITYNSLIGIF 358
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPR-IANLMMS-WYVKEGNFDKAEAFFNSIIEEGGKP 420
R IE +I + L V+ P I+ ++ +K FD+A A +++ + G P
Sbjct: 359 CRNFQIEQAFQI--QNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIP 416
Query: 421 NSTSWETLAEGHIRERRILEA 441
N ++ +L EG RR+ EA
Sbjct: 417 NLFTFNSLMEGLCCSRRLDEA 437
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 133/342 (38%), Gaps = 45/342 (13%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PD + Y +L++ ++ A L++ M + + + YN ++ Y K
Sbjct: 205 VPDVV----TYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTG 260
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
++ M + G DV ++N +S + +K V LMK PN T++ +
Sbjct: 261 LAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMK-KGLCAPNLVTYNVL 319
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSV 346
+ G+ +A E L ++ R D + Y+ L+ ++ + E+ +++ NL R V
Sbjct: 320 ISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGV 379
Query: 347 FPGVTNLGYHAMISSLAR-------------IGDIEGMEKIF------------------ 375
P + Y + +L + + D + +F
Sbjct: 380 IP--DGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEA 437
Query: 376 EEWLSV--KSSYDPRIAN--LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
L+V + DP + ++++ K G D A+ ++ EG +P +S T+
Sbjct: 438 RHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHT 497
Query: 432 HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
RE + AL AAE +K+ P ++ F K E
Sbjct: 498 LAREGKQDLALHYFDQVVAAE-SKACDPSYQKLLEFVKVLRE 538
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 110/268 (41%), Gaps = 8/268 (2%)
Query: 181 ALLNAYVRARMRGNA-ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
LL V+AR A ++ D++ + + + YN ++ + K + + +++EMKE
Sbjct: 74 CLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKE 133
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+G DV +++ + + + G+ + + + P+ F+ + K Q+
Sbjct: 134 RGHSPDVVTHSSIVQALCNTGNLSR---AMQYFRESVECAPDSVLFNILVHGLCKANQLS 190
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
+A + + + R D V Y+ L+ + EE ++ + R V P + Y+
Sbjct: 191 EARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVT--YNT 248
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I + G ++ E + + D N ++S + ++ DKA + + +
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCL 445
PN ++ L G R EA L
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELL 336
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 129/274 (47%), Gaps = 13/274 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D YG ++N + RG+ +L L+ KM + + YN ++ K K D+
Sbjct: 220 DLFTYGTVVNGLCK---RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAF 276
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ ++M+ KGI+ DV++YN +S + G + M +++ +NPN TF+++
Sbjct: 277 DLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDM-IERKINPNVVTFNSLIDA 335
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPG 349
+ K G++ +AE+ + R + V Y+ L++ + + +E +++ L S P
Sbjct: 336 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 395
Query: 350 VTNLGYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
V Y+ +I + + EGME +F E + N ++ + G+ D A+
Sbjct: 396 VVT--YNTLIKGFCKAKRVEEGME-LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 452
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F ++ +G P+ ++ L +G + ++ +AL
Sbjct: 453 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 486
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 143/315 (45%), Gaps = 14/315 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++ + + +A L +KM KG YN +++ + + ++S+M
Sbjct: 258 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDM 317
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E+ I +V ++N + + +G + E +F+ M + ++++PN T++++ + +
Sbjct: 318 IERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM-IQRSIDPNIVTYNSLINGFCMHDR 376
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE---VYRVWNLYRSVFPGVTNLG 354
+++A++ + S+ D V Y+ L+ + + EE ++R + V VT
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT--- 433
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +I L + GD + +KIF++ +S D ++++ K G +KA F +
Sbjct: 434 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 493
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEE 474
+ +PN ++ + EG + ++ + F + K +P NVI +
Sbjct: 494 KSKMEPNIYTYNIMIEGMCKAGKVEDGWD----LFCSLSLKGVKP---NVIIYTTMISGF 546
Query: 475 SDMGSKEAFVALLRQ 489
G KE AL R+
Sbjct: 547 CRKGLKEEADALFRE 561
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 5/265 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LLN + R A ++ KM GY + + ++ Y K E ++V +M
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E G + D ++N + + + + M V + P+ T+ T+ K G +
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRM-VARGCQPDLFTYGTVVNGLCKRGDI 237
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYH 356
+ A L+++E + V Y+ ++ ++ + ++N + + P V Y+
Sbjct: 238 DLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV--FTYN 295
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++IS L G ++ + + K + + N ++ + KEG +AE F+ +I+
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 355
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
PN ++ +L G R+ EA
Sbjct: 356 SIDPNIVTYNSLINGFCMHDRLDEA 380
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 151/352 (42%), Gaps = 17/352 (4%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
S+L EKG ++ L K++ A ++++ M +G + D
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK-----PDVFTYNS 296
Query: 152 LIAKVHGVASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDK 205
LI+ + D L D + +R++ + +L++A+ + AE L D+M +
Sbjct: 297 LISCLCNYGRWSDASRLLSDMI-ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 355
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEK 264
+ + YN ++ + DE + + + M K DV +YN + C ++ E
Sbjct: 356 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEG 415
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
ME E+ + + + N T++T+ + G + A++ +++ S D + Y LL
Sbjct: 416 MELFREMSQ--RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 473
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
GK E+ V+ + Y+ MI + + G +E +F LS+K
Sbjct: 474 DGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGV 532
Query: 385 Y-DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+ I M+S + ++G ++A+A F + E+G P+S + TL +R+
Sbjct: 533 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRD 584
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 2/236 (0%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D L D Y L+ + +A+ L +M +G +++ YN ++ + + D
Sbjct: 391 DCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 450
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ + +M G+ D+ +Y+I L G EK VFE ++ K + PN T++ M
Sbjct: 451 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK-MEPNIYTYNIMIE 509
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
K G+VE + + + + + Y ++S + G KEE ++ +
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 569
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
+ Y+ +I + R GD ++ +E S D +++++ + +G +K+
Sbjct: 570 DSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKS 624
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 159/361 (44%), Gaps = 21/361 (5%)
Query: 98 EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL-DLIAKV 156
+K + L+ +++ V+ EL++ ++ LEV+ W ++ + + S +L + +
Sbjct: 2 KKHPKPLSPFDITCVLTELQRQHDWRCTLEVFSW--SKKQSWYCPNSRLYTRLIGFLGRE 59
Query: 157 HGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG---YAVHS 211
V +A F + L D+ Y AL+NAY +A+M A + M++ ++
Sbjct: 60 GRVHNATLLFQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNT 119
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMK------EKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ N ++ +K YD+ + +M+ E G +V +YN+ + + +G +
Sbjct: 120 VTCNALIDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIG 179
Query: 266 EGVFELMK---VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
V + M+ D++V PN T++T+ K G EKAEE + + D + Y
Sbjct: 180 MKVLQYMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTA 239
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
L+ YG G E + + V + Y AMI + R G + E++F+ +
Sbjct: 240 LIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFK--MMQH 297
Query: 383 SSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
S P +M Y K G +++ FN + E G + N + +L + + + LE
Sbjct: 298 SGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLE 357
Query: 441 A 441
A
Sbjct: 358 A 358
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 1/187 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+NA + + AE L+D M + G + Y ++ Y K ++ E+ M
Sbjct: 201 TYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGM 260
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K + +DV +Y + + G +G +K E +F++M+ + PN T+ ++ Y K G
Sbjct: 261 KGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQ-HSGLRPNQVTYLSLMEAYGKAGL 319
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E++ + + + Y L+ YG G E R+ ++ R + Y A
Sbjct: 320 PEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQPNLITYSA 379
Query: 358 MISSLAR 364
++SS +
Sbjct: 380 ILSSCCK 386
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL++AY +A + NAE M+ +V + Y M+ Y + Y + E M
Sbjct: 233 DHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMF 292
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M+ G+R + +Y + + G G E+ VF +M+ + N +S++ Y K
Sbjct: 293 KMMQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMR-ESGYEGNVLIYSSLIDAYGK 351
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
G +A L + + + Y +LS
Sbjct: 352 AGNYLEAARMLDMMRRAGCQPNLITYSAILS 382
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 8/275 (2%)
Query: 165 FFLSLPD---TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY 221
FFLS + D Y L+NAY R + A L++ +G L YN ++
Sbjct: 278 FFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGL 337
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
KI +YD + ++ EM + G+ + +YN L + + + + +F+ M + V P+
Sbjct: 338 CKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMS-RRGVLPD 396
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
+FS++ + + G + +A R +E D V Y L+ + G + ++ +
Sbjct: 397 LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD 456
Query: 342 --LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
L R F V Y+ ++ L + + +F E + D ++ Y K
Sbjct: 457 EMLARGCFMDVVT--YNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCK 514
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+GN DKA F +++ KP+ ++ TL +G +
Sbjct: 515 DGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 146/326 (44%), Gaps = 9/326 (2%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGAL 182
A E++D M+ RG L + + I ++A+ + A F + + D +Y L
Sbjct: 381 AQEIFDEMSRRGVLPDLVSFSSLI--GVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
++ + R +A + D+M +G + + YN + K K + + + + +EM E+G+
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
D Y++ + G+ +K +FE M V + P+ T++T+ + K G++ +A+
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAM-VRTNLKPDKVTYNTLIDGFCKAGEMGRAK 557
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMIS 360
E + + D + Y +L+ + S G E + + L + + P + + +I
Sbjct: 558 ELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC--NTLIK 615
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
R GD+ + + +S D N ++ Y+KE N +KA N + + G +
Sbjct: 616 GYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQF 675
Query: 421 NSTSWETLAEGHIRERRILEALSCLK 446
N ++ + G E ++ EA L+
Sbjct: 676 NIITYNLILNGFCAEGKMQEAEQVLR 701
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 134/315 (42%), Gaps = 18/315 (5%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
++NA + R N + M KG + YN ++ Y + +E +++ +G
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
+ + +YN L G ++ + V E++++ + PN T++T+ + + +
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL--GLTPNAATYNTLLVEICRRDNILE 380
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR-----SVFPGVTNLGY 355
A+E + R D V + SL G + + +Y+ +R + P N+ Y
Sbjct: 381 AQEIFDEMSRRGVLPDLVSFS---SLIGVLARNGHLYQALMHFREMERSGIVP--DNVIY 435
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I R G + K+ +E L+ D N ++ K+ F A+ FN ++E
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE 495
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEES 475
G P+ ++ TL G+ ++ + +AL+ F A + +P V +
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALN----LFEAMVRTNLKPDKVTYNTLIDGFCKAG 551
Query: 476 DMG-SKEAFVALLRQ 489
+MG +KE + ++R+
Sbjct: 552 EMGRAKELWDDMIRK 566
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
L+ Y R+ A + KM G S YN ++ Y+K ++ +++EM+++
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G++ ++ +YN+ L+ ++G ++ E V M ++ +NP+ T+S++ ++ +++
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKM-IEIGINPDGATYSSLINGHVSQDNMKE 730
Query: 301 A----EESLRR 307
A +E L+R
Sbjct: 731 AFRFHDEMLQR 741
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D + D YG +LN + + + A L D+M +KG + + N ++ Y + + +
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKA 626
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+S+M GI D +SYN + + + EK + M+ + + N T++ +
Sbjct: 627 YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEME-KRGLQFNIITYNLILN 685
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFP 348
+ G++++AE+ LR++ D Y L++ + S +E +R + L R + P
Sbjct: 686 GFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 115/266 (43%), Gaps = 5/266 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++A ++ +A L+++ M + G A + + YN ++ + K+ DE + ++M
Sbjct: 238 TYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM 297
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E DV++YNI + Q + + + M V PN+ T++T+ +K G+
Sbjct: 298 LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM-VKYGCEPNFITYNTLMDSLVKSGK 356
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGY 355
A + + R ++ ++ ++ VG+ + Y ++ L R P + Y
Sbjct: 357 YIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT--Y 414
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ MIS R I+ ++ E D N ++S K D+A + +
Sbjct: 415 NIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRN 474
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
G + + TL +G + RR+ +A
Sbjct: 475 GGYFLDVVTCSTLIDGLCKSRRLDDA 500
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 133/339 (39%), Gaps = 20/339 (5%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF---- 166
RV+++L + A++ +DW + ++ S L + A D F
Sbjct: 104 RVLQQLDDLDK---AVKFFDWCTGQ-PGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHR 159
Query: 167 --LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
L PD++ Y L+N + +AR A L+D+M +G H+ YN T+ +
Sbjct: 160 CGLCSPDSI----TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYN---TIIKGL 212
Query: 225 KEYDEVESMVSEMK--EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
+ V+S + + ++ V +Y I + + + E M ++ PN
Sbjct: 213 CDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDM-IEAGCAPNV 271
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
T++T+ + K+G +++A ++ D Y+ L+ Y + ++ ++
Sbjct: 272 VTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQE 331
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ Y+ ++ SL + G + + L NLM+ + K G
Sbjct: 332 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ 391
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D A F + + G P+ ++ + G R RI +A
Sbjct: 392 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 430
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 105/268 (39%), Gaps = 1/268 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++++ +A A + + +R+ GY + + + ++ K + D+ E ++
Sbjct: 445 DVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLL 504
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+ G DV +Y I + +K F M +DK P T+S + K
Sbjct: 505 REMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM-LDKGCVPTVITYSIVIDKLCK 563
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+V L+ + R D + Y ++ +E Y ++ L + T +
Sbjct: 564 SARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVT 623
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ ++ L ++ ++ + E S D N + + K DKA F ++
Sbjct: 624 YNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMK 683
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEAL 442
G P + L + E ++ +A+
Sbjct: 684 SRGCSPTPFMYSLLLTKLVAEEKMDQAM 711
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 118/288 (40%), Gaps = 13/288 (4%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFL---- 167
+V L K + A EVY+ + N G + L + +D + K + AE
Sbjct: 452 IVSGLCKASQVDEAYEVYEVLRNGG--YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 509
Query: 168 --SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
S PD + Y L++ + +A + +M DKG + Y++++ K
Sbjct: 510 NGSAPDVV----AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 565
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ ++ M E+G+ D Y + S ++ +++LMK P T+
Sbjct: 566 RVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMK-QTGCAPTVVTY 624
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ + K+ ++++A L +ES D V Y+ + + + ++ +R++ +S
Sbjct: 625 NVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKS 684
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
T Y +++ L ++ +I+EE L + DP I+ +
Sbjct: 685 RGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 41/282 (14%)
Query: 162 AEDFFLSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTL 220
A+ F + D++K D +Y +LL+AY ++ A L + M+ K YN +M +
Sbjct: 30 AKKIFSDMDDSVKKDTVLYNSLLHAYCKSGQVETANELFNSMKQKDCRPDLSTYNTIMNM 89
Query: 221 YMKIK-EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
Y+K +V S+ EM +GI+ DV SY+I L++C + ++ + +F+ MK + +
Sbjct: 90 YVKTDVGLTKVLSLFKEMCLQGIQPDVVSYDILLAACAPKQHVKEAQRIFDTMKKRRGIK 149
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS-VGKKEEVYR 338
P T++++ T+Y G + L L+G V +K +
Sbjct: 150 PTVVTYTSLITVYANAGIYSSPNQ-------------------LCPLFGEMVAEKCQ--- 187
Query: 339 VWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
P V + ++I+S + G +E + IFE + N +++ Y
Sbjct: 188 ---------PNVKT--FTSLINSCRKGGHVEEAQTIFEAMKEYGVKPNVVTYNALINVYT 236
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETL-----AEGHIRE 435
+ G D A+ F +++ G +P S+ L A G +E
Sbjct: 237 ERGEQDGAQRVFLQMVQSGLQPTGVSFTVLMSSFKATGAFKE 278
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 135/321 (42%), Gaps = 5/321 (1%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V++ L K A+E+ D M G + LD + K + + A F S+
Sbjct: 55 VIQSLVKAGNVVLAMELLDKMIKTG--LEPDTLLCNVVLDGLGKANMMDEACKLFASMKS 112
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D Y L+ + R + A LL D+M ++G + Y ++ +Y K +
Sbjct: 113 MGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIES 172
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ +M +K + D Y+ N +++ G TE +FE MK V N +F+ M
Sbjct: 173 AMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMK-KSGVAVNTVSFNAML 231
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K G+V A + + +E+R + + ++ L++ G E Y+V RS
Sbjct: 232 DCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLT 291
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
Y MI + A+ G++ ++F + S + NL++ VK G + A
Sbjct: 292 PDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDI 351
Query: 410 FNSIIEEGGKPNSTSWETLAE 430
+ + ++G P++ + L +
Sbjct: 352 YFDMKKKGILPDAITATVLQQ 372
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 118/302 (39%), Gaps = 42/302 (13%)
Query: 178 VYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
Y ++ + V+A GN L L+DKM G +L NV++ K DE +
Sbjct: 51 TYKCVIQSLVKA---GNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLF 107
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ MK G D Y+Y I + S G E+ +F+ M+ ++ P+ ++ + +Y K
Sbjct: 108 ASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEME-ERGCTPSAPAYTNVIDIYCK 166
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G++E A L+++ + D + L++ G+ E ++ + V +
Sbjct: 167 AGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVS 226
Query: 355 YHAMISSLARIGDI-------EGME----------------------------KIFEEWL 379
++AM+ + G + + ME K+ +E
Sbjct: 227 FNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMR 286
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
S + D M+ + K GN KA F + + G N ++ L + ++ R
Sbjct: 287 SAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQ 346
Query: 440 EA 441
+A
Sbjct: 347 DA 348
>gi|242053311|ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
gi|241927776|gb|EES00921.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
Length = 642
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 154/356 (43%), Gaps = 44/356 (12%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+++ RR+ +V++WM ER +A+ + + A A + ++ D
Sbjct: 86 ILRHCGDTRRWDDLSKVFEWMQ---EREMTNAASYSSYFKYLGLSRDPARALQVYGAIKD 142
Query: 172 -TLKDR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE-YD 228
T+K V ++L V+ ++ L D+M +G + Y+ +++ MK+K+ Y
Sbjct: 143 QTMKVHVSVCNSVLGCLVKNGRLDSSFKLYDEMIREGLSPDPFTYSTLLSGCMKLKQGYT 202
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD------------- 275
+ ++++MK +G+++D+ Y L+ C S E+ E F+ MK +
Sbjct: 203 KAMELINDMKSRGLQMDIVIYGTLLAICASHNYCEEAEVYFQKMKDEGHCPNLFHYSSLL 262
Query: 276 ---------------------KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ PN +T+ +Y K G EKA+E L +E+
Sbjct: 263 NAYSENSDYEKAELLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKAKELLTELEASGFA 322
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY--HAMISSLARIGDIEGME 372
+D +PY L+ GK +E ++N + GV + GY MIS+L R G E +
Sbjct: 323 QDEMPYCILIDGLVKGGKIQEAKILFNEMKE--KGVKSDGYAFSIMISALHRGGHHEESK 380
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
++ +E+ S +SYD + N + Y + + + E P++ ++ TL
Sbjct: 381 QLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDELNISPDNITFNTL 436
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 152/339 (44%), Gaps = 24/339 (7%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD-----LIAKVHG 158
L +L +VK L ++ A+ +++W+ LS++ A++LD ++ ++ G
Sbjct: 141 LLTTDLVSLVKGLDDSGHWERAVFLFEWL-------VLSSNSGALKLDHHVIEILVRILG 193
Query: 159 ------VASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
VA+ + L D + D R Y +L+AY R A L ++M++ G + +
Sbjct: 194 RESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLV 253
Query: 213 PYNVMMTLYMKI-KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
YNV++ ++ K+ + + ++ ++ EM+ KG++ D ++ + LS+C +G + + F
Sbjct: 254 TYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAE 313
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
+K P T++ + ++ K G +A L+ +E D V Y+ L++ Y G
Sbjct: 314 LK-SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAG 372
Query: 332 KKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+E V + + V P + Y +I + + G + K+F +
Sbjct: 373 FSKEAAVVIEMMTQKGVMPNA--ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCT 430
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
N ++S K+ ++ + G PN +W T+
Sbjct: 431 YNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTI 469
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 8/244 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ AY RA A ++I+ M KG +++ Y ++ Y K + DE +
Sbjct: 357 DSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLF 416
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MKE G + +YN LS G + + +M + MK + PN T++T+ +
Sbjct: 417 YSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCF-PNRATWNTILALCGN 475
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNL 353
G + R ++S DR ++ L+S YG G + + +++ + R+ F
Sbjct: 476 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 535
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+A++++LAR GD E + + S +LM+ Y K GN+ E
Sbjct: 536 -YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIER----- 589
Query: 414 IEEG 417
IEEG
Sbjct: 590 IEEG 593
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 145/356 (40%), Gaps = 40/356 (11%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +L+A R + A+ +++ GY ++ YN ++ ++ K Y E S++
Sbjct: 287 DEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 346
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+E D +YN +++ G +++ V E+M K V PN T++T+ Y K
Sbjct: 347 KEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMM-TQKGVMPNAITYTTVIDAYGK 405
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV--------------- 339
G+ ++A + ++ + Y+ +LS+ G + E+ ++
Sbjct: 406 AGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRAT 465
Query: 340 WN-------------LYRSVFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWL 379
WN VF + + G ++ +IS+ R G K++ E
Sbjct: 466 WNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMT 525
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+ N +++ ++G++ E + + +G KP TS+ + + + + L
Sbjct: 526 RAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL 585
Query: 440 EALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKE 495
+G + SW ++ FK + GS+ AF L ++ GY+ +
Sbjct: 586 GIERIEEGINEGQIFPSWMLLRTLLLANFKC---RALAGSERAFT-LFKKHGYKPD 637
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 111/273 (40%), Gaps = 40/273 (14%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY---DEVESMV 234
Y ALLNA R + E +I M+ KG+ Y++M+ Y K Y + +E +
Sbjct: 535 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGI 594
Query: 235 SE--------------------------------MKEKGIRLDVYSYNIWLSSCGSQGST 262
+E K+ G + D+ +N LS
Sbjct: 595 NEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMY 654
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
++ EG+ + + D +NP+ T++++ MY++ G+ KAEE L+ +E D V Y+
Sbjct: 655 DQAEGILQSIHED-GLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT 713
Query: 323 LLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
++ + G +E R+ + R + P + Y+ +S +G +E + E
Sbjct: 714 VIKGFCRKGLMQEAVRMLSEMTERGIRPCI--FTYNTFVSGYTAMGMYGEIEDVIECMAK 771
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+ +++ Y + G + +A F + I
Sbjct: 772 NDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 804
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L++ YVR AE ++ + + YN ++ + + E M+
Sbjct: 672 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRML 731
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM E+GIR +++YN ++S + G ++E V E M + PN TF + Y +
Sbjct: 732 SEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDC-RPNELTFKMVVDGYCR 790
Query: 295 MGQVEKAEESLRRVES 310
G+ +A + + ++++
Sbjct: 791 AGKYSEAMDFVSKIKT 806
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 97/249 (38%), Gaps = 9/249 (3%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M+ G+ +N +++ Y + + M EM G V +YN L++ +G
Sbjct: 488 EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG 547
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
E V MK K P T++S M Y K G E R+E I P
Sbjct: 548 DWRSGENVISDMK-SKGFKPTETSYSLMLQCYAKGGNYLGIE----RIEEGINEGQIFPS 602
Query: 321 HYLLSLYGSVGKKEEVY----RVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
LL K R + L++ + +++M+S R + E I +
Sbjct: 603 WMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQ 662
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ D N +M YV+ G KAE ++ + KP+ S+ T+ +G R+
Sbjct: 663 SIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKG 722
Query: 437 RILEALSCL 445
+ EA+ L
Sbjct: 723 LMQEAVRML 731
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 146/363 (40%), Gaps = 58/363 (15%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ + N + G + ++ C +V L K + ++ V D M G +A + ++
Sbjct: 280 AVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVE 339
Query: 150 -----------LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELL 198
DL+ +V V + F VY AL+N+ + AELL
Sbjct: 340 GLRRKGKVVDAFDLVNRVKKVGAMPSLF-----------VYNALINSLCKDGKFDEAELL 388
Query: 199 IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGS 258
+M +KG + + Y++++ + + + D + +M GI++ VY YN ++
Sbjct: 389 FKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCK 448
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
G+ F+ M +DK + P +++++ + Y G++ +A R+ +TG+
Sbjct: 449 LGNLSAAVSFFDEM-IDKGLKPTVVSYTSLISGYCNKGKLHEA----FRLYHEMTGKGIA 503
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
P Y + +IS+L R + ++F+E
Sbjct: 504 PNTYTFT-------------------------------TLISALFRANRMTDAFRLFDEM 532
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
L + N+M+ + KEGN KA N ++++G P++ ++ L R+
Sbjct: 533 LEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRV 592
Query: 439 LEA 441
EA
Sbjct: 593 CEA 595
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 121/256 (47%), Gaps = 8/256 (3%)
Query: 179 YGALLNAYVR-ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ALL+ Y + R+R +A + +M +G + + Y V++ +K ++ V ++ M
Sbjct: 614 YSALLHGYCKEGRLR-DALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNM 672
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ +R D Y + GS +K G++++M +D+ PN T++T+ K G
Sbjct: 673 HDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIM-IDEGCTPNIVTYTTLINELCKAGL 731
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TNLGY 355
++KAE + + + + V Y L G E+ ++ N + G+ + Y
Sbjct: 732 MDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHN---DMLKGLLANTVSY 788
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ ++ ++G +E K+ +E + D + ++ + GN D A F+++++
Sbjct: 789 NILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLN 848
Query: 416 EGGKPNSTSWETLAEG 431
+G KP++ ++ L G
Sbjct: 849 KGLKPDTLAYNFLIYG 864
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 123/282 (43%), Gaps = 17/282 (6%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ L++A RA +A L D+M ++ + + YNVM+ + K + ++++M
Sbjct: 509 FTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMV 568
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KG+ D Y+Y +SS S G + + + + + N +S + Y K G++
Sbjct: 569 QKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH-FKLNEMCYSALLHGYCKEGRL 627
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG---VTNLGY 355
A R + R D V Y L+ G++ K+++ V+ L +++ + Y
Sbjct: 628 RDALGVCREMVKRGVDMDLVCYAVLID--GTI-KEQDTSAVFGLLKNMHDQRLRPDKVIY 684
Query: 356 HAMISSLARIGDIEGMEKIFEEW-LSVKSSYDPRIAN--LMMSWYVKEGNFDKAEAFFNS 412
+MI ++ G ++ K F W + + P I +++ K G DKAE +
Sbjct: 685 TSMIDGYSKAGSVK---KAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKE 741
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSC----LKGAFA 450
++ PN ++ + RE + +A+ LKG A
Sbjct: 742 MLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLA 783
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/291 (18%), Positives = 122/291 (41%), Gaps = 19/291 (6%)
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+V+ +K+ G ++ YN ++S G ++ E +F+ M +K + N T+S + +
Sbjct: 353 LVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMG-EKGLCANDVTYSILIDSF 411
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGV 350
+ G+++ A L ++ PY+ L++ + +G ++ + + + P V
Sbjct: 412 CRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTV 471
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y ++IS G + +++ E + + ++S + A F
Sbjct: 472 VS--YTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLF 529
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA---AEGAKSWRPKPVNVINF 467
+ ++E+ PN ++ + EGH +E ++A L ++RP ++ +
Sbjct: 530 DEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCST 589
Query: 468 FKACEEESDMG---------SKEAFVALLRQPGYRKEKDYMSLIGLTDEAV 509
+ CE + + ++ + ALL GY KE +G+ E V
Sbjct: 590 GRVCEAKKFIDDLHREHFKLNEMCYSALLH--GYCKEGRLRDALGVCREMV 638
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/386 (19%), Positives = 160/386 (41%), Gaps = 23/386 (5%)
Query: 53 SMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRV 112
++ + HS + + P +A+ NP L ++ D+ + S + R
Sbjct: 64 TVEKFHSIIKDHYRKNPTNPNDAVL-------NPSLTLPALSLDFSQIDASRISPSVVRC 116
Query: 113 VKE----LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLS 168
V E +R +L ++W +R + + S +DL KV D
Sbjct: 117 VIEKCGSVRHGIPLHQSLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQF----DLAWH 172
Query: 169 LPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
L D +K R V + L+ YVRA + A ++M D G + ++++++
Sbjct: 173 LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLS 232
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
+ + E +S +K++ DV Y + G + E VF+ MK+ + PN
Sbjct: 233 RKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKL-AGIEPNV 290
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
T+S + + GQ+ +A + + + + ++ L+ ++ G+ E+V +V+N
Sbjct: 291 YTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQ 350
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ + + Y+ +I + R ++E K+ + K + N + + K+ +
Sbjct: 351 MKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRD 410
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETL 428
+ A ++ ++E +PN+ ++ L
Sbjct: 411 VNGAHRMYSKMMEAKCEPNTVTYNIL 436
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 105/236 (44%), Gaps = 8/236 (3%)
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
PYN M+ L K++++D ++ MK + + + + ++ I + G + F M
Sbjct: 153 PYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GS 329
+ D P+ FS + + + + +A+ ++ R D + Y L+ + G
Sbjct: 213 E-DYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRFEP-DVIVYTNLVRGWCRAGE 270
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+ + E+V++ L + P V Y +I +L R G I +F + L + +
Sbjct: 271 ISEAEKVFKDMKL-AGIEPNV--YTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT 327
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
N +M +VK G +K +N + + G +P++ ++ L E H R+ + A+ L
Sbjct: 328 FNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVL 383
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 13/211 (6%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
V D + G + V+ L + + A +V+ M + G + AI +
Sbjct: 277 VFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSG------CAPNAITFNN 330
Query: 153 IAKVHGVASAEDFFLSLPDTLK------DRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+ +VH A + L + + +K D Y L+ + R NA +++ M K
Sbjct: 331 LMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKK 390
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
V++ +N + K ++ + M S+M E + +YNI + ST+ +
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVL 450
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ + M DK V PN T+ + TM+ MG
Sbjct: 451 KMKKDMD-DKEVEPNVNTYRLLVTMFCGMGH 480
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 7/278 (2%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELL---IDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
TL R LL+ R GN +L+ + M G A YNVM+ K + +
Sbjct: 250 TLPKARSCNFLLH---RLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLE 306
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ +M+E G+ DV +YN + G GS E++ +F MK D P+ T++ +
Sbjct: 307 NSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK-DVGCVPDIITYNGL 365
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
Y K ++ +A E +++ + V Y L+ + G + +++ R
Sbjct: 366 INCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGL 425
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
Y ++I + + G++ K+ + L + ++ K G +AE
Sbjct: 426 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEE 485
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
F S++++G PN + L G+I+ R+ +A+ LK
Sbjct: 486 VFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILK 523
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 146/352 (41%), Gaps = 39/352 (11%)
Query: 179 YGALLNAYVRARMRGNA-----ELLIDKMRDKGYAVHSL----------------PYNVM 217
Y +++ RARM +A E++++ D G+ V ++ ++V+
Sbjct: 166 YCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVL 225
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
++++++ +E S M+ S N L G+ + + F M +
Sbjct: 226 FSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM-IGAG 284
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
+ P+ T++ M K G +E + ++ D V Y+ L+ YG VG EEV
Sbjct: 285 IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVA 344
Query: 338 RVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS-YDPRIA--NLMM 394
++N + V + Y+ +I+ + E M + FE + +K++ P + + ++
Sbjct: 345 SLFNEMKDVGCVPDIITYNGLINCYCKF---EKMPRAFEYFSEMKNNGLKPNVVTYSTLI 401
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGA 454
+ KEG A F + G PN ++ +L + + + + EA L A G
Sbjct: 402 DAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA-GV 460
Query: 455 KSWRPKPVNVINFFK----ACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
K +N++ + C+ + ++E F ++L+ ++ Y +L+
Sbjct: 461 K------LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALV 506
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 127/303 (41%), Gaps = 19/303 (6%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKD-----RRVYGALLNAYVRARMRGNAELLIDKMRD 204
LD + K + AE+ F S+ LKD ++VY AL++ Y++A +A ++ +M +
Sbjct: 471 LDGLCKAGRMIEAEEVFRSM---LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 527
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
+ Y ++ + ++ +E + ++ EMK +GI + + + G +
Sbjct: 528 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD 587
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
F+ M+ D V T+ + K G VE A + R+ S + Y
Sbjct: 588 ALNFFQEMQ-DVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYT--- 643
Query: 325 SLYGSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
SL + K + L+ R + P +T + A+I + G+++ +
Sbjct: 644 SLIDGLCKNNCIESAKKLFDEMQCRGMTPDIT--AFTALIDGNLKHGNLQEALVLISRMT 701
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+ +D + ++S + + G +A FFN +IE+G P L + + ++
Sbjct: 702 ELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLD 761
Query: 440 EAL 442
EA+
Sbjct: 762 EAI 764
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 101/269 (37%), Gaps = 40/269 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L++ Y + L ++M+D G + YN ++ Y K ++
Sbjct: 323 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF 382
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEMK G++ PN T+ST+ + K
Sbjct: 383 SEMKNNGLK------------------------------------PNVVTYSTLIDAFCK 406
Query: 295 MGQVEKAEESLRRVESRITGR--DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G ++ A + V+ R TG + Y L+ G E +++ N +
Sbjct: 407 EGMMQGAIKLF--VDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNI 464
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y A++ L + G + E++F L S + ++ ++ Y+K + A
Sbjct: 465 VTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ 524
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ E KP+ + ++ GH +R++ E
Sbjct: 525 MTECNIKPDLILYGSIIWGHCSQRKLEET 553
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/347 (19%), Positives = 135/347 (38%), Gaps = 30/347 (8%)
Query: 77 FRKLSLMD-NPQLGSAS----VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDW 131
F SL+D N + G+ + +LND + G L ++ L K R A EV+
Sbjct: 430 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVF-- 487
Query: 132 MNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK------------DRRVY 179
R L + Q A VHG AE + D +K D +Y
Sbjct: 488 ------RSMLKDGISPNQQVYTALVHGYIKAE----RMEDAMKILKQMTECNIKPDLILY 537
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
G+++ + R +L++++M+ +G + + + ++ Y K + + + EM++
Sbjct: 538 GSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQD 597
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
G+ + +Y + + G E F M + + PN ++++ K +E
Sbjct: 598 VGVEATIVTYCVLIDGLCKAGIVELAVDYFCRM-LSLGLQPNVAVYTSLIDGLCKNNCIE 656
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
A++ ++ R D + L+ G +E + + + Y +++
Sbjct: 657 SAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLV 716
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
S ++ G++ K F E + + + ++ Y K G D+A
Sbjct: 717 SGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEA 763
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 155/349 (44%), Gaps = 37/349 (10%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE-----DFFLSL- 169
L +F R K ALE + M RG ++D LI HG++ A +FL+L
Sbjct: 1130 LCRFGRLKEALEFFKEMEGRG-----ISADVYTYNSLI---HGLSRAGLWKEVTWFLNLM 1181
Query: 170 ------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
PD + L++ + G A+ +++ MR KG L YN +M
Sbjct: 1182 VDRGFSPDAF----TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCL 1237
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNW 282
+ + ++ + + ++GI+L+V+SYNI ++ C Q E FE M+ K + P+
Sbjct: 1238 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFR-FFEEMR-PKGLKPST 1295
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
T++T+ + G+V A++ VE + G+ Y + L G + K + +L
Sbjct: 1296 VTYNTLIGALCQSGRVRTAQKLF--VEMQTCGQFLKLSTYCVLLDG-LCKNGHLEEAMDL 1352
Query: 343 YRSV-----FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
++S+ P + + ++ + R G +E K F+E D N++++
Sbjct: 1353 FQSIKKTEHKPNIEV--FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGL 1410
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+G +A + E+G P+S ++ + + ++E I EA+ L+
Sbjct: 1411 CNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLE 1459
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 135/353 (38%), Gaps = 39/353 (11%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK-DRRVYGALL 183
A++++D M +G A I ++ + K A + K D YG ++
Sbjct: 1035 AVQLFDEMTKKG--LLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMII 1092
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR 243
+A + M A + +M G + Y+ +M + E EM+ +GI
Sbjct: 1093 DALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 1152
Query: 244 LDVYSYN-----------------------------------IWLSSCGSQGSTEKMEGV 268
DVY+YN I + +G + + +
Sbjct: 1153 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 1212
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
ELM+ K P+ T++T+ +GQ+E A + + R + Y+ L++ Y
Sbjct: 1213 LELMR-HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 1271
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
K +E +R + R + + Y+ +I +L + G + +K+F E +
Sbjct: 1272 KDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 1331
Query: 389 IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+++ K G+ ++A F SI + KPN + L +G R ++ EA
Sbjct: 1332 TYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 1384
>gi|414881861|tpg|DAA58992.1| TPA: hypothetical protein ZEAMMB73_732512 [Zea mays]
Length = 642
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 153/361 (42%), Gaps = 54/361 (14%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+++ RR+ +V++WM R S S K G++ L +
Sbjct: 86 ILRHCGDIRRWDDLSKVFEWMQEREMTNAASYSS-------YFKYLGLSRDPARVLRVYG 138
Query: 172 TLKDR--RVYGALLNAYVRARMRGNAEL-----LIDKMRDKGYAVHSLPYNVMMTLYMKI 224
+KDR RV+ ++ N+ + ++ N L L D+M +G + Y+ ++ MK+
Sbjct: 139 AIKDRTLRVHVSVCNSVLGCLVK-NGRLDSSFKLYDEMIREGLSPDPFTYSTLLAGCMKL 197
Query: 225 KE-YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD-------- 275
K+ Y + +++EMK +G+++D+ Y L+ C S E+ E F+ MK +
Sbjct: 198 KQGYTKAMGLINEMKSRGLQMDIVIYGTLLAICASHNYCEEAEVYFQKMKDEGHSPNLFH 257
Query: 276 --------------------------KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
+ PN +T+ +Y K G EKA+ L +E
Sbjct: 258 YSSLLNAYSENSDYGKAELLMKDLRSSGLTPNKVMLTTLLKVYSKGGLFEKAKGLLTELE 317
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY--HAMISSLARIGD 367
+ +D +PY L+ GK +E ++N + GV + GY MIS+L R G
Sbjct: 318 ASGFAQDEMPYCILIDGLVKGGKIQEANILFNEMKE--KGVKSDGYAFSIMISALHRGGH 375
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
+ +++ +E+ S +SYD + N + Y + + + E P++ ++ T
Sbjct: 376 HQESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDESNISPDNITFNT 435
Query: 428 L 428
L
Sbjct: 436 L 436
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 86/198 (43%), Gaps = 34/198 (17%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
LL Y + + A+ L+ ++ G+A +PY +++ +K + E + +EMKEK
Sbjct: 295 TLLKVYSKGGLFEKAKGLLTELEASGFAQDEMPYCILIDGLVKGGKIQEANILFNEMKEK 354
Query: 241 GIRLDVYSYNIWLSSCGSQG--------------------------------STEKMEGV 268
G++ D Y+++I +S+ G ST ME V
Sbjct: 355 GVKSDGYAFSIMISALHRGGHHQESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESV 414
Query: 269 FELM-KVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
++ K+D++ ++P+ TF+T+ + A +++ + ++ + +++
Sbjct: 415 MRMLKKMDESNISPDNITFNTLIRYFCNAKVCHLAYKTVEDMHAKGHQLNEELCSHVMVQ 474
Query: 327 YGSVGKKEEVYRVWNLYR 344
G G E + V+N+ R
Sbjct: 475 LGKAGFPSEAFSVYNMLR 492
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 119/256 (46%), Gaps = 5/256 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ R YG L+N + + AE+L+ M+ +G ++ + +N M+ Y + D+ +
Sbjct: 107 NERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIK 166
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M++ G+ LD+Y+YN ++ + + +M ++ V PN+ T++T+ +++ K
Sbjct: 167 AAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM-IEMGVVPNYVTYTTLISIHCK 225
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG--KKEEVYRVWNLYRSVFPGVTN 352
G + +A R + + V Y+ ++ Y G ++ E +R + P V
Sbjct: 226 DGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYT 285
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y +++ G ++ K+FEE + + ++S KEG + A ++
Sbjct: 286 --YASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDD 343
Query: 413 IIEEGGKPNSTSWETL 428
+++ G P+ + + L
Sbjct: 344 MLKAGLIPDDSLYSAL 359
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 121/284 (42%), Gaps = 47/284 (16%)
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
+A L+D M G ++++L YN ++ Y++ K+ V+ ++ M+ +GI V
Sbjct: 32 DARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGD----- 86
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+CG G + ++ V V PN T+ + + K+GQ+E AE L ++ +
Sbjct: 87 GTCG--GPPKVLDEC-----VGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGV 139
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWN------------LYRSVFPGVTNLG------- 354
G +++ ++ ++ Y G ++ ++ Y ++ G+ +
Sbjct: 140 GLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKT 199
Query: 355 ----------------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
Y +IS + GD+ ++F E ++ N+M+ Y
Sbjct: 200 LLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYA 259
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
K+G+ +AE F + ++G P+ ++ +L GH ++ AL
Sbjct: 260 KKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVAL 303
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/257 (17%), Positives = 106/257 (41%), Gaps = 23/257 (8%)
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+V L +V++ K D+ ++ +M G+ L+ YN L Q +++
Sbjct: 11 SVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQE 70
Query: 268 VFELMK-----------------------VDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
+ E+M+ V V PN T+ + + K+GQ+E AE
Sbjct: 71 ILEIMENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEML 130
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
L ++ + G +++ ++ ++ Y G ++ ++ + + Y+ + L R
Sbjct: 131 LADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCR 190
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
+ ++ + + + + + ++S + K+G+ +A F + E+G P+ +
Sbjct: 191 VNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVT 250
Query: 425 WETLAEGHIRERRILEA 441
+ + G+ ++ I EA
Sbjct: 251 YNVMIHGYAKKGSIREA 267
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 1/266 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D+ Y LL+ Y ++R A ++ +M G + + YN +++ Y + +E
Sbjct: 136 VPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAME 195
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ ++M E+GI+LDV++Y LS G E VFE M+ PN TF+ + M+
Sbjct: 196 LKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRT-AGCKPNICTFNALIKMH 254
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G+ + + ++ D V ++ LL+++G G EV V+ + V
Sbjct: 255 GNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPER 314
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +IS+ +R G + +++ L + D N +++ + G ++++E
Sbjct: 315 DTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAE 374
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRI 438
+ + KPN + +L + + I
Sbjct: 375 MQDGMCKPNELTHCSLLHAYANGKEI 400
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A L++ + G+ Y ++T + Y E + +M+E+G + + +YN+ L+
Sbjct: 17 AASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILN 76
Query: 255 SCGSQGST-EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
G G K+ G+FE MK + + P+ T++T+ T + E+A ++S
Sbjct: 77 VYGKMGMPWNKITGLFEGMK-NAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGF 135
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
D+V Y+ LL +YG + +E V + + Y+++IS+ AR G +E +
Sbjct: 136 VPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAME 195
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ + + D M+S +V+ G + A F + G KPN ++ L + H
Sbjct: 196 LKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMH 254
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 135/325 (41%), Gaps = 17/325 (5%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQL----DLIAKVHGVASAEDFFLSLPDTLKDRRVYG 180
A+ V++ M G + + +A I++ A++ V +PD + +
Sbjct: 228 AMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIV----TWN 283
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
LL + + M + +M+ G+ YN +++ Y + +D+ +M M +
Sbjct: 284 TLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDT 343
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
GI D+ +YN L++ G E+ E + M+ D PN T ++ Y ++ +
Sbjct: 344 GITPDLSTYNAVLAALARGGLWEQSEKILAEMQ-DGMCKPNELTHCSLLHAYANGKEIGR 402
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVF-PGVTNLGYHAM 358
+ S + V L+ + E R + L R F P ++ L +AM
Sbjct: 403 MLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTL--NAM 460
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEE 416
I+ R + +I +S + P +A N +M + + NF+++E I+ +
Sbjct: 461 IAIYGRRQMVTKTNEILN--FMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAK 518
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
G KP+ S+ T+ + R R+ EA
Sbjct: 519 GIKPDIISYNTVIFAYCRNGRMKEA 543
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D A++ Y R +M +++ M++ G+ YN +M ++ + + ++ E ++
Sbjct: 453 DLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVL 512
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KGI+ D+ SYN + + G ++ +F M+ + + P+ T++T Y
Sbjct: 513 KEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMR-ESGLIPDVITYNTFVASYAA 571
Query: 295 MGQVEKA 301
E+A
Sbjct: 572 DSMFEEA 578
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 144/337 (42%), Gaps = 6/337 (1%)
Query: 101 GRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVA 160
G T + ++ K + A++V++ M G + L +A I V
Sbjct: 217 GYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKR 276
Query: 161 SAEDFFLSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
E F L + ++ DR Y +LL R + A L ++M D+G YN ++
Sbjct: 277 VVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLD 336
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
K + D ++ EM K I +V +Y+ G E ++ MK +
Sbjct: 337 AVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKF-LGIG 395
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
+ +++T+ ++Y K+G+ E A + + + S +D V Y+ LL YG GK EV RV
Sbjct: 396 LDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRV 455
Query: 340 WNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
+ + VFP + L Y +I ++ E ++F E+ D + + +++
Sbjct: 456 FKEMKKDRVFPNL--LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINAL 513
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
K G D A + + +EG +PN ++ ++ + R
Sbjct: 514 CKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGR 550
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 128/279 (45%), Gaps = 3/279 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEM 237
+ AL++AY ++ A + + M+ G + + YN ++ K E+ V + EM
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G++ D +YN L+ C G E +F M +D+ ++ + T++T+ K GQ
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEM-IDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
++ A E + + + + V Y + Y G+ E+ ++N + + G+ + Y+
Sbjct: 344 MDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNT 403
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++S A++G E K+ +E S D N ++ Y K+G F++ F + ++
Sbjct: 404 LLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDR 463
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS 456
PN ++ TL + + + EA+ + F G K+
Sbjct: 464 VFPNLLTYSTLIDVYSKGSLYEEAMEVFR-EFKQAGLKA 501
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 10/259 (3%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
++++M + G + Y ++ + K DE ++ M G R + SY I L
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKG-- 436
Query: 258 SQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
S E+ ELM + + PN TF+T+ K G VE+A E L+++
Sbjct: 437 -LCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 495
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
D + Y ++ G G +E + N+ + Y ++ S+L+ G I + ++F
Sbjct: 496 DLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMF 555
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL-----AE 430
E D + N ++S K G D+A F ++ G PN +++ L +E
Sbjct: 556 ENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASE 615
Query: 431 GHIRERRILEALSCLKGAF 449
G ++E + + C KGA
Sbjct: 616 GFVKEAQEILTELCSKGAL 634
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 123/266 (46%), Gaps = 5/266 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R+Y +++ + A ++++M G + + + YN ++ ++E E ++
Sbjct: 286 DVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLL 345
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM +K LD ++NI + G +++ V E M ++ P+ T++T+ + K
Sbjct: 346 AEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQM-LEHGCMPDVITYTTVINGFCK 404
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G +++A LR + + + V Y +L S + + + + + + P
Sbjct: 405 EGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPP--NP 462
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ ++ +I+ L + G +E ++ ++ L S D + ++ K GN D+A N
Sbjct: 463 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNV 522
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRI 438
++++G PN+ + ++A E RI
Sbjct: 523 MVKKGMSPNTIIYSSIASALSGEGRI 548
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 136/327 (41%), Gaps = 26/327 (7%)
Query: 197 LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
LL D + G + YN ++ + + V+ ++ EM G ++ +++ +
Sbjct: 203 LLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHL 262
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
G E++ V M + P+ ++T+ K ++E A L R+ S +
Sbjct: 263 CRNGLFERVHEVHAQMA-EHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPN 321
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
V Y+ LL S + EE + ++ P + ++ ++ ++ L + G ++ + ++
Sbjct: 322 VVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCP-LDDVTFNILVDFLCQNGLVDRVIEVL 380
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
E+ L D +++ + KEG D+A S+ G +PN+ S+ + +G
Sbjct: 381 EQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSA 440
Query: 436 RRILEALSCLKGAFAAEGAKSWRPKPV---NVINFFKACEEESDMGSKEAFVALLRQ--- 489
R ++A L +G P PV +INF C++ G E + LL+Q
Sbjct: 441 ERWVDAEE-LMSQMIQQGCP---PNPVTFNTLINFL--CKK----GLVEQAIELLKQMLV 490
Query: 490 ----P---GYRKEKDYMSLIGLTDEAV 509
P Y D + G TDEA+
Sbjct: 491 NGCSPDLISYSTVIDGLGKAGNTDEAL 517
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ +A A L++ M KG + +++ Y+ + + ++V M ++
Sbjct: 500 YSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQ 559
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ +R D YN +SS +G T++ M V PN +T++ + G V
Sbjct: 560 DTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYM-VSSGCVPNESTYTILIRGLASEGFV 618
Query: 299 EKAEESLRRVESRITGRDRVPYHY 322
++A+E L + S+ R + H+
Sbjct: 619 KEAQEILTELCSKGALRKHLMKHF 642
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 1/233 (0%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN+M+ K + + S+ ++MKE G D+ +YN + G G ++ +FE MK
Sbjct: 258 YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 317
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D +P+ T++ + + K ++ KA E L +++ + V Y + + G
Sbjct: 318 -DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 376
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+E + + R V Y ++I + + G++ K+ EE L + +
Sbjct: 377 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 436
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ +EG +AE F +++ G PN ++ L G I+ + + A LK
Sbjct: 437 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 489
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 121/301 (40%), Gaps = 9/301 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP--YNVMMTLYMKIKEYDEVESMVS 235
V+ AL +A + M A KMR + V P N ++ K+ D
Sbjct: 187 VFDALFSALIELGMLEEASECFLKMRK--FRVFPKPRSCNALLHRLSKVGRGDLSRKFFK 244
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+M GI+ V++YNI + +G E +F MK + P+ T++++ + K+
Sbjct: 245 DMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMK-EAGFTPDIVTYNSLIDGHGKL 303
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNL 353
G +++ +++ D + Y+ L++ + + + + + ++ + P V
Sbjct: 304 GLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT- 362
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y I + + G ++ K F + V + + ++ K GN +A I
Sbjct: 363 -YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 421
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
++ G K N ++ L +G E R+ EA + A A + V F KA E
Sbjct: 422 LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEM 481
Query: 474 E 474
E
Sbjct: 482 E 482
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 128/304 (42%), Gaps = 9/304 (2%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
I +D + K + A F + + D Y +L++ + + + + ++M+D
Sbjct: 260 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 319
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ YN ++ + K + + + EMK G++ +V +Y+ ++ + +G ++
Sbjct: 320 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 379
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
F M+ A+ PN T++++ K G + +A + + + + V Y LL
Sbjct: 380 IKFFVDMR-RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 438
Query: 326 LY---GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
G + + EEV+R L V P Y A++ + ++E + I +E
Sbjct: 439 GLCEEGRMKEAEEVFRAM-LNAGVAPNQET--YTALVHGFIKAKEMEYAKDILKEMKEKC 495
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
D + ++ E ++A+ I E G N+ + TL + + + + EAL
Sbjct: 496 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 555
Query: 443 SCLK 446
+ L+
Sbjct: 556 TLLE 559
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY AL++ + A+ L D+M DKG + Y ++ MK E ++ M
Sbjct: 607 VYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 666
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G+ LD+++Y + G +K + + M + K V P+ + + Y +G+
Sbjct: 667 IEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEM-IGKGVLPDEVVYMCLIKKYYALGK 725
Query: 298 VEKAEESLRRVESR--ITG 314
V++A E + R ITG
Sbjct: 726 VDEALELQNEMAKRGMITG 744
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 46/270 (17%), Positives = 108/270 (40%), Gaps = 5/270 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
++ Y AL++ +++A+ A+ ++ +M++K L Y ++ +E + ++
Sbjct: 464 NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLI 523
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+KE GI + Y + + G + + E M +D + T+ + K
Sbjct: 524 GEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM-LDLGLIATEVTYCALIDGLCK 582
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G V++A R+ + Y L+ E ++++ L + + P
Sbjct: 583 SGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMP--DK 640
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y A+I + G+++ + + + + D ++ G KA +
Sbjct: 641 IAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDE 700
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+I +G P+ + L + + ++ EAL
Sbjct: 701 MIGKGVLPDEVVYMCLIKKYYALGKVDEAL 730
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL++ Y +A A + ++M KG + + Y + K E D ++
Sbjct: 416 DEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELL 475
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM KG++ +VY+YN ++ G+ E+ + E M + P+ T++T+ Y K
Sbjct: 476 HEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDL-AGFYPDTITYTTLMDAYCK 534
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV--WNLYRSVFPGVTN 352
MG++ KA E LR + ++ V ++ L++ + G E+ R+ W L + + P T
Sbjct: 535 MGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATT 594
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+++++ ++ +I++ D N+++ + K N +A
Sbjct: 595 --FNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKE 652
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
++E+G + +++ L G + ++ +EA
Sbjct: 653 MVEKGYSVTAATYDALIRGFYKRKKFVEA 681
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 138/322 (42%), Gaps = 13/322 (4%)
Query: 119 FRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDR 176
F K A++V++ G + + + I L + ++ V A + + + D D
Sbjct: 220 FEGIKIAVKVFEEFPELGVCWNTVSCN--IVLHCLCQLGKVREAHNLLVQMTDRGNFPDV 277
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
YG +++ Y R L+D+++ KG YN ++ L K E E E ++
Sbjct: 278 VSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRG 337
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M++ G+ D Y +S G+ +F+ M+ K V P+ T++++ K G
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIV-PDIVTYTSVIHGICKSG 396
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
++ +A E + + D V Y L+ Y G+ +E + V N + + + P V
Sbjct: 397 KMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVT-- 454
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNS 412
Y A+ L + G+I+ ++ E + P + N +++ K GN ++
Sbjct: 455 YTALADGLCKNGEIDVANELLHE--MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEE 512
Query: 413 IIEEGGKPNSTSWETLAEGHIR 434
+ G P++ ++ TL + + +
Sbjct: 513 MDLAGFYPDTITYTTLMDAYCK 534
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y L+ + +AR A L +M +KGY+V + Y+ ++ + K K++ E
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEAR 682
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
+ EM++ G+ + Y+I++ +G+ E
Sbjct: 683 KLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWE 714
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 128/291 (43%), Gaps = 40/291 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y AL++ A D+M ++G YN+++ K +E E M+ EM
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+EKG+ DV +YNI ++ G+ +K +F+ M V+K + P T++++ ++ K +
Sbjct: 384 REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM-VEKNIRPTVETYTSLIDVFGKRNR 442
Query: 298 VEKAEESLRR------------VESRITGR-----------------------DRVPYHY 322
+ +AEE ++ + I G D V ++
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNT 502
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
L+ Y K EE ++ + + ++ Y+ +IS ++ GD++ ++F+E LS+
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSL- 561
Query: 383 SSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+DP + N ++ Y K G D AE + +G P+ +++ + E
Sbjct: 562 -GFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLS------LPDTLKDR 176
K AL ++D M + R + + I D+ K + ++ AE+ F LPD +
Sbjct: 409 KKALSLFDEMVEKNIRPTVETYTSLI--DVFGKRNRMSEAEEKFKKSIKEGMLPDII--- 463
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
++ AL++ + A L+ +M + + +N +M Y + ++ +E + ++ E
Sbjct: 464 -MFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDE 522
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
MKE+GI+ D SYN +S +G + VF+ M + +P T++ + Y K+G
Sbjct: 523 MKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEM-LSLGFDPTLLTYNALIQGYSKIG 581
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLL 324
+ + AEE LR ++S+ D Y Y++
Sbjct: 582 EADHAEELLREMQSKGITPDDSTYLYVI 609
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 123/271 (45%), Gaps = 15/271 (5%)
Query: 178 VYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
Y ++N Y +RG E + M+DK YN ++ K + +E ++
Sbjct: 254 TYNTVINGYC---LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVL 310
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++ E G+ + +YN + C ++G +K + M +++ + + T++ +
Sbjct: 311 CKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEM-MNRGIVASVFTYNLLIHALFL 369
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
++E+AE+ ++ + + D V Y+ ++ Y G ++ +++ + +++ P V
Sbjct: 370 EKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVET 429
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFF 410
Y ++I + + E+ F++ S+K P I N ++ + GN D+A
Sbjct: 430 --YTSLIDVFGKRNRMSEAEEKFKK--SIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLL 485
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ P+ ++ TL +G+ RER++ EA
Sbjct: 486 KEMDNAKVVPDEVTFNTLMQGYCRERKVEEA 516
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 111/273 (40%), Gaps = 9/273 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ ++N R A+ I M G + + YN ++ Y +++ + M
Sbjct: 219 TFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM 278
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K+K ++ D Y+YN ++S + E+ GV + ++ + PN T++ + G
Sbjct: 279 KDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKL-LESGLVPNAVTYNALIDGCCNKGD 337
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGY 355
++KA + +R Y+ L+ + EE + R V P V + Y
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDV--VTY 395
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSI 413
+ I+ R G+ + +F+E V+ + P + ++ + K +AE F
Sbjct: 396 NIQINGYCRCGNAKKALSLFDEM--VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKS 453
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
I+EG P+ + L +GH I A LK
Sbjct: 454 IKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLK 486
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
+L ++++++ Y + ++ DE ++ MKE I + N LS + V+E
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M V + + TF+ M + + G+ +KA++ + +E + V Y+ +++ Y
Sbjct: 207 EM-VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
GK E +++ + Y++ IS L + IE + + L +
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N ++ +G+ DKA A+ + ++ G + ++ L E+RI EA
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEA 376
>gi|297802950|ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315195|gb|EFH45618.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 906
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 124/281 (44%), Gaps = 14/281 (4%)
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
G L+ Y + AE MR K V Y+ M+T+Y +++ Y++ E +++ MK+
Sbjct: 251 GMLMGLYQKNWNVDEAEFAFSHMR-KFEIVCESAYSSMITIYTRLRLYEKAEEVINLMKQ 309
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+RL + ++ + L++ QG E+ E V M+ PN ++T+ T Y K+ ++E
Sbjct: 310 DRVRLKLENWLVMLNAYSQQGKMEQAESVLISMEA-AGFAPNIIAYNTLITGYGKVSKME 368
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVF-PGVTNLGYHA 357
A+ R+ D Y ++ +G EE + L R + P +NL
Sbjct: 369 AAKSLFHRLSDIGLEPDETSYRSMIEGWGRADNYEEANHYYQELKRCGYKPNSSNL--FT 426
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I+ A+ GD +G K E+ S+ Y P I +++ Y K G D
Sbjct: 427 LINLQAKYGDRDGAIKTIEDMTSIGCQY-PSILGIILQAYEKVGKIDVVPYLLKGSFHNH 485
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWR 458
+ N TS+ L +I+ + + L+ L+ K WR
Sbjct: 486 IRLNQTSFSILVMAYIKHGMVDDCLALLR-------EKKWR 519
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 6/194 (3%)
Query: 137 ERFRLSASDAAIQLDLIAKVHGVASA-----EDFFLSLPDTLKDRRVYGALLNAYVRARM 191
E R + + +++ V+G A E F L+ + D Y ++ AY + +
Sbjct: 691 EMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKD 750
Query: 192 RGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
N I M+ G++V YN ++ Y K K+ ++ S++ MK+ D Y+YNI
Sbjct: 751 FTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 810
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
++ G QG +++ GV + +K + + P+ +++T+ Y G VE+A ++ + +
Sbjct: 811 MINIYGEQGWIDEVAGVLKELK-ESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGK 869
Query: 312 ITGRDRVPYHYLLS 325
D+V Y L++
Sbjct: 870 NITPDKVTYTNLVT 883
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ +Y ++N RA ++M G+ +++ +NV++ +Y K K + +V +
Sbjct: 665 DQEMYNCVINCCARALPLDELSRTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF 724
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
K G+ +DV SYN +++ G M + M+ D + + ++T+ Y K
Sbjct: 725 LLAKRHGV-VDVISYNTIIAAYGKNKDFTNMSSAIKNMQFD-GFSVSLEAYNTLLDAYGK 782
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
Q+EK L+R++ +G D Y+ ++++YG G +EV V + G
Sbjct: 783 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAGVLKELKESGLGPDLCS 842
Query: 355 YHAMISSLARIGDIE 369
Y+ +I + G +E
Sbjct: 843 YNTLIKAYGIGGMVE 857
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 150/352 (42%), Gaps = 17/352 (4%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGAL 182
A+++Y+ E L + I D+ + AE +L+L + + DR + +
Sbjct: 544 AVKLYNHTMESDEEINLHITSTMI--DIYTVMGEFGEAEKLYLNLKSSGVVLDRIGFSIV 601
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSL-PYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
+ YV+A A +++ M ++ V + + M+ +Y K D+++ + +++ G
Sbjct: 602 VRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIQKSG 661
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
I D YN ++ C +++ FE M + PN TF+ + +Y K +K
Sbjct: 662 IHWDQEMYNCVINCCARALPLDELSRTFEEM-IRYGFTPNTVTFNVLLDVYGKAKLFKKV 720
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV-FPG--VTNLGYHAM 358
E L + R D + Y+ +++ YG K ++ + + +++ F G V+ Y+ +
Sbjct: 721 NE-LFLLAKRHGVVDVISYNTIIAAYG---KNKDFTNMSSAIKNMQFDGFSVSLEAYNTL 776
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ + + +E I + S D N+M++ Y ++G D+ + E G
Sbjct: 777 LDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAGVLKELKESGL 836
Query: 419 KPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA 470
P+ S+ TL + + + EA+ +K K+ P V N A
Sbjct: 837 GPDLCSYNTLIKAYGIGGMVEEAVGLVKEM----RGKNITPDKVTYTNLVTA 884
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 53/300 (17%), Positives = 113/300 (37%), Gaps = 35/300 (11%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+LNAY + AE ++ M G+A + + YN ++T Y K+ + + +S+ + +
Sbjct: 321 VMLNAYSQQGKMEQAESVLISMEAAGFAPNIIAYNTLITGYGKVSKMEAAKSLFHRLSDI 380
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G+ D SY + G + E+ ++ +K PN + T+ + K G +
Sbjct: 381 GLEPDETSYRSMIEGWGRADNYEEANHYYQELK-RCGYKPNSSNLFTLINLQAKYGDRDG 439
Query: 301 AEESLRRVES-----------------RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
A +++ + S ++ D VPY S + + + + + +
Sbjct: 440 AIKTIEDMTSIGCQYPSILGIILQAYEKVGKIDVVPYLLKGSFHNHIRLNQTSFSILVMA 499
Query: 344 RSVFPGVTNL-----------------GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
V + YH +I S G + K++ + +
Sbjct: 500 YIKHGMVDDCLALLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKLYNHTMESDEEIN 559
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
I + M+ Y G F +AE + ++ G + + + +++ + EA S L+
Sbjct: 560 LHITSTMIDIYTVMGEFGEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLE 619
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 144/337 (42%), Gaps = 6/337 (1%)
Query: 101 GRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVA 160
G T + ++ K + A++V++ M G + L +A I V
Sbjct: 217 GYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKR 276
Query: 161 SAEDFFLSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
E F L + ++ DR Y +LL R + A L ++M D+G YN ++
Sbjct: 277 VVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLD 336
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
K + D ++ EM K I +V +Y+ G E ++ MK +
Sbjct: 337 AVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKF-LGIG 395
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
+ +++T+ ++Y K+G+ E A + + + S +D V Y+ LL YG GK EV RV
Sbjct: 396 LDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRV 455
Query: 340 WNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
+ + VFP + L Y +I ++ E ++F E+ D + + +++
Sbjct: 456 FKEMKKDRVFPNL--LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINAL 513
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
K G D A + + +EG +PN ++ ++ + R
Sbjct: 514 CKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGR 550
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 128/279 (45%), Gaps = 3/279 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEM 237
+ AL++AY ++ A + + M+ G + + YN ++ K E+ V + EM
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G++ D +YN L+ C G E +F M +D+ ++ + T++T+ K GQ
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEM-IDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
++ A E + + + + V Y + Y G+ E+ ++N + + G+ + Y+
Sbjct: 344 MDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNT 403
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++S A++G E K+ +E S D N ++ Y K+G F++ F + ++
Sbjct: 404 LLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDR 463
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS 456
PN ++ TL + + + EA+ + F G K+
Sbjct: 464 VFPNLLTYSTLIDVYSKGSLYEEAMEVFR-EFKQAGLKA 501
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 166/420 (39%), Gaps = 78/420 (18%)
Query: 34 LHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFERRP-MIKWNAIFRKLSLMDNPQLGSA- 91
L Q+S + H + L V+K S ++P I +N + L+++ +L +A
Sbjct: 28 LRQKSKLDHALRLLEVMKES------------GKKPDEILYNCLVN--GLVNSGRLEAAE 73
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ-- 149
+L+D ++ S ++KE R + +++ M ++GE +A IQ
Sbjct: 74 KILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGY 133
Query: 150 ---------LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
L+L ++ GV A KD Y + Y + + + E L+D
Sbjct: 134 GRKGLFKEALELYDEMDGVGCA-----------KDVHTYNIAIAMYGKRGLLEDMERLLD 182
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M KG + YN ++ +Y K + + ++ EM E G R ++++YNI LSS +
Sbjct: 183 EMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQ 242
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
S + +FE +K K V PN T+S M
Sbjct: 243 SVAEATQLFENLK-SKGVVPNIVTYSAM-------------------------------- 269
Query: 321 HYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
LSLYG G E ++W+ + P + + Y +I S G + F++
Sbjct: 270 ---LSLYGRHGLYTEAAKLWDEMIEAGCIPCI--IAYSGLIESYGHHGMYQEALACFQDM 324
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
D +I +M Y K G +AE + + +EG P+ ++ L R+
Sbjct: 325 RKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 108/245 (44%), Gaps = 2/245 (0%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
L +M G + Y V++ Y++ K + D ++ MKE G + D YN ++
Sbjct: 4 LFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGL 63
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
+ G E E + + MK DK V+ N T++ + Y G+++ + + ++ + +
Sbjct: 64 VNSGRLEAAEKILDDMKRDK-VSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPN 122
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y+ L+ YG G +E +++ V Y+ I+ + G +E ME++ +
Sbjct: 123 SWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLD 182
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
E + D N ++ Y K+ F KA + E G +PN ++ + +E+
Sbjct: 183 EMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQ 242
Query: 437 RILEA 441
+ EA
Sbjct: 243 SVAEA 247
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 119/267 (44%), Gaps = 6/267 (2%)
Query: 178 VYGALLNAYVRARMRGNAEL-LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y +++ Y+R + + + L L++ M++ G + YN ++ + + E ++ +
Sbjct: 19 TYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDD 78
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
MK + ++ +Y + + G + +F+ MK DK +PN T++ + Y + G
Sbjct: 79 MKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMK-DKGESPNSWTYNALIQGYGRKG 137
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++A E ++ +D Y+ +++YG G E++ R+ + + + Y+
Sbjct: 138 LFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYN 197
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSII 414
++ A+ +I E ++ Y P I N+M+S KE + +A F ++
Sbjct: 198 TLLDVYAKKSYFVKAHEILREM--TEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLK 255
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
+G PN ++ + + R EA
Sbjct: 256 SKGVVPNIVTYSAMLSLYGRHGLYTEA 282
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +++ L G +E EKI ++ K S + ++ Y G F +
Sbjct: 56 YNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMK 115
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEAL 442
++G PNS ++ L +G+ R+ EAL
Sbjct: 116 DKGESPNSWTYNALIQGYGRKGLFKEAL 143
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 125/271 (46%), Gaps = 5/271 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ + +A L+++M+ KG + + Y +++ + K +E +++
Sbjct: 13 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 72
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM KG+ L+ YN +S+ + +F M K P+ TF+++ K
Sbjct: 73 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS-SKGCKPDIFTFNSLIFGLCK 131
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+ + E+A + + + + Y+ L+ + G +E ++ N L+R P + +
Sbjct: 132 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC-P-LDD 189
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+ +I +L R G+IE +FE+ +S + + N++++ + GN A F
Sbjct: 190 ITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 249
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+I G P+ ++ +L G + R EAL+
Sbjct: 250 MIHRGLTPDIVTYNSLINGLCKTGRAQEALN 280
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 127/295 (43%), Gaps = 40/295 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++ + + A ++D+M KG A++++ YN +++ K ++ + +M +M
Sbjct: 51 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 110
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG + D++++N + E+ G+++ M ++ + N T++T+ +++ G
Sbjct: 111 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI-ANTITYNTLIHAFLRRGA 169
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE---------------------- 335
+++A + + + R D + Y+ L+ G E+
Sbjct: 170 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 229
Query: 336 ----VYRVWN-----------LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
+ R N ++R + P + Y+++I+ L + G + +F++
Sbjct: 230 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVT--YNSLINGLCKTGRAQEALNLFDKLQV 287
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
D N ++SW+ KEG FD A + ++ G PN +W L I+E
Sbjct: 288 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 342
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 175 DRRVYGALLNAYVRARMRGNAE---LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D Y L+ A RA GN E L + M KG +++ N+++ +
Sbjct: 188 DDITYNGLIKALCRA---GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ +M +G+ D+ +YN ++ G ++ +F+ ++V+ + P+ T++T+ +
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE-GICPDAITYNTLISW 303
Query: 292 YIKMGQVEKAEESLRR-VESRITGRDRVPYHYLLSLYGSVGKKE 334
+ K G + A L R V+S + V ++ L+S + G +E
Sbjct: 304 HCKEGMFDDAHLLLSRGVDSGFI-PNEVTWYILVSNFIKEGDQE 346
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 125/266 (46%), Gaps = 5/266 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++ + + +A L +M KG + + + Y+ +++ + + + + + ++M
Sbjct: 199 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKM 258
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ I+ DVY++NI + G ++ + VF +M + + + PN T+ ++ Y + +
Sbjct: 259 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM-MKQGIKPNVVTYCSLMDGYCLVKE 317
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
V KA+ L + R D Y+ L+ + + K +E ++ ++ + P V Y
Sbjct: 318 VNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT--Y 375
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++I L ++G I K+ +E D + ++ K DKA A + +
Sbjct: 376 NSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD 435
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
+G +PN ++ L +G + R+ +A
Sbjct: 436 QGIRPNMYTYTILIDGLCKGGRLEDA 461
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/365 (18%), Positives = 152/365 (41%), Gaps = 31/365 (8%)
Query: 87 QLGSASVLNDWEKGGRSLTKWELCR----------------VVKELRKFRRYKHALEVYD 130
Q+G ++++ K G + +L R ++ + K + A ++Y
Sbjct: 162 QVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYS 221
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVR 188
M ++G + A I V + A D F + L + D + L++ + +
Sbjct: 222 EMVSKGISPNVVTYSALISG--FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279
Query: 189 ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYS 248
+ + M +G + + Y +M Y +KE ++ +S++ M ++G+ D+ S
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQS 339
Query: 249 YNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
YNI + ++ +F+ M K + P+ T++++ K+G++ A + + +
Sbjct: 340 YNILIDGFCKIKKVDEAMNLFKEMH-HKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 398
Query: 309 ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSLA 363
R D + Y S+ ++ K +V + L + + P + Y +I L
Sbjct: 399 HDRGVPPDIITYS---SILDALCKNHQVDKAIALLTKLKDQGIRPNMYT--YTILIDGLC 453
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
+ G +E IFE+ L + +M+ + +G FD+A A + + + P++
Sbjct: 454 KGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAV 513
Query: 424 SWETL 428
++E +
Sbjct: 514 TYEII 518
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 97/215 (45%), Gaps = 11/215 (5%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSL 169
+VKE+ K A + M+ RG + + + I +D K+ V A + F +
Sbjct: 314 LVKEVNK------AKSILYTMSQRGVNPDIQSYN--ILIDGFCKIKKVDEAMNLFKEMHH 365
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ D Y +L++ + A L+D+M D+G + Y+ ++ K + D+
Sbjct: 366 KHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDK 425
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++++++K++GIR ++Y+Y I + G E +FE + V K N T++ M
Sbjct: 426 AIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLV-KGYNITVNTYTVMI 484
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
+ G ++A L +++ D V Y ++
Sbjct: 485 HGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIII 519
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY- 343
+ T+ K+G+ A + LRRV+ + + V Y ++ + K + V ++LY
Sbjct: 165 YGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIID---GMCKDKHVNDAFDLYS 221
Query: 344 ----RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+ + P V Y A+IS +G ++ +F + + D N+++ + K
Sbjct: 222 EMVSKGISPNVVT--YSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+G + + F ++++G KPN ++ +L +G+ + + +A S L
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSIL 325
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 92/211 (43%), Gaps = 11/211 (5%)
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD-KAVNPNWTTFSTMATMYIKMGQVE 299
G +LD Y + G T + L +VD V PN +ST+ K V
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDL--LRRVDGNLVQPNVVMYSTIIDGMCKDKHVN 214
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
A + + S+ + V Y L+S + +VG+ ++ ++N + ++ P V ++
Sbjct: 215 DAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYT--FNI 272
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIE 415
++ + G ++ + +F + +K P + +M Y +KA++ ++ +
Sbjct: 273 LVDGFCKDGKMKEGKTVFA--MMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQ 330
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G P+ S+ L +G + +++ EA++ K
Sbjct: 331 RGVNPDIQSYNILIDGFCKIKKVDEAMNLFK 361
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K + +AL++ D M++RG + + LD + K H V A ++L
Sbjct: 378 LIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSI--LDALCKNHQVDKA----IALLT 431
Query: 172 TLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
LKD+ + Y L++ + +A + + + KGY + Y VM+ +
Sbjct: 432 KLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKG 491
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
+DE +++S+MK+ D +Y I + S + +K E + E++
Sbjct: 492 LFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMI 538
>gi|452823780|gb|EME30788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 925
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 126/280 (45%), Gaps = 13/280 (4%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+SL D VY +LL A VR+ A + + ++ +GY + + YN ++ + +
Sbjct: 460 MSLWGVFPDSYVYSSLLQACVRSNRFDLALKVYEHLQQEGYVMDAHMYNTLVNGAGSLGD 519
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM---KVDKAVNPNWT 283
+ E +V + +E + LD N +L SC + E +F M + PN
Sbjct: 520 LETAERLVRQAQEYNVGLDTALCNTFLVSCAKHHDISRAEHLFLEMSNGNMGSLALPNGK 579
Query: 284 TFSTMATMYIKMG--QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
T++ + +Y KM QVE+A E + R D + ++ Y V + ++
Sbjct: 580 TYNILINLYCKMNPPQVERALEMVERQRMYGFSPDESTFCPIIDAYFRVNDPFKAIELFK 639
Query: 342 LYRSV-FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS--SYDPRIANLMMSWYV 398
R+ P ++ + Y +I+ L R G ++ ++F S S S D N +++ +V
Sbjct: 640 KLRTEGSPKLSRVTYDTVINGLGRSGYLDDAFEVFRIRASETSLESLDDTTYNNLLNAFV 699
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWET-----LAEGHI 433
+ D+AE FF + G +P++ ++ L++GH+
Sbjct: 700 ENNRLDEAERFFQESLASGFQPSTATYNIRLKALLSQGHL 739
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 102/229 (44%), Gaps = 14/229 (6%)
Query: 131 WMNNRGERFRLSASDAAIQ----------LDLIAKVHGVASAEDFFL-SLPDTLK-DRRV 178
++++ E FR+ AS+ +++ L+ + + + AE FF SL +
Sbjct: 666 YLDDAFEVFRIRASETSLESLDDTTYNNLLNAFVENNRLDEAERFFQESLASGFQPSTAT 725
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L A + L+++M +G + + +N ++ + ++ + Y ++S+V+ ++
Sbjct: 726 YNIRLKALLSQGHLMQGFKLVEEMVSRGIQPNLITFNTLLDIALRGQHYVYIDSIVNAIR 785
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN-WTTFSTMATMYIKMGQ 297
+ +R D+Y++N+ L + G K E ++ M + + P+ +T MA +
Sbjct: 786 KSNVRPDIYTFNLRLQAAYRLGVFMKAEEIYSEM-IASNIRPDVYTYVYLMACAGRRNDT 844
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
V+ + V+ + + Y LL G E+V + N ++V
Sbjct: 845 VQGVKYLKEAVKKGRQPKGPIAYRPLLHAAMRNGSIEDVITIVNAMKAV 893
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 122/267 (45%), Gaps = 5/267 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ +++N +A +A + D+M +G A + YN ++ Y K+ E S+ +EM
Sbjct: 230 FNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMT 289
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
KGI DV ++ + G+ E+ G+ M+ ++ + N TF+ + + K G +
Sbjct: 290 RKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMR-ERGLQMNEITFTALIDGFCKKGFL 348
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYH 356
+ A ++R + V Y+ L++ Y VG+ +E + + V P V Y
Sbjct: 349 DDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVT--YS 406
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++S+ + GD ++ ++ L D + ++ +E A F ++I
Sbjct: 407 TILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISL 466
Query: 417 GGKPNSTSWETLAEGHIRERRILEALS 443
G +P+ ++ +L +GH +E + ALS
Sbjct: 467 GLQPDEVTYTSLIDGHCKEGNVERALS 493
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 116/263 (44%), Gaps = 1/263 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+ A+ RA AE L+D MR+ G + + +N ++ K ++ + EM
Sbjct: 195 YNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMV 254
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++G+ D SYN + G + + VF M K + P+ TF+++ + K G +
Sbjct: 255 KEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEM-TRKGIMPDVVTFTSLIHVMCKAGNL 313
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
E+A +R + R + + + L+ + G ++ R + + Y+A+
Sbjct: 314 ERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNAL 373
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I+ +G ++ ++ E + D + ++S Y K G+ A ++E G
Sbjct: 374 INGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433
Query: 419 KPNSTSWETLAEGHIRERRILEA 441
P++ ++ +L E+R+ +A
Sbjct: 434 LPDAITYSSLIRVLCEEKRLGDA 456
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 125/284 (44%), Gaps = 24/284 (8%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ AL++ + + +A L + +MR + YN ++ Y + DE +V EM+
Sbjct: 335 FTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREME 394
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMG 296
KG++ DV +Y+ LS+ G T F+L + ++ V P+ T+S++ + +
Sbjct: 395 AKGVKPDVVTYSTILSAYCKNGDTHS---AFQLNQQMLENGVLPDAITYSSLIRVLCEEK 451
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
++ A + + S D V Y L+ + G E + + + V P V
Sbjct: 452 RLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVT-- 509
Query: 355 YHAMISSLARIGDIEGMEKIF-----EEWLSVKSSYDP-----RIANL-----MMSWYVK 399
Y +I+ L++ + +++ EE + YD R A L ++ +
Sbjct: 510 YSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCM 569
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+G ++A+ + SI++ + + + L GH RE +++ALS
Sbjct: 570 KGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALS 613
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 119/282 (42%), Gaps = 15/282 (5%)
Query: 161 SAEDFFLS-LPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
SA FF S L D + + Y L+ A R A ++ MR G +++ YN ++
Sbjct: 140 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLV 199
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
+ + E D E +V M+E G++ ++ ++N ++ G E VF+ M V + +
Sbjct: 200 AAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEM-VKEGL 258
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
P+ +++T+ Y K+G +A + + D V + L+ + G E
Sbjct: 259 APDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVG 318
Query: 339 VWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA------NL 392
+ R + + + A+I + G ++ + L+V+ RI N
Sbjct: 319 LVREMRERGLQMNEITFTALIDGFCKKGFLD------DALLAVREMRQCRIQPSVVCYNA 372
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+++ Y G D+A + +G KP+ ++ T+ + +
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCK 414
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 110/265 (41%), Gaps = 6/265 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y A+L A A + +A D M G A + YN+++ E S++ +M+
Sbjct: 126 YNAVLLALSDASLP-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMR 184
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G + +YN +++ G ++ E + ++M+ + + PN TF+++ K G++
Sbjct: 185 GAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMR-EGGLKPNLVTFNSVVNGICKAGRM 243
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
E A + + D V Y+ L+ Y VG E V+ + + P V +
Sbjct: 244 EDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT--FT 301
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++I + + G++E + E + ++ + K+G D A + +
Sbjct: 302 SLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQC 361
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
+P+ + L G+ R+ EA
Sbjct: 362 RIQPSVVCYNALINGYCMVGRMDEA 386
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 156/334 (46%), Gaps = 19/334 (5%)
Query: 117 RKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLK 174
+K RR LE++ M + G +++ I ++ + + V ++ S+
Sbjct: 200 KKRRRIDLCLEIFRRMVDSG--VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKP 257
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ Y ++NAYV+ R E ++ M+ G + + Y ++M L +K + + E +
Sbjct: 258 EAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLF 317
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+E+GI DV+ Y +S +G+ ++ +F+ + +K ++P+ T+ + K
Sbjct: 318 DEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL-TEKGLSPSSYTYGALIDGVCK 376
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+G++ AE + ++S+ +V ++ L+ Y G +E ++++ + G
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDV-------MEQKG 429
Query: 355 YHAMISSLARIGDIEGMEKIFEE---WLSVKSSYDPRIANL----MMSWYVKEGNFDKAE 407
+ A + + I K ++E WL +++ + ++ Y KEGN ++A+
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAK 489
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F + +G +PN+ ++ + + ++ +I EA
Sbjct: 490 RLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 9/248 (3%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD--RRVYG 180
K A ++D + +G S+ +D + KV + +AE + + + V+
Sbjct: 346 KRAFLLFDELTEKG--LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
L++ Y R M A ++ D M KG+ N + + + ++K YDE + + M E
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G++L SY + +G+ E+ + +F M K V PN T++ M Y K G++++
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS-SKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSV--GKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
A + +E+ G D Y Y ++G +E R+++ ++ Y M
Sbjct: 523 ARKLRANMEA--NGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 359 ISSLARIG 366
IS L++ G
Sbjct: 581 ISGLSKAG 588
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 115/295 (38%), Gaps = 36/295 (12%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
+ YV M + D M KG ++ V + K + D + M + G
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+++ VYS I + +G EK + + + V K + P T++T+ Y+K
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSV-KGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV---------------------W 340
E L+ ++ ++V Y L+ L GK + ++ W
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 341 NLYRS-------VFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
N + +F +T G Y A+I + ++G++ E + E S +
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ N ++ Y ++G D+A ++ + ++G + + + T+A R +R EA
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 131/269 (48%), Gaps = 9/269 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y L+ +++ G+A ++ +M+++G A YN ++ K K DE S + EM
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G++ + ++Y ++S + + M+ + V PN + + Y K G+
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLINEYCKKGK 572
Query: 298 VEKAEESLRR-VESRITGRDRVPYHYLLS-LYGS--VGKKEEVYRVWNLYRSVFPGVTNL 353
V +A + R V+ I G D Y L++ L+ + V EE++R + + P V
Sbjct: 573 VIEACSAYRSMVDQGILG-DAKTYTVLMNGLFKNDKVDDAEEIFREMR-GKGIAPDV--F 628
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +I+ +++G+++ IF+E + + + I N+++ + + G +KA+ + +
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
+G PN+ ++ T+ +G+ + + EA
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 12/271 (4%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L ++ + L+N Y + A M D+G + Y V+M K + D+ E
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EM+ KGI DV+SY + ++ G+ +K +F+ M V++ + PN ++ +
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM-VEEGLTPNVIIYNMLLGG 671
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
+ + G++EKA+E L + + + V Y ++ Y G E +R+++ + + P
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP- 730
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIF-EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ Y ++ R+ D+E IF SS P N +++W K G +
Sbjct: 731 -DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP--FNALINWVFKFGKTELKTE 787
Query: 409 FFNSIIEEG----GKPNSTSWETLAEGHIRE 435
N +++ GKPN ++ + + +E
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 127/288 (44%), Gaps = 16/288 (5%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D + Y L+N + +AE + +MR KG A Y V++ + K+ + S
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM E+G+ +V YN+ L G EK + + + M V K ++PN T+ T+ Y
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGY 707
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYL-LSLYGSVGKKEEVYRVWNLYRSVFPGV- 350
K G + +A R+ + + VP ++ +L + +V R ++ + G
Sbjct: 708 CKSGDLAEA----FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCA 763
Query: 351 -TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD----PR--IANLMMSWYVKEGNF 403
+ ++A+I+ + + G E ++ + S+D P N+M+ + KEGN
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMD--GSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
+ A+ F+ + P ++ +L G+ + R E A AA
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 11/268 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG ++ + A ++ +M G + + Y ++ +++ + + ++ EMK
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E+GI D++ YN + ++ F + V+ + PN T+ + YI+ +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARS-FLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS-VFPGVTNLG--- 354
A++ ++ + ++V L++ Y KK +V + YRS V G+ LG
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEY---CKKGKVIEACSAYRSMVDQGI--LGDAK 593
Query: 355 -YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +++ L + ++ E+IF E + D ++++ + K GN KA + F+ +
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
+EEG PN + L G R I +A
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 115/266 (43%), Gaps = 11/266 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y LL + R+ A+ L+D+M KG +++ Y ++ Y K + E + EM
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K KG+ D + Y + C E+ +F K K + F+ + K G+
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK--KGCASSTAPFNALINWVFKFGK 781
Query: 298 VEKAEESLRRVES----RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
E E L R+ R + V Y+ ++ G E +++ ++ T +
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA-----EA 408
Y ++++ ++G M +F+E ++ D + +++++ ++KEG KA +
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIR 434
F + +++G K + ++ L G +
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAK 927
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 120/300 (40%), Gaps = 7/300 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L + M KG Y+V++ KIK ++ +S++ EM G+ LD ++Y++ +
Sbjct: 264 LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+ + +G+ M V +N + + K G +EKA+ + +
Sbjct: 324 KGRNADAAKGLVHEM-VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y L+ Y + Y + + ++ Y ++ + GD++G I +E
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
++ + I ++ +++ F A + E+G P+ + +L G + +R
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 438 ILEALSCLKGAFAAEGAKS-WRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEK 496
+ EA S F E ++ +P F E S+ S + +V +R+ G K
Sbjct: 503 MDEARS-----FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/251 (17%), Positives = 105/251 (41%), Gaps = 9/251 (3%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ L D M G + Y ++ Y + K + ++ EMK++ I + Y+Y +
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 255 SCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
S G ++G + ++K + PN ++T+ +++ + A L+ ++ +
Sbjct: 426 GMCSSGD---LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEV--YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
D Y+ L+ + +E + V + + P Y A IS +
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA--FTYGAFISGYIEASEFAS 540
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+K +E + + +++ Y K+G +A + + S++++G ++ ++ L
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 431 GHIRERRILEA 441
G + ++ +A
Sbjct: 601 GLFKNDKVDDA 611
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 57/305 (18%), Positives = 118/305 (38%), Gaps = 40/305 (13%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ Y L++ + + +A+ L+ +M G ++ + Y++++ +K + D + +V
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM GI + Y Y+ + +G EK + +F+ M + + P ++++ Y +
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM-IASGLIPQAQAYASLIEGYCRE 395
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
V + E L ++ R Y ++ S G + Y + + P V
Sbjct: 396 KNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI- 454
Query: 354 GYHAMISSL---ARIGD-----------------------IEGMEKI--FEEWLS----- 380
Y +I + +R GD I G+ K +E S
Sbjct: 455 -YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 381 VKSSYDPR--IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
V++ P +S Y++ F A+ + + E G PN L + ++ ++
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 439 LEALS 443
+EA S
Sbjct: 574 IEACS 578
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 114/256 (44%), Gaps = 1/256 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+NA +A A L+D MR +G + YN +++ ++ D+ +
Sbjct: 368 DVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLF 427
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S M+ G+ Y+Y + + G G K FE MK + + PN + +
Sbjct: 428 SNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKA-RGIAPNIVACNASLYSLAE 486
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
MG++ +A+ ++S D V Y+ ++ Y VG+ +E ++ + V +
Sbjct: 487 MGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIV 546
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
+++I +L + G +E ++F + + N++++ KEG KA F S+
Sbjct: 547 INSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMN 606
Query: 415 EEGGKPNSTSWETLAE 430
G PN+ ++ TL +
Sbjct: 607 GHGCSPNTITFNTLLD 622
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 121/272 (44%), Gaps = 11/272 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++A AR +A L KM+ + + Y ++ + D+VE +
Sbjct: 298 DVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIW 357
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM+ G DV ++ I +++ G + + + M+ + V PN T++T+ + ++
Sbjct: 358 TEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMR-KQGVLPNLHTYNTLISGLLR 416
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSL-----YGSVGKKEEVYRVWNLYRSVFPG 349
+++ A + +ES G + Y Y+L + G GK E + R + P
Sbjct: 417 ANRLDDALDLFSNMES--LGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKA-RGIAPN 473
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ + +A + SLA +G + + +F E S + D N+MM Y K G D+A
Sbjct: 474 I--VACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKL 531
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ + + +P+ +L + + R+ EA
Sbjct: 532 LSEMSKVQCEPDVIVINSLIDTLYKAGRVEEA 563
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 130/322 (40%), Gaps = 50/322 (15%)
Query: 150 LDLIAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
+D +VH V A + F + PDT Y +L++A+ ++ L D+M
Sbjct: 797 IDGFLEVHNVEVAWNLFEEMKSAGCAPDTF----TYNSLIDAHGKSGKINELFDLYDEML 852
Query: 204 DKGYAVHSLPYNVM-------------MTLY----------------------MKIKEYD 228
+G +++ YN++ M LY +K D
Sbjct: 853 TRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLD 912
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ M M G R + YNI ++ G G + F+ M V + + P+ +++ +
Sbjct: 913 DAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRM-VKEGIRPDLKSYTIL 971
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSV 346
+ G+V+ A +++ D V Y+ +++ G + EE +++ R +
Sbjct: 972 VDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGI 1031
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
P + Y+++I +L +G IE KI+EE + + N ++ Y GN + A
Sbjct: 1032 VPDLYT--YNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELA 1089
Query: 407 EAFFNSIIEEGGKPNSTSWETL 428
+ ++ G PN+ ++ L
Sbjct: 1090 YGIYKKMMVGGCDPNTGTFAQL 1111
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 150/350 (42%), Gaps = 8/350 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+V L K R A ++ D M +G L + I + + + + A D F ++
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISG--LLRANRLDDALDLFSNMES 432
Query: 172 TLKDRRVYG--ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ Y L++ + ++ G A +KM+ +G A + + N + ++ E
Sbjct: 433 LGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGE 492
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST-EKMEGVFELMKVDKAVNPNWTTFSTM 288
++M +E+K G+ D +YN+ + G E ++ + E+ KV P+ +++
Sbjct: 493 AKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ--CEPDVIVINSL 550
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
K G+VE+A + R+E V Y+ LL+ G G+ ++ +++
Sbjct: 551 IDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGC 610
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ ++ ++ L + +++ K+F + ++ D N ++ ++K+ A
Sbjct: 611 SPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIW 670
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWR 458
F+ +++ +P+ + TL G I+ +I +A + F G+ R
Sbjct: 671 LFHQ-MKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDR 719
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 100/229 (43%), Gaps = 36/229 (15%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN+++ ++++ + ++ EMK G D ++YN + + G G ++ +++ M
Sbjct: 793 YNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEM- 851
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ + PN T++ + + +K +++KA + LY
Sbjct: 852 LTRGCKPNTITYNMVISNLVKSNRLDKA----------------------MDLY------ 883
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+NL F T + +I L + G ++ ++F+ + + I N++
Sbjct: 884 ------YNLVSGDFSP-TPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNIL 936
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ Y K G+ D A FF +++EG +P+ S+ L + R+ +AL
Sbjct: 937 VNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDAL 985
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/358 (18%), Positives = 140/358 (39%), Gaps = 25/358 (6%)
Query: 170 PDTLKDRRVYGALLNAY---------VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTL 220
P L+ R G +LNAY +++ A + +M +G ++ +M
Sbjct: 179 PSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVA 238
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--DKAV 278
K + V ++ EM+ G+R ++Y+Y I + G G K++ + +MK D
Sbjct: 239 SGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDG---KIDEAYRIMKRMDDDGC 295
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
P+ T++ + +++ A +++S D+V Y LL + G ++V +
Sbjct: 296 GPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEK 355
Query: 339 VWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
+W + + + ++++L + G I + + + N ++S +
Sbjct: 356 IWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLL 415
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWR 458
+ D A F+++ G +P + ++ L + H + +AL F A+
Sbjct: 416 RANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALE----TFEKMKARGIA 471
Query: 459 PKPVNVINFFKACEEESDMGSKEAFVALLRQPG-------YRKEKDYMSLIGLTDEAV 509
P V + E +G +A L+ G Y S +G DEA+
Sbjct: 472 PNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAI 529
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 4/173 (2%)
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
T VF + V P ++ + ++++ VE A ++S D Y+
Sbjct: 770 TSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYN 829
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
L+ +G GK E++ +++ L R P + Y+ +IS+L + ++ ++ +
Sbjct: 830 SLIDAHGKSGKINELFDLYDEMLTRGCKP--NTITYNMVISNLVKSNRLDKAMDLYYNLV 887
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
S S P ++ +K G D A F+ ++ G +PNS + L G+
Sbjct: 888 SGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGY 940
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 106/249 (42%), Gaps = 36/249 (14%)
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ S + +M+E G L+ YSYN + G ++ V+ M V + + P+ TFS +
Sbjct: 177 QAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRM-VSEGLKPSLKTFSAL 235
Query: 289 A-------------------------------TMYIKM----GQVEKAEESLRRVESRIT 313
T+ I++ G++++A ++R++
Sbjct: 236 MVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGC 295
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
G D V Y L+ + K ++ ++ +S + Y ++ + G ++ +EK
Sbjct: 296 GPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEK 355
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
I+ E + + D ++++ K G ++A +++ ++G PN ++ TL G +
Sbjct: 356 IWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLL 415
Query: 434 RERRILEAL 442
R R+ +AL
Sbjct: 416 RANRLDDAL 424
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 5/204 (2%)
Query: 100 GGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGV 159
G S T ++ L K R A E++D M + G R +++ I ++ K+ V
Sbjct: 889 GDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYG--CRPNSAIYNILVNGYGKLGHV 946
Query: 160 ASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
+A +FF + D + Y L++ A +A +K++ G + YN+M
Sbjct: 947 DTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLM 1006
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ + + +E S+ EM+ +GI D+Y+YN + + G G E+ ++E ++
Sbjct: 1007 INGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQF-IG 1065
Query: 278 VNPNWTTFSTMATMYIKMGQVEKA 301
+ PN T++ + Y G E A
Sbjct: 1066 LKPNVFTYNALIRGYTLSGNSELA 1089
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRR 177
K A E + M G R L + I +D++ V A +F L D
Sbjct: 942 KLGHVDTACEFFKRMVKEGIRPDLKSY--TILVDILCIAGRVDDALHYFEKLKQAGLDPD 999
Query: 178 V--YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ Y ++N R++ A L +M+++G YN ++ + +E +
Sbjct: 1000 LVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYE 1059
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
E++ G++ +V++YN + G++E G+++ M V +PN TF+ +
Sbjct: 1060 ELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVG-GCDPNTGTFAQL 1111
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 12/271 (4%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L ++ + L+N Y + A M D+G + Y V+M K + D+ E
Sbjct: 553 VLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EM+ KGI DV+SY + ++ G+ +K +F+ M V++ + PN ++ +
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM-VEEGLTPNVIIYNMLLGG 671
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
+ + G++EKA+E L + + + V Y ++ Y G E +R+++ + + P
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP- 730
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIF-EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ Y ++ R+ D+E IF SS P N +++W K G +
Sbjct: 731 -DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP--FNALINWVFKFGKTELKTE 787
Query: 409 FFNSIIEEG----GKPNSTSWETLAEGHIRE 435
N +++ GKPN ++ + + +E
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 127/288 (44%), Gaps = 16/288 (5%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D + Y L+N + +AE + +MR KG A Y V++ + K+ + S
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM E+G+ +V YN+ L G EK + + + M V K ++PN T+ T+ Y
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGY 707
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYL-LSLYGSVGKKEEVYRVWNLYRSVFPGV- 350
K G + +A R+ + + VP ++ +L + +V R ++ + G
Sbjct: 708 CKSGDLAEA----FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCA 763
Query: 351 -TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD----PR--IANLMMSWYVKEGNF 403
+ ++A+I+ + + G E ++ + S+D P N+M+ + KEGN
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMD--GSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
+ A+ F+ + P ++ +L G+ + R E A AA
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 130/269 (48%), Gaps = 9/269 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y L+ +++ G+A ++ +M+++G A YN ++ K K DE S + EM
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G++ + ++Y ++S + + M+ + V PN + + Y K +
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLINEYCKKEK 572
Query: 298 VEKAEESLRR-VESRITGRDRVPYHYLLS-LYGS--VGKKEEVYRVWNLYRSVFPGVTNL 353
V +A + R V+ I G D Y L++ L+ + V EE++R + + P V
Sbjct: 573 VIEACSAYRSMVDQGILG-DAKTYTVLMNGLFKNDKVDDAEEIFREMR-GKGIAPDV--F 628
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +I+ +++G+++ IF+E + + + I N+++ + + G +KA+ + +
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
+G PN+ ++ T+ +G+ + + EA
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 121/268 (45%), Gaps = 11/268 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG ++ + A ++ +M G + + Y ++ +++ + + ++ EMK
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E+GI D++ YN + ++ F + V+ + PN T+ + YI+ +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARS-FLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS-VFPGVTNLG--- 354
A++ ++ + ++V L++ Y KKE+V + YRS V G+ LG
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEY---CKKEKVIEACSAYRSMVDQGI--LGDAK 593
Query: 355 -YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +++ L + ++ E+IF E + D ++++ + K GN KA + F+ +
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
+EEG PN + L G R I +A
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 115/266 (43%), Gaps = 11/266 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y LL + R+ A+ L+D+M KG +++ Y ++ Y K + E + EM
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K KG+ D + Y + C E+ +F K K + F+ + K G+
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK--KGCASSTAPFNALINWVFKFGK 781
Query: 298 VEKAEESLRRVES----RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
E E L R+ R + V Y+ ++ G E +++ ++ T +
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA-----EA 408
Y ++++ ++G M +F+E ++ D + +++++ ++KEG KA +
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIR 434
F + +++G K + ++ L G +
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAK 927
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 120/300 (40%), Gaps = 7/300 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L + M KG Y+V++ KIK ++ +S++ EM G+ LD ++Y++ +
Sbjct: 264 LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+ + +G+ M V +N + + K G +EKA+ + +
Sbjct: 324 KGRNADAAKGLVHEM-VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y L+ Y + Y + + ++ Y ++ + GD++G I +E
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
++ + I ++ +++ F A + E+G P+ + +L G + +R
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 438 ILEALSCLKGAFAAEGAKS-WRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEK 496
+ EA S F E ++ +P F E S+ S + +V +R+ G K
Sbjct: 503 MDEARS-----FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 55/308 (17%), Positives = 119/308 (38%), Gaps = 46/308 (14%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ Y L++ + + +A+ L+ +M G ++ + Y++++ +K + D + +V
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM GI + Y Y+ + +G EK + +F+ M + + P ++++ Y +
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM-IASGLIPQAQAYASLIEGYCRE 395
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
V + E L ++ R Y ++ S G + Y + + P V
Sbjct: 396 KNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI- 454
Query: 354 GYHAMISSL---ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
Y +I + +R GD ++ +E + D N ++ K D+A +F
Sbjct: 455 -YTTLIKTFLQNSRFGD---AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 411 NSIIEEGGKPNSTSWETLAEGHI-----------------------------------RE 435
++E G KPN+ ++ G+I ++
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 436 RRILEALS 443
+++EA S
Sbjct: 571 EKVIEACS 578
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/251 (17%), Positives = 104/251 (41%), Gaps = 9/251 (3%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ L D M G + Y ++ Y + K + ++ EMK++ I + Y+Y +
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 255 SCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
S G ++G + ++K + PN ++T+ +++ + A L+ ++ +
Sbjct: 426 GMCSSGD---LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEV--YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
D Y+ L+ + +E + V + + P Y A IS +
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA--FTYGAFISGYIEASEFAS 540
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+K +E + + +++ Y K+ +A + + S++++G ++ ++ L
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 431 GHIRERRILEA 441
G + ++ +A
Sbjct: 601 GLFKNDKVDDA 611
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 131/273 (47%), Gaps = 18/273 (6%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++N +V+A M G+A + +MR+KG + + Y + Y + D M++++
Sbjct: 543 TYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDV 602
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +G++ D+ +YN ++ +G+ + ++ D + PN ++++ T Y +
Sbjct: 603 RRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKD-GLAPNTVVYNSLITGYKNLNM 661
Query: 298 VEKAEESLRRVESRITG---RDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVT 351
+ +E + ES I G D Y L+ + G+V E+Y + + P
Sbjct: 662 M---KEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEM-MAKGYIPDA- 716
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ A+ L R GDI+G +K+ EE + + I N++++ Y+++ +A +
Sbjct: 717 -FTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHD 775
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
++ G +P+ T+++ L ++ LEA +C
Sbjct: 776 EMLNMGIQPDDTTYDILV-----SKKFLEADNC 803
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 157/349 (44%), Gaps = 24/349 (6%)
Query: 105 TKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI---AKVHGVAS 161
+ +EL V+K L RR+K A+ +++ M + G D +LI + H +
Sbjct: 366 STFELSLVLKGLLNDRRWKDAVCLFEEMADSG------LPDVFTYNNLIHWHCQAHKLRE 419
Query: 162 AEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
A + F D +K V Y +LL Y + A L +M +G+ + + Y
Sbjct: 420 ALNLF----DRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYI 475
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
+M Y+ K++D +++ EMK+ G+ + Y+YN+ ++ +++G+ + +
Sbjct: 476 TLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSE 535
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ P T++++ ++K G + A +++ + + + Y + Y G +
Sbjct: 536 GFI-PTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDM 594
Query: 336 VYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
++ N R + P + + Y+A+I+ + G++ ++ L + + + N +
Sbjct: 595 ALKMLNDVRRRGLQPDI--VAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSL 652
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ Y + F+ S+I+ G +++++ TL +G ++ + AL
Sbjct: 653 ITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFAL 701
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 138/333 (41%), Gaps = 22/333 (6%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP--DTLKDRRVYG 180
K AL ++ M RG R DA + L +H A F +P + D+RVY
Sbjct: 174 KDALALFMEMRGRGYRVDAWMFDALMSACLKEGMH--EDAVRLFDEMPGAEIDPDQRVYA 231
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+ A + G A ++ +M++ G+ Y M+ + +K +E + EM++
Sbjct: 232 LAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDA 291
Query: 241 GIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
G ++DV + C Q + E +K + P + + ++G +
Sbjct: 292 GKKMDVIVATTLMRGYCLRQEVGNALNLFKETLK--DGIVPTKVMYGVLIRGCDQVGMTQ 349
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLY--GSVGK---KEEVYRVWNLYRSVFPGVTNLG 354
KA E R ++TG+ +P + LSL G + K+ V + S P V
Sbjct: 350 KAYELCR----QMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDV--FT 403
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I + + +F+ K+ P I N ++ Y K+G D+A ++
Sbjct: 404 YNNLIHWHCQAHKLREALNLFDRM--KKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSE 461
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ EG KPN ++ TL G+I ++ A + L
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALL 494
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 131/269 (48%), Gaps = 9/269 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y L+ +++ G+A ++ +M+++G A YN ++ K K DE S + EM
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G++ + ++Y ++S + + M+ + V PN + + Y K G+
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLINEYCKKGK 572
Query: 298 VEKAEESLRR-VESRITGRDRVPYHYLLS-LYGS--VGKKEEVYRVWNLYRSVFPGVTNL 353
V +A + R V+ I G D Y L++ L+ + V EE++R + + P V
Sbjct: 573 VIEACSAYRSMVDQGILG-DAKTYTVLMNGLFKNDKVDDAEEIFREMR-GKGIAPDV--F 628
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +I+ +++G+++ IF+E + + + I N+++ + + G +KA+ + +
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
+G PN+ ++ T+ +G+ + + EA
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 12/271 (4%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L ++ + L+N Y + A M D+G + Y V+M K + D+ E
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EM+ KGI DV+SY + ++ G+ +K +F+ M V++ + PN ++ +
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM-VEEGLTPNVIIYNMLLGG 671
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
+ + G++EKA+E L + + + V Y ++ Y G E +R+++ + + P
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP- 730
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIF-EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ Y ++ R+ D+E IF SS P N +++W K G +
Sbjct: 731 -DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP--FNALINWVFKFGKTELKTE 787
Query: 409 FFNSIIEEG----GKPNSTSWETLAEGHIRE 435
N +++ GKPN ++ + + +E
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 127/288 (44%), Gaps = 16/288 (5%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D + Y L+N + +AE + +MR KG A Y V++ + K+ + S
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM E+G+ +V YN+ L G EK + + + M V K ++PN T+ T+ Y
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGY 707
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYL-LSLYGSVGKKEEVYRVWNLYRSVFPGV- 350
K G + +A R+ + + VP ++ +L + +V R ++ + G
Sbjct: 708 CKSGDLAEA----FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCA 763
Query: 351 -TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD----PR--IANLMMSWYVKEGNF 403
+ ++A+I+ + + G E ++ + S+D P N+M+ + KEGN
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMD--GSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAA 451
+ A+ F+ + P ++ +L G+ + R E A AA
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 11/268 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG ++ + A ++ +M G + + Y ++ +++ + + ++ EMK
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E+GI D++ YN + ++ F + V+ + PN T+ + YI+ +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARS-FLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS-VFPGVTNLG--- 354
A++ ++ + ++V L++ Y KK +V + YRS V G+ LG
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEY---CKKGKVIEACSAYRSMVDQGI--LGDAK 593
Query: 355 -YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +++ L + ++ E+IF E + D ++++ + K GN KA + F+ +
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
+EEG PN + L G R I +A
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 115/266 (43%), Gaps = 11/266 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y LL + R+ A+ L+D+M KG +++ Y ++ Y K + E + EM
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K KG+ D + Y + C E+ +F K K + F+ + K G+
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK--KGCASSTAPFNALINWVFKFGK 781
Query: 298 VEKAEESLRRVES----RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
E E L R+ R + V Y+ ++ G E +++ ++ T +
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA-----EA 408
Y ++++ ++G M +F+E ++ D + +++++ ++KEG KA +
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIR 434
F + +++G K + ++ L G +
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAK 927
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/251 (17%), Positives = 105/251 (41%), Gaps = 9/251 (3%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ L D M G + Y ++ Y + K + ++ EMK++ I + Y+Y +
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 255 SCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
S G ++G + ++K + PN ++T+ +++ + A L+ ++ +
Sbjct: 426 GMCSSGD---LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEV--YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
D Y+ L+ + +E + V + + P Y A IS +
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA--FTYGAFISGYIEASEFAS 540
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+K +E + + +++ Y K+G +A + + S++++G ++ ++ L
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 431 GHIRERRILEA 441
G + ++ +A
Sbjct: 601 GLFKNDKVDDA 611
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%)
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
N Y +I L + + + + + E +S + P + + + KEG +KA+A F+
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRI 438
+I G P + ++ +L EG+ RE+ +
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNV 398
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 57/305 (18%), Positives = 118/305 (38%), Gaps = 40/305 (13%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ Y L++ + + +A+ L+ +M G ++ + Y++++ +K + D + +V
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM GI + Y Y+ + +G EK + +F+ M + + P ++++ Y +
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM-IASGLIPQAQAYASLIEGYCRE 395
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
V + E L ++ R Y ++ S G + Y + + P V
Sbjct: 396 KNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI- 454
Query: 354 GYHAMISSL---ARIGD-----------------------IEGMEKI--FEEWLS----- 380
Y +I + +R GD I G+ K +E S
Sbjct: 455 -YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 381 VKSSYDPR--IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
V++ P +S Y++ F A+ + + E G PN L + ++ ++
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 439 LEALS 443
+EA S
Sbjct: 574 IEACS 578
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 5/266 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+YG L++ Y L++ M + G + +N++ T Y K DE + ++M
Sbjct: 345 IYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM 404
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K++G+ DV +Y + + G + F M +++ V PN F+++ + +
Sbjct: 405 KQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQM-MNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF--PGVTNLGY 355
EKA+E + ++ D V ++ +L + G+ + R+ +L V PGV + Y
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGV--ISY 521
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I +G I+ K + LSV D N ++ Y + G D A F ++
Sbjct: 522 TTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLR 581
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
G P ++ T+ G RR EA
Sbjct: 582 NGITPGVVTYSTILHGLFTTRRFSEA 607
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 147/327 (44%), Gaps = 8/327 (2%)
Query: 120 RRYKHALEVYDWM-NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV 178
+R + ALE+ M +++G + AI ++ V A + FL + D V
Sbjct: 179 KRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNV 238
Query: 179 --YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y +++ +A++ AE + +M DKG + YN ++ Y+ I ++ EV M+ E
Sbjct: 239 VTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEE 298
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M G++ D Y+Y L+ + G + +F+ M + K + PN + + Y G
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSM-IRKGIKPNVAIYGILIHGYATKG 357
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLG 354
+ + + L + D ++ + + Y +E ++N + + P V N
Sbjct: 358 ALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN-- 415
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y A+I +L ++G ++ F + ++ + + + N ++ ++KA+ F+ ++
Sbjct: 416 YGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEML 475
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
+G +P+ + T+ + ++++A
Sbjct: 476 NQGIRPDVVFFNTILCNLCTKGQVMKA 502
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 123/278 (44%), Gaps = 12/278 (4%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD---KGYAVHSLPYNVMMTLYMKIKE 226
PD + Y LL + + A L+ M D + + + Y +++ + +
Sbjct: 163 PDVVS----YNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQ 218
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
D+ ++ EM ++GI+ +V +Y + ++ EGVF+ M +DK V P+ T++
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQM-IDKGVKPDNDTYN 277
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYR 344
+ Y+ +G+ ++ L + + D Y LL+ + G+ E +++ + +
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRK 337
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ P V Y +I A G + M + + S D I N++ + Y K+ D
Sbjct: 338 GIKPNVAI--YGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+A FN + ++G P+ ++ L + + R+ +A+
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAV 433
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 128/329 (38%), Gaps = 73/329 (22%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + YGAL++A + +A L ++M ++G A + +N ++ + ++++
Sbjct: 411 PDVVN----YGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEK 466
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM----------------- 272
+ EM +GIR DV +N L + ++G K + + +LM
Sbjct: 467 AKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIG 526
Query: 273 ------KVDKA-----------VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
++D+A + P+ T++T+ Y + G+++ A R +
Sbjct: 527 GHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITP 586
Query: 316 DRVPYHYLL-SLYGS--VGKKEEVY-------RVWNL--YRSVFPGVTN----------- 352
V Y +L L+ + + +E+Y + WN+ Y + G++
Sbjct: 587 GVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLF 646
Query: 353 ------------LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
++ MI +L + G E +F S D L+ ++E
Sbjct: 647 QSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEE 706
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
G ++ + F+++ + G PNS L
Sbjct: 707 GYLEEFDDLFSAMEKSGTTPNSRMLNALV 735
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 174/421 (41%), Gaps = 26/421 (6%)
Query: 48 PVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSA-SVLNDWEKGGRSLTK 106
P + S + S GT +P + +IF SL Q+G A SV+ K G +
Sbjct: 72 PTVVSLCSHLDSKGT----PKPSLVTLSIFIN-SLTHLGQMGLAFSVMAKIVKRGFGVDP 126
Query: 107 WELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF 166
+ L ++K L R AL +YD ++G F D LI + + D
Sbjct: 127 FTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSF-----DEVCYGTLINGLCKMGKTRDAI 181
Query: 167 LSLPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY 221
L K + +Y +++ + + A L +M KG + YN ++ +
Sbjct: 182 ELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGF 241
Query: 222 MKIKEYDEVESMVSEMKEK-GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
++ +++EM K +R DVY++NI + + G + VF LM + + + P
Sbjct: 242 CGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLM-IKRGLEP 300
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
+ + + + + G + +A+E R+ R + + Y L++ Y V +E R+
Sbjct: 301 DVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLL 360
Query: 341 NLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
R++ P Y+ ++ L++ G + + E + + D N+++ Y+
Sbjct: 361 TEMHQRNLVPDTVT--YNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYL 418
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWR 458
K DKA A F I++ G PN ++ L +G + R+ A K F K R
Sbjct: 419 KRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAA----KEIFQLLSVKGCR 474
Query: 459 P 459
P
Sbjct: 475 P 475
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L++ MR G A + YNV++ Y+K + D+ ++ + + GI ++ +YNI +
Sbjct: 394 LVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLC 453
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
G + + +F+L+ V K PN T++ M
Sbjct: 454 KGGRMKAAKEIFQLLSV-KGCRPNIRTYNIM 483
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 136/297 (45%), Gaps = 19/297 (6%)
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTL------KDRRVYGALLNAYVRARMRGNAELLI 199
++ +++ K +G++ + + L +++ D+ Y L+ A M A+ +
Sbjct: 503 TVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYL 562
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
+KMR+ GY +PY +++ ++K+ + + E + EM E I DV Y + +++
Sbjct: 563 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 622
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G+ ++ E MK + + N ++++ +Y K+G +++AE R++ R + P
Sbjct: 623 GNVQQAMSYVEAMK-EAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKL-LRSCNETQYP 680
Query: 320 YHY----LLSLYGS---VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
Y +++LY V K E ++ R + M+ + G E
Sbjct: 681 DVYTSNCMINLYSQRSMVRKAEAIFESMKQRRE----ANEFTFAMMLCMYKKNGRFEEAT 736
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
+I ++ ++ DP N ++ Y +G F +A F ++ G +P+ +++++L
Sbjct: 737 QIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSLG 793
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 130/319 (40%), Gaps = 77/319 (24%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD 175
L++ R++ A+E+++W ++G + L+ I +++ ++ G A + SL D +
Sbjct: 160 LKEQTRWERAVEIFEWFKSKG-CYELNV----IHYNIMLRILGKACKWRYVQSLWDEMIR 214
Query: 176 RRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ + YG L++ Y + ++ +A + KM G + +++ +Y K +E+ +
Sbjct: 215 KGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQK 274
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
E + W SC K D V + T++TM
Sbjct: 275 AEEF---------------FKKW--SCDEN-------------KADSHVCLSSYTYNTMI 304
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
Y K GQ+++A E+ +R+ V ++ ++ +YG+ G+ EV +
Sbjct: 305 DTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSL---------- 354
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ + +H + D R N+++S + K + ++A +
Sbjct: 355 MKTMKFHC--------------------------APDTRTYNILISLHTKNNDIERAGTY 388
Query: 410 FNSIIEEGGKPNSTSWETL 428
F + G KP+ S+ TL
Sbjct: 389 FKEMKGAGLKPDPVSYRTL 407
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
++N Y + M AE + + M+ + A + + +M+ +Y K ++E + +M+E
Sbjct: 687 CMINLYSQRSMVRKAEAIFESMKQRREA-NEFTFAMMLCMYKKNGRFEEATQIAKQMREM 745
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
I D SYN L G ++ F+ M V + P+ +TF ++ T+ IK+G +K
Sbjct: 746 RILTDPLSYNSVLGLYALDGRFKEAVETFKEM-VSSGIQPDDSTFKSLGTILIKLGMSKK 804
Query: 301 AEESLRRVE 309
A +R++E
Sbjct: 805 A---VRKIE 810
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 52/297 (17%), Positives = 108/297 (36%), Gaps = 40/297 (13%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F PDT R Y L++ + + A +M+ G + Y ++ +
Sbjct: 360 FHCAPDT----RTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRH 415
Query: 226 EYDEVESMVSEMKEKGIRLDVYS----------------------------------YNI 251
E E +++EM + + +D Y+ Y+
Sbjct: 416 MVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFKRFHVAGNMSSEGYSA 475
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ + G +G + E VF + + ++ M Y EKA E + S
Sbjct: 476 NIDAYGERGYLSEAERVF--ICCQEVNKRTVLEYNVMIKAYGISKSCEKACELFESMMSY 533
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
D+ Y+ L+ + S ++ R + Y A+ISS ++G +
Sbjct: 534 GVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 593
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
E++++E + D + ++++ + GN +A ++ ++ E G NS + +L
Sbjct: 594 EEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPENSVIYNSL 650
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L +++ +G A+ YNV++ + K D+VE ++ EM + +R D++S+N +++
Sbjct: 85 LFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYA 144
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
E+ VF MK V P+ T++T+ M+ + ++A E + D
Sbjct: 145 MSRKPERGLQVFSNMKA-AGVLPDIVTYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDF 203
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y L+S+YG G + +++ + + Y ++IS+ G +E K F +
Sbjct: 204 FVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQ 263
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
+ D + N M+ Y K G + A + + +G PN S+ + EG +
Sbjct: 264 MEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGH 323
Query: 438 ILEALSC 444
+ EAL+
Sbjct: 324 VDEALAA 330
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D VY L++ Y +A + +A L+ +++ +G+ + + Y +++ ++ +E
Sbjct: 202 DFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHF 261
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S+M+ G R DV+ N + + G + + + V PN +++ + ++
Sbjct: 262 SQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTA-QGVCPNRASYAIIVEGFLH 320
Query: 295 MGQVEKA 301
G V++A
Sbjct: 321 AGHVDEA 327
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 113/260 (43%), Gaps = 1/260 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V+ L + + NA +M+D G+ N ++ + D + EM
Sbjct: 170 VFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREM 229
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ I + Y+ N+ + +C G +K VFE M +PN +++T+ Y G
Sbjct: 230 RRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGT-MGFSPNVASYNTLIAGYCNKGL 288
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ A + +E D V ++ L++ + VGK +E +++ + + T + Y+
Sbjct: 289 LSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNI 348
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I+ ++ G+ E ++FEE + D N ++ KEG KA + E+G
Sbjct: 349 LINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKG 408
Query: 418 GKPNSTSWETLAEGHIRERR 437
PN++++ L G +++
Sbjct: 409 LVPNASTFSALIYGQCVQKQ 428
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 152/348 (43%), Gaps = 20/348 (5%)
Query: 98 EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVH 157
E+GG + ++ V+ K R A++V+D M +GE A+ + + +
Sbjct: 173 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE-----VKPEAVMYNALIGGY 227
Query: 158 GVASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
D L D + +R V Y L++A A L+++M KG A
Sbjct: 228 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 287
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
YN+++ + K + + M +G+R V +Y + + +G ++ + +F+
Sbjct: 288 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFD- 346
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
V + + P+ ++ + + G +++A E + +E + D V Y+ L+ +G
Sbjct: 347 EAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLG 406
Query: 332 KKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+ +E ++ + R + P + Y+ +IS + GD++ +I E ++ ++P +
Sbjct: 407 RVDEARKLIDEMTERGIQPDLVT--YNTLISGYSMKGDVKDALRIRNEMMN--KGFNPTL 462
Query: 390 A--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
N ++ K G D AE ++E G P+ +++ +L EG E
Sbjct: 463 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 8/269 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKG-YAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
YG +++ + + A + D+M KG ++ YN ++ Y + D
Sbjct: 183 TYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDR 242
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQG-STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
M E+G+ + V +YN+ + + G TE E V E+ K + P+ T++ + + K
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG--KGLAPDVFTYNILINGHCKE 300
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
G V+KA E + R V Y L+ G+ +E ++++ + R + P + +
Sbjct: 301 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL--V 358
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+A+I+S + G+I+ +I E + + D N +M G D+A + +
Sbjct: 359 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 418
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
E G +P+ ++ TL G+ + + +AL
Sbjct: 419 TERGIQPDLVTYNTLISGYSMKGDVKDAL 447
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 16/260 (6%)
Query: 192 RGNAELLIDKMRD----KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG-IRLDV 246
RG + +D MR+ G A + Y +++ + K+ DE + EM KG ++ +
Sbjct: 158 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 217
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
YN + QG + ++ V++ V T++ + G+ +A E +
Sbjct: 218 VMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 276
Query: 307 RVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISS 361
+ + D Y+ L++ + G+V K E++ N+ R GV T + Y A+I +
Sbjct: 277 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE--NMSRR---GVRATVVTYTALIYA 331
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L++ G ++ +K+F+E + D + N +++ + GN D+A + ++ P+
Sbjct: 332 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 391
Query: 422 STSWETLAEGHIRERRILEA 441
++ TL G R+ EA
Sbjct: 392 DVTYNTLMRGLCLLGRVDEA 411
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA- 301
R + +YN ++ S+G + + M+ + PN T+ T+ + + K+G+V++A
Sbjct: 142 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 201
Query: 302 ---EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPGVTNLGYH 356
+E L + E + + V Y+ L+ Y GK + +YR + R V +T Y+
Sbjct: 202 KVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGV--AMTVATYN 256
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ +L G ++ EE + D N++++ + KEGN KA F ++
Sbjct: 257 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 316
Query: 417 GGKPNSTSWETL 428
G + ++ L
Sbjct: 317 GVRATVVTYTAL 328
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 4/267 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG+LLN Y+ A ++ +D M + G + +N+ + Y K D+ +
Sbjct: 276 DCYTYGSLLN-YLCALSEMHS--FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIF 332
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M++ G+ +V +Y + + G + E F M +++ V PN F+++
Sbjct: 333 NKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM-INEGVTPNIVVFNSLVYGLCT 391
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+ + E+AEE + + + + V ++ L+ +VG+ E R+ +L V
Sbjct: 392 VDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFS 451
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +IS G + EK+F+ +S+ S N ++ Y D A F ++
Sbjct: 452 YTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREML 511
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
+G P ++ T+ G + +R EA
Sbjct: 512 RKGVTPGVVTYNTILHGLFQTKRFSEA 538
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 132/304 (43%), Gaps = 51/304 (16%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ +A++ AE + +M D G ++ YN ++ Y+ I ++ EV M+ +M
Sbjct: 210 YTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMS 269
Query: 239 EKGIRLDVYSY--------------------------------NIWLSSCGSQGSTEKME 266
+G++ D Y+Y NI+ S+ G +K
Sbjct: 270 ARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 329
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
+F M+ ++PN + + K+G+V+ AE ++ + + V ++ L+
Sbjct: 330 DIFNKMR-QHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYG 388
Query: 327 YGSVGK----KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDI-EGMEKI-FEEWLS 380
+V K +E VY + + + + P + ++ +I +L +G + EG I E +
Sbjct: 389 LCTVDKWERAEELVYEMLD--QGICPNA--VFFNTLICNLCNVGRVMEGRRLIDLMEHVG 444
Query: 381 VKS---SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
V+ SY P ++S Y G D+AE F+ ++ G P ++ TL G+ R
Sbjct: 445 VRPDAFSYTP-----LISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499
Query: 438 ILEA 441
I +A
Sbjct: 500 IDDA 503
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 9/218 (4%)
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD--KAVNPNWTTF 285
+ ++ ++ M E G D SY+I L ++ E+ + +M D ++ PN T+
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-- 343
+T+ K ++AE +++ + Y+ L+ Y S+GK +EV ++
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
R + P G S L + + M + + S D I N+ S Y K G
Sbjct: 271 RGLKPDCYTYG-----SLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMI 325
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
DKA FN + + G PN ++ L + + R+ +A
Sbjct: 326 DKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 363
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+ Y A +A L +M KG + YN ++ + K + E + + M
Sbjct: 487 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 546
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G + D+Y+YNI L+ ++ +F+ + K + N TF+ M +K G+
Sbjct: 547 NSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL-CSKGLQLNIITFTIMIGALLKGGRK 605
Query: 299 EKA 301
E A
Sbjct: 606 EDA 608
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 113/272 (41%), Gaps = 40/272 (14%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AE L+ +M D+G +++ +N ++ + E ++ M+ G+R D +SY +S
Sbjct: 398 AEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLIS 457
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
G T++ E VF+ M V ++P T++T+ Y +++ A R + +
Sbjct: 458 GYCLAGRTDEAEKVFDGM-VSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVT 516
Query: 315 RDRVPYHYLL-------------SLYGSV---GKKEEVY----------------RVWNL 342
V Y+ +L LY ++ G K ++Y + +
Sbjct: 517 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKM 576
Query: 343 YRSVFPGVTNLG---YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LMMSWY 397
++S+ L + MI +L + G E +F + + P + L+
Sbjct: 577 FQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPA--NGLVPNVVTYRLVAENL 634
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
++EG+ ++ ++ F+++ + G PNS L
Sbjct: 635 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 666
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/172 (16%), Positives = 75/172 (43%), Gaps = 3/172 (1%)
Query: 160 ASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
+ A++ +L++ + T D Y +LN ++ A + + KG ++ + + +M
Sbjct: 536 SEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIM 595
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ +K ++ + + + G+ +V +Y + + +GS E+ + +F M+
Sbjct: 596 IGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAME-KNG 654
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
PN + + + G + +A L +++ R + L+S++ S
Sbjct: 655 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTS 706
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L +++ +G A+ YNV++ + K D+VE ++ EM + +R D++S+N +++
Sbjct: 85 LFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYA 144
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
E+ VF MK V P+ T++T+ M+ + ++A E + D
Sbjct: 145 MSRKPERGLQVFSNMKA-AGVLPDIVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDF 203
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y L+S+YG G + +++ + + Y ++IS+ G +E K F +
Sbjct: 204 FVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQ 263
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
+ D + N M+ Y K G + A + + +G PN S+ + EG +
Sbjct: 264 MEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGH 323
Query: 438 ILEALSC 444
+ EAL+
Sbjct: 324 VEEALAA 330
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 24/264 (9%)
Query: 182 LLNAYVRARMRGNAELLI--------DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
+L RAR+ +AE L DK+R PYN M+ Y + K + +
Sbjct: 2 VLGILSRARLIEDAEELFQWIKLQDWDKLR---------PYNAMIAAYYQAKRPKDAWDV 52
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+M +GI D +Y+I +S G G ++ +F +K + V +++ + +
Sbjct: 53 YHQMLAEGIDPDEVTYDILVSGSGKNGY--PIDRLFLEIK-SRGVALTLRSYNVVICAFT 109
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVT 351
K G ++K EE +R + + D ++ L++ Y K E +V++ ++ V P +
Sbjct: 110 KEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIV 169
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y +I +R + ++FEE + K D + +L++S Y K G A F+
Sbjct: 170 T--YTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFH 227
Query: 412 SIIEEGGKPNSTSWETLAEGHIRE 435
+ EG +PN ++ +L H+ +
Sbjct: 228 RLQLEGHRPNIVTYTSLISAHLHK 251
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D VY L++ Y +A + +A L+ +++ +G+ + + Y +++ ++ +E
Sbjct: 202 DFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHF 261
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S+M+ G R DV+ N + + G + + + V PN +++ + ++
Sbjct: 262 SQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTA-QGVCPNRASYAIIVEGFLH 320
Query: 295 MGQVEKA 301
G VE+A
Sbjct: 321 AGHVEEA 327
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 126/288 (43%), Gaps = 6/288 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++N + +A+ L+ KG+ +N ++ Y K + D +V M
Sbjct: 428 YNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMW 487
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G+ DV +YN L+ G E + G F+LM ++K PN T++ + + K +V
Sbjct: 488 NHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLM-MEKGCVPNIITYNILTESFCKARKV 546
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG-YHA 357
E+A + ++++ D V + L+ + G + Y+++ + + Y+
Sbjct: 547 EEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNI 606
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
MI++ A ++ EK+F + S D +M+ + K GN + +F IE+G
Sbjct: 607 MINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKG 666
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVI 465
P+ T++ + +RR+ EA+ G K P+ VN I
Sbjct: 667 LIPSLTTFGRVLNCLCLKRRVHEAV----GIIHLMVHKGIVPEVVNTI 710
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 114/267 (42%), Gaps = 43/267 (16%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++ + R A L ++M G + +N ++ + E E +++++
Sbjct: 184 YCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVL 243
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKM---EGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
++G+ ++++ NI++ QG ++ E + L V + + P+ T++T+ K
Sbjct: 244 KRGVSPNLFTVNIFI-----QGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKN 298
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+V +AE LR++ + G + + + Y S+ G LG
Sbjct: 299 FKVVEAEHYLRKMVNE-------------------GYEPDGFT----YNSIIDGYCKLGM 335
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ R G +G ++ +S+Y I L ++G+ D+A FN +E
Sbjct: 336 MQNADQILRDGAFKG-------FVPDESTYCSLINGL-----CQDGDIDRAINVFNEAME 383
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
+G KPN TL +G ++ IL+AL
Sbjct: 384 KGLKPNLVLCNTLVKGLSQQGLILQAL 410
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/317 (18%), Positives = 125/317 (39%), Gaps = 14/317 (4%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y L+ + AE + KM ++GY YN ++ Y K+
Sbjct: 283 PDVI----TYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQN 338
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ ++ + KG D +Y ++ G ++ VF ++K + PN +T+
Sbjct: 339 ADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFN-EAMEKGLKPNLVLCNTLV 397
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV--YRVWNLYRSVF 347
+ G + +A + + + D Y+ +++ +G + + + +
Sbjct: 398 KGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHL 457
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P V ++ +I + ++ +I + + S D N +++ K G ++
Sbjct: 458 PDV--FTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVM 515
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINF 467
F ++E+G PN ++ L E + R++ EAL+ ++ K P VN
Sbjct: 516 GTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIE----EMQNKGLTPDVVNFGTL 571
Query: 468 FKACEEESDM-GSKEAF 483
K + D+ G+ + F
Sbjct: 572 MKGFCDNGDLDGAYQLF 588
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 133/322 (41%), Gaps = 53/322 (16%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +LL AY A A+ ++ +M G + + +N ++ ++ +E E MV+ M
Sbjct: 32 TYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAEKMVAYM 91
Query: 238 KEKGIRLDVYSYNIWLSSCGS-QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+E G+ DV +Y+ L + +G K E V E M D V PN T++ + Y+K G
Sbjct: 92 QEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARD-GVAPNSYTYNYLIEGYVKAG 150
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+++ AE+ L R+ R+V T++ Y
Sbjct: 151 EMDWAEDVLERM-----------------------------------RTVGLAPTSMNYC 175
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII-- 414
++ + R D G EKI + + ++ +M+ Y K G+ + AE ++
Sbjct: 176 VLMDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAV 235
Query: 415 --EEGG-----KPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINF 467
EEGG +PN ++ TL ++ R L A + +G A W P NVI F
Sbjct: 236 AEEEGGGSKDCEPNVHTYSTLM--NVYARAGLAAGA--EGVLTRMTAAGWAP---NVITF 288
Query: 468 FKACEEESDMGSKEAFVALLRQ 489
S G E +L++
Sbjct: 289 TTLMTAYSRAGDPEGAELVLKR 310
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 8/201 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ YV+A AE ++++MR G A S+ Y V+M Y + ++ E ++ M
Sbjct: 138 TYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRM 197
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--------DKAVNPNWTTFSTMA 289
K++G++ +V + +++ +G E EGV M K PN T+ST+
Sbjct: 198 KKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLM 257
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+Y + G AE L R+ + + + + L++ Y G E V +
Sbjct: 258 NVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVS 317
Query: 350 VTNLGYHAMISSLARIGDIEG 370
L Y+ ++S+ +R+G EG
Sbjct: 318 PNVLTYNTLLSATSRMGLREG 338
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+N Y RA + AE ++ +M G+A + + + +MT Y + + + E ++ M
Sbjct: 252 TYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM 311
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G+ +V +YN LS+ G E G E + + + + TM K G
Sbjct: 312 EAAGVSPNVLTYNTLLSATSRMGLRE---GEVEERRAKRVLQ----VYDTMRRSAGKGGG 364
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK--EEVYR-VWNLYRSVFP--GVTN 352
+EKA D Y LL+ K+ +EVY+ + +R + P ++
Sbjct: 365 LEKAP-------------DEATYTVLLTCLLRFPKRLTKEVYKLILEDWRRLVPTRNRSD 411
Query: 353 LGYHAMISSLARIGDIEGMEKIFEE 377
Y + I+ LA +GD E M +F E
Sbjct: 412 RNYQSFITVLAAMGDWEEMATVFRE 436
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 109/277 (39%), Gaps = 41/277 (14%)
Query: 173 LKDRRVYGALLNAY-VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y LL Y + G AE ++++M G A +S YN ++ Y+K E D E
Sbjct: 97 LADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAE 156
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ M+ G+ +Y + + + + E + + MK + V N F+T+
Sbjct: 157 DVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMK-KEGVQANVQVFTTLMNA 215
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
Y K G VE AE L R +L++ G + P V
Sbjct: 216 YAKRGDVEGAEGVLAR---------------MLAVAEEEGGGS---------KDCEPNVH 251
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAF 409
Y +++ AR G G E + + + + P + +M+ Y + G+ + AE
Sbjct: 252 T--YSTLMNVYARAGLAAGAEGVLTRMTA--AGWAPNVITFTTLMTAYSRAGDPEGAELV 307
Query: 410 FNSIIEEGGKPNSTSWETLA---------EGHIRERR 437
+ G PN ++ TL EG + ERR
Sbjct: 308 LKRMEAAGVSPNVLTYNTLLSATSRMGLREGEVEERR 344
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 138/330 (41%), Gaps = 21/330 (6%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
K+L + RR++ A+ ++ M +G ++ S+A I HG+ ++ +
Sbjct: 448 CTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALI--------HGLCEGKNMK-GATE 498
Query: 172 TLK---------DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
L+ D Y ++ + A L D M KG+ + +N ++ Y
Sbjct: 499 VLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYC 558
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPN 281
+ + +E ++ +MK +G++ DV SY + C ++ + E + ELM + PN
Sbjct: 559 DLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMAC--GLKPN 616
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
++ + Y + G + A L +ES V Y L+ G +E ++
Sbjct: 617 AVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFE 676
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
R V +GY MI L +IG ++ FEE S + +M Y K G
Sbjct: 677 QSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSG 736
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
N ++A F+ ++ G P++ S+ TL G
Sbjct: 737 NNEEASKLFDEMVSSGIVPDNVSYNTLVTG 766
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV--ES 310
L+ G+ G+T K VF+ M+ K V PN ++++M K+G+V+ + L +
Sbjct: 203 LARTGNLGATCK---VFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAG 259
Query: 311 RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDI 368
VPY+ L+ G+ +E R+ V P + G +I+ L R
Sbjct: 260 LQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGI--LINGLKRSDRF 317
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ + E + + + I N ++ W+ ++G+F +A F+ ++ + K + ++ +
Sbjct: 318 GEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLI 377
Query: 429 A-----EGHI-RERRILEAL 442
A EG + R RILE +
Sbjct: 378 ARALCKEGEMERAERILEEM 397
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 118/275 (42%), Gaps = 16/275 (5%)
Query: 195 AELLIDKMRDKGYAVHSLPYN-VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
AE ++++M G +HS +N V+ L + + V ++SEM ++G++ + + +
Sbjct: 390 AERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPN----DALM 445
Query: 254 SSCG---SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
++C QG + L ++K + N T + + + ++ A E LR + +
Sbjct: 446 TACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVN 505
Query: 311 RITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYHAMISSLARIGDIE 369
+ D + Y+ ++ K EE ++ + + R F + ++++I + +G +E
Sbjct: 506 KGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYM-FNSIIHAYCDLGKME 564
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
+ + D ++ Y K + KA + N ++ G KPN+ + L
Sbjct: 565 EALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALI 624
Query: 430 EGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNV 464
G+ R I A+ L + +S +P NV
Sbjct: 625 GGYGRNGNISGAIGVL------DTMESIGIQPTNV 653
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 120/266 (45%), Gaps = 7/266 (2%)
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
G+LLN + + A L+D M G+ + + YN ++ K ++ + + M++
Sbjct: 153 GSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK 212
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
KGIR D +YN +S + G + M V + ++PN F+ + ++K G +
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDM-VKRKIDPNVIFFTALIDTFVKEGNLL 271
Query: 300 KAEESLRRVESRITGRDRVPYHYLLS---LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+A + + R + Y+ L++ ++G +G + ++ + + + FP V Y+
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM-VSKGCFPDVVT--YN 328
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I+ + +E K+F E D N ++ Y + G + A+ FN +++
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 388
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G P+ ++ L + +I +AL
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKAL 414
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 122/298 (40%), Gaps = 52/298 (17%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAED------- 164
V+ L K R +ALEV+ M +G R +DA LI+ + D
Sbjct: 190 VINGLCKNRDLNNALEVFYCMEKKGIR-----ADAVTYNTLISGLSNSGRWTDAARLLRD 244
Query: 165 -----------FFLSLPDT-------LKDRRVY---------------GALLNAYVRARM 191
FF +L DT L+ R +Y +L+N +
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 192 RGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
G+A+ + D M KG + YN ++T + K K ++ + EM +G+ D ++YN
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ G + VF M VD V+P+ T++ + G++EKA + ++
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRM-VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS 423
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-PGV--TNLGYHAMISSLARIG 366
D + Y+ ++ + + +++ W L+RS+ GV + Y MIS L R G
Sbjct: 424 EMDVDIITYNIIIQ---GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 114/263 (43%), Gaps = 5/263 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ + +A L+ M + + + + ++ ++K E ++
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM + + +V++YN ++ G + +F+LM V K P+ T++T+ T + K
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM-VSKGCFPDVVTYNTLITGFCK 336
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN-- 352
+VE + + + D Y+ L+ Y GK +V+N R V GV+
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN--RMVDCGVSPDI 394
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+ ++ L G IE + E+ + D N+++ + +A F S
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 413 IIEEGGKPNSTSWETLAEGHIRE 435
+ +G KP++ ++ T+ G R+
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRK 477
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ Y +A A+ + ++M D G + + YN+++ + ++ MV
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQG--STEKMEGVFELMK--VDKAVNPNWTTFSTMAT 290
++++ + +D+ +YNI + QG T+K++ + L + K V P+ + TM +
Sbjct: 418 EDLQKSEMDVDIITYNIII-----QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 291 MYIKMGQVEKAEESLRRVE 309
+ G +A++ RR++
Sbjct: 473 GLCRKGLQREADKLCRRMK 491
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 125/260 (48%), Gaps = 9/260 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+++ + M A L+ +M+ G + + + YNV++ E ++ + ++ +M
Sbjct: 205 YNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDML 264
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G+ + VY+Y+ + +G E+ + E M AV P T++T+ K G+V
Sbjct: 265 RLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAV-PTVVTYNTIMYGLCKWGRV 323
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
A + L + ++ D V Y+ L+ Y +G E + ++ YRS+ P V Y+
Sbjct: 324 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVT--YN 381
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSII 414
+I L R+GD++ ++ +E +K DP + + + K GN A+ F+ ++
Sbjct: 382 TLIDGLCRLGDLDVAMRLKDEM--IKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEML 439
Query: 415 EEGGKPNSTSWETLAEGHIR 434
G +P+ ++ T G ++
Sbjct: 440 NRGLQPDRFAYITRIVGELK 459
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 119/291 (40%), Gaps = 9/291 (3%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ + D Y L+ Y R G A LL ++R + A + YN ++ ++ + D
Sbjct: 337 NLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVA 396
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ EM + G DV+++ ++ G+ + +F+ M +++ + P+ + T
Sbjct: 397 MRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEM-LNRGLQPDRFAYITRIV 455
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFP 348
+K+G KA + +R D + Y+ + +G +E + LY + P
Sbjct: 456 GELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVP 515
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
++ Y ++I + G + +F E LS +++ Y G A
Sbjct: 516 D--HVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAIL 573
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
F + E+G PN ++ L G + R++ +A + FA AK P
Sbjct: 574 HFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYN----FFAEMQAKGISP 620
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 179 YGALLNAY-VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+++Y VR R++ A L +M +KG + + YN ++ K+++ D+ + +EM
Sbjct: 555 YTVLIHSYAVRGRLKL-AILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEM 613
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ KGI + Y+Y I ++ + G ++ +++ M +D+ + P+ T ++
Sbjct: 614 QAKGISPNKYTYTILINENCNLGHWQEALRLYKDM-LDREIQPDSCTHRSL 663
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 166/420 (39%), Gaps = 78/420 (18%)
Query: 34 LHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFERRP-MIKWNAIFRKLSLMDNPQLGSAS 92
L Q+S + H + L V+K S ++P I +N + L+++ +L +A
Sbjct: 28 LRQKSKLDHALRLLEVMKES------------GKKPDEILYNCLVN--GLVNSGRLEAAE 73
Query: 93 -VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ-- 149
+L+D ++ S ++KE R + +++ M ++GE +A IQ
Sbjct: 74 KILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGY 133
Query: 150 ---------LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
L+L ++ GV A KD Y + Y + + + E L+D
Sbjct: 134 GRKGLFKEALELYDEMDGVGCA-----------KDVHTYNIAIAMYGKRGLLEDMERLLD 182
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M KG + YN ++ +Y K + + ++ EM E G R ++++YNI LSS +
Sbjct: 183 EMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQ 242
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
S + +FE +K K V PN T+S M
Sbjct: 243 SVAEATQLFENLK-SKGVVPNIVTYSAM-------------------------------- 269
Query: 321 HYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
LSLYG G E ++W+ + P + + Y +I S G + F++
Sbjct: 270 ---LSLYGRHGLYTEAAKLWDEMIEAGCIPCI--IAYSGLIESYGHHGMYQEALACFQDM 324
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
D +I +M Y K G +AE + + +EG P+ ++ L R+
Sbjct: 325 RKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 108/245 (44%), Gaps = 2/245 (0%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
L +M G + Y V++ Y++ K + D ++ MKE G + D YN ++
Sbjct: 4 LFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGL 63
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
+ G E E + + MK DK V+ N T++ + Y G+++ + + ++ + +
Sbjct: 64 VNSGRLEAAEKILDDMKQDK-VSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPN 122
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y+ L+ YG G +E +++ V Y+ I+ + G +E ME++ +
Sbjct: 123 SWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLD 182
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
E + D N ++ Y K+ F KA + E G +PN ++ + +E+
Sbjct: 183 EMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQ 242
Query: 437 RILEA 441
+ EA
Sbjct: 243 SVAEA 247
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 120/267 (44%), Gaps = 6/267 (2%)
Query: 178 VYGALLNAYVRARMRGNAEL-LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y +++ Y+R + + + L L++ M++ G + YN ++ + + E ++ +
Sbjct: 19 TYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDD 78
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
MK+ + ++ +Y + + G + +F+ MK DK +PN T++ + Y + G
Sbjct: 79 MKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMK-DKGESPNSWTYNALIQGYGRKG 137
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++A E ++ +D Y+ +++YG G E++ R+ + + + Y+
Sbjct: 138 LFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYN 197
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSII 414
++ A+ +I E ++ Y P I N+M+S KE + +A F ++
Sbjct: 198 TLLDVYAKKSYFVKAHEILREM--TEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLK 255
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
+G PN ++ + + R EA
Sbjct: 256 SKGVVPNIVTYSAMLSLYGRHGLYTEA 282
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +++ L G +E EKI ++ K S + ++ Y G F +
Sbjct: 56 YNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMK 115
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEAL 442
++G PNS ++ L +G+ R+ EAL
Sbjct: 116 DKGESPNSWTYNALIQGYGRKGLFKEAL 143
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 1/233 (0%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN+M+ K + + S+ ++MKE G D+ +YN + G G ++ +FE MK
Sbjct: 59 YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 118
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D +P+ T++ + + K ++ KA E L +++ + V Y + + G
Sbjct: 119 -DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+E + + R V Y ++I + + G++ K+ EE L + +
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ +EG +AE F +++ G PN ++ L G I+ + + A LK
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 290
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 128/304 (42%), Gaps = 9/304 (2%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
I +D + K + A F + + D Y +L++ + + + + ++M+D
Sbjct: 61 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
+ YN ++ + K + + + EMK G++ +V +Y+ ++ + +G ++
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
F M+ A+ PN T++++ K G + +A + + + + V Y LL
Sbjct: 181 IKFFVDMR-RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239
Query: 326 LY---GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
G + + EEV+R L V P Y A++ + ++E + I +E
Sbjct: 240 GLCEEGRMKEAEEVFRAM-LNAGVAPNQET--YTALVHGFIKAKEMEYAKDILKEMKEKC 296
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
D + ++ E ++A+ I E G N+ + TL + + + + EAL
Sbjct: 297 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356
Query: 443 SCLK 446
+ L+
Sbjct: 357 TLLE 360
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 109/278 (39%), Gaps = 26/278 (9%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ++A+ + M A MR + Y ++ K E +V E+
Sbjct: 163 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 222
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ GI+L+V +Y L +G ++ E VF M ++ V PN T++ + +IK +
Sbjct: 223 LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAM-LNAGVAPNQETYTALVHGFIKAKE 281
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLL-------------SLYGSVGKKEEVYRVWNLYR 344
+E A++ L+ ++ + D + Y +L L G + K+ + +Y
Sbjct: 282 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI-KESGINTNAVIYT 340
Query: 345 SVFPGVTNLGYHA-----------MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
++ G ++ L + E +K+F+E L D +
Sbjct: 341 TLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 400
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+ +K GN +A + +IE G + + ++ L G
Sbjct: 401 IDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWG 438
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ L D+M DKG + Y ++ MK E ++ M E G+ LD+++Y +
Sbjct: 378 AKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIW 437
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR--I 312
G +K + + M + K V P+ + + Y +G+V++A E + R I
Sbjct: 438 GLSHSGQVQKARNLLDEM-IGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 496
Query: 313 TG 314
TG
Sbjct: 497 TG 498
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 9/261 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YGAL++ V A A + DKM ++G + YNV+M+ K + + ++
Sbjct: 411 DLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLL 470
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM ++ + D + + G+ ++ + +F+L +++ ++ + + M Y K
Sbjct: 471 VEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQL-TIERGIDTSVVECNAMIKGYCK 529
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
G + A +R+ + + D Y ++ Y R++ L ++ P V
Sbjct: 530 YGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVT 589
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFF 410
+ ++I+ R GD+ EK+FEE S ++P + +++ ++ KEG KA FF
Sbjct: 590 --FTSLINGFCRNGDLNRAEKVFEEMRSF--GFEPNVVTYTILIGYFCKEGKLTKACFFF 645
Query: 411 NSIIEEGGKPNSTSWETLAEG 431
++ PN ++ L G
Sbjct: 646 EQMLINKCIPNDATFNYLVNG 666
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 5/285 (1%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
L + L + YGA++NA+ + + L+ +M+++G AV +N ++ K
Sbjct: 263 LKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGC 322
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
E V M E G D+ +YN ++ S+G + E + E + + + PN +++
Sbjct: 323 EIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLE-HAIRRGLFPNKFSYT 381
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYR 344
+ + K G+ +A E L + R D + Y L+ G+ + V + + R
Sbjct: 382 PLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMER 441
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ P N+ Y+ ++S L + G +++ E L + D + ++ +++ GN D
Sbjct: 442 GILPD-ANI-YNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLD 499
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAF 449
+A+ F IE G + + +G+ + + +AL C K F
Sbjct: 500 EAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMF 544
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 119/261 (45%), Gaps = 17/261 (6%)
Query: 186 YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD 245
YVRA +ELLI+ M ++G+ + + Y ++ + E D ++ +M E+GI D
Sbjct: 393 YVRA-----SELLIE-MSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPD 446
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
YN+ +S +G + + M +D+ V P+ +T+ +I+ G +++A++
Sbjct: 447 ANIYNVLMSGLCKKGRFPAAKQLLVEM-LDQNVTPDAFVNATLVDGFIRHGNLDEAKKLF 505
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN---LGYHAMISSL 362
+ R V + ++ Y G + ++ +F GV + Y +I
Sbjct: 506 QLTIERGIDTSVVECNAMIKGYCKYGMMNDALLC---FKRMFNGVHSPDEFTYSTIIDGY 562
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
+ D+ G ++F L +K + P + +++ + + G+ ++AE F + G +P
Sbjct: 563 VKQNDLRGALRMF--GLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEP 620
Query: 421 NSTSWETLAEGHIRERRILEA 441
N ++ L +E ++ +A
Sbjct: 621 NVVTYTILIGYFCKEGKLTKA 641
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 109/261 (41%), Gaps = 3/261 (1%)
Query: 175 DRRVYGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
D Y L+N + ++R ELL +R +G + Y ++ + K EY +
Sbjct: 341 DMATYNTLINGSCSKGKVREAEELLEHAIR-RGLFPNKFSYTPLIHAFSKNGEYVRASEL 399
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EM E+G LD+ +Y + G + V + M +++ + P+ ++ + +
Sbjct: 400 LIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKM-MERGILPDANIYNVLMSGLC 458
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G+ A++ L + + D L+ + G +E +++ L + +
Sbjct: 459 KKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVV 518
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+AMI + G + F+ + S D + ++ YVK+ + A F +
Sbjct: 519 ECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLM 578
Query: 414 IEEGGKPNSTSWETLAEGHIR 434
+++ KPN ++ +L G R
Sbjct: 579 LKKTCKPNVVTFTSLINGFCR 599
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 107/278 (38%), Gaps = 34/278 (12%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
LI+K KG + + YN ++ Y K + + + E+K KG V +Y +++
Sbjct: 224 LIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFC 283
Query: 258 SQGSTEKMEGVFELMK----------------------------------VDKAVNPNWT 283
+G E ++ + MK ++ P+
Sbjct: 284 KKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMA 343
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
T++T+ G+V +AEE L R ++ Y L+ + G+ +
Sbjct: 344 TYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEM 403
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+ + Y A++ L G+++ + ++ + D I N++MS K+G F
Sbjct: 404 SERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRF 463
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A+ ++++ P++ TL +G IR + EA
Sbjct: 464 PAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEA 501
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 123/272 (45%), Gaps = 5/272 (1%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D + L++A RA A L+D M +KG + +N ++ K + +D+ +
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAK 247
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ M + + DV S+NI + G E+ ++ M+ + V P+ +FS + +
Sbjct: 248 EVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQ-QRGVTPDVVSFSCLIGL 306
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
+ G+++ A LR ++ D V Y ++ + G E RV + + P
Sbjct: 307 FSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPD 366
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
V Y+ +++ L + + E++ E + D ++ Y ++GNF+KA
Sbjct: 367 VVT--YNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQL 424
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F++++ + +P+ ++ +L +G R+ + +A
Sbjct: 425 FDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKA 456
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 112/235 (47%), Gaps = 5/235 (2%)
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
V++ N+M+ Y K E+D+ ++++SEM+++ + DV ++N+ + + G + +
Sbjct: 155 VNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
+ M +K + P TF+++ K + +KA+E R ++ D ++ L+ +
Sbjct: 215 VDSM-ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC 273
Query: 329 SVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
VG+ EE + + R V P V + + +I + G ++ E + D
Sbjct: 274 RVGEVEEAMKFYKEMQQRGVTPDVVS--FSCLIGLFSTRGKMDHAAAYLREMKGLGLVPD 331
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
I +++ + + G+ +A + ++ G P+ ++ TL G ++ R+L+A
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDA 386
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 139/313 (44%), Gaps = 11/313 (3%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D +Y ++ + RA A + D+M G + YN ++ K + E
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEE 388
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+++EMKE+G+ D+ ++ + G+ EK +F+ + + + + P+ ++++
Sbjct: 389 LLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTL-LHQRLRPDVVAYNSLIDGM 447
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGV 350
+ G + KA E + +R + V Y L+ + G+ EE + + + + P +
Sbjct: 448 CRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNI 507
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y+++I R G+++ ++ ++ + D N ++ Y+KE N A F
Sbjct: 508 --MTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVF 565
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA 470
N + +E +P++ ++ + G + + EA K A G + R +++IN
Sbjct: 566 NIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK-KMGASGIEPDRYTYMSLIN---- 620
Query: 471 CEEESDMGSKEAF 483
+ SKEAF
Sbjct: 621 -GHVTAGNSKEAF 632
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 143/324 (44%), Gaps = 13/324 (4%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQ-LDLIAKVH---GVASAEDFFLSLPDTLKDR 176
++ A+E +D M G + L + I+ I K G+ D PD +
Sbjct: 169 KFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIV--- 225
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+Y +++ + R+ A + +++ KG Y+++M + +E ++ +E
Sbjct: 226 -IYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNE 284
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M I DV ++NI + +G + +G+ ++M ++K V PN+ T++++ Y
Sbjct: 285 MMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIM-IEKGVEPNYATYNSLMNGYCLQN 343
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
+V +A + ++ + V Y+ L++ Y + +E +++ +R + P N
Sbjct: 344 KVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFN-- 401
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +IS L + G ++F++ + S D +++ K G D A F ++
Sbjct: 402 YNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQ 461
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
+ KPN +++ L + +I
Sbjct: 462 DSCLKPNLVTYDILIRAMYKSGKI 485
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 127/294 (43%), Gaps = 23/294 (7%)
Query: 179 YGALLNAYVRARMRGNAELL---IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ LL+A VR + G L I+ +R + H +N+++ + +++ D S++
Sbjct: 87 FDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFH---FNILINCFSRLQRVDFAFSVLG 143
Query: 236 EMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++ + G D +++ ++ C ME E+ V PN T++T+ + K
Sbjct: 144 KIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEM--VASGYQPNLHTYNTIIKGFCK 201
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPG 349
+G+ A L++++ D V Y+ ++ + K V +++ + V P
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIID---GLCKDRLVSEALDIFSEIKGKGVRPD 258
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
V Y ++ L E +F E +S+ D N+++ KEG +A+
Sbjct: 259 V--FTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGI 316
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVN 463
+IE+G +PN ++ +L G+ + ++ EA + F A K P V+
Sbjct: 317 IKIMIEKGVEPNYATYNSLMNGYCLQNKVFEA----RMVFDAMITKGCMPNVVS 366
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+N Y A ++ D M KG + + YN+++ Y K + DE + EM
Sbjct: 332 YNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMS 391
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+G+ + ++YN +S G + +F+ M+ + +P+ T + + K+G +
Sbjct: 392 FRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQA-QGCSPDLVTCTILLDSLCKLGYL 450
Query: 299 EKAEESLRRVESRITGRDRVPYHYLL-SLYGSVGKKEEVYR 338
+ A R ++ + V Y L+ ++Y K ++YR
Sbjct: 451 DNALRLFRAMQDSCLKPNLVTYDILIRAMY----KSGKIYR 487
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 42/266 (15%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++ + + A L+ KM G + YN ++ K + E + SE+K
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIK 251
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+R DV++Y+I + + E+ +F E+M ++ + P+ TF+ + K G
Sbjct: 252 GKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN--IMPDVVTFNILVDKLCKEGM 309
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+ +A+ ++ + + + Y+ L++ Y K E V++ + + P V
Sbjct: 310 LSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVV---- 365
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
SY N++++ Y K D+A F+ +
Sbjct: 366 ----------------------------SY-----NILINGYCKAQRIDEARELFDEMSF 392
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
G PN+ ++ TL G + R EA
Sbjct: 393 RGLIPNTFNYNTLISGLCQAGRHCEA 418
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 126/274 (45%), Gaps = 11/274 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ + +A L+++M+ KG + + Y +++ + K +E +++
Sbjct: 388 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 447
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM KG+ L+ YN +S+ + +F M K P+ TF+++
Sbjct: 448 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS-SKGCKPDIFTFNSLI---FG 503
Query: 295 MGQVEKAEESLRRVESRI---TGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
+ +V K EE+L + + + + Y+ L+ + G +E ++ N L+R
Sbjct: 504 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC--P 561
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ ++ Y+ +I +L R G+IE +FE+ +S + + N++++ + GN A F
Sbjct: 562 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 621
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+I G P+ ++ +L G + R EAL+
Sbjct: 622 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 655
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 127/294 (43%), Gaps = 40/294 (13%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ + + A ++D+M KG A++++ YN +++ K ++ + +M +M
Sbjct: 427 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 486
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
KG + D++++N + E+ G+++ M ++ + N T++T+ +++ G +
Sbjct: 487 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI-ANTITYNTLIHAFLRRGAM 545
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE----------------------- 335
++A + + + R D + Y+ L+ G E+
Sbjct: 546 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 605
Query: 336 ---VYRVWN-----------LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+ R N ++R + P + Y+++I+ L + G + +F++
Sbjct: 606 INGLCRTGNIQHALEFLRDMIHRGLTPDIVT--YNSLINGLCKTGRAQEALNLFDKLQVE 663
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
D N ++SW+ KEG FD A + ++ G PN +W L I+E
Sbjct: 664 GICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 717
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 136/337 (40%), Gaps = 10/337 (2%)
Query: 113 VKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT 172
+ L K R A ++ D M RG F ++ + + + ++ V A +P+
Sbjct: 294 IHGLCKMLRIHEAAKLVDRMLLRG--FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN- 350
Query: 173 LKDRRVYGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ ++ L+N YV R R+ ++ + M G YN ++ K
Sbjct: 351 -PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 409
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+++EM+ KG +V +Y I + +G E+ V + M K + N ++ + +
Sbjct: 410 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS-GKGLALNAVGYNCLISA 468
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV- 350
K +V+ A + S+ D ++ L+ V K EE ++ + GV
Sbjct: 469 LCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ--DMLLEGVI 526
Query: 351 -TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y+ +I + R G ++ K+ + L D N ++ + GN +K A
Sbjct: 527 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 586
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
F ++ +G PN+ S L G R I AL L+
Sbjct: 587 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 623
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 148/362 (40%), Gaps = 53/362 (14%)
Query: 104 LTKWELCRVVK---------ELRKF----RRYKHALEVYDWMNNR-GERFRLSASDAAIQ 149
+T ++LC++++ EL ++ + Y H +VY + ++ G DA +
Sbjct: 76 ITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALL- 134
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+ K G+ E F+ ++ Y RA + G A L+ MR V
Sbjct: 135 --MQMKQEGIVFRESLFI-------------LIMKHYGRAGLPGQATRLLLDMR----GV 175
Query: 210 HSL-----PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
+S YNV++ + + V ++ EM KGI VY++ + + + +
Sbjct: 176 YSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDS 235
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
+ + M V PN + T+ K+G+V + + L + D ++ +
Sbjct: 236 ACALLKDMTRHGCV-PNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAI 294
Query: 325 SLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ + E ++ + L R P + Y ++ L R+G ++ E + +
Sbjct: 295 HGLCKMLRIHEAAKLVDRMLLRGFTP--NSFTYGVLMHGLCRMGKVD------EARMLLN 346
Query: 383 SSYDPRIA--NLMMSWYVKEGNFDKAEAFFN-SIIEEGGKPNSTSWETLAEGHIRERRIL 439
+P + N +++ YV G D+A+A + S++ G P+ ++ TL G ++ ++
Sbjct: 347 KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLV 406
Query: 440 EA 441
A
Sbjct: 407 SA 408
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 7/163 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAE---LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D Y L+ A RA GN E L + M KG +++ N+++ +
Sbjct: 563 DDITYNGLIKALCRA---GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 619
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ +M +G+ D+ +YN ++ G ++ +F+ ++V+ + P+ T++T+ +
Sbjct: 620 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE-GICPDAITYNTLISW 678
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
+ K G + A L R + V ++ L+S + G +E
Sbjct: 679 HCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 123/289 (42%), Gaps = 9/289 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N + A+ ++++M D+G + +N ++ +E +
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLA 395
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KG+ DVY++NI +++ G +FE MK P+ T++ +
Sbjct: 396 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK-SSGCTPDEVTYNILIDHLCS 454
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
MG++ A + L +ES R V Y+ ++ + EE V++ + + +
Sbjct: 455 MGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVT 514
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR--IANLMMSWYVKEGNFDKAEAFFNS 412
++ +I L + I+ ++ E+ VK P N +++ Y K+GN KA +
Sbjct: 515 FNTLIDGLCKAKRIDDATELIEQM--VKEGLQPNNITYNSILTHYCKQGNIKKAADILET 572
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKP 461
+ G + + ++ TL G + R AL L+G K RP P
Sbjct: 573 MTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM----RIKGIRPTP 617
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 130/272 (47%), Gaps = 12/272 (4%)
Query: 178 VYGALLNAYVRARMRGNA-ELLIDKMRDKGYAVH--SLPYNVMMTLYMKIKEYDEVESMV 234
V + + +Y R R +A +L+++++ + + V ++ +N ++ + ++ + +ES+
Sbjct: 126 VVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVY 185
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM +GI+ DV + N + + + E M V P+ TTF+T+ +I+
Sbjct: 186 NEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS-SHGVAPDETTFTTLMQGFIE 244
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TN 352
G +E A ++ V + L++ Y +G+ E+ + + + + G
Sbjct: 245 EGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDA--LGYIQQEIADGFEPDQ 302
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFF 410
+ Y+ + L + G + K+ + L ++ +DP + N +++ K G D+A+
Sbjct: 303 VTYNTFVHGLCQNGHVSHALKVMD--LMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIV 360
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
N +++ G P++T++ TL + R+ EAL
Sbjct: 361 NQMVDRGCLPDTTTFNTLIVALSSQNRLEEAL 392
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 4/259 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ GNA L+++M G ++ YN ++ K +E E +
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF 500
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+M +GI ++N + C ++ + E + +++K + + PN T++++ T Y
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK--EGLQPNNITYNSILTHYC 558
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G ++KA + L + + D V Y L++ G+ + ++ R T
Sbjct: 559 KQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPK 618
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN-FDKAEAFFNS 412
Y+ +I SL R ++ +F E V D ++ + G +A F
Sbjct: 619 AYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVE 678
Query: 413 IIEEGGKPNSTSWETLAEG 431
++ +G P +S+ LAEG
Sbjct: 679 MVNKGFMPEFSSFRMLAEG 697
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 3/285 (1%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
+ LD + K + + A F S+ D Y L+ + R + A LL D+M ++
Sbjct: 89 VVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEER 148
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G + Y ++ +Y K + ++ +M +K + D Y+ N +++ G TE
Sbjct: 149 GCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELA 208
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+FE MK V N +F+ M K G+V A + + +E+R + + ++ L++
Sbjct: 209 CEIFERMK-KSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLIN 267
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G E Y+V RS Y MI + A+ G++ ++F + S
Sbjct: 268 CLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSA 327
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
+ NL++ VK G + A + + ++G P++ + L +
Sbjct: 328 NVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQ 372
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 120/297 (40%), Gaps = 15/297 (5%)
Query: 153 IAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+ K V A DF + PDTL +Y +L+ +A M A L M+ G
Sbjct: 59 LVKAGNVVLAMDFLDKMIKTGLEPDTL----LYNVVLDGLGKANMIDEACKLFASMKSMG 114
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
Y +++ + K +E + EM+E+G +Y + G E
Sbjct: 115 CPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAM 174
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
V + M +DK + P+ T +++ T + G+ E A E R++ + V ++ +L
Sbjct: 175 VVLKKM-LDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDC 233
Query: 327 YGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
G GK Y+ + R + P ++ ++ +I+ L R K+ +E S +
Sbjct: 234 CGKAGKVGLAYQFMDEMEARGIKP--NSITFNTLINCLGRAKYASEAYKVLQEMRSAGLT 291
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D M+ + K GN KA F + + G N ++ L + ++ R +A
Sbjct: 292 PDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDA 348
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 133/322 (41%), Gaps = 53/322 (16%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +LL AY A A+ ++ +M G + + +N ++ ++ +E E MV+ M
Sbjct: 25 TYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAEKMVAYM 84
Query: 238 KEKGIRLDVYSYNIWLSSCGS-QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+E G+ DV +Y+ L + +G K E V E M D V PN T++ + Y+K G
Sbjct: 85 QEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARD-GVAPNSYTYNYLIEGYVKAG 143
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+++ AE+ L R+ R+V T++ Y
Sbjct: 144 EMDWAEDVLERM-----------------------------------RTVGLAPTSMNYC 168
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII-- 414
++ + R D G EKI + + ++ +M+ Y K G+ + AE ++
Sbjct: 169 VLMDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAV 228
Query: 415 --EEGG-----KPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINF 467
EEGG +PN ++ TL ++ R L A + +G A W P NVI F
Sbjct: 229 AEEEGGGSKDCEPNVHTYSTLM--NVYARAGLAAGA--EGVLTRMTAAGWAP---NVITF 281
Query: 468 FKACEEESDMGSKEAFVALLRQ 489
S G E +L++
Sbjct: 282 TTLMTAYSRAGDPEGAELVLKR 303
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 8/201 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ YV+A AE ++++MR G A S+ Y V+M Y + ++ E ++ M
Sbjct: 131 TYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRM 190
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--------DKAVNPNWTTFSTMA 289
K++G++ +V + +++ +G E EGV M K PN T+ST+
Sbjct: 191 KKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLM 250
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+Y + G AE L R+ + + + + L++ Y G E V +
Sbjct: 251 NVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVS 310
Query: 350 VTNLGYHAMISSLARIGDIEG 370
L Y+ ++S+ +R+G EG
Sbjct: 311 PNVLTYNTLLSATSRMGLREG 331
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+N Y RA + AE ++ +M G+A + + + +MT Y + + + E ++ M
Sbjct: 245 TYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM 304
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G+ +V +YN LS+ G E G E + + + + TM K G
Sbjct: 305 EAAGVSPNVLTYNTLLSATSRMGLRE---GEVEERRAKRVLQ----VYDTMRRSAGKGGG 357
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK--EEVYR-VWNLYRSVFP--GVTN 352
+EKA D Y LL+ K+ +EVY+ + +R + P ++
Sbjct: 358 LEKAP-------------DEATYTVLLTCLLRFPKRLTKEVYKLILEDWRRLVPTRNRSD 404
Query: 353 LGYHAMISSLARIGDIEGMEKIFEE 377
Y + I+ LA +GD E M +F E
Sbjct: 405 RNYQSFITVLAAMGDWEEMATVFRE 429
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 109/277 (39%), Gaps = 41/277 (14%)
Query: 173 LKDRRVYGALLNAY-VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y LL Y + G AE ++++M G A +S YN ++ Y+K E D E
Sbjct: 90 LADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAE 149
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ M+ G+ +Y + + + + E + + MK + V N F+T+
Sbjct: 150 DVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMK-KEGVQANVQVFTTLMNA 208
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
Y K G VE AE L R +L++ G + P V
Sbjct: 209 YAKRGDVEGAEGVLAR---------------MLAVAEEEGGGS---------KDCEPNVH 244
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAF 409
Y +++ AR G G E + + + + P + +M+ Y + G+ + AE
Sbjct: 245 T--YSTLMNVYARAGLAAGAEGVLTRMTA--AGWAPNVITFTTLMTAYSRAGDPEGAELV 300
Query: 410 FNSIIEEGGKPNSTSWETLA---------EGHIRERR 437
+ G PN ++ TL EG + ERR
Sbjct: 301 LKRMEAAGVSPNVLTYNTLLSATSRMGLREGEVEERR 337
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 152/348 (43%), Gaps = 20/348 (5%)
Query: 98 EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVH 157
E+GG + ++ V+ K R A++V+D M +GE A+ + + +
Sbjct: 100 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE-----VKPEAVMYNALIGGY 154
Query: 158 GVASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
D L D + +R V Y L++A A L+++M KG A
Sbjct: 155 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 214
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
YN+++ + K + + M +G+R V +Y + + +G ++ + +F+
Sbjct: 215 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFD- 273
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
V + + P+ ++ + + G +++A E + +E + D V Y+ L+ +G
Sbjct: 274 EAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLG 333
Query: 332 KKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+ +E ++ + R + P + Y+ +IS + GD++ +I E ++ ++P +
Sbjct: 334 RVDEARKLIDEMTKRGIQPDLVT--YNTLISGYSMKGDVKDALRIRNEMMN--KGFNPTL 389
Query: 390 A--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
N ++ K G D AE ++E G P+ +++ +L EG E
Sbjct: 390 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 122/269 (45%), Gaps = 8/269 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKG-YAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
YG +++ + + A + D+M KG ++ YN ++ Y + D
Sbjct: 110 TYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDR 169
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQG-STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
M E+G+ + V +YN+ + + G TE E V E+ K + P+ T++ + + K
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG--KGLAPDVFTYNILINGHCKE 227
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
G V+KA E + R V Y L+ G+ +E ++++ + R + P + +
Sbjct: 228 GNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL--V 285
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+A+I+S + G+I+ +I E + + D N +M G D+A + +
Sbjct: 286 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 345
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ G +P+ ++ TL G+ + + +AL
Sbjct: 346 TKRGIQPDLVTYNTLISGYSMKGDVKDAL 374
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 117/260 (45%), Gaps = 16/260 (6%)
Query: 192 RGNAELLIDKMRD----KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG-IRLDV 246
RG + +D MR+ G A + Y +++ + K+ DE + EM KG ++ +
Sbjct: 85 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 144
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
YN + QG + ++ V++ V T++ + G+ +A E +
Sbjct: 145 VMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 203
Query: 307 RVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISS 361
+ + D Y+ L++ + G+V K E++ N+ R GV T + Y ++I +
Sbjct: 204 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE--NMSRR---GVRATVVTYTSLIYA 258
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L++ G ++ +K+F+E + D + N +++ + GN D+A + ++ P+
Sbjct: 259 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 318
Query: 422 STSWETLAEGHIRERRILEA 441
++ TL G R+ EA
Sbjct: 319 DVTYNTLMRGLCLLGRVDEA 338
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA- 301
R + +YN ++ S+G + + M+ + PN T+ T+ + + K+G+V++A
Sbjct: 69 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128
Query: 302 ---EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPGVTNLGYH 356
+E L + E + + V Y+ L+ Y GK + +YR + R V +T Y+
Sbjct: 129 KVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGV--AMTVATYN 183
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ +L G ++ EE + D N++++ + KEGN KA F ++
Sbjct: 184 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 243
Query: 417 GGKPNSTSWETL 428
G + ++ +L
Sbjct: 244 GVRATVVTYTSL 255
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 1/265 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y +L+N Y +A A L ++ G A L YN+++ Y ++ + +E
Sbjct: 369 LPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARR 428
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
EM E+G + DV +Y I ++ + + F+ M + K + P+ ++T +
Sbjct: 429 FKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEM-LSKGLQPDCFAYNTRISAE 487
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
+ +G +A + + SR D V Y+ L G ++ Y +W S
Sbjct: 488 LILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDC 547
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y +I + G + IF+ L + + Y + GN A +F
Sbjct: 548 ITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQK 607
Query: 413 IIEEGGKPNSTSWETLAEGHIRERR 437
++EEG +PN ++ L R R
Sbjct: 608 MLEEGVRPNEVTYNVLIHALCRMGR 632
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 5/259 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N + R D+M KG YN ++ + + E +
Sbjct: 441 DVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLT 500
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M +GI D +YNI+L G+ K V + V + P+ T++ + + +
Sbjct: 501 EVMISRGISSDTVTYNIFLDGLCKSGNL-KDAYVLWMKMVSDGLQPDCITYTCLIHAHCE 559
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G++ +A + + V Y + Y G Y + L V P
Sbjct: 560 RGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRP--NE 617
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+ +I +L R+G + F E L S + L++ KEGN+++A ++
Sbjct: 618 VTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSE 677
Query: 413 IIEEGGKPNSTSWETLAEG 431
+ + G P+ + L +G
Sbjct: 678 MHQHGIHPDHCTHNALFKG 696
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 132/361 (36%), Gaps = 42/361 (11%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ++N R A L+D+MR A + +N ++T Y ++ ++ EM
Sbjct: 270 TYNVVINGLARKGELEKAAQLVDRMRMSKKA-SAFTFNPLITGYFARGSVEKAGALQLEM 328
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +GI V +YN + G+ E F M+ + P+ T++++ Y K G
Sbjct: 329 ENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRA-MGLLPDLITYNSLINGYCKAGN 387
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR------------------- 338
+++A ++ + Y+ LL Y +G EE R
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447
Query: 339 -------VWNL--YRSVFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVK 382
V NL R F + + G Y+ IS+ +G ++ E +S
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG 507
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
S D N+ + K GN A + ++ +G +P+ ++ L H R+ EA
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREAR 567
Query: 443 SCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYR-KEKDYMSL 501
G + P V F A ++ S + + + G R E Y L
Sbjct: 568 DIFDGMLVS----GLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVL 623
Query: 502 I 502
I
Sbjct: 624 I 624
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 101/219 (46%), Gaps = 8/219 (3%)
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV-DKAVNPNWTTF 285
+D++ S+ +EM + GI + +YN L S +G ++ + M+ P+ T+
Sbjct: 212 WDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTY 271
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGR-DRVPYHYLLSLYGSVGKKEEV--YRVWNL 342
+ + + G++EKA + + R+ R++ + ++ L++ Y + G E+ ++
Sbjct: 272 NVVINGLARKGELEKAAQLVDRM--RMSKKASAFTFNPLITGYFARGSVEKAGALQLEME 329
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ P V Y+ +I + R G++E F E ++ D N +++ Y K GN
Sbjct: 330 NEGIVPTVVT--YNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGN 387
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+A F + G P+ ++ L +G+ R + EA
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEA 426
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 142/326 (43%), Gaps = 9/326 (2%)
Query: 124 HALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV--YGA 181
HA+++ D M +RG + + + ++ I K + A F +P + V +
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYN--VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
+L + +AE L+ M KG++ + +N+++ + ++ +M + G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVE 299
+ + SYN L + +KM+ E ++ V + P+ T++TM T K G+VE
Sbjct: 375 CQPNSLSYNPLLHGFCKE---KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
A E L ++ S+ + Y+ ++ GK + ++ + R+ + Y +++
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
L+R G ++ K F E+ + + N +M K D+A F +I G K
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 420 PNSTSWETLAEGHIRERRILEALSCL 445
PN TS+ L EG E EAL L
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELL 577
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 125/307 (40%), Gaps = 36/307 (11%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D Y L+ A R G+A L+D+MRD+G + YNV++ K DE
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+++M G + +V ++NI L S S G E + M + K +P+ TF+ +
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNILIN 352
Query: 291 MYIKMG-----------------------------------QVEKAEESLRRVESRITGR 315
+ G ++++A E L R+ SR
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
D V Y+ +L+ GK E+ + N S + Y+ +I LA+ G K+
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+E + D + ++ +EG D+A FF+ G +PN+ ++ ++ G +
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532
Query: 436 RRILEAL 442
R+ A+
Sbjct: 533 RQTDRAI 539
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 114/264 (43%), Gaps = 8/264 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
L+ + R A +++ + G + YNVM++ Y K E + S++ M
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-- 199
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
+ DV +YN L S G ++ V + M + + P+ T++ + + V
Sbjct: 200 -VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM-LQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A + L + R D V Y+ L++ G+ +E + N S + ++ ++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
S+ G EK+ + L + + P + N+++++ ++G +A + + G
Sbjct: 318 SMCSTGRWMDAEKLLADML--RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 419 KPNSTSWETLAEGHIRERRILEAL 442
+PNS S+ L G +E+++ A+
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAI 399
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 51/304 (16%), Positives = 115/304 (37%), Gaps = 38/304 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L + + A ++D+M + + Y +++ + ++
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--------------------- 273
EM+++G DV +YN+ ++ +G ++ M
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 274 -------------VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
+ K +P+ TF+ + + G + +A + L ++ + + Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 321 HYLLSLYGSVGKKEEV--YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
+ LL + K + Y + R +P + Y+ M+++L + G +E +I +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT--YNTMLTALCKDGKVEDAVEILNQL 440
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
S S N ++ K G KA + + + KP++ ++ +L G RE ++
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 439 LEAL 442
EA+
Sbjct: 501 DEAI 504
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 125/274 (45%), Gaps = 6/274 (2%)
Query: 162 AEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AE+ F ++ + D Y LL+ Y + L M DKG + +N++++
Sbjct: 388 AEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILIS 447
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAV 278
+ K DE + +EM+ +G+R DV +Y+ +S+ G + ME +++ + +
Sbjct: 448 AHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISI--GL 505
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR-DRVPYHYLLSLYGSVGKKEEVY 337
PN + ++ + G + KA+E + + S+ R + V + ++ + G+ + +
Sbjct: 506 EPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAH 565
Query: 338 RVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
V+NL + T + ++++I +G +E + + +SV D N ++S Y
Sbjct: 566 DVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGY 625
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
K G D F ++ + KP + ++ + +G
Sbjct: 626 CKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDG 659
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 125/307 (40%), Gaps = 37/307 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++++A +AR AEL++ +M DKG L Y ++ Y + E M
Sbjct: 298 DVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMF 357
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV-------------------- 274
+M KG+ + ++N ++SS G ++ E +F+ M
Sbjct: 358 RKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATE 417
Query: 275 --------------DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
DK + N F+ + + + K G +++A ++ + D V Y
Sbjct: 418 GRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTY 477
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
L+S + +G+ + ++ S+ + YH++I GD+ +++ E +S
Sbjct: 478 STLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMS 537
Query: 381 VKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
K P I + ++ EG A FN +I G +P ++ +L +G+ ++
Sbjct: 538 -KGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 596
Query: 439 LEALSCL 445
+A L
Sbjct: 597 EKAFGVL 603
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 129/294 (43%), Gaps = 19/294 (6%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
LI++M KG + YN ++ K + D+ E ++ +M +KG+ D +Y +
Sbjct: 286 LINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYS 345
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G ++ +F M K + P TF++ + K G+ + AEE + + ++ D
Sbjct: 346 CSGHWKESAKMFRKM-TSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDL 404
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG--VTNL-GYHAMISSLARIGDIEGMEKI 374
V Y LL Y + G+ ++ NL+ S+ V N ++ +IS+ A+ G ++ +
Sbjct: 405 VSYSILLHGYATEGRFADMN---NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLV 461
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
F E D + ++S + + G A F+ +I G +PN+ + +L G
Sbjct: 462 FTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCM 521
Query: 435 ERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA-----CEEESDMGSKEAF 483
+++A +E P+P N++ FF + C E M + + F
Sbjct: 522 HGDLVKA-----KELVSEMMSKGIPRP-NIV-FFSSIIHSLCNEGRVMDAHDVF 568
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 124/304 (40%), Gaps = 43/304 (14%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE-VESMVSEM 237
YG L++ RAR ++ G ++ N + K DE V+ ++ M
Sbjct: 159 YGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRM 218
Query: 238 KEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+ G + SYN + S CG S E ++ V + K +P+ +F+T+ + K G
Sbjct: 219 SDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQG 278
Query: 297 QV-----------------------------------EKAEESLRRVESRITGRDRVPYH 321
+V +KAE LR++ + D + Y
Sbjct: 279 EVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYT 338
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
++ Y G +E +++ + + PG+ +++ +SSL + G + E+IF +++
Sbjct: 339 AIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVT--FNSFMSSLCKHGRSKDAEEIF-QYM 395
Query: 380 SVKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+ K ++ ++++ Y EG F F+S+ ++G N + L H + +
Sbjct: 396 TTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMM 455
Query: 439 LEAL 442
EA+
Sbjct: 456 DEAM 459
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 119/270 (44%), Gaps = 6/270 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++A+ R +A +M G +++ Y+ ++ + + + + +V
Sbjct: 473 DVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELV 532
Query: 235 SEMKEKGI-RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
SEM KGI R ++ ++ + S ++G VF L+ + P TF+++ Y
Sbjct: 533 SEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLV-IHIGDRPTIVTFNSLIDGYC 591
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVT 351
+G++EKA L + S D V Y+ L+S Y GK ++ ++ L++ V P T
Sbjct: 592 LVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKP--T 649
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y ++ L G +K+F E + ++ D +++ + D+A F+
Sbjct: 650 TVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFH 709
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ K + T T+ + RR EA
Sbjct: 710 KLGAMDCKFDITILNTVINALYKVRRREEA 739
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 107/260 (41%), Gaps = 9/260 (3%)
Query: 159 VASAEDFFLSLPDTLKDRRV---YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
V A D F +L + DR + +L++ Y A ++D M G + YN
Sbjct: 561 VMDAHDVF-NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYN 619
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
+++ Y K + D+ + EM K ++ +Y+I L G T + +F M +D
Sbjct: 620 TLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEM-ID 678
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ T+ + + ++A ++ + D + +++ V ++EE
Sbjct: 679 SGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREE 738
Query: 336 VYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
++ + + P V+ Y MI +L + G +E + +F + R+ N +
Sbjct: 739 ANDLFAAISTSGLVPNVST--YGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDI 796
Query: 394 MSWYVKEGNFDKAEAFFNSI 413
+ +++G+ KA + + +
Sbjct: 797 IRMLLQKGDIVKAGYYMSKV 816
>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 492
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 158/359 (44%), Gaps = 5/359 (1%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S VL D E G + R+++ L + R A + M + G R + +A ++
Sbjct: 72 SLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLE 131
Query: 150 LDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
L+A+ H + A+ L + D ++RR Y LL+AY RA ++ ++ +M+ +G
Sbjct: 132 -GLLARAH-LCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGI 189
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ + Y+ ++ LY + + ++ EM+E G+ LDV YN + + G G
Sbjct: 190 QLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARR 249
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+FE M+ + + P+ T++ + + ++G +++A ++ D + ++S
Sbjct: 250 LFEKMRAE-GIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRL 308
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
G GK +E+ ++++ R+ + Y ++ + G + + + P
Sbjct: 309 GEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSP 368
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
I ++ + Y ++G ++ + EG +PN L R LEA++ +
Sbjct: 369 SIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQ 427
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 119/277 (42%), Gaps = 5/277 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ A RA AE L+ +MR G + YN ++ + + ++ +M
Sbjct: 90 AYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLCLADRLLLQM 149
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G+ + +Y + L + G E V MK + + + +ST+ +Y G
Sbjct: 150 ADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMK-RRGIQLDTAGYSTLVRLYRDNGM 208
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGY 355
+KA + + ++ D Y+ L+ +G G+ + R++ R+ + P + +
Sbjct: 209 WKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIAT--W 266
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+A+I R+G+++ + F DP+I ++S ++G +D+ + F+ +
Sbjct: 267 NALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMRN 326
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAE 452
G K + + L + + + R +A C+ A E
Sbjct: 327 RGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEE 363
>gi|302799860|ref|XP_002981688.1| hypothetical protein SELMODRAFT_115229 [Selaginella moellendorffii]
gi|300150520|gb|EFJ17170.1| hypothetical protein SELMODRAFT_115229 [Selaginella moellendorffii]
Length = 289
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 39/258 (15%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV--HSLPYNVMMTLYMKI-KEYDEV 230
KD +Y ALL+A+ +A G E + D RD ++ + L YN++M Y+K E +V
Sbjct: 44 KDAGMYNALLHAFCKA---GKLEAVDDLFRDMKQSIRPNHLSYNILMHSYVKAGHELTKV 100
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
S+ EM +G++ V SYNI +++C + + F MK + + PN T+S++
Sbjct: 101 VSVFKEMYLRGVKASVASYNILIAACATGKQAWEARVFFSNMK-KQDLEPNVITYSSLIN 159
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
+Y+ G V +L + + V P V
Sbjct: 160 VYVASGDVGNCAAALDVLREMVKAE------------------------------VMPNV 189
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
T + ++ + G IE KIF+ + N++M+ Y K G+ A++ F
Sbjct: 190 TT--FSCLLHGYGQEGKIEEAMKIFQTMKDLGIEPSAITFNILMTMYSKSGHHALAQSCF 247
Query: 411 NSIIEEGGKPNSTSWETL 428
+ +IE G +P S+ +L
Sbjct: 248 HEMIESGLEPTYVSFLSL 265
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 6/268 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L++AY ++ AE L +M+ KG S YN++M Y + + + +E+++ EM
Sbjct: 350 VYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEM 409
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ G+ +V SY +S+ G Q M L + P +++ + Y G
Sbjct: 410 QDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGW 469
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
EKA + ++ Y LL + G + + ++W L S T + ++
Sbjct: 470 HEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNI 529
Query: 358 MISSLARIGD-IEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
++ A+ G +E + IFE K + P + N++M+ Y + G + +
Sbjct: 530 LLDGFAKQGHYMEARDVIFEFG---KIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMT 586
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEAL 442
KP+S ++ T+ ++R R A
Sbjct: 587 SLNLKPDSITYSTMIYAYVRVRDFKRAF 614
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 160/374 (42%), Gaps = 20/374 (5%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
+I ++ I L M N + + +L E+ G ++ L K R A++ +
Sbjct: 45 VITYSTIINGLCKMGNTTM-ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFF 103
Query: 130 DWMNNRG---ERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP--DTLKDRRVYGALLN 184
M G + F S+ L + V A F + + + ++ + L++
Sbjct: 104 SEMVKEGIPPDVFTYSSI-----LHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILID 158
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
+ RM A L+ + M +KG YN ++ Y + DE + + + M KG
Sbjct: 159 GLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAP 218
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
+V SYNI ++ G ++ +G+ M K++ P+ T+ST+ + ++G+ ++A+E
Sbjct: 219 NVRSYNILINGHCKSGRIDEAKGLLAEMS-HKSLTPDIFTYSTLMRGFCQVGRPQEAQEL 277
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSL 362
L+ + S + + Y +L G +E + + + + P + Y +I +
Sbjct: 278 LKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNI--FIYTILIEGM 335
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
G +E ++F L VK P + +M+S +K G ++A F + G P
Sbjct: 336 CTFGKLEAARELFSN-LFVK-GIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLP 393
Query: 421 NSTSWETLAEGHIR 434
NS ++ + +G +R
Sbjct: 394 NSCTYNVIIQGFLR 407
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 121/296 (40%), Gaps = 45/296 (15%)
Query: 165 FFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
F L L TL + LL+ +A L D+M G+ + Y+ ++ K+
Sbjct: 2 FKLGLQPTL---VTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKM 58
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWT 283
++ +M+EKG + +V +YN + S C + TE M+ E++K + + P+
Sbjct: 59 GNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVK--EGIPPDVF 116
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
T+S++ + +G+V +A +++ R ++V + L+ + KK + W ++
Sbjct: 117 TYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILID---GLCKKRMISEAWLVF 173
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
++ +G+E D N ++ Y
Sbjct: 174 ETMTE--------------------KGLEP------------DVYTYNALVDGYCSRSQM 201
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
D+A+ FN + +G PN S+ L GH + RI EA KG A KS P
Sbjct: 202 DEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA----KGLLAEMSHKSLTP 253
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 117/275 (42%), Gaps = 5/275 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N + A L+ KM +KG + + YN ++ K + E
Sbjct: 44 DVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFF 103
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM ++GI DV++Y+ L + G + +F+ M V++ V PN TF+ + K
Sbjct: 104 SEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQM-VERNVIPNKVTFTILIDGLCK 162
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
+ +A + + D Y+ L+ Y S + +E +++N+ + P V +
Sbjct: 163 KRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRS 222
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I+ + G I+ + + E + D + +M + + G +A+
Sbjct: 223 --YNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKE 280
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKG 447
+ G PN ++ + +G + + EA LK
Sbjct: 281 MCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKA 315
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 124/271 (45%), Gaps = 5/271 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ + +A L+++M+ KG + + Y +++ + K +E +++
Sbjct: 406 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 465
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM KG+ L+ YN +S+ + +F M K P+ TF+++ K
Sbjct: 466 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS-SKGCKPDIFTFNSLIFGLCK 524
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+ + E+A + + + + Y+ L+ + G +E ++ N L+R + +
Sbjct: 525 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC--PLDD 582
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+ +I +L R G+IE +FE+ +S + + N++++ + GN A F
Sbjct: 583 ITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 642
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+I G P+ ++ +L G + R EAL+
Sbjct: 643 MIHRGLTPDIVTYNSLINGLCKTGRAQEALN 673
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 127/294 (43%), Gaps = 40/294 (13%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ + + A ++D+M KG A++++ YN +++ K ++ + +M +M
Sbjct: 445 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 504
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
KG + D++++N + E+ G+++ M ++ + N T++T+ +++ G +
Sbjct: 505 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI-ANTITYNTLIHAFLRRGAM 563
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE----------------------- 335
++A + + + R D + Y+ L+ G E+
Sbjct: 564 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 623
Query: 336 ---VYRVWN-----------LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+ R N ++R + P + Y+++I+ L + G + +F++
Sbjct: 624 INGLCRTGNIQHALEFLRDMIHRGLTPDIVT--YNSLINGLCKTGRAQEALNLFDKLQVE 681
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
D N ++SW+ KEG FD A + ++ G PN +W L I+E
Sbjct: 682 GICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 735
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 136/337 (40%), Gaps = 10/337 (2%)
Query: 113 VKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT 172
+ L K R A ++ D M RG F ++ + + + ++ V A +P+
Sbjct: 312 IHGLCKMLRIHEAAKLVDRMLLRG--FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN- 368
Query: 173 LKDRRVYGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ ++ L+N YV R R+ ++ + M G YN ++ K
Sbjct: 369 -PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 427
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+++EM+ KG +V +Y I + +G E+ V + M K + N ++ + +
Sbjct: 428 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS-GKGLALNAVGYNCLISA 486
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV- 350
K +V+ A + S+ D ++ L+ V K EE ++ + GV
Sbjct: 487 LCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ--DMLLEGVI 544
Query: 351 -TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y+ +I + R G ++ K+ + L D N ++ + GN +K A
Sbjct: 545 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 604
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
F ++ +G PN+ S L G R I AL L+
Sbjct: 605 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 641
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 149/362 (41%), Gaps = 53/362 (14%)
Query: 104 LTKWELCRVVK---------ELRKF----RRYKHALEVYDWMNNR-GERFRLSASDAAIQ 149
+T ++LC++++ EL ++ + Y H +VY + ++ G +DA +
Sbjct: 94 ITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALL- 152
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+ K G+ E F+ ++ Y RA + G A L+ MR V
Sbjct: 153 --MQMKQEGIVFRESLFI-------------LIMKHYGRAGLPGQATRLLLDMR----GV 193
Query: 210 HSL-----PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
+S YNV++ + + V ++ EM KGI VY++ + + + +
Sbjct: 194 YSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDS 253
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
+ + M V PN + T+ K+G+V + + L + D ++ +
Sbjct: 254 ACALLKDMTRHGCV-PNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAI 312
Query: 325 SLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ + E ++ + L R P + Y ++ L R+G ++ E + +
Sbjct: 313 HGLCKMLRIHEAAKLVDRMLLRGFTP--NSFTYGVLMHGLCRMGKVD------EARMLLN 364
Query: 383 SSYDPRIA--NLMMSWYVKEGNFDKAEAFFN-SIIEEGGKPNSTSWETLAEGHIRERRIL 439
+P + N +++ YV G D+A+A + S++ G P+ ++ TL G ++ ++
Sbjct: 365 KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLV 424
Query: 440 EA 441
A
Sbjct: 425 SA 426
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 7/163 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAE---LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D Y L+ A RA GN E L + M KG +++ N+++ +
Sbjct: 581 DDITYNGLIKALCRA---GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 637
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ +M +G+ D+ +YN ++ G ++ +F+ ++V+ + P+ T++T+ +
Sbjct: 638 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE-GICPDAITYNTLISW 696
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
+ K G + A L R + V ++ L+S + G +E
Sbjct: 697 HCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 151/348 (43%), Gaps = 16/348 (4%)
Query: 93 VLNDWEKGGRS--LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ- 149
++N+ K S +T + +V++ L K +Y A++ + M + + + A+
Sbjct: 188 LVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEME---KSYGVKTDTIAMNS 244
Query: 150 -LDLIAKVHGVASAEDFFLSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+D + K + + A + FL L DT+K D R + L++ + +AR +A ++D M+ +
Sbjct: 245 LMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEF 304
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ Y + Y K ++ V M+ EM+E G +V +Y I + S G + G
Sbjct: 305 TPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALG 364
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
V+E MK D V P+ +S++ + K G+ + A E + ++ RD + Y+ ++S
Sbjct: 365 VYEKMKEDGCV-PDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAA 423
Query: 328 GSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ E R+ S P V Y ++ ++ + + +
Sbjct: 424 LHHSRDEMALRLLKRMEDEEGESCSPNVET--YAPLLKMCCHKKKMKLLGILLHHMVKND 481
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
S D L++ G ++A FF + +G P ++ + L +
Sbjct: 482 VSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVD 529
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/386 (19%), Positives = 159/386 (41%), Gaps = 23/386 (5%)
Query: 53 SMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRV 112
++ + HS + + P +AI NP L ++ D+ + S + R
Sbjct: 64 TVEKFHSIIKDHYRKNPTSPNDAIL-------NPSLTLHALSLDFSQIETSQVSPSVVRC 116
Query: 113 VKE----LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLS 168
V E +R +L ++W +R + S +DL KV D
Sbjct: 117 VIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQF----DLAWH 172
Query: 169 LPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
L D +K R V + L+ YVRA + A ++M D G + ++++++
Sbjct: 173 LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLS 232
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
+ + E +S +K++ DV Y + G + E VF+ MK+ + PN
Sbjct: 233 RKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKL-AGIEPNV 290
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
T+S + + GQ+ +A + + + + ++ L+ ++ G+ E+V +V+N
Sbjct: 291 YTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQ 350
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ + + Y+ +I + R ++E K+ + K + N + + K+ +
Sbjct: 351 MKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRD 410
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETL 428
+ A ++ ++E +PN+ ++ L
Sbjct: 411 VNGAHRMYSKMMEAKCEPNTVTYNIL 436
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 105/236 (44%), Gaps = 8/236 (3%)
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
PYN M+ L K++++D ++ MK + + + + ++ I + G + F M
Sbjct: 153 PYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GS 329
+ D P+ FS + + + + +A+ ++ R D + Y L+ + G
Sbjct: 213 E-DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEP-DVIVYTNLVRGWCRAGE 270
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+ + E+V++ L + P V Y +I +L R G I +F + L + +
Sbjct: 271 ISEAEKVFKEMKL-AGIEPNV--YTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT 327
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
N +M +VK G +K +N + + G +P++ ++ L E H R+ + A+ L
Sbjct: 328 FNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVL 383
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 7/157 (4%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPDTLK------DRRVYGALLNAYVRARMRGNAELLID 200
AI + + +VH A + L + + +K D Y L+ A+ R NA +++
Sbjct: 325 AITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLN 384
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
M K V++ +N + K ++ + M S+M E + +YNI +
Sbjct: 385 TMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSK 444
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
ST+ + + + M DK V PN T+ + TM+ MG
Sbjct: 445 STDMVLKMKKEMD-DKEVEPNVNTYRLLVTMFCGMGH 480
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 60/338 (17%), Positives = 132/338 (39%), Gaps = 56/338 (16%)
Query: 88 LGSASV--LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASD 145
L S +V N E G K V+ L + RR A +D + +R E D
Sbjct: 201 LASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE------PD 254
Query: 146 AAIQLDLI---AKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
+ +L+ + ++ AE F + L + Y +++A R A +
Sbjct: 255 VIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFA 314
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS----- 255
M D G A +++ +N +M +++K ++V + ++MK+ G D +YN + +
Sbjct: 315 DMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDE 374
Query: 256 ----------------CGSQGSTEKMEGVFELMKVDKAVN---------------PNWTT 284
C ST +F ++ + VN PN T
Sbjct: 375 NLENAVKVLNTMIKKKCEVNAST--FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVT 432
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY- 343
++ + M++ + + + ++ + + Y L++++ +G Y+++
Sbjct: 433 YNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV 492
Query: 344 --RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
+ + P ++ Y +++ L R G ++ E++ E+ +
Sbjct: 493 EEKCLTPSLS--LYEMVLAQLRRAGQLKKHEELVEKMI 528
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 125/269 (46%), Gaps = 11/269 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++A + ++ A L +M KG + + Y ++ + + E +++EM
Sbjct: 201 MYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEM 260
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K I +VY+YNI + + +G ++ + V +M + V P+ T+ST+ Y + +
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVM-LKACVKPDVITYSTLMDGYFLVYE 319
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTN 352
++KA+ + D Y L++ + K + V NL+ +++ PG+
Sbjct: 320 LKKAQHVFNAMSLMGVTPDVHSYTILINGF---CKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y ++I L + G I + + +E + N ++ K G+ D+A A FN
Sbjct: 377 --YSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNK 434
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ ++G +P S ++ L +G + R+ +A
Sbjct: 435 MKDQGIRPCSFTFTILLDGLCKGGRLKDA 463
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 122/303 (40%), Gaps = 11/303 (3%)
Query: 150 LDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
LD AK+ ++A L L D L+N + ++ K+ +GY
Sbjct: 66 LDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGY 125
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
H++ + ++ + ++ ++ +GI+ D SY ++ G T G
Sbjct: 126 QPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTR---G 182
Query: 268 VFELM-KVD-KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+L+ K+D + PN ++T+ K V +A + ++ D V Y L+
Sbjct: 183 AIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIY 242
Query: 326 LYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ K +E + N + +++ P V Y+ ++ +L + G ++ + + L
Sbjct: 243 GFCIASKLKEAIGLLNEMVLKTINPNVYT--YNILVDALCKEGKVKEAKNVLAVMLKACV 300
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
D + +M Y KA+ FN++ G P+ S+ L G + + + EAL+
Sbjct: 301 KPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALN 360
Query: 444 CLK 446
K
Sbjct: 361 LFK 363
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 169 LPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
L D ++DR + Y +L++ + A L +KM+D+G S + +++
Sbjct: 396 LIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLC 455
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
K + + ++ KG LDVY YN+ ++ QG E+ + M+ + V PN
Sbjct: 456 KGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCV-PNA 514
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESR 311
TF + K + +KAE+ LR++ R
Sbjct: 515 VTFDIIINALFKKDENDKAEKLLRQMICR 543
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
Query: 156 VHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
V+ + A+ F +SL D Y L+N + + +M A L +M K +
Sbjct: 317 VYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
Y+ ++ K V ++ EM+++GI +V +YN + G ++ +F MK
Sbjct: 377 YSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMK 436
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D+ + P TF+ + K G+++ A+E+ + + ++ D Y+ +++ + G
Sbjct: 437 -DQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLL 495
Query: 334 EE 335
EE
Sbjct: 496 EE 497
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 99/239 (41%), Gaps = 12/239 (5%)
Query: 210 HSLP---YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
H+ P +N ++ + KIK Y S+ ++ KGI+ D+ + NI ++ G
Sbjct: 55 HTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQIT--F 112
Query: 267 GVFELMKVDK-AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
G L K+ K P+ TF+T+ GQV KA ++ ++ D+V Y L++
Sbjct: 113 GFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLIN 172
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLG---YHAMISSLARIGDIEGMEKIFEEWLSVK 382
+G + L R + +T Y+ +I +L + + +F E +
Sbjct: 173 GVCKIGDTRGAIK---LVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG 229
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
S D ++ + +A N ++ + PN ++ L + +E ++ EA
Sbjct: 230 ISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 151/337 (44%), Gaps = 13/337 (3%)
Query: 109 LCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ--LDLIAKVHGVASAEDFF 166
+ +V++ L + R+++ A+E + R E+F + AA+ +D + K V A
Sbjct: 199 MTKVMRRLARARKHEDAIEAF----GRMEKFGVKKDTAALNVLIDALVKGDSVEHAHKVV 254
Query: 167 LSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
L ++ R + L++ + RAR NA ++ M++ G+ Y + Y +
Sbjct: 255 LEFKGSIPLSSRSFNVLMHGWCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYGHER 314
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++ +V+ ++ EM+E G + +Y + G G K V+E MK D V + +
Sbjct: 315 DFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVA-DTPFY 373
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR- 344
S+M + K G+++ A + + + RD V Y+ ++S + ++E R+
Sbjct: 374 SSMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNSMISTACAHSREETALRLLKEMED 433
Query: 345 -SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
S P V YH ++ + ++ ++ + + S D +L+++ K G
Sbjct: 434 GSCKPNVGT--YHRLLKMCCKKKRMKVLKFLLDHMFKNNISPDLATYSLLVNALRKSGKV 491
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ A +F ++ G P ++ + LA G + + +LE
Sbjct: 492 EDAYSFLEEMVLRGFTPKPSTLKKLA-GELESKSMLE 527
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 149/353 (42%), Gaps = 9/353 (2%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
V+++ ++ G T + L K R + A+EVY M ER R + + ++
Sbjct: 228 GVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKK--ERCRTNTETYTLMIN 285
Query: 152 LIAKVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+ K + S+ F + + Y AL+NA+ R + AE + ++M+ G+
Sbjct: 286 VYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEP 345
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
YN +M Y + + S M+ G D SYNI + + G G ++ E F
Sbjct: 346 DVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAF 405
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+ +K + + P + + + + + G V + EE + ++ D + +L+ YG
Sbjct: 406 QELK-QQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGR 464
Query: 330 VGKKEEVYRVWNLYR---SVFPGVTNLG-YHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G+ +++ R++ G + Y+ M+++ R G ++ ME F + +
Sbjct: 465 AGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAA 524
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
D + Y ++ + + F +++ G P++ + + L ER++
Sbjct: 525 DVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQV 577
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 149/362 (41%), Gaps = 5/362 (1%)
Query: 80 LSLMDNPQLGSASVLNDWEKGGRSLTKWE-LCRVVKELRKFRRYKHALEVYDWMNNRGER 138
L L+ +ASV +K ++ W+ + V +LR R+++ + V +W+ R
Sbjct: 109 LELVQTRGTDAASVWESLDKIPQAHDLWDDIVNVAVQLRLNRQWEPIITVCEWVLRRSS- 167
Query: 139 FRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAE 196
FR + +D + ++ AE +++L + + Y LL AY + AE
Sbjct: 168 FRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAE 227
Query: 197 LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
+I +M+ G + YN + +K + ++ + MK++ R + +Y + ++
Sbjct: 228 GVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVY 287
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
G VF MK PN T++ + + + G EKAEE ++ D
Sbjct: 288 GKANQPMSSLRVFREMK-SVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPD 346
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y+ L+ Y G + +++L + Y+ ++ + R G + E F+
Sbjct: 347 VYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQ 406
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
E + L++S + + GN + E + + G +P++ + + + R
Sbjct: 407 ELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAG 466
Query: 437 RI 438
R+
Sbjct: 467 RL 468
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 43/101 (42%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++NAY RA E + +G A + + + Y + KEY + +
Sbjct: 490 DTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVF 549
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
EM + G D + + L++C + E+++ + M D
Sbjct: 550 EEMVDAGCYPDAGTAKVLLAACSDERQVEQVKAIVRSMHKD 590
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 125/276 (45%), Gaps = 6/276 (2%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
S PD++ +++ Y ++ +A L+D+M G V++L YN ++ Y + K+
Sbjct: 136 SCPDSVTPLSA-SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDD 194
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
D V M+ M+ +GI V +Y I + + K+E VFE MK K ++ + +S+
Sbjct: 195 DRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK-SKNLSGDVYFYSS 253
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+ Y + G V +A E + Y L++ + +G+ E + +
Sbjct: 254 VINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 313
Query: 348 PGVTNLGYHAMISSLARIGDIE-GME-KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
G+ + ++ MI R ++ +E K+ E + ++ D N + + D+
Sbjct: 314 VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIE--LDVYTYNTLACGLRRANRMDE 371
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A+ +IE+G +PN S+ TL H E ++EA
Sbjct: 372 AKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEA 407
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 44/272 (16%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ YGAL+N + + AE+L+ M+ +G ++ + +N M+ Y + D+ +
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 341
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--DKAVNPNWTTFSTMATMY 292
M++ GI LDVY+YN +CG + +M+ L+++ +K V PN +++T+ +++
Sbjct: 342 MIMEKMGIELDVYTYNTL--ACGLR-RANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIH 398
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G + +A RR+ + G P +
Sbjct: 399 CNEGDMVEA----RRLFREMAGNGAEP-------------------------------SL 423
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LMMSWYVKEGNFDKAEAFF 410
+ Y+ M+ + G I E+ +E K P I + ++ + G D A F
Sbjct: 424 VTYNVMMDGYIKKGSIREAERFKKEM--EKKGLVPDIYSYAALVHGHCVNGKVDVALRLF 481
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ + G KPN ++ L G +E R EA
Sbjct: 482 EEMKQRGSKPNLVAYTALISGLAKEGRSEEAF 513
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 110/272 (40%), Gaps = 9/272 (3%)
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+V L +V++ Y K ++ EM G++++ YN L + + +++
Sbjct: 140 SVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAE 199
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ ++M+ ++ + P T++ + + K E ++S+ D Y +++ Y
Sbjct: 200 MLKVME-NEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAY 258
Query: 328 GSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G V++ V G+ Y A+I+ +IG +E E + +
Sbjct: 259 CRAGNVRRASEVFD--ECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGI 316
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ + N M+ Y ++ DKA + + G + + ++ TLA G R R+ EA + L
Sbjct: 317 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 376
Query: 446 KGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
+ K RP V+ E DM
Sbjct: 377 RIMI----EKGVRPNHVSYTTLISIHCNEGDM 404
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L RA A+ L+ M +KG + + Y +++++ + E +
Sbjct: 352 DVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLF 411
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM G + +YN+ + +GS + E + M+ K + P+ +++ + +
Sbjct: 412 REMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEME-KKGLVPDIYSYAALVHGHCV 470
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT--N 352
G+V+ A ++ R + + V Y L+S G+ EE +++++ + G+T +
Sbjct: 471 NGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYD--NMLGDGLTPDD 528
Query: 353 LGYHAMISSL 362
Y A++ SL
Sbjct: 529 ALYSALVGSL 538
>gi|449443502|ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
Length = 704
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK------DRRV 178
A +YD R E +R+ + + + K+HGVA D L++ + +K + +
Sbjct: 268 AFSLYD--RARTENWRIDPATFSTMI----KIHGVAGNYDGCLNVYEEMKAIGIKPNLVI 321
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+A RA+ + + +M G++ Y ++ Y + + ++ + EMK
Sbjct: 322 YNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMK 381
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG++L+V YN L+ C G + +F+ MK +P+ TFS+M T+Y G+V
Sbjct: 382 EKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKV 441
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
+AEE L + + L+ YG + ++V R +N
Sbjct: 442 SEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 484
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 142/315 (45%), Gaps = 10/315 (3%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP- 170
+K RK R + A ++++ M NRG + I + + + A ++F +P
Sbjct: 185 TLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLP--SKAVEWFEKMPS 242
Query: 171 -DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D D Y +++AY RA A L D+ R + + + ++ M+ ++ YD
Sbjct: 243 FDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDG 302
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ EMK GI+ ++ YN L + G +++ +++ M + +P+W T++++
Sbjct: 303 CLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEM-IKNGFSPSWATYASLL 361
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFP 348
Y + E A + ++ + + + Y+ LL++ VG E ++ ++ S
Sbjct: 362 RAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTC 421
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKA 406
+ + +MI+ + G + E++ + V++ +DP I L ++ Y K D
Sbjct: 422 SPDSWTFSSMITIYSCGGKVSEAEEMLNDM--VEAGFDPNIFVLTSLIQCYGKAKRVDDV 479
Query: 407 EAFFNSIIEEGGKPN 421
FN +IE G P+
Sbjct: 480 VRTFNQLIELGLTPD 494
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 96/221 (43%), Gaps = 5/221 (2%)
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
++ YNV + ++ K ++ + E + EM +G++ D +++ +S K F
Sbjct: 178 QTIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWF 237
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
E M NP+ T+STM Y + G V+ A R + D + ++ ++G
Sbjct: 238 EKMP-SFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGV 296
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
G + V+ +++ + Y+ ++ ++ R ++ I++E +K+ + P
Sbjct: 297 AGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEM--IKNGFSPSW 354
Query: 390 ANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
A ++ Y + + A + + E+G + N + TL
Sbjct: 355 ATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTL 395
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 125/276 (45%), Gaps = 6/276 (2%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
S PD++ +++ Y ++ +A L+D+M G V++L YN ++ Y + K+
Sbjct: 136 SCPDSVTPLSA-SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDD 194
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
D V M+ M+ +GI V +Y I + + K+E VFE MK K ++ + +S+
Sbjct: 195 DRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK-SKNLSGDVYFYSS 253
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+ Y + G V +A E + Y L++ + +G+ E + +
Sbjct: 254 VINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 313
Query: 348 PGVTNLGYHAMISSLARIGDIE-GME-KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
G+ + ++ MI R ++ +E K+ E + ++ D N + + D+
Sbjct: 314 VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIE--LDVYTYNTLACGLRRANRMDE 371
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A+ +IE+G +PN S+ TL H E ++EA
Sbjct: 372 AKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEA 407
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 111/272 (40%), Gaps = 44/272 (16%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ YGAL+N + + AE+L+ M+ +G ++ + +N M+ Y + D+ +
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 341
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--DKAVNPNWTTFSTMATMY 292
M++ GI LDVY+YN +CG + +M+ L+++ +K V PN +++T+ +++
Sbjct: 342 MIMEKMGIELDVYTYNTL--ACGLR-RANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIH 398
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGV 350
G + +A R + V Y+ ++ Y G E R N + + P +
Sbjct: 399 CNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDI 458
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y A++ + G D A F
Sbjct: 459 YS--YAALVHG-----------------------------------HCVNGKVDVALRLF 481
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ + G KPN ++ L G +E R EA
Sbjct: 482 EEMKQRGSKPNLVAYTALISGLAKEGRSEEAF 513
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 110/272 (40%), Gaps = 9/272 (3%)
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+V L +V++ Y K ++ EM G++++ YN L + + +++
Sbjct: 140 SVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAE 199
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ ++M+ ++ + P T++ + + K E ++S+ D Y +++ Y
Sbjct: 200 MLKVME-NEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAY 258
Query: 328 GSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G V++ V G+ Y A+I+ +IG +E E + +
Sbjct: 259 CRAGNVRRASEVFD--ECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGI 316
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ + N M+ Y ++ DKA + + G + + ++ TLA G R R+ EA + L
Sbjct: 317 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 376
Query: 446 KGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
+ K RP V+ E DM
Sbjct: 377 RIMI----EKGVRPNHVSYTTLISIHCNEGDM 404
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L RA A+ L+ M +KG + + Y +++++ + E +
Sbjct: 352 DVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLF 411
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM G + +YN+ + +GS + E M+ K + P+ +++ + +
Sbjct: 412 REMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME-KKGLVPDIYSYAALVHGHCV 470
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT--N 352
G+V+ A ++ R + + V Y L+S G+ EE +++++ + G+T +
Sbjct: 471 NGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYD--NMLGDGLTPDD 528
Query: 353 LGYHAMISSL 362
Y A++ SL
Sbjct: 529 ALYSALVGSL 538
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 124/307 (40%), Gaps = 36/307 (11%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D Y L+ A R G A L+D+MRD+G + YNV++ K DE
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+++M G + +V ++NI L S S G E + M + K +P+ TF+ +
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNILIN 352
Query: 291 MYIKMG-----------------------------------QVEKAEESLRRVESRITGR 315
+ G ++++A E L R+ SR
Sbjct: 353 FLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
D V Y+ +L+ GK E+ + N S + Y+ +I LA+ G K+
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+E + D + ++ +EG D+A FF+ G +PN+ ++ ++ G +
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKT 532
Query: 436 RRILEAL 442
R+ A+
Sbjct: 533 RQTDRAI 539
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 113/254 (44%), Gaps = 5/254 (1%)
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
+AE L+ M KG++ + +N+++ + ++ +M + G + + SYN L
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLL 386
Query: 254 SSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ +KM+ E ++ V + P+ T++TM T K G+VE A E L ++ S+
Sbjct: 387 HGFCKE---KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
+ Y+ ++ GK + ++ + R+ + Y +++ L+R G ++
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
K F E+ + + N +M K D+A F +I G KP TS+ L EG
Sbjct: 504 IKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEG 563
Query: 432 HIRERRILEALSCL 445
E EAL L
Sbjct: 564 LAYEGMAKEALELL 577
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 115/264 (43%), Gaps = 8/264 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
L+ + R A +++ + G + YNVM++ Y K E + S++ M
Sbjct: 142 TLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-- 199
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
+ DV +YN L S G ++ V + M + + P+ T++ + + V +
Sbjct: 200 -VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM-LQRDCYPDVITYTILIEATCRDSGVGQ 257
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A + L + R D V Y+ L++ G+ +E + N S + ++ ++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
S+ G EK+ + L + + P + N+++++ ++G +A + + G
Sbjct: 318 SMCSTGRWMDAEKLLADML--RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGC 375
Query: 419 KPNSTSWETLAEGHIRERRILEAL 442
+PNS S+ L G +E+++ A+
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAI 399
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/304 (16%), Positives = 116/304 (38%), Gaps = 38/304 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L + + A ++D+M + + Y +++ + + ++
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLL 262
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--------------------- 273
EM+++G DV +YN+ ++ +G ++ M
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 274 -------------VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
+ K +P+ TF+ + + G + +A + L ++ + + Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSY 382
Query: 321 HYLLSLYGSVGKKEEV--YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
+ LL + K + Y + R +P + Y+ M+++L + G +E +I +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT--YNTMLTALCKDGKVEDAVEILNQL 440
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
S S N ++ K G KA + + + KP++ ++ +L G RE ++
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 439 LEAL 442
EA+
Sbjct: 501 DEAI 504
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 157/352 (44%), Gaps = 17/352 (4%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI----QLDLIAKVHGVASAEDFF 166
+++ L K R+ + A +++ M G R + A + + L+AK S D
Sbjct: 133 KLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYTALVSAYGESGLLAKAF---STVDEM 189
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
S+ D D Y L+N + ++ +M G ++ +N ++ Y K K
Sbjct: 190 KSVSDCKPDVYTYSVLINICTKLHRFDLIGRILSEMSYLGVECSTVTFNTIINGYGKAKM 249
Query: 227 YDEVESMVSEMKEKGIRL-DVYSYNIWLSSCGSQGSTEKME---GVFELMKVDKAVNPNW 282
+ E+E+ ++ M E G + D++++N + + G+ G EKME F+LM ++P+
Sbjct: 250 FREMENSLTNMIEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQLM----GISPDI 305
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
TF+ + Y K G EK + ++ R V Y+ ++ +G G E + +
Sbjct: 306 KTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIENMDEYFKT 365
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ + + Y +++S+ ++ G + + I + + D N +++ Y + G+
Sbjct: 366 MKHLGMKPNAITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNCIINAYGQAGD 425
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL-KGAFAAEG 453
DK F + E P++ ++ T+ + + R + + EA L K AA+G
Sbjct: 426 VDKMAELFLEMRERECMPDNVTFATMIQAY-RGQGMTEAAQALEKMMLAAKG 476
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 148/326 (45%), Gaps = 14/326 (4%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRG-ERFRLSASDAAIQ--LDLIAKVHGVASAEDFFL 167
+V++ L K R+YK A++V+ RG E++ S A+ +D + K V A FL
Sbjct: 162 KVMRRLAKARKYKDAIDVF-----RGIEKYGASKDREALNVLMDALVKEGDVEDAHSAFL 216
Query: 168 SLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
D + D + L++ Y +ARM A ++++M G+ + Y+ + Y + K+
Sbjct: 217 EFKDCITLDSSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKD 276
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+ VE++ EM+EKG + +V +Y + + G + V+E MK + + P+ +S
Sbjct: 277 FRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCL-PDSKFYS 335
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR-- 344
++ + + G+++ A + +E + R+ Y+ ++S + + ++
Sbjct: 336 SLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERMEGD 395
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S P V Y ++ R I+ ++ + S D L+++ + + G +
Sbjct: 396 SCKPDVKT--YAPLLKMCCRRKSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLE 453
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAE 430
A +F + +G P +++ L E
Sbjct: 454 HACFYFQEAVLKGMVPMVKTFKALVE 479
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL---RRVESRITGRD 316
G +K ++ L++ K +N + + +T + + ++ + K ++++ R +E +D
Sbjct: 133 GKFKKFSLMWSLVEQMKGLN-GYVSLATASKVMRRLAKARKYKDAIDVFRGIEKYGASKD 191
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
R + L+ G E+ + + ++ + + ++ +I + KI E
Sbjct: 192 REALNVLMDALVKEGDVEDAHSAFLEFKDCIT-LDSSSFNILIHGYCKARMFVVARKIME 250
Query: 377 EWLSVKSSYDPRIAN--LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
E K + P + + ++ Y ++ +F EA F+ + E+G KPN ++ T+ +
Sbjct: 251 EM--EKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYTTVMHALGK 308
Query: 435 ERRILEAL 442
R++ EAL
Sbjct: 309 ARQLNEAL 316
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 123/274 (44%), Gaps = 13/274 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D YG ++N + RG+ +L L+ KM + YN ++ K K D+
Sbjct: 222 DLVTYGTVVNGLCK---RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ +EM KGIR DV++Y+ +S + G + M +++ +NPN TFS +
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDA 337
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPG 349
++K G++ +AE+ + R D Y L++ + + +E ++ L + FP
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 350 VTNLGYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
V Y +I + + EGME +F E + ++ + + + D A+
Sbjct: 398 VVT--YSTLIKGFCKAKRVEEGME-LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F ++ G PN ++ L +G + ++ +A+
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 124/272 (45%), Gaps = 9/272 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +LLN Y ++ +A L+D+M + GY + + ++ + E ++V
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M ++G + D+ +Y ++ +G + + + M+ K + + ++T+ K
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYNTIIDGLCK 270
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
++ A ++++ D Y L+S + G+ + R+ + + R + P V
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFF 410
+ A+I + + G + EK+++E +K S DP I +++ + D+A+ F
Sbjct: 331 --FSALIDAFVKEGKLVEAEKLYDEM--IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+I + PN ++ TL +G + +R+ E +
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 146/357 (40%), Gaps = 40/357 (11%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
S+L EKG ++ L K++ AL ++ M+N+G R
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR------------- 290
Query: 152 LIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
PD Y +L++ +A L+ M ++ +
Sbjct: 291 ------------------PDVF----TYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
+ ++ ++ ++K + E E + EM ++ I D+++Y+ ++ ++ + +FEL
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M + K PN T+ST+ + K +VE+ E R + R + V Y L+ +
Sbjct: 389 M-ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA- 390
+ V+ SV L Y+ ++ L + G + +FE +L +S+ +P I
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE-YLQ-RSTMEPDIYT 505
Query: 391 -NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
N+M+ K G + F ++ +G PN ++ T+ G R+ EA S LK
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 101/236 (42%), Gaps = 2/236 (0%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D + Y L+ + +A+ L +M +G +++ Y ++ + + ++ D
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ + +M G+ ++ +YNI L G K VFE ++ + P+ T++ M
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ-RSTMEPDIYTYNIMIE 511
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
K G+VE E + + + + Y+ ++S + G KEE + + P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
+ Y+ +I + R GD E ++ +E S + D L+ + + +G DK+
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM-LHDGRLDKS 626
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 97/218 (44%), Gaps = 7/218 (3%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELM 272
+N +++ K+ +++ V S+ +M+ GI D+Y+Y+I+++ C + + + ++M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL-SLYGSVG 331
K+ P+ T S++ Y ++ A + ++ D + L+ L+
Sbjct: 146 KL--GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 332 KKEEVYRVWNLY-RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
E V V + R P + Y +++ L + GDI+ + ++ K D I
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVT--YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
N ++ K + D A F + +G +P+ ++ +L
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 124/285 (43%), Gaps = 9/285 (3%)
Query: 162 AEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AED + D D + L++ + + + L+++M + G + Y ++
Sbjct: 312 AEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVIN 371
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAV 278
+ K DE ++ M G + + SY I L C ++ + E + +++ +
Sbjct: 372 GFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQ--QGC 429
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
PN TF+T+ K G E+A E L+++ D + Y ++ G GK EE
Sbjct: 430 LPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 489
Query: 339 VWNLYRSVFPGVT--NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
+ N+ + G+T + Y +M S+L+R G + + ++F+ D + N ++S
Sbjct: 490 LLNVM--INKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISS 547
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
K D+A FF ++ G PN +++ L G E + EA
Sbjct: 548 LCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREA 592
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/267 (18%), Positives = 119/267 (44%), Gaps = 9/267 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R+Y +++ + A ++ +M G + + YN ++ + ++E E ++
Sbjct: 257 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 316
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM ++ LD ++NI + G +++ + E M ++ P+ T++T+ + K
Sbjct: 317 AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LEHGCIPDVITYTTVINGFCK 375
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS----VGKKEEVYRVWNLYRSVFPGV 350
G V++A L+ + + + + Y +L V +E + + + + P
Sbjct: 376 EGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM--IQQGCLP-- 431
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ ++ +I+ + + G E ++ ++ L S D + ++ K G ++A
Sbjct: 432 NPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 491
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERR 437
N +I +G PN+ + ++A RE R
Sbjct: 492 NVMINKGITPNTIIYSSMASALSREGR 518
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 6/268 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L++AY ++ AE L +M+ KG S YN++M Y + + + +E+++ EM
Sbjct: 350 VYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEM 409
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ G+ +V SY +S+ G Q M L + P +++ + Y G
Sbjct: 410 QDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGW 469
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
EKA + ++ Y LL + G + + ++W L S T + ++
Sbjct: 470 HEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNI 529
Query: 358 MISSLARIGD-IEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
++ A+ G +E + IFE K + P + N++M+ Y + G + +
Sbjct: 530 LLDGFAKQGHYMEARDVIFEFG---KIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMT 586
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEAL 442
KP+S ++ T+ ++R R A
Sbjct: 587 SLNLKPDSITYSTMIYAYVRVRDFKRAF 614
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 174/419 (41%), Gaps = 20/419 (4%)
Query: 21 QPLPCKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRK- 79
+PLPC I F +L SAI Q V+ Q+ G P I +IF
Sbjct: 87 KPLPCIIQ--FAKL--LSAIVKMGQYYDVVISLSKQMELVGL-----SPNIYTLSIFMNC 137
Query: 80 LSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERF 139
+ LG SVL K G T ++ L K + A+E++D M +G +
Sbjct: 138 FCQLQRVDLG-FSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQP 196
Query: 140 RLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAEL 197
+ + I + + K+ A+A + + + Y L+++ R R+ A
Sbjct: 197 DVYTYNTII--NGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALD 254
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
+ M+ KG + Y ++ K + E ++++EM I D+ ++N+ + +
Sbjct: 255 IFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFC 314
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+G + GV + M + V PN T+S++ Y V +A + + ++ +
Sbjct: 315 KEGKVSEALGVLKTM-TEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNI 373
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
Y+ L++ Y + +E +++N +++ + P N+ Y+ +I ++G + + +F
Sbjct: 374 FSYNILINGYCKAKRIDEAMQLFNEMIHQGLTP--NNVSYNTLIHGFCQLGKLREAQDLF 431
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+ + D ++++ + K+G KA F ++ KPN + L +
Sbjct: 432 RNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCK 490
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/350 (18%), Positives = 155/350 (44%), Gaps = 5/350 (1%)
Query: 89 GSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI 148
+A +L E+ G ++ L + R AL+++ +M +G + + I
Sbjct: 216 AAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLI 275
Query: 149 Q-LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
Q L ++ ++ + SL + + D + L++ + + A ++ M + G
Sbjct: 276 QGLCKFSRWKEASALLNEMTSL-NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGV 334
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKME 266
+ + Y+ +M Y + E + M KG + +++SYNI ++ C ++ E M+
Sbjct: 335 EPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQ 394
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
E+ + + + PN +++T+ + ++G++ +A++ R + + D Y LL
Sbjct: 395 LFNEM--IHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDG 452
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
+ G + +R++ +S + + Y ++ ++ + G+ + K+F E
Sbjct: 453 FCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPH 512
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
++ +++ KEG D+A F ++ +G P+ S+ + G ++ +
Sbjct: 513 VQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHK 562
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 7/266 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ L+N + A L D M KG YN ++ KI E ++ +M+
Sbjct: 166 FTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKME 225
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G + ++ +Y+ + S C + E ++ +F MK K ++P+ T++++ K +
Sbjct: 226 EAGCQPNMVTYSTLIDSLCRDRLVNEALD-IFSYMKA-KGISPDIFTYTSLIQGLCKFSR 283
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGY 355
++A L + S D V ++ L+ + GK E V V P V Y
Sbjct: 284 WKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT--Y 341
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++ + D+ K+F ++ + N++++ Y K D+A FN +I
Sbjct: 342 SSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIH 401
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
+G PN+ S+ TL G + ++ EA
Sbjct: 402 QGLTPNNVSYNTLIHGFCQLGKLREA 427
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 101/236 (42%), Gaps = 15/236 (6%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+ ++ K+ E+ + + +M KG + DVY+YN ++ G T G+ + M+
Sbjct: 166 FTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKME 225
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ PN T+ST+ + V +A + ++++ D Y L+ +
Sbjct: 226 -EAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRW 284
Query: 334 EEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIE---GMEKIFEEWLSVKSSYDPR 388
+E + N S + P + ++ ++ + + G + G+ K E +P
Sbjct: 285 KEASALLNEMTSLNIMPDIVT--FNVLVDTFCKEGKVSEALGVLKTMTEM-----GVEPN 337
Query: 389 IANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ +M Y + +A F+ +I +G KPN S+ L G+ + +RI EA+
Sbjct: 338 VVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
P F+ + + +KMGQ SL + + + G P Y LS++ + ++ RV
Sbjct: 90 PCIIQFAKLLSAIVKMGQYYDVVISLSK-QMELVGLS--PNIYTLSIF--MNCFCQLQRV 144
Query: 340 WNLYRSVFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+L SV V LG + +I+ L ++G+ ++F++ ++ D N
Sbjct: 145 -DLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNT 203
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAE 452
+++ K G A + E G +PN ++ TL + R+R + EAL F+
Sbjct: 204 IINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALD----IFSYM 259
Query: 453 GAKSWRP 459
AK P
Sbjct: 260 KAKGISP 266
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 134/317 (42%), Gaps = 4/317 (1%)
Query: 108 ELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFL 167
++ V +LR +++ + + +W+ N+ FR + +D + E +L
Sbjct: 121 DIISVAVQLRLNKKWGPIILICEWIMNKST-FRPDVIVYNLLMDAYGQRSLYKDVESTYL 179
Query: 168 SLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
L ++ + Y LL AY ++ + AE + +MR G + ++ YN + +K
Sbjct: 180 ELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGG 239
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ + MK G + +Y + ++ G + + + +F+ M+ + PN TF
Sbjct: 240 NNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRC-KPNICTF 298
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ + + G EKAEE +++ D Y+ L+ Y G +++L +
Sbjct: 299 TALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQH 358
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ Y+ M+ + R G E + +FEE + + + L++S Y GN K
Sbjct: 359 MGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAK 418
Query: 406 AEAFFNSIIEEGGKPNS 422
E + + G KP++
Sbjct: 419 CEDIIGQMHKSGLKPDT 435
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 1/221 (0%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN++M Y + Y +VES E+ E +Y + L + G EK E VF M+
Sbjct: 158 YNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMR 217
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
++P+ ++ +K G KA E R++ Y L+++YG K
Sbjct: 218 -KYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKS 276
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+++ R+ + A++++LAR G E E+IFE+ D N +
Sbjct: 277 HMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNAL 336
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
M Y + G A F+ + G +P+ S+ + + + R
Sbjct: 337 MESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 377
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 4/172 (2%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LL+AY A E +I +M G + N M+ LY ++ ++ ++E + S M++
Sbjct: 406 LLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGP 465
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
R D+ +YNI ++ G G E+ME +F+L+ K + P+ T+++ Y + ++
Sbjct: 466 CRADISTYNILINVYGRAGFVERMEELFQLLPA-KNLEPDVVTWTSRIGAYSRKKLYKRC 524
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
E ++ D LLS + +E++ +V N+ R++ + L
Sbjct: 525 LELFEKMIDAGCYPDGGTAKVLLS---ACSSEEQIEQVTNVVRTMHKDLKTL 573
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 140/315 (44%), Gaps = 22/315 (6%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV------ 178
AL+ + +++N + AS + +D+ A++H + SL ++ R+
Sbjct: 71 ALQFFHFLDNHHREYVHDASSFDLAIDIAARLHIHPTV----WSLIHRMRSLRIGPSPKT 126
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ + Y + A L M + G +N ++ + K K ++ + ++
Sbjct: 127 FAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 186
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ D +YN+ ++ C + + + +E + E+ VD+ +NPN TT++TM + + GQ
Sbjct: 187 GR-FSADTVTYNVIVNGWCLIKRTPKALEVLKEM--VDRGINPNLTTYNTMLQGFFRAGQ 243
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+ +A E ++ R D V Y ++ +G G+ + V++ + V P V Y
Sbjct: 244 IRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVAT--Y 301
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSI 413
+A I L + +E +FEE V+ Y+P + N+++ G F + E +
Sbjct: 302 NAFIQVLCKKDSVENAVVMFEEM--VRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRM 359
Query: 414 IEEGGKPNSTSWETL 428
EG +PN ++ +
Sbjct: 360 ENEGCEPNFQTYNMM 374
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 96/251 (38%), Gaps = 41/251 (16%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
LD++ K V A + F +L D Y ++N + + A ++ +M D+G
Sbjct: 166 LDVLCKSKRVEKAYELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGIN 225
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ YN M+ + + + + EMK++ +DV +Y + G G ++ V
Sbjct: 226 PNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNV 285
Query: 269 FELM----------------------------------KVDKAVNPNWTTFSTMATMYIK 294
F+ M V K PN TT++ +
Sbjct: 286 FDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFH 345
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG--VTN 352
G+ + EE ++R+E+ + Y+ ++ Y EV + L+ + G + N
Sbjct: 346 AGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC---SEVEKALGLFEKMGTGDCLPN 402
Query: 353 L-GYHAMISSL 362
L Y+ +IS +
Sbjct: 403 LDTYNILISGM 413
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 11/147 (7%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y A + + NA ++ ++M KGY + YNV++ ++ E ++ M
Sbjct: 300 TYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRM 359
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT-MYIK-- 294
+ +G + +YN+ + EK G+FE M + PN T++ + + M+++
Sbjct: 360 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCL-PNLDTYNILISGMFVRKR 418
Query: 295 ------MGQVEKAEESLRRVESRITGR 315
G A+E L R++S+ GR
Sbjct: 419 SEDMVVAGNQAFAKEIL-RLQSKSGGR 444
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 118/298 (39%), Gaps = 36/298 (12%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ +A+M A+ + M DKG ++ Y ++ Y+ I ++ EV M+ EM
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMS 264
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G++ D Y Y + L G + +F+ + + K + PN T + + Y G +
Sbjct: 265 THGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSV-IRKGIKPNVTIYGILLHGYATEGSL 323
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+ L + D ++ + Y +E +++ R + Y A+
Sbjct: 324 SEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGAL 383
Query: 359 ISSLARIGDI------------EGM-----------------------EKIFEEWLSVKS 383
I +L ++G + EGM E++F E L
Sbjct: 384 IDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGI 443
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D N +M +EG +A+ + ++ G +P+ S+ TL +GH RI EA
Sbjct: 444 RLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEA 501
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 3/297 (1%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD 204
A+ LD + K A + F S+ + +YG LL+ Y +D M
Sbjct: 276 AVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVG 335
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
G + +N+M Y K DE + +M+++ + ++ +Y + + G +
Sbjct: 336 NGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDD 395
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
F M +D+ + P+ FS++ + + EKAEE V + D V ++ L+
Sbjct: 396 AVLKFNQM-IDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLM 454
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
G+ E R+ +L V + Y+ ++ G I+ K+ + +S+
Sbjct: 455 CNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLK 514
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D N ++ Y K D A + F ++ +G P+ ++ T+ G + R EA
Sbjct: 515 PDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 571
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 127/292 (43%), Gaps = 36/292 (12%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGAL++A + +A L ++M D+G ++ ++ + ++++ E + E+
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVL 439
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++GIRLD +N + + +G + + + +LM + V P+ +++T+ + G++
Sbjct: 440 DQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLM-LRVGVRPDVISYNTLVDGHCLTGRI 498
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN------------LYRSV 346
++A + L + S D+V Y+ LL Y + ++ Y ++ Y ++
Sbjct: 499 DEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTI 558
Query: 347 FPGVTNLG-----------------------YHAMISSLARIGDIEGMEKIFEEWLSVKS 383
G+ G Y+ +I+ L + ++ K+F S
Sbjct: 559 LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDL 618
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
D AN+M+ +K G + A F +I G P+ ++ +AE I+E
Sbjct: 619 QLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKE 670
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/365 (19%), Positives = 142/365 (38%), Gaps = 39/365 (10%)
Query: 120 RRYKHALEVYDWMNNRGERFRL-SASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDR 176
+R + ALE+ M + G+ + +D + K V A+ F + D +
Sbjct: 178 KRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNN 237
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y L++ Y+ ++ +M G Y V++ K E ++
Sbjct: 238 HTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDS 297
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+ KGI+ +V Y I L ++GS +M +LM V V+P+ F+ M Y K
Sbjct: 298 VIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLM-VGNGVSPDHHIFNIMFCAYAKKA 356
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN------------LYR 344
+++A ++ + + V Y L+ +G+ ++ +N ++
Sbjct: 357 MIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFS 416
Query: 345 SVFPGVTNLG-----------------------YHAMISSLARIGDIEGMEKIFEEWLSV 381
S+ G+ + ++ ++ +L R G + +++ + L V
Sbjct: 417 SLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRV 476
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D N ++ + G D+A + I+ G KP+ ++ TL G+ + RRI +A
Sbjct: 477 GVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDA 536
Query: 442 LSCLK 446
S +
Sbjct: 537 YSLFR 541
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 104/259 (40%), Gaps = 44/259 (16%)
Query: 225 KEYDE-VESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKME---------------- 266
K DE + ++ M E G DV+SY+I L C + + E +E
Sbjct: 142 KRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPN 201
Query: 267 ---------------------GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
GVF+ M +DK V PN T++ + Y+ +G+ ++ + L
Sbjct: 202 VVTYTTVIDGLCKAQMVDRAKGVFQHM-IDKGVRPNNHTYTCLIHGYLSIGKWKEVVQML 260
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLA 363
+ + + D Y LL G+ E +++ + + + P VT Y ++ A
Sbjct: 261 QEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTI--YGILLHGYA 318
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
G + M + + S D I N+M Y K+ D+A F+ + ++ PN
Sbjct: 319 TEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIV 378
Query: 424 SWETLAEGHIRERRILEAL 442
++ L + + R+ +A+
Sbjct: 379 TYGALIDALCKLGRVDDAV 397
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 97/242 (40%), Gaps = 36/242 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y LL+ Y +AR +A L +M KG + YN ++ + + E + +
Sbjct: 516 DKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELY 575
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M ++++Y+YNI ++ ++ +F + K + + T + M +K
Sbjct: 576 LSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSL-CSKDLQLDIFTANIMIGALLK 634
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+ E A + + S YG V E
Sbjct: 635 GGRKEDAMDLFATI----------------SAYGLVPDVET------------------- 659
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y + +L + G +E ++++F ++ + R+ N ++ W + G+ ++A A+ + +
Sbjct: 660 YCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLD 719
Query: 415 EE 416
E+
Sbjct: 720 EK 721
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 126/276 (45%), Gaps = 4/276 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y L +A ++ AE L+++M KG YN +++LY K + E S+ + M
Sbjct: 198 IYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRM 257
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +GI LD+ SYN + +G +M + K PN T++T+ Y K +
Sbjct: 258 EREGINLDIVSYNSLIYGFCKEG---RMREAMRMFSEIKNATPNHVTYTTLIDGYCKTNE 314
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+E+A + + +E++ V Y+ +L G+ + ++ N N+ +
Sbjct: 315 LEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNT 374
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I++ +IGD++ K + L DP ++ + K + A+ S+++ G
Sbjct: 375 LINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAG 434
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG 453
P+ ++ + +G+ ++ ++A+ L F + G
Sbjct: 435 FTPSYCTYSWIVDGY-NKKDNMDAVLALPDEFLSRG 469
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 127/322 (39%), Gaps = 49/322 (15%)
Query: 166 FLSLPDTLK-----------DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPY 214
FLS P L + +V L+ Y +++M +A + ++MR H
Sbjct: 105 FLSSPSVLSTLVRTHDNQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHAC 164
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV 274
V++ +K V + M + G+ ++Y YN +C G E+ E + M V
Sbjct: 165 TVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDV 224
Query: 275 DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
K V + T++T+ ++Y K G +A R+E D V Y+ L+ + G+
Sbjct: 225 -KGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMR 283
Query: 335 EVYRVWNLYRS-----------------------------------VFPGVTNLGYHAMI 359
E R+++ ++ ++PGV Y++++
Sbjct: 284 EAMRMFSEIKNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVT--YNSIL 341
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
L + G I K+ E K D N +++ Y K G+ A F N ++E G K
Sbjct: 342 RKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLK 401
Query: 420 PNSTSWETLAEGHIRERRILEA 441
P+ +++ L G + + A
Sbjct: 402 PDPFTYKALIHGFCKTNELESA 423
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL++ + + +A+ L+ M D G+ Y+ ++ Y K D V ++
Sbjct: 403 DPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALP 462
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E +GI LDV Y + S + E +F M+ K ++ ++++A Y
Sbjct: 463 DEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHME-GKGISGESVIYTSIAYAYWN 521
Query: 295 MGQVEKAEESLRRVESR 311
+G V A L + R
Sbjct: 522 VGNVSAASSMLEEMARR 538
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 4/262 (1%)
Query: 188 RARMRGNAELL---IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
R GN +L+ + M G A YNVM+ K + + + +M+E G+
Sbjct: 204 RLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSP 263
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
DV +YN + G GS E++ +F MK D P+ T++ + Y K ++ +A E
Sbjct: 264 DVVTYNSLIDGYGKVGSLEEVASLFNEMK-DVGCVPDIITYNGLINCYCKFEKMPRAFEY 322
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
+++ + V Y L+ + G + ++ R Y ++I + +
Sbjct: 323 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCK 382
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
G++ K+ + L + ++ K G +AE F S++++G PN
Sbjct: 383 AGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQV 442
Query: 425 WETLAEGHIRERRILEALSCLK 446
+ L G+I+ R+ +A+ LK
Sbjct: 443 YTALVHGYIKAERMEDAMKILK 464
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/267 (18%), Positives = 98/267 (36%), Gaps = 36/267 (13%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L++ Y + L ++M+D G + YN ++ Y K ++
Sbjct: 264 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF 323
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEMK G++ PN T+ST+ + K
Sbjct: 324 SEMKNNGLK------------------------------------PNVVTYSTLIDAFCK 347
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G ++ A + L + + Y L+ G E +++ N + +
Sbjct: 348 EGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 407
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y A++ L + G + E++F L S + ++ ++ Y+K + A +
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
E KP+ + ++ GH +R++ E
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLEET 494
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/358 (18%), Positives = 148/358 (41%), Gaps = 9/358 (2%)
Query: 89 GSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI 148
G+ +L D + G ++ ++ K A ++ + M G + + A
Sbjct: 353 GAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL- 411
Query: 149 QLDLIAKVHGVASAEDFFLS-LPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
LD + K + AE+ F S L D + +++VY AL++ Y++A +A ++ +M +
Sbjct: 412 -LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 470
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
+ Y ++ + ++ +E + ++ EMK +GI + + + G +
Sbjct: 471 IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDAL 530
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
F+ M+ D V T+ + + G VE A + R+ S + Y L+
Sbjct: 531 NFFQEMQ-DVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 589
Query: 327 YGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
E ++++ R + P +T + A+I + G+++ + +
Sbjct: 590 LCXNNCIESAKKLFDEMQCRGMTPDIT--AFTALIDGNLKHGNLQEALVLISRMTELAIE 647
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+D + ++S + + G +A FFN +IE+G P L + + ++ EA+
Sbjct: 648 FDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 705
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 120/255 (47%), Gaps = 9/255 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ V++R A L + +G++ Y ++ +K ++ E++ +EM
Sbjct: 827 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 886
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G + + YNI L+ G+TEK+ +F+ M VD+ +NP+ +++ + K GQ
Sbjct: 887 LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM-VDQGINPDIKSYTIIIDTLCKAGQ 945
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGY 355
+ R++ D + Y+ L+ G + EE ++N + + P + Y
Sbjct: 946 LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT--Y 1003
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSI 413
+++I L + G K++EE L+ + P + N ++ Y G+ D A A + +
Sbjct: 1004 NSLILHLGKAGKAAEAGKMYEELLT--KGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRM 1061
Query: 414 IEEGGKPNSTSWETL 428
I G PNS+++ L
Sbjct: 1062 IVGGCLPNSSTYMQL 1076
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 132/323 (40%), Gaps = 20/323 (6%)
Query: 110 CRVVKEL-RKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLS 168
C + EL R R EV+D M + + + A + G E S
Sbjct: 93 CNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGT---------FAAIFGGLGVEGGLRS 143
Query: 169 LPDTLKDRRVYGALLNAY---------VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
P L + G +LNAY V++ A + M G Y+V+M
Sbjct: 144 APVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMV 203
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
+ K ++ + V ++ EM+ G++ +VYSY I + G ++ + M+ ++
Sbjct: 204 AFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME-NEGCK 262
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
P+ T + + + G++ A++ +++ DRV Y LL +G G + V +
Sbjct: 263 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI 322
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
WN ++ + Y A+I +L ++G + ++F+E + N ++S ++K
Sbjct: 323 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 382
Query: 400 EGNFDKAEAFFNSIIEEGGKPNS 422
F A F + G KPN
Sbjct: 383 ADRFGDALELFKHMDIHGPKPNG 405
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 141/356 (39%), Gaps = 5/356 (1%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L + E G + ++ L + +R+ A + M N G + + IQ+
Sbjct: 217 LLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV-- 274
Query: 153 IAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ ++ A+D F + D DR Y LL+ + + + + M+ GY +
Sbjct: 275 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDN 334
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
+ Y ++ ++ E M EMK+KGI + YSYN +S +F+
Sbjct: 335 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 394
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M + PN T Y K G+ KA + ++S+ D V + +L
Sbjct: 395 HMDI-HGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 453
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
G+ RV++ +++ + Y MI ++ + KIF + + D
Sbjct: 454 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAV 513
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
N ++ K G D+A F + E +P ++ TL G RE ++ E + L+
Sbjct: 514 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 569
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 144/338 (42%), Gaps = 6/338 (1%)
Query: 109 LCRVVKELRKFRRYKHALEVY-DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF-- 165
LC ++ K K AL + D+ G + S+ + ++ I K G+ + +F
Sbjct: 652 LCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSL--MEGILKKAGIEKSIEFAE 709
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
++ D L+ + + A L+ K + G ++ + YN ++ +
Sbjct: 710 IIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDEN 769
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
D E + +EMKE G D ++YN+ L + G E+M V E M K + T+
Sbjct: 770 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH-RKGYESTYVTY 828
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+T+ + +K ++E+A + + S+ Y LL G+ E+ ++N
Sbjct: 829 NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 888
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
Y+ +++ G+ E + +F++ + + D + +++ K G +
Sbjct: 889 YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 948
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+F ++E G +P+ ++ L +G + +R+ EA+S
Sbjct: 949 GLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVS 986
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 99/246 (40%), Gaps = 3/246 (1%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+++M Y + + YN ++ K ++ M+ M KG D+ SYN +
Sbjct: 567 LLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV 626
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR-D 316
+ + +F MK K + P++ T T+ ++K+G +++A ++ + + D
Sbjct: 627 KEERYNEAFSIFCQMK--KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTD 684
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
R H L+ E+ + S + + +I L + ++ +
Sbjct: 685 RSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVK 744
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
++ S S + N ++ V E D AE F + E G P+ ++ L + +
Sbjct: 745 KFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSM 804
Query: 437 RILEAL 442
RI E L
Sbjct: 805 RIEEML 810
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K RR + A+++Y + ++G F + LD + K + AE+ F + +
Sbjct: 831 IISGLVKSRRLEQAIDLYYNLMSQG--FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 888
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAE----------------------LLID------- 200
+ +Y LLN + R+ GN E ++ID
Sbjct: 889 YGCKANCTIYNILLNGH---RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQ 945
Query: 201 ---------KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
++ + G + YN+++ K K +E S+ +EM++KGI ++Y+YN
Sbjct: 946 LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNS 1005
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
+ G G + ++E + + K PN T++ + Y G + A + R+
Sbjct: 1006 LILHLGKAGKAAEAGKMYEEL-LTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRM 1061
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 132/329 (40%), Gaps = 25/329 (7%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PDTLKDRRV 178
A++ Y+ M ++G + A +A L +AK + A+ F L PDT+
Sbjct: 424 AIQRYELMKSKGIVPDVVAGNAV--LFGLAKSGRLGMAKRVFHELKAMGVSPDTI----T 477
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++ +A A + M + L N ++ K DE + ++K
Sbjct: 478 YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 537
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E + +YN L+ G +G +++ + E M PN T++T+ K G V
Sbjct: 538 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM-YHSNYPPNLITYNTILDCLCKNGAV 596
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR-----VWNLYRSVFPGVTNL 353
A + L + ++ D Y+ + +YG V KEE Y + + + P L
Sbjct: 597 NDALDMLYSMTTKGCIPDLSSYNTV--IYGLV--KEERYNEAFSIFCQMKKVLIPDYATL 652
Query: 354 GYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
++ S +IG + E + I + +L S D + +M +K+ +K+ F
Sbjct: 653 --CTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEI 710
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
I G + L + ++++ LEA
Sbjct: 711 IASSGITLDDFFLCPLIKHLCKQKKALEA 739
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 144/330 (43%), Gaps = 12/330 (3%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE-DFFLSLPD--TLKDRR 177
+ K AL Y +M G S + + + + K G A F +P+ D
Sbjct: 135 QLKLALRFYRYMREMG--IPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSY 192
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG L+N R G A+ L +M K + + Y ++ + K+ D ++ EM
Sbjct: 193 TYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEM 252
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KGI+ +V++Y+ + G + + + ++M V + PN T+ST+ K G+
Sbjct: 253 ASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMM-VSRRHLPNMITYSTLVHGLCKEGK 311
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+++A E L R++ + D Y ++S + + K E + + + P
Sbjct: 312 LQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSL 371
Query: 356 HAMISSLARIG-DIEGMEKIFEEWLSVKS---SYDPRIANLMMSWYVKEGNFDKAEAFFN 411
H I ++ G E + F+ +LS+++ S D + + +++++ +G+ KA +
Sbjct: 372 HVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVD 431
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++ +G P+ +W + R++ E+
Sbjct: 432 EMVLDGCIPDEVTWNAVVCAFWDRRKVRES 461
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 5/230 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L YVRA +ID M KG +++ Y ++ Y K D+ +
Sbjct: 356 DSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLF 415
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S+MK+ G +VY+YN L+ G + TE + V MK++ PN T++TM + +
Sbjct: 416 SKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCA-PNRATWNTMLAVCSE 474
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVF-PGVTN 352
G+ + LR +++ D+ ++ L+S Y G + + +++ + +S F P VT
Sbjct: 475 EGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTT 534
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
Y+A++++LA GD + E + ++ + + +L++ Y K GN
Sbjct: 535 --YNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGN 582
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 174/419 (41%), Gaps = 27/419 (6%)
Query: 34 LHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAI----------FRKLS-- 81
L S++ L ++ S+ ++ + P + + I FR LS
Sbjct: 53 LQHLSSVPITTHTLTIVPPSLDNTKNFNKSVNSKHPTLGSDPIIDEDQFDDAKFRFLSDK 112
Query: 82 --LMDNPQLGSA-SVLNDWEKGGR-SLTKWELCRVVKELRKFRRYKHALEVYDW---MNN 134
L+ N +GS LND+ + L + + ++K L ++ AL +++W
Sbjct: 113 GKLLLNSVVGSPLHELNDFFNSVKFELLEADFPSLLKALDLSGNWERALLLFEWGWLHFG 172
Query: 135 RGERFRLSASDAAIQLDLIAK--VHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMR 192
+ RL + + ++ + H +AS + + D R Y +L+AY R+
Sbjct: 173 SDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKY 232
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI-KEYDEVESMVSEMKEKGIRLDVYSYNI 251
A L DKM G + YNVM+ +Y K+ + + + ++ EM+ KG+ D ++ +
Sbjct: 233 KRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCST 292
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+S+CG +G ++ +K++ P +++M ++ K G +A L+ +E
Sbjct: 293 VISACGREGMLDEARKFLAELKLN-GYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDN 351
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIE 369
D + Y+ L + Y G +E V + S V P + Y +I + + G +
Sbjct: 352 NCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNA--ITYTTVIDAYGKAGRED 409
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
++F + + + + N +++ K+ + + G PN +W T+
Sbjct: 410 DALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTM 468
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 144/338 (42%), Gaps = 31/338 (9%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
+ V D M ++G AI + +G A ED L L +KD G N
Sbjct: 376 GMAVIDTMTSKG------VMPNAITYTTVIDAYGKAGREDDALRLFSKMKD---LGCAPN 426
Query: 185 AYV----------RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
Y ++R ++L + M+ G A + +N M+ + + +++ V ++
Sbjct: 427 VYTYNSVLAMLGKKSRTEDVIKVLCE-MKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVL 485
Query: 235 SEMKEKGIRLDVYSYNIWLSS---CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
EMK G D ++N +SS CGS+ + KM G E++K P TT++ +
Sbjct: 486 REMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYG--EMVK--SGFTPCVTTYNALLNA 541
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRS-VFPG 349
G + AE ++ ++++ + Y LL Y G + +V +Y VFP
Sbjct: 542 LAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPS 601
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
L ++ S + + GME+ F++ D + N M+S + + F KA
Sbjct: 602 WILL--RTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREM 659
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKG 447
+ I E G +PN ++ L + ++RE +A LKG
Sbjct: 660 LHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKG 697
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 134/317 (42%), Gaps = 17/317 (5%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PDTL 173
R + LE+ D M ++G F I + + A F L P T+
Sbjct: 266 RSWGRILELLDEMRSKGLEFDEFTCSTVISA--CGREGMLDEARKFLAELKLNGYKPGTV 323
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
+Y ++L + +A + A ++ +M D S+ YN + Y++ DE ++
Sbjct: 324 ----MYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAV 379
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ M KG+ + +Y + + G G + +F MK D PN T++++ M
Sbjct: 380 IDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMK-DLGCAPNVYTYNSVLAMLG 438
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K + E + L ++ +R ++ +L++ GK V +V ++
Sbjct: 439 KKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKD 498
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFN 411
++ +ISS AR G K++ E VKS + P + N +++ G++ AE+
Sbjct: 499 TFNTLISSYARCGSEVDSAKMYGEM--VKSGFTPCVTTYNALLNALAHRGDWKAAESVIQ 556
Query: 412 SIIEEGGKPNSTSWETL 428
+ +G KPN TS+ L
Sbjct: 557 DMQTKGFKPNETSYSLL 573
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 117/308 (37%), Gaps = 46/308 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ + L+++Y R ++ + +M G+ YN ++ ++ ES++
Sbjct: 496 DKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVI 555
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST------- 287
+M+ KG + + SY++ L G+ +E V E D V P+W T
Sbjct: 556 QDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKV-EKEIYDGQVFPSWILLRTLVLSNHK 614
Query: 288 ----------------------------MATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
M +M+ + KA E L + +
Sbjct: 615 CRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFT 674
Query: 320 YHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y+ L+ LY K EEV + + SV P + Y+ +I R G ++ ++
Sbjct: 675 YNCLMDLYVREDECWKAEEVLK--GIQNSV-PEPDVVSYNTVIKGFCRKGLMQEAIRVLS 731
Query: 377 EWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
E + P I N +S Y FD+A +IE +P+ +++ L +G+ +
Sbjct: 732 EMTT--KGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCK 789
Query: 435 ERRILEAL 442
+ EA+
Sbjct: 790 AGKHEEAM 797
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 12/205 (5%)
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV-EKAE 302
LDV +Y L + G ++ +F+ M+ ++P T++ M +Y KMG+ +
Sbjct: 214 LDVRAYTTILHAYARSGKYKRAIDLFDKME-GIGLDPTLVTYNVMLDVYGKMGRSWGRIL 272
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-----NLYRSVFPGVTNLGYHA 357
E L + S+ D ++S G G +E + N Y+ PG + Y++
Sbjct: 273 ELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYK---PGT--VMYNS 327
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
M+ + G I +E D N + + YV+ G D+ A +++ +G
Sbjct: 328 MLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKG 387
Query: 418 GKPNSTSWETLAEGHIRERRILEAL 442
PN+ ++ T+ + + + R +AL
Sbjct: 388 VMPNAITYTTVIDAYGKAGREDDAL 412
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 138/328 (42%), Gaps = 10/328 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG ++ + +A A ++++M G + + + Y ++M Y + ++ + +M
Sbjct: 194 TYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDM 253
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G++ D+ YNI + + G +K GV E ++ ++ + P T++++ Y+K G
Sbjct: 254 VSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLL-PTIETYTSILDGYVKGGN 312
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
++KA E R+++ V Y+ LLS + E + N L V P Y
Sbjct: 313 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVP--NERSY 370
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
A+ AR GD+E +F+ + D ++ K G +A F I +
Sbjct: 371 TALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITD 430
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEES 475
G K N ++ T+ +G R+ + +A L + + +F KAC
Sbjct: 431 AGLKHNRITYCTMLDGWARKGELSKARDLLNDM----QKHGFHLDTICYTSFIKACFRSG 486
Query: 476 DMGSKEAFVALLRQPGYR-KEKDYMSLI 502
D +A++R+ + Y +LI
Sbjct: 487 DTEEVTETLAVMREKKLEVNARTYTTLI 514
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 113/270 (41%), Gaps = 1/270 (0%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R YG L++ Y R + A + MR + Y ++ Y + ++ + + E
Sbjct: 18 REYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEE 77
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M +GI+L+ + +S S G+ E E FE K + V P ++++ Y + G
Sbjct: 78 MLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLV-PGGIVYNSIVQAYCQAG 136
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+E E L ++E + Y +L+ + + +E+ ++ ++ T Y
Sbjct: 137 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 196
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ + G++ I EE S + I ++M Y + G+F A + ++
Sbjct: 197 CIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSA 256
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLK 446
G KP+ + L + R+ +AL L+
Sbjct: 257 GLKPDIVIYNILVHAFCKAGRMDKALGVLE 286
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 93/220 (42%), Gaps = 1/220 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +LL+ +AR NA L++++M G + Y + Y + + ++ M MK
Sbjct: 335 YNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMK 394
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++ + +D+ +Y L +C G+ ++ VF+ + D + N T+ TM + + G++
Sbjct: 395 KENLAIDIVAYGALLKACCKSGAMQRAAEVFQQI-TDAGLKHNRITYCTMLDGWARKGEL 453
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
KA + L ++ D + Y + G EEV + R V Y +
Sbjct: 454 SKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTL 513
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
I D + +E+ + D ++N ++S +
Sbjct: 514 IHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGLI 553
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 108/265 (40%), Gaps = 36/265 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V+ ++++ Y A AE +K + + + YN ++ Y + + VE+++++M
Sbjct: 89 VFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQM 148
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+E+G + ++ Y L+ EK F +K ++P T+ + ++ K G
Sbjct: 149 EEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKA-CGLSPTAATYGCIVKLFTKAGN 207
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ KA + L ++ +++ Y ++ Y
Sbjct: 208 MAKALDILEEMDKHGVSPNKMIYAMIMDGY------------------------------ 237
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
AR GD K++E+ +S D I N+++ + K G DKA +I
Sbjct: 238 -----ARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANR 292
Query: 418 GKPNSTSWETLAEGHIRERRILEAL 442
P ++ ++ +G+++ I +AL
Sbjct: 293 LLPTIETYTSILDGYVKGGNIQKAL 317
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 104/256 (40%), Gaps = 1/256 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ++L+ YV+ A + D+++ G + YN +++ K ++ + M++EM
Sbjct: 299 TYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEM 358
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G+ + SY G EK G+F+ MK + + + + + K G
Sbjct: 359 LANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN-LAIDIVAYGALLKACCKSGA 417
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+++A E +++ +R+ Y +L + G+ + + N + + + Y +
Sbjct: 418 MQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTS 477
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
I + R GD E + + K + R ++ ++ + D+A + + G
Sbjct: 478 FIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASG 537
Query: 418 GKPNSTSWETLAEGHI 433
+ +S L G I
Sbjct: 538 LQLDSALSNCLLSGLI 553
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 133/312 (42%), Gaps = 17/312 (5%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-- 169
++ L K R A V M+ RGE+ + +A ++ V A + F +
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNAL--MEGYCSRENVHEARELFNRMVK 328
Query: 170 ----PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
PD L Y L++ Y + +M A +L ++ +K YN ++
Sbjct: 329 RGLEPDVLN----YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
V+ ++ EM DV +YNI + + +G + GV +M + K V PN T+
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMM-MKKGVKPNIVTY 443
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LY 343
+ M Y V A++ R+ D + Y+ L++ Y +E ++ +
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH 503
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+++ P + + Y+++I L +G I ++++ +E S D N+++ + K F
Sbjct: 504 KNLIPDIAS--YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561
Query: 404 DKAEAFFNSIIE 415
DKA + F I+E
Sbjct: 562 DKAISLFRQIVE 573
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 119/257 (46%), Gaps = 5/257 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y AL++ + +A L ++ ++G + ++ YN ++ + + EV ++++M
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ + D Y++NI + + +G + +GV +M + P+ T++ + Y
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS-KRGEKPDIVTYNALMEGYCSREN 315
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
V +A E R+ R D + Y+ L+ Y +E ++ +++ P + + Y
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS--Y 373
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++I L G I ++K+ +E D N+++ KEG +A +++
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 416 EGGKPNSTSWETLAEGH 432
+G KPN ++ + +G+
Sbjct: 434 KGVKPNIVTYNAMMDGY 450
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 9/277 (3%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D+ YG L+N + A L+ +M + + Y+ ++ K +
Sbjct: 157 LFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALG 216
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ S++ E+GI LD +YN + C S G +++ + M V + V+P+ TF+ +
Sbjct: 217 LCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM-VRENVDPDDYTFNILIDAL 275
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGV 350
K G++ +A+ L + R D V Y+ L+ Y S E ++N + R + P V
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEA 408
N Y+ +I + ++ +F+E + + P IA N ++ G +
Sbjct: 336 LN--YNVLIDGYCKTKMVDEAMVLFKELCN--KNLVPTIASYNSLIDGLCNSGRISHVKK 391
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ + P+ ++ L + +E RILEAL L
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL 428
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 115/274 (41%), Gaps = 13/274 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY----MKIKEYDEVESMV 234
+ L+N Y A L+ + GY + + +N ++ + M K D ++++
Sbjct: 93 FTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLL 152
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++ G D ++Y ++ G + + + M+ +V PN +S + K
Sbjct: 153 AQ----GYLFDQFTYGTLINGLSKNGQIKAALHLLQEME-KSSVQPNLVMYSALIDGLCK 207
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G V A ++ R D V Y+ L+ SVG+ +EV ++ + +V P +
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDP--DD 265
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
++ +I +L + G I + + D N +M Y N +A FN
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNR 325
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+++ G +P+ ++ L +G+ + + + EA+ K
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFK 359
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 11/269 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L++A + A+ ++ M +G + YN +M Y + E +
Sbjct: 264 DDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELF 323
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ M ++G+ DV +YN+ + C ++ E M EL +K + P +++++
Sbjct: 324 NRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL--CNKNLVPTIASYNSLIDGLC 381
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVT 351
G++ ++ L + D V Y+ L+ G+ E V + + V P +
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIV 441
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LMMSWYVKEGNFDKAEAF 409
Y+AM+ ++ + IF VKS +P I N ++++ Y K D+A
Sbjct: 442 T--YNAMMDGYCLRNNVNVAKDIFNRM--VKSGLEPDILNYNVLINGYCKTEMVDEAIVL 497
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRI 438
F + + P+ S+ +L +G RI
Sbjct: 498 FKEMRHKNLIPDIASYNSLIDGLCNLGRI 526
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 14/203 (6%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-- 169
++ L K R AL V M +G + + +A +D + V A+D F +
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA--MMDGYCLRNNVNVAKDIFNRMVK 468
Query: 170 ----PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
PD L Y L+N Y + M A +L +MR K YN ++ +
Sbjct: 469 SGLEPDILN----YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
V+ ++ EM + G DV +YNI L + +K +F ++ + + P++ T
Sbjct: 525 RIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR--QIVEGIWPDFYTN 582
Query: 286 STMATMYIKMGQVEKAEESLRRV 308
+ K +++ AE++L+ +
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHL 605
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
R+ YG ++N Y R A +KMR +G S Y ++ Y ++ +E S V
Sbjct: 311 RKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVR 370
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+MKE+GI + + +Y+I +S G+ E + F+ K +K + N + + Y +
Sbjct: 371 KMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAK-EKHSSLNAIIYGNIIYAYCQR 429
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
++KAE +R +E YH ++ Y VG +++ V+ ++ + + Y
Sbjct: 430 CNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITY 489
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I+ A++G + ++ +E ++ + +++++ ++K ++ A A F +I+
Sbjct: 490 GCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIK 549
Query: 416 EGGKPN 421
+G KP+
Sbjct: 550 DGIKPD 555
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 156 VHGVASAED------FFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+HG AS D +F L D D Y ALL A ++ +A + +M +
Sbjct: 668 MHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNI 727
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
++ YN+++ + + + E ++ +MK +G++ D+++Y ++++C G ++
Sbjct: 728 PRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATK 787
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
E MK V PN T++T+ + + EKA ++ DR YH L++
Sbjct: 788 TIEEMK-SVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSL 846
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNL 353
S R + ++PG+ ++
Sbjct: 847 LS--------RATVAHGCIYPGILSV 864
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/252 (16%), Positives = 110/252 (43%), Gaps = 1/252 (0%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+ Y L+N +++ + NA + + + G + YN ++T + + + D V E
Sbjct: 522 KTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKE 581
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M+++ + ++ + +G +K VF++M++ + P T++ + ++
Sbjct: 582 MQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCI-PTVHTYNALILGLVEKR 640
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++EKAE+ L + + Y ++ Y S+G + + + R + Y
Sbjct: 641 KMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYE 700
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
A++ + + G ++ + +E + + I N+++ + + G+ +A + E
Sbjct: 701 ALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKRE 760
Query: 417 GGKPNSTSWETL 428
G +P+ ++ +
Sbjct: 761 GVQPDIHTYTSF 772
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 131/334 (39%), Gaps = 62/334 (18%)
Query: 156 VHGVA------SAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+HG A A D F + + + Y AL+ V R AE ++D+M G
Sbjct: 598 IHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGV 657
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ + Y +M Y + + + + ++++++G++LDVY+Y L +C G +M+
Sbjct: 658 SPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSG---RMQS 714
Query: 268 VFELMKVDKAVNPNWTTF--STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+ K A N TF + + + + G + +A + ++++
Sbjct: 715 ALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQM----------------- 757
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
K+E V P + Y + I++ ++ GD++ K EE SV
Sbjct: 758 ------KRE----------GVQPDIHT--YTSFINACSKAGDMQRATKTIEEMKSVGVKP 799
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ + +++ + + +KA + F + G KP+ + L S L
Sbjct: 800 NVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCL------------MTSLL 847
Query: 446 KGAFAAEGAKSWRPKPVNVINFFKACEEESDMGS 479
A A G P ++V CE DMG+
Sbjct: 848 SRATVAHGC--IYPGILSVCREMVDCELTVDMGT 879
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 38/270 (14%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG L+N Y + A + +M G + Y++++ ++K+K++ ++ ++
Sbjct: 488 TYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDL 547
Query: 238 KEKGIRLDVYSY-NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+ GI+ DV Y NI + CG + K+D+AV T+ M
Sbjct: 548 IKDGIKPDVVLYNNIITAFCG-------------MGKMDRAV-------CTVKEM----- 582
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++ + T R +P + + G + K +V+ + + P V Y+
Sbjct: 583 ---------QKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRM-SGCIPTVHT--YN 630
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
A+I L +E E+I +E S + +M Y G+ KA +F + +E
Sbjct: 631 ALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDE 690
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLK 446
G + + ++E L + + R+ AL+ K
Sbjct: 691 GLQLDVYTYEALLKACCKSGRMQSALAVTK 720
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 63/153 (41%)
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
P+ + M Y + G + +A E+ ++ +R Y L+ Y EE
Sbjct: 309 PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSC 368
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+ ++ + Y ++S A+ G+ E + F+E SS + I ++ Y +
Sbjct: 369 VRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQ 428
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
N DKAEA + EEG + T+ +G+
Sbjct: 429 RCNMDKAEALVREMEEEGIDAPIDIYHTMMDGY 461
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 150/342 (43%), Gaps = 22/342 (6%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHG------VASAEDF 165
V+K L R + AL++ M G R S + + + +HG V+ A +
Sbjct: 201 VIKSLCGDSRSQEALDMVQRMAKEGGR----CSPDVVSFNTV--IHGFFKQGEVSKACNL 254
Query: 166 F--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
F + + D Y ++++A +AR AE ++ +M DKG + YN ++ Y
Sbjct: 255 FNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSC 314
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
+ E M +M KG+ D +++ ++SS G ++ E +F+ M K P+
Sbjct: 315 SGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTT-KGHMPDIV 373
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
++S + Y G+ + + + + L+S + G +E V+
Sbjct: 374 SYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEM 433
Query: 344 --RSVFPGVTNLGYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
+ V P V Y +IS+ R+G + + MEK F + +S+ + + + ++ +
Sbjct: 434 QGQGVRPNVVT--YSTLISAFCRMGRLADAMEK-FSQMISIGIEPNTAVYHSLIHGFCMH 490
Query: 401 GNFDKAEAFFNSIIEEG-GKPNSTSWETLAEGHIRERRILEA 441
G+ KA+ F + ++ +G +PN + ++ E R+++A
Sbjct: 491 GDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDA 532
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 126/282 (44%), Gaps = 10/282 (3%)
Query: 162 AEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AE+ F ++ + D Y LL+ Y + L M DKG + N++++
Sbjct: 356 AEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILIS 415
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAV 278
+ K DE + +EM+ +G+R +V +Y+ +S+ G + ME +++ + +
Sbjct: 416 AHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISI--GI 473
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV---GKKEE 335
PN + ++ + G + KA+E + + S+ G R + S+ S+ G+ +
Sbjct: 474 EPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSK--GLHRPNIVFFSSIIHSLCIEGRVMD 531
Query: 336 VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMS 395
V+NL + T + ++++I +G +E + + +SV D N ++S
Sbjct: 532 AQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVS 591
Query: 396 WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
Y K G D F ++ + KP + ++ + +G +R R
Sbjct: 592 GYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGR 633
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 106/234 (45%), Gaps = 7/234 (2%)
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
+ +N ++ + K E + ++ +EM +KG+ DV +YN + + + +K E V
Sbjct: 233 VSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQ 292
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL---YG 328
M VDK V P+ T++ + Y G +++ + R++ S+ D V + +S +G
Sbjct: 293 M-VDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHG 351
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
EE+++ + + P + + Y ++ A G M +F +
Sbjct: 352 RSKDAEEIFQ-YMTTKGHMPDIVS--YSILLHGYATEGRFADMNNLFHSMADKGIVSNCH 408
Query: 389 IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
N+++S + K G D+A F + +G +PN ++ TL R R+ +A+
Sbjct: 409 CINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAM 462
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 117/266 (43%), Gaps = 6/266 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++A+ R +A +M G ++ Y+ ++ + + + + +SEM
Sbjct: 445 YSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM 504
Query: 239 EKGI-RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ R ++ ++ + S +G + VF L+ + P TF+++ Y +G+
Sbjct: 505 SKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLV-IHIGDRPTIVTFNSLIDGYCLVGK 563
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+EKA L + S D V + L+S Y GK ++ ++ L++ V P T + Y
Sbjct: 564 MEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKP--TTVTY 621
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ ++ L R G +K+F E + ++ D +++ + D+A F+ +
Sbjct: 622 NIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGA 681
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
K + T T+ + RR EA
Sbjct: 682 MDCKFDITILNTMINALYKVRRREEA 707
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 107/260 (41%), Gaps = 9/260 (3%)
Query: 159 VASAEDFFLSLPDTLKDRRV---YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
V A+D F +L + DR + +L++ Y A ++D M G + N
Sbjct: 529 VMDAQDVF-NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNN 587
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
+++ Y K + D+ + EM K ++ +YNI L G T + +F M +D
Sbjct: 588 TLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEM-ID 646
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ T+ + + ++A ++ + D + +++ V ++EE
Sbjct: 647 SGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREE 706
Query: 336 VYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
++ + + P V+ Y MI +L + G +E + +F + R+ N +
Sbjct: 707 ANDLFAAISTSGLVPNVST--YGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDI 764
Query: 394 MSWYVKEGNFDKAEAFFNSI 413
+ +++G+ KA + + +
Sbjct: 765 IRMLLQKGDIVKAGYYMSKV 784
>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
Length = 447
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/404 (19%), Positives = 169/404 (41%), Gaps = 23/404 (5%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL----PDTLKDRR 177
++ ALE+ D M + G R + I +I + L D +
Sbjct: 46 FQQALELLDEMKSNGVR-----PNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDCAPNVY 100
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++A ++ A L+ +M KG + + + YN ++ + K++ DEV ++ EM
Sbjct: 101 TYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEM 160
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++G R DV +Y + L S ++ + ++ V N + F+ ++T +
Sbjct: 161 SQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYN-SLFTALST-----AE 214
Query: 298 VEKAEESLRRVESRI---TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++ E+L +E I T ++V Y +L + + +E Y+V S ++
Sbjct: 215 GDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVS 274
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y ++ + A G ++ L D + N+++ + K G+ +A F S+
Sbjct: 275 YKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMY 334
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA-CEE 473
+ G P++ ++ TL + ++ A+ L A+ ++P + + K+ C E
Sbjct: 335 QRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQAD----FKPNVITYNSIIKSFCRE 390
Query: 474 ESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKND 517
+ + ++ F ++ + Y +L +EA + K +D
Sbjct: 391 QREEEARGIFQMMVDNGCFPDRVSYTTLKLSKNEAAIYDQKVHD 434
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 110/255 (43%), Gaps = 15/255 (5%)
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
YAV+ + Y ++M + K E+ + ++ EMK G+R +V + + + G +
Sbjct: 26 YAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVS--Q 83
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
+ ++ + PN T+ST+ K GQ +A + + + + V Y+ L+
Sbjct: 84 ALLHFRRIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDG 143
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
+ + + +EV + ++ G A + + I DI +E + ++ +
Sbjct: 144 FRKLERLDEVLM-------LLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE 196
Query: 387 PR----IANLMMSWYVKEGN-FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
R +L + EG+ +A + +I+EG +PN ++ T+ + R+ EA
Sbjct: 197 KRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEA 256
Query: 442 LSCLKGAFAAEGAKS 456
L + ++G K+
Sbjct: 257 YQVLLSMY-SQGCKT 270
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 141/335 (42%), Gaps = 27/335 (8%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG L+ + +A A L+D+M+ G + + + T+ + +V + +
Sbjct: 33 YGILMQGFCKAGEFQQALELLDEMKSNGVRPNVV---IHTTIIRGLCTAGKVSQALLHFR 89
Query: 239 EKG--IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
G +VY+Y+ + + G + G+ M V K +PN T++ + + K+
Sbjct: 90 RIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEM-VKKGCSPNVVTYNALIDGFRKLE 148
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLG 354
++++ L+ + R D + Y +L ++ +E YR+ N R+V +
Sbjct: 149 RLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNV------VT 202
Query: 355 YHAMISSLARI-GD-----IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
Y+++ ++L+ GD + +EK+ +E + + + R LM+ K D+A
Sbjct: 203 YNSLFTALSTAEGDRTTEALSLLEKMIQEG-TRPNQVNYRTVLLML---CKNSRLDEAYQ 258
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFF 468
S+ +G K + S++ L R ++L L G G K +NV+
Sbjct: 259 VLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELL-GRMLGSGY-ILDTKTMNVV-IH 315
Query: 469 KACEEESDMGSKEAFVALLRQPGYRKEKDYMSLIG 503
K C+ + + F ++ ++ Y +LIG
Sbjct: 316 KFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIG 350
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 17/293 (5%)
Query: 157 HGVASAEDFFL--SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPY 214
+ +A ED F LPD + Y LL A + A L+D+M DKG A + Y
Sbjct: 184 NALAVLEDMFRRGCLPDVV----TYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTY 239
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV 274
NV++ + ++ + + G + SYNI L + E E + E M
Sbjct: 240 NVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEM-A 298
Query: 275 DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
K PN TF+ + + + G VE A E L ++ + + Y+ LL + K++
Sbjct: 299 HKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAF---CKQK 355
Query: 335 EVYRVWNLY-----RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
++++ R +P + + Y+ ++++L R G+++ ++ + S
Sbjct: 356 KIHKAMEFVELMVSRGCYPDIVS--YNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLIS 413
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
N ++ K G +A + + +G +P+ ++ T+A G RE RI EA+
Sbjct: 414 YNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAV 466
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 141/336 (41%), Gaps = 16/336 (4%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAA---IQLDLIAKVHGVASAEDFFLSLPD--TLKDR 176
YK A+++ D M+++G A D + L+ I + V A +F +LP +
Sbjct: 217 YKQAMKLLDEMHDKG-----CAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNT 271
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y +L A +AE L+++M KG + + +N++++ + + ++ +
Sbjct: 272 VSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQ 331
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M + G + SYN L + Q K ELM V + P+ +++T+ T + G
Sbjct: 332 MPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM-VSRGCYPDIVSYNTLLTALCRNG 390
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+V+ A E L +++ + + Y+ ++ GK +E + + S + Y
Sbjct: 391 EVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYS 450
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+ S L R IE + F + + + N ++ K A F +I
Sbjct: 451 TIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISS 510
Query: 417 GGKPNSTSWETLA-----EGHIRERRILEALSCLKG 447
G PN +++ L EG ++E R L A C +G
Sbjct: 511 GCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 145/337 (43%), Gaps = 46/337 (13%)
Query: 110 CRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL 169
C +V L + + ++ +E+ D M G S+AA+ LI + + S E F L
Sbjct: 299 CTLVLGLCRIQEFEVGMEMMDEMIELG----YVPSEAAVS-GLIEGLIKMGSIEGAFELL 353
Query: 170 PDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
K + VY +++N+ + AELL M ++G + + Y +++ + +
Sbjct: 354 NKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRR 413
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
+ D ++M E GI VYSYN ++ G + E +F+ M VDK + P T
Sbjct: 414 AKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEM-VDKGLKPTVAT 472
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
++++ + Y K G V KA ++ +TG+ P
Sbjct: 473 YTSLISGYCKDGLVPKA----FKLYHEMTGKGIAP------------------------- 503
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ + A+I L +I + K+F+E + +K + N+++ + +EGN
Sbjct: 504 ------NTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTT 557
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+A + +I++G P++ ++ L G R+ EA
Sbjct: 558 RAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEA 594
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 128/303 (42%), Gaps = 14/303 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L++ Y + + A L +M KG A +++ + ++ +I + E + EM
Sbjct: 473 YTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMV 532
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMG 296
E I + +YN+ + +G+T + FEL+ + K ++P+ T+ + G
Sbjct: 533 ELKILPNEVTYNVLIEGHCREGNTTR---AFELLDEMIKKGLSPDTYTYRPLIAGLCSTG 589
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPGVTNLG 354
+V +A+E + + + D + Y LL + G+ +E V R + R + + +
Sbjct: 590 RVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVS-- 647
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +IS D + ++ E D I +++ ++K GN KA F+ +I
Sbjct: 648 YAVLISGALNQND-RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMI 706
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEE 474
EG PNS ++ L G + + EA K E P + F +E
Sbjct: 707 GEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAI----PNHITYGCFLDHLTKE 762
Query: 475 SDM 477
+M
Sbjct: 763 GNM 765
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 122/304 (40%), Gaps = 34/304 (11%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L + R ALLNA R R L D + + G Y V++ ++K++++ +
Sbjct: 187 LPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKE 246
Query: 233 MVSEMKEKGIRLDVYSYNIWLS----------------SCGSQG---------------- 260
++++ + G L + +YN++++ S G +G
Sbjct: 247 IINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLC 306
Query: 261 STEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
++ E E+M ++ P+ S + IKMG +E A E L +V +
Sbjct: 307 RIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLF 366
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
Y+ +++ GK EE ++++ ++ Y +I R ++ F +
Sbjct: 367 VYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM 426
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+ S N M++ K G AE F ++++G KP ++ +L G+ ++ +
Sbjct: 427 IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLV 486
Query: 439 LEAL 442
+A
Sbjct: 487 PKAF 490
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/267 (18%), Positives = 110/267 (41%), Gaps = 15/267 (5%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ L+ YV+ + + L+++ MRD G + ++ +I+++ +V + +
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G++ D Y Y + + K + + + + + T++ K +V
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAE-GNGCSLSIVTYNVFINGLCKSKRV 276
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY--- 355
+A E R + + D V Y +L + + +E + + + + LGY
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTY---CTLVLGLCRIQE----FEVGMEMMDEMIELGYVPS 329
Query: 356 ----HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+I L ++G IEG ++ + + + + N M++ K G ++AE F+
Sbjct: 330 EAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFS 389
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRI 438
+ E G PN ++ L +G R ++
Sbjct: 390 VMAERGLNPNDVTYTILIDGFGRRAKL 416
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 97/231 (41%), Gaps = 2/231 (0%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+ +M KG ++ Y +++ ++K + M +G + +Y ++
Sbjct: 666 LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLF 725
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G + + +F+ M V +A+ PN T+ K G +E A + L + + +
Sbjct: 726 KAGYVNEAKLLFKRMLVGEAI-PNHITYGCFLDHLTKEGNMENALQ-LHNAMLQGSFANT 783
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
V Y+ L+ Y +GK +E ++ ++ + + Y I + G+++ ++E
Sbjct: 784 VTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWEC 843
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
L D + N ++ G D+A N ++ G KP +++ +L
Sbjct: 844 MLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSL 894
>gi|302768815|ref|XP_002967827.1| hypothetical protein SELMODRAFT_88115 [Selaginella moellendorffii]
gi|300164565|gb|EFJ31174.1| hypothetical protein SELMODRAFT_88115 [Selaginella moellendorffii]
Length = 289
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 39/258 (15%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV--HSLPYNVMMTLYMKI-KEYDEV 230
KD +Y ALL+A+ +A G E + D RD ++ + L YN++M Y+K E +V
Sbjct: 44 KDAGMYNALLHAFCKA---GKLEAVDDLFRDMKQSIRPNHLSYNILMHSYVKAGHELTKV 100
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
S+ EM +G++ V SYNI +++C + + F MK + + PN T+S++
Sbjct: 101 VSVFKEMYLRGVKASVASYNILIAACATGKQAWEARVFFSNMK-KQDLEPNVITYSSLIN 159
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
+Y+ G V +L + + V P V
Sbjct: 160 VYVASGDVGNCAAALDVLREMVKAE------------------------------VMPNV 189
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
T + ++ + G IE KIF+ + N++M+ Y K G+ A++ F
Sbjct: 190 TT--FSCLLHGYGQEGRIEEAMKIFQTMKDLGIEPSAITFNILMTMYSKSGHHALAQSCF 247
Query: 411 NSIIEEGGKPNSTSWETL 428
+ +IE G +P S+ +L
Sbjct: 248 HEMIESGLEPTYVSFLSL 265
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 154/343 (44%), Gaps = 16/343 (4%)
Query: 103 SLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASA 162
SL + ++ L + RR+ + +++ M G+R +A + LDL K +
Sbjct: 71 SLDVYAYTSLISILSRARRFDEGITLFETMQREGQRG--NAVTYNVMLDLYGKR---GDS 125
Query: 163 EDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
D SL +KD + Y ++ A ++ A L +M++ G + + YN
Sbjct: 126 WDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNA 185
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
++ +Y K + E ++ EM+ GI ++ +YN +++ G ++ + + + + K
Sbjct: 186 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSL-LSK 244
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
+ P+ T+ T+ + + + + EKA E+ + + V Y+ L+ +YG + K +++
Sbjct: 245 GLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDM 304
Query: 337 YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMM 394
+V+ + + +++++ S G + + +F E ++ Y P + N+++
Sbjct: 305 MKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREM--KRAGYMPGVDTFNILI 362
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
Y + G D + + ++ G +P ++ L RE R
Sbjct: 363 ECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGR 405
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 151/343 (44%), Gaps = 35/343 (10%)
Query: 105 TKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAED 164
T EL VK L + ++K ALEV++W+ + + F+L A L ++ + +A +
Sbjct: 1 TDSELVYFVKALGRQGKWKKALEVFEWIR-KHDCFKLRGVATASILSVLGNHEQLPAALE 59
Query: 165 FFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
F SL +D+ Y++ Y ++++ +
Sbjct: 60 LFESLK--------------------------------QDESYSLDVYAYTSLISILSRA 87
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST-EKMEGVFELMKVDKAVNPNWT 283
+ +DE ++ M+ +G R + +YN+ L G +G + ++++ +F+ MK D ++P+
Sbjct: 88 RRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMK-DLEISPDDY 146
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
T++TM T I+ ++A + ++ +RV Y+ LL +YG G +E +
Sbjct: 147 TYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEM 206
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+ + Y+ +I++ AR G + + + LS D ++S + + +
Sbjct: 207 EAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERY 266
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+KA F + + PN ++ L + + R ++ + + K
Sbjct: 267 EKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 309
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 11/248 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+R Y ALL+ Y + M A L+ +M G + + + YN ++ Y + DE ++
Sbjct: 179 NRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALK 238
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEK-MEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ KG+ D ++Y +S+ EK +E E+ K + PN T++ + +Y
Sbjct: 239 KSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTN--CTPNIVTYNILIDIYG 296
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVT 351
+M +++ + + ++ + D V ++ LL +G+ G EV V+ + PGV
Sbjct: 297 RMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVD 356
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAF 409
++ +I R G ++ I++ L ++ P + +M+ +EG + + E
Sbjct: 357 T--FNILIECYGRCGYVDYSVDIYKGLL--RTGLQPTVPTFAALMASLAREGRWQQCEKV 412
Query: 410 FNSIIEEG 417
+ E G
Sbjct: 413 SQEMAEAG 420
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 105/249 (42%), Gaps = 9/249 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ AY RA + A L + KG Y +++ + + + Y++ +EM
Sbjct: 217 TYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEM 276
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++ ++ +YNI + G + M VF+ M+ +K P+ T++++ + G
Sbjct: 277 RKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQ-EKNCTPDLVTWNSLLKSFGNCGM 335
Query: 298 VEKAEESLRRVE--SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
+ + R ++ + G D ++ L+ YG G + ++ L + P V
Sbjct: 336 LTEVSNVFREMKRAGYMPGVD--TFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPT- 392
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+ A+++SLAR G + EK+ +E ++ Y G F + + + +
Sbjct: 393 -FAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDEL 451
Query: 414 IEEGGKPNS 422
+ +P S
Sbjct: 452 EKSAKQPLS 460
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 72/158 (45%)
Query: 275 DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
D +P+ F+ M +M K G +E+A + L + D V Y+ L+S+YG G
Sbjct: 489 DNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYH 548
Query: 335 EVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
+ V + R + Y+ ++ S + G ++ ++F + ++ + D N ++
Sbjct: 549 KAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLV 608
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
Y G + +A + + E G +P +++ L +G+
Sbjct: 609 GSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 144/349 (41%), Gaps = 26/349 (7%)
Query: 106 KWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHG-VASAED 164
++ C ++ + RY+ ALE + M + + + + +++ ++G + +D
Sbjct: 250 EFTYCTLISAFNRAERYEKALETFTEMR------KTNCTPNIVTYNILIDIYGRMEKLDD 303
Query: 165 F-----FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
F+ + D + +LL ++ M + +M+ GY +N+++
Sbjct: 304 MMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIE 363
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
Y + D + + G++ V ++ ++S +G ++ E V + M + +
Sbjct: 364 CYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEM-AEAGLQ 422
Query: 280 PNWTTFSTMATMYIKMGQ-------VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
+ + + Y GQ +++ E+S ++ S I + ++L+
Sbjct: 423 LSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKT-----FVLAYCKCCMD 477
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
E + LY + + ++AMIS A+ G IE K+ EE + D N
Sbjct: 478 NEAQLALNQLYDNGHSPDIKV-FNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNC 536
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+MS Y +EG + KAE + + G PN ++ TL + + R+ +A
Sbjct: 537 LMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDA 585
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 107/249 (42%), Gaps = 4/249 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++A+ RA A +MR + + YN+++ +Y ++++ D++ +
Sbjct: 249 DEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVF 308
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M+EK D+ ++N L S G+ G ++ VF MK P TF+ + Y +
Sbjct: 309 KFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMK-RAGYMPGVDTFNILIECYGR 367
Query: 295 MGQVEKAEESLRRVESRITGRDRVP-YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
G V+ + + + + R + VP + L++ G+ ++ +V +++
Sbjct: 368 CGYVDYSVDIYKGL-LRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDA 426
Query: 354 GYHAMISSLARIGDIEGMEKIFEEW-LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ +I S A G + K +E S K + + Y K ++A+ N
Sbjct: 427 CHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQ 486
Query: 413 IIEEGGKPN 421
+ + G P+
Sbjct: 487 LYDNGHSPD 495
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ Y R M AE ++ +MR G A + + YN ++ Y K D+ +
Sbjct: 530 DGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVF 589
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+M +R D +++N + S S G ++ V E M + P TF + Y
Sbjct: 590 GDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYM-TEHGCQPTQITFKALLDGY 646
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +V+ A+++ + A L++++R + YN +M++Y + Y + E ++
Sbjct: 495 DIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVM 554
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM+ G ++ +YN L S G + VF M V V P+ TF+T+ Y
Sbjct: 555 SEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM-VAARVRPDNFTFNTLVGSYSS 613
Query: 295 MGQVEKA 301
+G ++A
Sbjct: 614 LGLYKEA 620
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 125/276 (45%), Gaps = 6/276 (2%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
S PD++ +++ Y ++ +A L+D+M G V++L YN ++ Y + K+
Sbjct: 60 SCPDSVTPLSA-SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDD 118
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
D V M+ M+ +GI V +Y I + + K+E VFE MK K ++ + +S+
Sbjct: 119 DRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK-SKNLSGDVYFYSS 177
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+ Y + G V +A E + Y L++ + +G+ E + +
Sbjct: 178 VINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 237
Query: 348 PGVTNLGYHAMISSLARIGDIE-GME-KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
G+ + ++ MI R ++ +E K+ E + ++ D N + + D+
Sbjct: 238 VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIE--LDVYTYNTLACGLRRANRMDE 295
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A+ +IE+G +PN S+ TL H E ++EA
Sbjct: 296 AKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEA 331
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 111/272 (40%), Gaps = 44/272 (16%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ YGAL+N + + AE+L+ M+ +G ++ + +N M+ Y + D+ +
Sbjct: 206 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 265
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--DKAVNPNWTTFSTMATMY 292
M++ GI LDVY+YN +CG + +M+ L+++ +K V PN +++T+ +++
Sbjct: 266 MIMEKMGIELDVYTYNTL--ACGLR-RANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIH 322
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGV 350
G + +A R + V Y+ ++ Y G E R N + + P +
Sbjct: 323 CNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDI 382
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y A++ + G D A F
Sbjct: 383 YS--YAALVHG-----------------------------------HCVNGKVDVALRLF 405
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ + G KPN ++ L G +E R EA
Sbjct: 406 EEMKQRGSKPNLVAYTALISGLAKEGRSEEAF 437
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 110/272 (40%), Gaps = 9/272 (3%)
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+V L +V++ Y K ++ EM G++++ YN L + + +++
Sbjct: 64 SVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAE 123
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ ++M+ ++ + P T++ + + K E ++S+ D Y +++ Y
Sbjct: 124 MLKVME-NEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAY 182
Query: 328 GSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G V++ V G+ Y A+I+ +IG +E E + +
Sbjct: 183 CRAGNVRRASEVFD--ECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGI 240
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ + N M+ Y ++ DKA + + G + + ++ TLA G R R+ EA + L
Sbjct: 241 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 300
Query: 446 KGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
+ K RP V+ E DM
Sbjct: 301 RIMI----EKGVRPNHVSYTTLISIHCNEGDM 328
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L RA A+ L+ M +KG + + Y +++++ + E +
Sbjct: 276 DVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLF 335
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM G + +YN+ + +GS + E M+ K + P+ +++ + +
Sbjct: 336 REMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME-KKGLVPDIYSYAALVHGHCV 394
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT--N 352
G+V+ A ++ R + + V Y L+S G+ EE +++++ + G+T +
Sbjct: 395 NGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYD--NMLGDGLTPDD 452
Query: 353 LGYHAMISSL 362
Y A++ SL
Sbjct: 453 ALYSALVGSL 462
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 143/346 (41%), Gaps = 46/346 (13%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL+N +V+ G A + ++M + +++ Y ++ KI + ++ E +
Sbjct: 336 DHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLF 395
Query: 235 SEMKEKGIRLDVYSYNIWLSS----------------------------CGS-------Q 259
SEM GI+ D+ +YN + CG+
Sbjct: 396 SEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHC 455
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G + +F+ M + + PN ++T+ +K G+ E+A + L ++ + D
Sbjct: 456 GDLTRANELFQEM-ISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFC 514
Query: 320 YHYLLSLYGSVGKKEE--VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y+ ++ + GK EE Y V + + + P V Y A I R G+++ E+ F E
Sbjct: 515 YNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYT--YGAFIHGYCRAGEMQAAERSFIE 572
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
L + + I ++ Y K+GN KA A F ++++G P+ + L G + +
Sbjct: 573 MLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGK 632
Query: 438 ILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAF 483
+ EA+ G F+ K P + +E D+ K AF
Sbjct: 633 LQEAM----GVFSELLDKGLVPDVFTYTSLISNLCKEGDL--KAAF 672
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 8/270 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y AL+N + A L D + +KG A +S+ Y+ ++ Y K E + MK
Sbjct: 690 YNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMK 749
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G+ D + Y + C G+TEK +F L V++ + + F+ + + K+G++
Sbjct: 750 LVGVPPDSFVYCALIDGCCKAGNTEKALSLF-LGMVEEGI-ASTPAFNALIDGFFKLGKL 807
Query: 299 EKAEESLR-RVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGY 355
+A + + V++ IT + V Y L+ + +VG +E +++ R+V P V L Y
Sbjct: 808 IEAYQLVEDMVDNHIT-PNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNV--LTY 864
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++ RIG M +F+E ++ D ++M+ ++KEGN+ KA + ++
Sbjct: 865 TSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLS 924
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCL 445
EG + L + + + E L L
Sbjct: 925 EGVNVCKNLYTILIDALCKHNNLSEVLKVL 954
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 126/298 (42%), Gaps = 14/298 (4%)
Query: 154 AKVHG------VASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
A +HG + +AE F+ + D+ + + L++ Y + A M D+
Sbjct: 552 AFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQ 611
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G ++V++ K + E + SE+ +KG+ DV++Y +S+ +G +
Sbjct: 612 GVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD---L 668
Query: 266 EGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+ FEL K +NPN T++ + K+G++ KA E + + R+ V Y +
Sbjct: 669 KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTI 728
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
++ Y E +++++ + V + Y A+I + G+ E +F +
Sbjct: 729 IAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ P N ++ + K G +A +++ PN ++ L E H I EA
Sbjct: 789 ASTPAF-NALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEA 845
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 122/284 (42%), Gaps = 15/284 (5%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
L + D Y L+NAY R + ++ M +KG + + Y+V++ + + D
Sbjct: 225 LGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVD 284
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
E + M KG+ D Y Y + C + STE + E+ + + P+ ++
Sbjct: 285 EALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTM--GLKPDHVAYTA 342
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL---LSLYGSVGKKEEVYRVWNLYR 344
+ ++K + A + + +R + Y+ L L G + K E+++ +
Sbjct: 343 LINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMM- 401
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS---SYDPRIANLMMSWYVKEG 401
+ P + Y+ +I + ++ MEK +E + +K + + + +++ G
Sbjct: 402 GIKPDIQT--YNCLIEGYYK---VQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCG 456
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ +A F +I G KPN + T+ +G ++E R EA+ L
Sbjct: 457 DLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKIL 500
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 130/327 (39%), Gaps = 37/327 (11%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y ++ V+ A ++ M+D+G + YN ++ + K + +E +S + EM
Sbjct: 479 IYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEM 538
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG++ +VY+Y ++ G + E F M +D + PN + + Y K G
Sbjct: 539 IAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEM-LDSGIAPNDVICTDLIDGYCKDGN 597
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGV----- 350
KA R + + D + L+ GK +E V++ L + + P V
Sbjct: 598 TTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTS 657
Query: 351 --TNL--------------------------GYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+NL Y+A+I+ L ++G+I ++F+
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ + + +++ Y K N +A F+ + G P+S + L +G + +AL
Sbjct: 718 LARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKAL 777
Query: 443 SCLKGAFAAEGAKSWRPKPVNVINFFK 469
S G EG S + FFK
Sbjct: 778 SLFLG-MVEEGIASTPAFNALIDGFFK 803
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 111/273 (40%), Gaps = 36/273 (13%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D +Y L++ + R + + ++D+M G + Y ++ ++K +
Sbjct: 299 LPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQ 358
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM + I+L+ ++Y + G EK E +F M + + P+ T++ + Y
Sbjct: 359 VKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTM-MGIKPDIQTYNCLIEGY 417
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K+ +EKA E L + KKE + N Y
Sbjct: 418 YKVQNMEKAYELLIEI-----------------------KKENL--TANAYMC------- 445
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
A+++ L GD+ ++F+E +S + I ++ VKEG F++A
Sbjct: 446 ---GAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGV 502
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ ++G P+ + T+ G + ++ E S L
Sbjct: 503 MKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYL 535
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 111/265 (41%), Gaps = 7/265 (2%)
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
GA++N A L +M G + + Y ++ +K ++E ++ MK+
Sbjct: 446 GAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKD 505
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+G+ DV+ YN + G E+ + M + K + PN T+ Y + G+++
Sbjct: 506 QGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEM-IAKGLKPNVYTYGAFIHGYCRAGEMQ 564
Query: 300 KAEES-LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
AE S + ++S I D + L+ Y G + + + L + V P V +
Sbjct: 565 AAERSFIEMLDSGIAPNDVICTD-LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQT--HS 621
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I L++ G ++ +F E L D ++S KEG+ A + + ++
Sbjct: 622 VLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK 681
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
G PN ++ L G + I +A
Sbjct: 682 GINPNIVTYNALINGLCKLGEIAKA 706
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 10/249 (4%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-C 256
L D M KG + + YN ++ K+ E + + + EKG+ + +Y+ ++ C
Sbjct: 674 LHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYC 733
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA-EESLRRVESRITGR 315
S TE + +F MK+ V P+ + + K G EKA L VE I
Sbjct: 734 KSANLTEAFQ-LFHGMKL-VGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAST 791
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
++ L+ + +GK E Y++ ++ Y +I +G+I+ E++F
Sbjct: 792 P--AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLF 849
Query: 376 EEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
E K + P + ++ Y + G + + F+ ++ G KP+ +W + + H+
Sbjct: 850 MEM--QKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHL 907
Query: 434 RERRILEAL 442
+E ++AL
Sbjct: 908 KEGNWIKAL 916
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 111/280 (39%), Gaps = 10/280 (3%)
Query: 150 LDLIAKVHGVASAEDFFLSL-PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
+D K A FL + + + + AL++ + + A L++ M D
Sbjct: 764 IDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHIT 823
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ + Y +++ + + E E + EM+++ + +V +Y L G +M +
Sbjct: 824 PNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSL 883
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
F+ M V + + P+ +S M ++K G KA + + + S + Y L+
Sbjct: 884 FDEM-VARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALC 942
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
EV +V + ++ ++ R G + ++ E V+S +
Sbjct: 943 KHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM--VRSFLN-- 998
Query: 389 IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
++ + V+ GN K+ SII EG K S +TL
Sbjct: 999 ----LLEFSVRNGNRGKSNGEMLSIILEGRKSLSGDIQTL 1034
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 7/247 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG L+N V+ + L+ + ++G+ + Y+ +++ K ++ +E + +M
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 374
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG + ++ Y+ + +G ++ + + M V+K PN T+S++ + K G
Sbjct: 375 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM-VNKGCTPNAFTYSSLIKGFFKTGNS 433
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
+KA + + + + Y L+ GK E +W L R + P V + Y
Sbjct: 434 QKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDV--VAYS 491
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
+MI L G +E K+F E L +S P + N+++ K+ + A NS++
Sbjct: 492 SMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSML 551
Query: 415 EEGGKPN 421
+ G P+
Sbjct: 552 DRGCNPD 558
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 139/327 (42%), Gaps = 11/327 (3%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDL--IAKVHGVASAEDFF--LSLPDTLKDRR 177
+ ALE Y+ G + +S + + L + + K+ V A + F +++ D
Sbjct: 151 FHRALEFYEC--GVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVF 208
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++ + A LL+D+M+ +G S+ +NV++ K + V +V M
Sbjct: 209 TYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM 268
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG + +YN ++ +G +K + + M K V PN T+ T+ +K G+
Sbjct: 269 FLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCV-PNDVTYGTLINGLVKQGR 327
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
L +E R + Y L+S K EE +W + + P + + Y
Sbjct: 328 SVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNI--VVY 385
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
A+I L R G ++ ++I E ++ + + + ++ + K GN KA + + +
Sbjct: 386 SALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK 445
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
PN + L G + ++ EA+
Sbjct: 446 NNCVPNEICYSVLIHGLCEDGKLREAM 472
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 143/362 (39%), Gaps = 36/362 (9%)
Query: 161 SAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK---MRDKGYAVHSLPYNVM 217
S + F SL + + +G L + RM+ + I+K + + Y LP
Sbjct: 62 SGDSTFYSLIENYANSGDFGTLFQVF--DRMKRERRVFIEKNFILVFRAYGKAHLPE--- 116
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
K + MV E + R V S+N L+ +G + +E K
Sbjct: 117 -------KAIELFGRMVDEFQ---CRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKT 166
Query: 278 -VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
++PN +F+ + K+G V++A E R + + D Y L+ + +E
Sbjct: 167 NISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 226
Query: 337 YRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
+ + + FP +++ ++ +I+ L + GD+ + K+ + + N ++
Sbjct: 227 VLLLDEMQIEGCFP--SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 284
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL-----KGAF 449
+ +G DKA + + ++ PN ++ TL G +++ R ++ + L +G
Sbjct: 285 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 344
Query: 450 AAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPG---YRKEKDYMSLIGLTD 506
A E A S + FK + E MG + V QP Y D + G D
Sbjct: 345 ANEYAYSTL-----ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD 399
Query: 507 EA 508
EA
Sbjct: 400 EA 401
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 120/266 (45%), Gaps = 7/266 (2%)
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
G+LLN + + A L+D M G+ + + YN ++ K ++ + + M++
Sbjct: 678 GSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK 737
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
KGIR D +YN +S + G + M V + ++PN F+ + ++K G +
Sbjct: 738 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDM-VKRKIDPNVIFFTALIDTFVKEGNLL 796
Query: 300 KAEESLRRVESRITGRDRVPYHYLLS---LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+A + + R + Y+ L++ ++G +G + ++ + + + FP V Y+
Sbjct: 797 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM-VSKGCFPDVVT--YN 853
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I+ + +E K+F E D N ++ Y + G + A+ FN +++
Sbjct: 854 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 913
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G P+ ++ L + +I +AL
Sbjct: 914 GVSPDIVTYNILLDCLCNNGKIEKAL 939
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 123/267 (46%), Gaps = 7/267 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+G+LL+ + G+A L+ M GY + + YN ++ K E + +++EM+
Sbjct: 144 FGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME 203
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+KG+ DV +YN L+ C S ++ + ++MK +++NP+ TF+ + +++K G
Sbjct: 204 KKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK--RSINPDVVTFTALIDVFVKQGN 261
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGY 355
+++A+E + + + V Y+ +++ G+ + + ++L S FP V Y
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT--Y 319
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +IS + ++ K+F+ + D N ++ Y + G A F ++
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
P+ + L G I AL
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESAL 406
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 122/298 (40%), Gaps = 52/298 (17%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAED------- 164
V+ L K R +ALEV+ M +G R +DA LI+ + D
Sbjct: 715 VINGLCKNRDLNNALEVFYCMEKKGIR-----ADAVTYNTLISGLSNSGRWTDAARLLRD 769
Query: 165 -----------FFLSLPDT-------LKDRRVY---------------GALLNAYVRARM 191
FF +L DT L+ R +Y +L+N +
Sbjct: 770 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 829
Query: 192 RGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
G+A+ + D M KG + YN ++T + K K ++ + EM +G+ D ++YN
Sbjct: 830 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 889
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ G + VF M VD V+P+ T++ + G++EKA + ++
Sbjct: 890 LIHGYCQAGKLNVAQKVFNRM-VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS 948
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-PGVT--NLGYHAMISSLARIG 366
D + Y+ ++ + + +++ W L+RS+ GV + Y MIS L R G
Sbjct: 949 EMDVDIITYNIIIQ---GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 114/263 (43%), Gaps = 5/263 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ + +A L+ M + + + + ++ ++K E ++
Sbjct: 743 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 802
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM + + +V++YN ++ G + +F+LM V K P+ T++T+ T + K
Sbjct: 803 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM-VSKGCFPDVVTYNTLITGFCK 861
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN-- 352
+VE + + + D Y+ L+ Y GK +V+N R V GV+
Sbjct: 862 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN--RMVDCGVSPDI 919
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y+ ++ L G IE + E+ + D N+++ + +A F S
Sbjct: 920 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 979
Query: 413 IIEEGGKPNSTSWETLAEGHIRE 435
+ +G KP++ ++ T+ G R+
Sbjct: 980 LTRKGVKPDAIAYITMISGLCRK 1002
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 106/259 (40%), Gaps = 5/259 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y LL + +A ++ M + + + ++ +++K DE + +
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM + + + +YN ++ G + F+LM K PN T++T+ + + K
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM-ASKGCFPNVVTYNTLISGFCK 328
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV--WNLYRSVFPGVTN 352
V++ + +R+ D Y+ L+ Y VGK + W + R V P +
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI-- 386
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ + ++ L G+IE F++ + N+M+ K +KA F
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCR 446
Query: 413 IIEEGGKPNSTSWETLAEG 431
+ EG KP++ ++ + G
Sbjct: 447 LPVEGVKPDARTYTIMILG 465
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/264 (18%), Positives = 109/264 (41%), Gaps = 17/264 (6%)
Query: 209 VHSLP------YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGS 261
VHS P + ++T ++ Y+ V +M+ GI D+YS+ I + C
Sbjct: 63 VHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRL 122
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
+ + + ++MK+ P+ TF ++ + + ++ A + + + V Y+
Sbjct: 123 SFALSVLGKMMKL--GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYN 180
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
L+ G+ + N G + Y+ +++ L G ++ + +
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM-- 238
Query: 382 KSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
K S +P + ++ +VK+GN D+A+ + +I+ PN+ ++ ++ G R+
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 440 EALSCLKGAFAAEGAKSWRPKPVN 463
+A K F +K P V
Sbjct: 299 DA----KKTFDLMASKGCFPNVVT 318
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ Y +A A+ + ++M D G + + YN+++ + ++ MV
Sbjct: 883 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 942
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQG--STEKMEGVFELMK--VDKAVNPNWTTFSTMAT 290
++++ + +D+ +YNI + QG T+K++ + L + K V P+ + TM +
Sbjct: 943 EDLQKSEMDVDIITYNIII-----QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 997
Query: 291 MYIKMGQVEKAEESLRRVE 309
+ G +A++ RR++
Sbjct: 998 GLCRKGLQREADKLCRRMK 1016
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 170/415 (40%), Gaps = 50/415 (12%)
Query: 63 VDFERRP-MIKWNAIFRKLSLMDNPQLGSASVLND-WEKGGRSLTKWELCRVVKELRKFR 120
V+ +P +I NA+ L L N ++ A +L D + G + V+K + K
Sbjct: 169 VEMGHKPTLITLNALVNGLCL--NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRV 178
+ A+E+ M R + +L A +I +D + K + +A + F + + D +
Sbjct: 227 QTALAMELLRKMEER--KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 179 YGALLNAYVRA-RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ + A R A+LL D ++ K + ++ ++ ++K + E E + EM
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRK-ITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++GI D +Y + + +K + +LM V K PN TF+ + Y K
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM-VSKGCGPNIRTFNILINGYCKANL 402
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
++ E R++ R D V Y+ L+ + +GK E ++ + R V P + + Y
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS--Y 460
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL----------------------- 392
++ L G+ E +IFE+ K D I N+
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 393 ------------MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
M+ K+G+ +A+ F + E+G PN ++ L H+ E
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 106/260 (40%), Gaps = 1/260 (0%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
++N R R A + K+ GY ++ ++ ++ E +V M E G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ + + N ++ G + + M V+ PN T+ + + K GQ A
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
E LR++E R D V Y ++ G + + ++N + Y +I
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
G + K+ + + K + D + ++ +VKEG +AE +I+ G P+
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 422 STSWETLAEGHIRERRILEA 441
+ ++ +L +G +E ++ +A
Sbjct: 352 TVTYTSLIDGFCKENQLDKA 371
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 105/262 (40%), Gaps = 36/262 (13%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
AL+N +A LLID+M + G+ + + Y ++ + K + ++ +M+E+
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
I+LD Y+I + GS + +F M++ K + ++T+ + G+ +
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI-KGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
+ LR + + R + P V + + A+I
Sbjct: 301 GAKLLRDM---------------------------------IKRKITPDV--VAFSALID 325
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
+ G + E++ +E + S D ++ + KE DKA + ++ +G P
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 421 NSTSWETLAEGHIRERRILEAL 442
N ++ L G+ + I + L
Sbjct: 386 NIRTFNILINGYCKANLIDDGL 407
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 95/224 (42%), Gaps = 9/224 (4%)
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
+ ++ + ++ + K+YD V + +M+ KGI ++Y+ +I ++ C K+ F
Sbjct: 73 IDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC---CRCRKLSLAFSA 129
Query: 272 MK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
M + P+ TFST+ G+V +A E + R+ + + L++
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 330 VGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
GK + V + R V G + Y ++ + + G ++ + K D
Sbjct: 190 NGKVSDA--VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDA 247
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
++++ K+G+ D A FN + +G K + + TL G
Sbjct: 248 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 156 VHGVASAE------DFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+HG+ +A D F SLP D + Y ++ + A+LL KM + G+
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
+ + YN+++ ++ + + ++ E+K G +D + LS+
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALST 606
>gi|168045822|ref|XP_001775375.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673320|gb|EDQ59845.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 25/280 (8%)
Query: 175 DRRVYGALLNAYVRARMR----GNAELLIDKMRDKGYAVHSL-PYNVMMTLYMKIKEYDE 229
D +Y AL+ A+++A + A L ++M+ K L YN+++ ++++ +
Sbjct: 74 DTSLYNALITAHLQAEDKRIGFAKALQLFEEMKTKANCKPDLVTYNILLRGSAQVRDILQ 133
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
VE EM+ + I ++ SYN + + G G +ME M++ K + P+ T +T+
Sbjct: 134 VERFFEEMEVEKIHPNLISYNGVIGAYGKAGDLVQMEKTLFTMRILKHIKPDTVTSNTLI 193
Query: 290 TMY------IKMGQVEKAEESLRRVESRITGR-DRVPYHYLLSLY---GSVGKKEEVYRV 339
Y +KM QV K S+ +++ T R D Y+ L++ Y G VGK E
Sbjct: 194 ESYGYGRDFVKMEQVFK---SMTAAKNKQTSRPDAKTYNILMASYARLGEVGKME----- 245
Query: 340 WNLYRSVFPGVT-NL-GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
W+ R NL Y +++ +G I M + F + L N M+ Y
Sbjct: 246 WSCSRMEAANFKLNLRSYEILMTGYGEVGAIASMSECFYQMLQAGMQPQKSTLNAMLRAY 305
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
K F++AE N + +P ++S+ L + +ERR
Sbjct: 306 CKHNCFEEAEELLNDALGWQTRPRTSSYLILLRAYAKERR 345
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 117/264 (44%), Gaps = 1/264 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YGAL+ + R NA + ++MRD G +++ + ++ + K + +
Sbjct: 254 DVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLY 313
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M+ +G+ D+ +YN ++ + + E + E MK + + P+ T++T+ K
Sbjct: 314 QDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMK-NAGLKPDKVTYTTLIDGCCK 372
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+++ A + +++ + D V Y L+S G+ + RV N
Sbjct: 373 DGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTT 432
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +I + R GD++ K+ +E + N++M+ K G A+ ++++
Sbjct: 433 YTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAML 492
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
G P+ ++ L +G + ++
Sbjct: 493 NIGVSPDDITYNILLDGQCKHGKV 516
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 131/312 (41%), Gaps = 22/312 (7%)
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
A + L++++ A F+L L D + R++ L+ +VR +A + D+MR
Sbjct: 154 APVCSGLMSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR 213
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
+ + +N +++ + ++ D V+ + EM + G++ DVY+Y + G E
Sbjct: 214 -RSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRME 272
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+F M+ D VNPN F+T+ + K G V + + + R D V Y+ L
Sbjct: 273 NAVKMFNEMR-DTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNAL 331
Query: 324 LSLYGSVGKKEEVYRVWNL--YRSVFPGVTNLG-------YHAMISSLARIGDIEGMEKI 374
++ + R NL S+ + N G Y +I + G ++ I
Sbjct: 332 VN---------GLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDI 382
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
++ + S D ++S K G AE ++E +P++T++ + + R
Sbjct: 383 KQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCR 442
Query: 435 ERRILEALSCLK 446
+ + LK
Sbjct: 443 KGDVKTGFKLLK 454
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 134/319 (42%), Gaps = 43/319 (13%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSL 169
++K + R ++A+++++ M + G +A +D K V + D + + +
Sbjct: 261 LIKGFCRTGRMENAVKMFNEMRDTG--VNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRV 318
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ D Y AL+N RAR AE ++++M++ G + Y ++ K + D
Sbjct: 319 RGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDM 378
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ +M EK + LD +Y +S G E V M ++ A+ P+ TT++ +
Sbjct: 379 AMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREM-MEAALEPDNTTYTMVI 437
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+ + G V+ + L+ ++++ GKK PG
Sbjct: 438 DAFCRKGDVKTGFKLLKEMQNK-------------------GKK--------------PG 464
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
V Y+ +++ L ++G ++ + + L++ S D N+++ K G +E
Sbjct: 465 VVT--YNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL 522
Query: 410 FNSIIEEGGKPNSTSWETL 428
+S +G P+ + +L
Sbjct: 523 ESS---KGMVPDFAVYTSL 538
>gi|356510655|ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 712
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 11/283 (3%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D Y A+L+ Y R L ++ R G+ + ++V+ ++ + +YD +
Sbjct: 256 MPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRY 315
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM+ G++ ++ YN L + G G G+FE M ++ + PN T + + +Y
Sbjct: 316 VFQEMESVGVQPNLVVYNTLLEAMGKAGKPGFARGLFEEM-IESGIVPNEKTLTAVIKIY 374
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFPGVT 351
K A E +R++ D + Y+ LL++ VG EE ++ ++ +SV
Sbjct: 375 GKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPD 434
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y AM++ GD++ K+F+E + + ++ + FD F+
Sbjct: 435 SWSYTAMLNIYGSQGDVDKAMKLFDEMCKLGVELNVMGFTCLIQCLGRAMEFDDLVRVFD 494
Query: 412 SIIEEGGKPNS------TSWETLAEGHIRERRILEALSCLKGA 448
+E G KP+ S +L++G E ++ L+CL+ A
Sbjct: 495 ISVERGIKPDDRLCGCLLSVVSLSQGSNDEEKV---LACLQQA 534
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 54/288 (18%), Positives = 107/288 (37%), Gaps = 37/288 (12%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y + + + G E L +M D G + ++ Y+ +++ K YD+ M
Sbjct: 192 YNVTMKSLRFGKQFGLIEDLAHQMIDNGVPLDNITYSTIISCAKKCNLYDKAVHWFERMY 251
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G+ D +Y+ L G E++ ++E + P+ TFS + M+ + G
Sbjct: 252 KTGLMPDEVTYSAILDVYARLGKVEEVISLYERGRA-TGWKPDPITFSVLGKMFGEAGDY 310
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK-------------------------- 332
+ + +ES + V Y+ LL G GK
Sbjct: 311 DGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTAV 370
Query: 333 ---------KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW-LSVK 382
+ +W + + + Y+ +++ A +G +E E +F + SV
Sbjct: 371 IKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVH 430
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
D M++ Y +G+ DKA F+ + + G + N + L +
Sbjct: 431 CKPDSWSYTAMLNIYGSQGDVDKAMKLFDEMCKLGVELNVMGFTCLIQ 478
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 125/273 (45%), Gaps = 5/273 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+NA +A A L+D MR +G + YN +++ +++ D+ +
Sbjct: 368 DVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF 427
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M+ G+ Y+Y +++ G G ++K FE MK+ + + PN + +
Sbjct: 428 NNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKI-RGIAPNIVACNASLYSLAE 486
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
MG++ +A+ R++S D V Y+ ++ Y G+ +E + + P +
Sbjct: 487 MGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIV 546
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ +++I++L + G ++ K+F +K + N +++ KEG +A F S
Sbjct: 547 I--NSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFAS 604
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ G PN+ ++ T+ + + + AL L
Sbjct: 605 MTGNGCPPNTITFNTILDCLCKNDEVDLALKML 637
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 123/257 (47%), Gaps = 2/257 (0%)
Query: 186 YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD 245
++R +R KMR+ G+ +++ YN ++ L ++ E M M +G++
Sbjct: 170 FIRGGLR-QTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPS 228
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
+ +++ + + G + TE ++ + E M+ + PN T++ + + G++++A +
Sbjct: 229 LKTFSALMVATGKRRDTETVKSLLEEME-SLGLKPNIYTYTICIRVLGRAGRIDEACRIM 287
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARI 365
+R+E G D V Y L+ + GK ++ ++ ++ + Y M+ +
Sbjct: 288 KRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDC 347
Query: 366 GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
GD+ +++ + E + + D ++++ K GN D+A + + ++G PN ++
Sbjct: 348 GDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTY 407
Query: 426 ETLAEGHIRERRILEAL 442
TL G +R R+ +AL
Sbjct: 408 NTLISGLLRVNRLDDAL 424
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 113/271 (41%), Gaps = 1/271 (0%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L + Y L++ +R +A L + M G + Y + + Y K D+
Sbjct: 400 VLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKAL 459
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+MK +GI ++ + N L S G + + +F +K + P+ T++ M
Sbjct: 460 ETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLK-SNGLAPDSVTYNMMMKC 518
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
Y K GQV++A E L + D + + L++ G+ +E ++++ + + T
Sbjct: 519 YSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPT 578
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y+ +I+ L + G ++ ++F + N ++ K D A
Sbjct: 579 VVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLY 638
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ P+ ++ T+ G + E+R+ +A+
Sbjct: 639 KMTTMNCMPDVLTFNTIIHGLVIEKRVSDAI 669
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 96/215 (44%), Gaps = 1/215 (0%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
Y ++ +K +E + + EM + G R + YNI ++ G G +F+ M
Sbjct: 898 YGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRM- 956
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
V + + P+ +++++ + G+V+ A +++ D + Y+ ++ G +
Sbjct: 957 VREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRI 1016
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
EE +++ +S Y+++I +L G +E K++EE + + N +
Sbjct: 1017 EEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNAL 1076
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ Y GN D A A + ++ G PN+ ++ L
Sbjct: 1077 IRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 99/230 (43%), Gaps = 1/230 (0%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN ++ ++ + + ++ +EMK G DV++YN+ L + G G ++ ++E M
Sbjct: 793 YNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQM- 851
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ + PN T + + +K ++KA + + S Y LL G+
Sbjct: 852 ICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRL 911
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
EE ++ N Y+ +I+ + GD+ ++F+ + D + +
Sbjct: 912 EEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSL 971
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ + G D A +F + + G +S ++ + +G R RI EAL+
Sbjct: 972 VGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/308 (18%), Positives = 121/308 (39%), Gaps = 44/308 (14%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+ + AL+ A + R + L+++M G + Y + + + + DE ++
Sbjct: 230 KTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKR 289
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M++ G DV +Y + + + + G + +F MK P+ T+ TM + G
Sbjct: 290 MEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSH-KPDRVTYITMLDKFSDCG 348
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLG 354
+ + +E +E+ D + + L++ G +E + + ++ R V P +
Sbjct: 349 DLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHT-- 406
Query: 355 YHAMISSLARIGDIEGMEKIFE--EWLSVKSSYDPRIANLMMSWYVKEGNFDKA------ 406
Y+ +IS L R+ ++ +F E L V + I L + +Y K G DKA
Sbjct: 407 YNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYI--LFIDFYGKSGRSDKALETFEK 464
Query: 407 -----------------------------EAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
+ FN + G P+S ++ + + + + +
Sbjct: 465 MKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQ 524
Query: 438 ILEALSCL 445
+ EA+ L
Sbjct: 525 VDEAIELL 532
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 5/215 (2%)
Query: 96 DWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAK 155
D G S T ++ L K R + A E+++ M + G R + + I ++ K
Sbjct: 885 DLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYN--ILINGFGK 942
Query: 156 VHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
V +A + F + D + Y +L+ A +A +K++ G + S+
Sbjct: 943 TGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIA 1002
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN+M+ + +E ++ EM+ +GI D+++YN + + G G E+ ++E ++
Sbjct: 1003 YNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQ 1062
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
+ PN T++ + Y G + A +R+
Sbjct: 1063 F-IGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRM 1096
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 103/234 (44%), Gaps = 7/234 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L +M++ G A YN+++ + K + +E+ + +M + + ++NI +++
Sbjct: 812 LFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLV 871
Query: 258 SQGSTEK-MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
S +K ++ ++L+ D +P T+ + +K G++E+A+E + +
Sbjct: 872 KSNSLDKALDLFYDLVSGD--FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPN 929
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV-TNL-GYHAMISSLARIGDIEGMEKI 374
Y+ L++ +G G ++ R V G+ +L Y +++ L G ++
Sbjct: 930 NAIYNILINGFGKTGDVNTACELFK--RMVREGIRPDLKSYTSLVGCLCEAGRVDDALHY 987
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
FE+ D NLM+ + ++A ++ + G P+ ++ +L
Sbjct: 988 FEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 122/274 (44%), Gaps = 5/274 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
++ +Y ++N + + + + L KM+ G + YN ++T Y + + +
Sbjct: 176 NQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVF 235
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ ++G+ + +YNI + +G K EG+ E MK +NP TF+ +
Sbjct: 236 DEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMK-RAHINPTTRTFNMLMDGLCN 294
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
GQ++KA L +++ V Y+ L+S + VG V + R + P +
Sbjct: 295 TGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISP--SK 352
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y ++++ R DIE ++F + D +++ +GN +A + S
Sbjct: 353 VTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKS 412
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++E +PN + T+ G+ +E +AL L+
Sbjct: 413 MVEMHLQPNDVIYNTMINGYCKECNSYKALKFLE 446
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 125/280 (44%), Gaps = 1/280 (0%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ L L + Y +L+ Y R A + D++ +G A +++ YN+++ + +
Sbjct: 203 MKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQ 262
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+ E ++ MK I ++N+ + + G +K E +K+ + P T++
Sbjct: 263 VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKL-IGLCPTLVTYN 321
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
+ + + K+G E +R +E R +V Y L++ + E+ Y +++L + +
Sbjct: 322 ILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRI 381
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
Y +I L G++ K+++ + + + I N M++ Y KE N KA
Sbjct: 382 GLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKA 441
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
F +++ G PN S+ + + ++ + +EA LK
Sbjct: 442 LKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLK 481
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 120/296 (40%), Gaps = 8/296 (2%)
Query: 150 LDLIAKVHGVASAEDFFLS-LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
LDL+AK + FF L T D + + A+ L+ +M G +
Sbjct: 80 LDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVS 139
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ Y +++ + + D+ + M S M + G+ + Y Y I ++ +G + +
Sbjct: 140 PNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFEL 199
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
++ MK+ V PN T++++ T Y + G++ A + + R + V Y+ L+ G
Sbjct: 200 YQKMKL-VGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILI---G 255
Query: 329 SVGKKEEVYRVWNLY---RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+ +K +V + L + T ++ ++ L G ++ E+ +
Sbjct: 256 GLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCP 315
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N+++S + K GN + + G P+ ++ L +R I +A
Sbjct: 316 TLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKA 371
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 7/247 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG L+N V+ + L+ + ++G+ + Y+ +++ K ++ +E + +M
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 390
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG + ++ Y+ + +G ++ + + M V+K PN T+S++ + K G
Sbjct: 391 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM-VNKGCTPNAFTYSSLIKGFFKTGNS 449
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
+KA + + + + Y L+ GK E +W L R + P V + Y
Sbjct: 450 QKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDV--VAYS 507
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
+MI L G +E K+F E L +S P + N+++ K+ + A NS++
Sbjct: 508 SMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSML 567
Query: 415 EEGGKPN 421
+ G P+
Sbjct: 568 DRGCNPD 574
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 139/327 (42%), Gaps = 11/327 (3%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDL--IAKVHGVASAEDFF--LSLPDTLKDRR 177
+ ALE Y+ G + +S + + L + + K+ V A + F +++ D
Sbjct: 167 FHRALEFYEC--GVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVF 224
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++ + A LL+D+M+ +G S+ +NV++ K + V +V M
Sbjct: 225 TYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM 284
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG + +YN ++ +G +K + + M K V PN T+ T+ +K G+
Sbjct: 285 FLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCV-PNDVTYGTLINGLVKQGR 343
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
L +E R + Y L+S K EE +W + + P + + Y
Sbjct: 344 SVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNI--VVY 401
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
A+I L R G ++ ++I E ++ + + + ++ + K GN KA + + +
Sbjct: 402 SALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK 461
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
PN + L G + ++ EA+
Sbjct: 462 NNCVPNEICYSVLIHGLCEDGKLREAM 488
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 119/291 (40%), Gaps = 23/291 (7%)
Query: 161 SAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK---MRDKGYAVHSLPYNVM 217
S + F SL + + +G L + RM+ + I+K + + Y LP
Sbjct: 78 SGDSTFYSLIENYANSGDFGTLFQVF--DRMKRERRVFIEKNFILVFRAYGKAHLPE--- 132
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
K + MV E + R V S+N L+ +G + +E K
Sbjct: 133 -------KAIELFGRMVDEFQ---CRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKT 182
Query: 278 -VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
++PN +F+ + K+G V++A E R + + D Y L+ + +E
Sbjct: 183 NISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 242
Query: 337 YRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
+ + + FP +++ ++ +I+ L + GD+ + K+ + + N ++
Sbjct: 243 VLLLDEMQIEGCFP--SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 300
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ +G DKA + + ++ PN ++ TL G +++ R ++ + L
Sbjct: 301 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLL 351
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 39/291 (13%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L++ Y NA ++D M D G YN ++ K +Y++V
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETY 519
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M EKG +++++NI L S +K G+ E MK +K+VNP+ TF T+ + K
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMK-NKSVNPDAVTFGTLIDGFCK 578
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G ++ A R K EEVY V S N+
Sbjct: 579 NGDLDGAYTLFR-------------------------KMEEVYMV-----SCSTPTYNII 608
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
HA L ++ EK+F+E + D LM+ + K GN D F ++
Sbjct: 609 IHAFTEKL----NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMM 664
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVI 465
E G P+ T+ + E R+ EA G K P+ VN I
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEA----AGIIHRMVQKGLVPEAVNTI 711
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 117/263 (44%), Gaps = 9/263 (3%)
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
+ ++ R A L++ M +G ++ + Y ++ + + DE + +M G+
Sbjct: 153 MKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGV 212
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
L + ++N L +G ++ E + + + + + V PN T++ + G+++ A
Sbjct: 213 SLCLSTFNKLLHVLCKKGDVKECEKLLDKV-IKRGVLPNLFTYNFFIQGLCQKGELDAAV 271
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYG----SVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+ R+ + D V Y+YL+ YG S ++ EVY + + P + Y+ +
Sbjct: 272 RMVGRLIDQGPKPDVVTYNYLI--YGLCKNSKFQEAEVYLGKLVNEGLEP--DSFTYNTL 327
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I+ + G ++ E+I + D ++ EG ++A A FN + +G
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 419 KPNSTSWETLAEGHIRERRILEA 441
KPN + TL +G + ILEA
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEA 410
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 96/226 (42%), Gaps = 11/226 (4%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELM 272
YN +M++ + +D+ + M+++GI DVYS+ I + S C T + L+
Sbjct: 114 YNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFC----RTSRPHAALRLL 169
Query: 273 K--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
+ N + T+ + + ++ E ++ + ++ LL +
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKK 229
Query: 331 GKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
G +E ++ + + R V P + Y+ I L + G+++ ++ + D
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNL--FTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVV 287
Query: 389 IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
N ++ K F +AE + ++ EG +P+S ++ TL G+ +
Sbjct: 288 TYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCK 333
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 107/262 (40%), Gaps = 5/262 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ Y + M AE ++ G+ Y ++ E + ++
Sbjct: 320 DSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALF 379
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+E KGI+ +V YN + +QG + + M +K + P TF+ + K
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMS-EKGLIPEVQTFNILVNGLCK 438
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
MG V A+ ++ + S+ D ++ L+ Y + K E + ++ V P V
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYT 498
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+++++ L + E + + ++ + + + N+++ + DKA
Sbjct: 499 --YNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEE 556
Query: 413 IIEEGGKPNSTSWETLAEGHIR 434
+ + P++ ++ TL +G +
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCK 578
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 104/248 (41%), Gaps = 5/248 (2%)
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
E+L+D ++ G + Y M Y + + E ++ M V+SYN +S
Sbjct: 61 EVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSI 120
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
G ++ V+ M+ D+ + P+ +F+ + + + A L + S+
Sbjct: 121 LVDSGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEM 179
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
+ V Y ++ + K+E Y ++ + + ++ ++ L + GD++ EK+
Sbjct: 180 NVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLL 239
Query: 376 EEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
++ +K P + N + ++G D A +I++G KP+ ++ L G
Sbjct: 240 DKV--IKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLC 297
Query: 434 RERRILEA 441
+ + EA
Sbjct: 298 KNSKFQEA 305
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 122/257 (47%), Gaps = 7/257 (2%)
Query: 178 VYGALLNA-YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y L++A ++ RM G A+ +I +MR KG ++ YN+++ Y + + +E
Sbjct: 315 TYNLLVHALFMEGRM-GEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNE 373
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M KGI +Y + + ++ + +FE + +D+ V+P+ F+ M + G
Sbjct: 374 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI-LDQGVSPDVIMFNAMIDGHCANG 432
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
VE+A L+ ++ + D V ++ L+ GK EE + + + ++ Y+
Sbjct: 433 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYN 492
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
+IS R GDI+ + +E LS+ ++P + N ++ K D AE ++
Sbjct: 493 TLISGYGRRGDIKDAFXVRDEMLSI--GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 550
Query: 415 EEGGKPNSTSWETLAEG 431
+G P+ +++ +L EG
Sbjct: 551 NKGISPDDSTYLSLIEG 567
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 126/266 (47%), Gaps = 7/266 (2%)
Query: 179 YGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ Y R + G A ++D MR KG S Y +++ K +E + +M
Sbjct: 211 YNTIIHGYSSRGNIEG-ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM 269
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G+ + +YN + ++G E+ + M V K + P+ +T++ + G+
Sbjct: 270 VEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM-VKKGIMPSVSTYNLLVHALFMEGR 328
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+ +A++ ++ + + D + Y+ L++ Y G + + + N L + + P T++ Y
Sbjct: 329 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEP--THVTY 386
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
++I L+R ++ + +FE+ L S D + N M+ + GN ++A +
Sbjct: 387 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDR 446
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
+ P+ ++ TL +G RE ++ EA
Sbjct: 447 KSVPPDEVTFNTLMQGRCREGKVEEA 472
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG+L++ + A L DKM + G +++ YN ++ Y + + S
Sbjct: 242 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 301
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM +KGI V +YN+ + + +G + + + + M+ K + P+ T++ + Y +
Sbjct: 302 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGYSR 360
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G ++A + + S+ V Y L+ + + +E ++ L + V P V
Sbjct: 361 CGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV-- 418
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ ++AMI G++E + +E D N +M +EG ++A +
Sbjct: 419 IMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 478
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ G KP+ S+ TL G+ R I +A
Sbjct: 479 MKXRGIKPDHISYNTLISGYGRRGDIKDAF 508
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLID---KMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ D Y L+N Y R GNA+ D +M KG + Y ++ + + E
Sbjct: 345 IPDAITYNILINGYSRC---GNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 401
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-VD-KAVNPNWTTFST 287
+ + ++ ++G+ DV +N + + G+ E+ F L+K +D K+V P+ TF+T
Sbjct: 402 ADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVER---AFMLLKEMDRKSVPPDEVTFNT 458
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+ + G+VE+A L ++ R D + Y+ L+S YG G ++ + V + S+
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG 518
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
T L Y+A+I L + + + E++ +E ++ S D
Sbjct: 519 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 557
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Query: 162 AEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAE---LLIDKMRDKGYAVHSLPYNV 216
A+D F + D D ++ A+++ + GN E +L+ +M K + +N
Sbjct: 402 ADDLFEKILDQGVSPDVIMFNAMIDGHC---ANGNVERAFMLLKEMDRKSVPPDEVTFNT 458
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
+M + + +E ++ EMK +GI+ D SYN +S G +G + V + M +
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEM-LSI 517
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
NP T++ + K + + AEE L+ + ++ D Y L+ G+V
Sbjct: 518 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 571
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 128/267 (47%), Gaps = 10/267 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y AL+N Y + M +A +++ M + ++ YN ++ Y K + + ++++M
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKML 454
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E+ + DV +YN + G+ + + LM D+ + P+ T+++M K +V
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN-DRGLVPDPWTYTSMIDSLCKSKRV 513
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
E+A + +E + + V Y L+ Y GK E + + L ++ P +L ++
Sbjct: 514 EEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLP--NSLTFN 571
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LMMSWYVKEGNFDKAEAFFNSII 414
A+I L G ++ E E VK P ++ +++ +K+G+FD A F ++
Sbjct: 572 ALIHGLCTDGKLK--EATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQML 629
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
G KP++ ++ T + + RE R+ +A
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLQDA 656
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 12/273 (4%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
++ Y L++ R A L KM+D Y V++ + E ++
Sbjct: 286 RNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNL 345
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
V EM+EKGI+ ++++Y + + S SQ EK + M ++K + PN T++ + Y
Sbjct: 346 VKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQM-LEKGLMPNVITYNALINGYC 404
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR---VWN--LYRSVFP 348
K G +E A + + +ESR + Y+ L+ Y K V++ V N L R V P
Sbjct: 405 KRGMIEDALDVVELMESRNLRPNTRTYNELIKGYC----KRNVHKAMGVLNKMLERKVLP 460
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
V Y+++I R G+ + ++ DP M+ K ++A
Sbjct: 461 DVVT--YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACD 518
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F+S+ ++ PN + L +G+ + ++ EA
Sbjct: 519 LFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEA 551
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 126/296 (42%), Gaps = 14/296 (4%)
Query: 156 VHGVA------SAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+HG+ A D F+ + D R Y L+ A + + A L+ +M +KG
Sbjct: 295 IHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGI 354
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ Y V++ + ++ ++ +M EKG+ +V +YN ++ +G E
Sbjct: 355 KPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALD 414
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
V ELM+ + + PN T++ + Y K V KA L ++ R D V Y+ L+
Sbjct: 415 VVELME-SRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 328 GSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G + YR+ +L R + P Y +MI SL + +E +F+
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDPWT--YTSMIDSLCKSKRVEEACDLFDSLEQKDVIP 530
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ + ++ Y K G ++A ++ + PNS ++ L G + ++ EA
Sbjct: 531 NVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA 586
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 116/272 (42%), Gaps = 2/272 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+ R Y L+ Y + R A +++KM ++ + YN ++ + +D ++
Sbjct: 427 NTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S M ++G+ D ++Y + S E+ +F+ ++ K V PN ++ + Y K
Sbjct: 486 SLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLE-QKDVIPNVVMYTALIDGYCK 544
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+V +A L ++ S+ + + ++ L+ + GK +E + + T
Sbjct: 545 AGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVST 604
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
+I L + GD + + F++ LS + D + Y +EG AE +
Sbjct: 605 DTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMK 664
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
E G P+ ++ +L +G+ R A LK
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLK 696
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%)
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +++SLAR G ++ M++++ E L K + N M++ Y K GN ++A + + I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
E G P+ ++ +L G+ + + + A K
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFK 277
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/263 (17%), Positives = 111/263 (42%), Gaps = 25/263 (9%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M G + Y + Y + + E MV++MKE G+ D+++Y+ + G G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLG 686
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM--GQVEKAEESL------------- 305
T V + M D P+ TF ++ ++M G+V+ E +
Sbjct: 687 RTNSAFVVLKRMH-DTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVV 745
Query: 306 ----RRVESRITGRDRVPYHYLLSL--YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
+ VE +T + +L + G++ E+V+ + P + L ++A++
Sbjct: 746 ELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISP--SELVFNALL 803
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
S ++ K+ ++ + V +++ K+G ++ + F ++++ G
Sbjct: 804 SCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYY 863
Query: 420 PNSTSWETLAEGHIRERRILEAL 442
+ +W+ + +G + ++ ++EA
Sbjct: 864 DDELAWKIIIDG-VGKQGLVEAF 885
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 102/237 (43%), Gaps = 17/237 (7%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN ++ + DE++ + EM E + ++Y+YN ++ G+ E+ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMI- 244
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
V+ ++P++ T++++ Y + ++ A + + + + R+ V Y +L+ +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRI 304
Query: 334 EEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK----SSYDP 387
+E ++ + +P V Y +I +L G E+ E VK P
Sbjct: 305 DEAMDLFVKMKDDDCYPTVRT--YTVLIKALC------GSERKSEALNLVKEMEEKGIKP 356
Query: 388 RIAN--LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
I +++ + +KA ++E+G PN ++ L G+ + I +AL
Sbjct: 357 NIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAL 413
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 140/369 (37%), Gaps = 67/369 (18%)
Query: 121 RYKHALEVYD-----WMNNR--GERFRL---------SASDAAIQLDLIAKVHGVASAED 164
RYKH++ Y +NN G F++ S +D LDL K++ S E
Sbjct: 118 RYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFE- 176
Query: 165 FFLSLPDTLKDRRV---YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY 221
LK + + Y LLN+ R + + + +M + + YN M+ Y
Sbjct: 177 --------LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGY 228
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYN---------------------IWLSSC--GS 258
K+ +E VS + E G+ D ++Y + L C
Sbjct: 229 CKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNE 288
Query: 259 QGSTEKMEGVFELMKVDKAV--------NPNWTTFSTMATMYIKMGQVEKAEESL---RR 307
T + G+ ++D+A+ + + T T + + E+ E+L +
Sbjct: 289 VAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKE 348
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARI 365
+E + + Y L+ S K E+ + L + + P V + Y+A+I+ +
Sbjct: 349 MEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNV--ITYNALINGYCKR 406
Query: 366 GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
G IE + E S + R N ++ Y K N KA N ++E P+ ++
Sbjct: 407 GMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTY 465
Query: 426 ETLAEGHIR 434
+L +G R
Sbjct: 466 NSLIDGQCR 474
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 167/376 (44%), Gaps = 22/376 (5%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
++ + A+ L P L + ++LN EKG V+ L K+R AL ++
Sbjct: 205 LVTYGAVINGLCKRGEPDL-ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV------YGALL 183
M+N+G R D LI+ + D L D L +R++ + +L+
Sbjct: 264 TEMDNKGIR-----PDVFTYSSLISCLCNYGRWSDASRLLSDML-ERKINPNVVTFNSLI 317
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR 243
+A+ + AE L D+M + + + YN ++ + DE + + + M K
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 244 LDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
DV +YN ++ C ++ + ME ++ + + + N T++T+ + + + A+
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSR--RGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVF-PGVTNLGYHAMIS 360
+++ S + + Y+ LL GK E+ V+ L +S P + Y+ M
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT--YNIMSE 493
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ + G +E +F LS+K IA N M+S + K+G ++A F + E+G
Sbjct: 494 GMCKAGKVEDGWDLFCS-LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 420 PNSTSWETLAEGHIRE 435
P+S ++ TL H+R+
Sbjct: 553 PDSGTYNTLIRAHLRD 568
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 130/274 (47%), Gaps = 13/274 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D YGA++N + RG +L L++KM + Y+ ++ K + D+
Sbjct: 204 DLVTYGAVINGLCK---RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ +EM KGIR DV++Y+ +S + G + M +++ +NPN TF+++
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM-LERKINPNVVTFNSLIDA 319
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPG 349
+ K G++ +AE+ + R + V Y+ L++ + + +E +++ L S P
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 350 VTNLGYHAMISSLARIGD-IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
V Y+ +I+ + ++GME +F + + ++ + + + D A+
Sbjct: 380 VVT--YNTLINGFCKAKKVVDGME-LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F ++ +G PN ++ TL +G + ++ +A+
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 122/266 (45%), Gaps = 9/266 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+LLN + A L+D+M + GY ++ + ++ + + E ++V M K
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G + D+ +Y ++ +G + + M+ K + + +ST+ K V+
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYSTVIDSLCKYRHVDD 258
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAM 358
A ++++ D Y L+S + G+ + R+ + L R + P V ++++
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT--FNSL 316
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEE 416
I + A+ G + EK+F+E ++ S DP I N +++ + D+A+ F ++ +
Sbjct: 317 IDAFAKEGKLIEAEKLFDEM--IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
P+ ++ TL G + +++++ +
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGM 400
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 104/236 (44%), Gaps = 2/236 (0%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D L D Y L+N + +A+ + L M +G +++ Y ++ + + + D
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ + +M G+ ++ +YN L G EK VFE ++ K + P+ T++ M+
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK-MEPDIYTYNIMSE 493
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
K G+VE + + + D + Y+ ++S + G KEE Y ++ + P
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
+ Y+ +I + R GD ++ +E S + + D L+ + +G DK
Sbjct: 554 DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM-LHDGRLDKG 608
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 122/274 (44%), Gaps = 5/274 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
++ +Y ++N + + + + L KM+ G + YN ++T Y + + +
Sbjct: 176 NQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVF 235
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ ++G+ + +YNI + +G K EG+ E MK +NP TF+ +
Sbjct: 236 DEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMK-RAHINPTTRTFNMLMDGLCN 294
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
GQ++KA L +++ V Y+ L+S + VG V + R + P +
Sbjct: 295 TGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISP--SK 352
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y ++++ R DIE ++F + D +++ +GN +A + S
Sbjct: 353 VTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKS 412
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++E +PN + T+ G+ +E +AL L+
Sbjct: 413 MVEMHLQPNDVIYNTMINGYCKECNSYKALKFLE 446
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 125/280 (44%), Gaps = 1/280 (0%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ L L + Y +L+ Y R A + D++ +G A +++ YN+++ + +
Sbjct: 203 MKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQ 262
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+ E ++ MK I ++N+ + + G +K E +K+ + P T++
Sbjct: 263 VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKL-IGLCPTLVTYN 321
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
+ + + K+G E +R +E R +V Y L++ + E+ Y +++L + +
Sbjct: 322 ILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRI 381
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
Y +I L G++ K+++ + + + I N M++ Y KE N KA
Sbjct: 382 GLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKA 441
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
F +++ G PN S+ + + ++ + +EA LK
Sbjct: 442 LKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLK 481
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 121/296 (40%), Gaps = 8/296 (2%)
Query: 150 LDLIAKVHGVASAEDFFLS-LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
LDL+AK + FF L T D +G + A+ L+ +M G +
Sbjct: 80 LDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVS 139
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ Y +++ + + D+ + M S M + G+ + Y Y I ++ +G + +
Sbjct: 140 PNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFEL 199
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
++ MK+ V PN T++++ T Y + G++ A + + R + V Y+ L+ G
Sbjct: 200 YQKMKL-VGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILI---G 255
Query: 329 SVGKKEEVYRVWNLY---RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+ +K +V + L + T ++ ++ L G ++ E+ +
Sbjct: 256 GLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCP 315
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N+++S + K GN + + G P+ ++ L +R I +A
Sbjct: 316 TLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKA 371
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 156/348 (44%), Gaps = 20/348 (5%)
Query: 98 EKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVH 157
E+GG + K+ ++ K R + A++V+D M +GE + +A+ + + +
Sbjct: 175 ERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGE-----VAPSAVMYNALIGGY 229
Query: 158 GVASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
D L + + R + Y L++A +A ++++M+ G++
Sbjct: 230 CDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDV 289
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
YN+++ Y K + + EM +KG+R +Y + +G ++ + +F +
Sbjct: 290 FTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNV 349
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
V K + P+ ++ + + G +E+A E + +E + D + Y+ L+ + +G
Sbjct: 350 -AVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLG 408
Query: 332 KKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+ +E + + R + P + + Y+ +IS + GDI+ ++ +E + ++P +
Sbjct: 409 RLDEARTLIDEMTKRGIQPDLVS--YNTLISGYSMKGDIKDALRVRDEMMD--KGFNPTL 464
Query: 390 A--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
N ++ K D AE ++ +G P+ +++ +L EG E
Sbjct: 465 MTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 6/271 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKG-YAVHSLPYNVMMTLYMKIKEYDEVESM 233
D+ Y L++ + + +A + D+M KG A ++ YN ++ Y + + D
Sbjct: 182 DKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQY 241
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+M ++GI + V +YN+ + + V E M+ +P+ T++ + Y
Sbjct: 242 REDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQ-KNGFSPDVFTYNILINGYC 300
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVT 351
K G +KA E + + V Y L+ ++ G+ +E R++N+ + + P V
Sbjct: 301 KEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDV- 359
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y+A+I+S GD+E +I E + D N +M + G D+A +
Sbjct: 360 -VMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLID 418
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ + G +P+ S+ TL G+ + I +AL
Sbjct: 419 EMTKRGIQPDLVSYNTLISGYSMKGDIKDAL 449
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 6/254 (2%)
Query: 73 WNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWM 132
+N + L MD + +VL + +K G S + ++ K K ALEV++ M
Sbjct: 257 YNLLMHAL-FMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEM 315
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF-LSLPDTLK-DRRVYGALLNAYVRAR 190
+ +G R +A + + ++ V + F +++ ++ D +Y AL+N++
Sbjct: 316 SQKG--VRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGG 373
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
A ++ +M K + YN +M + + DE +++ EM ++GI+ D+ SYN
Sbjct: 374 DMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYN 433
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
+S +G + V + M +DK NP T++ + K+ Q + AE ++ + +
Sbjct: 434 TLISGYSMKGDIKDALRVRDEM-MDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVA 492
Query: 311 RITGRDRVPYHYLL 324
+ D Y L+
Sbjct: 493 KGITPDDSTYISLI 506
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
++NI L + G + EL++ + PN T++T+ + G+V+ A E +R
Sbjct: 118 TFNIMLRHLCATGKPVR---ALELLR--QMPRPNAVTYNTVIAGFCARGRVQAALEVMRE 172
Query: 308 VESR-ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS---VFPGVTNLGYHAMISSLA 363
+ R D+ Y L+S + +G+ E+ +V++ + V P + + Y+A+I
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAP--SAVMYNALIGGYC 230
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
+G ++ + E+ + + NL+M + A A + + G P+
Sbjct: 231 DVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVF 290
Query: 424 SWETLAEGHIRE 435
++ L G+ +E
Sbjct: 291 TYNILINGYCKE 302
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 42/226 (18%), Positives = 93/226 (41%), Gaps = 5/226 (2%)
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG-IRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+++ YN ++ + ++ EM+E+G I D Y+Y +S G E V
Sbjct: 146 NAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKV 205
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
F+ M V P+ ++ + Y +G+++ A + + R Y+ L+
Sbjct: 206 FDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALF 265
Query: 329 SVGKKEEVYRVW-NLYRSVF-PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
+ + Y V + ++ F P V Y+ +I+ + G+ + ++FEE
Sbjct: 266 MDARASDAYAVLEEMQKNGFSPDV--FTYNILINGYCKEGNEKKALEVFEEMSQKGVRAT 323
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
++ + ++G + + FN +++G +P+ + L H
Sbjct: 324 AVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSH 369
>gi|255576798|ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531275|gb|EEF33118.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 161/400 (40%), Gaps = 47/400 (11%)
Query: 80 LSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERF 139
L + +P L SA + G L +L +++ L K R++ +++DWM
Sbjct: 91 LEVQQSPDLDSA-----LRRLGAILKAQDLNVILRNLGKQSRWQDLSKLFDWMQQHS--- 142
Query: 140 RLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVY--GALLNAYVRARMRGNAEL 197
++S S + + K A A + + S+ D V+ ++L+ VR+ +
Sbjct: 143 KISVSSYTSYMKFMGKSLNPAKALEIYNSIADESVKNNVFICNSVLSCLVRSGKFDISLK 202
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKE-YDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
L KM+ G ++ Y+ +++ +K K+ Y + V E+K G+++D Y L+ C
Sbjct: 203 LFHKMKQNGLTPDTITYSTLLSGCIKAKDGYSKTLDFVQELKYNGLQMDTVIYGTILAVC 262
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE------SLRRVES 310
S E+ E F MK + + PN +S++ Y G +KAEE SL V +
Sbjct: 263 ASHNRCEEAESYFSQMKNEGHL-PNVFHYSSLLNAYASSGNYKKAEELVQDMKSLGLVPN 321
Query: 311 RIT-----------------------------GRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
++ D +PY L+ G+ +E ++
Sbjct: 322 KVIWTTLLKVYVRGGLFEKSQQLLLELETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFD 381
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ Y MIS+ R +E +++ +E+ + YD I N M+ Y + G
Sbjct: 382 EMKEKNVKSDGYAYSIMISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAG 441
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ + + E P+ ++ L + +++ L A
Sbjct: 442 DMESVMQTMRKMDELAISPSYCTFHILIKYFCKQKLYLLA 481
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 126/287 (43%), Gaps = 31/287 (10%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y AL+NAYV+ R AE L D+M +G +++ YN M+ + K D E M M
Sbjct: 321 TYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVM 380
Query: 238 KEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
KG DV+++N + CG++ + E + E+ + + + TT++T+ + +G
Sbjct: 381 ATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEM--TETGLVADTTTYNTLIHGFCLVG 438
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+ A + +++ S D V + LL GK ++ ++ +
Sbjct: 439 DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK----------S 488
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
M +R G+E D + N+++S + EG F +AE + +
Sbjct: 489 KMDLDASR--PFNGVEP------------DVQTYNILISGLINEGKFLEAEELYKEMPHR 534
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVN 463
G PN+ ++ ++ G ++ R+ EA F + G+KS+ P V
Sbjct: 535 GIVPNTITYSSMINGLCKQSRLDEATQ----MFDSMGSKSFSPDVVT 577
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 117/279 (41%), Gaps = 14/279 (5%)
Query: 159 VASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
V+ A D F + P+ + + L+N R A L+D+M + G + + Y
Sbjct: 163 VSEALDLFHQMCRPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 218
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKG-IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ KI + +++ +M+E I+ +V Y+ + G ++ M+ +
Sbjct: 219 IVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQ-E 277
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
K + P+ T++ M + G+ +A+ L+ + R + V Y L++ Y K+ +
Sbjct: 278 KGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAY---VKERK 334
Query: 336 VYRVWNLYRSVFP-GV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
+ LY + P G+ + Y++MI + ++ E +F + S D N
Sbjct: 335 FFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNT 394
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
++ Y D + + E G ++T++ TL G
Sbjct: 395 LIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHG 433
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 122/311 (39%), Gaps = 51/311 (16%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKD 175
K R++ A E+YD M RG ++ I D K + + +AE F ++ D
Sbjct: 331 KERKFFEAEELYDEMLPRGIIPNTITYNSMI--DGFCKQNRLDAAEHMFYVMATKGCSPD 388
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY-------- 227
+ L++ Y A+ + L+ +M + G + YN ++ + + +
Sbjct: 389 VFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQ 448
Query: 228 ----------------------------DEVESMVSEMKEK----------GIRLDVYSY 249
D +E + K K G+ DV +Y
Sbjct: 449 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTY 508
Query: 250 NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
NI +S ++G + E +++ M + + PN T+S+M K ++++A + +
Sbjct: 509 NILISGLINEGKFLEAEELYKEMP-HRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMG 567
Query: 310 SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE 369
S+ D V ++ L+S Y G+ ++ ++ + Y +I ++G+I
Sbjct: 568 SKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNIN 627
Query: 370 GMEKIFEEWLS 380
G IF+E +S
Sbjct: 628 GALDIFQEMIS 638
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 88/212 (41%), Gaps = 4/212 (1%)
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
E +++ M E G++ + +Y + G T + M+ + PN +S +
Sbjct: 196 EAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAI 255
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSV 346
K G+ A ++ + D Y+ ++ + S G+ E R+ L R +
Sbjct: 256 IDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKI 315
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
P V Y A+I++ + E++++E L + N M+ + K+ D A
Sbjct: 316 NPNVVT--YSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAA 373
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
E F + +G P+ ++ TL +G+ +RI
Sbjct: 374 EHMFYVMATKGCSPDVFTFNTLIDGYCGAKRI 405
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Query: 162 AEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AE+ + +P + + Y +++N + A + D M K ++ + +N +++
Sbjct: 524 AEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVS 583
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
Y K D+ + EM +GI D +Y + G+ +F+ M + V
Sbjct: 584 GYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEM-ISSGVY 642
Query: 280 PNWTTFSTMATM 291
P+ T +M T+
Sbjct: 643 PDTITIRSMLTV 654
>gi|15230719|ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2750; Flags: Precursor
gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein [Arabidopsis thaliana]
gi|20466300|gb|AAM20467.1| unknown protein [Arabidopsis thaliana]
gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis thaliana]
gi|332640870|gb|AEE74391.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 486
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 18/261 (6%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRD-KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+Y ALL AY R+ + +A ++DKM+ Y+ ++ + ++D V+S+ E
Sbjct: 161 LYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKE 220
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M E+ I + + NI LS G G ++ME V M V A P+ T + + +++ MG
Sbjct: 221 MDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMG 280
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV-FPGVTNLGY 355
+++ E + + + ++ L+ YG +++ V R + FP T+ Y
Sbjct: 281 KIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTST-Y 339
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA--------- 406
+ +I + A +GD + ME F++ S D + +++ Y G F K
Sbjct: 340 NNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAK 399
Query: 407 ------EAFFNSIIEEGGKPN 421
AF+N++I K +
Sbjct: 400 FEIPENTAFYNAVISACAKAD 420
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 118/280 (42%), Gaps = 49/280 (17%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
S P D Y LL A V A + L +M ++ +++ N++++ Y ++ +
Sbjct: 187 SFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRF 246
Query: 228 DEVESMVSEM-KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
D++E ++S+M + DV++ NI LS G+ G + ME +E + + + P TF+
Sbjct: 247 DQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFR-NFGIEPETRTFN 305
Query: 287 TM------ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
+ MY KM V E +R++E T Y+ ++ + VG + + +
Sbjct: 306 ILIGSYGKKRMYDKMSSV---MEYMRKLEFPWTTS---TYNNIIEAFADVGDAKNMELTF 359
Query: 341 NLYRS------------VFPGVTNLG-----------------------YHAMISSLARI 365
+ RS + G N G Y+A+IS+ A+
Sbjct: 360 DQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKA 419
Query: 366 GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
D+ ME+++ + D R +M+ Y KEG DK
Sbjct: 420 DDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDK 459
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 97/212 (45%), Gaps = 6/212 (2%)
Query: 198 LIDKMRDKG-YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
+ D +R++ Y Y ++ L K + + + + EM E+G+ V Y L++
Sbjct: 110 VFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAY 169
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
+ + + MK P+ T+ST+ + Q + + + ++ R+ +
Sbjct: 170 TRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPN 229
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWN---LYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
V + +LS YG VG+ +++ +V + + + P V + + ++S +G I+ ME
Sbjct: 230 TVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTM--NIILSVFGNMGKIDMMES 287
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+E++ + + R N+++ Y K+ +DK
Sbjct: 288 WYEKFRNFGIEPETRTFNILIGSYGKKRMYDK 319
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 121/271 (44%), Gaps = 7/271 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL+N RA AE ++ +M DKG V ++ Y V++ Y K+ + E +
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M +K + +V +Y QG + M K + N T++++ K
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM-CSKGLELNIFTYNSLINGLCK 507
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-PGV--T 351
G +E+A ++ ++ D Y ++ G++ + +E+ R +L + + G+ T
Sbjct: 508 AGNLEQAMRTMIDMDEAGLKPDVYTY---TTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y+ +++ G +EG +++ E L + N +M Y E N +
Sbjct: 565 IVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYK 624
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ + PN ++ L +GH + R + EAL
Sbjct: 625 GMLSQEVVPNENTYNILIKGHCKARNMKEAL 655
>gi|356528278|ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Glycine max]
Length = 1079
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 133/305 (43%), Gaps = 6/305 (1%)
Query: 140 RLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV-YGALLNAYVRARMRGNAELL 198
R+ + A + K + AED F ++ +V Y +++NAY + + A LL
Sbjct: 680 RMDEATVASLISHYGKQQMLKQAEDIFAEYINSPTSSKVLYNSMINAYAKCGKQEKAYLL 739
Query: 199 IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGS 258
+ +G + ++ ++ + ++ E E++V E+ + LD +YN ++ +
Sbjct: 740 YKQATGEGRDLGAVGISIAVNSLTNGGKHQEAENIVQRSLEENLELDTVAYNTFIKAMLE 799
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
G +FE M + V P+ TF+TM ++Y + ++++A E + S D
Sbjct: 800 AGKLHFASSIFEHM-ISSGVAPSIETFNTMISVYGQDQKLDRAVEMFNQASSCSVPLDEK 858
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y L+ YG G E ++++ + + PG + Y+ MI+ A G + EK+F
Sbjct: 859 TYMNLIGYYGKAGLMLEASQLFSKMQEGGIKPG--KVSYNIMINVYANAGVLHETEKLFH 916
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
D ++ Y + N+ KAE +++ +G P+ + L I+
Sbjct: 917 TMQRQGYLPDSFTYLSLVQAYTRSLNYSKAEETIHAMQSKGIPPSCVHFNILLHAFIKAG 976
Query: 437 RILEA 441
I EA
Sbjct: 977 LIHEA 981
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 8/288 (2%)
Query: 164 DFFLSLPDTLKDRR---VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTL 220
DFF + L R VY +L Y + AE + +M D G + M+
Sbjct: 181 DFFAWMKLQLSYRPSVIVYTIVLRLYGQVGKLKLAEEIFLEMLDVGCEPDEVACGTMLCS 240
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
Y + + + S S +KE+GI L V +N +SS + ++ V++ M + K V P
Sbjct: 241 YARWGRHKAMLSFYSAIKERGIILSVAVFNFMMSSLQKKSLHREVVHVWKDM-LGKGVIP 299
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
N T++ + ++K G E A ++ + + + + Y L++L G ++EV R++
Sbjct: 300 NNFTYTVAISSFVKEGLHEDAFKTFDEMRNYGVVPEELTYSLLINLNAKSGNRDEVQRLY 359
Query: 341 N--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
+R + P +N +++S + D +F E + K S D I L++ Y
Sbjct: 360 EDMRFRGIIP--SNYTCASLLSLYYKYEDYPRALSLFSEMVRNKISTDEVIYGLLIRIYG 417
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
K G ++ A F G + ++ +A+ H+ + +AL ++
Sbjct: 418 KLGLYEDAHKTFEETKNRGQLTSEKTYLAMAQVHLTSGNVDKALEVIE 465
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 2/164 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++N Y A + E L M+ +GY S Y ++ Y + Y + E + M+
Sbjct: 895 YNIMINVYANAGVLHETEKLFHTMQRQGYLPDSFTYLSLVQAYTRSLNYSKAEETIHAMQ 954
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
KGI +NI L + G + + V+E + V P+ TM Y+K G V
Sbjct: 955 SKGIPPSCVHFNILLHAFIKAGLIHEAKRVYEDLSTFGLV-PDLVCHRTMLNGYLKCGYV 1013
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
E+ + T DR + Y S GK + + NL
Sbjct: 1014 EEGINFFESI-CESTKSDRFIMSAAVHFYKSAGKGRQAKEILNL 1056
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 125/309 (40%), Gaps = 5/309 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ++++V+ + +A D+MR+ G L Y++++ L K DEV+ + +M
Sbjct: 303 TYTVAISSFVKEGLHEDAFKTFDEMRNYGVVPEELTYSLLINLNAKSGNRDEVQRLYEDM 362
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +GI Y+ LS + +F M V ++ + + + +Y K+G
Sbjct: 363 RFRGIIPSNYTCASLLSLYYKYEDYPRALSLFSEM-VRNKISTDEVIYGLLIRIYGKLGL 421
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E A ++ ++R Y + ++ + G ++ V L +S + Y
Sbjct: 422 YEDAHKTFEETKNRGQLTSEKTYLAMAQVHLTSGNVDKALEVIELMKSSNLWFSRFAYIV 481
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++ D+ E F LS D N M+S Y+ +KA+ F I E
Sbjct: 482 LLQCYVMKEDVASAEGTFLA-LSKTGPPDAGSCNDMLSLYMGLNLTNKAKEFIVQIRENE 540
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
+ + T+ + + +E + EA E K+ + + ++ CE + DM
Sbjct: 541 TNFDKELYRTVMKVYCKEGMLPEAEQLTNQMVKTEYFKNDK---FFMTFYWILCEHKGDM 597
Query: 478 GSKEAFVAL 486
S + VA+
Sbjct: 598 ESDDELVAI 606
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/354 (18%), Positives = 142/354 (40%), Gaps = 43/354 (12%)
Query: 108 ELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFL 167
E+C V+KE + +R+ + + + WM + +R S I L L +V + AE+ FL
Sbjct: 165 EMCVVLKEQKGWRQVR---DFFAWMKLQ-LSYRPSVIVYTIVLRLYGQVGKLKLAEEIFL 220
Query: 168 SLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
+ D D G +L +Y R ++++G + +N MM+ K
Sbjct: 221 EMLDVGCEPDEVACGTMLCSYARWGRHKAMLSFYSAIKERGIILSVAVFNFMMSSLQKKS 280
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSC----------------------------- 256
+ EV + +M KG+ + ++Y + +SS
Sbjct: 281 LHREVVHVWKDMLGKGVIPNNFTYTVAISSFVKEGLHEDAFKTFDEMRNYGVVPEELTYS 340
Query: 257 ------GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVES 310
G+ ++++ ++E M+ + N+T +++ ++Y K +A +
Sbjct: 341 LLINLNAKSGNRDEVQRLYEDMRFRGIIPSNYTC-ASLLSLYYKYEDYPRALSLFSEMVR 399
Query: 311 RITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEG 370
D V Y L+ +YG +G E+ ++ + ++ + Y AM G+++
Sbjct: 400 NKISTDEVIYGLLIRIYGKLGLYEDAHKTFEETKNRGQLTSEKTYLAMAQVHLTSGNVDK 459
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
++ E S + +++ YV + + AE F + + + G P++ S
Sbjct: 460 ALEVIELMKSSNLWFSRFAYIVLLQCYVMKEDVASAEGTFLA-LSKTGPPDAGS 512
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/167 (18%), Positives = 71/167 (42%), Gaps = 2/167 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +YG L+ Y + + +A ++ +++G Y M +++ D+ ++
Sbjct: 405 DEVIYGLLIRIYGKLGLYEDAHKTFEETKNRGQLTSEKTYLAMAQVHLTSGNVDKALEVI 464
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MK + ++Y + L + EG F + + K P+ + + M ++Y+
Sbjct: 465 ELMKSSNLWFSRFAYIVLLQCYVMKEDVASAEGTF--LALSKTGPPDAGSCNDMLSLYMG 522
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
+ KA+E + ++ T D+ Y ++ +Y G E ++ N
Sbjct: 523 LNLTNKAKEFIVQIRENETNFDKELYRTVMKVYCKEGMLPEAEQLTN 569
>gi|326495542|dbj|BAJ85867.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 137/329 (41%), Gaps = 33/329 (10%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIA---------KVHGVASA 162
+K LR RR+ A ER L D+ + LD I + A A
Sbjct: 181 ALKSLRAARRWDEA-----------ERLALDMVDSGVPLDNITYSTLITAARRCRQFAKA 229
Query: 163 EDFFLSL--PDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
++F + P + L D Y A+L+ Y + RM+ L D+ R G+ + + V+
Sbjct: 230 VEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGSGWKPDHVAFAVLA 289
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
++ + +YD ++ + EM+E G + +++ YN L + G G +FE M + V
Sbjct: 290 KMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTGKPGLARNLFEEMTAE-GV 348
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
PN T + +A +Y + A + ++ + D + + LLS+ VG E +
Sbjct: 349 EPNARTLTAVAKIYGRARWGRDALQLWDQMREKKIPADSILCNTLLSMCADVGLVAEAEQ 408
Query: 339 VWNLYRSVFPGVTNL------GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
++ + P +T++ Y AMI+ I D + ++F E L + +
Sbjct: 409 LFEEMKD--PDLTDVPQPDKWSYTAMINIYGSIKDADRALQLFVEMLQSGIEANIMSYTI 466
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
++ K A + +E G KP+
Sbjct: 467 VIQCLGKANRIRDAVEMLEAGLERGLKPD 495
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 113/291 (38%), Gaps = 49/291 (16%)
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLI---DKMRDKGY 207
DL +H F LPD+ LLN Y+ R LL D G+
Sbjct: 120 DLAPTLHA-------FFPLPDSPPTSSDALLLLN-YLHPSWRKTLSLLAYLRGLPADAGF 171
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
AV ++ +NV + + +DE E + +M + G+ LD NI
Sbjct: 172 AVDTILFNVALKSLRAARRWDEAERLALDMVDSGVPLD----NI---------------- 211
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG--RDRVPYHYLLS 325
T+ST+ T + Q KA E R+ S + D V Y +L
Sbjct: 212 ----------------TYSTLITAARRCRQFAKAVEWFERMYSPGSAVLPDEVTYSAVLD 255
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+Y + KEEV +++ R ++ + + GD +G++ +F+E V +
Sbjct: 256 VYAQLRMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGTKP 315
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ + N ++ K G A F + EG +PN+ + +A+ + R R
Sbjct: 316 NIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTAVAKIYGRAR 366
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 129/297 (43%), Gaps = 40/297 (13%)
Query: 151 DLIAKVHGVASAEDFFLSLPDTLK----DRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+LI V+S+ED F +L + + ++ L+ AYV+ + + KM G
Sbjct: 157 ELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLG 216
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
+ + + N ++ K+K + + EM G+ + Y++NI G K+
Sbjct: 217 FVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKIN 276
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
G E M+ ++ +P+ T++T+ Y++ G++E A YL +
Sbjct: 277 GFLEKME-EEGFDPDVVTYNTLIDSYVRRGRLEDA-------------------FYLYKI 316
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
+YR R V P + + Y +++ L R+G + ++F + D
Sbjct: 317 ---------MYR-----RGVMPDL--VSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPD 360
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ N ++ Y K+G +A + + +I G P+S + L EG+ RE R++ AL+
Sbjct: 361 VVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALN 417
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 105/262 (40%), Gaps = 7/262 (2%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y +L+ R A L +M D+G + YN ++ Y K E
Sbjct: 322 VMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEAR 381
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
S++ EM GI D ++ I + G +G + V E+ K+ V + + +
Sbjct: 382 SLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHD--IYKYLII 439
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFP 348
+ + A+ L R+ D Y+ L+ + E + ++ + R+ P
Sbjct: 440 SLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKP 499
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
T Y ++I + I E + E + + D I +++ Y KEGN DKAE+
Sbjct: 500 --TTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAES 557
Query: 409 FFNSIIEEGGKPNSTSWETLAE 430
S ++ +S S+ +L +
Sbjct: 558 LLVSFAKDFQFFDSESFNSLVK 579
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 127/285 (44%), Gaps = 8/285 (2%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D + L++ + + + L+++M ++G + Y ++ + K DE
Sbjct: 362 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEA 421
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ M G + + SY I L C ++ + + + ++++ +NP TF+T+
Sbjct: 422 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP--ITFNTLI 479
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K G VE+A E L+++ D + Y ++ G GK +E + N+ +
Sbjct: 480 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 539
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y ++ S+L+R G I + ++F+ D + N ++S K G ++A F
Sbjct: 540 PNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEF 599
Query: 410 FNSIIEEGGKPNSTSWETL-----AEGHIRERRILEALSCLKGAF 449
++ G PN +++ L +EG ++E + + C KGA
Sbjct: 600 LAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 166/425 (39%), Gaps = 52/425 (12%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
VV+ L R AL V D M RG + + L A G F S
Sbjct: 128 VVRALCARGRIADALAVLDEMPRRG----CAPIPPMYHVILEAACRGGG-----FRSAVR 178
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY---AVH---SLP----------YN 215
L+D G L+ GN L+++ + D+G A+H LP YN
Sbjct: 179 VLEDLHARGCALDV-------GNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYN 231
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ K + V+ ++ EM ++ ++N +S G E++ V M V+
Sbjct: 232 AVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM-VE 290
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
P+ ++T+ K G +E A E L R+ S + V Y+ LL S + EE
Sbjct: 291 HGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEE 350
Query: 336 VYRVW-NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
+ ++ P + ++ ++ ++ + G ++ + ++ E+ L D ++
Sbjct: 351 TEELLAEMFDKDCP-LDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVI 409
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGA 454
+ + KEG D+A S+ G KPN+ S+ + +G R ++A L +G
Sbjct: 410 NGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED-LMSQMIQQGC 468
Query: 455 KSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ-------P---GYRKEKDYMSLIGL 504
P+N I F G E + LL+Q P Y D + G
Sbjct: 469 ------PLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522
Query: 505 TDEAV 509
TDEA+
Sbjct: 523 TDEAL 527
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/264 (18%), Positives = 121/264 (45%), Gaps = 1/264 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R+Y +++ + A ++++M G + + YN ++ + ++E E ++
Sbjct: 296 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 355
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM +K LD ++NI + G +++ + E M +++ P+ T++T+ + K
Sbjct: 356 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LERGCMPDVITYTTVINGFCK 414
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G +++A L+ + + + + Y +L S + + + + + +
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 474
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +I+ L + G +E ++ ++ L S D + ++ K G D+A N ++
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
+G PN+ + ++A RE RI
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRI 558
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ +A A L++ M +KG + +++ Y+ + + + ++V M ++
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ 569
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ IR D YN +SS +G TE+ M V PN +T++ + G V
Sbjct: 570 DTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM-VSSGCVPNESTYTILIRGLASEGFV 628
Query: 299 EKAEESLRRVESRITGRDRVPYHY 322
++A+E L + S+ R + H+
Sbjct: 629 KEAQEMLTELCSKGALRKHLMKHF 652
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 170/415 (40%), Gaps = 50/415 (12%)
Query: 63 VDFERRP-MIKWNAIFRKLSLMDNPQLGSASVLND-WEKGGRSLTKWELCRVVKELRKFR 120
V+ +P +I NA+ L L N ++ A +L D + G + V+K + K
Sbjct: 169 VEMGHKPTLITLNALVNGLCL--NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRV 178
+ A+E+ M R + +L A +I +D + K + +A + F + + D +
Sbjct: 227 QTALAMELLRKMEER--KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 179 YGALLNAYVRA-RMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ + A R A+LL D ++ K + ++ ++ ++K + E E + EM
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRK-ITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++GI D +Y + + +K + +LM V K PN TF+ + Y K
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM-VSKGCGPNIRTFNILINGYCKANL 402
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
++ E R++ R D V Y+ L+ + +GK E ++ + R V P + + Y
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS--Y 460
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL----------------------- 392
++ L G+ E +IFE+ K D I N+
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 393 ------------MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
M+ K+G+ +A+ F + E+G PN ++ L H+ E
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 106/260 (40%), Gaps = 1/260 (0%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
++N R R A + K+ GY ++ ++ ++ E +V M E G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ + + N ++ G + + M V+ PN T+ + + K GQ A
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
E LR++E R D V Y ++ G + + ++N + Y +I
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
G + K+ + + K + D + ++ +VKEG +AE +I+ G P+
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 422 STSWETLAEGHIRERRILEA 441
+ ++ +L +G +E ++ +A
Sbjct: 352 TVTYTSLIDGFCKENQLDKA 371
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 105/262 (40%), Gaps = 36/262 (13%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
AL+N +A LLID+M + G+ + + Y ++ + K + ++ +M+E+
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
I+LD Y+I + GS + +F M++ K + ++T+ + G+ +
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI-KGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
+ LR + + R + P V + + A+I
Sbjct: 301 GAKLLRDM---------------------------------IKRKITPDV--VAFSALID 325
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
+ G + E++ +E + S D ++ + KE DKA + ++ +G P
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 421 NSTSWETLAEGHIRERRILEAL 442
N ++ L G+ + I + L
Sbjct: 386 NIRTFNILINGYCKANLIDDGL 407
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 95/224 (42%), Gaps = 9/224 (4%)
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
+ ++ + ++ + K+YD V + +M+ KGI ++Y+ +I ++ C K+ F
Sbjct: 73 IDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC---CRCRKLSLAFSA 129
Query: 272 MK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
M + P+ TFST+ G+V +A E + R+ + + L++
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 330 VGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
GK + V + R V G + Y ++ + + G ++ + K D
Sbjct: 190 NGKVSDA--VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDA 247
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
++++ K+G+ D A FN + +G K + + TL G
Sbjct: 248 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 129/297 (43%), Gaps = 40/297 (13%)
Query: 151 DLIAKVHGVASAEDFFLSLPDTLK----DRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+LI V+S+ED F +L + + ++ L+ AYV+ + + KM G
Sbjct: 161 ELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLG 220
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
+ + + N ++ K+K + + EM G+ + Y++NI G K+
Sbjct: 221 FVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKIN 280
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
G E M+ ++ +P+ T++T+ Y++ G++E A YL +
Sbjct: 281 GFLEKME-EEGFDPDVVTYNTLIDSYVRRGRLEDA-------------------FYLYKI 320
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
+YR R V P + + Y +++ L R+G + ++F + D
Sbjct: 321 ---------MYR-----RGVMPDL--VSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPD 364
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ N ++ Y K+G +A + + +I G P+S + L EG+ RE R++ AL+
Sbjct: 365 VVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALN 421
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 105/262 (40%), Gaps = 7/262 (2%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y +L+ R A L +M D+G + YN ++ Y K E
Sbjct: 326 VMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEAR 385
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
S++ EM GI D ++ I + G +G + V E+ K+ V + + +
Sbjct: 386 SLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHD--IYKYLII 443
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFP 348
+ + A+ L R+ D Y+ L+ + E + ++ + R+ P
Sbjct: 444 SLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKP 503
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
T Y ++I + I E + E + + D I +++ Y KEGN DKAE+
Sbjct: 504 --TTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAES 561
Query: 409 FFNSIIEEGGKPNSTSWETLAE 430
S ++ +S S+ +L +
Sbjct: 562 LLVSFAQDFQFFDSESFNSLVK 583
>gi|297736801|emb|CBI26002.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 127/273 (46%), Gaps = 23/273 (8%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP--------YNVMMTLYMKIKEYDE 229
+Y ALL +Y R+ + A ++++M+ +LP Y+ ++ + ++
Sbjct: 181 LYTALLASYCRSNLIDEAFSILNQMK-------TLPRCQPDVFTYSTLLKACVDASRFEL 233
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
VES+ EM + I + + NI LS G G ++ME V M + P+ T +T+
Sbjct: 234 VESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTIL 293
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV-FP 348
+++ GQ+E E+ + + + ++ L+ YG +++ V R + FP
Sbjct: 294 SLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
T+ Y+ +I + + +GD + ME F++ + D + ++ Y G F KAE
Sbjct: 354 WTTST-YNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKAED 412
Query: 409 F------FNSIIEEGGKPNSTSWETLAEGHIRE 435
FN + ++ +P+ST++ + E + +E
Sbjct: 413 LIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKE 445
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 14/248 (5%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
+LP D Y LL A V A E L ++M + +++ N++++ Y K ++
Sbjct: 207 TLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKF 266
Query: 228 DEVESMVSEMKEK-GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
DE+E ++S M E + DV++ N LS G++G E ME +E + + + P TF+
Sbjct: 267 DEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFR-NFGIEPETRTFN 325
Query: 287 TMATMYIKMGQVEKAE---ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
+ Y K +K E +R+++ T Y+ ++ + VG + + ++
Sbjct: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTS---TYNNVIEAFSDVGDAKNMEYTFDQM 382
Query: 344 RSVFPGVTNLGYHAMISSLARIG------DIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
R+ + +I A G D+ ME++F D ++M+ Y
Sbjct: 383 RAEGMKADTKTFCCLIRGYANAGLFHKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAY 442
Query: 398 VKEGNFDK 405
KEG DK
Sbjct: 443 KKEGMNDK 450
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 38/213 (17%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE-KGIRLDVYSYNIWL 253
A L D M ++G + Y ++ Y + DE S++++MK + DV++Y+ L
Sbjct: 163 AHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLL 222
Query: 254 SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+C E +E ++E M V +++ PN T
Sbjct: 223 KACVDASRFELVESLYEEMDV-RSITPNTVT----------------------------- 252
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
+ +LS YG GK +E+ +V + + S + ++S G IE ME
Sbjct: 253 ------QNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIME 306
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
K +E++ + + R N+++ Y K+ +DK
Sbjct: 307 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDK 339
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 150/338 (44%), Gaps = 12/338 (3%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL---PDT 172
LR+F+ + HA E + ++N G FR+ A A ++ ++ A+A FF L P
Sbjct: 304 LRRFK-WGHAAE--EALHNFG--FRMDAYQAN---QVLKQMDNYANALGFFYWLKRQPGF 355
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
D Y ++ RA+ G L+D+M G +++ YN ++ Y + E +
Sbjct: 356 KHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMN 415
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ ++M+E G D +Y + G + +++ M+ + ++P+ T+S +
Sbjct: 416 VFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ-EAGLSPDTFTYSVIINCL 474
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K G + A + + + V ++ +++L+ E +++ ++
Sbjct: 475 GKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDK 534
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y ++ L G +E E +F E D + L++ + K GN DKA ++ +
Sbjct: 535 VTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQA 594
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
+++ G +PN + +L +R R+ EA + L+ A
Sbjct: 595 MLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLA 632
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 24/259 (9%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRG-ERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL 169
R++ + K A+ V++ M G E R++ +D+ AK + A D + +
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTY---CTLIDIHAKAGFLDIAMDMYQRM 455
Query: 170 ------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
PDT Y ++N +A A L +M +G + + +N+M+ L+ K
Sbjct: 456 QEAGLSPDTF----TYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 511
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
+ Y+ + +M+ G + D +Y+I + G G E+ EGVF M+ V P+
Sbjct: 512 ARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEP 570
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY-HYLLSLYGSVGKKEEVYRVWNL 342
+ + ++ K G V+KA + + + + R VP + LLS + V + E Y NL
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAM-LQAGLRPNVPTCNSLLSTFLRVHRMSEAY---NL 626
Query: 343 YRSVFPGVTNLGYHAMISS 361
+S+ LG H + +
Sbjct: 627 LQSMLA----LGLHPSLQT 641
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 4/159 (2%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKD 175
K R Y+ AL++Y M N G F+ +I ++++ + AE F + + + D
Sbjct: 511 KARNYETALKLYRDMQNAG--FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPD 568
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
VYG L++ + +A A M G + N +++ ++++ E +++
Sbjct: 569 EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 628
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV 274
M G+ + +Y + LS C S M +LM V
Sbjct: 629 SMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAV 667
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 141/325 (43%), Gaps = 18/325 (5%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRG-ERFRLSASDAAIQLDL--IAKVHGVASAEDFFLS 168
VV+ L YK ++V RG E++R+ A+ + + +AK G A FL
Sbjct: 140 VVRRLASSGMYKDVIDVL-----RGLEKYRVKKDTVALNMVMHALAKQGGAKDAYSVFLE 194
Query: 169 LPDTLK-DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
D++ D + L++ Y ARM +A +++M G+ + Y + Y K K++
Sbjct: 195 FKDSITLDSHSFNILIHGYCEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDF 254
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
VE +++EM EKG DV +Y+I++ + G + V+E M + P+ FST
Sbjct: 255 RNVEVILNEMGEKGCEPDVIAYSIYIRALGKARKINEALEVYEKMN-KNSCKPDAKFFST 313
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--- 344
+ + + G++ A +E+ RD Y+ + +Y + ++ + L R
Sbjct: 314 LIYVLGRSGRLNDAWYVFEDMENHGVSRDLWTYNAM--IYHACANRQGNSALKLLERMEV 371
Query: 345 -SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
S P + Y ++ ++ D++ ++ + + D L++ + G
Sbjct: 372 NSCKPDLET--YQPLLKMCCKMKDMKVLKFLLSHMFNNNVRIDLSTYALLIRELAESGKL 429
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETL 428
+ A FF + G P ++E L
Sbjct: 430 EHACFFFQDAVLNGIVPKDRTYEIL 454
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 17/279 (6%)
Query: 162 AEDFFLSLPDTLK--DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
A D F+ + + D YGAL++ V A A + DKM ++G + YNV+M
Sbjct: 399 AFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMN 458
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
K + ++ EM + + LD + + G ++ + +FEL + K ++
Sbjct: 459 GLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFEL-TIAKGMD 517
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
P ++ M Y K G + A ++R++ D Y ++ Y K+ +++
Sbjct: 518 PGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYV---KQNDLHNA 574
Query: 340 WNLYRSVF-----PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--L 392
L+ + P V Y ++I+ R GD EK FEE S S P + +
Sbjct: 575 LKLFGQMVKQKCKPNVVT--YTSLINGFCRTGDSSRAEKTFEEMRS--SGLKPNVVTYTI 630
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
++ + KEG KA +FF ++ PN ++ L G
Sbjct: 631 LIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLING 669
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 125/282 (44%), Gaps = 5/282 (1%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
L + L YG ++N + + L+ +M+++G V+ YN ++ +K
Sbjct: 266 LKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGC 325
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
EV + + E G D+ +YN +S G + E + E + + ++PN +++
Sbjct: 326 KIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLE-HAIKRGLSPNKLSYT 384
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYR 344
+ +Y K G+ +A + + + D V Y L+ + G+ + V + + R
Sbjct: 385 PLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVER 444
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
V P Y+ +++ L + G + + + E L S D ++ ++ +++ G D
Sbjct: 445 GVLPDANV--YNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLD 502
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+A+ F I +G P + + +G+ + + +AL+C++
Sbjct: 503 EAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQ 544
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 153/362 (42%), Gaps = 39/362 (10%)
Query: 179 YGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
Y L++ Y + RG+ E L +++ KG+ + Y +M+ K + V+ ++
Sbjct: 243 YNTLVDGYWK---RGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLV 299
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EMKE+G+ ++V YN + + G ++ + + P+ TT++T+ + +
Sbjct: 300 EMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWI-TENGCEPDITTYNTLISGSCRD 358
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG- 354
G+V +AEE L R +++ Y L+ +Y GK R ++L F G+T G
Sbjct: 359 GKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGK---CLRAFDL----FIGMTEKGH 411
Query: 355 ------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
Y A++ L G+++ + ++ + D + N++M+ K+G A+
Sbjct: 412 PLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKL 471
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV------ 462
++ + ++ TL +G IR ++ EA K F AK P V
Sbjct: 472 LLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEA----KKLFELTIAKGMDPGVVGYNAMI 527
Query: 463 ------NVINFFKACEEESDMG--SKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNK 514
++N C + G S + F GY K+ D + + L + V + K
Sbjct: 528 KGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCK 587
Query: 515 KN 516
N
Sbjct: 588 PN 589
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 117/289 (40%), Gaps = 19/289 (6%)
Query: 162 AEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY 221
A D LPD + ALLNA ++ + A + ++M + + +M+
Sbjct: 160 AYDIHNYLPDVI----ACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGL 215
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
K ++ +E ++++ KG ++ YN + +G E+ G+F+ +K+ K P
Sbjct: 216 CKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKM-KGFLPT 274
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV-- 339
T+ M K + + L ++ R + Y+ ++ G K EV +
Sbjct: 275 TETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLR 334
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS-----VKSSYDPRIANLMM 394
W P +T Y+ +IS R G + E++ E + K SY P ++
Sbjct: 335 WITENGCEPDITT--YNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTP-----LI 387
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
Y K+G +A F + E+G + ++ L G + + AL+
Sbjct: 388 HVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALT 436
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D Y +++ YV+ NA L +M + + + Y ++ + + +
Sbjct: 550 DHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRA 609
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA- 289
E EM+ G++ +V +Y I + +G K FELM +++ + PN TF+ +
Sbjct: 610 EKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCI-PNDVTFNYLIN 668
Query: 290 --TMYIKMGQVEKAEESL 305
T + KA ESL
Sbjct: 669 GLTNNLATAVSNKANESL 686
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 121/290 (41%), Gaps = 37/290 (12%)
Query: 132 MNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARM 191
MN ++ RLSA+ +L L+ +H S + F V L++ ++R
Sbjct: 457 MNGLCKKGRLSAA----KLLLVEMLHQNLSLDAF------------VSATLVDGFIRHGK 500
Query: 192 RGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
A+ L + KG + YN M+ Y K ++ + V MK+ D ++Y+
Sbjct: 501 LDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYST 560
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ Q +F M V + PN T++++ + + G +AE++ + S
Sbjct: 561 IIDGYVKQNDLHNALKLFGQM-VKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSS 619
Query: 312 ITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVT-NLGYHAMISSLARIGD 367
+ V Y L+ + G + K + + L R + VT N + + ++LA
Sbjct: 620 GLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLA---- 675
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWY---VKEGNFDKAEAFFNSII 414
+ E L +K+S LMM ++ + +G +++ A +NS++
Sbjct: 676 -TAVSNKANESLEIKAS-------LMMDFFRTMISDG-WEQRVAAYNSVL 716
>gi|147841962|emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
Length = 701
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 12/223 (5%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK------DRRV 178
AL++YD R E++R+ + + +++G++ D L++ + +K + +
Sbjct: 265 ALKLYD--RARTEKWRIDP----VTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVI 318
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+A RA+ A+ + +M + G + Y ++ Y + + ++ + EMK
Sbjct: 319 YNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAALLRAYGRARYAEDALIVYKEMK 378
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG+ L V YN L+ C G TE+ +FE MK P+ TFS++ T+Y G+V
Sbjct: 379 EKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKV 438
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
+AE L + + L+ YG + +EV R ++
Sbjct: 439 SEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFD 481
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 142/324 (43%), Gaps = 28/324 (8%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS----AEDFFL 167
+K RK R A +++D M RG + I I V+S A ++F
Sbjct: 182 TLKVFRKCRNLDXAEKLFDEMLERGVK------PDNITFSTIISCARVSSLPNKAVEWFE 235
Query: 168 SLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
+P+ D Y A+++AY RA A L D+ R + + + + ++ ++ +Y
Sbjct: 236 KMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSG 295
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+D ++ EMK G++ ++ YN L + G + + +++ M + + +W T+
Sbjct: 296 NFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEM-TNNGLQLSWGTY 354
Query: 286 STMATMYIKMGQVEKAEESL---RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
+ + Y G+ AE++L + ++ + V Y+ LL++ VG EE ++
Sbjct: 355 AALLRAY---GRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFED 411
Query: 343 YRS---VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWY 397
+S P + + ++I+ + G + E + L ++ ++P I L ++ Y
Sbjct: 412 MKSSGNCMPD--SWTFSSLITIYSCSGKVSEAEAMLNAML--EAGFEPNIFVLTSLIQCY 467
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPN 421
K D+ F+ ++E P+
Sbjct: 468 GKANRTDEVVRTFDRLLELDITPD 491
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YNV + ++ K + D E + EM E+G++ D +++ +S K FE M
Sbjct: 179 YNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMP 238
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ +P+ T+S M Y + G V+ A + R + D V + L+ +YG G
Sbjct: 239 -EFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNF 297
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
+ V+ +++ + Y+ ++ ++ R
Sbjct: 298 DGCLNVYEEMKALGVKPNLVIYNTLLDAMGR 328
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 37/334 (11%)
Query: 145 DAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD 204
DA I L+ + A FF ++ +Y L + + R AE L D+M +
Sbjct: 145 DAVIVLNNMTNPETALLAFGFFRKRLKPSREVILYNVTLKVFRKCRNLDXAEKLFDEMLE 204
Query: 205 KGYA--------------VHSLP---------------------YNVMMTLYMKIKEYDE 229
+G V SLP Y+ M+ Y + D
Sbjct: 205 RGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDM 264
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ + + R+D +++ + G G+ + V+E MK V PN ++T+
Sbjct: 265 ALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKA-LGVKPNLVIYNTLL 323
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+ + +A+ + + + Y LL YG E+ V+ +
Sbjct: 324 DAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLE 383
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY-DPRIANLMMSWYVKEGNFDKAEA 408
++ + Y+ +++ A +G E IFE+ S + D + +++ Y G +AEA
Sbjct: 384 LSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEA 443
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
N+++E G +PN +L + + + R E +
Sbjct: 444 MLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVV 477
>gi|297847016|ref|XP_002891389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337231|gb|EFH67648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Query: 94 LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI 153
L W + G + + +V++ R ++ ALE +WM + F + D A +L+L+
Sbjct: 71 LERWRELGDQVKPSYVRGLVEDFRSTEQFSKALEASEWMCEQ-RVFNVFPEDYAARLNLV 129
Query: 154 AKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRA-RMRGNAELLIDKMRDKGYAVHSL 212
V G+ AE FF +P+ ++D VY LL +Y ++ + AE +KMRD G+
Sbjct: 130 ETVLGLEEAEKFFERIPENMRDYSVYENLLRSYTKSEKTLDKAEDTFEKMRDLGFLSKPS 189
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD 245
P++ M++LY K+ + D V+ + EM E +++D
Sbjct: 190 PFDTMISLYRKLNKRDMVKKLKYEMMENNVKID 222
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 4/200 (2%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
Y + L + +E E + E VY N+ S S+ + +K E FE M+
Sbjct: 122 YAARLNLVETVLGLEEAEKFFERIPENMRDYSVYE-NLLRSYTKSEKTLDKAEDTFEKMR 180
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D + F TM ++Y K+ + + ++ + DR +LS+ K+
Sbjct: 181 -DLGFLSKPSPFDTMISLYRKLNKRDMVKKLKYEMMENNVKIDRPIELNVLSIVSDF-KR 238
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+ + +WN Y+ + + Y IS L ++ D++G EKI+++W D + L+
Sbjct: 239 DYLDPLWNKYKKE-GKLMDDEYRIRISYLLKLDDVQGAEKIYQKWQPTGPKLDMSVPGLL 297
Query: 394 MSWYVKEGNFDKAEAFFNSI 413
+S + EGN K E NSI
Sbjct: 298 ISRFRAEGNESKVEEMVNSI 317
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 146/329 (44%), Gaps = 13/329 (3%)
Query: 109 LCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLS 168
L ++KEL K + A E++DW+ + L + + G L
Sbjct: 157 LAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLRRALE 216
Query: 169 LPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
L ++ R + Y AL+N ++ A + +M +G + + YN ++ +Y
Sbjct: 217 LVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYG 276
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
K ++E ++ ++ +GI ++ +YN + +C G ++ ++E M + P
Sbjct: 277 KTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERM-LAAGAQPTA 335
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE---EVYRV 339
TT++ + + Y K GQ+++A + + + R R+ + Y L+S G+ E E++R
Sbjct: 336 TTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFRE 395
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+ P V Y+++I++ A+ E +++FE+ D +++ Y +
Sbjct: 396 MHT-EGCRPNVVT--YNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDR 452
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
G++ +A F + +P+S + T+
Sbjct: 453 AGHWRRALTAFEQMKAHNCRPDSVVYNTI 481
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 15/257 (5%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG LLN + A L+ + D+ + Y+ ++ K K ++ SEM
Sbjct: 173 YGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMN 232
Query: 239 EKGIRLDVYSYN--IWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIK 294
+GI +V +Y+ IW Q + G F L+ + K +NPN T++ + K
Sbjct: 233 ARGIFPNVITYSTLIWGFCLAGQ-----LMGAFSLLNEMILKNINPNVYTYNILIDALCK 287
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP-GV--T 351
G+V++A++ L + + D V Y+ S+ + K + + + L+ + G+
Sbjct: 288 EGKVKEAKKLLAEMHHKGQPADVVTYN---SVLDGLCKSQNLDKATALFMKMKKWGIQPN 344
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y A+I L + G ++ +K+F+ L D R N+M+S KEG FDKA A +
Sbjct: 345 KYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKS 404
Query: 412 SIIEEGGKPNSTSWETL 428
+ + G PN+ +++ +
Sbjct: 405 KMEDNGCIPNAVTFDII 421
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
Query: 88 LGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAA 147
+G+ S+LN+ + + ++ L K + K A ++ M+++G+ + ++
Sbjct: 257 MGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSV 316
Query: 148 IQLDLIAKVHGVASAEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
LD + K + A F+ + ++ Y AL++ + NA+ L + K
Sbjct: 317 --LDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVK 374
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G + YNVM++ K +D+ +M S+M++ G + +++I + S + +K
Sbjct: 375 GCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKA 434
Query: 266 EGVFELM 272
E + M
Sbjct: 435 EKLLHGM 441
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 124/289 (42%), Gaps = 9/289 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N + A+ ++++M D+G + +N ++ +E +
Sbjct: 334 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLA 393
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KG+ DVY++NI +++ G +FE MK P+ T++ +
Sbjct: 394 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK-SSGCAPDEVTYNILIDHLCS 452
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
MG++ A + L+ +ES R V Y+ ++ + EE V++ + + +
Sbjct: 453 MGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVT 512
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR--IANLMMSWYVKEGNFDKAEAFFNS 412
++ +I L + I+ ++ E+ VK P N +++ Y K+G+ KA +
Sbjct: 513 FNTLIDGLCKAKRIDDATELIEQM--VKEGLQPSNITYNSILTHYCKQGDLKKAADILET 570
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKP 461
+ G + + ++ TL G + R AL L+G K RP P
Sbjct: 571 MTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM----RIKGIRPTP 615
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 127/270 (47%), Gaps = 10/270 (3%)
Query: 178 VYGALLNAYVRARMRGNA-ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
V + + +Y R R +A +L+ +++ G + YN ++ + + +ES+ +E
Sbjct: 126 VVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNE 185
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M ++GI+ DV + N + + + E M AV P+ TTF+T+ +I+ G
Sbjct: 186 MTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS-SHAVAPDETTFTTLMQGFIEEG 244
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TNLG 354
+E A ++ RV + L++ Y +G+ E+ + + + + G +
Sbjct: 245 SIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDA--LGYIQKEIADGFEPDQVT 302
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNS 412
Y+ + L + G + K+ + L ++ +DP + N +++ K G D+A+ N
Sbjct: 303 YNTFVHCLCQNGHVSHALKVMD--LMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQ 360
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+++ G P++T++ TL + R+ EAL
Sbjct: 361 MVDRGCLPDTTTFNTLIVALCSQNRLEEAL 390
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 136/329 (41%), Gaps = 13/329 (3%)
Query: 124 HALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGA 181
HAL+V D M G + + I + ++K + A+ + D L D +
Sbjct: 318 HALKVMDLMLQEGHDPDVFTYNTVI--NCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNT 375
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L+ A A L ++ KG + +N+++ K+ + + EMK G
Sbjct: 376 LIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG 435
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-VDKAVNPNWT-TFSTMATMYIKMGQVE 299
D +YNI + S G K+ +L+K ++ P T T++T+ K ++E
Sbjct: 436 CAPDEVTYNILIDHLCSMG---KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIE 492
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TNLGYHA 357
+AEE ++++ R V ++ L+ + ++ + + + V G+ +N+ Y++
Sbjct: 493 EAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATEL--IEQMVKEGLQPSNITYNS 550
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+++ + GD++ I E + D +++ K G A + +G
Sbjct: 551 ILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 610
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLK 446
+P ++ + + R + +ALS +
Sbjct: 611 IRPTPKAYNPVIQSLFRRNNLRDALSLFR 639
>gi|326518288|dbj|BAJ88173.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527987|dbj|BAJ89045.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 137/329 (41%), Gaps = 33/329 (10%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIA---------KVHGVASA 162
+K LR RR+ A ER L D+ + LD I + A A
Sbjct: 181 ALKSLRAARRWDEA-----------ERLALDMVDSGVPLDNITYSTLITAARRCRQFAKA 229
Query: 163 EDFFLSL--PDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
++F + P + L D Y A+L+ Y + RM+ L D+ R G+ + + V+
Sbjct: 230 VEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGSGWKPDHVAFAVLA 289
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
++ + +YD ++ + EM+E G + +++ YN L + G G +FE M + V
Sbjct: 290 KMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTGKPGLARNLFEEMTAE-GV 348
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
PN T + +A +Y + A + ++ + D + + LLS+ VG E +
Sbjct: 349 EPNARTLTAVAKIYGRARWGRDALQLWDQMREKKIPADSILCNTLLSMCADVGLVAEAEQ 408
Query: 339 VWNLYRSVFPGVTNL------GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
++ + P +T++ Y AMI+ I D + ++F E L + +
Sbjct: 409 LFEEMKD--PDLTDVPQPDKWSYTAMINIYGSIKDADRALQLFVEMLQSGIEANIMSYTI 466
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
++ K A + +E G KP+
Sbjct: 467 VIQCLGKANRIRDAVEVLEAGLERGLKPD 495
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 113/291 (38%), Gaps = 49/291 (16%)
Query: 151 DLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLI---DKMRDKGY 207
DL +H F LPD+ LLN Y+ R LL D G+
Sbjct: 120 DLAPTLHA-------FFPLPDSPPTSSDALLLLN-YLHPSWRKTLSLLAYLRGLPADAGF 171
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
AV ++ +NV + + +DE E + +M + G+ LD NI
Sbjct: 172 AVDTILFNVALKSLRAARRWDEAERLALDMVDSGVPLD----NI---------------- 211
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG--RDRVPYHYLLS 325
T+ST+ T + Q KA E R+ S + D V Y +L
Sbjct: 212 ----------------TYSTLITAARRCRQFAKAVEWFERMYSPGSAVLPDEVTYSAVLD 255
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+Y + KEEV +++ R ++ + + GD +G++ +F+E V +
Sbjct: 256 VYAQLRMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGTKP 315
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ + N ++ K G A F + EG +PN+ + +A+ + R R
Sbjct: 316 NIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTAVAKIYGRAR 366
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 15/262 (5%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ V++R A L + +G++ Y ++ +K ++ E++ +EM
Sbjct: 906 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 965
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G + + YNI L+ G+TEK+ +F+ M VD+ +NP+ +++ + K GQ
Sbjct: 966 LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM-VDQGINPDIKSYTIIIDTLCKAGQ 1024
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGY 355
+ R++ D + Y+ L+ G + EE ++N + + P + Y
Sbjct: 1025 LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT--Y 1082
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSI 413
+++I L + G K++EE L+ + P + N ++ Y G+ D A A + +
Sbjct: 1083 NSLILHLGKAGKAAEAGKMYEELLT--KGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRM 1140
Query: 414 IEEGGKPNSTSWETLAEGHIRE 435
I G PNS++ HI E
Sbjct: 1141 IVGGCLPNSSTC------HIHE 1156
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 142/356 (39%), Gaps = 5/356 (1%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L + E G + ++ L + RR+ A + M N G + + IQ+
Sbjct: 296 LLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQV-- 353
Query: 153 IAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
+ ++ A+D F + D DR Y LL+ + + + + M+ GY +
Sbjct: 354 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDN 413
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
+ Y ++ ++ E M EMK+KGI + YSYN +S +F+
Sbjct: 414 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 473
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
M + PN T Y K G+ KA + ++S+ D V + +L
Sbjct: 474 YMDI-HGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 532
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
G+ RV++ +++ + Y MI ++ + KIF + + D +
Sbjct: 533 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVV 592
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
N ++ K G D+A F + E +P ++ TL G RE ++ E + L+
Sbjct: 593 NSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 648
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 131/302 (43%), Gaps = 14/302 (4%)
Query: 142 SASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK 201
+ ++ +I+ I G+ + +DFFL L+ + + A L+ K
Sbjct: 778 AGTEKSIEFAEIIASSGI-TLDDFFLC------------PLIKHLCKQKKALEAHELVKK 824
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
+ G ++ + YN ++ + D E + +EMKE G D ++YN+ L + G
Sbjct: 825 FKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMR 884
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
E+M V E M K + T++T+ + +K ++E+A + + S+ Y
Sbjct: 885 IEEMLKVQEEMH-RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYG 943
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
LL G+ E+ ++N Y+ +++ G+ E + +F++ +
Sbjct: 944 PLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ 1003
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ D + +++ K G + +F ++E G +P+ ++ L +G + +R+ EA
Sbjct: 1004 GINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEA 1063
Query: 442 LS 443
+S
Sbjct: 1064 VS 1065
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 135/346 (39%), Gaps = 49/346 (14%)
Query: 124 HALEVYDWMNNRGERFRLSA---------SDAAIQLDLIAKVHGVASAEDFFLSLPDTLK 174
HAL D ERFR +A + LDL+ V + F + +
Sbjct: 141 HALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIV 200
Query: 175 DRRV--YGALLNAY-VRARMRGNAELLIDKMRDKGYAVHSLPYN---------------- 215
V + A+ V +R +A + + M++ G +++ YN
Sbjct: 201 KANVGTFAAIFGGLGVEGGLR-SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 259
Query: 216 -------------------VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
V+M + K ++ + V ++ EM+ G++ +VYSY I +
Sbjct: 260 EVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVL 319
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
G ++ + M+ ++ P+ T + + + G++ A++ +++ D
Sbjct: 320 GQARRFDEAYRILAEME-NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 378
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
RV Y LL + G+ + V +WN ++ + Y A+I +L ++G + ++F+
Sbjct: 379 RVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 438
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
E + N ++S ++K F A F + G KPN
Sbjct: 439 EMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNG 484
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 109/253 (43%), Gaps = 7/253 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+ V + AE L +M++ G YN+++ K +E+ + EM
Sbjct: 837 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 896
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG +YN +S S+ + ++ + LM + +P T+ + +K G+
Sbjct: 897 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS--QGFSPTPCTYGPLLDGLLKAGR 954
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+E AE + + Y+ LL+ + G E+V ++ + + + P + + Y
Sbjct: 955 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS--Y 1012
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I +L + G + F + L + D NL++ K ++A + FN + +
Sbjct: 1013 TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQK 1072
Query: 416 EGGKPNSTSWETL 428
+G PN ++ +L
Sbjct: 1073 KGIVPNLYTYNSL 1085
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 87/208 (41%), Gaps = 5/208 (2%)
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
MKE GI L+ Y+YN + G + V+++M VD V P+ T+S + + K
Sbjct: 230 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVV-PSVRTYSVLMVAFGKRR 288
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
VE LR +E+ + Y + + G + +E YR+ + + +
Sbjct: 289 DVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHT 348
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDP-RIANL-MMSWYVKEGNFDKAEAFFNSII 414
+I L G I + +F W KS P R+ + ++ + G +N++
Sbjct: 349 VLIQVLCDAGRISDAKDVF--WKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMK 406
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEAL 442
+G N ++ + + + R+ EAL
Sbjct: 407 ADGYNDNVVAYTAVIDALCQVGRVFEAL 434
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 98/246 (39%), Gaps = 3/246 (1%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+++M Y + + YN ++ K ++ M+ M KG D+ SYN +
Sbjct: 646 LLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV 705
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR-D 316
+ + +F MK K + P++ T T+ ++K+G +++A ++ + + D
Sbjct: 706 KEERYNEAFSIFCQMK--KVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTD 763
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
R H L+ E+ + S + + +I L + ++ +
Sbjct: 764 RSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVK 823
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
++ S S N ++ V E D AE F + E G P+ ++ L + +
Sbjct: 824 KFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSM 883
Query: 437 RILEAL 442
RI E L
Sbjct: 884 RIEEML 889
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K RR + A+++Y + ++G F + LD + K + AE+ F + +
Sbjct: 910 IISGLVKSRRLEQAIDLYYNLMSQG--FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 967
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAE----------------------LLID------- 200
+ +Y LLN + R+ GN E ++ID
Sbjct: 968 YGCKANCTIYNILLNGH---RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQ 1024
Query: 201 ---------KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNI 251
++ + G + YN+++ K K +E S+ +EM++KGI ++Y+YN
Sbjct: 1025 LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNS 1084
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
+ G G + ++E + + K PN T++ + Y G + A + R+
Sbjct: 1085 LILHLGKAGKAAEAGKMYEEL-LTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRM 1140
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 132/329 (40%), Gaps = 25/329 (7%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PDTLKDRRV 178
A++ Y+ M ++G + A +A L +AK + A+ F L PDT+
Sbjct: 503 AIQRYELMKSKGIVPDVVAGNAV--LFGLAKSGRLGMAKRVFHELKAMGVSPDTI----T 556
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++ +A A + M + L N ++ K DE + ++K
Sbjct: 557 YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLK 616
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E + +YN L+ G +G +++ + E M PN T++T+ K G V
Sbjct: 617 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM-YHSNYPPNLITYNTILDCLCKNGAV 675
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR-----VWNLYRSVFPGVTNL 353
A + L + ++ D Y+ + +YG V KEE Y + + + P L
Sbjct: 676 NDALDMLYSMTTKGCIPDLSSYNTV--IYGLV--KEERYNEAFSIFCQMKKVLIPDYATL 731
Query: 354 GYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
++ S +IG + E + I E +L S D + +M +K+ +K+ F
Sbjct: 732 --CTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEI 789
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
I G + L + ++++ LEA
Sbjct: 790 IASSGITLDDFFLCPLIKHLCKQKKALEA 818
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 115/265 (43%), Gaps = 5/265 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ + A ++D+M G + Y ++ Y++ Y+ ++ M
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G+ D++ YN + E+ + + M +K + PN T+ +Y K G++
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMG-EKGIKPNAHTYGAFINLYSKSGEI 572
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
+ AE + + S + V Y L+ + VG E + L + + P + Y
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR--AYS 630
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
A+I SL++ G + +F ++L D + N ++S + KEG+ +KA ++ ++
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
G PN + TL G + + +A
Sbjct: 691 GINPNIVVYNTLINGLCKLGEVTKA 715
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 131/299 (43%), Gaps = 6/299 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L+N + A L D++ +K + Y+ ++ Y K E + EM
Sbjct: 698 VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KGI D Y Y I + CG +G+ EK +F + K+V + + F+++ + K G+
Sbjct: 758 ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQ-QKSVG-SLSAFNSLIDSFCKHGK 815
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW--NLYRSVFPGVTNLGY 355
V +A E + + + V Y L+ YG EE +++ R++ P L Y
Sbjct: 816 VIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP--NTLTY 873
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++ S +IG+ M +F++ + + D +M S Y KEG +A N +
Sbjct: 874 TSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 933
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEE 474
EG K ++ L +E++I L L E + S + ++ F+K+ E+
Sbjct: 934 EGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNED 992
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 122/267 (45%), Gaps = 5/267 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+YG L+ AYV+ A L+ M G YN ++ + K+ +E + ++ +M
Sbjct: 488 MYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM 547
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
EKGI+ + ++Y +++ G + E F+ M + + PN ++ + + +G
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM-LSSGIVPNNVIYTILIKGHCDVGN 606
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW--NLYRSVFPGVTNLGY 355
+A + + + + D Y ++ GK +E V+ L V P V Y
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV--FLY 664
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++IS + GDIE ++++E L + + + N +++ K G KA F+ I E
Sbjct: 665 NSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEE 724
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
+ P+ ++ T+ +G+ + + EA
Sbjct: 725 KDLVPDVVTYSTIIDGYCKSGNLTEAF 751
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 5/274 (1%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y L+ RA+ A++L+ M +KG ++ Y + LY K E E
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAE 576
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+M GI + Y I + G+T + F+ M ++K + P+ +S +
Sbjct: 577 RYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCM-LEKGLIPDIRAYSAIIHS 635
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
K G+ ++A + D Y+ L+S + G E+ ++++ L+ + P
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ + Y+ +I+ L ++G++ ++F+E D + ++ Y K GN +A
Sbjct: 696 I--VVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKL 753
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
F+ +I +G P+ + L +G +E + +ALS
Sbjct: 754 FDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 9/290 (3%)
Query: 162 AEDFFLSLPDTL--KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
A+ F S+P + +R Y AL++ +++ A + D+M +G ++ + YN M+
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
K E + S+ +EM G+ D ++YN+ + K + MK K +
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK-LT 448
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE---EV 336
P+ T+S + + ++KA E L ++ + Y L+ Y + E E+
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508
Query: 337 YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
++ + V P + Y+ +I L R +E + + + + ++
Sbjct: 509 LKIM-IANGVLPDL--FCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINL 565
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
Y K G AE +F ++ G PN+ + L +GH +EALS K
Sbjct: 566 YSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFK 615
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 106/236 (44%), Gaps = 7/236 (2%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN + + DE + M EKG+ D ++Y + + Q +++ + +FE M
Sbjct: 279 YNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMP 338
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+NPN T++ + +IK G + EE+LR + IT ++ ++ G + K
Sbjct: 339 -SSGLNPNRFTYTALIDGFIKEGNI---EEALRIKDEMITRGLKLNVVTYNAMIGGIAKA 394
Query: 334 EEVYRVWNLYRSVF-PGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
E+ + +L+ + G+ Y+ +I + D+ ++ E + K + P
Sbjct: 395 GEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY 454
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++++S + KA + +I G KPN + TL + +++E R A+ LK
Sbjct: 455 SVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 118/266 (44%), Gaps = 5/266 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y A++ +A A L ++M G + YN+++ Y+K + + +++EMK
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ + ++Y++ +S +K V + M + V PN + T+ Y++ +
Sbjct: 444 ARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM-IRNGVKPNVFMYGTLIKAYVQESRY 502
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPGVTNLGYH 356
E A E L+ + + D Y+ L+ K EE + V + + P Y
Sbjct: 503 EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT--YG 560
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
A I+ ++ G+I+ E+ F++ LS + I +++ + GN +A + F ++E+
Sbjct: 561 AFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK 620
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G P+ ++ + + + EA+
Sbjct: 621 GLIPDIRAYSAIIHSLSKNGKTKEAM 646
>gi|242094172|ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
gi|241915799|gb|EER88943.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
Length = 429
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 127/280 (45%), Gaps = 15/280 (5%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
++RR Y LL AY RA ++ ++ +MR +G + + Y++++ LY + + +
Sbjct: 78 RNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAGYSMLVRLYRDNGMWKKAIDL 137
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
V EM+E G+ LDV Y+ + + G G VF+ M+ + + P+ +T++ + +
Sbjct: 138 VMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAE-GIKPDISTWNALIQWHC 196
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
++G +++A ++ D + ++S G GK W+ + +F G+ N
Sbjct: 197 RVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGK-------WDEIKKLFDGMKNR 249
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSS-------YDPRIANLMMSWYVKEGNFDKA 406
G+ + A + DI G F + ++ PR+ ++ + Y ++G ++
Sbjct: 250 GFKESGAVYAVLVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLANAYAQQGLCEQT 309
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ EEG +PN L R LEAL+ +
Sbjct: 310 VNVLQLMEEEGFEPNLVMLNLLINAFGTAGRHLEALAVFQ 349
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 121/276 (43%), Gaps = 12/276 (4%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ A RA AE L+ +MR G + YN ++ + + ++ +M
Sbjct: 12 AYARLIRALSRAGRALEAEALLLEMRRHGPRPDAAHYNALLEGLLAAAHLRLADRLLLQM 71
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G+ + +Y + L + G E V M+ + + + +S + +Y G
Sbjct: 72 ADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMR-RRGIRLDTAGYSMLVRLYRDNGM 130
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGY 355
+KA + + ++ D Y L+ +G G+ + RV++ R+ + P ++ +
Sbjct: 131 WKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEGIKPDIST--W 188
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+A+I R+G+++ + F DP+I +++S ++G +D+ + F+ +
Sbjct: 189 NALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMKN 248
Query: 416 EGGKPNSTSWETLAE-----GHIRERRILEALSCLK 446
G K + + L + GH R+ R E ++ L+
Sbjct: 249 RGFKESGAVYAVLVDIYGQYGHFRDAR--ECIAALR 282
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 148/338 (43%), Gaps = 4/338 (1%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+++EL A+ Y++ R R A+ + + + V A+ F +
Sbjct: 202 IIRELGNRGECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFS 261
Query: 172 TLKDRRVYG--ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYD 228
VY AL++AY R+ + A + + M++ G + + YN ++ K E+
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+V EM+ ++ D ++N L+ C G E +F+ M ++ + + +++T+
Sbjct: 322 QVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMS-NRRIEQDVFSYNTL 380
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
K GQ++ A E L ++ ++ + V Y ++ + G+ +E ++ R +
Sbjct: 381 LDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNI 440
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ + Y+ ++S ++G E I E SV D N ++ Y K+G +D+ +
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
F + E PN ++ TL +G+ + EA+ +
Sbjct: 501 VFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFR 538
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/278 (18%), Positives = 110/278 (39%), Gaps = 39/278 (14%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
KD Y ALL Y + + + +M+ + + L Y+ ++ Y K Y E +
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEV 536
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
E K G+R DV Y+ + + G + + M + ++PN T++++ +
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM-TKEGISPNVVTYNSIIDAFG 595
Query: 294 KMGQVEKAEE-----SLRRVESRITGRDRVPYHYLLSLYGSVGKK-------------EE 335
+ +E++ + SL S ++ + ++ L+G + + +E
Sbjct: 596 RSATMERSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQE 655
Query: 336 VYRVWNLYRS-----VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
+ + ++R + P V + A++++ +R E + EE + +
Sbjct: 656 LSCILEVFRKMHQLEIKPNVVT--FSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVH 713
Query: 391 NLMMS-----WYVKEGNFDK--------AEAFFNSIIE 415
L+M W + FDK A AF+N++ +
Sbjct: 714 GLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTD 751
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR Y LL+ Y + A ++ +M G + YN ++ Y K +YDEV+ +
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EMK + + ++ +Y+ + G ++ VF K + + +S + K
Sbjct: 503 AEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFK-SAGLRADVVLYSALIDALCK 561
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
G V A + + + V Y+ ++ +G
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 132/302 (43%), Gaps = 17/302 (5%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
+D RV +LLN Y + +A + + Y + YN M+ LY + +E +
Sbjct: 216 RDPRVQNSLLNMYGKCEDLPSARQVFSGI----YRRDVVSYNTMLGLYAQKAYVEECIGL 271
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+M +GI D +Y L + + ++ + + +L V++ +N + + +ATM++
Sbjct: 272 FGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKL-AVNEGLNSDIRVGTALATMFV 330
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+ G V A+++L RD V Y+ L++ G EE + + RS +
Sbjct: 331 RCGDVAGAKQALE----AFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRT 386
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +++++ + + E I V S D +I N ++S Y + G+ +A FN++
Sbjct: 387 TYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTM 446
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEE 473
K + SW + G+ R EA+ K +EG K P V ++ AC
Sbjct: 447 ----PKRDLISWNAIIAGYARREDRGEAMKLYK-QMQSEGVK---PGRVTFLHLLSACTN 498
Query: 474 ES 475
S
Sbjct: 499 SS 500
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 103/229 (44%), Gaps = 11/229 (4%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M++ G+ ++ ++ M DE + +++ + G LD N +S+ G
Sbjct: 678 QMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSG 737
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
S VF DK N + +++ M Y + G A + +++ + ++ +
Sbjct: 738 SMTDARKVF-----DKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSF 792
Query: 321 HYLLSLYGSVGKKEEVYRVW-NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
+L+ S EE RV + + G +G A+IS A+ G +E +++F+ +
Sbjct: 793 VSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGA-ALISMYAKCGSLEEAQEVFDNF- 850
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ + N M++ Y + G KA FFN + +EG KP+ +++ ++
Sbjct: 851 ---TEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSI 896
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 15/212 (7%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
T +R Y L+ R R A+ + +M + G N+++ +Y+K + +
Sbjct: 78 TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ +M R DV S+N +S QG +K +FE M+ + P+ T+ ++ T
Sbjct: 138 QVFLKMP----RRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFI-PSKITYISILTA 192
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
++E ++ ++ RD + LL++Y GK E++ R VF G+
Sbjct: 193 CCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMY---GKCEDLPSA----RQVFSGIY 245
Query: 352 N---LGYHAMISSLARIGDIEGMEKIFEEWLS 380
+ Y+ M+ A+ +E +F + S
Sbjct: 246 RRDVVSYNTMLGLYAQKAYVEECIGLFGQMSS 277
>gi|357444885|ref|XP_003592720.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481768|gb|AES62971.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 553
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 167/375 (44%), Gaps = 29/375 (7%)
Query: 78 RKLSLMDNPQLGSA-SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRG 136
R + L+D + GSA SVLN + +++ K + + ++ +++ E+ +W+ +
Sbjct: 77 RLMKLID--ETGSAVSVLNSEKMKNQTIPKALVVGTLMRFKQLKKWNLVAEILEWLRAQN 134
Query: 137 -------ERFRLSASDAAI-QLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVR 188
+ F L + + + KV G+ + + P+ + AL+ AY +
Sbjct: 135 WWDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGY---APNVVSQT----ALMEAYGK 187
Query: 189 ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM---KIKEYDEVESMVSEMKEKGIRLD 245
NAE + +M+ G + Y +++ ++ K KE +EV + ++ +R D
Sbjct: 188 GGRYNNAEAIFRRMQTFGPEPSAFTYQIILKTFVQGNKFKEAEEVFDKLLNDEKSPLRPD 247
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
+N+ + GS EK F LM ++ + T++++ + +V + +
Sbjct: 248 QKMFNMMIYMYKKSGSHEKARQTFALM-AERGIKKATVTYNSLMSFETNYKEVSNIYDQM 306
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLA 363
+R + R D V Y L++ YG ++EE V+ L V P T Y+ ++ + +
Sbjct: 307 QRADLR---PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP--TRKAYNILLDAFS 361
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
G +E +F+ K D M+S YV + + AE FF +I++G +PN
Sbjct: 362 ISGMVEQARIVFKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDGFEPNVV 421
Query: 424 SWETLAEGHIRERRI 438
++ TL +G+ + I
Sbjct: 422 TYGTLIKGYAKANDI 436
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 128/270 (47%), Gaps = 9/270 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+YG ++N + A L+ M ++ Y++++ + K D S+++EM
Sbjct: 180 MYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEM 239
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K+K I D+++Y+ + + E + +F L + + PN TF+++ K G+
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLF-LEMIHLNIYPNVCTFNSVIDGLCKEGK 298
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
VE AEE +R + + D + Y+ ++ YG G+ + +++ + +S+ P + + Y
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNI--ISY 356
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSI 413
+ +I+ AR I+ ++ E + P I N+++ + G A+ FF+ +
Sbjct: 357 NILINGYARQKKIDEAMQVCREI--SQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEM 414
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ G P+ + TL G+ + + EA+S
Sbjct: 415 LSAGHIPDLYTHCTLLGGYFKNGLVEEAMS 444
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 112/243 (46%), Gaps = 10/243 (4%)
Query: 205 KGYAVHSLPYNVMM-TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
KG + + +N ++ L+ + K D V ++E + Y ++ +G T+
Sbjct: 136 KGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQ 195
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
K + LM+ + PN +S + + K G ++ A L ++ + D Y L
Sbjct: 196 KAFDLLRLME-QGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTL 254
Query: 324 LSLYGSVGKKEEVYRVW--NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+ + + E V ++ ++ +++P V ++++I L + G +E E+I +
Sbjct: 255 IDALCKLSQWENVRTLFLEMIHLNIYPNVCT--FNSVIDGLCKEGKVEDAEEIMRYM--I 310
Query: 382 KSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+ DP + N+++ Y G D+A F+S+I + +PN S+ L G+ R+++I
Sbjct: 311 EKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKID 370
Query: 440 EAL 442
EA+
Sbjct: 371 EAM 373
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 109/272 (40%), Gaps = 42/272 (15%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y +++ Y A + D M +K + + YN+++ Y + K+ DE
Sbjct: 316 PDVI----TYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDE 371
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ E+ +KG++ + + N+ L G T+ + F+ M + P+ T T+
Sbjct: 372 AMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHI-PDLYTHCTLL 430
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
Y K G VE+A ++E R +E+
Sbjct: 431 GGYFKNGLVEEAMSHFHKLERR---------------------RED-------------- 455
Query: 350 VTNLG-YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
TN+ Y A+I L + G ++ FE+ + D M+S Y +EG D+A+
Sbjct: 456 -TNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKD 514
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ + G ++ ++ + G +R ++ E
Sbjct: 515 MLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 116/268 (43%), Gaps = 3/268 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++A + N L +M + +N ++ K + ++ E ++
Sbjct: 247 DIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIM 306
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M EKG+ DV +YN+ + G +G ++ +F+ M ++K++ PN +++ + Y +
Sbjct: 307 RYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM-INKSIEPNIISYNILINGYAR 365
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++++A + R + + V + LL +G+ + ++ S + +L
Sbjct: 366 QKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSA-GHIPDLY 424
Query: 355 YHA-MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
H ++ + G +E F + + + +I ++ K G DKA A F +
Sbjct: 425 THCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKL 484
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
G P+ ++ + G+ +E + EA
Sbjct: 485 PLIGLHPDVITYTAMISGYCQEGLLDEA 512
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 145/349 (41%), Gaps = 19/349 (5%)
Query: 97 WEKGGRSLTKWELCRVVKELRKFR----------RYKHALEVYDWMNNRGERFRLSASDA 146
W+K + C V ++R F + AL Y M RG R
Sbjct: 245 WDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEM--RGRRVTPDVVSF 302
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRD 204
+ + L + + A ++ + + + D +Y ++ + RA + A + D+M
Sbjct: 303 SCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVA 362
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
G + YN ++ K + + E +++EMKE+G+ D+ ++ + G+ EK
Sbjct: 363 FGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEK 422
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
F+ + D+ + P+ T++T+ + G + KA E + SR + V Y L+
Sbjct: 423 ALQFFDTIS-DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILI 481
Query: 325 SLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ G+ + + + + + + P + + Y+++I R G++ ++ + K
Sbjct: 482 DSHCEKGQVDNAFAFLDEMVNKGIVPNI--MTYNSIIKGYCRSGNVSKGQQFLPKMRHDK 539
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
D N ++ YVKEG +A + E +P++ ++ + G
Sbjct: 540 VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISG 588
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 9/258 (3%)
Query: 184 NAYVRARMRGN----AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
N V AR R A LID M KG + YN ++ ++ +D+ + M
Sbjct: 198 NVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDA 257
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
G+ DV S+N+ + G E+ ++ M+ + V P+ +FS + ++ + G+++
Sbjct: 258 CGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMR-GRRVTPDVVSFSCLIGLFTRRGEMD 316
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
A E LR + D V Y ++ + G E RV + + P V Y+
Sbjct: 317 HAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVT--YNT 374
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+++ L + + E++ E D ++ Y ++GN +KA FF++I ++
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR 434
Query: 418 GKPNSTSWETLAEGHIRE 435
+P+ ++ TL +G R+
Sbjct: 435 LRPDIVTYNTLIDGMCRQ 452
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 113/235 (48%), Gaps = 5/235 (2%)
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
V++ N+M+ Y K ++ EV++++SEM+++ + DV ++N+ + + G E +
Sbjct: 157 VNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMAL 216
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
+ M V K + P T++++ ++ G+ +KA E R +++ D ++ L+ +
Sbjct: 217 IDSM-VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275
Query: 329 SVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
G+ EE R + R V P V + + +I R G+++ + E D
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVS--FSCLIGLFTRRGEMDHAAEYLREMREFGLMPD 333
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
I +++ + + G +A + ++ G P+ ++ TL G +ERR+ +A
Sbjct: 334 GVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDA 388
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 124/283 (43%), Gaps = 13/283 (4%)
Query: 173 LKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
++ RRV + L+ + R +A + +MR+ G + Y +++ + +
Sbjct: 290 MRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGL 349
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
E + EM G DV +YN L+ + E + MK ++ V P+ TF+
Sbjct: 350 MLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMK-ERGVPPDLCTFT 408
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL---LSLYGSVGKKEEVYRVWNLY 343
T+ Y + G +EKA + + + D V Y+ L + G +GK E++ +
Sbjct: 409 TLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMH-S 467
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
R +FP ++ Y +I S G ++ +E ++ + N ++ Y + GN
Sbjct: 468 REIFP--NHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNV 525
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
K + F + + P+ ++ TL G+++E ++ EA + LK
Sbjct: 526 SKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLK 568
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ Y R+ + + KMR + YN ++ Y+K + E +++ M
Sbjct: 511 TYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIM 570
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ + ++ D +YN+ +S G+ ++ + V++ M + + P+ T+ +M ++ G
Sbjct: 571 ENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGA-RGIEPDRYTYMSMINGHVVAGN 629
Query: 298 VEKA 301
+K+
Sbjct: 630 SKKS 633
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 14/289 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+ A +R L +M++ GYAV+ + ++ ++ + D S++ EMK
Sbjct: 203 YTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMK 262
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ DV YN+ + G G + F MK + V + T+++M + K ++
Sbjct: 263 SNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDD-VTYTSMIGVLCKADRL 321
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYH 356
+A E ++ Y+ ++ YG GK E+ Y + R P V + Y+
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVS--YN 379
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
++S L R G ++ K FEE +K P ++ N+M+ K G + A +++
Sbjct: 380 CILSCLGRKGQVDEALKKFEE---MKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMK 436
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVN 463
+ G PN + + + + +R+ +A S +G K+ RP V
Sbjct: 437 DAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL----DHKTCRPDAVT 481
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 140/337 (41%), Gaps = 5/337 (1%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSL 169
++ L K + + AL V D M + G + I +D + K + A F L
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAG--LFPNVITVNIMVDRLCKAQRLDDACSIFEGLDH 472
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D Y +L+ R A L ++M D +++ Y ++ + K ++
Sbjct: 473 KTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKED 532
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ +EM G D+ N ++ G EK +F+ +K + P+ +++ +
Sbjct: 533 GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK-NLGFIPDARSYTILI 591
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+K G +A E ++ + D Y+ ++ + GK + Y++ ++
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE 651
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
T + Y ++I LA+I ++ +FEE S + I + ++ + K G D+A
Sbjct: 652 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLI 711
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++++G PN +W L + ++ I EAL C +
Sbjct: 712 MEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 117/266 (43%), Gaps = 9/266 (3%)
Query: 182 LLNAYVRARMRGN----AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
LLN Y+ + L ++++ G+ + Y +++ +K E + M
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KE+G LD +YN + G K + E MK K P T+ ++ K+ +
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT-KGHEPTVVTYGSVIDGLAKIDR 669
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+++A +S+ + V Y L+ +G VG+ +E Y + + + + P V +
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT--W 727
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ ++ +L + +I F+ +K + + ++++ K F+KA F+ + +
Sbjct: 728 NCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK 787
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
+G KPN ++ T+ G + I+EA
Sbjct: 788 QGFKPNVFTYTTMISGLAKAGNIVEA 813
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 115/279 (41%), Gaps = 17/279 (6%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D + + Y +++ +A A ++ D M+D G + + N+M+ K + D+
Sbjct: 404 DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDA 463
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
S+ + K R D +Y + G G ++ ++E M +D PN ++++
Sbjct: 464 CSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM-LDANQIPNAVVYTSLIR 522
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY-GSVGKKEEVYRVWNLYRSVFPG 349
+ K G+ E ++ + + P LL+ Y V K E+ + R++F
Sbjct: 523 NFFKCGRKEDG----HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEK----GRALFQE 574
Query: 350 VTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ NLG Y +I L + G ++F D R N ++ + K G
Sbjct: 575 IKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGK 634
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+KA + +G +P ++ ++ +G + R+ EA
Sbjct: 635 VNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 140/336 (41%), Gaps = 11/336 (3%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKV--HG-VASAEDFFLS 168
+V L K +R A +++ ++++ R DA LI + HG V A +
Sbjct: 450 MVDRLCKAQRLDDACSIFEGLDHKTCR-----PDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504
Query: 169 LPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ D + + VY +L+ + + + + + ++M G + L N M K E
Sbjct: 505 MLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
++ ++ E+K G D SY I + G + +F MK ++ + ++
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK-EQGCVLDTRAYN 623
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
T+ + K G+V KA + L ++++ V Y ++ + + +E Y ++ +S
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
+ + Y ++I ++G I+ I EE + + + N ++ VK +A
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F S+ + PN ++ L G + R+ +A
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 13/275 (4%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D R Y L++ V+A A L M+++G + + YN ++ + K + ++
Sbjct: 581 IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
++ EMK KG V +Y + ++ +FE K K + N +S++ +
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK-SKGIELNVVIYSSLIDGF 699
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV--FPGV 350
K+G++++A + + + + ++ LL ++ K EE+ ++S+
Sbjct: 700 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD---ALVKAEEISEALVCFQSMKDLKCT 756
Query: 351 TN-LGYHAMISSLARIGDIEGMEKIFEEWLSV-KSSYDPRIAN--LMMSWYVKEGNFDKA 406
N + Y +I L +I K F W + K + P + M+S K GN +A
Sbjct: 757 PNYITYSILIHGLCKI---RKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEA 813
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ F E+GG +S + + EG R +A
Sbjct: 814 DTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDA 848
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/197 (17%), Positives = 83/197 (42%), Gaps = 34/197 (17%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG++++ + A +L ++ + KG ++ + Y+ ++ + K+ DE ++ E+
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715
Query: 238 KEKGIRLDVYSYNIWLSS---------------------CGSQGSTEKM--EGVFELMKV 274
+KG+ +VY++N L + C T + G+ ++ K
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775
Query: 275 DKAV-----------NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+KA PN T++TM + K G + +A+ + + + D Y+ +
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAI 835
Query: 324 LSLYGSVGKKEEVYRVW 340
+ + + + YR++
Sbjct: 836 IEGLSNANRASDAYRLF 852
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V+ L K R A +++ ++G + I LI V ++ +L + +
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIEL-----NVVIYSSLIDGFGKVGRIDEAYLIMEE 714
Query: 172 TLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
++ + + LL+A V+A A + M+D + + Y++++ KI++
Sbjct: 715 LMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRK 774
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+++ EM+++G + +V++Y +S G+ + + +FE K
Sbjct: 775 FNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 127/276 (46%), Gaps = 11/276 (3%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+T D R Y +++A + A L+++M+ K + YN ++ K+ ++++V
Sbjct: 198 NTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKV 257
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++++SEM I +V++++I + +G E + V M ++K V P+ T+S +
Sbjct: 258 KTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHM-IEKGVEPDIITYSAIMD 316
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RS 345
Y GQV++A + + + Y L++ Y KK+ + + L+ +
Sbjct: 317 GYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGY---CKKKNLAKAMQLFGEISQKG 373
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ P Y ++ L +G I +KIF+E L V + D + + ++ Y K G ++
Sbjct: 374 LKPDTVT--YSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEE 431
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A F+ + N + + + G + R+ EA
Sbjct: 432 AMLLFSKLERNREDTNISFYTVVINGLCKNDRVREA 467
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 130/271 (47%), Gaps = 7/271 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ L++ + +A+ ++ M +KG + Y+ +M Y + D + + ++
Sbjct: 276 FSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLR 335
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+KGI+ +++SY+I ++ C + + M+ E+ + K + P+ T+ST+ I++G+
Sbjct: 336 DKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQ--KGLKPDTVTYSTILHGLIEVGR 393
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLG-Y 355
+ A++ + D + LL Y G EE +++ L R+ TN+ Y
Sbjct: 394 IGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERN--REDTNISFY 451
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I+ L + + IFE+ S+ D R N+M++ + +EG FD+ + + +
Sbjct: 452 TVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMED 511
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G N+ ++ + +G R +I E +S +K
Sbjct: 512 NGCPANNITYNVIMQGFFRSNKISEIVSFMK 542
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 120/328 (36%), Gaps = 42/328 (12%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L +MR G + N++ Y D S++ + GI +V ++N L
Sbjct: 84 LFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLF 143
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
++ +F+ + +K PN + T+ K G EK LR +E T D
Sbjct: 144 AENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDV 203
Query: 318 VPYHYLL-------------SLYGSVGKKEEVYRVWNLYRSVFPGVTNLG---------- 354
Y ++ +L + +K ++ Y S+ G+ LG
Sbjct: 204 RTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFT-YNSLIDGLCKLGQWEKVKTLLS 262
Query: 355 -------------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ +I L + G +E +++ + D + +M Y G
Sbjct: 263 EMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRG 322
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKP 461
D+A FN + ++G KPN S+ L G+ +++ + +A+ F K +P
Sbjct: 323 QVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQ----LFGEISQKGLKPDT 378
Query: 462 VNVINFFKACEEESDMG-SKEAFVALLR 488
V E +G +K+ F +LR
Sbjct: 379 VTYSTILHGLIEVGRIGDAKKIFDEMLR 406
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 159 VASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
V A F LP + D R Y ++ + R + + ++ KM D G +++ YNV
Sbjct: 464 VREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNV 523
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
+M + + + E+ S + EM +G D + + ++
Sbjct: 524 IMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561
>gi|449525162|ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73710-like [Cucumis sativus]
Length = 1026
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 126/282 (44%), Gaps = 10/282 (3%)
Query: 162 AEDFFL---SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
AE FL L D Y ++ AY +A + A LL M+++G YN ++
Sbjct: 514 AESIFLWKRDLAGKKXDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTYNSLI 573
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
++ DE +++EM+ G + +++ ++S G V+++M V V
Sbjct: 574 QMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMM-VHADV 632
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
PN + + + ++GQ E+A + R +E +++ L+ + VG E+ R
Sbjct: 633 EPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLEDARR 692
Query: 339 VWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
++N +++ G + ++MI+ A +G + +++FE+ L + D M+ Y
Sbjct: 693 IYNRMKNMEDGADTIASNSMINLYADLGMVSEAKQVFED-LRERGYADGVSFATMIYLYK 751
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE-----GHIRE 435
G D+A + E G ++TS+ + E G +RE
Sbjct: 752 NIGMLDEAIEVAEEMKESGLLRDATSFRKVIECYAINGQVRE 793
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 39/255 (15%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +++N Y M A+ + + +R++GYA + + M+ LY I DE +
Sbjct: 705 DTIASNSMINLYADLGMVSEAKQVFEDLRERGYA-DGVSFATMIYLYKNIGMLDEAIEVA 763
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EMKE G+ D S+ + G + + M V + + P+ TF+ + T+ +K
Sbjct: 764 EEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEM-VTRKLLPDNRTFNVLFTI-LK 821
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G + E++ ++ES +H +E+ Y + +VF G LG
Sbjct: 822 KGVIPL--EAVSQLES--------AFH-----------EEKTYARQAIIAAVFSG---LG 857
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
HA S+L + +L + D N+ + Y DKA F +
Sbjct: 858 LHA--SALESC----------DTFLKAEVQLDSFAYNVAIYAYGAAEKIDKALNIFMKMK 905
Query: 415 EEGGKPNSTSWETLA 429
++ KP+ ++ L
Sbjct: 906 DQNLKPDLVTYINLV 920
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 14/289 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+ A +R L +M++ GYAV+ + ++ ++ + D S++ EMK
Sbjct: 203 YTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMK 262
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ DV YN+ + G G + F MK + V + T+++M + K ++
Sbjct: 263 SNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDD-VTYTSMIGVLCKADRL 321
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYH 356
+A E ++ Y+ ++ YG GK E+ Y + R P V + Y+
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVS--YN 379
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
++S L R G ++ K FEE +K P ++ N+M+ K G + A +++
Sbjct: 380 CILSCLGRKGQVDEALKKFEE---MKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMK 436
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVN 463
+ G PN + + + + +R+ +A S +G K+ RP V
Sbjct: 437 DAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL----DHKTCRPDAVT 481
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 140/337 (41%), Gaps = 5/337 (1%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSL 169
++ L K + + AL V D M + G + I +D + K + A F L
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAG--LFPNVITVNIMVDRLCKAQRLDDACSIFEGLDH 472
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D Y +L+ R A L ++M D +++ Y ++ + K ++
Sbjct: 473 KTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKED 532
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ +EM G D+ N ++ G EK +F+ +K + P+ +++ +
Sbjct: 533 GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK-NLGFIPDARSYTILI 591
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+K G +A E ++ + D Y+ ++ + GK + Y++ ++
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE 651
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
T + Y ++I LA+I ++ +FEE S + I + ++ + K G D+A
Sbjct: 652 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLI 711
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++++G PN +W L + ++ I EAL C +
Sbjct: 712 MEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 117/266 (43%), Gaps = 9/266 (3%)
Query: 182 LLNAYVRARMRGN----AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
LLN Y+ + L ++++ G+ + Y +++ +K E + M
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KE+G LD +YN + G K + E MK K P T+ ++ K+ +
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT-KGHEPTVVTYGSVIDGLAKIDR 669
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+++A +S+ + V Y L+ +G VG+ +E Y + + + + P V +
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT--W 727
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ ++ +L + +I F+ +K + + ++++ K F+KA F+ + +
Sbjct: 728 NCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK 787
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
+G KPN ++ T+ G + I+EA
Sbjct: 788 QGFKPNVFTYTTMISGLAKAGNIVEA 813
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 115/279 (41%), Gaps = 17/279 (6%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D + + Y +++ +A A ++ D M+D G + + N+M+ K + D+
Sbjct: 404 DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDA 463
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
S+ + K R D +Y + G G ++ ++E M +D PN ++++
Sbjct: 464 CSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM-LDANQIPNAVVYTSLIR 522
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY-GSVGKKEEVYRVWNLYRSVFPG 349
+ K G+ E ++ + + P LL+ Y V K E+ + R++F
Sbjct: 523 NFFKCGRKEDG----HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEK----GRALFQE 574
Query: 350 VTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ NLG Y +I L + G ++F D R N ++ + K G
Sbjct: 575 IKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGK 634
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+KA + +G +P ++ ++ +G + R+ EA
Sbjct: 635 VNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 140/336 (41%), Gaps = 11/336 (3%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKV--HG-VASAEDFFLS 168
+V L K +R A +++ ++++ R DA LI + HG V A +
Sbjct: 450 MVDRLCKAQRLDDACSIFEGLDHKTCR-----PDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504
Query: 169 LPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ D + + VY +L+ + + + + + ++M G + L N M K E
Sbjct: 505 MLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
++ ++ E+K G D SY I + G + +F MK ++ + ++
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK-EQGCVLDTRAYN 623
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
T+ + K G+V KA + L ++++ V Y ++ + + +E Y ++ +S
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
+ + Y ++I ++G I+ I EE + + + N ++ VK +A
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F S+ + PN ++ L G + R+ +A
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 13/275 (4%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D R Y L++ V+A A L M+++G + + YN ++ + K + ++
Sbjct: 581 IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
++ EMK KG V +Y + ++ +FE K K + N +S++ +
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK-SKGIELNVVIYSSLIDGF 699
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV--FPGV 350
K+G++++A + + + + ++ LL ++ K EE+ ++S+
Sbjct: 700 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD---ALVKAEEISEALVCFQSMKDLKCT 756
Query: 351 TN-LGYHAMISSLARIGDIEGMEKIFEEWLSV-KSSYDPRIAN--LMMSWYVKEGNFDKA 406
N + Y +I L +I K F W + K + P + M+S K GN +A
Sbjct: 757 PNYITYSILIHGLCKI---RKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEA 813
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ F E+GG +S + + EG R +A
Sbjct: 814 DTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDA 848
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/197 (17%), Positives = 83/197 (42%), Gaps = 34/197 (17%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG++++ + A +L ++ + KG ++ + Y+ ++ + K+ DE ++ E+
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715
Query: 238 KEKGIRLDVYSYNIWLSS---------------------CGSQGSTEKM--EGVFELMKV 274
+KG+ +VY++N L + C T + G+ ++ K
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775
Query: 275 DKAV-----------NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+KA PN T++TM + K G + +A+ + + + D Y+ +
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAI 835
Query: 324 LSLYGSVGKKEEVYRVW 340
+ + + + YR++
Sbjct: 836 IEGLSNANRASDAYRLF 852
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V+ L K R A +++ ++G + I LI V ++ +L + +
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIEL-----NVVIYSSLIDGFGKVGRIDEAYLIMEE 714
Query: 172 TLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
++ + + LL+A V+A A + M+D + + Y++++ KI++
Sbjct: 715 LMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRK 774
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+++ EM+++G + +V++Y +S G+ + + +FE K
Sbjct: 775 FNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 124/287 (43%), Gaps = 17/287 (5%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK--- 223
L L L YGA++N + + + L+ +M +G V+ YN ++ K
Sbjct: 265 LKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 324
Query: 224 -IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
+K + +E M+ E G + D+ +YN +S G + + + E + K + PN
Sbjct: 325 IVKAVETIEGMI----ECGCKPDIVTYNTLISGSCRDGKVSEADQLLE-QALGKGLMPNK 379
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN- 341
+++ + Y K G ++A L + R D V Y L+ G+ + +
Sbjct: 380 FSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREK 439
Query: 342 -LYRSVFP--GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
L R VFP G+ Y+ ++S L + + + + E L D + ++ ++
Sbjct: 440 MLERGVFPDAGI----YNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFI 495
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ GN D+A F IE+G P + + +G+ + + +A++C+
Sbjct: 496 RNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACI 542
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 113/263 (42%), Gaps = 5/263 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ R A+ L+++ KG + Y ++ Y K YD + +
Sbjct: 343 DIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWL 402
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM E+G + D+ +Y + G + + E M +++ V P+ ++ + + K
Sbjct: 403 IEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKM-LERGVFPDAGIYNILMSGLCK 461
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
++ A+ L + + D Y L+ + G +E +++ L + + PG+
Sbjct: 462 KFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGI-- 519
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+GY+AMI + G ++ + D + ++ YVK+ + D A+ F
Sbjct: 520 VGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFRE 579
Query: 413 IIEEGGKPNSTSWETLAEGHIRE 435
+++ KPN ++ +L G R+
Sbjct: 580 MVKMKCKPNVVTYTSLINGFCRK 602
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 126/291 (43%), Gaps = 34/291 (11%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +LL R+R+ E++++ MR + + P M++ I+ Y + S +
Sbjct: 97 YSSLLKLLARSRVFSEMEVVLENMRVEEMS----PTREAMSIV--IQAYSD-----SGLV 145
Query: 239 EKGIRL------------DVYSYNIWLSSCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTF 285
EK + L DV + N L+ G E ++ E++++D A + +
Sbjct: 146 EKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNY 205
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWN 341
ST M + + K EE + +E R G+ +P Y+ L+ Y G E ++
Sbjct: 206 ST-CIMVKGLCKEGKLEEGRKLIEDR-WGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFI 263
Query: 342 --LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+ P V Y A+I+ + GD + ++++ E S + + ++ N ++ K
Sbjct: 264 ELKLKGFLPTVET--YGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYK 321
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
G+ KA +IE G KP+ ++ TL G R+ ++ EA L+ A
Sbjct: 322 HGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALG 372
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 117/283 (41%), Gaps = 21/283 (7%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D VY L++ ++R A L + +KG + YN M+ Y K +
Sbjct: 480 VLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAM 539
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ ++ MK++ + D ++Y+ + Q + + +F M V PN T++++
Sbjct: 540 ACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREM-VKMKCKPNVVTYTSLING 598
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-- 349
+ + G + ++ + R +++ + V Y L+ GS K+ ++ + + +
Sbjct: 599 FCRKGDLHRSLKIFREMQACGLVPNVVTYSILI---GSFCKEAKLIDAASFFEEMLMNKC 655
Query: 350 -VTNLGYHAMISSLARIGD----------IEGMEKIFEEWLS--VKSSYDPRIA--NLMM 394
++ ++ +++ ++ G E + +F + + + PR A N ++
Sbjct: 656 VPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSIL 715
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
+ G F A N + +G P+S S+ L G E R
Sbjct: 716 ICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGR 758
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 140/327 (42%), Gaps = 7/327 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF-LSLP 170
++ L K ++Y A+++++ M + + L + + + E F + L
Sbjct: 296 IIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLA 355
Query: 171 DTLKDRRV-YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ LK V Y ALL AY M A + ++++ G+ + Y ++ Y + ++ +
Sbjct: 356 EGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQK 415
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ +K ++ ++ SYN + + GS G E + M+ DK ++PN + T+
Sbjct: 416 AREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDK-IHPNVVSICTLL 474
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+ GQ K + L E R + V Y+ + Y +VG+ ++ ++N R
Sbjct: 475 AACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIK 534
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE----GNFDK 405
++ Y +IS ++ EE + +K + + ++ Y K+ G +
Sbjct: 535 SDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIE 594
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGH 432
AE+ FN + G P+ ++ + + +
Sbjct: 595 AESTFNLMKSLGCSPDVVTYTAMLDAY 621
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 132/327 (40%), Gaps = 42/327 (12%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL----PDTLKDR 176
+Y AL ++ + +G R + I + + K+ A D F S+ + D
Sbjct: 270 QYSKALSYFELI--KGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDV 327
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+ ++++ Y N E + M +G + + YN ++ Y +E + +E
Sbjct: 328 VTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNE 387
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+K+ G R DV SY L++ G +K +F+++K + + PN +++ + Y G
Sbjct: 388 IKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNN-LKPNIVSYNALIDAYGSNG 446
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+E A E LR +E + V LL+ G G+K ++ V + + + Y+
Sbjct: 447 LLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYN 506
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+ I S Y+ G +DKA +NS+ ++
Sbjct: 507 SAIGS-----------------------------------YINVGEYDKAIDLYNSMRKK 531
Query: 417 GGKPNSTSWETLAEGHIRERRILEALS 443
K +S ++ L G + + EALS
Sbjct: 532 KIKSDSVTYTVLISGCCKMSKFGEALS 558
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 153/368 (41%), Gaps = 18/368 (4%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
+++EL + +H V+ WM N+ + + + + L A+ + A F +
Sbjct: 120 LIRELTQRGSIEHCNLVFSWMKNQ-KNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQK 178
Query: 172 TL--KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D Y AL+NA+ RA A ++D M YN ++ + E
Sbjct: 179 CRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 238
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ +M + G+ D+ ++NI L++ S K FEL+K + P+ TT + +
Sbjct: 239 ALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIK-GTHIRPDTTTHNIII 297
Query: 290 TMYIKMGQVEKAEESLRRVESRIT--GRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRS 345
+K+ Q +KA + ++ + + D V + ++ LY G E +N L
Sbjct: 298 HCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEG 357
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNF 403
+ P + + Y+A++ + A G ++F E ++ + P + + +++ Y +
Sbjct: 358 LKPNI--VSYNALLGAYAARGMENEALQVFNEI--KQNGFRPDVVSYTSLLNAYGRSRKP 413
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVN 463
KA F I KPN S+ L + + + +A+ L+ E K P V+
Sbjct: 414 QKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILR---EMEQDK-IHPNVVS 469
Query: 464 VINFFKAC 471
+ AC
Sbjct: 470 ICTLLAAC 477
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 128/291 (43%), Gaps = 17/291 (5%)
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M+ +GI+ D+ +YN LS+C +G ++ E VF M + + P+ TT+S + + K+
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMN-EGGILPDITTYSYLVETFGKLN 59
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++EK E L+ +ES + D Y+ LL + G +E V+ + Y
Sbjct: 60 RLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYS 119
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+++ R G + + +F E + + N++++ + + G F + F+ ++EE
Sbjct: 120 ILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEE 179
Query: 417 GGKPNSTSWETL----AEG-----------HIRERRILEALSCLKGAFAAEGAKSWRPKP 461
+PN ++E L +G H+ E+ ++ + G A G + +
Sbjct: 180 NVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEA 239
Query: 462 VNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAEN 512
+ N + + + + + + + G KE + + L+ + VA N
Sbjct: 240 LVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAI-LLKMGQSGVARN 289
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 118/258 (45%), Gaps = 5/258 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y LL+A R + AE++ M + G Y+ ++ + K+ ++V ++
Sbjct: 9 DIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELL 68
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+ G D+ SYN+ L + GS ++ GVF M+ V PN T+S + +Y +
Sbjct: 69 KEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCV-PNAATYSILLNLYGR 127
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G+ + + ++ T + Y+ L++++G G +EV +++ + +V P +
Sbjct: 128 HGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMET 187
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y +I + + G E +KI + ++ Y + +++A FN+
Sbjct: 188 --YEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNT 245
Query: 413 IIEEGGKPNSTSWETLAE 430
+ E G KP ++ +L +
Sbjct: 246 MNEVGSKPTVETYNSLIQ 263
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 124/287 (43%), Gaps = 17/287 (5%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK--- 223
L L L YGA++N + + + L+ +M +G V+ YN ++ K
Sbjct: 246 LKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 305
Query: 224 -IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
+K + +E M+ E G + D+ +YN +S G + + + E + K + PN
Sbjct: 306 IVKAVETIEGMI----ECGCKPDIVTYNTLISGSCRDGKVSEADQLLE-QALGKGLMPNK 360
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN- 341
+++ + Y K G ++A L + R D V Y L+ G+ + +
Sbjct: 361 FSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREK 420
Query: 342 -LYRSVFP--GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
L R VFP G+ Y+ ++S L + + + + E L D + ++ ++
Sbjct: 421 MLERGVFPDAGI----YNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFI 476
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ GN D+A F IE+G P + + +G+ + + +A++C+
Sbjct: 477 RNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACI 523
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 195 AELLIDKMRDKGYA---------------VHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
A L++D++RD ++ Y+ ++ L + + + E+E ++ M+
Sbjct: 63 AHLVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRV 122
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+ + + +I + + G EK ++ + P+ +++ M +K+G++E
Sbjct: 123 EEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIE 182
Query: 300 -----------------KAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYR 338
K EE + +E R G+ +P Y+ L+ Y G E
Sbjct: 183 IARKFTCIMVKGLCKEGKLEEGRKLIEDR-WGQGCIPNIIFYNTLIDGYCKKGDMEMANG 241
Query: 339 VWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
++ + P V Y A+I+ + GD + ++++ E S + + ++ N ++
Sbjct: 242 LFIELKLKGFLPTVET--YGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDA 299
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
K G+ KA +IE G KP+ ++ TL G R+ ++ EA L+ A
Sbjct: 300 RYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALG 353
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 106/249 (42%), Gaps = 5/249 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ R A+ L+++ KG + Y ++ Y K YD + +
Sbjct: 324 DIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWL 383
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM E+G + D+ +Y + G + + E M +++ V P+ ++ + + K
Sbjct: 384 IEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKM-LERGVFPDAGIYNILMSGLCK 442
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
++ A+ L + + D Y L+ + G +E +++ L + + PG+
Sbjct: 443 KFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGI-- 500
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+GY+AMI + G ++ + D + ++ YVK+ + D A+ F
Sbjct: 501 VGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFRE 560
Query: 413 IIEEGGKPN 421
+++ KPN
Sbjct: 561 MVKMKCKPN 569
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 119/253 (47%), Gaps = 5/253 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ V+++M A L K+ +G++ Y ++ +K + ++ E + EM
Sbjct: 848 TYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEM 907
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G + + YNI L+ G+TEK+ +F+ M VD+ +NP+ +++ + G+
Sbjct: 908 LDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNM-VDQGINPDIKSYTVLIGALCTAGR 966
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ + R++ D + Y+ L+ G G+ EE ++N Y++
Sbjct: 967 LNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNS 1026
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I L + G K++EE L K+ + P + N ++ Y G+ D A A + +I
Sbjct: 1027 LILYLGKEGKAAEAGKMYEELL--KNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIV 1084
Query: 416 EGGKPNSTSWETL 428
G PNS+++ L
Sbjct: 1085 GGCPPNSSTYMQL 1097
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 100/212 (47%), Gaps = 2/212 (0%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
Y+V+M + K ++ + V ++ EM++ G++ +VYSY I + G G E+ + + M+
Sbjct: 220 YSVLMLAFGK-RDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKME 278
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
D+ P+ T + + + G+V A++ ++++ DRV Y LL G G
Sbjct: 279 -DEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDS 337
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
V +WN ++ + Y A++ +L ++G ++ +F++ N +
Sbjct: 338 RSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSL 397
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
+S ++K + A FN + G PN ++
Sbjct: 398 ISGFLKADRLNHALELFNHMNIHGPTPNGYTY 429
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 127/300 (42%), Gaps = 38/300 (12%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y A+++A + A + D+M+ KG YN +++ ++K + + + M
Sbjct: 359 YTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMN 418
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK----VDKAVNPNWTTFST------- 287
G + Y+Y ++++ G G + K +ELMK V V N +S
Sbjct: 419 IHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLG 478
Query: 288 MA-------------------TMYIK-MGQVEKAEESLRRVESRITGR---DRVPYHYLL 324
MA TM IK + A+E+++ I R D + + L+
Sbjct: 479 MAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLI 538
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
G+ E +++++ + + T+ Y+ +++ L R G ++ + + EE S +S
Sbjct: 539 DTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNS--NS 596
Query: 385 YDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
Y P + N ++ K G + A ++ +G P+ +S+ T G ++E R+ EA
Sbjct: 597 YPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAF 656
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 112/281 (39%), Gaps = 48/281 (17%)
Query: 163 EDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
+DFFLS L+ +++ A L+ K G ++ + YN ++ +
Sbjct: 740 DDFFLS------------PLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLV 787
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
D E + SEMK G D ++YN+ L + G E M V + M K +
Sbjct: 788 DENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHC-KGYESTY 846
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL 342
T++T+ + +K + +A + LY Y++ +
Sbjct: 847 VTYNTIISGLVKSKMLYEA----------------------MDLY---------YKLMSE 875
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
S P Y ++ L + G IE E +F+E L + I N++++ Y GN
Sbjct: 876 GFSPTPCT----YGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGN 931
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+K F +++++G P+ S+ L R+ ++LS
Sbjct: 932 TEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLS 972
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K + A+++Y + + G F + LD + K + AED F + D
Sbjct: 852 IISGLVKSKMLYEAMDLYYKLMSEG--FSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLD 909
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+R +Y LLN Y R+ GN E L M D+G Y V++
Sbjct: 910 YGCKPNRAIYNILLNGY---RLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGR 966
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
++ S ++ E G+ D+ +YN+ + G G E+ +F M+ + PN T++
Sbjct: 967 LNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDME-KSGIAPNLYTYN 1025
Query: 287 TMATMYIKMGQVEKA 301
++ K G+ +A
Sbjct: 1026 SLILYLGKEGKAAEA 1040
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 189/477 (39%), Gaps = 77/477 (16%)
Query: 24 PCKIPRCFTRLHQQSAIKHQRQKLPVIKCSMSQIHSYGTV-------DFERRPMIKWN-- 74
P + + F + QQ I H + + + + ++G V D +R ++K N
Sbjct: 92 PAEALQLFKSVAQQPRIVHTTESCNYM---LELMRAHGRVRDMAQVFDLMQRQIVKANVG 148
Query: 75 ---AIFRKLSLMDNPQLGSASV-LNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYD 130
IFR L + L SA V L ++ G L + ++ L K + A+EVY
Sbjct: 149 TFLTIFRSLGMEGG--LRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYK 206
Query: 131 WMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAY---V 187
M A+D + V +A + ++ L++ +G N Y +
Sbjct: 207 VM----------ATDGIVPSVRTYSVLMLAFGKRDVETVVWLLREMEDHGVKPNVYSYTI 256
Query: 188 RARMRGNAEL------LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
R+ G A ++ KM D+G + V++ + + + + +MK
Sbjct: 257 CIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASD 316
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ D +Y L CG G + + ++ MK D N N ++ + ++G+V++A
Sbjct: 317 QKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKAD-GYNDNVVAYTAVVDALCQVGRVDEA 375
Query: 302 EESLRRVE------------SRITG---RDRV------------------PYHYLLSL-- 326
+ +++ S I+G DR+ Y Y+L +
Sbjct: 376 SDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINY 435
Query: 327 YGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
YG G+ + + + L +S + P V + +A++ SLA+ G + +++F E S+
Sbjct: 436 YGKSGESLKAIKRYELMKSKGIVPDV--VAGNAVLYSLAKSGRLGMAKRVFHELKSIGVC 493
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D +M+ K N D+A F+ +IE P+ + +L + + R EA
Sbjct: 494 PDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEA 550
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 104/247 (42%), Gaps = 5/247 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+++M Y + + YN ++ K E + M+ M KG D+ SYN L
Sbjct: 588 LLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLV 647
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR-VESRITGRD 316
+ + +F MK K + P++TT T+ ++K G + +A +L+ + + D
Sbjct: 648 KEDRLTEAFRIFCQMK--KVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKAD 705
Query: 317 RVPYHYLL-SLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
R +H L+ + G ++ + N+ S + + +I L + ++
Sbjct: 706 RSSFHSLMEGILKRAGMEKSIEFAENIALSRIL-LDDFFLSPLIRHLCKSKKALEAHELV 764
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+++ S+ S N ++ V E D AE F+ + G P+ ++ + + +
Sbjct: 765 KKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKS 824
Query: 436 RRILEAL 442
RI + L
Sbjct: 825 MRIEDML 831
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 129/307 (42%), Gaps = 44/307 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ + L++AY R + + +M G+ YN ++ + + ES+V
Sbjct: 517 DKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVV 576
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW------------ 282
+M++KG + + SY++ L G+ +E V E+ D V P+W
Sbjct: 577 LDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKV-EMEIYDGHVFPSWMLLRTLVLTNYK 635
Query: 283 -----------------------TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
++M +M+++ ++EKA E L + + V
Sbjct: 636 CRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVT 695
Query: 320 YHYLLSLYGSVG---KKEEVYR-VWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
Y+ L+ LY VG K EE+ + + N + P V + Y+ +I + G ++ +I
Sbjct: 696 YNSLIDLYARVGDCWKAEEMLKDIQN--SGISPDV--VSYNTVIKGFCKKGLVQEAIRIL 751
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
E + P N MS Y G F +A+ +IE G PN +++ + +G+I+
Sbjct: 752 SEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKA 811
Query: 436 RRILEAL 442
++ EA+
Sbjct: 812 KKHKEAM 818
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 166/378 (43%), Gaps = 16/378 (4%)
Query: 62 TVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRS----LTKWELCRVVKELR 117
+VD+ +K+ + K M N +GS+ LND + S L + ++ ++K L
Sbjct: 117 SVDYNHFDDVKFGFLSGKSKFMLNCIVGSS--LNDLIEFFNSVKGELLESDITGLLKGLD 174
Query: 118 KFRRYKHALEVYDW--MNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP--DTL 173
++ A +++W +N E ++ + ++ + + A F +P +
Sbjct: 175 LSGNWERAFLLFEWVWLNFGSENMKVDDQSVEFMVKMLGRESQYSIASKLFDIIPVEEYS 234
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI-KEYDEVES 232
D + +L+AY R A + +KM++ G + YNVM+ +Y K+ + + +
Sbjct: 235 LDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILE 294
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
++ EM+ KG+ D ++ +S+CG +G ++ F+ +K++ P T+++M ++
Sbjct: 295 LLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLN-GYKPGTATYNSMLQVF 353
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGV 350
K G +A L+ +E D + Y+ L++ Y G +E V + S V P
Sbjct: 354 GKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNA 413
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y +I++ + GD + ++F + + + N ++ K +
Sbjct: 414 --ITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKIL 471
Query: 411 NSIIEEGGKPNSTSWETL 428
+ G P+ +W T+
Sbjct: 472 CDMKLNGCPPDRITWNTM 489
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 113/232 (48%), Gaps = 9/232 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ AYVRA +ID M KG +++ Y ++ Y K + D+ +
Sbjct: 377 DAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVF 436
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+MKE G +V +YN L G + +E M + MK++ P+ T++TM + +
Sbjct: 437 GQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLN-GCPPDRITWNTMLAVCGE 495
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G+ + + LR +++ D+ ++ L+S YG G + +V +++ + P +T
Sbjct: 496 KGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITT 555
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGN 402
Y+A++++LAR G+ + E + + K + P +L++ Y K GN
Sbjct: 556 --YNALLNALARRGNWKAAESVVLDMR--KKGFKPNETSYSLLLHCYSKAGN 603
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 147/316 (46%), Gaps = 15/316 (4%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRR 177
R + LE+ D M ++G F I + + A FF L L
Sbjct: 287 RAWSMILELLDEMRSKGLEFDEFTCTTVISA--CGREGILDEARRFFDDLKLNGYKPGTA 344
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ++L + +A + A ++ +M D ++ YN ++ Y++ +DE +++ M
Sbjct: 345 TYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTM 404
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ + +Y +++ G G +K VF MK V PN T++ + + +G+
Sbjct: 405 ASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCV-PNVCTYNNVLVL---LGK 460
Query: 298 VEKAEESLRRV-ESRITG--RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++E+ ++ + + ++ G DR+ ++ +L++ G GK++ V +V ++
Sbjct: 461 RSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKET 520
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNS 412
++ +IS+ R G + K++ E V + + P I N +++ + GN+ AE+
Sbjct: 521 FNTLISAYGRCGSEVDVAKMYGEM--VAAGFTPCITTYNALLNALARRGNWKAAESVVLD 578
Query: 413 IIEEGGKPNSTSWETL 428
+ ++G KPN TS+ L
Sbjct: 579 MRKKGFKPNETSYSLL 594
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 12/252 (4%)
Query: 188 RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY 247
R+R ++L D M+ G + +N M+ + + + V ++ EMK G D
Sbjct: 461 RSRSEDMIKILCD-MKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKE 519
Query: 248 SYNIWLSS---CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
++N +S+ CGS+ KM G V P TT++ + + G + AE
Sbjct: 520 TFNTLISAYGRCGSEVDVAKMYGEM----VAAGFTPCITTYNALLNALARRGNWKAAESV 575
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV-WNLYRS-VFPGVTNLGYHAMISSL 362
+ + + + Y LL Y G + +V +Y VFP L ++ +
Sbjct: 576 VLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLL--RTLVLTN 633
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
+ ++GME+ F + + D + N M+S +V+ +KA + I G +PN
Sbjct: 634 YKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNL 693
Query: 423 TSWETLAEGHIR 434
++ +L + + R
Sbjct: 694 VTYNSLIDLYAR 705
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 12/195 (6%)
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV-EKAE 302
LDV + L + G ++ +FE MK + ++P T++ M +Y KMG+
Sbjct: 235 LDVKACTTVLHAYARTGKYKRAIEIFEKMK-ETGLDPTLVTYNVMLDVYGKMGRAWSMIL 293
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-----NLYRSVFPGVTNLGYHA 357
E L + S+ D ++S G G +E R + N Y+ PG Y++
Sbjct: 294 ELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYK---PGTAT--YNS 348
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
M+ + G I +E D N +++ YV+ G D+ A +++ +G
Sbjct: 349 MLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKG 408
Query: 418 GKPNSTSWETLAEGH 432
PN+ ++ T+ +
Sbjct: 409 VMPNAITYTTVINAY 423
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/468 (20%), Positives = 194/468 (41%), Gaps = 51/468 (10%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF-----F 166
V++ + + + ALE+ + M G + L I +D K + A F F
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVT--WGILIDAFCKAGKMDEAMGFLKEMKF 240
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ L D VY +L+ + + L D++ ++G + ++ YN ++ + K+ +
Sbjct: 241 MGLE---ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
E + M E+G+R +VY+Y + G T++ + LM ++K PN T++
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM-IEKDEEPNAVTYN 356
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--R 344
+ K G V A E + ++ R T D + Y+ LL + G +E ++ L
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S + + Y+A+I L + + I++ + + D N++++ +K G+ +
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 405 KAEAFFNSIIEEGGKPNSTSWETL------------AEGHIRERRILEA------LSCLK 446
KA + I + NS ++ + A+G + + R+ E +CL
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 447 GAFAAEGA--KSWR-----------PKPVNVINFFKACEEESDMGSKEAFVALLRQPG-- 491
+ EG+ ++WR P V+ + D+ S E+ + + + G
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 492 -----YRKEKDYMSLIGLTDEAVAENNKKNDEDSDEDSEMLLSQLQFA 534
Y K + +G DEA++ +K D + D+ + S L++
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 131/303 (43%), Gaps = 23/303 (7%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
DT + LL YV+ R G A ++ M +G+A + +N+++ + E +
Sbjct: 101 TDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK 160
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE--KMEGVFELMKVDKAVNPNWT--TF 285
S++ EM+ + DV+SYN + +G E ++E EL K +W+ T+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVI-----RGFCEGKELEKALELANEMKGSGCSWSLVTW 215
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LY 343
+ + K G++++A L+ ++ D V Y L+ + G+ + +++ L
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEG 401
R P + Y+ +I ++G ++ +IFE ++ P + ++ G
Sbjct: 276 RGDSP--CAITYNTLIRGFCKLGQLKEASEIFE--FMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKP 461
+A N +IE+ +PN+ ++ + ++ + +A+ E K R +P
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE------IVELMKKRRTRP 385
Query: 462 VNV 464
N+
Sbjct: 386 DNI 388
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 145/325 (44%), Gaps = 17/325 (5%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERF--RLSASDAAIQLDLIAKVHGVASAEDFFLSL 169
++ L K + A ++Y M+ RG F ++ + L+ ++ G S D + L
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARG-IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMI-L 213
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ +Y L+NA + A+ L+ M +G + Y+ +M Y + E
Sbjct: 214 KNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQN 273
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ + M + G+ +VYSYNI ++ C + E M + E++ K + P+ T++++
Sbjct: 274 AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH--KNMVPDTVTYNSL 331
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY----- 343
K G++ A + + R D V Y SL ++ K + + + L+
Sbjct: 332 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYT---SLLDALCKNQNLDKATALFMKMKE 388
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
R + P T Y A+I L + G ++ +++F+ L D +M+S KEG F
Sbjct: 389 RGIQP--TMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMF 446
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETL 428
D+A A + + + G PN+ ++E +
Sbjct: 447 DEALAIKSKMEDNGCIPNAVTFEII 471
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 147/356 (41%), Gaps = 9/356 (2%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S SVL K G L ++K L K +L +D + +G F++
Sbjct: 64 SFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQG--FQMDHVSYGTL 121
Query: 150 LDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
L+ + K+ A + D T + +Y +++ + ++ A L +M +G
Sbjct: 122 LNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
++ Y ++ + + + S++ EM K I VY YNI +++ +G+ ++ +
Sbjct: 182 FPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKN 241
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ +M + + P T+ST+ Y +G+V+ A++ + + Y+ +++
Sbjct: 242 LLAVM-TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGL 300
Query: 328 GSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+ +E + L++++ P Y+++I L + G I + E
Sbjct: 301 CKCKRVDEAMNLLREMLHKNMVPDTVT--YNSLIDGLCKSGRITSALNLMNEMHHRGQPA 358
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D ++ K N DKA A F + E G +P ++ L +G + R+ A
Sbjct: 359 DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 414
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 114/259 (44%), Gaps = 11/259 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ +L + + + A L +M KG + + N+++ + + + S++ ++
Sbjct: 13 FNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKIL 72
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G + D + N + +G +K F V + + ++ T+ K+G+
Sbjct: 73 KLGYQPDTITLNTLMKGLCLKGEVKKSLH-FHDKVVAQGFQMDHVSYGTLLNGLCKIGET 131
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNL 353
A + LR +E R T + V Y+ ++ + K + V ++LY R +FP +
Sbjct: 132 RCAVKLLRMIEDRSTRPNVVMYNTIID---GLCKDKLVNEAYDLYSEMDARGIFPDA--I 186
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +I +G + G + +E + + I N++++ KEGN +A+ +
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246
Query: 414 IEEGGKPNSTSWETLAEGH 432
+EG KP ++ TL +G+
Sbjct: 247 TKEGIKPGVVTYSTLMDGY 265
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 120/269 (44%), Gaps = 9/269 (3%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L+N + + ++ K+ GY ++ N +M E + ++ +G
Sbjct: 51 LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQG 110
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
++D SY L+ G T + +++ D++ PN ++T+ K V +A
Sbjct: 111 FQMDHVSYGTLLNGLCKIGETRCAVKLLRMIE-DRSTRPNVVMYNTIIDGLCKDKLVNEA 169
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMI 359
+ +++R D + Y L+ + +G+ + + + + +++ PGV Y+ +I
Sbjct: 170 YDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYI--YNILI 227
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++L + G+++ + + + K P + + +M Y G A+ F+++++ G
Sbjct: 228 NALCKEGNVKEAKNLLA--VMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMG 285
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLK 446
PN S+ + G + +R+ EA++ L+
Sbjct: 286 VNPNVYSYNIMINGLCKCKRVDEAMNLLR 314
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 116/295 (39%), Gaps = 47/295 (15%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG LLN + A L+ + D+ + + YN ++ K K +E +
Sbjct: 114 DHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLY 173
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMY 292
SEM +GI D +Y + G ++ G F L+ + K +NP ++ +
Sbjct: 174 SEMDARGIFPDAITYTTLIYGFCLLG---QLMGAFSLLDEMILKNINPGVYIYNILINAL 230
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K G V++A+ L +V KE + PGV
Sbjct: 231 CKEGNVKEAKNLL-----------------------AVMTKE----------GIKPGVVT 257
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y ++ +G+++ ++IF + + + + N+M++ K D+A
Sbjct: 258 --YSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLRE 315
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINF 467
++ + P++ ++ +L +G + RI AL+ + R +P +V+ +
Sbjct: 316 MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN-------EMHHRGQPADVVTY 363
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 146/382 (38%), Gaps = 45/382 (11%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
++ N ++ G + L +++ + R AL + D M + F + +D
Sbjct: 82 ALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEM--KSNTFDADIVLYNVCID 139
Query: 152 LIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
KV V A FF + + D Y +++ +A A + ++M
Sbjct: 140 CFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVP 199
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+ YN M+ Y ++DE S++ + KG V +YN L+ G +G T+K +F
Sbjct: 200 CAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIF 259
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA---------------------------- 301
E MK D PN T++ + M K G VE A
Sbjct: 260 EEMKRDAM--PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCK 317
Query: 302 ----EESLRRVES---RITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+E+ E ++ D + L+ G G+ ++ YR++ L P V
Sbjct: 318 AQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNV-- 375
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y ++I + + E K+++E + S D + N M K G +K A F
Sbjct: 376 VVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEE 435
Query: 413 IIEEGGKPNSTSWETLAEGHIR 434
I G P++ S+ L ++
Sbjct: 436 IKARGFLPDTRSYSILIHSLVK 457
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 118/254 (46%), Gaps = 10/254 (3%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L ++M++ GY V+ ++ ++ + D S++ EMK D+ YN+ + G
Sbjct: 83 LFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFG 142
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G + F MK + V P+ T+++M + K ++++A E ++E
Sbjct: 143 KVGKVDMAWKFFHEMKANGLV-PDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCA 201
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
Y+ ++ YGS GK +E Y + R+ P V + Y+ +++ L + G + +IF
Sbjct: 202 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSV--VAYNCILTCLGKKGKTDKALRIF 259
Query: 376 EEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
EE +K P + N+++ K GN + A +++ E G PN + + +
Sbjct: 260 EE---MKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLC 316
Query: 434 RERRILEALSCLKG 447
+ +++ EA S +G
Sbjct: 317 KAQKLDEACSIFEG 330
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 169/392 (43%), Gaps = 19/392 (4%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L + G T + +V K R+ A ++ M R +FR + S +
Sbjct: 13 ILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMM--RHFKFRPAFSAYTTLIGA 70
Query: 153 IAKVHGVASAEDFFLSLPDTLKD--RRVYGALLNAYVRA---RMRGNAEL-LIDKMRDKG 206
+++V D L+L + +++ V LL +R R +A L L+D+M+
Sbjct: 71 LSEV----GESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNT 126
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKM 265
+ + YNV + + K+ + D EMK G+ D +Y + C + E +
Sbjct: 127 FDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAV 186
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E +FE M+ ++ V P ++TM Y G+ ++A L R ++ V Y+ +L+
Sbjct: 187 E-IFEQMEQNRQV-PCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILT 244
Query: 326 LYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
G GK ++ R++ + R P + Y+ +I L + G++E K+ +
Sbjct: 245 CLGKKGKTDKALRIFEEMKRDAMPNLPT--YNIIIGMLCKAGNVEAAFKVRDAMKEAGLF 302
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
+ R N+M+ K D+A + F + + P+ ++ +L +G ++ R+ +A
Sbjct: 303 PNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRI 362
Query: 445 LKGAFAAEGAKSWRPKPVNVINFFKACEEESD 476
+ A+ + + NFFK C+ + D
Sbjct: 363 YERMLDADQIPNVVVYTSLIRNFFK-CDRKED 393
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 141/337 (41%), Gaps = 5/337 (1%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K + A +V D M G + I +D + K + A F +
Sbjct: 276 IIGMLCKAGNVEAAFKVRDAMKEAG--LFPNVRTINIMIDRLCKAQKLDEACSIFEGMDY 333
Query: 172 TL--KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ D + +L++ + +A + ++M D + + Y ++ + K ++
Sbjct: 334 KVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKED 393
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
M EM G D+ N ++ G TEK +FE +K + P+ ++S +
Sbjct: 394 GHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKA-RGFLPDTRSYSILI 452
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+K G + E ++ + D Y+ ++ + GK + Y++ +++
Sbjct: 453 HSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHH 512
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
T + Y +++ LA+I ++ +FEE S + I + ++ + K G D+A
Sbjct: 513 PTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLV 572
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++++G PN +W L +G ++ I EAL C +
Sbjct: 573 MEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQ 609
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 118/268 (44%), Gaps = 9/268 (3%)
Query: 182 LLNAYVRARMRGN----AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
LLN Y+ + L ++++ +G+ + Y++++ +K E + M
Sbjct: 412 LLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAM 471
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K++G LD +YN + G K + E MK +P T+ ++ K+ +
Sbjct: 472 KDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT-MGHHPTVVTYGSVVDGLAKIDR 530
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+++A +S ++V Y L+ +G VG+ +E Y V + + + P V +
Sbjct: 531 LDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYT--W 588
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ ++ L + +I F+ +K + + ++++ K F+KA F+ + +
Sbjct: 589 NCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQK 648
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALS 443
+G KPN+ ++ + G + + +A S
Sbjct: 649 QGLKPNTITYTAMISGLAKSGNVAQASS 676
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 103/267 (38%), Gaps = 36/267 (13%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R Y +++ + ++ A L+++M+ G+ + Y ++ KI DE +
Sbjct: 479 DTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLF 538
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E K GI L+ Y+ + G G ++ V E M + K + PN T++ + +K
Sbjct: 539 EEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEM-MQKGLTPNVYTWNCLLDGLVK 597
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++ +A + ++ +++ Y L++ V K + + W + +
Sbjct: 598 AEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTIT 657
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y AMIS LA K GN +A + F
Sbjct: 658 YTAMISGLA-----------------------------------KSGNVAQASSLFERFR 682
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEA 441
GG P+S S+ + EG R L+A
Sbjct: 683 ASGGIPDSASYNAMIEGLSIANRALDA 709
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG++++ + A +L ++ + G ++ + Y+ ++ + K+ DE ++ EM
Sbjct: 517 TYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEM 576
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+KG+ +VY++N L + F+ MK D PN T+ + K+ +
Sbjct: 577 MQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMK-DLKCTPNQITYCILINGLCKVRK 635
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
KA + ++ + + + Y ++S G + ++ +R+ + Y+A
Sbjct: 636 FNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNA 695
Query: 358 MISSLARIGDIEGMEKIFEE 377
MI L+ ++FEE
Sbjct: 696 MIEGLSIANRALDAYQLFEE 715
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 121/273 (44%), Gaps = 6/273 (2%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y ++++A +AR AEL++ +M G+ + + YN M+ Y ++ E
Sbjct: 258 VVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETA 317
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
M EM +G+ ++ + N ++SS G +++ F+ M K PN T+S +
Sbjct: 318 GMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAA-KGHKPNLVTYSVLLHG 376
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPG 349
Y G +E D+ ++ ++ YG G +E ++ + V P
Sbjct: 377 YATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPD 436
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
Y +I++ +R+G + F + +++ + + + ++ + GN KA+
Sbjct: 437 ACT--YGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKEL 494
Query: 410 FNSIIEEG-GKPNSTSWETLAEGHIRERRILEA 441
+ ++ G +PN + ++ +E R++EA
Sbjct: 495 VSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEA 527
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 143/344 (41%), Gaps = 20/344 (5%)
Query: 113 VKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF--FLSLP 170
+ L K + K A E +D M +G + L + HG A+ F L+L
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLL--------HGYATEGCFVDMLNLF 390
Query: 171 DTLK------DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
++++ D+RV+ +++AY + M L+ +M+++G + Y +++ + ++
Sbjct: 391 NSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRM 450
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
+ ++M G++ + Y+ + G+ K + + M PN
Sbjct: 451 GRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVF 510
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--L 342
F+++ K G+V +A + V D + ++ L+ YG VGK E+ + V + +
Sbjct: 511 FNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMI 570
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ P V + Y+ +I R G I+ +F E LS +++ +G
Sbjct: 571 SAGIEPDVVS--YNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
A+ + +IE G + ++ + G R EA++ K
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFK 672
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 127/331 (38%), Gaps = 35/331 (10%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM-TLYMKIKEYDEVESMVSEM 237
Y L++ R R L + G + + ++++ LY + D V ++ M
Sbjct: 122 YNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRM 181
Query: 238 KEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
E G+ D SYN + + C S ++ + ++K +PN T++T+ + G
Sbjct: 182 PELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREG 241
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYG---SVGKKEEVYR--VWNLYRSVFPGVT 351
+V KA + + D V Y ++ ++ K E V R + N ++
Sbjct: 242 EVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP-----N 296
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y+ MI + G + +F E S + N MS K G +A FF+
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKAC 471
S+ +G KPN ++ L G+ E G F V+++N F +
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATE-----------GCF------------VDMLNLFNSM 393
Query: 472 EEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
E + + F ++ G R D LI
Sbjct: 394 EGNGIVADQRVFNIVIDAYGKRGMMDETMLI 424
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 121/271 (44%), Gaps = 7/271 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL+N RA AE ++ +M DKG V ++ Y V++ Y K+ + E +
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M +K + +V +Y QG + M K + N T++++ K
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM-CSKGLELNIFTYNSLINGLCK 507
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-PGV--T 351
G +E+A ++ ++ D Y ++ G++ + +E+ R +L + + G+ T
Sbjct: 508 AGNLEQAMRTMIDMDEAGLKPDVYTY---TTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y+ +++ G +EG +++ E L + N +M Y E N +
Sbjct: 565 IVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYK 624
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ + PN ++ L +GH + R + EAL
Sbjct: 625 GMLSQEVVPNENTYNILIKGHCKARNMKEAL 655
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/404 (19%), Positives = 169/404 (41%), Gaps = 23/404 (5%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL----PDTLKDRR 177
++ ALE+ D M + G R + I +I + L D +
Sbjct: 46 FQQALELLDEMKSNGVR-----PNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDCAPNVY 100
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++A ++ A L+ +M KG + + + YN ++ + K++ DEV ++ EM
Sbjct: 101 TYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEM 160
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++G R DV +Y + L S ++ + ++ V N + F+ ++T +
Sbjct: 161 SQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYN-SLFTALST-----AE 214
Query: 298 VEKAEESLRRVESRI---TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++ E+L +E I T ++V Y +L + + +E Y+V S ++
Sbjct: 215 GDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVS 274
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y ++ + A G ++ L D + N+++ + K G+ +A F S+
Sbjct: 275 YKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMC 334
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA-CEE 473
+ G P++ ++ TL + ++ A+ L A+ ++P + + K+ C E
Sbjct: 335 QRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQAD----FKPNVITYNSIIKSFCRE 390
Query: 474 ESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKND 517
+ + ++ F ++ + Y +L ++A + K +D
Sbjct: 391 QREEEARGIFQMMVDSGCFPDRVSYTTLKISKNDAAIYDQKVHD 434
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 138/339 (40%), Gaps = 56/339 (16%)
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR----------------------- 243
YAV+ + Y ++M + K E+ + ++ EMK G+R
Sbjct: 26 YAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL 85
Query: 244 -----------LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+VY+Y+I + + G + G+ M V K +PN T++ + +
Sbjct: 86 LHFRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEM-VKKGCSPNVVTYNALIDGF 144
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGV 350
K+ ++++ L+ + R D + Y +L ++ +E YR+ N R+V
Sbjct: 145 RKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNV---- 200
Query: 351 TNLGYHAMISSLARI-GD-----IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ Y+++ ++L+ GD + +EK+ +E + + + R LM+ K D
Sbjct: 201 --VTYNSLFTALSTAEGDRTTEALSLLEKMIQEG-TRPNQVNYRTVLLMLC---KNSRLD 254
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNV 464
+A S+ +G K + S++ L R ++L L G G K +NV
Sbjct: 255 EAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELL-GRMLGSGY-ILDTKTMNV 312
Query: 465 INFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLIG 503
+ K C+ + + F ++ ++ Y +LIG
Sbjct: 313 V-IHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIG 350
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 121/271 (44%), Gaps = 7/271 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL+N RA AE ++ +M DKG V ++ Y V++ Y K+ + E +
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M +K + +V +Y QG + M K + N T++++ K
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM-CSKGLELNIFTYNSLINGLCK 507
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-PGV--T 351
G +E+A ++ ++ D Y ++ G++ + +E+ R +L + + G+ T
Sbjct: 508 AGNLEQAMRTMIDMDEAGLKPDVYTY---TTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y+ +++ G +EG +++ E L + N +M Y E N +
Sbjct: 565 IVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYK 624
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ + PN ++ L +GH + R + EAL
Sbjct: 625 GMLSQEVVPNENTYNILIKGHCKARNMKEAL 655
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 123/275 (44%), Gaps = 20/275 (7%)
Query: 178 VYGALLNAYVRARMRGNAE----LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
Y +L+N +A GN E +ID M + G Y ++ + KE D S+
Sbjct: 497 TYNSLINGLCKA---GNLEQAMRTMID-MDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EM +KGI+ + +YN+ ++ G E + + E M ++K ++PN TT++++ Y
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWM-LEKNIHPNTTTYNSLMKQYC 611
Query: 294 KMGQVEKAEESLRRVESRITGRDRVP----YHYLLSLYGSV-GKKEEVYRVWNLYRSVFP 348
+EK +S + + ++ VP Y+ L+ + KE +Y + F
Sbjct: 612 ----IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF- 666
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+T Y+A+I L + ++FE+ + + +P + N + E N + A
Sbjct: 667 RLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLA 726
Query: 409 FFNSIIEEG-GKPNSTSWETLAEGHIRERRILEAL 442
+ ++E K + + + AE HI R LE +
Sbjct: 727 LCDELVEVTLVKSIADTDDDFAEEHISIMRFLEEM 761
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 121/287 (42%), Gaps = 5/287 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N A+ ++++M D G + +N ++ + +E +
Sbjct: 335 DVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLA 394
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ KG+ +VY++NI +++ G +FE MK P+ T++ +
Sbjct: 395 RELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMK-SSGCTPDEVTYNILIDNLCS 453
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G++ KA + L+ +E + V Y+ ++ + EE V++ G +
Sbjct: 454 SGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAIT 513
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +I L I+ ++ ++ +S + N +++ Y K+GN KA ++
Sbjct: 514 FNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMT 573
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKP 461
G + + ++ TL G + RR AL L+G K +P P
Sbjct: 574 ANGFEVDVVTYATLINGLCKARRTQAALKLLRGM----RMKGMKPTP 616
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 38/261 (14%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L+N Y + G+A I + G+ + ++ + + D ++ M ++G
Sbjct: 272 LINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG 331
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
DVY+Y+ ++ + G E+ +G+ M VD P+ TTF+T+ Q+E+A
Sbjct: 332 CEPDVYTYSTVINCLCNNGELEEAKGIVNQM-VDSGCLPDTTTFNTLIVALCTENQLEEA 390
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
+ R + + G VY ++ +I++
Sbjct: 391 LDLARELTVK-------------------GLSPNVYT----------------FNILINA 415
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L ++GD ++FEE S + D N+++ G KA +E G P
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKE-MEVSGCPQ 474
Query: 422 ST-SWETLAEGHIRERRILEA 441
ST ++ T+ +G + RRI EA
Sbjct: 475 STVTYNTIIDGLCKRRRIEEA 495
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 122/266 (45%), Gaps = 8/266 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDK-GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
+ + +Y R ++ +A L+ D G ++ YN ++T+ + + +ES +EM
Sbjct: 130 SFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSS 189
Query: 240 KGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+GI DV ++N + + C ++ + + + E+ D V P+ TTF+T+ +++ G +
Sbjct: 190 QGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCD--VAPDETTFTTLMEGFVEEGSI 247
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TNLGYH 356
E A R+ V + L++ Y +G+ + + + + + G + +
Sbjct: 248 EAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDA--LGYIQQEIADGFEPDRVTFS 305
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L + G ++ K+ L D + +++ G ++A+ N +++
Sbjct: 306 TFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDS 365
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G P++T++ TL E ++ EAL
Sbjct: 366 GCLPDTTTFNTLIVALCTENQLEEAL 391
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 124/276 (44%), Gaps = 5/276 (1%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D + ++ RA G+A+ + D MR G+ + + YN +++ + ++
Sbjct: 47 LCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQA 106
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ M + G DV +YN L G ++ +F+ V + P+ T++ + +
Sbjct: 107 LYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFD-GAVKRGFVPDVVTYNALINGF 165
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K ++++A+ L+R+ S D V Y+ L++ G+ +E R+ + + P V
Sbjct: 166 CKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEA-RMLIVDKGFSPNVIT 224
Query: 353 LGYHAMISSLAR-IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y +IS L R + +E ++ E+ + D N ++ +E +A F
Sbjct: 225 --YSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFG 282
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKG 447
S++ +G +P ++ L +G ++E R+ EA G
Sbjct: 283 SVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSG 318
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 8/277 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++ +A +A L++ M +KG + +N ++ K K DE E ++
Sbjct: 327 DAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLL 386
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S M+ KG + S+N + G +K F+ M + + V P T++ + K
Sbjct: 387 SGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM-LKRGVKPTVVTYNILVDGLCK 445
Query: 295 MGQVEKAEESLRRVESRI-TGR--DRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPG 349
Q + +E++ ++ I GR D V Y L+ G GK ++ R+ + P
Sbjct: 446 ARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPN 505
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
V Y+++IS L + ++ ++F + D ++S K+ DKA A
Sbjct: 506 VYT--YNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALAL 563
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
F+ +E G P S + +L +G R+ EAL L+
Sbjct: 564 FDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 132/280 (47%), Gaps = 19/280 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
+R Y ALL+ +A+ L ++M GY+ + YN ++ + K+ + DE +
Sbjct: 84 NRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIF 143
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++G DV +YN ++ ++ + + + M V +++ P+ T++++ K
Sbjct: 144 DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM-VSESLVPDVVTYNSLVNGLCK 202
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN----LYRSVFPGV 350
G+V++A + + + + Y L+S G E+ R+ + L + V G
Sbjct: 203 NGRVDEAR---MLIVDKGFSPNVITYSTLIS-----GLCRELRRLESARQLLEKMVLNGC 254
Query: 351 TN--LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKA 406
+ Y+A+I LAR + K+F L + Y+P + N+++ +KE ++A
Sbjct: 255 KPDIVSYNALIHGLAREQGVSEALKLFGSVL--RQGYEPEVPTYNILIDGLLKEDRVNEA 312
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
F+ +++ G +P++ ++ +G + R+ +AL LK
Sbjct: 313 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 352
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 128/294 (43%), Gaps = 18/294 (6%)
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
Y+ + +++ +K + ++ V ++ KG+ D+ ++NI++S +
Sbjct: 12 YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQ 70
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
VF+ M+ PN T++ + + G++ A+ R+ D V Y+ LL
Sbjct: 71 TVFDGMR-KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHG 129
Query: 327 YGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
+ VGK +E ++++ + R P V Y+A+I+ + ++ ++I + +S
Sbjct: 130 FCKVGKLDEALKIFDGAVKRGFVPDVVT--YNALINGFCKADKLDEAQRILQRMVSESLV 187
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
D N +++ K G D+A I+++G PN ++ TL G RE R LE+
Sbjct: 188 PDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQ 244
Query: 445 LKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEA---FVALLRQPGYRKE 495
L G K P V+ E G EA F ++LRQ GY E
Sbjct: 245 LLEKMVLNGCK---PDIVSYNALIHGLAREQ--GVSEALKLFGSVLRQ-GYEPE 292
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 150/361 (41%), Gaps = 19/361 (5%)
Query: 85 NPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSAS 144
N LG+ V N + G +++ L + +R++ A V+ M +G +
Sbjct: 41 NDMLGAGCVPNTYTYG----------YLLRSLCQAQRFEEARSVFRGMAAQG--CSPNVF 88
Query: 145 DAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYVRARMRGNAELLIDKM 202
+I + + + V A + + D V YG+LL+ + A L +M
Sbjct: 89 SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148
Query: 203 RDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST 262
+G + YNV++ + K + E + EM EKG V++YN LS +G
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
+++ +F+ M + + PN TF+ + + KMG + +A + S D V Y+
Sbjct: 209 GRVQSLFKDM-LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267
Query: 323 LLSLYGSVGKKEEVYRVW-NLYRS-VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
L+ S GK E R+ + RS V P + + Y+ +I ++ G ++ K+F E
Sbjct: 268 LMRGMCSKGKPHEAQRLLREMIRSGVGPDIVS--YNILIDGYSKSGALDHAIKLFYEIPK 325
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
D + ++ + G A F +I G P++ L G R R+ E
Sbjct: 326 SGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTE 385
Query: 441 A 441
+
Sbjct: 386 S 386
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 11/243 (4%)
Query: 206 GYAVH----SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
G VH +L YN ++ + K D V ++M G + Y+Y L S
Sbjct: 8 GSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQR 67
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
E+ VF M + +PN ++S + + +V++A E L + + V Y
Sbjct: 68 FEEARSVFRGMAA-QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFP-GVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
LLS +GK +E +++ +YR P GV Y+ +I ++ GD+ ++FEE
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVV---YNVLIDGFSKKGDMGEAYRLFEEM 183
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
L N ++S + ++G F + ++ F ++ +G PN ++ L +G + +
Sbjct: 184 LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243
Query: 439 LEA 441
+EA
Sbjct: 244 VEA 246
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 145/352 (41%), Gaps = 24/352 (6%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
S++N K G + +L LRK +V+ + R DAAI L
Sbjct: 175 SIVNGICKSGDTSLALDL------LRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228
Query: 152 LIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
+ G+ S+ Y +L+ +A + L+ M + +
Sbjct: 229 KEMETKGIKSS-------------LVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNV 275
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
+ +NV++ +++K + E + EM KGI + +YN + Q + + +L
Sbjct: 276 ITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDL 335
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M V +P+ TF+++ Y K+ +V++ + R++ R + V Y L+ + G
Sbjct: 336 M-VRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSG 394
Query: 332 KKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
K E ++ + V P V + Y ++ L G +E +IFE+ K + D +
Sbjct: 395 KLEIAEELFQEMVSLGVLPDV--MTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVM 452
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+++ K G + A F S+ +G KPN ++ + G ++ + EA
Sbjct: 453 YTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 504
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 106/271 (39%), Gaps = 50/271 (18%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
P+T+ Y +L++ Y A ++D M + + + ++ Y K+K DE
Sbjct: 308 PNTI----TYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDE 363
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ ++ ++G+ + +Y+I + G E E +F+ M V V P+ T+ +
Sbjct: 364 GMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEM-VSLGVLPDVMTYGILL 422
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----R 344
G++EKA E ++ D V Y ++ GK E+ WNL+ +
Sbjct: 423 DGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVED---AWNLFCSLPCK 479
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
V P V + Y MIS L K+G+
Sbjct: 480 GVKPNV--MTYTVMISGLC-----------------------------------KKGSLS 502
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+A + E+G +PN ++ TL H+R+
Sbjct: 503 EANILLRKMEEDGNEPNDCTYNTLIRAHLRD 533
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 125/296 (42%), Gaps = 15/296 (5%)
Query: 158 GVASAEDFFLSLPDTLKDRRVYGA---------LLNAYVRARMRGNAELLIDKMRDKGYA 208
GVAS + F L L D K + G ++N + R A ++ K+ GY
Sbjct: 74 GVASTKQFNLVL-DFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 132
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+ +N ++ + E +V+ M E G + +V +YN ++ G T +
Sbjct: 133 PDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDL 192
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
M ++ V + T+ST+ + G ++ A + +E++ V Y+ L+
Sbjct: 193 LRKMD-ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLC 251
Query: 329 SVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
GK + ++ R + P V + ++ +I + G ++ ++++E ++ S +
Sbjct: 252 KAGKWNDGVQLLKDMTSRKIIPNV--ITFNVLIDVFVKEGKLQEANELYKEMITKGISPN 309
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
N +M Y + +A + ++ P+ ++ +L +G+ + +R+ E +
Sbjct: 310 TITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/268 (16%), Positives = 115/268 (42%), Gaps = 9/268 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+N A +L+ +M + G + + YN ++ K + ++
Sbjct: 134 DTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLL 193
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M E+ ++ DV++Y+ + S G + +F+ M+ K + + T++++ K
Sbjct: 194 RKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET-KGIKSSLVTYNSLVGGLCK 252
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G+ + L+ + SR + + ++ L+ ++ GK +E ++ + + + P
Sbjct: 253 AGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISP--NT 310
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFF 410
+ Y++++ + + + L V+++ P I ++ Y K D+ F
Sbjct: 311 ITYNSLMDGYCMQNRLSEANNMLD--LMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLF 368
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRI 438
I + G N+ ++ L +G + ++
Sbjct: 369 RKISKRGLVANTVTYSILVQGFCQSGKL 396
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 93/232 (40%), Gaps = 7/232 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + +L+ Y + + L K+ +G +++ Y++++ + + + + E +
Sbjct: 344 DIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELF 403
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM G+ DV +Y I L G EK +FE ++ K +N + ++ + K
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK-MNLDIVMYTIIIEGMCK 462
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+VE A + + + + Y ++S G E + +
Sbjct: 463 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCT 522
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMS------WYVKE 400
Y+ +I + R GD+ K+ EE S S D +++ W+ KE
Sbjct: 523 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAVWWFKE 574
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 152/340 (44%), Gaps = 29/340 (8%)
Query: 102 RSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS 161
+ L KW L V E+ ++ RY++ W N S D + + K+
Sbjct: 121 KQLKKWNL---VSEILEWLRYQN------WWN-------FSEIDFLMLITAYGKLGNFNG 164
Query: 162 AEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AE LS + + Y AL+ +Y R NAE + +M+ G ++ Y +++
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 224
Query: 220 LYM---KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
++ K KE +EV + + K+ ++ D Y++ + G+ EK VF M V K
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM-VGK 283
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
V + T++++ + +V K + ++R + + D V Y L+ YG ++EE
Sbjct: 284 GVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ---PDVVSYALLIKAYGRARREEEA 340
Query: 337 YRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
V+ L V P T+ Y+ ++ + A G +E + +F+ + D M+
Sbjct: 341 LSVFEEMLDAGVRP--THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 398
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
S YV + + AE FF I +G +PN ++ TL +G+ +
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 438
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 27/299 (9%)
Query: 146 AAIQLDLIAK--VHG--VASAEDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAE 196
+AI +I K V G AE+ F +L D K D+++Y ++ Y +A A
Sbjct: 215 SAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKAR 274
Query: 197 LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
+ M KG ++ YN +M+ Y EV + +M+ I+ DV SY + + +
Sbjct: 275 KVFSSMVGKGVPQSTVTYNSLMSFE---TSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 331
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
G E+ VFE M +D V P ++ + + G VE+A+ + + RD
Sbjct: 332 GRARREEEALSVFEEM-LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR-----RD 385
Query: 317 RV-----PYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIE 369
R+ Y +LS Y + E + + + P + Y +I A+ D+E
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT--YGTLIKGYAKANDVE 443
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
M +++E+ + I +M + NF A ++ + G P+ + L
Sbjct: 444 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVL 502
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 172/431 (39%), Gaps = 50/431 (11%)
Query: 85 NPQLGSASVLNDWEKGGRSLTKWEL--------CRVVKELRKFRRYKHALEVYDWMNNRG 136
N +G D + R + KW+L C + LR R Y A +VY + G
Sbjct: 175 NILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRS-RDYSKAFDVYCEIRRGG 233
Query: 137 ERFRLSASDAAIQLDLIAKVHGVASA-EDFFLSLPDTLKDRRVYGALLNAYVRARMRGNA 195
+ + A + + LD +AK ED + +D Y ++ R A
Sbjct: 234 HKLDIFAYN--MLLDALAKDEKACQVFED--MKKRHCRRDEYTYTIMIRTMGRIGKCDEA 289
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
L ++M +G ++ + YN +M + K K D+ + S M E G R + Y+Y++ L+
Sbjct: 290 VGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNL 349
Query: 256 CGSQGSTEKMEGVFELMK--------------------VDKA-----------VNPNWTT 284
++G +++GV E+ K V +A V +
Sbjct: 350 LVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDS 409
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
+ +M G+ +A E L ++ + D + Y+ + S G + + ++ ++ +
Sbjct: 410 YMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK 469
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
P Y+ +I+S R+G+++ IFEE D N +++ K G+ D
Sbjct: 470 KDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVD 529
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNV 464
+A F + E+G P+ ++ TL E + R+ A S F K +P V
Sbjct: 530 EAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYS----LFEEMLVKGCQPNIVTY 585
Query: 465 INFFKACEEES 475
N C E++
Sbjct: 586 -NILLDCLEKN 595
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 102/219 (46%), Gaps = 9/219 (4%)
Query: 153 IAKVHGVASAEDFFL---SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
++K+ V+ A F S P +R Y ++L + A A ++ K+ +KG
Sbjct: 382 LSKLGHVSEAHRLFCDMWSFP-VKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVT 440
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
++ YN + + K+K+ + + +MK+ G D+++YNI ++S G G ++ +F
Sbjct: 441 DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIF 500
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
E ++ P+ +++++ K G V++A + ++ + D V Y L+ +G
Sbjct: 501 EELERSDC-KPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGK 559
Query: 330 VGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIG 366
+ E Y ++ L + P + Y+ ++ L + G
Sbjct: 560 TERVEMAYSLFEEMLVKGCQPNIVT--YNILLDCLEKNG 596
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 155/362 (42%), Gaps = 22/362 (6%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ V D +K ++ +++ + + + A+ +++ M G + + +Q
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ 313
Query: 150 LDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVR----ARMRGNAELLIDKMR 203
+ +AK V A F + +T + Y LLN V R+ G E+
Sbjct: 314 V--LAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEI------ 365
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGST 262
K Y + Y+ ++ K+ E + +M ++ + SY L S CG+ +
Sbjct: 366 SKRYMTQGI-YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
E +E + ++ +K V + ++T+ + K+ Q+ + +++ D Y+
Sbjct: 425 EAIEMLSKIH--EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNI 482
Query: 323 LLSLYGSVGKKEEVYRVWN-LYRS-VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
L++ +G VG+ +E ++ L RS P + + Y+++I+ L + GD++ F+E
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDI--ISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ D + +M + K + A + F ++ +G +PN ++ L + + R E
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 441 AL 442
A+
Sbjct: 601 AV 602
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 10/205 (4%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSL 169
V L K ++ H ++++ M G + + I + +V V A + F L
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYN--ILIASFGRVGEVDEAINIFEELER 505
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D D Y +L+N + A + +M++KG + Y+ +M + K + +
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEM 565
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
S+ EM KG + ++ +YNI L G T + ++ MK + + P+ T++ +
Sbjct: 566 AYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMK-QQGLTPDSITYTVLE 624
Query: 290 TMYIKMGQVEKAEESLRRVESRITG 314
++ V + +RR ++ ITG
Sbjct: 625 ----RLQSVSHGKSRIRR-KNPITG 644
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L++ +A L+ M +K + + +N ++ ++K ++ E E + +M
Sbjct: 222 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 281
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++ I D+++YN ++ +K + +FE M V K P+ T++T+ + K +V
Sbjct: 282 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM-VSKDCFPDLDTYNTLIKGFCKSKRV 340
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYH 356
E E R + R D V Y L+ G + +V+ S V P + + Y
Sbjct: 341 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI--MTYS 398
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L G +E ++F+ + D I M+ K G D F S+ +
Sbjct: 399 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 458
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLK 446
G KPN ++ T+ G +R + EA + LK
Sbjct: 459 GVKPNVVTYNTMISGLCSKRLLQEAYALLK 488
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 124/270 (45%), Gaps = 13/270 (4%)
Query: 179 YGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
YG ++N + RG+ +L L++KM + +N ++ K + D+ ++
Sbjct: 152 YGVVVNGLCK---RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 208
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM+ KGIR +V +Y+ +S S G + M ++K +NPN TF+ + ++K
Sbjct: 209 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKE 267
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLS---LYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G+ +AE+ + R D Y+ L++ ++ + K ++++ + + + FP +
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE-FMVSKDCFPDLDT 326
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I + +E ++F E D ++ +G+ D A+ F
Sbjct: 327 --YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ +G P+ ++ L +G ++ +AL
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKAL 414
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 122/262 (46%), Gaps = 9/262 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+LLN Y + +A L+D+M + GY ++ + ++ + E ++V M ++
Sbjct: 84 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 143
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G + ++ +Y + ++ +G + + M+ K + + F+T+ K V+
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDD 202
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAM 358
A + +E++ + V Y L+S S G+ + ++ + + + + P + ++A+
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT--FNAL 260
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEE 416
I + + G EK+ ++ +K S DP I N +++ + DKA+ F ++ +
Sbjct: 261 IDAFVKEGKFVEAEKLHDDM--IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318
Query: 417 GGKPNSTSWETLAEGHIRERRI 438
P+ ++ TL +G + +R+
Sbjct: 319 DCFPDLDTYNTLIKGFCKSKRV 340
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 98/241 (40%), Gaps = 2/241 (0%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F+ D D Y L+ + +++ + L +M +G ++ Y ++
Sbjct: 314 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 373
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ D + + +M G+ D+ +Y+I L + G EK VF+ M+ + + +
Sbjct: 374 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KSEIKLDIYIY 432
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+TM K G+V+ + + + + V Y+ ++S S +E Y + +
Sbjct: 433 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 492
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
P + Y+ +I + R GD ++ E S + D L+ + + +G DK
Sbjct: 493 DGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM-LHDGRLDK 551
Query: 406 A 406
+
Sbjct: 552 S 552
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 5/254 (1%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A + D M +G+ +S Y ++ Y ++ ++ M GI+ D Y +NI +
Sbjct: 327 ARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIG 386
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+ G + +F M+ + +NP+ T+ + +G+V+ A R+ S
Sbjct: 387 TYTKHGKVDDAMLLFSKMR-RQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLT 445
Query: 315 RDRVPYHYLLSLYGSVGK--KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
D V + L+ + K K E V + R + P N+ ++ +++ L + G + +
Sbjct: 446 PDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICP--NNIFFNTLLNHLCKEGMVARAK 503
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
IF+ + V D N ++ Y G D+A ++ +G KPN ++ T+ G+
Sbjct: 504 NIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGY 563
Query: 433 IRERRILEALSCLK 446
+ RI +A S +
Sbjct: 564 CKNGRIEDAFSLFR 577
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 105/234 (44%), Gaps = 7/234 (2%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AE L +M +G +++ +N ++ K +++ M ++ DV +YN +
Sbjct: 467 AEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLID 526
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
G ++ + E M +D V PN T++TM Y K G++E A R++ S+
Sbjct: 527 GYCLHGKVDEAAKLLEGMVLD-GVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVN 585
Query: 315 RDRVPYHYLL-SLYGS--VGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
V Y +L L+ + +E+Y +W + + + Y+ ++ L + +
Sbjct: 586 PGIVTYSTILQGLFQARRTAAAKELY-LWMIKSGIKFDIGT--YNIILLGLCQNNCTDDA 642
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
+IF+ + + R N+M+ +K G D+A+ F S++ G PN ++
Sbjct: 643 LRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 696
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 109/263 (41%), Gaps = 6/263 (2%)
Query: 170 PDTLKDRRVYGALLNAYVR-ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
PD + Y ++N +R R A L D+M D+G + + YN +++ K + D
Sbjct: 200 PDVVS----YNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMD 255
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ ++ M + G + ++N L S G GVF+ M D V P+ T++T+
Sbjct: 256 KAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRD-GVEPDVFTYNTL 314
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
K G+ +A + + R + Y LL Y + G +++ + ++
Sbjct: 315 MGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGI 374
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ ++ +I + + G ++ +F + + D ++M G D A A
Sbjct: 375 QPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMA 434
Query: 409 FFNSIIEEGGKPNSTSWETLAEG 431
F +I EG P++ + L G
Sbjct: 435 QFGRLISEGLTPDAVVFRNLIHG 457
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 153/351 (43%), Gaps = 29/351 (8%)
Query: 105 TKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAED 164
+K+ + ++ K LE+++ M + +R S + +D + K + AE
Sbjct: 178 SKFMYGKAIQAAVKLSDVGKGLELFNRMKH--DRIYPSVFIYNVLIDGLCKGKRMNDAEQ 235
Query: 165 FFLSLPDTLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP----Y 214
F D + RR+ Y L++ Y +A GN E K+R++ A H P +
Sbjct: 236 LF----DEMLARRLLPSLITYNTLIDGYCKA---GNPEKSF-KVRERMKADHIEPSLITF 287
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV 274
N ++ K ++ E+++ EMK+ G D ++++I S E GV+E V
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE-TAV 346
Query: 275 DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS----V 330
D V N T S + K G++EKAEE L R ++ + V Y+ ++ Y V
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 331 GKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
G + ++ + + + P +L Y+ +I +G++E EK + S
Sbjct: 407 GARMKIEAMEK--QGMKP--DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N+++ Y ++ FDK + + G PN S+ TL + ++LEA
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 7/298 (2%)
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMR 192
R E S+ + LD + K + FL++ D + +YG + A V+
Sbjct: 136 RNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDV 195
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
G L ++M+ YNV++ K K ++ E + EM + + + +YN
Sbjct: 196 GKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+ G+ EK V E MK D + P+ TF+T+ K G VE AE L+ ++
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADH-IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA--MISSLARIGDIEG 370
D + L Y S K E V+ +V GV Y ++++L + G IE
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYE--TAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
E+I ++ + I N M+ Y ++G+ A ++ ++G KP+ ++ L
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 135/309 (43%), Gaps = 11/309 (3%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLS--LPDTLKDRRVYGAL 182
AL VY+ + G +++A +I L+ + K + AE+ + + +Y +
Sbjct: 338 ALGVYETAVDSG--VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTM 395
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
++ Y R A + I+ M +G L YN ++ + ++ E + E V++MK KG+
Sbjct: 396 IDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEK 300
V +YNI + G G + + F+++K D PN ++ T+ K ++ +
Sbjct: 456 SPSVETYNILI---GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 301 AEESLRRVESR-ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
A+ R +E R ++ + R+ Y+ L+ S GK E+ +R + + Y+ +I
Sbjct: 513 AQIVKRDMEDRGVSPKVRI-YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
L+ G + E + E D N ++S Y GN + A + + G K
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 420 PNSTSWETL 428
P ++ L
Sbjct: 632 PTLKTYHLL 640
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 5/159 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++ AE L+ ++ KG YN +++ Y ++ EM
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K GI+ + +Y++ +S C +G E E +F M ++ P+ ++ + Y G
Sbjct: 626 KRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM----SLKPDLLVYNGVLHCYAVHGD 680
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
+EKA +++ + G D+ Y+ L+ VGK EV
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 719
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 5/247 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+D+MRDKG A + YNV++ + D+ + + G + SYNI L
Sbjct: 3 LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+ E E + E M K PN TF+ + + + G VE A E L ++ +
Sbjct: 63 TAERWEDAEKLMEEM-AHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
+ Y+ LL + K ++ L R +P + + Y+ ++++L R G+++ +
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVS--YNTLLTALCRNGEVDVAIDLL 179
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+ S N ++ K G +A + +I +G +P+ ++ T+A G RE
Sbjct: 180 HQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCRE 239
Query: 436 RRILEAL 442
+I EA+
Sbjct: 240 DKIEEAI 246
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 137/327 (41%), Gaps = 16/327 (4%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYVRARMRGNAELLIDKMRDK 205
+ L+ I + V A +F +LP + Y +L A +AE L+++M K
Sbjct: 21 VVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHK 80
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G + + +N++++ + + ++ ++ + G + SYN L + Q +K
Sbjct: 81 GCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA 140
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
ELM V + P+ +++T+ T + G+V+ A + L +++ + + Y+ ++
Sbjct: 141 MAFVELM-VSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVID 199
Query: 326 LYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
GK +E + + + + + P + + Y + S L R IE + F + +
Sbjct: 200 GLTKAGKTKEALELLDEMISKGLQPDI--ITYTTIASGLCREDKIEEAIRTFCKVQDMGI 257
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA-----EGHIRERRI 438
+ N ++ K A F+ +I G PN +++ L EG ++E R
Sbjct: 258 RPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARD 317
Query: 439 LEALSCLKGA----FAAEGAKSWRPKP 461
L C +G F +GA P
Sbjct: 318 LLGQLCSRGVVNKKFMKKGAVKMLDGP 344
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 113/269 (42%), Gaps = 3/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +LN + +A ++ + G +++ YN+++ + +++ E ++
Sbjct: 15 DIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLM 74
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK-AVNPNWTTFSTMATMYI 293
EM KG +V ++N+ +S +G E V E ++ K PN +++ + +
Sbjct: 75 EEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLE--QIPKYGCTPNSLSYNPLLHAFC 132
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K +++KA + + SR D V Y+ LL+ G+ + + + + +
Sbjct: 133 KQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLI 192
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ +I L + G + ++ +E +S D + S +E ++A F +
Sbjct: 193 SYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKV 252
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ G +P + + G + R A+
Sbjct: 253 QDMGIRPTVVLYNAILLGLCKRRETHNAI 281
>gi|399216092|emb|CCF72780.1| unnamed protein product [Babesia microti strain RI]
Length = 1520
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 127/277 (45%), Gaps = 7/277 (2%)
Query: 178 VYGALLNAYVRARMRGNA-ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
YG + +A V M A LL D ++ +++ Y+ ++ + + K+ ++ ++
Sbjct: 980 TYGCMFDALVSNNMLDEALSLLKDMKKNSNIKPNTIIYSTLIKGFGQTKQLNKALNIYLT 1039
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M ++G+ + +YN + +C G K + E M ++ + P+ TFST+ Y
Sbjct: 1040 MLDEGVVPNTITYNSIIDACARVGDMNKAANLLEDM-LNNNIEPDLITFSTVIKGYCVQS 1098
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++++ + LR + R D + Y+ LL G+ ++W+ + +N
Sbjct: 1099 NMDRSLQLLRAMSERGIKPDGILYNSLLDGCVKSGRPWLCQQLWDEMQENGIAPSNFTLT 1158
Query: 357 AMISSLARIGDIEGMEKIFEEW---LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+I R+G ++ ++ +E ++++ + + +MS + G + A FN +
Sbjct: 1159 ILIKMYGRLGQLDKAFQLMDELPRKYNIQT--NTHVYTCLMSACITNGKYKMALDVFNCM 1216
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFA 450
G P+S ++ET+ G I+ R + + + +K A+
Sbjct: 1217 NGNGIVPDSKTYETIIFGAIKGRLLYQVIDIIKAAYT 1253
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/228 (17%), Positives = 103/228 (45%), Gaps = 7/228 (3%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
Y+ ++ ++I D + V++ K+ G D+ +Y + + S + + ++ M
Sbjct: 910 YSAILDACIRINSPDHLLESVNKYKKFGFHPDLQTYGLLIKFFSSSDNVMECFHLWNEMT 969
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR-DRVPYHYLLSLYGSVGK 332
N T+ M + +++A L+ ++ + + + Y L+ +G +
Sbjct: 970 SLYGYELNEVTYGCMFDALVSNNMLDEALSLLKDMKKNSNIKPNTIIYSTLIKGFG---Q 1026
Query: 333 KEEVYRVWNLYRSVFP-GVT--NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+++ + N+Y ++ GV + Y+++I + AR+GD+ + E+ L+ D
Sbjct: 1027 TKQLNKALNIYLTMLDEGVVPNTITYNSIIDACARVGDMNKAANLLEDMLNNNIEPDLIT 1086
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
+ ++ Y + N D++ ++ E G KP+ + +L +G ++ R
Sbjct: 1087 FSTVIKGYCVQSNMDRSLQLLRAMSERGIKPDGILYNSLLDGCVKSGR 1134
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 78/174 (44%), Gaps = 6/174 (3%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+P+T+ Y ++++A R A L++ M + + ++ ++ Y D
Sbjct: 1046 VPNTI----TYNSIIDACARVGDMNKAANLLEDMLNNNIEPDLITFSTVIKGYCVQSNMD 1101
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
++ M E+GI+ D YN L C G + +++ M+ + + P+ T + +
Sbjct: 1102 RSLQLLRAMSERGIKPDGILYNSLLDGCVKSGRPWLCQQLWDEMQ-ENGIAPSNFTLTIL 1160
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRV-PYHYLLSLYGSVGKKEEVYRVWN 341
MY ++GQ++KA + + + + + Y L+S + GK + V+N
Sbjct: 1161 IKMYGRLGQLDKAFQLMDELPRKYNIQTNTHVYTCLMSACITNGKYKMALDVFN 1214
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 164/393 (41%), Gaps = 40/393 (10%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
A LN+ G + + ++ +L KF + A +Y M N G + L + I
Sbjct: 190 ADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI-- 247
Query: 151 DLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
++++K V AE + D D Y +L+ + R R A + D+M +G
Sbjct: 248 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 307
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+S+ Y+ ++ DE M+ EM EKGI VY+Y + +++ + E+ +
Sbjct: 308 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 367
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
MK + PN T++ + + ++G++E A ++ + V Y+ L++
Sbjct: 368 VARMK-KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 426
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS----- 383
G+ ++++ Y+ +I L GDIE +FE+ L +
Sbjct: 427 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 486
Query: 384 SYD---------------PRIANLM---------------MSWYVKEGNFDKAEAFFNSI 413
+Y+ R+ +LM +S + K G + A +F +
Sbjct: 487 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 546
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+E G PN S+ TL +GH ++ ++ ALS L+
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLE 579
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 144/359 (40%), Gaps = 12/359 (3%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ-LDLIAKVHGVASAEDFFLSLP 170
++ EL R+ AL+++ WM G + I+ L L + + L +
Sbjct: 421 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM- 479
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
L Y L+N Y+ NA L+D M++ G YN +++ + K + +
Sbjct: 480 GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESA 539
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
EM E G+ + SY + G + + E M+ + NPN +++ +
Sbjct: 540 SFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME-EMGCNPNVESYNAVIN 598
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFP 348
K + +AE+ ++ + + + Y L+ G+ + +++++ R P
Sbjct: 599 GLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 658
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ Y ++I L + G + E + +E + D ++ +V G D A
Sbjct: 659 NLYT--YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFL 716
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINF 467
+++ G KPN ++ L +G +E +LE K A E S+ P +V NF
Sbjct: 717 LLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEE----KVAVQHEAVYSFSPHEKDV-NF 770
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 118/285 (41%), Gaps = 33/285 (11%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L + Y +L+ + AE+L+ +M KG A + + ++ ++ + D
Sbjct: 657 LPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFL 716
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGST----EKM----EGVFELMKVDKAVN----- 279
++ M + G + + +Y++ L G Q EK+ E V+ +K VN
Sbjct: 717 LLRRMVDVGCKPNYRTYSVLLK--GLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVS 774
Query: 280 ------------PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
P T+ST+ + + G+ +AE+ ++ ++ R DR Y+ LL +
Sbjct: 775 NLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAH 834
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLG---YHAMISSLARIGDIEGMEKIFEEWLSVKSS 384
K EV ++ S+ L Y A+I +L + G +E + +F+ L + +
Sbjct: 835 C---KNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWN 891
Query: 385 YDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
D + +++ +KEG D + + + PN ++ L
Sbjct: 892 ADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILG 936
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL----SLYGSVGKKEEVYRV 339
F+ + I M + + EE +RRV + + + + L +L + K E V
Sbjct: 165 VFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGA 224
Query: 340 WNLYRSVF-PGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
NLY+ + G+ + L ++ +I+ L++ G + E I + S D ++
Sbjct: 225 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 284
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ + N D A F+ +++EG PNS ++ TL G E R+ EAL L+
Sbjct: 285 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLE 334
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 127/298 (42%), Gaps = 45/298 (15%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ + + A L+++M + G + YN ++ K + E E + +M
Sbjct: 558 YTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMA 617
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E+G+ +V +Y + G T+ +F M+ K + PN T+S++ + G+
Sbjct: 618 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL-PNLYTYSSLIYGLCQEGKA 676
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV-TNLGYHA 357
++AE L+ +E + D V + L+ + +G+ + + + L R V G N ++
Sbjct: 677 DEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLL--LRRMVDVGCKPNYRTYS 734
Query: 358 MISSLARIGDIEGMEK---IFEEWLSVKS----SYDPR--------IANLM--------- 393
++ ++G++K + EE ++V+ S+ P ++NL+
Sbjct: 735 VL--------LKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCE 786
Query: 394 ---------MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+S ++G F +AE + E G P+ + +L H + + AL
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHAL 844
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 118/253 (46%), Gaps = 2/253 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEM 237
+ AL++AY R+ A + D M+ G + + YN ++ K E+ +V + M
Sbjct: 228 FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGM 287
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G++ D ++N L+ C G E +F M VDK ++ + T++T+ K GQ
Sbjct: 288 LSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAM-VDKGIDQDIFTYNTLLDAVCKGGQ 346
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
++ A E + + ++ + V Y ++ Y VG+ ++ ++N + + G+ + Y+
Sbjct: 347 MDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNT 406
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++S A++G E + +E + D N +++ Y K+ +D+ F +
Sbjct: 407 LLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGR 466
Query: 418 GKPNSTSWETLAE 430
PN ++ TL +
Sbjct: 467 VSPNLLTYSTLID 479
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 134/319 (42%), Gaps = 48/319 (15%)
Query: 122 YKHALEVYDWMNNRG---ERFRLSASDAAIQLDLIAKVHGV-ASAEDFFLSLPDTLKDRR 177
+K +E++D M + G +R ++ L + G+ +A F ++ D D+
Sbjct: 277 FKKVVEIFDGMLSNGVQPDRITFNS------LLAVCSRGGLWEAARRLFSAMVDKGIDQD 330
Query: 178 V--YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ Y LL+A + A ++ +M K + + Y+ M+ Y K+ D+ +M +
Sbjct: 331 IFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFN 390
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EMK G+ LD SYN T+ ++Y K+
Sbjct: 391 EMKFLGVGLDRVSYN------------------------------------TLLSVYAKL 414
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G+ E+A + + +E+ +D V Y+ LL+ YG + +EV RV+ + L Y
Sbjct: 415 GRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTY 474
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+I ++ G + ++F E+ D + + ++ K G + + + + +
Sbjct: 475 STLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTK 534
Query: 416 EGGKPNSTSWETLAEGHIR 434
EG +PN ++ ++ + R
Sbjct: 535 EGIRPNVVTYNSIIDAFGR 553
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 108/246 (43%), Gaps = 6/246 (2%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ + D +GY ++ +++ Y + +E + MK G+ ++ +YN +
Sbjct: 209 AKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVID 268
Query: 255 SCGSQG-STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRIT 313
+CG G +K+ +F+ M + V P+ TF+++ + + G E A + +
Sbjct: 269 ACGKGGVEFKKVVEIFDGM-LSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGI 327
Query: 314 GRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
+D Y+ LL G+ + + + + +++ P V Y MI A++G ++
Sbjct: 328 DQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVT--YSTMIDGYAKVGRLDDA 385
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+F E + D N ++S Y K G F++A + G + + ++ L G
Sbjct: 386 LNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAG 445
Query: 432 HIRERR 437
+ ++ R
Sbjct: 446 YGKQYR 451
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 102/240 (42%), Gaps = 16/240 (6%)
Query: 215 NVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV 274
+ M++ ++ + + +++ ++G VY+++ +S+ G G + VF+ MK
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMK- 252
Query: 275 DKAVNPNWTTFSTMATMYIKMG-QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ PN T++ + K G + +K E + S DR+ ++ LL++ G
Sbjct: 253 SNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGG-- 310
Query: 334 EEVYRVWNLYRSVFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
+W R +F + + G Y+ ++ ++ + G ++ +I E + +
Sbjct: 311 -----LWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPN 365
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ M+ Y K G D A FN + G + S+ TL + + R +AL K
Sbjct: 366 VVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCK 425
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Query: 249 YNIWLSSCGSQGSTEKMEGVFEL-MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
Y L G++G + K FE ++ + N S M + ++G+VE A+
Sbjct: 156 YTFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDT 215
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARI 365
G+ + L+S YG G E +V++ +S + P + Y+A+I + +
Sbjct: 216 ALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVT--YNAVIDACGKG 273
Query: 366 G-DIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
G + + + +IF+ LS D N +++ + G ++ A F++++++G + +
Sbjct: 274 GVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFT 333
Query: 425 WETLAEG 431
+ TL +
Sbjct: 334 YNTLLDA 340
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 152/356 (42%), Gaps = 15/356 (4%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S SVL K G L ++K L K +L +D + +G F++ I
Sbjct: 64 SFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQG--FQMDQVSYGIL 121
Query: 150 LDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
L+ + K+ A ++ D T D +Y +++ + ++ A L +M +G
Sbjct: 122 LNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGI 181
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ Y ++ + + E +++EM K I ++Y+YN + + +G ++ +
Sbjct: 182 FPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKN 241
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ +M K V P+ +S + Y +G+V+KA++ + TG + Y Y + +
Sbjct: 242 LLAVM-TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQ--TGVNPDVYSYNIIIN 298
Query: 328 GSVGKKEEVYRVWNLYR-----SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
G + K + V NL R ++ P Y ++I L ++G I + + +E
Sbjct: 299 G-LCKGKRVDEAMNLLREMLHKNMIPDTVT--YSSLIDGLCKLGRITTILDLTKEMHHRG 355
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+ N ++ K N DKA A F + E G +PN ++ L +G + R+
Sbjct: 356 QPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRL 411
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 117/256 (45%), Gaps = 13/256 (5%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ + ++ L+ M KG + Y+++M Y + E + + + M
Sbjct: 223 YNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMV 282
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G+ DVYSYNI ++ C + E M + E++ K + P+ T+S++ K+G+
Sbjct: 283 QTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLH--KNMIPDTVTYSSLIDGLCKLGR 340
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTN 352
+ + + + R + V Y+ SL + K + + + L+ R + P
Sbjct: 341 ITTILDLTKEMHHRGQPANLVTYN---SLLDGLCKNQNLDKAIALFMKMKERGIQP--NK 395
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y A+I L + G ++ + +F+ L D +M+S KEG FD+A A +
Sbjct: 396 YTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSK 455
Query: 413 IIEEGGKPNSTSWETL 428
+ + G PN+ ++E +
Sbjct: 456 MEDNGCIPNAVTFEII 471
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 121/297 (40%), Gaps = 51/297 (17%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ YG LLN + A L+ + D+ + Y+ ++ K K DE +
Sbjct: 114 DQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLY 173
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMY 292
SEM +GI DV +Y + CG + + ME F L+ + K +NPN T++T+
Sbjct: 174 SEMNARGIFPDVITYTTLI--CGFCLAGQLMEA-FGLLNEMILKNINPNIYTYNTLIDTL 230
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K G+V++++ L + + D V Y L+ Y
Sbjct: 231 CKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGY------------------------- 265
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFF 410
+G+++ ++IF + V++ +P + N++++ K D+A
Sbjct: 266 ----------CLVGEVQKAKQIF--LVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLL 313
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINF 467
++ + P++ ++ +L +G + RI L K R +P N++ +
Sbjct: 314 REMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTK-------EMHHRGQPANLVTY 363
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 13/245 (5%)
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM-KVDK-AVN 279
+K+K Y V S+ +M+ KGI D+ + +I ++ G +M F ++ K+ K
Sbjct: 21 VKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLG---QMAFSFSVLGKILKLGYQ 77
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
PN +T+ G+V+K+ +V ++ D+V Y LL+ +G+ ++
Sbjct: 78 PNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKL 137
Query: 340 WNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
RS P V Y +I L + ++ ++ E + D ++ +
Sbjct: 138 LRTIEDRSTRPDVVM--YSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGF 195
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSW 457
G +A N +I + PN ++ TL + +E ++ E+ K A K
Sbjct: 196 CLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKES----KNLLAVMTKKGV 251
Query: 458 RPKPV 462
+P V
Sbjct: 252 KPDVV 256
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K R L++ M++RG+ L ++ LD + K + A F+ + +
Sbjct: 331 LIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSL--LDGLCKNQNLDKAIALFMKMKE 388
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
++ Y AL++ + + L + KGY + Y VM++ K +DE
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDE 448
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
+M S+M++ G + ++ I + S + +K E + M + K + P
Sbjct: 449 ALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEM-IAKGLLP 498
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PDT+ Y +L++ + L +M +G + + YN ++ K + D
Sbjct: 322 IPDTV----TYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLD 377
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ ++ +MKE+GI+ + Y+Y + G +K + +F+ + V W T++ M
Sbjct: 378 KAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVW-TYTVM 436
Query: 289 ATMYIKMGQVEKA 301
+ K G ++A
Sbjct: 437 ISGLCKEGMFDEA 449
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 5/249 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ Y M A + +MR+KG A + YN+++ + K++ E +V ++
Sbjct: 266 YNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G+ ++ +YNI ++ G + +F +K ++P T++T+ Y K+ +
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK-SSGLSPTLVTYNTLIAGYSKVENL 384
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYH 356
A + ++ +E R R +V Y L+ + + ++ + +L + P V Y
Sbjct: 385 AGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYT--YS 442
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I G+++ K F+ + + I N M+ Y KEG+ +A N ++
Sbjct: 443 VLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHS 502
Query: 417 GGKPNSTSW 425
G PN S+
Sbjct: 503 GMVPNVASF 511
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 118/258 (45%), Gaps = 10/258 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y A++NAYV + A + M +G+A S +N ++ L ++ +D+ + + +
Sbjct: 91 LYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVL 150
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--DKAVNPNWTTFSTMATMYIKM 295
K K + L+ YS+ I ++ C G + VF L+ V + ++PN ++T+ K
Sbjct: 151 KSK-VVLNAYSFGIMITGCCEAGYFVR---VFRLLAVLEEFGLSPNVVIYTTLIDGCCKN 206
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRS-VFPGVTNL 353
G V A+ +++ ++ Y L++ + G + E ++++ N+ RS + P
Sbjct: 207 GDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNA--Y 264
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ +IS G ++ K+F E + N+++ + F +A + +
Sbjct: 265 AYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324
Query: 414 IEEGGKPNSTSWETLAEG 431
+ G PN ++ L G
Sbjct: 325 NKVGLSPNIVTYNILING 342
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 130/322 (40%), Gaps = 41/322 (12%)
Query: 159 VASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
+A E+F LS P+ + +Y L++ + A+ L KM G + Y+V+M
Sbjct: 181 LAVLEEFGLS-PNVV----IYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLM 235
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
+ K E M M GI + Y+YN +S + G +K VF M+ +K +
Sbjct: 236 NGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMR-EKGI 294
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
T++ + + + +A + + +V + V Y+ L++ + VGK + R
Sbjct: 295 ACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVR 354
Query: 339 VWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW-------------------- 378
++N +S T + Y+ +I+ +++ ++ G + +E
Sbjct: 355 LFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFA 414
Query: 379 -------------LSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
L KS P + ++++ GN +A F S+ E +PNS
Sbjct: 415 RLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSV 474
Query: 424 SWETLAEGHIRERRILEALSCL 445
+ T+ G+ +E AL L
Sbjct: 475 IYNTMIHGYCKEGSSYRALRLL 496
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 157/393 (39%), Gaps = 47/393 (11%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S +L++ G++ + +V+ L K RR HA ++D M G D +
Sbjct: 99 SLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHH-----PDRLMF 153
Query: 150 LDLI---AKVHGVASAEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD 204
+LI + V A + F +P + VY LL+ + A L +M+
Sbjct: 154 YELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKS 213
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
+ + YN ++ K + +E + M+ G +V +++ + G EK
Sbjct: 214 HSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEK 273
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
VF M ++ PN T++T+ + + +V +A E ++ D V Y+ L+
Sbjct: 274 ALEVFGSM-LEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 332
Query: 325 SLY---GSVGKKEEVYRVWN----------LYRSVFPGVTNLG----------------- 354
+ Y GS+ + E++YR + + ++ G LG
Sbjct: 333 AGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGL 392
Query: 355 ------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
Y +I+ L+R ++ +++++ K DP + K GN D+A A
Sbjct: 393 AADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYA 452
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F + + G PN ++ L+E I+ R+ +A
Sbjct: 453 VFEATRKSGAVPNPETFRILSESLIKLGRVEDA 485
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 119/269 (44%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + ++ + R+ A + M + GY ++ Y++++ KI + DE ++
Sbjct: 44 DVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKIL 103
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM +G + +Y+ + + + +F+ M + +P+ F + +
Sbjct: 104 SEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEM-IRGGHHPDRLMFYELILGLCQ 162
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+V+ A E +++ + Y+ LL S G+ E+ ++ +S +
Sbjct: 163 AGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVT 222
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNS 412
Y+ ++ ++ + +E K+FE + + Y P + ++ + G +KA F S
Sbjct: 223 YNTLLDAVCKARRVEEGCKLFEAMRA--AGYVPNVITFSTLIHGLCRTGELEKALEVFGS 280
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
++E G KPN ++ TL G R ++++A
Sbjct: 281 MLEAGCKPNKYTYTTLISGLCRAEKVIQA 309
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M++K I +V++Y+ + S + E+ V E M + NP+ F+ + + +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEM-MAAGCNPDVFAFNGVMQGFARSN 59
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
+EKA E + + D V YH L+ +GK +E ++ + + R P +
Sbjct: 60 NMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQ--A 117
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +++ +LA+ ++ +F+E + D + ++ + G A F +
Sbjct: 118 YSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMP 177
Query: 415 EEGGKPNSTSWETLAEG 431
+ G +PN + L G
Sbjct: 178 KHGCQPNVPVYNVLLHG 194
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%)
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y ++I SL + E K+ EE ++ + D N +M + + N +KA + ++
Sbjct: 13 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCL 445
E G KP++ S+ L G + ++ E+L L
Sbjct: 73 ESGYKPDNVSYHILIHGLAKIGKLDESLKIL 103
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 154/392 (39%), Gaps = 53/392 (13%)
Query: 94 LNDWEKGGRSLTKW-------ELCRVVKELRKFRRYKHALEVYDWM-NNRGERFRLSASD 145
LN WE L W ++ E+ + +H+L V++WM N + R R +
Sbjct: 32 LNHWEDIDGVLNCWLGRFNRKNFPALISEITRTGALEHSLRVFNWMKNQKCYRARTDIYN 91
Query: 146 AAIQL-----------------------------DLIAKVHGVASAEDFFLSLPDTL--- 173
I L + + VHG A + L + D +
Sbjct: 92 CMIWLHARHQRADQARGLFYEMKVWRCKPDVETYNALMNVHGRAGQWRWALQIFDDMLQA 151
Query: 174 -----KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
R Y L+NA + A + +M D G + YN++++ + +
Sbjct: 152 PKPIAPSRSSYNNLINACGSSGQWFKALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPR 211
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ + K + LD YS+NI L+ G E +F+ M+ P+ TF+ +
Sbjct: 212 HAVAYYDHLISKKVPLDRYSHNIILNCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFNAL 271
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-RSVF 347
+Y GQ+ KA+E+ + V ++ LL Y S G E +V L ++ F
Sbjct: 272 LHVYALCGQITKAQETFDMMIGEGMAPTIVTFNTLLGAYASQGMYTEALQVVGLLVKAKF 331
Query: 348 -PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFD 404
P V + Y +++++ + G E +++F+ L + S P + N +M Y G ++
Sbjct: 332 EPDVVS--YSSLLNAFGKAGYPEKAQEVFD--LMKQRSRKPNLVTFNGLMDAYASAGKYE 387
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+A + + E +PN + +L R R
Sbjct: 388 RARELLHDMAEARIEPNVVTICSLFAACARAR 419
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 141/322 (43%), Gaps = 25/322 (7%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRD-KGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
+R+ + AL++ R ++ + + M++ K Y + YN M+ L+ + + D+ +
Sbjct: 50 NRKNFPALISEITRTGALEHSLRVFNWMKNQKCYRARTDIYNCMIWLHARHQRADQARGL 109
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTFSTMATMY 292
EMK + DV +YN ++ G G +F ++++ K + P+ ++++ +
Sbjct: 110 FYEMKVWRCKPDVETYNALMNVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINAC 169
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
GQ KA E +R+ G D + Y+ +LS + S G+ ++ S +
Sbjct: 170 GSSGQWFKALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDR 229
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFF 410
++ +++ L ++G E +F+E + +P + N ++ Y G KA+ F
Sbjct: 230 YSHNIILNCLTKLGRFEDAINLFKEMRKMNGC-EPDVVTFNALLHVYALCGQITKAQETF 288
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA 470
+ +I EG P ++ TL GA+A++G + + + V+
Sbjct: 289 DMMIGEGMAPTIVTFNTLL-----------------GAYASQGMYT---EALQVVGLLVK 328
Query: 471 CEEESDMGSKEAFVALLRQPGY 492
+ E D+ S + + + GY
Sbjct: 329 AKFEPDVVSYSSLLNAFGKAGY 350
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 118/260 (45%), Gaps = 10/260 (3%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y +LLNA+ +A A+ + D M+ + + + +N +M Y +Y+
Sbjct: 333 PDVVS----YSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYER 388
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ +M E I +V + ++C EK+ VF KV + + N F+
Sbjct: 389 ARELLHDMAEARIEPNVVTICSLFAACARARCPEKVRDVFHEAKV-RQIALNVPAFNAAI 447
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
T YI+ GQ ++A+ L +E + + V + L++ GS+G E +++ +
Sbjct: 448 TAYIEAGQFDEAKALLEVMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIP 507
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD-PRIANLMMSWYVKEGNFDKAEA 408
+T A+I++ A+ G IF++ + +LM+++ + +D A+
Sbjct: 508 LTVEPCSALINAFAKHGMYNEARTIFDDMRKAGCKANVVTYTSLMIAYRM----YDDAQL 563
Query: 409 FFNSIIEEGGKPNSTSWETL 428
++ G P+S ++ TL
Sbjct: 564 ACEEMVAAGITPDSIAFGTL 583
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 118/258 (45%), Gaps = 5/258 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+ A ++ A ++D M KG + YN M+ +K + DE ++
Sbjct: 374 DVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELL 433
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M+ G++ +SY +++ G G K FE MK + + P+ + +
Sbjct: 434 ENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMK-KRGIMPSIAACNASLYTLAE 492
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G++ +AE+ + D V Y+ L+ Y G+ ++ ++ + + + P V
Sbjct: 493 TGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMI 552
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ +++I++L + G ++ K+F ++K + N++++ KEG KA F S
Sbjct: 553 I--NSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGS 610
Query: 413 IIEEGGKPNSTSWETLAE 430
+ E G PN+ ++ +L +
Sbjct: 611 MTESGCPPNTITFNSLLD 628
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 9/264 (3%)
Query: 170 PDTLKDRRVYGALLNAY-----VRARMRG--NAELLIDK-MRDKGYAVHSLPYNVMMTLY 221
P L+ G +LNAY + + G N L + K M +G Y+ +M
Sbjct: 186 PFALRKMTEVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVAL 245
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
+ + ++ +++ EMK G+R ++Y+Y I + + G + G+F+ M D+ P+
Sbjct: 246 GRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMD-DEGCGPD 304
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
T++ + G+++KA+E ++ + DRV Y L+ +G VG E V R WN
Sbjct: 305 VITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWN 364
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ Y +I +L + GD++ + + + + N M+ +K
Sbjct: 365 EMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKAR 424
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSW 425
D+A ++ G KP + S+
Sbjct: 425 RLDEALELLENMESLGVKPTAFSY 448
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 117/254 (46%), Gaps = 2/254 (0%)
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
G A + KM + G+ +++ YN ++ L + +E + M +G++ + +Y+
Sbjct: 183 GRAPFALRKMTEVGFILNAYSYNGLIHLLLP-GFCNEALKVYKRMISEGMKPSMKTYSAL 241
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+ + G +G T K+ + E MK + PN T++ + +++ A + ++
Sbjct: 242 MVALGRRGDTRKIMNLLEEMK-SIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEG 300
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
G D + Y L+ + GK ++ ++ R+ + Y ++ ++GD+E ++
Sbjct: 301 CGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVK 360
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ + E + D +++ K G+ D+A + + +G PN ++ T+ G
Sbjct: 361 RFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGL 420
Query: 433 IRERRILEALSCLK 446
++ RR+ EAL L+
Sbjct: 421 LKARRLDEALELLE 434
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 7/208 (3%)
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K GI + SYN + TEK +FE MK +PN T++ + + K +
Sbjct: 788 KNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMK-SAGTHPNNFTYNLLLDAHGKSKR 846
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG---VTNLG 354
+ K + + SR + + ++ ++S ++ K + + +LY + G T
Sbjct: 847 INKLYDLYSEMRSRGCEPNAITHNIIIS---ALVKSNNLNKALDLYYELMSGDFSPTPCT 903
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +I L + G E KIFEE L + I N++++ + K G D A F ++
Sbjct: 904 YGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMV 963
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEAL 442
+EG +P+ S+ L E RI EA+
Sbjct: 964 KEGIRPDLKSYTILVECLCITGRIDEAV 991
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 115/272 (42%), Gaps = 4/272 (1%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL--PYNVMMTLYMKIKEYDEVE 231
+D V L+ + + +A+ + DK K +H YN +M + ++
Sbjct: 758 QDDHVMLPLIKVLCKRKKALDAQNVFDKFT-KNLGIHPTLESYNCLMDGLLGSNFTEKAL 816
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ +MK G + ++YN+ L + G K+ ++ M+ + PN T + + +
Sbjct: 817 ELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMR-SRGCEPNAITHNIIISA 875
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
+K + KA + + S Y L+ G+ E+ +++ G
Sbjct: 876 LVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPN 935
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
++ Y+ +I+ + G+I+ ++F++ + D + +++ G D+A +F
Sbjct: 936 SVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFE 995
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ G P++ S+ + G + RR+ EALS
Sbjct: 996 ELKLTGLDPDTVSYNFIINGLGKSRRLDEALS 1027
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 132/319 (41%), Gaps = 40/319 (12%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKD 175
K +R ++Y M +RG +A I + + K + + A D + L D
Sbjct: 843 KSKRINKLYDLYSEMRSRG--CEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPT 900
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
YG L++ ++A A + ++M D G +S+ YN+++ + K E D +
Sbjct: 901 PCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFK 960
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+M ++GIR D+ SY I + G ++ FE +K+ ++P+ +++ + +
Sbjct: 961 KMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKL-TGLDPDTVSYNFIIN---GL 1016
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G+ + +E+L L S + G ++Y Y
Sbjct: 1017 GKSRRLDEALS----------------LFSEMKNRGISPDLYT----------------Y 1044
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+A+I L G ++ K++EE V N ++ + GN D+A + F ++
Sbjct: 1045 NALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMV 1104
Query: 416 EGGKPNSTSWETLAEGHIR 434
G PN+ ++ L + R
Sbjct: 1105 VGCSPNTETFAQLPNKYPR 1123
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 146/337 (43%), Gaps = 57/337 (16%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD 175
L K RR ALE+ + M + G + +A + +D K A A D F +T+K
Sbjct: 420 LLKARRLDEALELLENMESLG--VKPTAFSYVLFIDYYGKSGDPAKAIDTF----ETMKK 473
Query: 176 RRVYGAL--LNA--YVRARMR--GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
R + ++ NA Y A AE + + + G + S+ YN++M Y K + D+
Sbjct: 474 RGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDK 533
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++SEM KG DV M ++ +N
Sbjct: 534 ATQLLSEMISKGCEPDV-------------------------MIINSLIN---------- 558
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV--- 346
T+Y K G+V+ A + R+++ V Y+ LL+ +GK+ ++ + L+ S+
Sbjct: 559 TLY-KAGRVDAAWKMFGRLKNLKLAPTVVTYNILLT---GLGKEGKILKALELFGSMTES 614
Query: 347 -FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
P T + +++++ L++ ++ K+F + + D N ++ ++EG D
Sbjct: 615 GCPPNT-ITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDY 673
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
A FF+ +++ P+ + TL G +R R+ +A+
Sbjct: 674 AFWFFHQ-MKKFLSPDYVTLCTLIPGVVRHGRVEDAI 709
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 106/273 (38%), Gaps = 40/273 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++A A A+ L KMR ++ + Y +M + K+ + + V+
Sbjct: 304 DVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFW 363
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM+ G DV +Y I + + G ++ + ++M K + PN T++TM +K
Sbjct: 364 NEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTT-KGIFPNLHTYNTMICGLLK 422
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++++A E L +ES Y + YG G +
Sbjct: 423 ARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKA------------------ 464
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV--KEGNFDKAEAFFNS 412
I E M+K P IA S Y + G +AE FN
Sbjct: 465 ----------IDTFETMKK---------RGIMPSIAACNASLYTLAETGRISEAEDIFND 505
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ + G P+S ++ L + + + +I +A L
Sbjct: 506 LHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLL 538
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 45/254 (17%), Positives = 104/254 (40%), Gaps = 1/254 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+A+ +++ L +MR +G +++ +N++++ +K ++ + E+
Sbjct: 834 YNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELM 893
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+Y + G +E+ +FE M +D PN ++ + + K G++
Sbjct: 894 SGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEM-LDYGCGPNSVIYNILINGFGKSGEI 952
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+ A E +++ D Y L+ G+ +E + + + + Y+ +
Sbjct: 953 DFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFI 1012
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I+ L + ++ +F E + S D N ++ G D A + + G
Sbjct: 1013 INGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGL 1072
Query: 419 KPNSTSWETLAEGH 432
+P+ ++ L GH
Sbjct: 1073 EPSVFTYNALIRGH 1086
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 152/340 (44%), Gaps = 29/340 (8%)
Query: 102 RSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS 161
+ L KW L V E+ ++ RY++ W N S D + + K+
Sbjct: 114 KQLKKWNL---VSEILEWLRYQN------WWN-------FSEIDFLMLITAYGKLGNFNG 157
Query: 162 AEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AE LS + + Y AL+ +Y R NAE + +M+ G ++ Y +++
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217
Query: 220 LYM---KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
++ K KE +EV + + K+ ++ D Y++ + G+ EK VF M V K
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM-VGK 276
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
V + T++++ + +V K + ++R + + D V Y L+ YG ++EE
Sbjct: 277 GVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ---PDVVSYALLIKAYGRARREEEA 333
Query: 337 YRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
V+ L V P T+ Y+ ++ + A G +E + +F+ + D M+
Sbjct: 334 LSVFEEMLDAGVRP--THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 391
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
S YV + + AE FF I +G +PN ++ TL +G+ +
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 431
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 27/299 (9%)
Query: 146 AAIQLDLIAK--VHG--VASAEDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAE 196
+AI +I K V G AE+ F +L D K D+++Y ++ Y +A A
Sbjct: 208 SAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKAR 267
Query: 197 LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
+ M KG ++ YN +M+ Y EV + +M+ I+ DV SY + + +
Sbjct: 268 KVFSSMVGKGVPQSTVTYNSLMSFET---SYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 324
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
G E+ VFE M +D V P ++ + + G VE+A+ + + RD
Sbjct: 325 GRARREEEALSVFEEM-LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR-----RD 378
Query: 317 RV-----PYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIE 369
R+ Y +LS Y + E + + + P + Y +I A+ D+E
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT--YGTLIKGYAKANDVE 436
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
M +++E+ + I +M + NF A ++ + G P+ + L
Sbjct: 437 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVL 495
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 131/304 (43%), Gaps = 36/304 (11%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + LLNA NA L+ KM + G ++ YN ++ Y K Y ++
Sbjct: 174 DVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLI 233
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M KGI +DV +YN+++ + + K + + M+ + V PN T++T+ + +++
Sbjct: 234 DCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRN-MVYPNEITYNTLISGFVR 292
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL------------ 342
G++E A + + + + Y+ L++ + + G E R+ ++
Sbjct: 293 EGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVT 352
Query: 343 YRSVFPG-----------------------VTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
Y ++ G V+++ Y AMI L + G +E ++ ++ L
Sbjct: 353 YGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDML 412
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
V + D +++++ + + G + A+ + + G PN + TL + + +
Sbjct: 413 KVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLK 472
Query: 440 EALS 443
EAL+
Sbjct: 473 EALN 476
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 5/264 (1%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
P + V+ L+ +R RM G+A M +G N+++ +K ++ D
Sbjct: 99 PICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDM 158
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
S M KGI DV ++NI L++ +G + + M+ + V P T++T+
Sbjct: 159 FWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKME-ESGVYPTAVTYNTLL 217
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VF 347
Y K G+ + A + + + S+ G D Y+ + + + Y + R V+
Sbjct: 218 NWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVY 277
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P + Y+ +IS R G IE K+F+E + N +++ + GN +A
Sbjct: 278 P--NEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEAL 335
Query: 408 AFFNSIIEEGGKPNSTSWETLAEG 431
+ ++ G +PN ++ L G
Sbjct: 336 RLMDVMVSHGLRPNEVTYGALLNG 359
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 112/278 (40%), Gaps = 38/278 (13%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+SL + L + Y L+ + G A L+D M G + + Y ++ K E
Sbjct: 306 MSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAE 365
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTF 285
+ V S++ M+ G+R+ SY + G E+ + +++KV +VNP+ TF
Sbjct: 366 FGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKV--SVNPDVVTF 423
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
S + + ++G++ A+E + ++ + + Y L+ Y +G +E +
Sbjct: 424 SVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAY----- 478
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
V N H D N++++ + + G ++
Sbjct: 479 ---AVMNHSGHVA---------------------------DHFTCNVLVATFCRYGKLEE 508
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
AE F N + G PNS +++ + G+ L+A S
Sbjct: 509 AEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFS 546
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 123/318 (38%), Gaps = 41/318 (12%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGALLN + G ++++MR G V + Y M+ K +E ++ +M
Sbjct: 353 YGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDML 412
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG-- 296
+ + DV ++++ ++ G + + M V PN +ST+ Y KMG
Sbjct: 413 KVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLV-PNGILYSTLIYNYCKMGYL 471
Query: 297 ---------------------------------QVEKAEESLRRVESRITGRDRVPYHYL 323
++E+AE + + + V + +
Sbjct: 472 KEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCI 531
Query: 324 LSLYGSVGKKEEVYRVWNLYRSV--FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
++ YG+ G + + V++ S FP + Y ++ L G I K F +
Sbjct: 532 INGYGNSGDALKAFSVFDKMNSFGHFPSL--FTYGGLLKGLCIGGHINEALKFFHRLRCI 589
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++ D I N ++ + GN A A N ++ P++ ++ L G ++ +I+ A
Sbjct: 590 PNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAA 649
Query: 442 LSCLKGAFAAEGAKSWRP 459
L L G +G S P
Sbjct: 650 L-LLSGKAIEKGLLSPNP 666
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 115/281 (40%), Gaps = 14/281 (4%)
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M +G+ VY+ N+ L S + + F+ M + K + P+ TF+ + + G
Sbjct: 131 MGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGM-LAKGICPDVATFNILLNALCERG 189
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+ + A LR++E V Y+ LL+ Y G+ + ++ + S GV Y+
Sbjct: 190 KFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYN 249
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFNSIIE 415
I +L R + + + Y I N ++S +V+EG + A F+ +
Sbjct: 250 VFIDNLCR-DSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSL 308
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEES 475
PNS ++ TL GH I EAL L + G RP V + +
Sbjct: 309 FNLLPNSITYNTLIAGHCTTGNIGEALR-LMDVMVSHG---LRPNEVTYGALLNGLYKNA 364
Query: 476 DMGSKEAFVALLRQPGYR-KEKDYMSLI------GLTDEAV 509
+ G + + +R G R Y ++I G+ +EAV
Sbjct: 365 EFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAV 405
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/274 (17%), Positives = 115/274 (41%), Gaps = 7/274 (2%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PDT+ + +++ Y R ++ M+ K + YN+++ Y K
Sbjct: 699 PDTV----AFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMAR 754
Query: 230 VESMVSEMKEKGIRLDVYS-YNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ +M G D +S +++ L C S+ S + + + ++ V + TF+ +
Sbjct: 755 CFMLYKDMIRHGFLPDKFSWHSLILGYCQSK-SFDVAIKILRWITLEGHVIDRF-TFNML 812
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
T + + +++KA E ++++ + + Y+ L + + +RV +
Sbjct: 813 ITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGS 872
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
TN Y +I+ + R+G+I+G K+ +E ++ S + ++ + A
Sbjct: 873 VPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIW 932
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ ++E P ++ TL + +E + +AL
Sbjct: 933 VLDLMLEMQIIPTVATFTTLMHVYCKEANVAKAL 966
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 13/179 (7%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F+ +P+ Y AL N +R A ++ + + G + Y ++ ++
Sbjct: 835 FMVIPNV----DTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVG 890
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEG---VFELMKVDKAVNPN 281
+ EMK GI S+N+ +S+ +++K+E V +LM ++ + P
Sbjct: 891 NIKGAMKLQDEMKTLGIS----SHNVAMSAIVRGLANSKKIENAIWVLDLM-LEMQIIPT 945
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
TF+T+ +Y K V KA E +E D V Y+ L+S + G E ++++
Sbjct: 946 VATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLY 1004
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 134/326 (41%), Gaps = 10/326 (3%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP--DTLKDRRVY 179
+K L V+ N++G + L + I+ + K+ + A D F +P + D Y
Sbjct: 156 FKFYLHVFG-ANSKGFQPNLLTYNLIIKA--LCKLGQIDRAVDTFREMPLKNCNPDVFTY 212
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
L+N + R A L+D+M+ +G + + +NV++ K + +V M
Sbjct: 213 STLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFL 272
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
KG + +YN + +G +K + E M K V PN T+ T+ +K + E
Sbjct: 273 KGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV-PNQVTYGTIINGLVKQRRAE 331
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
L +E R + Y L+S GK E R+W + P V + Y A
Sbjct: 332 DGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNV--VVYGA 389
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
I L R + E I +E LS + + +M + K+G+ KA + ++ +
Sbjct: 390 FIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQD 449
Query: 418 GKPNSTSWETLAEGHIRERRILEALS 443
+ N L G R+ EAL+
Sbjct: 450 MRHNVVCCSVLLNGLCESGRLREALT 475
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 120/269 (44%), Gaps = 8/269 (2%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ ++ YG ++N V+ R + ++ M ++G + Y+ +++ K + +
Sbjct: 310 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 369
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EM EKG + +V Y ++ ++ E + + M + K PN T+S++
Sbjct: 370 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM-LSKGFLPNAFTYSSLMKG 428
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
+ K G +KA + + S+ + V LL+ G+ E VW L + P
Sbjct: 429 FFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPD 488
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAE 407
V + Y +MI L +G ++ K+F E + P + N++ + ++ N +A
Sbjct: 489 V--VAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAI 546
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRER 436
NS+++EG P+S + E +RER
Sbjct: 547 DLLNSMLDEGCDPDSLTCNIFLET-LRER 574
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 133/337 (39%), Gaps = 9/337 (2%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP 170
R+++ R + +V D M G L+ + + K H A +FF +
Sbjct: 70 RLIENYATSREFHFIHQVLDRMKREGRV--LTETIFILIFKACGKAHLPGEAVNFFHRMA 127
Query: 171 DTLKDRRV---YGALLNAYVRARMRGNA---ELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
+ L ++ + ++LN ++ A L + KG+ + L YN+++ K+
Sbjct: 128 NDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKL 187
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
+ D EM K DV++Y+ ++ + ++ + + M+ + + PN T
Sbjct: 188 GQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCL-PNPVT 246
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
F+ + K G + +A + + + + + V Y+ L+ GK ++ +
Sbjct: 247 FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMV 306
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S + Y +I+ L + E I + I + ++S KEG +
Sbjct: 307 SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSE 366
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A + + E+G KPN + +G R+ + EA
Sbjct: 367 NAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEA 403
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 126/285 (44%), Gaps = 8/285 (2%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D + L++ + + + L+++M + G + Y ++ + K DE
Sbjct: 399 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEA 458
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ M G + + SY I L C ++ + + + ++++ +NP TF+T+
Sbjct: 459 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP--ITFNTLI 516
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K G VE+A E L+++ D + Y ++ G GK +E + N+ +
Sbjct: 517 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 576
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y ++ S+L+R G I + ++F+ D + N ++S K G ++A F
Sbjct: 577 PNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEF 636
Query: 410 FNSIIEEGGKPNSTSWETL-----AEGHIRERRILEALSCLKGAF 449
++ G PN +++ L +EG ++E + + C KGA
Sbjct: 637 LAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 681
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 166/425 (39%), Gaps = 52/425 (12%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
VV+ L R AL V D M RG + + L A G F S
Sbjct: 165 VVRALCARGRIADALAVLDEMPRRG----CAPIPPMYHVILEAACRGGG-----FRSAVR 215
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY---AVH---SLP----------YN 215
L+D G L+ GN L+++ + D+G A+H LP YN
Sbjct: 216 VLEDLHARGCALDV-------GNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYN 268
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ K + V+ ++ EM ++ ++N +S G E++ V M V+
Sbjct: 269 AVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM-VE 327
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
P+ ++T+ K G +E A E L R+ S + V Y+ LL S + EE
Sbjct: 328 HGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEE 387
Query: 336 VYRVW-NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
+ ++ P + ++ ++ ++ + G ++ + ++ E+ L D ++
Sbjct: 388 TEELLAEMFDKDCP-LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVI 446
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGA 454
+ + KEG D+A S+ G KPN+ S+ + +G R ++A L +G
Sbjct: 447 NGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED-LMSQMIQQGC 505
Query: 455 KSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ-------P---GYRKEKDYMSLIGL 504
P+N I F G E + LL+Q P Y D + G
Sbjct: 506 ------PLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 559
Query: 505 TDEAV 509
TDEA+
Sbjct: 560 TDEAL 564
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/264 (18%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R+Y +++ + A ++++M G + + YN ++ + ++E E ++
Sbjct: 333 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 392
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM +K LD ++NI + G +++ + E M ++ P+ T++T+ + K
Sbjct: 393 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LEHGCMPDVITYTTVINGFCK 451
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G +++A L+ + + + + Y +L S + + + + + +
Sbjct: 452 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 511
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +I+ L + G +E ++ ++ L S D + ++ K G D+A N ++
Sbjct: 512 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 571
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
+G PN+ + ++A RE RI
Sbjct: 572 NKGMSPNTIIYSSIASALSREGRI 595
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ +A A L++ M +KG + +++ Y+ + + + ++V M ++
Sbjct: 547 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ 606
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ IR D YN +SS +G TE+ M V PN +T++ + G V
Sbjct: 607 DTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM-VSSGCVPNESTYTILIRGLASEGFV 665
Query: 299 EKAEESLRRVESRITGRDRVPYHY 322
++A+E L + S+ R + H+
Sbjct: 666 KEAQEMLTELCSKGALRKHLMKHF 689
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 107/249 (42%), Gaps = 5/249 (2%)
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
++M G + Y ++ + ++ E +V EM +G+ + VY + + +
Sbjct: 209 NEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKN 268
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G + +F+ M V++ PN T + + Y G V+ A E + RD
Sbjct: 269 GMLVEAREMFDEM-VNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWT 327
Query: 320 YHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y+ + Y VG+ + RV++ V P + Y+++I L + G++ G +I +
Sbjct: 328 YNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVT--YNSLIDCLCKAGEVSGAWEIVKT 385
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
+ D +++ K D+A FN ++E G P+ S+ L G RR
Sbjct: 386 MHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRR 445
Query: 438 ILEALSCLK 446
+ EA++ L+
Sbjct: 446 MGEAMNLLR 454
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 135/349 (38%), Gaps = 46/349 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
V+ L++ + M A + D+M ++GY + + +M Y D + +
Sbjct: 257 VFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI 316
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G + DV++YN+++ G VF+ M + V PN T++++ K G+
Sbjct: 317 GEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEM-CREGVVPNIVTYNSLIDCLCKAGE 375
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLS-------------LYGSVGKKEEVYRVW---- 340
V A E ++ + D V LL L+ + + VW
Sbjct: 376 VSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTI 435
Query: 341 ---------------NLYR-----SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
NL R ++ P + Y +I L R G I ++ E +
Sbjct: 436 LIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVT--YSCLIDGLCRSGRISNAWRLLNE-MH 492
Query: 381 VKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
VK I ++++ K+ + D+A FN +I+ G +P+ + + +G+ + RI
Sbjct: 493 VKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERID 552
Query: 440 EALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLR 488
EA++ F K+ P V F A + + FV ++R
Sbjct: 553 EAIN----LFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIR 597
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LPDT+ Y LL+A + + A L ++M +G + Y +M+ Y K + D
Sbjct: 497 LPDTI----TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERID 552
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP 280
E ++ EM K + D+ +Y I ++ GS ++ + V + +NP
Sbjct: 553 EAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYE---WKFVNVIRDINP 601
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 123/265 (46%), Gaps = 3/265 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y ALL+ + ++R A ++ +M G++ S+ YN +++ Y K +E +
Sbjct: 298 DKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLK 357
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M KGI+ DV++Y LS G + VF M+ PN TF+ + M+
Sbjct: 358 TQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRA-VGCKPNICTFNALIKMHGN 416
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNL 353
G+ + + ++ D V ++ LL+++G G +V ++ + R+ F +
Sbjct: 417 RGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDT 476
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
++ +IS+ +R G + +++ L D N +++ + G ++++E +
Sbjct: 477 -FNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEM 535
Query: 414 IEEGGKPNSTSWETLAEGHIRERRI 438
+ KPN S+ +L + + I
Sbjct: 536 EDGRCKPNELSYSSLLHAYANGKEI 560
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 149/327 (45%), Gaps = 18/327 (5%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHG-VASAEDFFLSLPDTLKDRRV- 178
RY+ A+ +++ M G + I +++ V+G + +L + ++ R V
Sbjct: 208 RYRDAVNLFNKMQQDG------CNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVA 261
Query: 179 -----YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
Y L++ R + A L +M+ +G+ + YN ++ ++ K + E +
Sbjct: 262 PDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKV 321
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EM+ G +YN +S+ G E+ + M V K + P+ T++T+ + +
Sbjct: 322 LQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQM-VHKGIKPDVFTYTTLLSGFE 380
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G+ + A + + + + ++ L+ ++G+ GK E+ +V++ + +
Sbjct: 381 KAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIV 440
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
++ +++ + G + IF+E + N ++S Y + G+FD+A A + S+
Sbjct: 441 TWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSM 500
Query: 414 IEEGGKPNSTSWE----TLAEGHIRER 436
+E G P+ +++ LA G + E+
Sbjct: 501 LEAGVVPDLSTYNAVLAALARGGLWEQ 527
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 5/277 (1%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ L + D + LL + + M + +M+ G+ +N +++ Y +
Sbjct: 430 IKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGS 489
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+D+ ++ M E G+ D+ +YN L++ G E+ E V M+ D PN ++S
Sbjct: 490 FDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEME-DGRCKPNELSYS 548
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR-- 344
++ Y ++E+ + S V L+ + E R + R
Sbjct: 549 SLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRR 608
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ P +T L +AM+S R + +I + + N +M Y + NF
Sbjct: 609 GISPDITTL--NAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQ 666
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
K+E ++E+G KP+ S+ T+ + R R+ EA
Sbjct: 667 KSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEA 703
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D A+L+ Y R +M A +++ M + + YN +M +Y + + + + E ++
Sbjct: 613 DITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEIL 672
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ EKG++ D SYN + + G ++ +F MK D A+ P+ T++T Y
Sbjct: 673 REVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMK-DSALVPDVVTYNTFIATYAA 731
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+A + +R + + D+ Y+ ++ Y + ++ E S ++NL
Sbjct: 732 DSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEA-------NSFVKNLSNLD 784
Query: 355 YHAMISSLARIGDIEGMEKIFEEW 378
H +R+ +E+I + W
Sbjct: 785 PHVSKEEESRL-----LERIAKMW 803
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 12/200 (6%)
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG- 296
+ G+ +DVY+Y +++ S G +F M+ D NP T++ + +Y KMG
Sbjct: 185 QNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQD-GCNPTLITYNVVLNVYGKMGM 243
Query: 297 ---QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT-- 351
V E++R SR D Y+ L+S EE ++ + G T
Sbjct: 244 PWSNVTALVEAMR---SRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMK--LEGFTPD 298
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y+A++ + + K+ +E + S N ++S Y K G ++A
Sbjct: 299 KVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKT 358
Query: 412 SIIEEGGKPNSTSWETLAEG 431
++ +G KP+ ++ TL G
Sbjct: 359 QMVHKGIKPDVFTYTTLLSG 378
>gi|297790207|ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297308804|gb|EFH39266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 842
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 133/297 (44%), Gaps = 19/297 (6%)
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTL------KDRRVYGALLNAYVRARMRGNAELLI 199
++ +++ K +G++ + + L +++ D+ Y L+ A M A+ +
Sbjct: 504 TVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYL 563
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
+KMR+ GY +PY +++ ++K+ + + E + EM E I DV Y + +++
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G+ ++ E MK + + N ++++ +Y K+G +++AE R++ R + P
Sbjct: 624 GNVQQAMSYVEAMK-EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL-LRSCNETQYP 681
Query: 320 YHY-------LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
Y L S V K E ++ R + M+ + G E
Sbjct: 682 DVYTSHCMNNLCSERSMVRKAEAIFESMKQRRE----ANEFTFAMMLCMYKKNGRFEEAT 737
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
+I ++ ++ DP N ++ Y +G F +A F ++ G +P+ +++++L
Sbjct: 738 QIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSLG 794
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 15/249 (6%)
Query: 203 RDKG-YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
+ KG Y ++ + YN+M+ + K ++ V+S+ EM KGI+ +Y + G
Sbjct: 178 KSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGL 237
Query: 262 TEKMEGVFELMKVDK-AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD---- 316
K+ + L K+ K + P+ T + MY K + +KAEE ++ D
Sbjct: 238 --KVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVC 295
Query: 317 --RVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
Y+ ++ YG G+ +E + L + P T + ++ MI G +
Sbjct: 296 LSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVP--TTVTFNTMIHVYGNNGQFGEVT 353
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+ + + + D R N+++S + K + ++A +F + G KP+ S+ TL
Sbjct: 354 SLMKT-MKFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAF 412
Query: 433 IRERRILEA 441
R + EA
Sbjct: 413 SIRRMVKEA 421
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AE + + M+ + A + + +M+ +Y K ++E + +M+E I D SYN L
Sbjct: 702 AEAIFESMKQRREA-NEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLG 760
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
G ++ F+ M V + P+ +TF ++ T+ IK+G +KA +R++E
Sbjct: 761 LYALDGRFKEAVETFKEM-VSSGIQPDDSTFKSLGTILIKLGMSKKA---VRKIE 811
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/297 (17%), Positives = 109/297 (36%), Gaps = 40/297 (13%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F PDT R Y L++ + + A +M+ G + Y ++ + +
Sbjct: 361 FHCAPDT----RTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRR 416
Query: 226 EYDEVESMVSEMKEKGIRLDVYS----------------------------------YNI 251
E E +++EM + + +D Y+ Y+
Sbjct: 417 MVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFRRVHVAGNMSSEGYSA 476
Query: 252 WLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ + G +G + E VF + + ++ M Y EKA E + S
Sbjct: 477 NIDAYGERGYLSEAERVF--ICCQEVNKRTVLEYNVMIKAYGISKSCEKACELFESMMSY 534
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
D+ Y+ L+ + S ++ R + Y A+ISS ++G +
Sbjct: 535 GVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
E++++E + D + ++++ + GN +A ++ ++ E G NS + +L
Sbjct: 595 EEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSL 651
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 121/256 (47%), Gaps = 1/256 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+++ + A L+ KM+++G + +NV++ K E + + ++ EM
Sbjct: 240 YNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMA 299
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G+R+ Y+YN + +G + ++E M V + V+P + +T+ + K G++
Sbjct: 300 KAGLRVSPYTYNPLICGYCKKGLLVEALALWEEM-VTRGVSPTVASHNTIMYGFCKEGKM 358
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
A + L + + D + Y+ L+ + +G E + + + R + Y+ +
Sbjct: 359 SDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTL 418
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I L R+GD+E K+ E+ ++ D ++++ K GN A+ FF+ ++ G
Sbjct: 419 IDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGL 478
Query: 419 KPNSTSWETLAEGHIR 434
P+ ++ G ++
Sbjct: 479 APDQFAYTARIVGELK 494
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 121/275 (44%), Gaps = 9/275 (3%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
+PD + Y L+ + R G A +L+D++R + + + + YN ++ ++ + +
Sbjct: 374 MPDIIS----YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLE 429
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ +M +GI DV +Y + ++ G+ + F+ M + + P+ ++
Sbjct: 430 TALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEM-LHVGLAPDQFAYTAR 488
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
+K+G KA + + ++ D + Y+ ++ +G EE + L + +
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGEL--LQKMIRD 546
Query: 349 GVT--NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
G ++ Y + + + G + +IF + LS + +++ + G D A
Sbjct: 547 GHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWA 606
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A+F + E+G PN ++ L G + R++ +A
Sbjct: 607 MAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQA 641
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
+ P TT++TM + K G+V++A + + +++ R V ++ L++ + KK E+
Sbjct: 232 GIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLIN---GLSKKGEL 288
Query: 337 YRVWNLYRSVFPG---VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--N 391
+ L + + V+ Y+ +I + G + ++EE V P +A N
Sbjct: 289 QQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEM--VTRGVSPTVASHN 346
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+M + KEG A + ++++ P+ S+ TL G R I EA L
Sbjct: 347 TIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILL 400
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 5/205 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N + A+ D+M G A Y + +K+ + + +
Sbjct: 446 DVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQ 505
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM KG DV +YN++++ G+ E+ + + M D V P+ T+++ +++
Sbjct: 506 EEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHV-PDHVTYTSFMHAHME 564
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE--EVYRVWNLYRSVFPGVTN 352
G + + E + SR V Y L+ + G+ + Y + + V P V
Sbjct: 565 NGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNV-- 622
Query: 353 LGYHAMISSLARIGDIEGMEKIFEE 377
+ Y+ +I+ ++ ++ K F E
Sbjct: 623 ITYNVLINGFCKVRKMDQACKFFIE 647
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M++KG + + YNV++ + K+++ D+ EM+EKGI + Y+Y I ++ + G
Sbjct: 612 EMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMG 671
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
++ ++ M + K + P+ T + +K + ++++ +ES I DR
Sbjct: 672 KWQEALRLYAQM-LGKRIRPDSCTHGAL----LKKLDKDYKVQAVQFIESLILDGDR 723
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L++ +A L+ M +K + + +N ++ ++K ++ E E + +M
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++ I D+++YN ++ +K + +FE M V K P+ T++T+ + K +V
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM-VSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYH 356
E E R + R D V Y L+ G + +V+ S V P + + Y
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI--MTYS 474
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L G +E ++F+ + D I M+ K G D F S+ +
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLK 446
G KPN ++ T+ G +R + EA + LK
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 124/270 (45%), Gaps = 13/270 (4%)
Query: 179 YGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
YG ++N + RG+ +L L++KM + +N ++ K + D+ ++
Sbjct: 228 YGVVVNGLCK---RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 284
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM+ KGIR +V +Y+ +S S G + M ++K +NPN TF+ + ++K
Sbjct: 285 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKE 343
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLS---LYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G+ +AE+ + R D Y+ L++ ++ + K ++++ + + + FP V
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FMVSKDCFPDVVT 402
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I + +E ++F E D ++ +G+ D A+ F
Sbjct: 403 --YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ +G P+ ++ L +G ++ +AL
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 124/262 (47%), Gaps = 9/262 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+LLN Y + +A L+D+M + GY ++ + ++ + E ++V M ++
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G + ++ +Y + ++ +G T+ + M+ K + + F+T+ K V+
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDD 278
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAM 358
A + +E++ + V Y L+S S G+ + ++ + + + + P + ++A+
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT--FNAL 336
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEE 416
I + + G EK++++ +K S DP I N +++ + DKA+ F ++ +
Sbjct: 337 IDAFVKEGKFVEAEKLYDDM--IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 417 GGKPNSTSWETLAEGHIRERRI 438
P+ ++ TL +G + +R+
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRV 416
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 136/344 (39%), Gaps = 17/344 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+N + R A L+ KM GY + + ++ Y K + ++V +M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E G R D ++ + + + + M V + PN T+ + K G
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNL 353
+ A L ++E+ D V ++ ++ S+ K V NL+ + + P V
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIID---SLCKYRHVDDALNLFKEMETKGIRPNVVT- 297
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y ++IS L G ++ + + K + + N ++ +VKEG F +AE ++ +
Sbjct: 298 -YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA-CE 472
I+ P+ ++ +L G R+ +A K F +K P V K C+
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKA----KQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 473 EESDMGSKEAFVALLRQPGYRKEKDYMSLI-GLTDEAVAENNKK 515
+ E F + + Y +LI GL + +N +K
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 98/241 (40%), Gaps = 2/241 (0%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F+ D D Y L+ + +++ + L +M +G ++ Y ++
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ D + + +M G+ D+ +Y+I L + G EK VF+ M+ + + +
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KSEIKLDIYIY 508
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+TM K G+V+ + + + + V Y+ ++S S +E Y + +
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
P + Y+ +I + R GD ++ E S + D L+ + + +G DK
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM-LHDGRLDK 627
Query: 406 A 406
+
Sbjct: 628 S 628
>gi|449447783|ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Cucumis sativus]
Length = 1020
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 126/282 (44%), Gaps = 10/282 (3%)
Query: 162 AEDFFL---SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
AE FL L D Y ++ AY +A + A LL M+++G YN ++
Sbjct: 514 AESIFLWKRDLSGKKMDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTYNSLI 573
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
++ DE +++EM+ G + +++ ++S G V+++M V V
Sbjct: 574 QMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMM-VHADV 632
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
PN + + + ++GQ E+A + R +E +++ L+ + VG E+ R
Sbjct: 633 EPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLEDARR 692
Query: 339 VWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
++N +++ G + ++MI+ A +G + +++FE+ L + D M+ Y
Sbjct: 693 IYNRMKNMEDGADTIASNSMINLYADLGMVSEAKQVFED-LRERGYADGVSFATMIYLYK 751
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE-----GHIRE 435
G D+A + E G ++TS+ + E G +RE
Sbjct: 752 NIGMLDEAIEVAEEMKESGLLRDATSFRKVIECYAINGQVRE 793
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 106/269 (39%), Gaps = 35/269 (13%)
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
K Y + + YN+++ + +++DE+ +EM E G+ +Y + + G G ++
Sbjct: 155 KDYVPNVIHYNIVLRTLGQAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKE 214
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR------------VESRI 312
+ M V + + P+ T +T+ + G+ + A++ + + SR+
Sbjct: 215 ALLWIKHMTV-RGIFPDEVTMNTVVRVLKDAGEFDSADKFYKDWCRGLVELNDFDLNSRV 273
Query: 313 TG-------RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL--------GYHA 357
P H+LL+ +G R+ N R V P V N Y+
Sbjct: 274 EDFGVNSAVEPITPKHFLLTELFRIGT-----RIPN--RKVSPEVDNCVRKPRLTSTYNT 326
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I + G ++ +F E L+ S D N M+ G+ +AE + E G
Sbjct: 327 LIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLAEAETLLLKMEERG 386
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLK 446
P++ ++ + I AL C +
Sbjct: 387 LSPDTKTYNIFLSLYANNGNIDGALKCYR 415
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 39/255 (15%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +++N Y M A+ + + +R++GYA + + M+ LY I DE +
Sbjct: 705 DTIASNSMINLYADLGMVSEAKQVFEDLRERGYA-DGVSFATMIYLYKNIGMLDEAIEVA 763
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EMKE G+ D S+ + G + + M V + + P+ TF+ + T+ +K
Sbjct: 764 EEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEM-VTRKLLPDNRTFNVLFTI-LK 821
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G + E++ ++ES +H +E+ Y + +VF G LG
Sbjct: 822 KGVIPL--EAVSQLES--------AFH-----------EEKTYARQAIIAAVFSG---LG 857
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
HA S+L + +L + D N+ + Y DKA F +
Sbjct: 858 LHA--SALESC----------DTFLKAEVQLDSFAYNVAIYAYGAAEKIDKALNIFMKMK 905
Query: 415 EEGGKPNSTSWETLA 429
++ KP+ ++ L
Sbjct: 906 DQNLKPDLVTYINLV 920
>gi|413934890|gb|AFW69441.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
Length = 504
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 127/280 (45%), Gaps = 15/280 (5%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
++RR Y LL AY RA ++ ++ +MR G + + Y++++ LY + + +
Sbjct: 156 RNRRTYTLLLGAYARAGRLEDSWWVLGEMRRWGIRLDTAGYSMLVRLYRDNGMWKKATDL 215
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
V EM+E G+ LDV Y+ + + G G +F+ M+ + V P+ +T++ + +
Sbjct: 216 VMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMRAE-GVRPDISTWNALIQWHC 274
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
++G +++A ++ D + ++S G GK W+ + +F G+ N
Sbjct: 275 RVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGK-------WDEIKKLFDGMNNR 327
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD-------PRIANLMMSWYVKEGNFDKA 406
G+ + A + DI G F + ++ PR+ ++ + Y ++G ++
Sbjct: 328 GFKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENTQLLPRVFCVIANAYAQQGLCEQT 387
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ EEG +PN +L R LEAL+ +
Sbjct: 388 VNVLQLMEEEGFEPNLVMLNSLINAFGTAGRHLEALAVFQ 427
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 97/242 (40%), Gaps = 45/242 (18%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M D G A + Y +++ Y + ++ ++ EM+ GIRLD Y
Sbjct: 148 QMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRWGIRLDTAGY----------- 196
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
S + +Y G +KA + + ++ D Y
Sbjct: 197 -------------------------SMLVRLYRDNGMWKKATDLVMEMQEVGVELDVKIY 231
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
L+ +G G+ + R+++ R+ V P ++ ++A+I R+G+++ + F
Sbjct: 232 SGLIDTFGKYGQLADARRMFDKMRAEGVRPDIST--WNALIQWHCRVGNMKRALRFFTSM 289
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE-----GHI 433
DP+I +++S ++G +D+ + F+ + G K + + L + GH
Sbjct: 290 QEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHF 349
Query: 434 RE 435
R+
Sbjct: 350 RD 351
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-- 169
++ L + ++ +++D MNNRG F+ S + AI +D+ + A+D +L
Sbjct: 304 IISRLGEQGKWDEIKKLFDGMNNRG--FKESGAVYAILVDIYGQYGHFRDAQDCIAALRA 361
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+T RV+ + NAY + + ++ M ++G+ + + N ++ + + E
Sbjct: 362 ENTQLLPRVFCVIANAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLNSLINAFGTAGRHLE 421
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
++ +K+ G+ DV +Y + + EK+ V+ M+
Sbjct: 422 ALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVSEVYREME 465
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 168/419 (40%), Gaps = 29/419 (6%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRGERF-RLSASDAAIQLDLIAKV-HGVASAEDFFLS 168
R +K LR +Y H L+ W+ G L A Q + + K+ H A FF
Sbjct: 296 RSLKSLRSVEQYYHTLQQMKWVPMTGHVLDNLHCKIDAFQANQVLKLLHDHTIALGFFQW 355
Query: 169 L---PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP----YNVMMTLY 221
L P D Y ++ +AR G L+D+M +VH P YN ++ Y
Sbjct: 356 LKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMN----SVHCKPTVVTYNRIIHAY 411
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
+ E + EM++ G D +Y + G E ++ M+ + ++P+
Sbjct: 412 GRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQ-EVGLSPD 470
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
T+S M K G + A + + + V Y+ +++L E V +++
Sbjct: 471 TFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYK 530
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ + Y ++ L G ++ E +F E + +P + L++ + K G
Sbjct: 531 DMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPDEP-VYGLLVDLWGKAG 589
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKP 461
N DKA ++++++++G +PN + +L ++ R +A S L+ A+ P
Sbjct: 590 NVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNML----AQGLVPSL 645
Query: 462 VNVINFFKACEE-ESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKNDED 519
C E ++ MG +A+ P +M L+ L D AE +N D
Sbjct: 646 QTYTLLLSCCTEAQAQMGLCCQLMAITGHPA------HMFLLYLPD---AEPGGQNVRD 695
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 136/282 (48%), Gaps = 9/282 (3%)
Query: 166 FLSLPDTLKDR-RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
+L+ +T K + R+Y ++NAYV+++ ++ ++M DKG+ S +N ++T +
Sbjct: 83 YLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGS 142
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK-MEGVFELMKVDKAVNPNWT 283
+++ +E K K + LDVYS+ I + C G EK + + EL + +PN
Sbjct: 143 SSFNQWWCFFNESKIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREF--GFSPNVV 199
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
++T+ K G++EKA++ + + Y L+ G K++ + ++
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM 259
Query: 344 R--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ VFP + Y+ +++ L + G + K+F+E S + N ++ +E
Sbjct: 260 QEHGVFPNLHT--YNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREM 317
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
++A + + +G PN ++ TL +G R++ +ALS
Sbjct: 318 KANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALS 359
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 130/297 (43%), Gaps = 7/297 (2%)
Query: 150 LDLIAKVHGVASAEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+D K + A+D F + + + Y L++ + ++ + +KM++ G
Sbjct: 205 IDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGV 264
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ YN +M K + + EM+E+G+ ++ +YN + + +
Sbjct: 265 FPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANE 324
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
V + MK D +NPN T++T+ + + ++ KA R ++SR V Y+ L+S +
Sbjct: 325 VMDQMKSD-GINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 328 GSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G +V R + P + + Y +I + AR ++E ++ + +
Sbjct: 384 CKKGDTSGAGKVVKEMEERGIKP--SKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTP 441
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
D ++++ + +G ++A F S++E+ +PN + T+ G+ +E AL
Sbjct: 442 DVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRAL 498
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 119/268 (44%), Gaps = 7/268 (2%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y ++N + +A + D+MR++G + + + YN ++ + + +E ++ +
Sbjct: 269 HTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQ 328
Query: 237 MKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
MK GI ++ +YN + CG + + + +L + ++P+ T++ + + + K
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLK--SRGLSPSLVTYNILVSGFCKK 386
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNL 353
G A + ++ +E R +V Y L+ + E+ ++ + + P V
Sbjct: 387 GDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHT- 445
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +I G + ++F+ + K + I N M+ Y KEG+ +A F +
Sbjct: 446 -YSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREM 504
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
E+ PN S+ + E +ER+ EA
Sbjct: 505 EEKELPPNVASYRYMIEVLCKERKSKEA 532
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 101/234 (43%), Gaps = 6/234 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V+ +L K R K A +V+D M RG + + I L ++ + E D
Sbjct: 274 VMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG-GLCREMKANEANEVMDQMKSD 332
Query: 172 TLKDRRV-YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ + Y L++ + R G A L ++ +G + + YN++++ + K +
Sbjct: 333 GINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+V EM+E+GI+ +Y I + + + EK + M+ + + P+ T+S +
Sbjct: 393 GKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSME-ELGLTPDVHTYSVLIH 451
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
+ G++ +A + + + + V Y+ ++ Y G YR L+R
Sbjct: 452 GFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSS---YRALRLFR 502
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L++ +A L+ M +K + + +N ++ ++K ++ E E + +M
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++ I D+++YN ++ +K + +FE M V K P+ T++T+ + K +V
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM-VSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYH 356
E E R + R D V Y L+ G + +V+ S V P + + Y
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI--MTYS 399
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L G +E ++F+ + D I M+ K G D F S+ +
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLK 446
G KPN ++ T+ G +R + EA + LK
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 124/270 (45%), Gaps = 13/270 (4%)
Query: 179 YGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
YG ++N + RG+ +L L++KM + +N ++ K + D+ ++
Sbjct: 153 YGVVVNGLCK---RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM+ KGIR +V +Y+ +S S G + M ++K +NPN TF+ + ++K
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKE 268
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLS---LYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G+ +AE+ + R D Y+ L++ ++ + K ++++ + + + FP +
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE-FMVSKDCFPDLDT 327
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I + +E ++F E D ++ +G+ D A+ F
Sbjct: 328 --YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ +G P+ ++ L +G ++ +AL
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 122/262 (46%), Gaps = 9/262 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+LLN Y + +A L+D+M + GY ++ + ++ + E ++V M ++
Sbjct: 85 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 144
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G + ++ +Y + ++ +G + + M+ K + + F+T+ K V+
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDD 203
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAM 358
A + +E++ + V Y L+S S G+ + ++ + + + + P + ++A+
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT--FNAL 261
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEE 416
I + + G EK+ ++ +K S DP I N +++ + DKA+ F ++ +
Sbjct: 262 IDAFVKEGKFVEAEKLHDDM--IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 417 GGKPNSTSWETLAEGHIRERRI 438
P+ ++ TL +G + +R+
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRV 341
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 111/268 (41%), Gaps = 11/268 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+N + R A L+ KM GY + + ++ Y K + ++V +M
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 107
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E G R D ++ + + + + M V + PN T+ + K G +
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNL 353
+ A L ++E+ D V ++ ++ S+ K V NL+ + + P V
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIID---SLCKYRHVDDALNLFKEMETKGIRPNVVT- 222
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y ++IS L G ++ + + K + + N ++ +VKEG F +AE + +
Sbjct: 223 -YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
I+ P+ ++ +L G R+ +A
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 98/241 (40%), Gaps = 2/241 (0%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F+ D D Y L+ + +++ + L +M +G ++ Y ++
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ D + + +M G+ D+ +Y+I L + G EK VF+ M+ + + +
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KSEIKLDIYIY 433
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+TM K G+V+ + + + + V Y+ ++S S +E Y + +
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
P + Y+ +I + R GD ++ E S + D L+ + + +G DK
Sbjct: 494 DGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM-LHDGRLDK 552
Query: 406 A 406
+
Sbjct: 553 S 553
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELM 272
+N +++ K+K++D V S+ +M+ GI ++Y+YNI ++ C + + + ++M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL-SLYGSVG 331
K+ P+ T S++ Y ++ A + ++ D + + L+ L+
Sbjct: 73 KL--GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 332 KKEEVYRVWNLY-RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
E V V + R P + Y +++ L + GDI+ + + + K D I
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVT--YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
N ++ K + D A F + +G +PN ++ +L
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGA+++ VR +A +I++MR KG + ++ ++T + K+ E D + M
Sbjct: 421 YGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMV 480
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
GI+ +V Y+ + G + E +F M K V PN T+S+M Y ++G
Sbjct: 481 AAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCV-PNIMTYSSMVRGYFQIGDS 539
Query: 299 EKAE---ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
+A E + R+ + V Y L++ +VG+ ++ VW L R P +
Sbjct: 540 SQALSFWEDMLRIGCT---PNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVP--DTI 594
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFNS 412
Y +MI G ++ ++F + L+ ++ I N+++ ++ + +A N
Sbjct: 595 AYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQ 654
Query: 413 IIEEGGKPNSTSWETL 428
++++ P++ + T
Sbjct: 655 MLDQACDPDTVTCNTF 670
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 114/259 (44%), Gaps = 2/259 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D+ Y +++A A +A L+ +M G V + +N ++ ++ +
Sbjct: 311 VPDKFTYSTVVSALADAGRVDDAVALVHEMVVDG-VVAAEAFNPVLGAMLRTGDVTGAAK 369
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ S M+ KG +YN+ L G + GV M+ + V P T+ +
Sbjct: 370 LFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVV-PGVMTYGAVVDGL 428
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
++ G++E A + + + S+ + + +++ + +G+ + RVW+ +
Sbjct: 429 VRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNV 488
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y AMI LAR G + E +F E + K + + M+ Y + G+ +A +F+
Sbjct: 489 VLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWED 548
Query: 413 IIEEGGKPNSTSWETLAEG 431
++ G PN+ ++ L G
Sbjct: 549 MLRIGCTPNAVTYSVLING 567
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 174/409 (42%), Gaps = 23/409 (5%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
+VLN W GR + +++E+ KHA+ V+ WM N+ E + + +
Sbjct: 106 AVLNCW--AGR-FARRNFPLLIREIAISGSLKHAVHVFRWMKNQ-ENYCARNDIYGMMIR 161
Query: 152 LIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
L A+ + V A F + + + Y +L++A+ RA A ++D M+
Sbjct: 162 LHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPP 221
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
YN ++ + + + +M E G+ D+ ++NI LS+ + K F
Sbjct: 222 SRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYF 281
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG--RDRVPYHYLLSLY 327
E+MK K V P+ T + + +K+G +A E + R T D V Y ++ Y
Sbjct: 282 EIMKSSK-VAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSY 340
Query: 328 GSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIG-DIEGMEKIFEEWLSVKSS 384
G+ E V+++ V P + + Y+A++ + A G E +E F+ L ++
Sbjct: 341 SVCGQAENCKAVFDIMVAEGVRPNI--VSYNALLGAYASHGMHTEALET-FK--LLKQNG 395
Query: 385 YDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
P I + +++ Y + +KA FN + + KPN S+ L + + + EA+
Sbjct: 396 LRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAI 455
Query: 443 SCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPG 491
S L +G + P +++ AC + + +A + G
Sbjct: 456 SLLH-EMEQDGIQ---PDVISISTLLTACGRCKQLTKIDIILAAAKSRG 500
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 130/306 (42%), Gaps = 38/306 (12%)
Query: 128 VYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK-DRRVYGALLNAY 186
V+D M G R + + +A + +H A E F L + L+ D Y +LLNAY
Sbjct: 352 VFDIMVAEGVRPNIVSYNALLGAYASHGMHTEA-LETFKLLKQNGLRPDIVSYTSLLNAY 410
Query: 187 VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDV 246
R+ A + ++MR + + YN ++ Y E S++ EM++ GI+ DV
Sbjct: 411 GRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDV 470
Query: 247 YSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLR 306
S + L++CG K++ + K + + N +++ Y+ +G +KA
Sbjct: 471 ISISTLLTACGRCKQLTKIDIILAAAK-SRGIQLNTVAYNSGIGSYLSLGDYKKA----- 524
Query: 307 RVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIG 366
L LY S+ R N V P Y+ +IS ++G
Sbjct: 525 -----------------LVLYTSM-------RAGN----VKPDAVT--YNILISGSCKLG 554
Query: 367 DIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWE 426
K FE+ L + + + ++ YVK+G +A + FNS+ E G P+ ++
Sbjct: 555 RYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYT 614
Query: 427 TLAEGH 432
TL + +
Sbjct: 615 TLIKAY 620
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 121/300 (40%), Gaps = 22/300 (7%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG---YAVHSL---------- 212
L+LP D A+LN + R N LLI ++ G +AVH
Sbjct: 93 LLALPHA--DADAVDAVLNCWAGRFARRNFPLLIREIAISGSLKHAVHVFRWMKNQENYC 150
Query: 213 ----PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
Y +M+ L+ + + D+ + EM+E + + +YN + + G +
Sbjct: 151 ARNDIYGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINI 210
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
+ M+ A+ P+ TT++ + G +KA E +++ G D + ++ +LS +
Sbjct: 211 MDDMQ-RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFK 269
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
+ + + + + +S + +I L +IG ++F +++ P
Sbjct: 270 NGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPD 329
Query: 389 IANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ +M Y G + +A F+ ++ EG +PN S+ L + EAL K
Sbjct: 330 VVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFK 389
>gi|356522073|ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 685
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 12/223 (5%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK------DRRV 178
AL +YD R E++RL + + K++G+A D L++ +K + +
Sbjct: 251 ALRLYD--RARTEKWRLDT----VTFSTLIKMYGLAGNYDGCLNVYQEMKVLGVKPNMVI 304
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+A RA+ A+ + +M + G++ + + Y ++ Y + + ++ + EMK
Sbjct: 305 YNTLLDAMGRAKRPWQAKSIYTEMTNNGFSPNWVTYASLLRAYGRGRYSEDALFVYKEMK 364
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG+ ++ + YN L+ C G + +FE MK + TFS++ T+Y G V
Sbjct: 365 EKGMEMNTHLYNTLLAMCADLGLANEAFEIFEDMKTSATCLCDSWTFSSLITIYSCTGNV 424
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
+AE L + + L+ YG VG+ ++V + +N
Sbjct: 425 SEAERMLNEMIESGSQPTIFVLTSLVQCYGKVGRTDDVVKTFN 467
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 113/248 (45%), Gaps = 2/248 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A+++AY RA A L D+ R + + + ++ ++ ++ +Y YD ++
Sbjct: 231 DDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDTVTFSTLIKMYGLAGNYDGCLNVY 290
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EMK G++ ++ YN L + G + + ++ M + +PNW T++++ Y +
Sbjct: 291 QEMKVLGVKPNMVIYNTLLDAMGRAKRPWQAKSIYTEM-TNNGFSPNWVTYASLLRAYGR 349
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFPGVTNL 353
E A + ++ + + Y+ LL++ +G E + ++ ++ S +
Sbjct: 350 GRYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCADLGLANEAFEIFEDMKTSATCLCDSW 409
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+ ++I+ + G++ E++ E + S + ++ Y K G D FN +
Sbjct: 410 TFSSLITIYSCTGNVSEAERMLNEMIESGSQPTIFVLTSLVQCYGKVGRTDDVVKTFNQL 469
Query: 414 IEEGGKPN 421
++ G P+
Sbjct: 470 LDLGISPD 477
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 37/257 (14%)
Query: 129 YDWMNNRGERFRL--SASDAAIQLDLIAKVHGVASA----EDFFLSLPD----------- 171
Y W+N R R + S S A L+ H + S ED L L D
Sbjct: 74 YIWVNPRSPRAKQLESRSYDARYTSLVNLAHSLDSCNPSQEDVSLVLKDLGDRVIEQDAV 133
Query: 172 ----TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
+ + RV +LN Y + R+R E+++ YNV + ++ K K+
Sbjct: 134 IVINNMSNSRVVPFVLN-YFQRRIRPTREVIL--------------YNVTLKVFRKSKDL 178
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
D +E + EM ++G+R D +++ +S K FE M P+ T+S
Sbjct: 179 DAMEKLFDEMLQRGVRPDNVTFSTIISCARICSLPNKAVEWFEKMS-SFGCEPDDVTYSA 237
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
M Y + G ++ A R + D V + L+ +YG G + V+ + +
Sbjct: 238 MIDAYGRAGNIDMALRLYDRARTEKWRLDTVTFSTLIKMYGLAGNYDGCLNVYQEMKVLG 297
Query: 348 PGVTNLGYHAMISSLAR 364
+ Y+ ++ ++ R
Sbjct: 298 VKPNMVIYNTLLDAMGR 314
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 84/198 (42%), Gaps = 1/198 (0%)
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
+V YN+ L + ME +F+ M + + V P+ TFST+ + KA E
Sbjct: 161 EVILYNVTLKVFRKSKDLDAMEKLFDEM-LQRGVRPDNVTFSTIISCARICSLPNKAVEW 219
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
++ S D V Y ++ YG G + R+++ R+ + + + +I
Sbjct: 220 FEKMSSFGCEPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDTVTFSTLIKMYGL 279
Query: 365 IGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTS 424
G+ +G +++E + + I N ++ + +A++ + + G PN +
Sbjct: 280 AGNYDGCLNVYQEMKVLGVKPNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFSPNWVT 339
Query: 425 WETLAEGHIRERRILEAL 442
+ +L + R R +AL
Sbjct: 340 YASLLRAYGRGRYSEDAL 357
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 159/393 (40%), Gaps = 40/393 (10%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
A LN+ G + + ++ +L KF + A +Y M N G + L + I
Sbjct: 148 ADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI-- 205
Query: 151 DLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
++++K V AE + D D Y +L+ + R R A + D+M +G
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 265
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+S+ Y+ ++ DE M+ EM EKGI VY+Y + +++ + E+ +
Sbjct: 266 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 325
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
MK + PN T++ + + ++G++E A ++ + V Y+ L++
Sbjct: 326 VARMK-KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
G+ ++++ Y+ +I L GDIE +FE+ L +
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444
Query: 389 IANLMMSWYVKEGN-----------------------------------FDKAEAFFNSI 413
N +++ Y+ +GN + A +F +
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+E G PN S+ L +GH ++ ++ ALS LK
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 140/362 (38%), Gaps = 40/362 (11%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ EL R+ AL+++ WM G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHG----------------------------------- 403
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+L + + Y ++ A +L +KM G + YN ++ Y+ +
Sbjct: 404 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 463
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ MKE G D ++YN +S G E F+ M V+ +NPN +++ +
Sbjct: 464 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM-VECGLNPNPVSYTALIDG 522
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
+ K G+V+ A L+R+E + Y+ +++ + E ++ + + + + P
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN 582
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
V + Y +I L R G + KIF + K + + ++ +EG D+AE
Sbjct: 583 V--ITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEIL 640
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFK 469
+ +G P+ ++ +L +G + RI A L+ ++R V + K
Sbjct: 641 LKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700
Query: 470 AC 471
C
Sbjct: 701 EC 702
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL----SLYGSVGKKEEVYRV 339
F+ + I M + + EE +RRV + + + + L +L + K E V
Sbjct: 123 VFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGA 182
Query: 340 WNLYRSVF-PGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
NLY+ + G+ + L ++ +I+ L++ G + E I + S D ++
Sbjct: 183 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 242
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ + N D A F+ +++EG PNS ++ TL G E R+ EAL L+
Sbjct: 243 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLE 292
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 11/254 (4%)
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
K K D V+ + EM + G DV +Y+ ++ GST + + M+ +K PN
Sbjct: 60 KAKIIDAVK-LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKME-EKGCKPNV 117
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN- 341
+ST+ K + +A E L + +R + V Y +L + ++G+ E ++
Sbjct: 118 VVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQ 177
Query: 342 -LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
+ R+V P ++ ++ L++ G I + +FE + + N +M Y +
Sbjct: 178 MVERNVMPDTVT--FNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQ 235
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPK 460
D+A+ FN ++ +G P+ S+ L +GH + RI EA KG A K+ P
Sbjct: 236 SQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEA----KGLLAEMSHKALTPD 291
Query: 461 PVNVINFFKA-CEE 473
V K C++
Sbjct: 292 TVTYSTLMKGFCQD 305
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 151/375 (40%), Gaps = 22/375 (5%)
Query: 70 MIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVY 129
+I ++ I L M + + + +L E+ G ++ L K + A+E
Sbjct: 82 VITYSTIINGLCKMGSTTM-AIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFL 140
Query: 130 DWMNNRGERFRLSASDAAIQLDLIAKVHGVAS------AEDFFLSLP--DTLKDRRVYGA 181
M NRG S + I +HG + A F + + + D +
Sbjct: 141 SEMVNRG------ISPNVVTYSSI--LHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNI 192
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L++ + M A+ + + M +KG + YN +M Y + DE + + + M KG
Sbjct: 193 LVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG 252
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
V SYNI + G ++ +G+ M KA+ P+ T+ST+ + + G+ + A
Sbjct: 253 CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMS-HKALTPDTVTYSTLMKGFCQDGRPQDA 311
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMI 359
++ L + S D + Y +L G +E + + + + P + Y +I
Sbjct: 312 QKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNI--FIYTILI 369
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ G +E ++F D +M+S +K G ++A F + G
Sbjct: 370 QGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCL 429
Query: 420 PNSTSWETLAEGHIR 434
PNS ++ + +G +R
Sbjct: 430 PNSCTYNVIIQGFLR 444
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 115/264 (43%), Gaps = 5/264 (1%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y AL++ Y A+ L + M KG A YN+++ + K DE + +++E
Sbjct: 223 NTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M K + D +Y+ + G + + + E M+ + P+ T+S + K G
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR-SYGLLPDLMTYSIVLDGLCKQG 341
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLY-RSVFPGVTNLG 354
+++A E L+ ++ + Y L+ + GK E ++ NL+ + + P V
Sbjct: 342 HLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVT-- 399
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y MIS L + G ++F + + N+++ +++ G+ A ++
Sbjct: 400 YTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMV 459
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
G +S++++ L++ R+ I
Sbjct: 460 GRGFSADSSTFQMLSDLESRDEII 483
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 119/274 (43%), Gaps = 5/274 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N + A L+ KM +KG + + Y+ ++ K K E +
Sbjct: 81 DVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFL 140
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM +GI +V +Y+ L + G + + +F+ M V++ V P+ TF+ + K
Sbjct: 141 SEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQM-VERNVMPDTVTFNILVDGLSK 199
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
G + +A+ + + + Y+ L+ Y S + +E +++N+ + P V +
Sbjct: 200 EGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRS 259
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I + G I+ + + E + D + +M + ++G A+
Sbjct: 260 --YNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEE 317
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ G P+ ++ + +G ++ + EA LK
Sbjct: 318 MRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLK 351
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 120/266 (45%), Gaps = 6/266 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y AL+ A+ RA+ A L+++MR++G + + YNV++ K+ + +V +M
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 241
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E G +V ++N + +G+ + + +M V K + PN T+S + K +
Sbjct: 242 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIM-VAKGMRPNVVTYSALIDGLCKSQKF 300
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN--LGYH 356
+A+E L +++R D Y L+ K EE ++ L R G T + Y
Sbjct: 301 LEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQM--LRRMAGSGCTPDVVVYS 358
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++I + + G + +K +E + S D N ++ K G +A+ + E
Sbjct: 359 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQES 418
Query: 417 GGK-PNSTSWETLAEGHIRERRILEA 441
G P+ ++ T+ G + ++EA
Sbjct: 419 GDVLPDVVTYSTVINGLCKSDMLVEA 444
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 127/302 (42%), Gaps = 19/302 (6%)
Query: 142 SASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDK 201
+A D L+L+ ++ A D F P + A+ NA G+ + +D
Sbjct: 124 NAGDLHAALELLEEMKSAGFAPDAFTHTP-------IITAMANA-------GDLDGAMDH 169
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
+R G + + Y ++ + + K+ +E ++ EM+E+G ++ +YN+ + +
Sbjct: 170 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 229
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
+ V + M ++ PN TF+++ + K G V+ A + L + ++ + V Y
Sbjct: 230 VGAAQDVVKKM-IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYS 288
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
L+ K E V R V P Y A+I L + IE E++
Sbjct: 289 ALIDGLCKSQKFLEAKEVLEEMKTRGVTPDA--FTYSALIHGLCKADKIEEAEQMLRRMA 346
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+ D + + ++ + K G +A+ + ++ P+ ++ T+ +G + +I
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406
Query: 440 EA 441
EA
Sbjct: 407 EA 408
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 103/238 (43%), Gaps = 8/238 (3%)
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G++ + +N ++ + ++ K++ E + DV SYNI +S + G
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
+ E MK P+ T + + T G ++ A + LR S + V Y L++
Sbjct: 132 LELLEEMK-SAGFAPDAFTHTPIITAMANAGDLDGAMDHLR---SMGCDPNVVTYTALIA 187
Query: 326 LYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
+ K EE ++ R + Y+ ++ +L ++ + + + ++ ++ +
Sbjct: 188 AFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM--IEGGF 245
Query: 386 DPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
P + N ++ + K GN D A ++ +G +PN ++ L +G + ++ LEA
Sbjct: 246 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEA 303
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 114/271 (42%), Gaps = 6/271 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL++ +A AE ++ +M G + Y+ ++ + K + E + +
Sbjct: 318 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL 377
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+++ DV +YN + G + + + E M+ V P+ T+ST+ K
Sbjct: 378 QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCK 437
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV-YRVWNLYRS-VFPGVTN 352
+ +A++ L R+ D V Y ++ G+ EE Y + + R+ P V
Sbjct: 438 SDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVT 497
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y +IS L + ++ E++ EE + + N M++ G +A+
Sbjct: 498 --YTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQR 555
Query: 413 IIEEGGK--PNSTSWETLAEGHIRERRILEA 441
+ + + P++ ++ T+ + + EA
Sbjct: 556 MKDGRAECSPDAATYRTIVNALMSSDLVQEA 586
>gi|255661196|gb|ACU25767.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 426
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D VY +++N + +A++ A LI +MR G ++ Y ++T+Y++ K++ E S+
Sbjct: 78 DLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTMYVENKKFIEALSVF 137
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM+E LD+ + NI + G G ++ + +F M+ V PN +++T+ +Y
Sbjct: 138 AEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMR-KLGVEPNVVSYNTLLRVYSD 196
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+A R ++ + ++ V Y+ ++ +YG + E+ + +S +
Sbjct: 197 AELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAIT 256
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +IS ++G ++ +FE+ S D + M+ Y + G A+ + +
Sbjct: 257 YSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELK 316
Query: 415 EEGGKPNSTSWETLA 429
P T+ + LA
Sbjct: 317 TPDNIPRDTAIQILA 331
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 136/302 (45%), Gaps = 13/302 (4%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV- 178
+++ AL V+ M R + L + I +D+ ++ A+ F S+ + V
Sbjct: 128 KKFIEALSVFAEM--REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVV 185
Query: 179 -YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL Y A + G A L M+ K + + YN MM +Y K E+++ +++ EM
Sbjct: 186 SYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +GI + +Y+ +S G G ++ +FE ++ + + + TM Y + G
Sbjct: 246 QSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLR-SSGIEIDQVLYQTMIVAYERAGL 304
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-VTNLG-Y 355
V A+ L +++ D +P + + G+ EE W +++ G V ++ +
Sbjct: 305 VSHAKRLLHELKTP----DNIPRDTAIQILAGSGRMEEA--TWVFRQAIDAGEVKDITVF 358
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
MI ++ + ++F++ + D + L+++ Y K +F+KA + + +
Sbjct: 359 EQMIDLFSKYRKYSNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHDFEKANDVYLEMQD 418
Query: 416 EG 417
EG
Sbjct: 419 EG 420
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 5/250 (2%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D +++ Y + M A+ L MR G + + YN ++ +Y + + E
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNTLLRVYSDAELFGEAXH 205
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ M+ K I +V +YN + G EK + + M+ + + PN T+ST+ +++
Sbjct: 206 LFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ-SRGIEPNAITYSTIISIW 264
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K+G++++A ++ S D+V Y ++ Y G R+ + ++ P N
Sbjct: 265 GKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELKT--PD--N 320
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ I LA G +E +F + + D + M+ + K + F+
Sbjct: 321 IPRDTAIQILAGSGRMEEATWVFRQAIDAGEVKDITVFEQMIDLFSKYRKYSNVVEVFDK 380
Query: 413 IIEEGGKPNS 422
+ G P+S
Sbjct: 381 MRGLGYFPDS 390
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 150/361 (41%), Gaps = 13/361 (3%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
+ SV + EK G + C +V R + AL VY M +RG + +
Sbjct: 314 AESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILH 373
Query: 150 -LDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
LD + + V D F ++ DR+ Y L +A + +A ++D+++
Sbjct: 374 CLDEMGRALEVV---DMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQ 430
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
V Y ++ Y + E +S+ EM+E+G + DV +YN+ + + +
Sbjct: 431 LDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAM 490
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
+ M+ + V PN TT + G+VE+AEE ++ Y L++
Sbjct: 491 DLLNYME-SQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNG 549
Query: 327 Y---GSVGKKEEVYRVWNLYRSVFP---GVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
Y + K E+ + L R++ + + Y + ++L G++EG +F ++
Sbjct: 550 YCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIH 609
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ D +M++ Y K +A F + E G P++ ++ + G+ + + E
Sbjct: 610 TGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLRE 669
Query: 441 A 441
A
Sbjct: 670 A 670
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 122/311 (39%), Gaps = 38/311 (12%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LP+ L + L+N V+ A L + + G + Y +++ K +++
Sbjct: 187 LPNILS----FNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWE 242
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGS----------------------TEKM 265
V + EMKE G+ D Y Y ++ C + S T +
Sbjct: 243 NVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVI 302
Query: 266 EGVFELMKVDKA-----------VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
G K+D+A + P+ + + Y +KA + + SR
Sbjct: 303 RGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIK 362
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKI 374
+ V + +L +G+ EV ++ ++ + Y+ + +L ++G ++ +
Sbjct: 363 TNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGM 422
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+E S++ D + +++ Y +G +A++ F + E G KP+ ++ LA G R
Sbjct: 423 LDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFR 482
Query: 435 ERRILEALSCL 445
R EA+ L
Sbjct: 483 NRTDFEAMDLL 493
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N Y + A L M+++G ++ Y +M+ Y K+ E +
Sbjct: 615 DAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELF 674
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
+MKE+GI+ DV +Y + + + G TE ++ M +D + P T
Sbjct: 675 KDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEM-IDMGMTPGAT 722
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 125/275 (45%), Gaps = 9/275 (3%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
PD + + L++A RA A L+D M ++G + YN ++ K + +D
Sbjct: 189 FPDVV----THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFD 244
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ + + M + + DV S+NI + G ++ ++ M+ + V P+ +FS +
Sbjct: 245 KAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQ-HRYVTPDVVSFSCL 303
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSV 346
++ + G+++ A LR ++ D V Y ++ + G E RV + +
Sbjct: 304 IGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGC 363
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
P V Y+ +++ L + + EK+ E + D ++ Y ++GNF+ A
Sbjct: 364 LPDVVT--YNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENA 421
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
F++++ + +P+ ++ +L +G R+ + +A
Sbjct: 422 LQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKA 456
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 165/420 (39%), Gaps = 24/420 (5%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-- 169
V+K L K RR+ A EV+ M+ + + + I + +V V A F+ +
Sbjct: 233 VLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFN--ILIGGFCRVGEVKEAVKFYKEMQH 290
Query: 170 ----PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
PD + + L+ + R +A + +M+ G + Y +++ + +
Sbjct: 291 RYVTPDVVS----FSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAG 346
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
E + EM G DV +YN L+ Q E + M+ ++ V P+ TF
Sbjct: 347 SMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEME-ERGVTPDLCTF 405
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LY 343
+T+ Y + G E A + + + D V Y+ L+ G + +W+
Sbjct: 406 TTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHA 465
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
R + P ++ Y +I S G +E +E + + + R N ++ Y + GN
Sbjct: 466 REILP--NHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNV 523
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVN 463
K + F + ++ P+ ++ TL G+I+E + A + F + RP V
Sbjct: 524 KKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFN----VFNIMEKEMVRPDAVT 579
Query: 464 VINFFKACEEESDMGSKEAFVALLRQPGYRKEK-DYMSLIGLTDEAVAENNKKNDEDSDE 522
E+ +M + G ++ YMSLI A N+K+ + DE
Sbjct: 580 YNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLI--NGHVTAGNSKQAFQLHDE 637
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 114/235 (48%), Gaps = 5/235 (2%)
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
V++ N+M+ Y K E+D ++++SEM+++ + DV ++N+ + + G + +
Sbjct: 155 VNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
+ M ++ + P T++++ K + +KA+E R ++ D ++ L+ +
Sbjct: 215 VDSM-ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFC 273
Query: 329 SVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
VG+ +E + + +R V P V + + +I +R G+++ E + D
Sbjct: 274 RVGEVKEAVKFYKEMQHRYVTPDVVS--FSCLIGLFSRRGEMDHAGAYLREMKGLGLVPD 331
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
I +++ + + G+ +A + ++ G P+ ++ TL G ++ R+L+A
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDA 386
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 112/261 (42%), Gaps = 1/261 (0%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
++++Y + A+ +I +M + + +NV++ + + D ++V M +G
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRG 222
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
++ + +YN L +K + VF M +V P+ +F+ + + ++G+V++A
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMD-QCSVAPDVRSFNILIGGFCRVGEVKEA 281
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
+ + ++ R D V + L+ L+ G+ + + + + Y +I
Sbjct: 282 VKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGG 341
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
R G + ++ +E + D N +++ K+ AE N + E G P+
Sbjct: 342 FCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPD 401
Query: 422 STSWETLAEGHIRERRILEAL 442
++ TL G+ R+ AL
Sbjct: 402 LCTFTTLIHGYCRQGNFENAL 422
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK------DRRV 178
AL++YD R E++R+ + + +++G++ D L++ + +K + +
Sbjct: 265 ALKLYD--RARTEKWRIDP----VTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVI 318
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL+A RA+ A+ + +M + G Y ++ Y + + ++ + EMK
Sbjct: 319 YNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMK 378
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG+ L V YN L+ C G TE+ +FE MK P+ TFS++ T+Y G+V
Sbjct: 379 EKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKV 438
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
+AE L + + L+ YG + +EV R ++
Sbjct: 439 SEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFD 481
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 146/327 (44%), Gaps = 34/327 (10%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS----AEDFFL 167
+K RK R A +++D M RG + I I V+S A ++F
Sbjct: 182 TLKVFRKCRNLDRAEKLFDEMLERGVK------PDNITFSTIISCARVSSLPNKAVEWFE 235
Query: 168 SLPD--TLKDRRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYM 222
+P+ D Y A+++AY RA GN ++ L D+ R + + + + ++ ++ +Y
Sbjct: 236 KMPEFGCHPDDVTYSAMIDAYGRA---GNVDMALKLYDRARTEKWRIDPVTFSTLIRIYG 292
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
+D ++ EMK G++ ++ YN L + G + + +++ M + + P+W
Sbjct: 293 MSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEM-TNNGLQPSW 351
Query: 283 TTFSTMATMYIKMGQVEKAEESL---RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
T++ + Y G+ AE++L + ++ + V Y+ LL++ VG EE +
Sbjct: 352 GTYAALLRAY---GRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAI 408
Query: 340 WNLYRS---VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MM 394
+ +S P + + ++I+ + G + E + L ++ ++P I L ++
Sbjct: 409 FEDMKSSGNCMPD--SWTFSSLITIYSCSGKVSEAEAMLNAML--EAGFEPNIFVLTSLI 464
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPN 421
Y K D+ F+ ++E P+
Sbjct: 465 QCYGKANRTDEVVRTFDRLLELDITPD 491
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 131/338 (38%), Gaps = 45/338 (13%)
Query: 145 DAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD 204
DA I L+ + A FF ++ +Y L + + R AE L D+M +
Sbjct: 145 DAVIVLNNMTNPETALLAFGFFRKRLKPSREVILYNVTLKVFRKCRNLDRAEKLFDEMLE 204
Query: 205 KGYA--------------VHSLP---------------------YNVMMTLYMKIKEYDE 229
+G V SLP Y+ M+ Y + D
Sbjct: 205 RGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDM 264
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ + + R+D +++ + G G+ + V+E MK V PN ++T+
Sbjct: 265 ALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKA-LGVKPNLVIYNTLL 323
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWNLYRS 345
MG+ ++ ++ + + +T P Y LL YG E+ V+ +
Sbjct: 324 D---AMGRAKRPWQA-KNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKE 379
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSY-DPRIANLMMSWYVKEGNFD 404
++ + Y+ +++ A +G E IFE+ S + D + +++ Y G
Sbjct: 380 KGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVS 439
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+AEA N+++E G +PN +L + + + R E +
Sbjct: 440 EAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVV 477
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L++ +A L+ M +K + + +N ++ ++K ++ E E + +M
Sbjct: 260 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 319
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++ I D+++YN ++ +K + +FE M V K P+ T++T+ + K +V
Sbjct: 320 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM-VSKDCFPDVVTYNTLIKGFCKSKRV 378
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYH 356
E E R + R D V Y L+ G + +V+ S V P + + Y
Sbjct: 379 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI--MTYS 436
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L G +E ++F+ + D I M+ K G D F S+ +
Sbjct: 437 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 496
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLK 446
G KPN ++ T+ G +R + EA + LK
Sbjct: 497 GVKPNVVTYNTMISGLCSKRLLQEAYALLK 526
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 124/270 (45%), Gaps = 13/270 (4%)
Query: 179 YGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
YG ++N + RG+ +L L++KM + +N ++ K + D+ ++
Sbjct: 190 YGVVVNGLCK---RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 246
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM+ KGIR +V +Y+ +S S G + M ++K +NPN TF+ + ++K
Sbjct: 247 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKE 305
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLS---LYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G+ +AE+ + R D Y+ L++ ++ + K ++++ + + + FP V
Sbjct: 306 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FMVSKDCFPDVVT 364
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ +I + +E ++F E D ++ +G+ D A+ F
Sbjct: 365 --YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 422
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
++ +G P+ ++ L +G ++ +AL
Sbjct: 423 MVSDGVPPDIMTYSILLDGLCNNGKLEKAL 452
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 124/262 (47%), Gaps = 9/262 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+LLN Y + +A L+D+M + GY ++ + ++ + E ++V M ++
Sbjct: 122 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 181
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G + ++ +Y + ++ +G T+ + M+ K + + F+T+ K V+
Sbjct: 182 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDD 240
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAM 358
A + +E++ + V Y L+S S G+ + ++ + + + + P + ++A+
Sbjct: 241 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT--FNAL 298
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEE 416
I + + G EK++++ +K S DP I N +++ + DKA+ F ++ +
Sbjct: 299 IDAFVKEGKFVEAEKLYDDM--IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 356
Query: 417 GGKPNSTSWETLAEGHIRERRI 438
P+ ++ TL +G + +R+
Sbjct: 357 DCFPDVVTYNTLIKGFCKSKRV 378
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 136/344 (39%), Gaps = 17/344 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+N + R A L+ KM GY + + ++ Y K + ++V +M
Sbjct: 85 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 144
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
E G R D ++ + + + + M V + PN T+ + K G
Sbjct: 145 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDT 203
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNL 353
+ A L ++E+ D V ++ ++ S+ K V NL+ + + P V
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIID---SLCKYRHVDDALNLFKEMETKGIRPNVVT- 259
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y ++IS L G ++ + + K + + N ++ +VKEG F +AE ++ +
Sbjct: 260 -YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 318
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA-CE 472
I+ P+ ++ +L G R+ +A K F +K P V K C+
Sbjct: 319 IKRSIDPDIFTYNSLVNGFCMHDRLDKA----KQMFEFMVSKDCFPDVVTYNTLIKGFCK 374
Query: 473 EESDMGSKEAFVALLRQPGYRKEKDYMSLI-GLTDEAVAENNKK 515
+ E F + + Y +LI GL + +N +K
Sbjct: 375 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 418
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 98/241 (40%), Gaps = 2/241 (0%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
F+ D D Y L+ + +++ + L +M +G ++ Y ++
Sbjct: 352 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 411
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ D + + +M G+ D+ +Y+I L + G EK VF+ M+ + + +
Sbjct: 412 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KSEIKLDIYIY 470
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+TM K G+V+ + + + + V Y+ ++S S +E Y + +
Sbjct: 471 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 530
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
P + Y+ +I + R GD ++ E S + D L+ + + +G DK
Sbjct: 531 DGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM-LHDGRLDK 589
Query: 406 A 406
+
Sbjct: 590 S 590
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 134/326 (41%), Gaps = 10/326 (3%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP--DTLKDRRVY 179
+K L V+ N++G + L + I+ + K+ + A D F +P + D Y
Sbjct: 180 FKFYLHVFG-ANSKGFQPNLLTYNLIIKA--LCKLGQIDRAVDTFREMPLKNCNPDVFTY 236
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
L+N + R A L+D+M+ +G + + +NV++ K + +V M
Sbjct: 237 STLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFL 296
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
KG + +YN + +G +K + E M K V PN T+ T+ +K + E
Sbjct: 297 KGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV-PNQVTYGTIINGLVKQRRAE 355
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
L +E R + Y L+S GK E R+W + P V + Y A
Sbjct: 356 DGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNV--VVYGA 413
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
I L R + E I +E LS + + +M + K+G+ KA + ++ +
Sbjct: 414 FIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQD 473
Query: 418 GKPNSTSWETLAEGHIRERRILEALS 443
+ N L G R+ EAL+
Sbjct: 474 MRHNVVCCSVLLNGLCESGRLREALT 499
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 120/269 (44%), Gaps = 8/269 (2%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ ++ YG ++N V+ R + ++ M ++G + Y+ +++ K + +
Sbjct: 334 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 393
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EM EKG + +V Y ++ ++ E + + M + K PN T+S++
Sbjct: 394 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM-LSKGFLPNAFTYSSLMKG 452
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
+ K G +KA + + S+ + V LL+ G+ E VW L + P
Sbjct: 453 FFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPD 512
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAE 407
V + Y +MI L +G ++ K+F E + P + N++ + ++ N +A
Sbjct: 513 V--VAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAI 570
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRER 436
NS+++EG P+S + E +RER
Sbjct: 571 DLLNSMLDEGCDPDSLTCNIFLET-LRER 598
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 133/337 (39%), Gaps = 9/337 (2%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP 170
R+++ R + +V D M G L+ + + K H A +FF +
Sbjct: 94 RLIENYATSREFHFIHQVLDRMKREGRV--LTETIFILIFKACGKAHLPGEAVNFFHRMA 151
Query: 171 DTLKDRRV---YGALLNAYVRARMRGNA---ELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
+ L ++ + ++LN ++ A L + KG+ + L YN+++ K+
Sbjct: 152 NDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKL 211
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
+ D EM K DV++Y+ ++ + ++ + + M+ + + PN T
Sbjct: 212 GQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCL-PNPVT 270
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
F+ + K G + +A + + + + + V Y+ L+ GK ++ +
Sbjct: 271 FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMV 330
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S + Y +I+ L + E I + I + ++S KEG +
Sbjct: 331 SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSE 390
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
A + + E+G KPN + +G R+ + EA
Sbjct: 391 NAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEA 427
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 130/290 (44%), Gaps = 18/290 (6%)
Query: 162 AEDFFLSL------PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
A +FF S+ PD Y LL+ Y + L + M+ G A + +
Sbjct: 389 AAEFFDSMTAKGHKPDIFS----YCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFT 444
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKV 274
+++ Y K D+ + +EM+++G+ DV +Y+ +S+ G T+ ME ++ V
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM--V 502
Query: 275 DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR-DRVPYHYLLSLYGSVGKK 333
+ + PN +S++ + G + KA+E + + ++ R D V + +++ G+
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRV 562
Query: 334 EEVYRVWNLYRSVF--PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN 391
+ + +++L + PGV + ++++I +G ++ KI + V D N
Sbjct: 563 MDAHDIFDLATDIGERPGV--ITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYN 620
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++ Y K G + F + +G KPN+ ++ + G R R + A
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAA 670
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 125/340 (36%), Gaps = 72/340 (21%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +++A +AR AEL++ +M G ++ Y+ M+ Y + E M
Sbjct: 299 DVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMF 358
Query: 235 SEMKEKGI-----------------------------------RLDVYSYNIWLSSCGSQ 259
EMK++G+ + D++SY L S+
Sbjct: 359 REMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASE 418
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G M G+F MK + N F+ + Y K G V+ A ++ + D V
Sbjct: 419 GCFADMIGLFNSMK-SNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVT 477
Query: 320 YHYLLSLYGSVGKKEEVYRVWN------------LYRSVFPGVTNLG------------- 354
Y ++S + +G+ + +N +Y S+ G G
Sbjct: 478 YSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMI 537
Query: 355 -----------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+ ++I+SL + G + IF+ + N ++ Y G
Sbjct: 538 NKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKM 597
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
DKA +++ G +P+ ++ TL +G+ + RI + L+
Sbjct: 598 DKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLT 637
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 112/266 (42%), Gaps = 3/266 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHS--LPYNVMMTLYMKIKEYDEVESMVSE 236
Y +L A M A L+ M +G A + Y+ ++ + E + S+ E
Sbjct: 231 YSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHE 290
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M +G++ DV +YN+ + + + +K E V M D A P+ T+S M Y +G
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGA-QPDTVTYSCMIHGYATLG 349
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++++A + R ++ R + V + L+ G+ +E ++ + Y
Sbjct: 350 RLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYC 409
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ A G M +F S + + + +++ Y K G D A F + ++
Sbjct: 410 TLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQ 469
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G P+ ++ T+ R R+ +A+
Sbjct: 470 GVSPDVVTYSTVISTFSRMGRLTDAM 495
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 153/405 (37%), Gaps = 61/405 (15%)
Query: 113 VKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF--FLSLP 170
+ L K R K A E +D M +G + + +HG AS F + L
Sbjct: 377 LASLCKHGRSKEAAEFFDSMTAKGHKPDI--------FSYCTLLHGYASEGCFADMIGLF 428
Query: 171 DTLKDR------RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI 224
+++K V+ L++AY + M +A L+ +M+ +G + + Y+ +++ + ++
Sbjct: 429 NSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRM 488
Query: 225 KEYDEV-----------------------------------ESMVSEMKEKGI-RLDVYS 248
+ + +VSEM KGI R D+
Sbjct: 489 GRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVF 548
Query: 249 YNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
++ ++S G +F+L D P TF+++ Y +G+++KA + L +
Sbjct: 549 FSSVINSLCKDGRVMDAHDIFDL-ATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAM 607
Query: 309 ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDI 368
E D V Y+ LL Y G+ + ++ + + Y M++ L R G
Sbjct: 608 EVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRT 667
Query: 369 EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
K F E + ++ I +++ + D+A F + K + T T+
Sbjct: 668 VAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTM 727
Query: 429 AEGHIRERRILEALSCLKGAFAAEGAKSWRPK----PVNVINFFK 469
+ +R EA K FA A P V +IN K
Sbjct: 728 INAMYKVQRKEEA----KELFATISASGLLPNESTYGVMIINLLK 768
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 64/158 (40%), Gaps = 1/158 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+YG +L R A +L K+ N M+ K++ +E + + + +
Sbjct: 688 IYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATI 747
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G+ + +Y + + + G E +F M+ + P + + M ++ G+
Sbjct: 748 SASGLLPNESTYGVMIINLLKDGGVEDANNMFSSME-KSGIVPGSRLLNRIIRMLLEKGE 806
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ KA L +V+ + + +LSL+ GK +E
Sbjct: 807 IAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQE 844
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 121/266 (45%), Gaps = 5/266 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +LLN Y ++ +A L+D+M + GY + + ++ + E ++V
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M ++G + D+ +Y ++ +G + + M+ + + N F+T+ K
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR-IKANVVIFNTIIDSLCK 270
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
VE A + +E++ + V Y+ L++ + G+ + R+ + L + + P V
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
++A+I + + G + EK+ EE + D NL+++ + D+A+ F
Sbjct: 331 --FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRI 438
++ + PN ++ TL G + +R+
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRV 414
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 120/277 (43%), Gaps = 11/277 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D YG ++N + RG+ +L L++KM + + +N ++ K + +
Sbjct: 222 DLVTYGTVVNGLCK---RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ +EM+ KGIR +V +YN ++ + G + M ++K +NPN TF+ +
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM-LEKKINPNVVTFNALIDA 337
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPG 349
+ K G++ +AE+ + R D + Y+ L++ + + +E +++ S P
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y+ +I+ + +E ++F E + ++ + + G+ D A+
Sbjct: 398 IQT--YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
F ++ + ++ L G ++ AL K
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFK 492
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 135/348 (38%), Gaps = 57/348 (16%)
Query: 134 NRGERFRLSASDAAIQ--LDLIAKVHGVASAEDFFLSL------PDTLKDRRVYGALLNA 185
N+ E R+ A+ +D + K V A D F + P+ + Y +L+N
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV----TYNSLINC 302
Query: 186 YVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLD 245
+A L+ M +K + + +N ++ + K + E E + EM ++ I D
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 246 VYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL 305
+YN+ ++ ++ + +F+ M V K PN T++T+ + K +VE E
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFM-VSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 306 RRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN------------LYRSVFPGVTNL 353
R + R + V Y ++ + G + V+ Y + G+ +
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 354 G-----------------------YHAMISSLARIGDIEGMEKIFEEW-LSVKSSYDPRI 389
G Y+ MI + + G K+ E W L S P +
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG------KVGEAWDLFCSLSIKPDV 535
Query: 390 A--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
N M+S + +A+ F + E+G PNS ++ TL ++R+
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 163/393 (41%), Gaps = 40/393 (10%)
Query: 91 ASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQL 150
A LN+ G + + ++ +L KF + A +Y M N G + L + I
Sbjct: 148 ADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI-- 205
Query: 151 DLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYA 208
++++K V AE + D D Y +L+ + R R A + D+M +G
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 265
Query: 209 VHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGV 268
+S+ Y+ ++ DE M+ EM EKGI VY+Y + +++ + E+ +
Sbjct: 266 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 325
Query: 269 FELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
MK + PN T++ + + ++G++E A ++ + V Y+ L++
Sbjct: 326 VARMK-KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384
Query: 329 SVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS----- 383
G+ ++++ Y+ +I L GDIE +FE+ L +
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444
Query: 384 SYD---------------PRIANLM---------------MSWYVKEGNFDKAEAFFNSI 413
+Y+ R+ +LM +S + K G + A +F +
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+E G PN S+ L +GH ++ ++ ALS LK
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 131/332 (39%), Gaps = 44/332 (13%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ EL R+ AL+++ WM G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHG----------------------------------- 403
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+L + + Y ++ A +L +KM G + YN ++ Y+ +
Sbjct: 404 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 463
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ MKE G D ++YN +S G E F+ M V+ +NPN +++ +
Sbjct: 464 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM-VECGLNPNPVSYTALIDG 522
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
+ K G+V+ A L+R+E + Y+ +++ + E ++ + + + + P
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN 582
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
V + Y +I L R G + KIF + K + + ++ +EG D+AE
Sbjct: 583 V--ITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE-- 638
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ E G +P ++ TL G R+ R EA
Sbjct: 639 --RMSEIGCEPTLDTYSTLVSGLCRKGRFYEA 668
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 111/254 (43%), Gaps = 11/254 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y A++N + AE + DKM ++G + + Y ++ + + +M+
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++ ++Y+Y+ + +G ++ E + E+ P T+ST+ + + G+
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEAERMSEI-----GCEPTLDTYSTLVSGLCRKGRF 665
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG---Y 355
+AE+ ++ ++ R DR Y+ LL + K EV ++ S+ L Y
Sbjct: 666 YEAEQLVKDMKERGFCPDREIYYSLLIAHC---KNLEVDHALKIFHSIEAKGFQLHLSIY 722
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
A+I +L + G +E + +F+ L + + D + +++ +KEG D + +
Sbjct: 723 RALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMES 782
Query: 416 EGGKPNSTSWETLA 429
+ PN ++ L
Sbjct: 783 KNFTPNIQTYVILG 796
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL----SLYGSVGKKEEVYRV 339
F+ + I M + + EE +RRV + + + + L +L + K E V
Sbjct: 123 VFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGA 182
Query: 340 WNLYRSVF-PGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
NLY+ + G+ + L ++ +I+ L++ G + E I + S D ++
Sbjct: 183 RNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 242
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ + N D A F+ +++EG PNS ++ TL G E R+ EAL L+
Sbjct: 243 HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLE 292
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 147/359 (40%), Gaps = 15/359 (4%)
Query: 90 SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQ 149
S SVL K G L ++K L K +L +D + +G F+++
Sbjct: 186 SFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG--FQMNQVSYGTL 243
Query: 150 LDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
L+ + K+ A + D T D +Y +++ + ++ A +M +G
Sbjct: 244 LNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGI 303
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ Y+ ++ + + S+++EM K I DVY+Y I + + +G ++ +
Sbjct: 304 FPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKN 363
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ +M + V PN T+ST+ Y +G+V A++ + Y+ +++
Sbjct: 364 LLGVM-TKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMIN-- 420
Query: 328 GSVGKKEEVYRVWNLYR-----SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ K + V NL R +V P Y+++I L + G I + +E
Sbjct: 421 -GLCKGKSVDEAMNLLREMLHKNVVPNTVT--YNSLIDGLCKSGRITSALDLMKELHHRG 477
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D ++ K N DKA A F + E G +PN ++ L +G + R+ A
Sbjct: 478 QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNA 536
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 155/366 (42%), Gaps = 33/366 (9%)
Query: 87 QLGSASVLNDWEKGGRSLTKWELCRVVKE----------------LRKFRRYKHALEVYD 130
Q+ ++LN K G + +L R++++ L K + A + Y
Sbjct: 237 QVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYT 296
Query: 131 WMNNRGERFR--LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVR 188
MN+RG F ++ S L ++ G S + ++L + D Y L++A +
Sbjct: 297 EMNSRG-IFPDVITYSTLICGFCLAGQLMGAFSLLNE-MTLKNINPDVYTYTILIDALCK 354
Query: 189 ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYS 248
A+ L+ M +G + + Y+ +M Y + E + + M + + V S
Sbjct: 355 EGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCS 414
Query: 249 YNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
YNI ++ C + E M + E++ K V PN T++++ K G++ A + ++
Sbjct: 415 YNIMINGLCKGKSVDEAMNLLREMLH--KNVVPNTVTYNSLIDGLCKSGRITSALDLMKE 472
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNLGYHAMISSL 362
+ R D + Y SL + K + + + L+ R + P Y A+I L
Sbjct: 473 LHHRGQPADVITYT---SLLDGLCKNQNLDKAIALFMKMKERGIQP--NKYTYTALIDGL 527
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
+ ++ +K+F+ L D N+M+ KEG D+A A + + + G P++
Sbjct: 528 CKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDA 587
Query: 423 TSWETL 428
++E +
Sbjct: 588 VTFEII 593
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 138/326 (42%), Gaps = 23/326 (7%)
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGS 258
DK+ +G+ ++ + Y ++ KI E ++ ++++ R DV YN + C
Sbjct: 226 DKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKD 285
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
+ E + E+ + + P+ T+ST+ + GQ+ A L + + D
Sbjct: 286 KLVNEAYDFYTEMN--SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVY 343
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y L+ GK +E + + V P V Y ++ +G++ ++IF
Sbjct: 344 TYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVT--YSTLMDGYCLVGEVHNAKQIFH 401
Query: 377 EWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
V++ +P + N+M++ K + D+A ++ + PN+ ++ +L +G +
Sbjct: 402 AM--VQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCK 459
Query: 435 ERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACE---EESDMGSKEAFVALLRQPG 491
RI AL +K R +P +VI + + + ++ A +++ G
Sbjct: 460 SGRITSALDLMK-------ELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG 512
Query: 492 YRKEK-DYMSLI-GLTDEAVAENNKK 515
+ K Y +LI GL A +N +K
Sbjct: 513 IQPNKYTYTALIDGLCKGARLKNAQK 538
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++ L K R AL++ +++RG+ + + LD + K + A F+ + +
Sbjct: 453 LIDGLCKSGRITSALDLMKELHHRGQPADVITYTSL--LDGLCKNQNLDKAIALFMKMKE 510
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
++ Y AL++ + NA+ L + KG + YNVM+ K DE
Sbjct: 511 RGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDE 570
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
+M S+M++ G D ++ I + S + +K E + M
Sbjct: 571 ALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEM 613
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 127/270 (47%), Gaps = 9/270 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+YG ++N + A L+ M ++ Y +++ + K D S+++EM
Sbjct: 180 MYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEM 239
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K+K I D+++Y+ + + E + +F L + + PN TF+++ K G+
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLF-LEMIHLNIYPNVCTFNSVIDGLCKEGK 298
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
VE AEE +R + + D + Y+ ++ YG G+ + +++ + +S+ P + + Y
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDI--ISY 356
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSI 413
+ +I+ AR I+ ++ E + P I N+++ + G A+ FF+ +
Sbjct: 357 NILINGYARQKKIDEAMQVCREI--SQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEM 414
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ G P+ + TL G+ + + EA+S
Sbjct: 415 LSAGHIPDLYTHCTLLGGYFKNGLVEEAMS 444
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 111/246 (45%), Gaps = 14/246 (5%)
Query: 208 AVH---SLPYN------VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGS 258
A+H +PYN ++ L+ + K D V ++E + Y ++
Sbjct: 131 AIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCK 190
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
+G T+K + LM+ + PN T++ + + K G ++ A L ++ + D
Sbjct: 191 KGHTQKAFDLLRLME-QGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIF 249
Query: 319 PYHYLLSLYGSVGKKEEVYRVW--NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y L+ + + E V ++ ++ +++P V ++++I L + G +E E+I
Sbjct: 250 TYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCT--FNSVIDGLCKEGKVEDAEEIMR 307
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ D N+++ Y G D+A F+S+I + +P+ S+ L G+ R++
Sbjct: 308 YMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQK 367
Query: 437 RILEAL 442
+I EA+
Sbjct: 368 KIDEAM 373
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 108/272 (39%), Gaps = 42/272 (15%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y +++ Y A + D M +K + YN+++ Y + K+ DE
Sbjct: 316 PDVI----TYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDE 371
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ E+ +KG++ + + N+ L G T+ + F+ M + P+ T T+
Sbjct: 372 AMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHI-PDLYTHCTLL 430
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
Y K G VE+A ++E R +E+
Sbjct: 431 GGYFKNGLVEEAMSHFHKLERR---------------------RED-------------- 455
Query: 350 VTNLG-YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
TN+ Y A+I L + G ++ FE+ + D M+S Y +EG D+A+
Sbjct: 456 -TNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKD 514
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ + G ++ ++ + G +R ++ E
Sbjct: 515 MLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/306 (17%), Positives = 125/306 (40%), Gaps = 38/306 (12%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
T + R Y +++A+ + M A L+++M+ K Y+ ++ K+ +++ V
Sbjct: 209 TKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVR 268
Query: 232 SMVSEMK-----------------------------------EKGIRLDVYSYNIWLSSC 256
++ EM EKG+ DV +YN+ +
Sbjct: 269 TLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGY 328
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
G +G ++ +F+ M ++K++ P+ +++ + Y + ++++A + R + +
Sbjct: 329 GLRGQVDRAREIFDSM-INKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPS 387
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA-MISSLARIGDIEGMEKIF 375
V + LL +G+ + ++ S + +L H ++ + G +E F
Sbjct: 388 IVTCNVLLHGLFELGRTKSAQNFFDEMLSA-GHIPDLYTHCTLLGGYFKNGLVEEAMSHF 446
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+ + + +I ++ K G DKA A F + G P+ ++ + G+ +E
Sbjct: 447 HKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506
Query: 436 RRILEA 441
+ EA
Sbjct: 507 GLLDEA 512
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 2/269 (0%)
Query: 165 FFLSLPDTLKDRRV-YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
F L + + +K V Y +LL AY M A + + ++ G + Y ++ Y +
Sbjct: 211 FDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGR 270
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
+ ++ + ++MK+ + + SYN + + GS G ++ G+ M+ D + P+
Sbjct: 271 SAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKD-GIQPDVV 329
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
+ ST+ + Q+ + E L SR + V Y+ + Y S G E+ ++
Sbjct: 330 SISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSM 389
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
R + Y+ +IS +++G + FE+ + K S + + ++ Y+K+G
Sbjct: 390 RESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKL 449
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+AE+ F+S+ + G P+ ++ TL + +
Sbjct: 450 SEAESTFSSMKKSGCFPDVLTYTTLIQAY 478
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 117/284 (41%), Gaps = 8/284 (2%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
++P T R Y ++NA A A L KM + G + +N++++ +Y
Sbjct: 76 AIPPT---RTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQY 132
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFS 286
+ S MK + D ++ NI + G + +F M+ + P+ T++
Sbjct: 133 SKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYT 192
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR-- 344
++ Y GQVE + + + + V Y+ LL Y S G E ++NL +
Sbjct: 193 SIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ P + + Y +++++ R E ++F + + N ++ Y G
Sbjct: 253 GLRPDI--VSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGA 448
+A + + ++G +P+ S TL R R+I + L+ A
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAA 354
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 3/239 (1%)
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
Y + Y +M+ LY + + D+ + EM+E + D YN + + G
Sbjct: 7 YCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAI 66
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
+ E M + A+ P TT++ + G +KA E +++ G D V ++ +LS
Sbjct: 67 NIMEDM-LRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSA 125
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
+ + + + + + + +I L +IG ++F ++
Sbjct: 126 LKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCP 185
Query: 387 PRIANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
P + +M Y G + +A F+ ++ EG KPN ++ +L + EAL+
Sbjct: 186 PDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALA 244
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 94/230 (40%), Gaps = 5/230 (2%)
Query: 113 VKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT 172
+K F Y+ ALE+Y M R + A I + +K+ + FF + D+
Sbjct: 370 IKSYLSFGDYEKALELYTSM--RESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDS 427
Query: 173 --LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ VY +L+ +Y++ AE M+ G L Y ++ Y +
Sbjct: 428 KVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRA 487
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ EM+ GI D + + + G E++ + E MK K++ N ++ +
Sbjct: 488 WDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMK-KKSIPLNQKSYFEIIA 546
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
+ + A E + ++S ++ +++L+ G GK E + +++
Sbjct: 547 SCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLF 596
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 176/411 (42%), Gaps = 38/411 (9%)
Query: 96 DWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAK 155
D + G SL + ++ L K ++ A +V++ M R ++ +
Sbjct: 213 DMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRR------HCEPDTFTYTIMIR 266
Query: 156 VHGVASAEDFFLSLPDTLKDRR------VYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+ G A D L+L + ++ Y ++ A + RM A LL KM + G
Sbjct: 267 MTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQP 326
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+ Y+V++ + + + ++++++V EM +K + +Y+Y ++ + G + + +F
Sbjct: 327 NEFTYSVLLNVLVAEGQLNKLDNIV-EMSKKYMNKQIYAY--FVRTLSKLGHSSEAHRLF 383
Query: 270 ELM-----KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
M K DK + +M G++ +A + L R + D + Y+
Sbjct: 384 CNMWNVHDKGDK------DAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYN--- 434
Query: 325 SLYGSVGKKEEVYRVWNLYRSV---FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
+++ ++G+ ++V + +LY + P Y+ +ISS R G ++ KIFEE +
Sbjct: 435 TVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENS 494
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D N +++ K G+ D+A F + E+G P+ ++ TL E + ++ A
Sbjct: 495 NCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMA 554
Query: 442 LSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEA-FVALLRQPG 491
S L AEG P V N C E S ++ A L+Q G
Sbjct: 555 CS-LFDEMIAEGCS---PNLVTY-NILLDCLERSGRTAEAVDLYAKLKQQG 600
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
SL D ++ R V G++ + G+ + + ++ G ++ Y ++ Y+++++
Sbjct: 145 SLLDDMEKRGVKGSISTVNILIGFFGDLDRCVGLVKKWGLRFNAYSYKCLLQGYLRLRDC 204
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
D+ + +M G LD++++N+ L + +K VFE MK + P+ T++
Sbjct: 205 DKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMK-RRHCEPDTFTYTI 263
Query: 288 MATMYIKMGQVEKAEESL 305
M M G+ K +ESL
Sbjct: 264 MIRM---TGKAGKTDESL 278
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+++Y RA +A + +++ + + YN ++ K + DE
Sbjct: 464 DIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRF 523
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+EKG+ DV +Y+ + G E +F+ M + + +PN T++ + +
Sbjct: 524 KEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEM-IAEGCSPNLVTYNILLDCLER 582
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYL 323
G+ +A + +++ + D + Y L
Sbjct: 583 SGRTAEAVDLYAKLKQQGLTPDSITYAVL 611
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 90/215 (41%), Gaps = 14/215 (6%)
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK-AVNPNWTTF 285
+++ ES++ +M+++G++ + + NI + G G ++ G+ V K + N ++
Sbjct: 140 FEQTESLLDDMEKRGVKGSISTVNILI---GFFGDLDRCVGL-----VKKWGLRFNAYSY 191
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ Y+++ +KA + D ++ LL K ++ Y+V+ +
Sbjct: 192 KCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKR 251
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
Y MI + G + +F+ L + + N M+ K DK
Sbjct: 252 RHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADK 311
Query: 406 AEAFFNSIIEEGGKPNSTSWETL-----AEGHIRE 435
A F+ ++E G +PN ++ L AEG + +
Sbjct: 312 AVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNK 346
>gi|356536414|ref|XP_003536733.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 553
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 161/360 (44%), Gaps = 27/360 (7%)
Query: 89 GSA-SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRG-------ERFR 140
GSA SVL+ + +++ K L + ++ +++ +E+ DW+ + + F
Sbjct: 81 GSAVSVLSSEKINNQNIPKDLLVGTLIRFKQLKKWHLVVEILDWLRTQNWWDFGKMDFFM 140
Query: 141 LSASDAAI-QLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLI 199
L + + + KV G+ + + +P+ + AL+ AY + NAE +
Sbjct: 141 LITAYGKLGDFNGAEKVLGLMNKNGY---VPNVVSQT----ALMEAYGKGGRYNNAEAIF 193
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM---KEKGIRLDVYSYNIWLSSC 256
+M+ G + Y +++ +++ +Y E E + + + ++ D +N+ +
Sbjct: 194 RRMQKWGPEPSAFTYQIILKTFVQGNKYREAEELFDNLLNDENSPLKPDQKMFNMMIYMY 253
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
GS EK F LM ++ + T++++ + +V + ++R + R D
Sbjct: 254 KKAGSYEKARKTFALM-AERGIQQTTVTYNSLMSFETDYKEVSNIYDQMQRADLR---PD 309
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
V Y L+S YG ++EE V+ T Y+ ++ + + G +E + +F+
Sbjct: 310 VVSYALLVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVEQAQTVFK 369
Query: 377 EWLSVKSSYDPRIAN--LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+ Y P + + M+S YV + + AE FF +I++ +PN ++ TL +G+ +
Sbjct: 370 SMR--RDRYFPDLCSYTTMLSAYVNADDMEGAEKFFKRLIQDDFEPNVVTYGTLIKGYAK 427
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 146/347 (42%), Gaps = 15/347 (4%)
Query: 89 GSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI 148
G+ VL K G +++ K RY +A ++ M G SA I
Sbjct: 153 GAEKVLGLMNKNGYVPNVVSQTALMEAYGKGGRYNNAEAIFRRMQKWGPE--PSAFTYQI 210
Query: 149 QLDLIAKVHGVASAEDFFLSLPDT----LK-DRRVYGALLNAYVRARMRGNAELLIDKMR 203
L + + AE+ F +L + LK D++++ ++ Y +A A M
Sbjct: 211 ILKTFVQGNKYREAEELFDNLLNDENSPLKPDQKMFNMMIYMYKKAGSYEKARKTFALMA 270
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
++G ++ YN +M+ +Y EV ++ +M+ +R DV SY + +S+ G E
Sbjct: 271 ERGIQQTTVTYNSLMSFET---DYKEVSNIYDQMQRADLRPDVVSYALLVSAYGKARREE 327
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+ VFE M +D V P ++ + + G VE+A+ + + D Y +
Sbjct: 328 EALAVFEEM-LDAGVRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTM 386
Query: 324 LSLYGSVGKKEEVYRVWN-LYRSVF-PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
LS Y + E + + L + F P V G +I A+I D+E + K +EE L
Sbjct: 387 LSAYVNADDMEGAEKFFKRLIQDDFEPNVVTYG--TLIKGYAKINDLEMVMKKYEEMLVR 444
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ I +M Y K G+FD A +F + G P+ + L
Sbjct: 445 GIKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVL 491
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 114/249 (45%), Gaps = 5/249 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ Y M A + +MR+KG A + YN+++ + K++ E +V ++
Sbjct: 266 YNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G+ ++ +YNI ++ + +F +K ++P T++T+ Y K+ +
Sbjct: 326 KVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLK-SSGLSPTLVTYNTLIAGYSKVENL 384
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYH 356
A + ++ +E R +V Y L+ + + E+ + +L + P V Y
Sbjct: 385 AGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYT--YS 442
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L G+++ K+F+ + + I N M+ Y KEG+ +A N +++
Sbjct: 443 VLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQS 502
Query: 417 GGKPNSTSW 425
G PN S+
Sbjct: 503 GMVPNVASF 511
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 118/267 (44%), Gaps = 6/267 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y ++NAYV + A + M +G+ S +N ++ L ++ +D+ + +E+
Sbjct: 91 LYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL 150
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K K + LD YS+ I + C G K + +++ + ++PN ++T+ K G
Sbjct: 151 KSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLE-EFGLSPNVVIYTTLIDGCCKDGN 208
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRS-VFPGVTNLGY 355
V A+ ++ + Y L++ + G + E ++++ N+ RS + P Y
Sbjct: 209 VMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA--YAY 266
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +IS G ++ K+F E + N+++ + F +A + + +
Sbjct: 267 NCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
G PN ++ L G R++ A+
Sbjct: 327 VGLSPNIVTYNILINGFCDVRKMDSAV 353
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 130/322 (40%), Gaps = 41/322 (12%)
Query: 159 VASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMM 218
+A E+F LS P+ + +Y L++ + A+ L KM G + Y+V+M
Sbjct: 181 LAMLEEFGLS-PNVV----IYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLM 235
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV 278
+ K E M MK GI + Y+YN +S + G +K VF M+ +K +
Sbjct: 236 NGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMR-EKGI 294
Query: 279 NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYR 338
T++ + + + +A + + +V + V Y+ L++ + V K + R
Sbjct: 295 ACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVR 354
Query: 339 VWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW-------------------- 378
++N +S T + Y+ +I+ +++ ++ G + +E
Sbjct: 355 LFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFA 414
Query: 379 -------------LSVKSSYDPRI--ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNST 423
L KS P + ++++ GN +A F S+ E +PNS
Sbjct: 415 RLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSV 474
Query: 424 SWETLAEGHIRERRILEALSCL 445
+ T+ G+ +E AL L
Sbjct: 475 IYNTMIHGYCKEGSSYRALRLL 496
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 126/262 (48%), Gaps = 21/262 (8%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+N A++L+D+M + + YN ++ Y K K +E + +
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKV--DKAVNPNWTTFSTMATMYIKMG 296
++G+ +V ++N L G KME F L KV +K PN +T++ + + + G
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFG---KMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREG 457
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
++E+ + L ++ R D V Y+ L+S + + ++ R+ + L + + P ++L
Sbjct: 458 KMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKP--SHLT 515
Query: 355 YHAMISSLARIGDIEG---MEKIFEE---WLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
Y+ +++ G++ + K E+ W +V + N+++ Y ++G + A
Sbjct: 516 YNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVT------YNVLIQGYCRKGKLEDANG 569
Query: 409 FFNSIIEEGGKPNSTSWETLAE 430
N ++E+G PN T++E + E
Sbjct: 570 LLNEMLEKGLIPNRTTYEIIKE 591
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 8/244 (3%)
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
D Y + L N +++ +K E+ VE + EM + I ++ ++N ++ G
Sbjct: 188 DYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLN 247
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK---AEESLRRVESRITGRDRVPY 320
K V + MKV PN T++T+ Y KMG+V K A+ L+ + + V +
Sbjct: 248 KAGDVVDDMKV-WGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTF 306
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
+ L+ + +V+ +S T + Y+++++ L G + + + +E LS
Sbjct: 307 NVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLS 366
Query: 381 VKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
S+ P + N +++ Y K+ ++A F++I ++G PN ++ TL G+ + ++
Sbjct: 367 --SNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKM 424
Query: 439 LEAL 442
EA
Sbjct: 425 EEAF 428
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 122/266 (45%), Gaps = 10/266 (3%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LL+A V+ G E + +M + + + + +N ++ K+ + ++ +V +MK G
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVE 299
+V +YN + G KM ++K V+ V+PN TF+ + + K +
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHA 357
A + ++S+ V Y+ L++ + GK E + + L ++ P V + Y+A
Sbjct: 321 AALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV--ITYNA 378
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIE 415
+I+ + +E ++F+ K P + N ++ Y K G ++A ++E
Sbjct: 379 LINGYCKKKLLEEARELFDNI--GKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLE 436
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
+G PN++++ L G RE ++ E
Sbjct: 437 KGFLPNASTYNCLIVGFCREGKMEEV 462
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ LL+ Y + A LL M +KG+ ++ YN ++ + + + +EV+++++EM+
Sbjct: 411 FNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQ 470
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+G++ D +YNI +S+ + +K + + M +DK + P+ T++ + Y G +
Sbjct: 471 CRGVKADTVTYNILISAWCEKKEPKKAARLIDEM-LDKGLKPSHLTYNILLNGYCMEGNL 529
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
A +++E + V Y+ L+ Y GK E+ + N L + + P T Y
Sbjct: 530 RAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTT--YE 587
Query: 357 AMISSLARIG---DIEG 370
+ + G DIEG
Sbjct: 588 IIKEEMMEKGFLPDIEG 604
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 127/305 (41%), Gaps = 43/305 (14%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKI----KEY------- 227
+ ++N + A ++D M+ G+ + + YN ++ Y K+ K Y
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILK 292
Query: 228 DEVESMVS---------------------------EMKEKGIRLDVYSYNIWLSSCGSQG 260
+ VE+ VS EM+ +G++ V +YN ++ ++G
Sbjct: 293 EMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG 352
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
+ + + + M + + PN T++ + Y K +E+A E + + + + +
Sbjct: 353 KLNEAKVLLDEM-LSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITF 411
Query: 321 HYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
+ LL Y GK EE + + L + P + Y+ +I R G +E ++ + E
Sbjct: 412 NTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAST--YNCLIVGFCREGKMEEVKNLLNEM 469
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
D N+++S + ++ KA + ++++G KP+ ++ L G+ E +
Sbjct: 470 QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNL 529
Query: 439 LEALS 443
AL+
Sbjct: 530 RAALN 534
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++A+ + A LID+M DKG L YN+++ Y ++
Sbjct: 477 DTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLR 536
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M+++G +V +YN+ + +G E G+ M ++K + PN TT+ + ++
Sbjct: 537 KQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEM-LEKGLIPNRTTYEIIKEEMME 595
Query: 295 MGQVEKAEESL 305
G + E L
Sbjct: 596 KGFLPDIEGHL 606
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 82/185 (44%), Gaps = 15/185 (8%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L + Y L+ + R + L+++M+ +G ++ YN++++ + + KE +
Sbjct: 440 LPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAAR 499
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
++ EM +KG++ +YNI L+ +G+ + + M+ + N T++ + Y
Sbjct: 500 LIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME-KEGRWANVVTYNVLIQGY 558
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
+ G++E A L + + +R Y + KEE+ + + P +
Sbjct: 559 CRKGKLEDANGLLNEMLEKGLIPNRTTYEII---------KEEM-----MEKGFLPDIEG 604
Query: 353 LGYHA 357
YHA
Sbjct: 605 HLYHA 609
>gi|297796623|ref|XP_002866196.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
lyrata]
gi|297312031|gb|EFH42455.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
lyrata]
Length = 821
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 153/355 (43%), Gaps = 40/355 (11%)
Query: 124 HALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT---LKDRRVYG 180
+A+EV + M N+ + ++ + K+ A FF + D+ + + Y
Sbjct: 3 NAIEVLEMMTNKKVNYPFDNFVSSAVISGFCKIGKPELALGFFETAVDSGVLVPNLVTYT 62
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
A+++A + L+ ++ D+G+ + Y+ + Y K + +M EK
Sbjct: 63 AVVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVEK 122
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
GI DV SY+I + +G+ EK G+ M + + + PN T++ + K G++E
Sbjct: 123 GINRDVVSYSILIDGLSREGNIEKALGLLGKM-IKEGIEPNLITYTAIIRGLCKKGKLED 181
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL---------------YRS 345
A R+ S D Y ++L + KK + R +++ Y +
Sbjct: 182 AFVLFDRILSFGIEVDEFLY---VTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNT 238
Query: 346 VFPGVTNLG------------------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
V G+ G Y ++ S ++ +I+ + +I ++ K D
Sbjct: 239 VINGLCKAGRVSEADDISKGVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDL 298
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ N+++ ++ G + +A+A + ++ E G P++ ++ T+ EG+ + +I +AL
Sbjct: 299 VMCNILLKAFLLVGAYGEADALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDAL 353
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 7/208 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++N + A L + + KG ++++ YN ++ + E + +
Sbjct: 509 YTIIINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLFDSLD 568
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G+ +Y I + + +G E + + M V K + PN ++++ Y K+GQ
Sbjct: 569 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM-VSKGLVPNILIYNSIVDGYCKLGQT 627
Query: 299 EKAEESLRRVESRITGR---DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
E A L R ++ GR D ++ Y G EE RV+ ++ LG+
Sbjct: 628 EDAMRVLSR---KMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEENISADFLGF 684
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKS 383
+I G +E + E L +S
Sbjct: 685 LFLIKCFCTKGRMEEARGLLREMLVSES 712
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
KG + Y+ ++ Y+K++ D V + E I +D+ NI L + G+ +
Sbjct: 257 KGVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDLVMCNILLKAFLLVGAYGE 316
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
+ ++ M + + P+ T++TM Y K GQ+E A E
Sbjct: 317 ADALYRAMP-EMGLTPDTATYATMIEGYCKTGQIEDALE 354
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 119/257 (46%), Gaps = 5/257 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y AL++ + +A L ++ ++G + ++ YN ++ + + EV ++++M
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ + D Y++NI + + +G + +GV +M + P+ T++ + Y
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS-KRGEKPDIVTYNALMEGYCSREN 315
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
V +A E R+ R D + Y+ L+ Y +E ++ +++ P + + Y
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS--Y 373
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++I L G I ++K+ +E D N+++ KEG +A +++
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 416 EGGKPNSTSWETLAEGH 432
+G KPN ++ + +G+
Sbjct: 434 KGVKPNIVTYNAMMDGY 450
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 9/277 (3%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D+ YG L+N + A L+ +M + + Y+ ++ K +
Sbjct: 157 LFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALG 216
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ S++ E+GI LD +YN + C S G +++ + M V + V+P+ TF+ +
Sbjct: 217 LCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM-VRENVDPDDYTFNILIDAL 275
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGV 350
K G++ +A+ L + R D V Y+ L+ Y S E ++N + R + P V
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEA 408
N Y+ +I + ++ +F+E + P IA N ++ G +
Sbjct: 336 LN--YNVLIDGYCKTKMVDEAMVLFKEL--CNKNLVPTIASYNSLIDGLCNSGRISHVKK 391
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ + P+ ++ L + +E RILEAL L
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL 428
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 115/274 (41%), Gaps = 13/274 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY----MKIKEYDEVESMV 234
+ L+N Y A L+ + GY + + +N ++ + M K D ++++
Sbjct: 93 FTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLL 152
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++ G D ++Y ++ G + + + M+ +V PN +S + K
Sbjct: 153 AQ----GYLFDQFTYGTLINGLSKNGQIKAALHLLQEME-KSSVQPNLVMYSALIDGLCK 207
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G V A ++ R D V Y+ L+ SVG+ +EV ++ + +V P +
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDP--DD 265
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
++ +I +L + G I + + D N +M Y N +A FN
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNR 325
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+++ G +P+ ++ L +G+ + + + EA+ K
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFK 359
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 11/269 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L++A + A+ ++ M +G + YN +M Y + E +
Sbjct: 264 DDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELF 323
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ M ++G+ DV +YN+ + C ++ E M EL +K + P +++++
Sbjct: 324 NRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL--CNKNLVPTIASYNSLIDGLC 381
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVT 351
G++ ++ L + D V Y+ L+ G+ E V + + V P +
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIV 441
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LMMSWYVKEGNFDKAEAF 409
Y+AM+ ++ + IF VKS +P I N ++++ Y K D+A
Sbjct: 442 T--YNAMMDGYCLRNNVNVAKDIFNRM--VKSGLEPDILNYNVLINGYCKTEMVDEAIVL 497
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRI 438
F + + P+ S+ +L +G RI
Sbjct: 498 FKEMRHKNLIPDIASYNSLIDGLCNLGRI 526
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 14/203 (6%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-- 169
++ L K R AL V M +G + + +A +D + V A+D F +
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA--MMDGYCLRNNVNVAKDIFNRMVK 468
Query: 170 ----PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
PD L Y L+N Y + M A +L +MR K YN ++ +
Sbjct: 469 SGLEPDILN----YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
V+ ++ EM + G DV +YNI L + +K +F ++ + + P++ T
Sbjct: 525 RIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR--QIVEGIWPDFYTN 582
Query: 286 STMATMYIKMGQVEKAEESLRRV 308
+ K +++ AE++L+ +
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHL 605
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 126/292 (43%), Gaps = 17/292 (5%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +YG L++ + + L D+M KG + + + Y+ ++ ++ ++ E +++
Sbjct: 248 DVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 307
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M E GI DV +Y + G + LM V+K P+ T++ + + K
Sbjct: 308 NAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM-VEKGEEPSNVTYNVLLSGLCK 366
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF------- 347
G V A + LR + + D V Y+ L+ GK +E +++N S+F
Sbjct: 367 EGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN---SMFDNENCLE 423
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P V ++ +I L + G + KI + + S + N+++ +K G +A
Sbjct: 424 PNV--FTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 481
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
+ +++ G PNS ++ L +G + R L+ KG F P
Sbjct: 482 ELWKQVLDLGFVPNSFTYSILIDGFCKMRM----LNIAKGLFCEMRTHGLNP 529
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 3/270 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N +A+ A L+ +M G +S+ +M K DE ++
Sbjct: 178 DIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL 237
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MK+KG DV Y +S + G+ ++ + +F+ M + K ++ N T+S + +
Sbjct: 238 EAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM-LGKGISANVVTYSCLVHGLCR 296
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+GQ ++A L + D V Y L+ G+ + NL +N+
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ ++S L + G + KI + D N +M +G D+A FNS+
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416
Query: 415 --EEGGKPNSTSWETLAEGHIRERRILEAL 442
E +PN ++ L G +E R+ +A+
Sbjct: 417 DNENCLEPNVFTFNMLIGGLCKEGRLTKAV 446
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 123/290 (42%), Gaps = 36/290 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ + +A L++ M +KG ++ YNV+++ K + ++
Sbjct: 318 DVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL 377
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM-KVDKAVNPNWTTFSTMATMYI 293
M EKG + DV +YN + +G ++ +F M + + PN TF+ +
Sbjct: 378 RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLC 437
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW------------- 340
K G++ KA + R++ + + + V Y+ LL GK +E +W
Sbjct: 438 KEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 497
Query: 341 ---------------NLYRSVFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEW 378
N+ + +F + G Y+ +++SL + G +E + +F+E
Sbjct: 498 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 557
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ D N M+ +K G+F + ++E G +P++ ++ TL
Sbjct: 558 GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTL 607
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y LL ++A A L ++ D G+ +S Y++++ + K++ + + + EM+
Sbjct: 464 YNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMR 523
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G+ ++ YN ++S +GS E+ + +F+ M + P+ +F+TM +K G
Sbjct: 524 THGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG-NANCEPDIISFNTMIDGTLKAGDF 582
Query: 299 EKAEE-SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT--NLGY 355
+ +E ++ VE + D + + L++ +G+ +E L R V G T L Y
Sbjct: 583 QFVKELQMKMVEMGLR-PDALTFSTLINRLSKLGELDEAKSA--LERMVASGFTPDALVY 639
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
+++ L+ GD + + + + + D +I + +++
Sbjct: 640 DSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTC 680
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYI 293
+M +KG ++ +YN+ L C G K++ EL K +D PN T+S + +
Sbjct: 451 KMVKKGSCGNLVTYNMLLGGCLKAG---KIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 507
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN- 352
KM + A+ E R G + + Y +L S+ K+ + + +L++ + G N
Sbjct: 508 KMRMLNIAKGLF--CEMRTHGLNPALFDYN-TLMASLCKEGSLEQAKSLFQEM--GNANC 562
Query: 353 ----LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ ++ MI + GD + ++++ + + + D + +++ K G D+A++
Sbjct: 563 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 622
Query: 409 FFNSIIEEGGKPNSTSWETLAEG 431
++ G P++ +++L +G
Sbjct: 623 ALERMVASGFTPDALVYDSLLKG 645
>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
Length = 595
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 120/281 (42%), Gaps = 7/281 (2%)
Query: 165 FFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
+FL D+ D+ +Y ++ Y + A L+++M+ G + Y ++ Y
Sbjct: 92 YFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYC 151
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNP 280
E + + EM + I D+ +YNI S G ME VF+L+ D+ + P
Sbjct: 152 LKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLV--ME-VFDLLDRMADQGLEP 208
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
N T+ + + G + +AE VE + V Y ++ Y G + Y ++
Sbjct: 209 NSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLF 268
Query: 341 NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
V + +I+ L R+G+++G + + L D + ++S Y +
Sbjct: 269 VRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQN 328
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
G+ DKA +F+ +++ G + + L G+ + R+ EA
Sbjct: 329 GDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEA 369
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 5/232 (2%)
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
+ YN++M K DE E ++ +G DVY Y+ + S G+ K +E
Sbjct: 1 MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M V + N S + + K+G + + + D+V Y+ + Y G
Sbjct: 61 M-VSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNG 119
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA- 390
E ++ N + + Y +I+ G+++ +++FEE L K++ +P I
Sbjct: 120 NMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEML--KANIEPDIVT 177
Query: 391 -NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N++ S + K G + + + ++G +PNS ++ G R + EA
Sbjct: 178 YNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEA 229
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYN 250
+R N L+ M+D Y V++ K + E + EM +KG+ D Y+Y
Sbjct: 416 LRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYT 475
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
++ SQG K E + + M +DK + P+ TFS
Sbjct: 476 ALINGYCSQGEISKAEDLLQEM-IDKGIEPDELTFS 510
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 1/264 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+YG L++ Y L++ M + G + +N++ T Y K DE + ++M
Sbjct: 345 IYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM 404
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K++G+ DV ++ + + G + F M +++ V PN F+++ + +
Sbjct: 405 KQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQM-MNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
EKA+E + ++ D V ++ +L + G+ + R+ +L V + Y
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I +G I+ K + LSV D N ++ Y + G D A F ++ G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 418 GKPNSTSWETLAEGHIRERRILEA 441
P ++ T+ G RR EA
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEA 607
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 129/287 (44%), Gaps = 7/287 (2%)
Query: 159 VASAEDFFLSLPDTLKDRRV--YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
V A + FL + D V Y +++ +A++ AE + +M DKG + YN
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
++ Y+ I ++ EV M+ EM G++ D Y+Y L+ + G + F+ M + K
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSM-IRK 337
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
+ PN + + Y G + + + L + D ++ + + Y +E
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397
Query: 337 YRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
++N + + P V N G A+I +L ++G ++ F + ++ + + + N ++
Sbjct: 398 MHIFNKMKQQGLSPDVVNFG--ALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++KA+ F+ ++ +G +P+ + T+ + ++++A
Sbjct: 456 YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKA 502
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 121/278 (43%), Gaps = 12/278 (4%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD---KGYAVHSLPYNVMMTLYMKIKE 226
PD + Y LL + + A L+ M D + + + Y ++ + +
Sbjct: 163 PDVVS----YNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQ 218
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
D+ ++ EM ++GI+ +V +Y + ++ EGVF+ M +DK V P+ T++
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQM-IDKGVKPDNDTYN 277
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYR 344
+ Y+ +G+ ++ L + + D Y LL+ + G+ E ++ + +
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRK 337
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+ P V Y +I A G + M + + S D I N++ + Y K+ D
Sbjct: 338 GIKPNVAI--YGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+A FN + ++G P+ ++ L + + R+ +A+
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAV 433
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 103/255 (40%), Gaps = 5/255 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++N + A L +M D+G + + Y ++ K + D E + +M
Sbjct: 206 YATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KG++ D +YN + S G +++ + E M + P+ T+ ++ G+
Sbjct: 266 DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA-HGLKPDCYTYGSLLNYLCNNGRC 324
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+A + + + Y L+ Y + G E++ + NL + ++ +
Sbjct: 325 REARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNII 384
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEE 416
++ A+ I+ IF + + P + N ++ K G D A FN ++ E
Sbjct: 385 FTAYAKKAMIDEAMHIFNKM--KQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNE 442
Query: 417 GGKPNSTSWETLAEG 431
G PN + +L G
Sbjct: 443 GVAPNIFVFNSLVYG 457
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 97/238 (40%), Gaps = 7/238 (2%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ LID M G + Y ++ + + DE + M G++ D ++YN L
Sbjct: 502 AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH 561
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
G + GVF M + + P T+ST+ + +A+E + + +G
Sbjct: 562 GYCRAGRIDDAYGVFREM-LRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMIT--SG 618
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL---GYHAMISSLARIGDIEGM 371
+ + Y + L G + K V + L++S+ L ++ MI +L + G E
Sbjct: 619 KQWNIWIYNIILNG-LSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
+F S D L+ ++EG ++ + F+++ + G PNS L
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735
>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 11/261 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM---KIKEYDEVESMVS 235
+ AL+ AY R NAE + +M+ G +L Y +++ ++ K KE +EV +
Sbjct: 154 HTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKTFVEGNKFKEAEEVFETLL 213
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+ + D +++ + G+ EK VF LM ++ V + T++++ +
Sbjct: 214 NKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALM-AERGVPQSTVTYNSLMSFETNY 272
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
+V K + ++R R D V Y L+ YG ++EE V+ L V P ++
Sbjct: 273 KEVSKIYDQMQRSGLR---PDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRP--SHK 327
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ ++ + A G +E +F+ + + D M+S YV + + AE FF +
Sbjct: 328 AYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFKRL 387
Query: 414 IEEGGKPNSTSWETLAEGHIR 434
++G KPN ++ L +GH +
Sbjct: 388 RQDGLKPNVVTYGALIKGHAK 408
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 95/220 (43%), Gaps = 13/220 (5%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD------ 175
YK ++YD M G R + L+ K +G A E+ L++ + + D
Sbjct: 272 YKEVSKIYDQMQRSGLR------PDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPS 325
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ Y LL+A+ + M A ++ MR Y M++ Y+ + + E+
Sbjct: 326 HKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFK 385
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+++ G++ +V +Y + + EKM ++E M+++ ++ N T +T+ Y K
Sbjct: 386 RLRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLN-SIKANQTILTTIMDAYGKN 444
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
A + +E D+ + LLSL + +++E
Sbjct: 445 KDFGSAVIWYKEMEHHGVPPDQKAQNILLSLAKTQDEQKE 484
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%), Gaps = 7/206 (3%)
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV---NP 280
+K+ ++ S VS ++ + I+ D ++ L + +K + V E+++ ++ +
Sbjct: 55 MKQIEDTGSAVSVLRRERIKKDGLPRDLVLGTLVRFKQLKKWDLVSEILEWLQSQHWWDF 114
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
N F + T Y K+G AE LR + + V + L+ YG G+ ++
Sbjct: 115 NEMDFLMLITAYGKLGDFNGAEMVLRSMNGNGYVPNVVSHTALMEAYGRGGRYNNAEAIF 174
Query: 341 NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSS---YDPRIANLMMSWY 397
++ P + L Y ++ + + E++FE L+ ++S D ++ ++M+
Sbjct: 175 RRMQTSGPEPSALTYQIILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMIYMQ 234
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNST 423
K GN++KA F +++ E G P ST
Sbjct: 235 KKAGNYEKARKVF-ALMAERGVPQST 259
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 156/367 (42%), Gaps = 16/367 (4%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
++KEL + +H V+ W+ N+ + +R + + L A+ + A F + +
Sbjct: 121 LIKELTQRGSIEHCNRVFRWLKNQ-KNYRARNDIYNMMIRLHARHNRTDQARGLFFEMQE 179
Query: 172 --TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D Y A++NA+ RA A ++D M YN ++ + E
Sbjct: 180 WRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 239
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ +M E G+ D+ ++NI LS+ S K FELMK + P+ TT + +
Sbjct: 240 ALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMK-GTHIRPDTTTLNIVI 298
Query: 290 TMYIKMGQVEKAEE---SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
+K+ Q +KA E S+R +S T D V + ++ LY G+ E +N+ +
Sbjct: 299 HCLVKLRQYDKAIEIFNSMREKKSECTP-DVVTFTSIIHLYSVCGQVENCEAAFNMMIAE 357
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFD 404
+ Y+A+I + A G F E ++ + P I + +++ Y +
Sbjct: 358 GLKPNIVSYNALIGAYAARGMDNEAHLFFNEI--KQNGFRPDIVSYTSLLNAYGRSQKPH 415
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNV 464
KA F+ + KPN S+ L + + + +A+ L+ EG + P V++
Sbjct: 416 KARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILR-EMEQEGIQ---PNVVSI 471
Query: 465 INFFKAC 471
AC
Sbjct: 472 CTLLAAC 478
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/323 (19%), Positives = 133/323 (41%), Gaps = 3/323 (0%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF-LSLP 170
V+ L K R+Y A+E+++ M + + L + V + E F + +
Sbjct: 297 VIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIA 356
Query: 171 DTLKDRRV-YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
+ LK V Y AL+ AY M A L ++++ G+ + Y ++ Y + ++ +
Sbjct: 357 EGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHK 416
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
+ MK ++ ++ SYN + + GS G + M+ + + PN + T+
Sbjct: 417 ARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREME-QEGIQPNVVSICTLL 475
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+ + K + L E R + V Y+ + +VG+ ++ ++ R
Sbjct: 476 AACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIK 535
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
++ Y +IS ++ EE + +K + + + Y K+G +AE+
Sbjct: 536 TDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAEST 595
Query: 410 FNSIIEEGGKPNSTSWETLAEGH 432
FN + G P+ ++ + + +
Sbjct: 596 FNLMKSSGCYPDVVTYTAMLDAY 618
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 129/336 (38%), Gaps = 42/336 (12%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL-- 169
++ + +Y AL ++ M +G R + I + + K+ A + F S+
Sbjct: 262 ILSAFKSGAQYSKALSYFELM--KGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMRE 319
Query: 170 --PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
+ D + ++++ Y N E + M +G + + YN ++ Y
Sbjct: 320 KKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMD 379
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
+E +E+K+ G R D+ SY L++ G K +F+ MK +K + PN +++
Sbjct: 380 NEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNK-LKPNLVSYNA 438
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+ Y G + A + LR +E + V LL+ G +K ++ V
Sbjct: 439 LIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRG 498
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
+ + Y+A I S +G+ +DKA
Sbjct: 499 IKLNTVAYNAAIGSCMNVGE-----------------------------------YDKAI 523
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ S+ ++ K +S ++ L G + + EALS
Sbjct: 524 GLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALS 559
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/295 (17%), Positives = 101/295 (34%), Gaps = 71/295 (24%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
LL A R + + ++ +G ++++ YN + M + EYD+ + M++K
Sbjct: 473 TLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKK 532
Query: 241 GIRLDVYSYNIWLSSC-----------------------------------GSQGSTEKM 265
I+ D +Y + +S C QG +
Sbjct: 533 KIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEA 592
Query: 266 EGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
E F LMK P+ T++ M Y EKA +E+ D + L+
Sbjct: 593 ESTFNLMK-SSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMR 651
Query: 326 LYGSVGKKEEVYRVWNLYR--------SVF---------------------------PGV 350
+ G+ V + R ++F P +
Sbjct: 652 SFNKGGQPGRVLSLAESMREKEIPFSDTIFFEMVSACSILQDWRTAVDMIKYIEPSLPVI 711
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
++ + + SL + G IE M K+F + L+ + + ++++ + GN+ K
Sbjct: 712 SSGCLNQFLHSLGKSGKIETMLKLFFKMLASGADVNLNTYSILLKNLLSSGNWRK 766
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 136/333 (40%), Gaps = 4/333 (1%)
Query: 108 ELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFL 167
+L V + R +++ + V +W+ R FR + ++ K + AE ++
Sbjct: 284 DLVNVAVQFRMNKKWDLIIPVCEWILYRSS-FRPDIICYNLLIESYGKKRQLNKAESIYM 342
Query: 168 SL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
+L + Y LL AY A AE +I +MR+ G ++ YN + +K +
Sbjct: 343 ALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKAR 402
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++ + MK + R + ++ + ++ G VF MK PN T+
Sbjct: 403 CTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMK-SIGCKPNICTY 461
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ + + + G EKAEE ++ D Y+ L+ Y G + +++L +
Sbjct: 462 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 521
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ Y+ ++ + R G E E +FEE S + L+++ + + GN +
Sbjct: 522 MGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATR 581
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
E + + G P++ + + + R R+
Sbjct: 582 CEEVMAQLHKSGLTPDTFALNAMLNAYARAGRL 614
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 139/334 (41%), Gaps = 8/334 (2%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD 175
L K R + A+EVY M + ER R + + +++ K S+ F +
Sbjct: 398 LLKARCTEKAVEVYQRM--KRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCK 455
Query: 176 RRV--YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
+ Y AL+NA+ R + AE + ++M+ G+ YN +M Y + +
Sbjct: 456 PNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEI 515
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
S M+ G D SYNI + + G G E E VFE +K + ++P + + +
Sbjct: 516 FSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELK-QRGMSPTMKSHMLLLAAHA 574
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+ G + EE + ++ D + +L+ Y G+ +++ R+ L G ++
Sbjct: 575 RSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERL--LAAMERRGDADV 632
Query: 354 G-YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
G Y+ +++ R G + ME F + + D M Y + + +
Sbjct: 633 GTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEE 692
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+++ G P++ + L ER++ + + ++
Sbjct: 693 MVDAGCYPDAGTARVLLAACSDERQVEQVTAIVR 726
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 5/265 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +LLN Y +A A LL +R G A L YN+++ Y ++ + +E +
Sbjct: 377 DVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLK 436
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM E+G DV +Y I + + S F+ M + K + P+ ++T +
Sbjct: 437 EEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEM-LSKGLQPDCFAYNTRIRAELT 495
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV--YRVWNLYRSVFPGVTN 352
+G + KA + D V Y+ L+ G + ++ ++ + P
Sbjct: 496 LGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDC-- 553
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y +I + G + K F++ +S + + + Y + GN A +F
Sbjct: 554 ITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRK 613
Query: 413 IIEEGGKPNSTSWETLAEGHIRERR 437
++EEG +PN ++ L R R
Sbjct: 614 MLEEGVEPNEITYNVLIHALCRTGR 638
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 144/315 (45%), Gaps = 27/315 (8%)
Query: 144 SDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMR 203
SDAA + D I VH AE L + ++ Y LL+++++ +L+ +M
Sbjct: 213 SDAA-RWDDICAVH----AEMLQLGIEPSIV---TYNTLLDSFLKEGRNDKVAMLLKEME 264
Query: 204 DKGYAV--HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
+G + + +NV++T + + +E MV M+ + ++YN ++ ++G
Sbjct: 265 TRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-KASSFTYNPLITGLLAKGF 323
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG--RDRVP 319
+K + + +L ++ + P T++ M ++ GQVE A+ ++ VE R G D +
Sbjct: 324 VKKADDL-QLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQ--VKFVEMRAMGLQPDVIT 380
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
Y+ LL+ Y G +E ++ R T L Y+ +I R+GD+E ++ EE +
Sbjct: 381 YNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMV 440
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET-----LAEGHI- 433
D ++M + A FF+ ++ +G +P+ ++ T L G I
Sbjct: 441 EQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIA 500
Query: 434 -----RERRILEALS 443
RE +LE +S
Sbjct: 501 KAFRLREVMMLEGIS 515
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 6/244 (2%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+M G A N ++ + +D++ ++ +EM + GI + +YN L S +G
Sbjct: 192 EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251
Query: 261 STEKMEGVFELMKV-DKAVNPNWTTFSTMATMYIKMGQVEKAEESLR--RVESRITGRDR 317
+K+ + + M+ PN T + + T + G +E+A E + R+ + +
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTY 311
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
P L G V K +++ ++ + P V Y+AMI L + G +E + F E
Sbjct: 312 NPLITGLLAKGFVKKADDL-QLEMENEGIMPTVVT--YNAMIHGLLQSGQVEAAQVKFVE 368
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
++ D N +++ Y K G+ +A F + G P ++ L +G+ R
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428
Query: 438 ILEA 441
+ EA
Sbjct: 429 LEEA 432
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 103/262 (39%), Gaps = 7/262 (2%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D Y L+ A A D+M KG YN + + + +
Sbjct: 445 LPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFR 504
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ M +GI D +YNI + G+ + + ++ V + P+ T++ + +
Sbjct: 505 LREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDL-QMKMVHNGLQPDCITYTCLIHAH 563
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-PGV- 350
+ G + +A + + + S V Y + Y G +Y + +R + GV
Sbjct: 564 CERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGN---LYSAYGWFRKMLEEGVE 620
Query: 351 -TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y+ +I +L R G + + F E L + L++ KEGN++ A F
Sbjct: 621 PNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRF 680
Query: 410 FNSIIEEGGKPNSTSWETLAEG 431
+ + + G P+ + + L +G
Sbjct: 681 YFEMHQNGIHPDYLTHKALFKG 702
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 116/245 (47%), Gaps = 3/245 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++N + RA++ NA M+ +G + + +N ++ + K D+ ++ +
Sbjct: 432 YNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLL 491
Query: 239 EKGIRLDVYSY-NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E G++ D++++ +I C + + E +E E+ ++ +NPN ++ + +G
Sbjct: 492 ENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEM--IEWGINPNAVIYNILIRSLCTIGD 549
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
V ++ + LRR++ D Y+ L+ ++ + K E+ ++++ N Y A
Sbjct: 550 VARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSA 609
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
I +L+ G +E +K+F + S D I NL++ V++ ++A+ ++G
Sbjct: 610 FIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKG 669
Query: 418 GKPNS 422
NS
Sbjct: 670 ISLNS 674
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 131/327 (40%), Gaps = 58/327 (17%)
Query: 166 FLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
FL L T R+Y AL++A V++ A L +M YN ++ K+
Sbjct: 172 FLGLSPT---TRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVG 228
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
DE +V +MK+KG +V++Y + + ++ GVFE MK D V PN T
Sbjct: 229 VVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMK-DSGVYPNEATV 287
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS----LY----GSVGKKEEVY 337
+ + KA E L R ++RV H++L+ LY S+ K+ V+
Sbjct: 288 RALVHGVFRCVDPSKALELLSEFLDREQEQERV--HFMLACDTVLYCLANNSMAKEMVVF 345
Query: 338 RVWNLYR-SVFPGVTNLGYHAMISSLARIGDIEGMEKIFE--EWLSVKSSYDPRIA---- 390
L R FPG N ++ +++ L + ++ +FE VK+ +A
Sbjct: 346 LRRVLGRGGYFPG--NSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEV 403
Query: 391 -----------------------------NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
N++++ + + D A F + G PN
Sbjct: 404 LYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPN 463
Query: 422 STSWETLAEGHIRE------RRILEAL 442
++ TL GH ++ R++LE+L
Sbjct: 464 LVTFNTLINGHCKDGAIDKARKLLESL 490
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 111/265 (41%), Gaps = 3/265 (1%)
Query: 178 VYGALLNAYVR-ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
V+ ++ V+ A +R ++ + +R +G Y ++ + K + +E + + +
Sbjct: 361 VFNVVMACLVKGAELRETCDVF-EILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQ 419
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+ G+ +V+SYN+ ++ + F M+V + V PN TF+T+ + K G
Sbjct: 420 LISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQV-RGVVPNLVTFNTLINGHCKDG 478
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++KA + L + D + ++ + + EE + + Y+
Sbjct: 479 AIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYN 538
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I SL IGD+ K+ S D N ++ + + +KA+ F+S+
Sbjct: 539 ILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRS 598
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
G P++ ++ E R+ EA
Sbjct: 599 GLNPDNYTYSAFIEALSESGRLEEA 623
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/122 (16%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L+ +M+ +G + + YN ++ ++ ++ + ++ + + M G+ D Y+Y+ ++ +
Sbjct: 556 LLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALS 615
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G E+ + +F M+ + +P+ + + + ++ VE+A+ + R + +
Sbjct: 616 ESGRLEEAKKMFYSMEAN-GCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISLNS 674
Query: 318 VP 319
+P
Sbjct: 675 IP 676
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
N +++ + K+G DKA S++E G KP+ ++ ++ +G + +R EAL C
Sbjct: 468 NTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECF 522
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 121/269 (44%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL++ Y + A L ++M G + + Y + K E D ++
Sbjct: 327 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 386
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM KG+ L++Y+YN ++ G+ ++ + + M+V +P+ T++T+ Y K
Sbjct: 387 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV-AGFHPDAVTYTTLMDAYCK 445
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV--WNLYRSVFPGVTN 352
++ +A E LR++ R V ++ L++ + G E+ ++ W L + + P T
Sbjct: 446 SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 505
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+++I ++ +I+ + D N+++ + K N +A
Sbjct: 506 --YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 563
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
++ +G +S+ L +G + ++ LEA
Sbjct: 564 MVGKGFNLTVSSYNALIKGFYKRKKFLEA 592
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 111/246 (45%), Gaps = 5/246 (2%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
LI++M+ KG + YN ++ L K + E E ++ EM +GI D Y +
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G+ +F+ M+ + ++P++ T++ + + G+V +A++ + + D
Sbjct: 270 KLGNVSSAYRLFDEMQ-KRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
V Y L+ Y GK +E + + N L + P + Y A+ L + G+++ ++
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT--YTALADGLCKCGEVDTANELL 386
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
E + N +++ K GN D+A + G P++ ++ TL + + +
Sbjct: 387 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 446
Query: 436 RRILEA 441
R ++ A
Sbjct: 447 REMVRA 452
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQ--GSTEKMEG-----VFELMKVDKAVNPNWTTF 285
+ +M G+ + V S N+++S G ++G + E M++ K + PN T+
Sbjct: 168 LFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQI-KGLKPNPYTY 226
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-- 343
+ + + K G+V +AE LR + S D V Y L+ + +G YR+++
Sbjct: 227 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 286
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
R + P + Y A+I L + G + +K+F E + + D ++ Y KEG
Sbjct: 287 RKISPDF--ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+A + N +++ G PN ++ LA+G
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADG 372
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 151/335 (45%), Gaps = 6/335 (1%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGAL 182
AL+V+D M G R + + ++ L+ +A+ + + F + L D+ +
Sbjct: 192 ALQVFDEMRTLGCRLSMRSCNSI--LNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIM 249
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
AY + + +A +++M G V+ + Y+ +M Y ++ + ++ M+ + +G
Sbjct: 250 AKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGF 309
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
++ +Y + + ++ + E+ EGV + ++ +K + + F + Y +MG++E A
Sbjct: 310 SPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAA 369
Query: 303 ESLRR-VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS 361
L V+SR+ V Y+ +++ Y +G+ E + + + V Y++++
Sbjct: 370 RLLNEMVDSRLQVNLFV-YNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDG 428
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
+ G + + + L + N ++ + G+ D A + ++++G PN
Sbjct: 429 YCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPN 488
Query: 422 STSWETLAEGHIRERRILEALSCLKGAFAAEGAKS 456
S TL +G + + +AL+ K A AK+
Sbjct: 489 EISCSTLLDGFFKSGKTEKALNLWKETLARGLAKN 523
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 112/265 (42%), Gaps = 5/265 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D V+GA++N Y + +A L+++M D V+ YN+M+ Y K+ E +++
Sbjct: 348 DEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNIL 407
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM G+R D YSYN + +G K + M + T++ + +
Sbjct: 408 HEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTM-LRNGFAATTLTYNALLKGFCS 466
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW--NLYRSVFPGVTN 352
+G ++ A + + + + LL + GK E+ +W L R + T
Sbjct: 467 LGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTT 526
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
++ +I+ L +I + E++ ++ + D + S Y K G+ D+A N
Sbjct: 527 --FNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNE 584
Query: 413 IIEEGGKPNSTSWETLAEGHIRERR 437
+ G P + +L GH ++
Sbjct: 585 LENLGFAPTIEFFNSLITGHFIAKQ 609
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/386 (19%), Positives = 156/386 (40%), Gaps = 15/386 (3%)
Query: 67 RRPMIKWNAIFRKLSLMDNPQLG-SASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHA 125
R M N+I +L+ LG + +V ++ G K+ + + K K + HA
Sbjct: 205 RLSMRSCNSILNRLA--QTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHA 262
Query: 126 LEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV--YGALL 183
LE + M G L A A ++ +V A SLP + Y L+
Sbjct: 263 LEFVEEMTKMGVEVNLVAYHAV--MNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLV 320
Query: 184 NAYVRARMRGNAELLIDKMR-DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
Y + AE ++ ++R +K V + ++ Y ++ ++ +++EM + +
Sbjct: 321 KGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRL 380
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
+++++ YNI ++ G + + M V P+ +++++ Y K G + KA
Sbjct: 381 QVNLFVYNIMINGYCKLGRMVEAHNILHEM-TGVGVRPDTYSYNSLVDGYCKKGLMNKAF 439
Query: 303 ESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSL 362
E+ + + Y+ LL + S+G ++ R+W L + ++
Sbjct: 440 ETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGF 499
Query: 363 ARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
+ G E +++E L+ + + N +++ K +AE + + + P+
Sbjct: 500 FKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDI 559
Query: 423 TSWETLAEGHI------RERRILEAL 442
++ TL G+ R RIL L
Sbjct: 560 ITYRTLFSGYCKIGDMDRASRILNEL 585
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 116/287 (40%), Gaps = 41/287 (14%)
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
K ++ + +++++ + D + EM+ G RL + S N L+ G
Sbjct: 167 KEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGA 226
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
VFE M+ A+ P+ T + MA Y K+ V A E + + + V YH ++
Sbjct: 227 TVAVFEQMQRAGAL-PDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVM 285
Query: 325 SLYGSVGKKEEVYRVWN------------LYRSVFPGVTN-------------------- 352
+ Y VG+ + R+ + Y + G N
Sbjct: 286 NGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQL 345
Query: 353 ----LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ A+I+ ++G +E ++ E + + + + N+M++ Y K G +A
Sbjct: 346 VVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHN 405
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL----SCLKGAFAA 451
+ + G +P++ S+ +L +G+ ++ + +A + L+ FAA
Sbjct: 406 ILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAA 452
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 156 VHGVASAE--DFFLSLPDTL------KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+HG +++ D L DT+ + Y +L+ ++ A L K+ KG
Sbjct: 767 IHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGI 826
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ +++ YN ++ + K E + M E+GI V++Y+I ++ +QG E+
Sbjct: 827 SPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIK 886
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+ + M ++ V+PN+ T+ T+ Y++ V+
Sbjct: 887 LLDQM-IENNVDPNYVTYWTLIQGYVRCESVD 917
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/211 (17%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
G ID + + + +N+++ K+ ++ +++++++K+KG D ++Y+
Sbjct: 707 GKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSL 766
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+ C + G + + + M + + PN T++++ K G++ +A +++ ++
Sbjct: 767 IHGCSASGFVDVAFDLRDTM-LSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKG 825
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TNLGYHAMISSLARIGDIEG 370
+ + Y+ L+ + G E +++ R + G+ T Y +I+ L G +E
Sbjct: 826 ISPNAITYNTLIDKHCKDGYITEAFKLKQ--RMIEEGIHPTVFTYSILINGLCTQGYMEE 883
Query: 371 MEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
K+ ++ ++++ DP N + W + +G
Sbjct: 884 AIKLLDQM--IENNVDP---NYVTYWTLIQG 909
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/292 (18%), Positives = 121/292 (41%), Gaps = 25/292 (8%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ +L+ + A+ G ++ +M ++G + +++ Y ++ + K + ++ EM
Sbjct: 597 FNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMI 656
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF-----------------ELMKV----DKA 277
EKG+ +++ + +S +G ++ V E+ KV D
Sbjct: 657 EKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTV 716
Query: 278 VNPNWTTFSTMATMYI----KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
N + M + I K+G++E A+ L ++ + D Y L+ + G
Sbjct: 717 AGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFV 776
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+ + + + SV + Y+++I L + G++ +F++ + S + N +
Sbjct: 777 DVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTL 836
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ + K+G +A +IEEG P ++ L G + + EA+ L
Sbjct: 837 IDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLL 888
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 9/270 (3%)
Query: 167 LSLPDTLKDR------RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTL 220
+L D L +R YGAL++ + AE+L+++M+ +G ++ + +N ++
Sbjct: 340 FALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLING 399
Query: 221 YMKIKEYDEVESMVSEMKEKGIRLDVYSYN-IWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
Y K DE M M++KG D+++YN I C E +F + V+K V+
Sbjct: 400 YCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTM--VEKGVD 457
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
PN +F+ M ++ K G + +AE + ++ + + V Y+ L+ Y GK +E YR+
Sbjct: 458 PNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRL 517
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+ S+ Y ++ G +E + E + ++S K
Sbjct: 518 KDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSK 577
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
EG ++A ++ ++ G P+ + +L
Sbjct: 578 EGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 158/363 (43%), Gaps = 52/363 (14%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYG- 180
++ +V+D+M + G ++ + L + + + + FF + + D VY
Sbjct: 161 FEEGFKVFDYMVHNG--LKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSM 218
Query: 181 -ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
+++ + A+ L+ +M KG + + YN ++ Y+KI +++ V M+ M+
Sbjct: 219 TIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEM 278
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM---- 295
+ + +Y + + GS G + E VFE M +++ V + F+++ + K+
Sbjct: 279 DKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKM-LERGVEADIHVFTSIISWQCKLGNMK 337
Query: 296 -------------------------------GQVEKAEESLRRVESRITGRDRVPYHYLL 324
GQ++ AE + ++S+ + V ++ L+
Sbjct: 338 RAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLI 397
Query: 325 SLYGSVGKKEEVYRVWNLYRSVFPGVTN--LGYHAMISSLARIGDIEGMEKIFEEWL--S 380
+ Y G +E R+ ++ G N Y+ + L ++ E ++ WL
Sbjct: 398 NGYCKKGMIDEALRMQDVMEK--KGFENDIFTYNTIAGGLCKLNRHEEAKR----WLFTM 451
Query: 381 VKSSYDPRIAN--LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
V+ DP + +M+ + KEGN +AE F + ++G KPN ++ TL +G+ ++ ++
Sbjct: 452 VEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKL 511
Query: 439 LEA 441
EA
Sbjct: 512 KEA 514
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 15/279 (5%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAI-------QLDLIAKVHGVASAEDFFLSLP 170
K K A ++D +N RG A I QLD + ++ ++L
Sbjct: 332 KLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLV 391
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
++ L+N Y + M A + D M KG+ YN + K+ ++E
Sbjct: 392 -------IFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEA 444
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ + M EKG+ + S+ I + +G+ + E VF+ MK K PN T++T+
Sbjct: 445 KRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMK-KKGEKPNVVTYNTLID 503
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
Y K G++++A +ES D Y L+ GK EE + N +
Sbjct: 504 GYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAI 563
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+ + Y A+IS L++ G E ++++E ++ + D R+
Sbjct: 564 SIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRV 602
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 5/209 (2%)
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+M E + + VYS I + +G E+ + + L K + PN T++T+ YIK+
Sbjct: 205 KMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLM-LEMTGKGIKPNVVTYNTLVNAYIKI 263
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNL 353
E E LR +E + Y L+ YGS GK E +V+ L R V +
Sbjct: 264 MDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIH-- 321
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+ ++IS ++G+++ +F+E + ++ G D AE N +
Sbjct: 322 VFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEM 381
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEAL 442
+G N + TL G+ ++ I EAL
Sbjct: 382 QSQGLDMNLVIFNTLINGYCKKGMIDEAL 410
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 125/258 (48%), Gaps = 17/258 (6%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ L++ + + A+ ++ M K + + YN +M Y +K+ ++ +S+ + M
Sbjct: 271 FSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMA 330
Query: 239 EKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++G+ DV+SY+I ++ C + E M+ +FE M K + PN T++++ K G+
Sbjct: 331 QRGVTPDVWSYSIMINGFCKIKMVDEAMK-LFEEMHC-KQIFPNVVTYNSLVDGLCKSGR 388
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTN 352
A E + + R + + Y+ S+ ++ K V + L + + P +
Sbjct: 389 TSCALELVDEMHDRGQPSNIITYN---SILDAICKNNHVDKAIVLLTKIKEKGIQPDI-- 443
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFF 410
Y +I+ L ++G ++ +K+FE+ L Y P I +++ + +G FD+ A
Sbjct: 444 FTYTVLINGLCKVGRLDDAQKVFEDLLV--KGYSPNIYTYTSLINGFCNKGFFDEGLAML 501
Query: 411 NSIIEEGGKPNSTSWETL 428
+ + + G PN+ ++E L
Sbjct: 502 SKMKDNGCIPNAITYEIL 519
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 5/273 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ YG L+N R A L+ ++ K + + Y+ ++ K K ++ +
Sbjct: 162 DQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLY 221
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM K I DV +Y+ +S G + +F M D +NPN TFS + + K
Sbjct: 222 CEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDN-INPNVYTFSILIDGFCK 280
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
G+V +A+ L + + D V Y+ L+ Y V + + ++N+ R V P V +
Sbjct: 281 EGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWS 340
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y MI+ +I ++ K+FEE + + N ++ K G A +
Sbjct: 341 --YSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDE 398
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ + G N ++ ++ + + + +A+ L
Sbjct: 399 MHDRGQPSNIITYNSILDAICKNNHVDKAIVLL 431
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 100/222 (45%), Gaps = 5/222 (2%)
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
+K K+Y S+ +M+ GI+ D + N+ ++ G + VF + + K +P+
Sbjct: 69 LKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKI-LKKGYHPD 127
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
TF+ + G+V KA +V ++ D+V Y L++ VG+ + ++
Sbjct: 128 AVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLR 187
Query: 342 LY--RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+ V P V + Y +I S+ + + ++ E +S + S D + ++S +
Sbjct: 188 RVDGKLVRPNV--VMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCV 245
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
G A FN +I + PN ++ L +G +E ++ EA
Sbjct: 246 VGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA 287
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L++ ++ A L+D+M D+G + + YN ++ K D+ +++++K
Sbjct: 376 YNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIK 435
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKGI+ D+++Y + ++ G + + VFE + V K +PN T++++ + G
Sbjct: 436 EKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLV-KGYSPNIYTYTSLINGFCNKGFF 494
Query: 299 EKAEESLRRVESRITGRDRVPYHYLL 324
++ L +++ + + Y L+
Sbjct: 495 DEGLAMLSKMKDNGCIPNAITYEILI 520
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 119/271 (43%), Gaps = 6/271 (2%)
Query: 170 PDTLKDRRVYGALLNAYVRARM-RGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
PDT+ Y +L +R + A L+ +++D G + + Y ++ + +
Sbjct: 205 PDTV----TYSTMLTGCIRVKHGYAKAMELLKELQDNGLCMDCVSYGTLIAICASHNRLE 260
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ E ++M+ +G +++ Y L++ G +K + + E MK+ V PN +T+
Sbjct: 261 DAERFFNQMRAEGHSPNMFHYGSLLNAYSINGDYKKADELIEDMKLTGLV-PNKVILTTL 319
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
+Y++ G EK+ + L +ES G + +PY L+ G E V++ ++
Sbjct: 320 LKVYVRGGLFEKSRKLLSELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKNV 379
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ MIS+ R G +E + + +++ + YD I N M+ Y + G +
Sbjct: 380 KTDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQ 439
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
+ + P+ ++ L + +E+ L
Sbjct: 440 MLRKMDDLAISPDYNTFHILIKYFFKEKLYL 470
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ L + ++ + LL YVR + + L+ ++ GY + +PY ++M K
Sbjct: 304 MKLTGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELESLGYGENEMPYCLLMDGLAKAGS 363
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW--TT 284
E +++ EMK K ++ D Y+++I +S+ G E+ + L K +A +
Sbjct: 364 IREAKTVFDEMKAKNVKTDGYAHSIMISAFCRGGLLEEAK---LLAKDFEATYDRYDIVI 420
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
+TM Y + G++E + LR+++ D +H L+ + KE++Y + YR
Sbjct: 421 LNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFF----KEKLYLLC--YR 474
Query: 345 SV 346
++
Sbjct: 475 TL 476
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ ++E I+ ++ N L+ G + +F MK D + P+ T+STM T I+
Sbjct: 161 NNIEEVSIKNSIFICNSILNCLVRNGKFDTSVKLFHQMKND-GLCPDTVTYSTMLTGCIR 219
Query: 295 MGQ-VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+ KA E L+ ++ D V Y L+++ S + E+ R +N R+
Sbjct: 220 VKHGYAKAMELLKELQDNGLCMDCVSYGTLIAICASHNRLEDAERFFNQMRAEGHSPNMF 279
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +++++ + GD + +++ E+ + I ++ YV+ G F+K+ + +
Sbjct: 280 HYGSLLNAYSINGDYKKADELIEDMKLTGLVPNKVILTTLLKVYVRGGLFEKSRKLLSEL 339
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEA 441
G N + L +G + I EA
Sbjct: 340 ESLGYGENEMPYCLLMDGLAKAGSIREA 367
>gi|297851236|ref|XP_002893499.1| hypothetical protein ARALYDRAFT_335936 [Arabidopsis lyrata subsp.
lyrata]
gi|297339341|gb|EFH69758.1| hypothetical protein ARALYDRAFT_335936 [Arabidopsis lyrata subsp.
lyrata]
Length = 198
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 149 QLDLIAKVHGVASAEDFFLSLP-DTLKDRRVYGALLNAYVR-ARMRGNAELLIDKMRDKG 206
+L LI V G+ AE FF ++P D D +Y +L+ Y R A+ AEL+ KMR G
Sbjct: 12 RLHLIDNVLGLEEAEKFFETIPQDKRDDSDLYTTILSFYTRSAKTLEKAELIFHKMRKLG 71
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
Y P+N MM+LY +I + D V ++S+M++ + D + NI L S+
Sbjct: 72 YLSKPCPFNHMMSLYNQIGKRDMVHQILSQMEKNNAKSDNRTLNIILGLLAESHSS---- 127
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
+W MA Y+K G V +A + LRR E + D Y
Sbjct: 128 ------------TLDWRMSCEMAKTYLKQGLVVEAIKMLRRAEESVVDPDSKKY 169
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 36/254 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +Y L++ Y R A + D+M ++G + + YN ++ K K + + +
Sbjct: 140 DNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLF 199
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM E+G D Y++ + G+ K +F M + + P+ ++T+ + K
Sbjct: 200 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM-TQRNIKPDIVAYNTLIDGFCK 258
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+G++EKA E + SR + + Y L++ Y SVG E +R+W++
Sbjct: 259 VGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM----------- 307
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
+EK + L N ++ Y + G+ KA+ F +I
Sbjct: 308 ----------------IEKGIKPTLVT--------CNTVIKGYCRSGDSSKADEFLGRMI 343
Query: 415 EEGGKPNSTSWETL 428
+G P+ S+ TL
Sbjct: 344 AKGVAPDHISYNTL 357
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 115/257 (44%), Gaps = 3/257 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+ AY R + A +++ M DKG YN ++ K Y + ++ EM
Sbjct: 4 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 63
Query: 239 EKGIRLDVYSYNIWL-SSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G+ D +YN L SC +E E E+++ + V P+ +FS++ ++ +
Sbjct: 64 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLR--QGVVPDLVSFSSLMAVFSRNRH 121
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+++A R ++ D V Y L+ Y G E ++ + + + Y+
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+++ L + + +K+F+E + + D ++ + ++GN KA + F ++ +
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241
Query: 418 GKPNSTSWETLAEGHIR 434
KP+ ++ TL +G +
Sbjct: 242 IKPDIVAYNTLIDGFCK 258
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 117/263 (44%), Gaps = 36/263 (13%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D + +L+ + R R A + M+ G ++ Y V+M Y + E
Sbjct: 102 VVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEAL 161
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EM E+G LDV +YN L+ + + +F+ M V++ P++ TF+T+
Sbjct: 162 KIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM-VERGALPDFYTFTTLIHG 220
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
+ + G + KA LSL+G++ + R++ P +
Sbjct: 221 HCQDGNMTKA----------------------LSLFGTMTQ-----------RNIKPDI- 246
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y+ +I ++G++E ++++ +S K + ++++ Y G+ +A ++
Sbjct: 247 -VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 305
Query: 412 SIIEEGGKPNSTSWETLAEGHIR 434
+IE+G KP + T+ +G+ R
Sbjct: 306 VMIEKGIKPTLVTCNTVIKGYCR 328
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGAL 182
AL++ D M +G + A + L+ + K + A+ F + + L D + L
Sbjct: 160 ALKIRDEMLEQGCVLDVIAYNTI--LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 217
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
++ + + A L M + + YN ++ + K+ E ++ + M + I
Sbjct: 218 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 277
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAE 302
+ +Y I +++ S G + ++++M ++K + P T +T+ Y + G KA+
Sbjct: 278 FPNHITYGILINAYCSVGHVSEAFRLWDVM-IEKGIKPTLVTCNTVIKGYCRSGDSSKAD 336
Query: 303 ESLRRVESRITGRDRVPYHYLLS 325
E L R+ ++ D + Y+ L++
Sbjct: 337 EFLGRMIAKGVAPDHISYNTLIN 359
>gi|147778635|emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
Length = 466
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 125/265 (47%), Gaps = 5/265 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ L+N +++ + + + E + + + G + + YN + ++ + D+ ++++M+
Sbjct: 12 FPTLINTHMKNKHQVSVEEV--SISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQME 69
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G L + SY + + GS G T + E +F M V + + ++ M ++ G +
Sbjct: 70 ALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREM-VHLGLKLDLRVYNVMLRSCLRKGLL 128
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYHA 357
E A++ L +++ GR+R Y L+ YG G+ +V+ V + R F G + Y
Sbjct: 129 ELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGF-GPDSFVYSK 187
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I G + +I E + S D RI N ++ + K G +A F + EEG
Sbjct: 188 VIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEG 247
Query: 418 GKPNSTSWETLAEGHIRERRILEAL 442
KP+ +W +L + H + + +AL
Sbjct: 248 VKPDIMTWNSLIQWHCKAGDVGKAL 272
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 148/361 (40%), Gaps = 21/361 (5%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L E G SL+ V++ L R A ++ M + G + L + ++ L
Sbjct: 64 LLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNVMLRSCL 123
Query: 153 IAKVHGVASAEDFFLSLPDTL---KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
G+ D L+ D L ++R Y AL++ Y RA + +I +M G+
Sbjct: 124 ---RKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGP 180
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
S Y+ ++ +Y + + +V E++E G+ LD YN + + G G + VF
Sbjct: 181 DSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVF 240
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
E M+ ++ V P+ T++++ + K G V KA E +++ D + ++S G
Sbjct: 241 EKMQ-EEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGE 299
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVK 382
GK W++ + F + G Y ++ + G +G E+ S
Sbjct: 300 QGK-------WDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEG 352
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ ++ + Y ++G ++ + EG +PN L R LEAL
Sbjct: 353 IQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEAL 412
Query: 443 S 443
S
Sbjct: 413 S 413
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 127/304 (41%), Gaps = 40/304 (13%)
Query: 148 IQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDK 205
+ + L+ + A + F +P+ + +G L+ Y RA L+ +MR
Sbjct: 61 VLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRL 120
Query: 206 GYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKM 265
G++ + + YN +++ + K + D+ E +V EM++ G+ DV ++N +S+ S G +
Sbjct: 121 GFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEA 180
Query: 266 EGVFELMKVDKAVN---PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
+F M++D+ + PN T++ M + K G +E+A +++ +R
Sbjct: 181 SRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNR----- 235
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
E Y +W L L RIG + + + +E + +
Sbjct: 236 ------------ESYNIWLL------------------GLVRIGKLLEAQLVLKEMVDMG 265
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ N++M K G A + G P++ ++ TL G+ ++ EA
Sbjct: 266 MEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEAN 325
Query: 443 SCLK 446
+ L+
Sbjct: 326 NVLR 329
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 118/281 (41%), Gaps = 13/281 (4%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
P+ +Y LL + + L M G + + +NV++ L D
Sbjct: 14 FPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLD 73
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK-MEGVFELMKVDKAVNPNWTTFST 287
+ + +M EKG + YS+ I + G T K +E + E+ ++ +PN ++T
Sbjct: 74 DARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRL--GFSPNKVVYNT 131
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV- 346
+ + + K G+ + AE+ + + D V ++ +S S GK E R+ +R +
Sbjct: 132 LISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRI---FRDMQ 188
Query: 347 ------FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
P + Y+ M+ + G +E +FE+ ++ + N+ + V+
Sbjct: 189 IDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRI 248
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
G +A+ +++ G +PN S+ + +G + + +A
Sbjct: 249 GKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDA 289
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 19/287 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +Y ++++ + +A ++ M KG YN ++ + E+ ++
Sbjct: 467 DSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLI 526
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+E+G+ DV YN LSS G + V + M + K ++PN ++FS + + K
Sbjct: 527 DEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEM-LQKGISPNISSFSILIKAFCK 585
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYL---LSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
+E + + + G Y L + G V K +E++ L RS V
Sbjct: 586 ACDFSAVDE-IFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETA-LDRSF--DVG 641
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
N Y +I L + ++ I + + +DP ++ K GN +A+
Sbjct: 642 NFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAE 701
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWR 458
++ E +EG ++ + A ++G +G W+
Sbjct: 702 KMM-----------EMASEGKVKNKVHQNASCSIQGKKNKDGESEWQ 737
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 114/297 (38%), Gaps = 24/297 (8%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ + + L +R Y L VR A+L++ +M D G + YN++M K
Sbjct: 226 MKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGV 285
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+ ++ M G+ D +Y L G + V M D +PN T +
Sbjct: 286 LFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRD-GCSPNNYTCN 344
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRS 345
+ K G++ +AEE L+++ + D V + ++ + GK ++ + N ++
Sbjct: 345 ILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTH 404
Query: 346 VFPGVTNLG----------------------YHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+ NLG Y +IS L + G + +K F E +
Sbjct: 405 GSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNL 464
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
D I ++ + + KEG A + ++G ++ +L G + +I E
Sbjct: 465 QPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFE 521
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 53/300 (17%), Positives = 122/300 (40%), Gaps = 18/300 (6%)
Query: 128 VYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF---FLSLPD-------TLKDRR 177
V D + N G+ D AI++ HG A+ + ++ L D + D
Sbjct: 381 VIDGLCNNGKL------DKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLI 434
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +++ +A G A+ +M K S Y+V + + K + ++ +M
Sbjct: 435 SYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDM 494
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++KG + +YN + GS+ ++ G+ + M+ ++ V+P+ + ++ + + + G+
Sbjct: 495 EKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMR-ERGVSPDVSIYNNVLSSLCEGGR 553
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
V+ A L + + + + L+ + V ++ + +V G Y
Sbjct: 554 VKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVC-GHKEALYSL 612
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+ L G++ +++FE L + ++ K+ D A + +I++G
Sbjct: 613 TFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKG 672
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 136/333 (40%), Gaps = 4/333 (1%)
Query: 108 ELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFL 167
+L V + R +++ + V +W+ R FR + ++ K + AE ++
Sbjct: 141 DLVNVAVQFRMNKKWDLIIPVCEWILYRSS-FRPDIICYNLLIESYGKKRQLNKAESIYM 199
Query: 168 SL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
+L + Y LL AY A AE +I +MR+ G ++ YN + +K +
Sbjct: 200 ALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKAR 259
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++ + MK + R + ++ + ++ G VF MK PN T+
Sbjct: 260 CTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMK-SIGCKPNICTY 318
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ + + + G EKAEE ++ D Y+ L+ Y G + +++L +
Sbjct: 319 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 378
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ Y+ ++ + R G E E +FEE S + L+++ + + GN +
Sbjct: 379 MGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATR 438
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
E + + G P++ + + + R R+
Sbjct: 439 CEEVMAQLHKSGLTPDTFALNAMLNAYARAGRL 471
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 138/334 (41%), Gaps = 8/334 (2%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD 175
L K R + A+EVY M ER R + + +++ K S+ F +
Sbjct: 255 LLKARCTEKAVEVYQRMKR--ERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCK 312
Query: 176 RRV--YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
+ Y AL+NA+ R + AE + ++M+ G+ YN +M Y + +
Sbjct: 313 PNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEI 372
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
S M+ G D SYNI + + G G E E VFE +K + ++P + + +
Sbjct: 373 FSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELK-QRGMSPTMKSHMLLLAAHA 431
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+ G + EE + ++ D + +L+ Y G+ +++ R++ G ++
Sbjct: 432 RSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMER--RGDADV 489
Query: 354 G-YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
G Y+ +++ R G + ME F + + D M Y + + +
Sbjct: 490 GTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEE 549
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+++ G P++ + L ER++ + + ++
Sbjct: 550 MVDAGCYPDAGTARVLLAACSDERQVEQVTAIVR 583
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 7/292 (2%)
Query: 89 GSASVLNDWE--KGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDA 146
+ +VL+ E KG R L + + E R++ AL+V++ M ++ +R
Sbjct: 96 ATKAVLDKREPGKGTRRLLPRTVLEALHERIAALRWESALKVFELMRDQ-VWYRPYVGIY 154
Query: 147 AIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMR- 203
+ ++ K A + F ++ D + Y AL++AY R+ A L+D+M+
Sbjct: 155 IKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESYTALVSAYSRSGSFDRAFSLLDRMKA 214
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
G Y++++ + ++D+V+ ++++M GIR + +YN + + G G
Sbjct: 215 TPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNTVTYNTLVDAYGKAGRFA 274
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+ME M +K WT ST+ + GQ+E E + ++ + Y+ L
Sbjct: 275 EMESTLLEMLSEKCKPDVWTMNSTLRA-FGSSGQIEMMESCYEKFQASGISPNIKTYNIL 333
Query: 324 LSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
L YG E++ V + + T + Y+ +I + R GD+E ME IF
Sbjct: 334 LDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIF 385
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
+K + G + + YN+++ Y K K Y+++ +++ M++ + +YN+ + + G
Sbjct: 316 EKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRA 375
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVP 319
G E+ME +F LMK D+ + PN T ++ Y + QV+K E LR +E+ T D V
Sbjct: 376 GDLEQMEYIFRLMKSDR-IKPNCVTLCSLIRAYGRADQVKKIETVLRIIENSDTTLDIVF 434
Query: 320 YHYLLSLYGSVGKKEEVYRVWNLYR 344
++ L+ YG VG E++ V N+ +
Sbjct: 435 FNCLVDAYGRVGCLAEMWDVLNMMK 459
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 114/267 (42%), Gaps = 5/267 (1%)
Query: 164 DFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
D + P D + Y L+ + + A + L+ M G +++ YN ++ Y K
Sbjct: 210 DRMKATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNTVTYNTLVDAYGK 269
Query: 224 IKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
+ E+ES + EM + + DV++ N L + GS G E ME +E + ++PN
Sbjct: 270 AGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESCYEKFQA-SGISPNIK 328
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
T++ + Y K EK + ++ V Y+ ++ +G G E++ ++ L
Sbjct: 329 TYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLM 388
Query: 344 RS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+S + P L ++I + R ++ +E + + ++ D N ++ Y + G
Sbjct: 389 KSDRIKPNCVTLC--SLIRAYGRADQVKKIETVLRIIENSDTTLDIVFFNCLVDAYGRVG 446
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ N + E P+ + T+
Sbjct: 447 CLAEMWDVLNMMKLERVSPDKVTCTTM 473
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 5/210 (2%)
Query: 202 MRDKG-YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
MRD+ Y + Y ++T+ K K+ + + M ++G ++ SY +S+ G
Sbjct: 141 MRDQVWYRPYVGIYIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESYTALVSAYSRSG 200
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
S ++ + + MK P+ T+S + + +K ++ L + + V Y
Sbjct: 201 SFDRAFSLLDRMKATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNTVTY 260
Query: 321 HYLLSLYGSVGKKEEVYRVW--NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
+ L+ YG G+ E+ L P V + ++ + + G IE ME +E++
Sbjct: 261 NTLVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTM--NSTLRAFGSSGQIEMMESCYEKF 318
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ S + + N+++ Y K ++K A
Sbjct: 319 QASGISPNIKTYNILLDSYGKAKMYEKMGA 348
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 124/256 (48%), Gaps = 9/256 (3%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
AE L +++R+ G + YN ++ Y++ + E +VSEM++ G++ D +Y++ +
Sbjct: 295 AEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLID 354
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
G E V + M+ V PN FS + Y G+ +K+ + L+ ++S
Sbjct: 355 VYAHAGRWESARIVLKEMEASN-VQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQ 413
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
DR Y+ ++ +G + + L + P + + ++ +I + G + E
Sbjct: 414 PDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDI--VTWNTLIDCHCKSGRHDMAE 471
Query: 373 KIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
++F E + Y P I N+M++ ++ +++ AF + + +G +PNS ++ TL +
Sbjct: 472 ELFSEM--QQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVD 529
Query: 431 GHIRERRILEALSCLK 446
+ + R +A+ CL+
Sbjct: 530 VYGKSGRFSDAIECLE 545
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 111/254 (43%), Gaps = 15/254 (5%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR Y +++ + + +A ++M +G + +N ++ + K +D E +
Sbjct: 415 DRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELF 474
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM+++G + +YNI ++S G Q E++ M+ + + PN T++T+ +Y K
Sbjct: 475 SEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQ-SQGLQPNSITYTTLVDVYGK 533
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+ A E L ++S Y+ L++ Y G E + L +T G
Sbjct: 534 SGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRL-------MTTEG 586
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSV-----KSSYDPRIA--NLMMSWYVKEGNFDKAE 407
+ +L + + G ++ E +V +++ +P + +M ++ F K
Sbjct: 587 LTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVP 646
Query: 408 AFFNSIIEEGGKPN 421
A + ++ G P+
Sbjct: 647 AVYEEMVASGCTPD 660
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 116/272 (42%), Gaps = 1/272 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + Y L++ Y A +A +++ +M +S ++ ++ Y E+ + ++
Sbjct: 345 DEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVL 404
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+MK G++ D + YN+ + + G + FE M + + + P+ T++T+ + K
Sbjct: 405 KDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERM-LSEGIPPDIVTWNTLIDCHCK 463
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+ + AEE ++ R Y+ +++ G + E+V + +S ++
Sbjct: 464 SGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSIT 523
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y ++ + G + E S + N +++ Y + G + A F +
Sbjct: 524 YTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMT 583
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
EG P+ + +L +RR EA + L+
Sbjct: 584 TEGLTPSLLALNSLINAFGEDRRDAEAFAVLQ 615
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFST 287
E E++ E++E G+ +YN L GS + E F + +++KA V P+ T+S
Sbjct: 294 EAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAE--FVVSEMEKAGVKPDEQTYSL 351
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
+ +Y G+ E A L+ +E+ + + +L+ Y G+ ++ ++V +S
Sbjct: 352 LIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSG 411
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
Y+ MI + + ++ FE LS D N ++ + K G D AE
Sbjct: 412 VQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAE 471
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
F+ + + G P T++ + ++R
Sbjct: 472 ELFSEMQQRGYSPCITTYNIMINSMGEQQR 501
>gi|449475395|ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 511
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 119/266 (44%), Gaps = 6/266 (2%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD D Y L+ + ++ A+ L+ M +G +++ YN + Y K K + E
Sbjct: 220 PDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAE 279
Query: 230 VESMVSEM-KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ES++ +M + G + DV++ N L + G G E ME +E + + + P+ TF+ +
Sbjct: 280 MESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQ-EAGIQPSIQTFNIL 338
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--V 346
Y K EK + ++ V Y+ ++ +G G +++ ++ L RS +
Sbjct: 339 LDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERI 398
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
P L +++ + + G E ++ + + D N ++ Y + F +
Sbjct: 399 KPSCVTLC--SLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLECFAEM 456
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGH 432
+ + + G KP+ T++ T+A +
Sbjct: 457 KKVLGMMEQRGCKPDKTTYRTMARAY 482
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 115/241 (47%), Gaps = 11/241 (4%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMR---DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
Y ALL+AY R+ + A ++++M+ D VH+ Y++++ +++ +++ ++++S
Sbjct: 193 YTALLSAYSRSGLLDEAFSILNEMKNSPDCQPDVHT--YSILIKSCLQVFAFNKAQTLLS 250
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN-WTTFSTMATMYIK 294
+M +GI+ + +YN ++ + G +ME + M D P+ WT ST+ + +
Sbjct: 251 DMVTRGIKPNTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRA-FGR 309
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
GQ+E E+ + + ++ LL YG E++ V + T +
Sbjct: 310 SGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVT 369
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNS 412
Y+ +I + R G+++ ME +F L P L ++ Y + G +K ++ N
Sbjct: 370 YNIVIDAFGRAGNLKQMEHLFR--LMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNL 427
Query: 413 I 413
+
Sbjct: 428 V 428
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 109/257 (42%), Gaps = 3/257 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y L+ + + + A L +M ++G V Y +++ Y + DE S+++EM
Sbjct: 157 MYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEM 216
Query: 238 KEK-GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
K + DV++Y+I + SC + K + + M V + + PN T++T Y K
Sbjct: 217 KNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDM-VTRGIKPNTITYNTFIDAYGKAK 275
Query: 297 QVEKAEESLRRVESRITGRDRV-PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+ E L + + + V + L +G G+ E + + + ++ + +
Sbjct: 276 MFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTF 335
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ ++ S + E M + E S+ N+++ + + GN + E F +
Sbjct: 336 NILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRS 395
Query: 416 EGGKPNSTSWETLAEGH 432
E KP+ + +L +
Sbjct: 396 ERIKPSCVTLCSLVRAY 412
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 122/310 (39%), Gaps = 27/310 (8%)
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
ELL +++ + YA + VM+ K K+ ++ + EM E+G + SY LS+
Sbjct: 143 ELLREQLWYRPYAGMYIKLIVMLG---KCKQQEKAYELFQEMIEEGCEVSHESYTALLSA 199
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
G ++ + MK P+ T+S + +++ KA+ L + +R
Sbjct: 200 YSRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKP 259
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVW-NLYR--SVFPGVTNLGYHAMISSLARIGDIEGME 372
+ + Y+ + YG E+ + ++ P V + ++ + + R G +E ME
Sbjct: 260 NTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTM--NSTLRAFGRSGQLETME 317
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF---------------FNSIIEEG 417
K +E++ + N+++ Y K +++K A +N +I+
Sbjct: 318 KCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 377
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
G+ + +R RI + L A G R K +V+N E SD+
Sbjct: 378 GRAGNLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLV----ENSDI 433
Query: 478 GSKEAFVALL 487
F L
Sbjct: 434 MLDTVFYNCL 443
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/468 (20%), Positives = 193/468 (41%), Gaps = 51/468 (10%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDF-----F 166
V++ + + + ALE+ + M G + L I +D K + A F F
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVT--WGILIDAFCKAGKMDEAMGFLKEMKF 240
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
+ L D VY +L+ + + L D++ ++G + ++ YN ++ + K+ +
Sbjct: 241 MGLE---ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
E + M E+G+R +VY+Y + G T++ LM ++K PN T++
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLM-IEKDEEPNAVTYN 356
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--R 344
+ K G V A E + ++ R T D + Y+ LL + G +E ++ L
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
S + + Y+A+I L + + I++ + + D N++++ +K G+ +
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 405 KAEAFFNSIIEEGGKPNSTSWETL------------AEGHIRERRILEA------LSCLK 446
KA + I + NS ++ + A+G + + R+ E +CL
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 447 GAFAAEGA--KSWR-----------PKPVNVINFFKACEEESDMGSKEAFVALLRQPG-- 491
+ EG+ ++WR P V+ + D+ S E+ + + + G
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 492 -----YRKEKDYMSLIGLTDEAVAENNKKNDEDSDEDSEMLLSQLQFA 534
Y K + +G DEA++ +K D + D+ + S L++
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 155/354 (43%), Gaps = 28/354 (7%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRV 178
+ K+A+ V+ + G + S+ +L + ++ H +A + F+ + DT +
Sbjct: 53 QLKNAVSVFQQAVDSGSSLAFAGSNLMAKL-VRSRNHELAFS--FYRKMLETDTFINFVS 109
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
LL YV+ R G A ++ M +G+A + +N+++ + E + S++ EM+
Sbjct: 110 LSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR 169
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTE--KMEGVFELMKVDKAVNPNWT--TFSTMATMYIK 294
+ DV+SYN + +G E ++E EL K +W+ T+ + + K
Sbjct: 170 RNSLMPDVFSYNTVI-----RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCK 224
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G++++A L+ ++ D V Y L+ + G+ + +++ L R P
Sbjct: 225 AGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP--CA 282
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFF 410
+ Y+ +I ++G ++ +IFE ++ P + ++ G +A
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFE--FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPL 340
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNV 464
N +IE+ +PN+ ++ + ++ + +A+ E K R +P N+
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE------IVELMKKRRTRPDNI 388
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 123/272 (45%), Gaps = 1/272 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y +N + G+A ++D M +G+ YN+++ K + +E + ++
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M ++G D+ ++N +++ + E+ + + V K V+P+ TF+ + K
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV-KGVSPDVYTFNILINALCK 403
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+G A +++ D V Y+ L+ S+GK + + S + +
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +I L + IE E++F++ S + N ++ K+ D A N +I
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMI 523
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
EG +PN+ ++ ++ + ++ I +A L+
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 126/289 (43%), Gaps = 9/289 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N + A+ ++++M D+G +N ++ +E +
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++ KG+ DVY++NI +++ G +FE MK + P+ T++T+
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK-NSGCTPDEVTYNTLIDNLCS 438
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN-- 352
+G++ KA + L+ +ES R + Y+ ++ + EE V++ + G++
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD--QMDLQGISRNA 496
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ ++ +I L + I+ + + +S + N +++ Y K+G+ KA +
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKP 461
+ G + + ++ TL G + R AL L+G K RP P
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM----RIKGMRPTP 601
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 116/265 (43%), Gaps = 1/265 (0%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
L+N Y + +A I + G+ + YN + + ++ M ++
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G DV++YNI ++ G E+ +G+ M VD+ P+ TTF+T+ ++E+
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM-VDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A + R+V + D ++ L++ VG R++ ++ + Y+ +I
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
+L +G + + ++ S N ++ K+ ++AE F+ + +G
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494
Query: 421 NSTSWETLAEGHIRERRILEALSCL 445
N+ ++ TL +G ++++I +A +
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFGLI 519
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 132/271 (48%), Gaps = 11/271 (4%)
Query: 178 VYGALLNAYVRARMRGNA-ELLIDKMRDK-GYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
V + L++Y ++ +A +L++++++ G ++ YN ++ + ++ + +ES+ S
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM +GI+ DV ++N + + + E M + V P+ TTF+T+ +++
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS-SRGVAPDETTFTTLMQGFVEE 229
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TNL 353
G +E A R+ +V + L++ Y +G+ E+ + + + + G +
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA--LGYIQQEIADGFEPDQI 287
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFN 411
Y+ ++ L + + K+ + + V+ +DP + N++++ K G ++A+ N
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMD--VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+++ G P+ T++ TL R+ EAL
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 105/258 (40%), Gaps = 2/258 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ G A L+ M G ++ YN ++ K +E E +
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M +GI + ++N + + G+ M + + + PN T++++ T Y K
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQM-ISEGLQPNNITYNSILTHYCK 543
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G ++KA + L + + D V Y L++ G+ + +V R T
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 603
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN-FDKAEAFFNSI 413
Y+ ++ SL R +I +F E V D ++ + G +A F +
Sbjct: 604 YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 663
Query: 414 IEEGGKPNSTSWETLAEG 431
+++G P +S+ LAEG
Sbjct: 664 VDKGFIPEFSSFRMLAEG 681
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 134/327 (40%), Gaps = 9/327 (2%)
Query: 124 HALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGA 181
HAL+V D M G + + I ++ + K + A+ + D L D +
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYN--IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L+ A A L ++ KG + +N+++ K+ + + EMK G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-VDKAVNPNWT-TFSTMATMYIKMGQVE 299
D +YN + + S G K+ +L+K ++ P T T++T+ K ++E
Sbjct: 422 CTPDEVTYNTLIDNLCSLG---KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
+AEE +++ + R+ + ++ L+ K ++ + + N S N+ Y++++
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSIL 538
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ + GDI+ I E + D +++ K G A + +G +
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598
Query: 420 PNSTSWETLAEGHIRERRILEALSCLK 446
P ++ + + R I +ALS +
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFR 625
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 48/122 (39%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG L+N +A A ++ MR KG YN ++ + + S+
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM E G D +Y I G K F L VDK P +++F +A +
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLN 684
Query: 295 MG 296
+G
Sbjct: 685 LG 686
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 7/219 (3%)
Query: 150 LDLIAKVHGVASAEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
LD + K + A + +P + L + Y +++ Y +A +A L ++M+ G
Sbjct: 225 LDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGI 284
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
++ + YN ++++Y K+ ++E + EM+ GIR DV +YN L G Q + +
Sbjct: 285 SLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRK 344
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
VFE MK + V+PN T+ST+ +Y K G +A + R + D V Y L+
Sbjct: 345 VFEEMKA-RHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDAL 403
Query: 328 GSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLAR 364
G E + + + P V Y+++I + R
Sbjct: 404 CKNGLVESAVSLLDEMTKEGIRPNVVT--YNSIIDAFGR 440
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 10/269 (3%)
Query: 184 NAYVRARMRGNAEL-----LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
NA + A +G E + D+M G + +N ++ + K ++ S+ EM
Sbjct: 151 NAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMV 210
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN--PNWTTFSTMATMYIKMG 296
+GI D+++YN L + G +++ FE+M A N PN T+STM Y K G
Sbjct: 211 NRGIDQDIFTYNTLLDAVCKGG---QLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAG 267
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+++ A ++ DRV Y+ LLS+Y +G+ EE V + + Y+
Sbjct: 268 RLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYN 327
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
A++ + + + K+FEE + S + + ++ Y K G + +A F +
Sbjct: 328 ALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKA 387
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCL 445
G K + + L + + + A+S L
Sbjct: 388 GLKADVVLYSALIDALCKNGLVESAVSLL 416
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 116/260 (44%), Gaps = 1/260 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR + +LL + + A L +M ++G YN ++ K + D ++
Sbjct: 182 DRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIM 241
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM K I +V +Y+ + G + +F MK ++ + +++T+ ++Y K
Sbjct: 242 SEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKF-LGISLDRVSYNTLLSIYAK 300
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+G+ E+A + R +E+ +D V Y+ LL YG K + V +V+ ++ L
Sbjct: 301 LGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLT 360
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +I ++ G +F E+ D + + ++ K G + A + + +
Sbjct: 361 YSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 420
Query: 415 EEGGKPNSTSWETLAEGHIR 434
+EG +PN ++ ++ + R
Sbjct: 421 KEGIRPNVVTYNSIIDAFGR 440
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 112/253 (44%), Gaps = 2/253 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEM 237
+ A+++AY R+ A + M+D G + + YN ++ K E+ V + EM
Sbjct: 115 FSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEM 174
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
G++ D ++N L+ C G E + M V++ ++ + T++T+ K GQ
Sbjct: 175 LRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEM-VNRGIDQDIFTYNTLLDAVCKGGQ 233
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
++ A E + + ++ + V Y ++ Y G+ ++ ++N + + + + Y+
Sbjct: 234 LDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNT 293
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
++S A++G E + E + D N ++ Y K+ +D F +
Sbjct: 294 LLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARH 353
Query: 418 GKPNSTSWETLAE 430
PN ++ TL +
Sbjct: 354 VSPNLLTYSTLID 366
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 149/353 (42%), Gaps = 9/353 (2%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
V+++ ++ G T + L K R + A+EVY M ER R + + ++
Sbjct: 228 GVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKK--ERCRTNTZTYXLMIN 285
Query: 152 LIAKVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+ K + S+ F + + Y AL+NA+ R + AE + ++M+ G+
Sbjct: 286 VYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEP 345
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
YN +M Y + + S M+ G D SYNI + + G G ++ E F
Sbjct: 346 DVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAF 405
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+ +K + + P + + + + + G V + EE + ++ D + +L+ YG
Sbjct: 406 QELK-QQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGR 464
Query: 330 VGKKEEVYRVWNLYR---SVFPGVTNLG-YHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
G+ +++ R++ G + Y+ ++++ R G ++ ME F + +
Sbjct: 465 AGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAA 524
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
D + Y ++ + + F +++ G P++ + + L ER++
Sbjct: 525 DVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQV 577
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 149/362 (41%), Gaps = 5/362 (1%)
Query: 80 LSLMDNPQLGSASVLNDWEKGGRSLTKWE-LCRVVKELRKFRRYKHALEVYDWMNNRGER 138
L L+ +ASV +K ++ W+ + V +LR R+++ + V +W+ R
Sbjct: 109 LELVQTRGTDAASVWESLDKIPQAHDLWDDIVNVAVQLRLNRQWEPIITVCEWVLRRSS- 167
Query: 139 FRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGALLNAYVRARMRGNAE 196
FR + +D + ++ AE +++L + + Y LL AY + AE
Sbjct: 168 FRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAE 227
Query: 197 LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
+I +M+ G + YN + +K + ++ + MK++ R + +Y + ++
Sbjct: 228 GVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVY 287
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
G VF MK PN T++ + + + G EKAEE ++ D
Sbjct: 288 GKANQPMSSLRVFREMK-SVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPD 346
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y+ L+ Y G + +++L + Y+ ++ + R G + E F+
Sbjct: 347 VYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQ 406
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
E + L++S + + GN + E + + G +P++ + + + R
Sbjct: 407 ELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAG 466
Query: 437 RI 438
R+
Sbjct: 467 RL 468
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 42/101 (41%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+NAY RA E + +G A + + + Y + KEY + +
Sbjct: 490 DTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVF 549
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
EM + G D + + L++C + E++ + M D
Sbjct: 550 EEMVDAGCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHKD 590
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 1/239 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG++LNA++RA A L ++M++ Y M+ +Y K + E ++++M+
Sbjct: 272 YGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMR 331
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ G R +V +Y+ + G G ++ +F MK + N ++TM MY K G++
Sbjct: 332 QLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMK-QQGCKGNLIVYNTMLDMYGKAGRI 390
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
AE + ++ D V Y L++ Y +G+ EE RV+ +R+ + + M
Sbjct: 391 NDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIM 450
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
I+ + + ++ E D RI ++ Y G + A I E G
Sbjct: 451 INVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRKINELG 509
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 134/317 (42%), Gaps = 5/317 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y A + +R + E+L+D+M K Y +++ + + + S+M
Sbjct: 26 LYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFYALVIKEAINTGRFQTAQHWFSKM 85
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K G D+ YNI + G +G+ + F +K D+ + P+ T+ + + K+G
Sbjct: 86 KLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLK-DEGLLPDSGTYCAVLSACRKVGN 144
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
++K E+L+ + D+V Y L+ ++G G+ E+ + + ++ Y+
Sbjct: 145 IDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNT 204
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I + A++G ++ +F+E DP I M+ Y K D+A + E G
Sbjct: 205 LIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIG 264
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
+PN + ++ +R + + A+ F + R I +
Sbjct: 265 LQPNELGYGSVLNAFMRANQPMGAIKL----FEEMQESNCRFGESTYITMLNVYSKAGFH 320
Query: 478 GSKEAFVALLRQPGYRK 494
+ E +A +RQ G+R+
Sbjct: 321 SAAEELLAKMRQLGFRR 337
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 118/270 (43%), Gaps = 7/270 (2%)
Query: 175 DRRVYGALLNAYVRARMRGN---AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D +Y L+ Y + RGN A +++D+G S Y +++ K+ D+
Sbjct: 93 DIVIYNILILEYGK---RGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGN 149
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EM+E GI+ D +Y+I + G G E F +++ + P+ ++T+
Sbjct: 150 ETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYL-PDSVAYNTLIHA 208
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
+ K+G V++A + + D V ++ ++ +Y ++ V L + +
Sbjct: 209 FAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPN 268
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
LGY +++++ R G K+FEE + M++ Y K G AE
Sbjct: 269 ELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLA 328
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ + G + N ++ TL + + + ++ EA
Sbjct: 329 KMRQLGFRRNVVAYSTLIDMYGKVGKLQEA 358
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 112/258 (43%), Gaps = 1/258 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D ++ ++ Y +ARM A ++ M++ G + L Y ++ +M+ +
Sbjct: 231 LDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIK 290
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM+E R +Y L+ G E + M+ N +ST+ MY
Sbjct: 291 LFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMR-QLGFRRNVVAYSTLIDMY 349
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K+G++++A ++ + + + Y+ +L +YG G+ + R+ +
Sbjct: 350 GKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDT 409
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y +I++ R+G E ++FE+ + D + +M++ Y K + K
Sbjct: 410 VTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEV 469
Query: 413 IIEEGGKPNSTSWETLAE 430
+ + G +P++ +T+ E
Sbjct: 470 MPKSGIQPDTRILKTVVE 487
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 123/303 (40%), Gaps = 5/303 (1%)
Query: 110 CRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKV--HGVASAEDFFL 167
C V+ RK E M G + +I +D+ K H A+A L
Sbjct: 133 CAVLSACRKVGNIDKGNETLKEMREAG--IKPDQVAYSILIDMFGKAGRHEDAAATFREL 190
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
+ L D Y L++A+ + M A L+ + + + + M+ +Y K +
Sbjct: 191 QMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMA 250
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
D+ ++ MKE G++ + Y L++ +FE M+ + +T+ T
Sbjct: 251 DQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQ-ESNCRFGESTYIT 309
Query: 288 MATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF 347
M +Y K G AEE L ++ R+ V Y L+ +YG VGK +E R+++ +
Sbjct: 310 MLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQG 369
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
+ Y+ M+ + G I E++ E K D +++ Y + G F++
Sbjct: 370 CKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECI 429
Query: 408 AFF 410
F
Sbjct: 430 RVF 432
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 121/279 (43%), Gaps = 25/279 (8%)
Query: 48 PVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKW 107
PVI +M Q+++ + + ++K + +++ L N +LG SVLN + + + +
Sbjct: 234 PVIFYTMIQVYAKARMADQALHVLK---LMKEIGLQPN-ELGYGSVLNAFMRANQPMGAI 289
Query: 108 EL--------CRV-----VKELRKFRR---YKHALEVYDWMNNRGERFRLSASDAAIQLD 151
+L CR + L + + + A E+ M G FR + + +D
Sbjct: 290 KLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLG--FRRNVVAYSTLID 347
Query: 152 LIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
+ KV + A F ++ + VY +L+ Y +A +AE L+ +++D
Sbjct: 348 MYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVP 407
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
++ Y ++ Y ++ ++E + + + G++LD I ++ G K+ +
Sbjct: 408 DTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELL 467
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
E+M + P+ T+ +Y G E A E LR++
Sbjct: 468 EVMP-KSGIQPDTRILKTVVEIYEDGGMCENAAELLRKI 505
>gi|255551665|ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543966|gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 130/323 (40%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVY 179
R K A E ++ MN +G ++ A ++ + A ++ + VY
Sbjct: 312 RSAKEAWEFFEKMNRKGVKWSPEILGALVKSFCDEGLKNEALIIQVEMAKKGAFSNAIVY 371
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
L++AY ++ E + +M+ KG S +N++M Y + + + VE ++ EM++
Sbjct: 372 NTLMDAYNKSNQIEEVEGIFAEMKAKGLKPTSATFNILMDAYSRRMQPEIVEELLLEMQD 431
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
G++ D SY +S+ G Q M L + P +++ + Y G E
Sbjct: 432 AGLQPDAKSYTCLISAYGRQNKMTDMAANAFLRMKKVGIKPTSHSYTALIHAYSVSGWHE 491
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
KA + +++ Y LL + G + + R+W + S T + ++ ++
Sbjct: 492 KAYSTFENMQTEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMSEKVEGTRVTFNILL 551
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
A+ G + E+ + N++M+ Y + G K + K
Sbjct: 552 DGFAKQGHYVEARDVISEFGKLGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMATLNLK 611
Query: 420 PNSTSWETLAEGHIRERRILEAL 442
P+S ++ T+ +IR R A
Sbjct: 612 PDSITYLTMIYAYIRVRDFRRAF 634
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 123/266 (46%), Gaps = 7/266 (2%)
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
G+LLN + + A L+D M + G + + YN ++ K ++ + + M++
Sbjct: 689 GSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEK 748
Query: 240 KGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
KGI D +YN +S C S T+ + +++K + ++PN F+ + ++K G +
Sbjct: 749 KGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVK--RKIDPNVIFFTALIDTFVKEGNL 806
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYH 356
+A+ + + R + + Y+ L++ + G+ + +++L + FP V Y+
Sbjct: 807 LEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVT--YN 864
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I+ + +E K+F E D N ++ Y + G + A+ FN +++
Sbjct: 865 TLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 924
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G P+ ++ L + +I +AL
Sbjct: 925 GVPPDIVTYNILLDCLCNNGKIEKAL 950
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 115/256 (44%), Gaps = 6/256 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+G+LL+ + +A L+ M GY + + YN ++ K + + +++EM+
Sbjct: 138 FGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEME 197
Query: 239 EKG-IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+KG + D+ +YN L+ G + + M + +NP+ TF+ + ++K G
Sbjct: 198 KKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDM-TKRRINPDVFTFTALIDAFVKQGN 256
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGY 355
+++A+E +++ G + V Y+ L++ G+ + ++L S FP V Y
Sbjct: 257 LDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVT--Y 314
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +I+ + +E K+F+ D N ++ Y + G A+ F+ ++
Sbjct: 315 NTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVS 374
Query: 416 EGGKPNSTSWETLAEG 431
G P+ + L G
Sbjct: 375 CGVTPDIITHCILLHG 390
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 7/191 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+N + G+A+ + D M KG + YN ++T + K K ++ + EM
Sbjct: 828 YNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 887
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+G+ D ++YN + G + VF M VD V P+ T++ + G++
Sbjct: 888 HQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM-VDCGVPPDIVTYNILLDCLCNNGKI 946
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF-PGVT--NLGY 355
EKA + ++ D + Y+ ++ + + ++V W L+RS+ GV + Y
Sbjct: 947 EKALVMVEDLQKNQMDVDIITYNIIIQ---GMCRNDKVKEAWCLFRSLTRKGVKLDAIAY 1003
Query: 356 HAMISSLARIG 366
MIS L R G
Sbjct: 1004 ITMISGLCRNG 1014
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 134/318 (42%), Gaps = 9/318 (2%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRV 178
R++ A+ + D M G + + I + + K + +A + F + + D
Sbjct: 700 RFQEAVSLVDSMAELGLEPNVVIYNTVI--NGLCKNRDLNNALEIFYGMEKKGIVADAVT 757
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ + +A L+ M + + + + ++ ++K E +++ EM
Sbjct: 758 YNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMI 817
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ + ++ +YN ++ QG + +F+LM V K P+ T++T+ T + K +V
Sbjct: 818 RRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLM-VSKGCFPDVVTYNTLITGFCKSKRV 876
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN--LGYH 356
E + + + D Y+ L+ Y GK +V+N R V GV + Y+
Sbjct: 877 EDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN--RMVDCGVPPDIVTYN 934
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ L G IE + E+ + D N+++ + +A F S+ +
Sbjct: 935 ILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRK 994
Query: 417 GGKPNSTSWETLAEGHIR 434
G K ++ ++ T+ G R
Sbjct: 995 GVKLDAIAYITMISGLCR 1012
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 119/266 (44%), Gaps = 4/266 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKG-YAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
VY L++ + A L+++M KG A + YN ++T E+ + ++ +
Sbjct: 172 VYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRD 231
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M ++ I DV+++ + + QG+ ++ + +++ M + ++ PN T++++ G
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM-LQSSIGPNTVTYNSLINGLCMHG 290
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGY 355
++ A+++ + S+ + V Y+ L++ + + E+ +++ +YR G T Y
Sbjct: 291 RLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT-FTY 349
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +I ++G + + IF +S + D +++ G A FN +
Sbjct: 350 NTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRS 409
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
++ + G + ++ EA
Sbjct: 410 GEKYLGIVAYNIMIHGLCKADKVEEA 435
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 110/270 (40%), Gaps = 47/270 (17%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL-------------------- 253
+ ++T ++ Y+ V +M+ GI D+YS+ I +
Sbjct: 68 FTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMM 127
Query: 254 -----SSCGSQGST-------EKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVE 299
S + GS ++ F L+ V PN ++T+ K G V
Sbjct: 128 KLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVN 187
Query: 300 KAEESLRRVESRITGR---DRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
A E L +E + GR D V Y+ LL+ G+ + R+ R + P V
Sbjct: 188 IALELLNEMEKK--GRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDV--FT 243
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNS 412
+ A+I + + G+++ ++++++ L +SS P N +++ G A+ F+
Sbjct: 244 FTALIDAFVKQGNLDEAQELYKQML--QSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDL 301
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ +G PN ++ TL G + RR+ + +
Sbjct: 302 MASKGCFPNVVTYNTLINGFCKSRRVEDGM 331
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 148/292 (50%), Gaps = 16/292 (5%)
Query: 156 VHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYN 215
+H + S + PD++ + AL+NA+ + +A+ ++ KM++ G + YN
Sbjct: 126 IHSIVSLVEEKQMKPDSI----FFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYN 181
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKG-IRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMK 273
++ Y + DE ++ M +G ++ ++ +YN+ + + C + +E V+++
Sbjct: 182 TLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKM-- 239
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ P+ TF+T+AT Y + G+ +AE + ++ + ++S Y GK
Sbjct: 240 TASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKV 299
Query: 334 EE----VYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+E VYR+ +L + P + L +++++ + D +G++++ + + D
Sbjct: 300 QEALRFVYRMKDL--GMQPNLIVL--NSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVIT 355
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ +M+ + + G +K + +N++++ G KP++ ++ LA+G++R + + +A
Sbjct: 356 YSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKA 407
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 126/303 (41%), Gaps = 16/303 (5%)
Query: 146 AAIQLDLIAKVHGVASAEDFFLSLPDTLK-------DRRVYGALLNAYVRARMRGNAELL 198
+A + + K +G+A D + L D + + + Y L+ A + A +
Sbjct: 176 SACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNV 235
Query: 199 IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGS 258
+ KM G + +N + T Y + + + E+M+ EM+ ++ + + I +S
Sbjct: 236 VYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCR 295
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
+G ++ MK D + PN +++ ++ M + +E L+ +E D +
Sbjct: 296 EGKVQEALRFVYRMK-DLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVI 354
Query: 319 PYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y +++ + G E+ ++N L V P Y + R ++E E++
Sbjct: 355 TYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAH--AYSILAKGYVRAQEMEKAEEMLT 412
Query: 377 EWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+ KS P + ++S + G D A F+ + E G PN ++ETL G+
Sbjct: 413 --VMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAE 470
Query: 435 ERR 437
++
Sbjct: 471 AKQ 473
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 105/233 (45%), Gaps = 14/233 (6%)
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
+M + +K + E + + E G + + +Y L++ +Q + + + L++ +K
Sbjct: 78 VMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVE-EK 136
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
+ P+ F+ + + + G +E A++ +++++ Y+ L+ YG GK +E
Sbjct: 137 QMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDES 196
Query: 337 YRVWNLYRSVFPGVTNL-GYHAMISSLARIGDIEGMEKIFEEWLSV----KSSYDPRIA- 390
++ +L + NL Y+ +I +L + ME I E W V S P +
Sbjct: 197 MKLLDLMSTEGNVKPNLKTYNMLIRALCK------MENISEAWNVVYKMTASGMQPDVVT 250
Query: 391 -NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
N + + Y + G +AEA + KPN + + G+ RE ++ EAL
Sbjct: 251 FNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEAL 303
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y ++NA+ +A + + + M G + Y+++ Y++ +E ++
Sbjct: 351 PDVI----TYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEK 406
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
E M++ M + G+ +V + +S S G + VF+ M + V+PN TF T+
Sbjct: 407 AEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMG-EFGVSPNLKTFETLI 465
Query: 290 TMYIKMGQVEKAEESLRRVE 309
Y + Q KAE L+ +E
Sbjct: 466 WGYAEAKQPWKAEGMLQIME 485
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 123/260 (47%), Gaps = 16/260 (6%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L+N + A L+ D + + G+ + Y ++ K+K ++ + ++S+++E G
Sbjct: 64 LMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENG 123
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
++ D YN +++ G+ ++ +F+ MK D P +TF+T+ Y G K
Sbjct: 124 MKPDSILYNAMINAFSESGNVKEAMKIFQKMK-DTGCKPTTSTFNTLIKGY---GNAGKP 179
Query: 302 EESLR-----RVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTN--L 353
EE L+ ++ + DR Y+ L+ + S K+ + WN L++ V G+ +
Sbjct: 180 EEGLKMLHLMSLDGSVKPNDRT-YNILVRAWCS---KKNIEEAWNVLHKMVASGIQPDVV 235
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y+ + + A+ G+ E + E K + + R ++++ Y KEGN +A F +
Sbjct: 236 TYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRM 295
Query: 414 IEEGGKPNSTSWETLAEGHI 433
E G PN + +L +G +
Sbjct: 296 KELGVHPNLVIFNSLIKGFL 315
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 122/299 (40%), Gaps = 49/299 (16%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L+ A + + + LLI K+ + G S+ YN M+ + + E + +M
Sbjct: 95 TYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKM 154
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
K+ G + ++N + G+ G E+ + LM +D +V PN T++ + +
Sbjct: 155 KDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKN 214
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL-----YRSVFP---- 348
+E+A L ++ + D V Y+ L Y +K E R +L Y V P
Sbjct: 215 IEEAWNVLHKMVASGIQPDVVTYNILARAY---AQKGETLRAEDLILEMQYEKVAPNERT 271
Query: 349 -GVTNLGY----------------------------HAMISSLARIGDIEGMEKIFEEWL 379
G+ GY +++I I D +G+ +E L
Sbjct: 272 CGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGV----DEAL 327
Query: 380 SVKSSY----DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
++ Y D + +M+ + G DK + FN + + G +P+ ++ LA+G++R
Sbjct: 328 TLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVR 386
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 3/181 (1%)
Query: 162 AEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AED L + + R G ++N Y + A + +M++ G + + +N ++
Sbjct: 253 AEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIK 312
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
++ I + D V+ ++ M+E G++ DV +++ +++ S G +K + +F M +
Sbjct: 313 GFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDM-AKAGIE 371
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
P+ FS +A Y++ G+ E AE L + + V ++S + S GK E V
Sbjct: 372 PDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMV 431
Query: 340 W 340
+
Sbjct: 432 Y 432
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + + ++NA+ A + + + + M G ++++ Y++ E +
Sbjct: 337 PDVI----TFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETEN 392
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
ES+++ M + G+R +V +S S G E + V+E M + ++PN TF T+
Sbjct: 393 AESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKM-CEIGISPNLKTFETLI 451
Query: 290 TMYIKMGQVEKAEESLRRVESR 311
Y + Q KAEE L+ +E +
Sbjct: 452 WGYAEARQPGKAEELLQLMEEK 473
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 5/259 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L AY + AE LI +M+ + A + +++ Y K E V
Sbjct: 233 DVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFV 292
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MKE G+ ++ +N + T+ ++ LM+ + V P+ TFST+ +
Sbjct: 293 YRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLME-EYGVKPDVITFSTIMNAWSS 351
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRS-VFPGVTN 352
G ++K +E + D + L Y G+ E V ++ +S V P V
Sbjct: 352 AGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVI 411
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+IS G +E + ++E+ + S + + ++ Y + KAE
Sbjct: 412 C--TTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQL 469
Query: 413 IIEEGGKPNSTSWETLAEG 431
+ E+G P ++ + +A+
Sbjct: 470 MEEKGVFPEKSTIQLVADA 488
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 6/265 (2%)
Query: 178 VYGALLNAY-VRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y L+ + +R R+ G A L+I +M+ KG+ YN +++ EV + E
Sbjct: 262 TYNTLVQGFSLRGRIEG-ARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV---LRE 317
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
MKE G+ D SYNI + C + G E M + V + + P + T++T+
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLE-MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
++E AE +R + + D V Y+ L++ Y G ++ + + + + T Y
Sbjct: 377 KIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++I L R +++FE+ + D + N +M + GN D+A + +
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMM 496
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
P+ ++ L G E + EA
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEA 521
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 117/256 (45%), Gaps = 5/256 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y L++ AE+LI ++R+KG + S+ YN+++ Y + + + ++ EM
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
GI+ ++Y + + T + + +FE + V K + P+ +T+ + +G
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV-VGKGMKPDLVMMNTLMDGHCAIGN 482
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+++A L+ ++ D V Y+ L+ GK EE + + ++ Y+
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIE 415
+IS ++ GD + + +E LS+ ++P + N ++ K + AE +
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSL--GFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 416 EGGKPNSTSWETLAEG 431
EG PN +S+ ++ E
Sbjct: 601 EGIVPNDSSFCSVIEA 616
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 123/300 (41%), Gaps = 33/300 (11%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
K ++ L+ + RM A M++KG+ + N ++TL ++ +
Sbjct: 153 KSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVF 212
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
++M I+ +VY++NI ++ +G +K +G +M+V + P T++T+ +
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV-FGIKPTIVTYNTLVQGFS 271
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN---------LYR 344
G++E A + ++S+ D Y+ +LS + G+ EV R Y
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYN 331
Query: 345 SVFPGVTNLG-----------------------YHAMISSLARIGDIEGMEKIFEEWLSV 381
+ G +N G Y+ +I L IE E + E
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
D N++++ Y + G+ KA A + ++ +G +P ++ +L R+ + EA
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 3/233 (1%)
Query: 200 DKMRDKGYAVHSLPYNVMM-TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGS 258
D+M +G YN ++ L+M+ K + E ++ E++EKGI LD +YNI ++
Sbjct: 351 DEMVKQGMVPTFYTYNTLIHGLFMENK-IEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
G +K + + M D + P T++++ + + + +A+E +V + D V
Sbjct: 410 HGDAKKAFALHDEMMTD-GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLV 468
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
+ L+ + ++G + + + + ++ Y+ ++ L G E ++ E
Sbjct: 469 MMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM 528
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
D N ++S Y K+G+ A + ++ G P ++ L +G
Sbjct: 529 KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKG 581
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 5/208 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N Y + A L D+M G Y ++ + + + E + +
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-VD-KAVNPNWTTFSTMATMY 292
++ KG++ D+ N + + G+ M+ F L+K +D ++NP+ T++ +
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGN---MDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
G+ E+A E + ++ R D + Y+ L+S Y G + + V + S+ T
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLS 380
L Y+A++ L++ + E E++ E S
Sbjct: 573 LTYNALLKGLSKNQEGELAEELLREMKS 600
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 139/320 (43%), Gaps = 19/320 (5%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L++ + + A +++ M KG +++++ YN ++ K + + M EM
Sbjct: 410 YTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMS 469
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
KG + D+Y++N + E+ G++ M ++ + N T++T+ ++++ +
Sbjct: 470 SKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVI-ANTVTYNTLIHAFLRLELI 528
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
++A++ + + R D + Y+ L+ G E+ + +FP + + +
Sbjct: 529 QQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSC--N 586
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I+S R G + + + + + D N +++ K G F +A FN + +
Sbjct: 587 ILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK 646
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCL-KGAFAAEGAKSWRPKPVN---VINFFKACE 472
G P++ ++ TL + E +A L KG + + P + +IN+F
Sbjct: 647 GIHPDAVTYNTLISRYCYEGLFNDACQLLFKGV-----SNGFIPNEITWSILINYFVKNN 701
Query: 473 EESDMGSKEAFVALLRQPGY 492
+S E F L+ G+
Sbjct: 702 SDS-----EQFTILMGNWGF 716
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 127/315 (40%), Gaps = 11/315 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + + +++ +A A L D+M + + +L +M ++ + DE +M+
Sbjct: 269 DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAML 328
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S++ L YN ++ G E+ + + V P+ TF+ M K
Sbjct: 329 SKIPNPNTVL----YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G + A E L + + + + Y L+ + G EE +V N + + +G
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +I +L + G I+ +++ E S D N ++ K ++A + ++
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEE 474
EG N+ ++ TL +R L ++ A G +R P++ I + +
Sbjct: 505 LEGVIANTVTYNTLIHAFLR-------LELIQQADKLVGEMRFRGCPLDNITYNGLIKAL 557
Query: 475 SDMGSKEAFVALLRQ 489
G+ E + L+ Q
Sbjct: 558 CKTGATEKCLGLIEQ 572
>gi|326507498|dbj|BAK03142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1043
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 158/366 (43%), Gaps = 29/366 (7%)
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
SL+D P GG S+ C+++ RKF R A V +++ +
Sbjct: 604 SLLDTP-------------GGSSIA----CQLI---RKFAREGSAC-VAKFLHEQLTELG 642
Query: 141 LSASDAAIQLDLI--AKVHGVASAEDFFLSLPDTL-KDRRVYGALLNAYVRARMRGNAEL 197
+ D+A ++ + + AE+ F S + K VY A+++A + A
Sbjct: 643 VKPEDSATATLIVQYGQEQKLDQAEELFESASTSFPKGGPVYNAMVDALCKCGKIEEAYH 702
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L KM D+G++ + ++++T K ++ E E+++ + LD YN ++ S
Sbjct: 703 LFMKMADQGHSRDVVTISILVTHLTKHGKFQEAENIIHGCFNGEVELDTVVYNTFIKSML 762
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G +++ M + V + TF+ M ++Y G++EKA E + D
Sbjct: 763 ESGKLYSAASIYDRM-IFSGVPRSLQTFNIMISVYGLGGKLEKATEMFTAAQELGLPIDE 821
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
Y +L+ YG G+ ++ ++N + + PG + +++MI++ A G + E +F
Sbjct: 822 KLYTNMLNFYGKAGRHQDASLLFNRMKEQGIMPG--KISFNSMINAYATSGLHDDAEIVF 879
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+E S D ++ Y + + KAE +++ G P+ + L + E
Sbjct: 880 QEMHSHGQVPDSMTYLALIRAYSESRCYSKAEETIQNMLGSGITPSCPHFSHLIFAFLTE 939
Query: 436 RRILEA 441
+I EA
Sbjct: 940 GQIDEA 945
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 130/336 (38%), Gaps = 46/336 (13%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS-- 161
LT E+C V++E R +R+ A + + WM + +L + + ++ + +G A
Sbjct: 138 LTFREMCVVLREQRGWRQ---AHDFFSWM-----KLQLCYEPSVVAYTILLRAYGNAGKI 189
Query: 162 --AEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
AE+ FL + + D G LL AY R G+ L +G +N M
Sbjct: 190 ELAEEAFLEMLEAGVEPDAVACGTLLCAYARRGRHGDMMLFYKATCRRGVVPPMSAFNFM 249
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
++ K + + +V + M E M+
Sbjct: 250 LSSLQKHRLHGKVIHLWKHMME--------------------------------MEEANN 277
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
V PN T++ + ++K G +E++ + L ++ + Y L+SL G+ E
Sbjct: 278 VVPNHFTYTVVIGSFVKEGLLEESMQVLGKMRMSRLVPEEATYSSLISLSARHGRGEHAV 337
Query: 338 RVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
++ R+ +N ++++ + D +F E + D I +++ Y
Sbjct: 338 MLYEEMRAHGIVPSNYTCASLLALYDKSEDYSKALSLFSEMERSRVVIDEVIYGILIRIY 397
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHI 433
K G +D A+ F I G + ++ +A+ H+
Sbjct: 398 GKIGLYDDAQRTFEEIDNAGLLSDEQTYVAMAQVHM 433
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 6/170 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +L++ R +A +L ++MR G + ++ LY K ++Y + S+ SEM
Sbjct: 319 TYSSLISLSARHGRGEHAVMLYEEMRAHGIVPSNYTCASLLALYDKSEDYSKALSLFSEM 378
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA-VNPNWTTFSTMATMYIKMG 296
+ + +D Y I + G G + + FE ++D A + + T+ MA +++ G
Sbjct: 379 ERSRVVIDEVIYGILIRIYGKIGLYDDAQRTFE--EIDNAGLLSDEQTYVAMAQVHMNAG 436
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLY 343
++A + + SR Y LL + + EE +R Y
Sbjct: 437 NYDRALLVMGSMRSRNVTPSLFSYSSLLRCHVVMEDIAAAEEAFRALCKY 486
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D Y AL+ AY +R AE I M G ++ ++ ++ + DE +
Sbjct: 888 VPDSMTYLALIRAYSESRCYSKAEETIQNMLGSGITPSCPHFSHLIFAFLTEGQIDEAQR 947
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ S+M+E G+ +D+ + + G E+ +FE + ++ P+ S +Y
Sbjct: 948 ICSQMQEIGVAVDLACCRAMMRAYLEHGRVEEGISLFETTR--GSLKPDSFILSAAFHLY 1005
Query: 293 IKMGQVEKAEESL 305
G+ +A + L
Sbjct: 1006 EHSGREPEAGDVL 1018
>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
Length = 526
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 119/281 (42%), Gaps = 7/281 (2%)
Query: 165 FFLSLPDT--LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
+FL D+ D+ +Y ++ Y + A L+++M+ G + Y ++ Y
Sbjct: 92 YFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYC 151
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNP 280
E + + EM + I D+ +YNI S G ME VF+L+ D + P
Sbjct: 152 LKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLV--ME-VFDLLDRMADHGLEP 208
Query: 281 NWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW 340
N T+ + + G + +AE VE + V Y ++ Y G + Y ++
Sbjct: 209 NSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLF 268
Query: 341 NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
V + +I+ L R+G+++G + + L D + ++S Y +
Sbjct: 269 VRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQN 328
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
G+ DKA +F+ +++ G + + L G+ + R+ EA
Sbjct: 329 GDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEA 369
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 5/232 (2%)
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
+ YN++M K DE E ++ +G DVY Y+ + S G+ K +E
Sbjct: 1 MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M V + N S + + K+G + + + D+V Y+ + Y G
Sbjct: 61 M-VSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNG 119
Query: 332 KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA- 390
E ++ N + + Y +I+ G+++ +++FEE L K++ +P I
Sbjct: 120 NMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEML--KANIEPDIVT 177
Query: 391 -NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
N++ S + K G + + + + G +PNS ++ G R + EA
Sbjct: 178 YNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEA 229
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/277 (16%), Positives = 114/277 (41%), Gaps = 17/277 (6%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y +++ Y+ + +A +L ++ +G V + ++ ++ ++ M
Sbjct: 247 MYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIM 306
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E + DV SY+ +S G +K F M V + ++ + ++ + Y K G+
Sbjct: 307 LEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDM-VQRGLSIDVIVYTILMNGYCKAGR 365
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLY---------GSVGKKEEVYRVWNLYRSVFP 348
+++A + ++ + D + Y LL + + K+ + + + +
Sbjct: 366 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 425
Query: 349 GVTNL-------GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ ++ Y +I + + ++F+E L + D +++ Y +G
Sbjct: 426 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 485
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
KAE +I++G +P+ ++ L + +R R+I
Sbjct: 486 EISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKI 522
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 167/385 (43%), Gaps = 33/385 (8%)
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
SL P GS + D + LT + + +E + AL ++ +M R + +
Sbjct: 23 SLSQLPPRGSVTRCMDLYRS--KLTMQDFSLIFREFAARSDWHRALRLFKYMQ-RQQWCK 79
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYG--ALLNAYVRARMRGNAELL 198
+ I + ++ + + + F +P+ VY AL+NAY R + L
Sbjct: 80 PTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHL 139
Query: 199 IDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
+ +M+ + + + YN ++ K +++ + ++ ++M+ +GI+ D+ +YN LS+C
Sbjct: 140 LARMKKERVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACS 199
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
S+G E+ VF+ M + V + T+ ++ + Q+ + EE LR +E D
Sbjct: 200 SRGLVEQAAMVFKTMN-ESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDI 258
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y+ L+ Y G V+ +++ + G G + + + + I G + FE+
Sbjct: 259 AGYNSLIEAYADAGN---VHGAAGVFKQMQRG----GCAPDVETYSTLLRIYGNQGCFEQ 311
Query: 378 WLSVKS-----SYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
S+ S S P +A N ++ + + G F ++ F+ +++ G KP+ ++ L
Sbjct: 312 VRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLS 371
Query: 431 GHIRERRILEALSCLKGAFAAEGAK 455
C +G E AK
Sbjct: 372 ------------VCGRGGLTREAAK 384
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 126/298 (42%), Gaps = 18/298 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y LL+A + A ++ M + G ++ Y ++ + + VE ++
Sbjct: 187 DLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELL 246
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+++G D+ YN + + G+ GVF+ M+ P+ T+ST+ +Y
Sbjct: 247 REMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQ-RGGCAPDVETYSTLLRIYGN 305
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TN 352
G E+ ++ T Y+ L+ ++G G +E ++ + V GV +
Sbjct: 306 QGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLF--HDMVDSGVKPDD 363
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y A++S R G KI + L+ +S+ + ++S Y K + A +
Sbjct: 364 ATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYR 423
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCL----KGAFAAEGAKSWRPKPVNVIN 466
I E G P ++++ L +G+ + +EA S L K F A PV+ +N
Sbjct: 424 IREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQA---------PVSSVN 472
>gi|255562320|ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538605|gb|EEF40208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 342
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 126/291 (43%), Gaps = 8/291 (2%)
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
M+D + V + N ++ LY ++ + ++ ++ M+++ I+ +++Y + + + G
Sbjct: 1 MKDLEFPVTTFACNQLLLLYKRL-DKKKIADVLLLMEKENIKPSLFTYKLLIDTKGQSND 59
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
M+ + E MK D + P+ + +A Y G EKAE L+ +E R
Sbjct: 60 LTGMDQIVETMKAD-GIEPDINIRAILAKHYASGGLKEKAEAILKEMEGGNLEEHRWACR 118
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
LL LY ++GK +EV RVW + S P + A+I + ++ I+ E++F L+
Sbjct: 119 LLLPLYAALGKADEVERVWKVCESS-PQLEECV--AVIEAWGKLKKIDKAEEVFNRMLTT 175
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
R + ++ Y + + + G + +W++L + ++ + +A
Sbjct: 176 WKKLSSRHYSALLKVYASHKMLANGKDLIKKMADSGCRIGPLTWDSLVKLYVEAGEVEKA 235
Query: 442 LSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGY 492
S L A K P + I + D+ + E +RQ GY
Sbjct: 236 DSVLHKAAQQNHMK---PMFSSYIVIMDQYAKRGDVHNAEKMFHRMRQAGY 283
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 154 AKVHGVASAEDFFLSLPDTLK--DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
K+ + AE+ F + T K R Y ALL Y +M N + LI KM D G +
Sbjct: 157 GKLKKIDKAEEVFNRMLTTWKKLSSRHYSALLKVYASHKMLANGKDLIKKMADSGCRIGP 216
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY-SYNIWLSSCGSQGSTEKMEGVFE 270
L ++ ++ LY++ E ++ +S++ + ++ ++ SY + + +G E +F
Sbjct: 217 LTWDSLVKLYVEAGEVEKADSVLHKAAQQNHMKPMFSSYIVIMDQYAKRGDVHNAEKMFH 276
Query: 271 LMK 273
M+
Sbjct: 277 RMR 279
>gi|255661198|gb|ACU25768.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 426
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 129/283 (45%), Gaps = 5/283 (1%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D VY +++N + +A++ A LI +MR G ++ Y ++T+Y++ K++ E S
Sbjct: 76 MPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVENKKFLEALS 135
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ +EM+E LD+ + NI + G G ++ + +F M+ + PN +++T+ +Y
Sbjct: 136 VFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMR-KLGIEPNVVSYNTLLRVY 194
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
+A R ++ + ++ V Y+ ++ +YG + E+ + +S
Sbjct: 195 GDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNA 254
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y +IS ++G ++ +FE+ S D + M+ Y + G A+ +
Sbjct: 255 ITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHE 314
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK 455
+ P T+ LA R RI EA + A A K
Sbjct: 315 LKTPDNIPRDTAIHILA----RAGRIEEATWVFRQAIDAGEVK 353
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 137/306 (44%), Gaps = 21/306 (6%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PDTL 173
+++ AL V+ M R + L + I +D+ ++ A+ F S+ P+ +
Sbjct: 128 KKFLEALSVFAEM--REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVV 185
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
Y LL Y A + G A L M+ K + + YN MM +Y K E+++ ++
Sbjct: 186 S----YNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
+ EM+ +GI + +Y+ +S G G ++ +FE ++ + + + TM Y
Sbjct: 242 IQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLR-SSGIEIDQVLYQTMIVAYE 300
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-VTN 352
+ G V A+ L +++ D +P + + G+ EE W +++ G V +
Sbjct: 301 RAGLVSHAKRLLHELKTP----DNIPRDTAIHILARAGRIEEA--TWVFRQAIDAGEVKD 354
Query: 353 LG-YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ + MI ++ + ++F++ ++ D + L+++ Y K F+KA +
Sbjct: 355 ITVFERMIDLFSKYKKYSNIVEVFDKMRGLEYFSDSYVIALVLNAYGKLHEFEKANDVYT 414
Query: 412 SIIEEG 417
+ +EG
Sbjct: 415 EMQDEG 420
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 88/226 (38%), Gaps = 36/226 (15%)
Query: 203 RDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGST 262
RD+ + Y+ ++T + K +D+ S + +M++ +R D+ Y+ +
Sbjct: 1 RDRALSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDY 60
Query: 263 EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHY 322
K +F +K + P+ +++M ++ K +A + + + D V Y
Sbjct: 61 SKAISIFSRLK-RSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTA 119
Query: 323 LLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK 382
LL++Y V N + +S +F E +K
Sbjct: 120 LLTMY----------------------VENKKFLEALS-------------VFAEMREIK 144
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
D N+M+ Y + G +A+ F S+ + G +PN S+ TL
Sbjct: 145 CLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSYNTL 190
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 3/266 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+N +A+ A L+ +M G +S+ +M K DE ++ MK
Sbjct: 36 YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 95
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KG DV Y +S + G+ ++ + +F+ M + K ++ N T+S + ++GQ
Sbjct: 96 KKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM-LGKGISANVVTYSCLVHGLCRLGQW 154
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
++A L + D V Y L+ G+ + NL +N+ Y+ +
Sbjct: 155 KEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVL 214
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII--EE 416
+S L + G + KI + D N +M +G D+A FNS+ E
Sbjct: 215 LSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNEN 274
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
+PN ++ L G +E R+ +A+
Sbjct: 275 CLEPNVFTFNMLIGGLCKEGRLTKAV 300
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 126/292 (43%), Gaps = 17/292 (5%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +YG L++ + + L D+M KG + + + Y+ ++ ++ ++ E +++
Sbjct: 102 DVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 161
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M E GI DV +Y + G + LM V+K P+ T++ + + K
Sbjct: 162 NAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM-VEKGEEPSNVTYNVLLSGLCK 220
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVF------- 347
G V A + LR + + D V Y+ L+ GK +E +++N S+F
Sbjct: 221 EGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN---SMFDNENCLE 277
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P V ++ +I L + G + KI + + S + N+++ +K G +A
Sbjct: 278 PNV--FTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 335
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
+ +++ G PNS ++ L +G + R L+ KG F P
Sbjct: 336 ELWKQVLDLGFVPNSFTYSILIDGFCKMRM----LNIAKGLFCEMRTHGLNP 383
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 123/290 (42%), Gaps = 36/290 (12%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ + +A L++ M +KG ++ YNV+++ K + ++
Sbjct: 172 DVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL 231
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM-KVDKAVNPNWTTFSTMATMYI 293
M EKG + DV +YN + +G ++ +F M + + PN TF+ +
Sbjct: 232 RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLC 291
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW------------- 340
K G++ KA + R++ + + + V Y+ LL GK +E +W
Sbjct: 292 KEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 351
Query: 341 ---------------NLYRSVFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEW 378
N+ + +F + G Y+ +++SL + G +E + +F+E
Sbjct: 352 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 411
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ D N M+ +K G+F + ++E G +P++ ++ TL
Sbjct: 412 GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTL 461
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 105/222 (47%), Gaps = 7/222 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL ++A A L ++ D G+ +S Y++++ + K++ + + + EM
Sbjct: 317 TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM 376
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G+ ++ YN ++S +GS E+ + +F+ M + P+ +F+TM +K G
Sbjct: 377 RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG-NANCEPDIISFNTMIDGTLKAGD 435
Query: 298 VEKAEE-SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT--NLG 354
+ +E ++ VE + D + + L++ +G+ +E L R V G T L
Sbjct: 436 FQFVKELQMKMVEMGLR-PDALTFSTLINRLSKLGELDEAKSA--LERMVASGFTPDALV 492
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
Y +++ L+ GD + + + + + D +I + +++
Sbjct: 493 YDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTC 534
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYI 293
+M +KG ++ +YN+ L C G K++ EL K +D PN T+S + +
Sbjct: 305 KMVKKGSCGNLVTYNMLLGGCLKAG---KIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN- 352
KM + A+ E R G + + Y +L S+ K+ + + +L++ + G N
Sbjct: 362 KMRMLNIAKGLF--CEMRTHGLNPALFDYN-TLMASLCKEGSLEQAKSLFQEM--GNANC 416
Query: 353 ----LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
+ ++ MI + GD + ++++ + + + D + +++ K G D+A++
Sbjct: 417 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 476
Query: 409 FFNSIIEEGGKPNSTSWETLAEG 431
++ G P++ +++L +G
Sbjct: 477 ALERMVASGFTPDALVYDSLLKG 499
>gi|356512321|ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 733
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 15/247 (6%)
Query: 200 DKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQ 259
+ M+ +G + YN ++ Y + K+ DE E + EMK + I +V S+ L +
Sbjct: 251 EDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIVPNVISFTTMLKGYVAA 310
Query: 260 GSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESL-RRVESRITGRDRV 318
G + VFE MK V PN TFST+ ++ +A + L VE I +D
Sbjct: 311 GRIDDALKVFEEMK-GCGVKPNVVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNA 369
Query: 319 PYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLG-YHAMISSLARIGDIEGMEKIFE 376
+ ++S G + V + R P T G Y +I S + + EK+ +
Sbjct: 370 LFMKMMSCQCKAGDLDAAADVLKAMVRLSIP--TEAGHYGVLIESFCKANVYDKAEKLLD 427
Query: 377 EWLSVK--------SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ + + S +P NLM+ + + G KAE FF ++++G + +S ++ L
Sbjct: 428 KLIEKEIVLRPQNDSEMEPSAYNLMIGYLCEHGRTGKAETFFRQLLKKGVQ-DSVAFNNL 486
Query: 429 AEGHIRE 435
GH +E
Sbjct: 487 IRGHSKE 493
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 167/385 (43%), Gaps = 33/385 (8%)
Query: 81 SLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFR 140
SL P GS + D + LT + + +E + AL ++ +M R + +
Sbjct: 23 SLSQLPPRGSVTRCMDLYRS--KLTMQDFSLIFREFAARSDWHRALRLFKYMQ-RQQWCK 79
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYG--ALLNAYVRARMRGNAELL 198
+ I + ++ + + + F +P+ VY AL+NAY R + L
Sbjct: 80 PTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHL 139
Query: 199 IDKMRDKGYAVHSLPYNVMMTLYMKIK-EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
+ +M+ + + + YN ++ K +++ + ++ ++M+ +GI+ D+ +YN LS+C
Sbjct: 140 LARMKKEQVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACS 199
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
S+G E+ VF+ M + V + T+ ++ + Q+ + EE LR +E D
Sbjct: 200 SRGLVEQAAMVFKTMN-ESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDI 258
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
Y+ L+ Y G V+ +++ + G G + + + + I G + FE+
Sbjct: 259 AGYNSLIEAYADAGN---VHGAAGVFKQMQRG----GCAPDVETYSTLLRIYGNQGCFEQ 311
Query: 378 WLSVKS-----SYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAE 430
S+ S S P +A N ++ + + G F ++ F+ +++ G KP+ ++ L
Sbjct: 312 VRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLS 371
Query: 431 GHIRERRILEALSCLKGAFAAEGAK 455
C +G E AK
Sbjct: 372 ------------VCGRGGLTREAAK 384
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 126/298 (42%), Gaps = 18/298 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y LL+A + A ++ M + G ++ Y ++ + + VE ++
Sbjct: 187 DLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELL 246
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+++G D+ YN + + G+ GVF+ M+ P+ T+ST+ +Y
Sbjct: 247 REMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQ-RGGCAPDVETYSTLLRIYGN 305
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TN 352
G E+ ++ T Y+ L+ ++G G +E ++ + V GV +
Sbjct: 306 QGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLF--HDMVDSGVKPDD 363
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y A++S R G KI + L+ +S+ + ++S Y K + A +
Sbjct: 364 ATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYR 423
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCL----KGAFAAEGAKSWRPKPVNVIN 466
I E G P ++++ L +G+ + +EA S L K F A PV+ +N
Sbjct: 424 IREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQA---------PVSSVN 472
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 152/340 (44%), Gaps = 29/340 (8%)
Query: 102 RSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVAS 161
+ L KW L V E+ ++ RY++ W N S D + + K+
Sbjct: 57 KQLKKWNL---VSEILEWLRYQN------WWN-------FSEIDFLMLITAYGKLGNFNG 100
Query: 162 AEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
AE LS + + Y AL+ +Y R NAE + +M+ G ++ Y +++
Sbjct: 101 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 160
Query: 220 LYM---KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK 276
++ K KE +EV + + K+ ++ D Y++ + G+ EK VF M V K
Sbjct: 161 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM-VGK 219
Query: 277 AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
V + T++++ + +V K + ++R + + D V Y L+ YG ++EE
Sbjct: 220 GVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ---PDVVSYALLIKAYGRARREEEA 276
Query: 337 YRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
V+ L V P T+ Y+ ++ + A G +E + +F+ + D M+
Sbjct: 277 LSVFEEMLDAGVRP--THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 334
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
S YV + + AE FF I +G +PN ++ TL +G+ +
Sbjct: 335 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 374
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 27/299 (9%)
Query: 146 AAIQLDLIAK--VHG--VASAEDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAE 196
+AI +I K V G AE+ F +L D K D+++Y ++ Y +A A
Sbjct: 151 SAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKAR 210
Query: 197 LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
+ M KG ++ YN +M+ Y EV + +M+ I+ DV SY + + +
Sbjct: 211 KVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAY 267
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
G E+ VFE M +D V P ++ + + G VE+A+ + + RD
Sbjct: 268 GRARREEEALSVFEEM-LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR-----RD 321
Query: 317 RV-----PYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIE 369
R+ Y +LS Y + E + + + P + Y +I A+ D+E
Sbjct: 322 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT--YGTLIKGYAKANDVE 379
Query: 370 GMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
M +++E+ + I +M + NF A ++ + G P+ + L
Sbjct: 380 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVL 438
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 19/281 (6%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LPD + Y L+N + A L+++M +KG +++ +N+M+ Y K + D
Sbjct: 345 LPDVVS----YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFEL----MKVDKAVNPNWT 283
+ + +++M+E G D +YN ++ C + E + E+ MK+D
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSV------ 454
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
T +T+ + ++E+A + L R D V Y L+ Y G + ++W+
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
Query: 344 --RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ + P + + Y+ +I L + G E E L D N ++ Y +EG
Sbjct: 515 KEKEIIP--STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREG 572
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ +KA F N ++E KP+ + L G E + +AL
Sbjct: 573 DVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKAL 613
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 117/269 (43%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N Y +A G A +D+M K + S+ N ++ + K+ +E ++
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S +++G +D SY + G+ ++ +++ MK +K + P+ T++ + +
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMK-EKEIIPSTVTYNCIIGGLCQ 535
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G+ E+A L + D Y+ +L Y G E+ ++ N + S P V
Sbjct: 536 CGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV-- 593
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ ++ L G +E K+F W+S + D N +++ KEG D A +
Sbjct: 594 FTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ E+ P+ ++ + RI EA
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREA 682
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 133/327 (40%), Gaps = 9/327 (2%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQ--LDLIAKVHGVASAEDFFLSLPD--TLKDR 176
++K A+E + M ++ S + LD + K + A D + + L +R
Sbjct: 223 KFKDAVEFLNVMG----KYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNR 278
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y L+ Y + A +I+ M YN+++ +E + E
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDE 338
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M+ + DV SYN ++ C + + E M +K V PN T + M Y K G
Sbjct: 339 MENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS-EKGVKPNAVTHNIMVKWYCKEG 397
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+++ A ++ ++E D V Y+ L++ Y G E +R + + ++ +
Sbjct: 398 KMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ +L R +E K+ D ++ Y K+GN D+A ++ + E+
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517
Query: 417 GGKPNSTSWETLAEGHIRERRILEALS 443
P++ ++ + G + + +A+S
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAIS 544
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 118/272 (43%), Gaps = 1/272 (0%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ L D Y L+N A L D+M + + YN ++ ++ + E
Sbjct: 308 NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEA 367
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++ EM EKG++ + ++NI + +G + M+ + +P+ T++T+
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME-ESGFSPDCVTYNTLIN 426
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
Y K G + +A ++ + + D V + +L K EE Y++ + R +
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI 486
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y +I + G+++ K+++E + N ++ + G ++A +
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
N ++E G P+ T++ T+ G+ RE + +A
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGDVEKAF 578
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 115/276 (41%), Gaps = 40/276 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L+A + G+A L+ M+ +G + YN+++ Y K+ E +++
Sbjct: 242 DNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVI 301
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M + + DV++YN+ ++ ++G E+ + + M+ K + P+ +++T+ ++
Sbjct: 302 ELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL-PDVVSYNTLINGCLE 360
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++ +A + L + + + V ++ ++ Y GK ++
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT--------------- 405
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNS 412
I ME+ S + P N +++ Y K GN +A +
Sbjct: 406 -------------ITKMEE---------SGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGA 448
+ + K +S + T+ RE+++ EA L A
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479
>gi|359490014|ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 202 MRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
+ + G + + YN + ++ + D+ ++++M+ G L + SY + + GS G
Sbjct: 14 ISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGR 73
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
T + E +F M V + + ++ M ++ G +E A++ L +++ GR+R Y
Sbjct: 74 TLEAEAIFREM-VHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYE 132
Query: 322 YLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
L+ YG G+ +V+ V + R F G + Y +I G + +I E
Sbjct: 133 ALVDYYGRAGRLNDVWAVIGEMSRDGF-GPDSFVYSKVIGVYRDNGMWKKAMEIVREIRE 191
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
+ S D RI N ++ + K G +A F + EEG KP+ +W +L + H + + +
Sbjct: 192 MGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGK 251
Query: 441 AL 442
AL
Sbjct: 252 AL 253
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 107/253 (42%), Gaps = 5/253 (1%)
Query: 180 GALLNAYVRARMR----GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
G + NA +R R A L+ +M G+++ Y ++ + E E++
Sbjct: 23 GVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFR 82
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM G++LD+ YN+ L SC +G E + V M + N T+ + Y +
Sbjct: 83 EMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDA-LGIGRNRATYEALVDYYGRA 141
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G++ + + G D Y ++ +Y G ++ + R + + Y
Sbjct: 142 GRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIY 201
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+++I + + G++ ++FE+ D N ++ W+ K G+ KA F+ + E
Sbjct: 202 NSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQE 261
Query: 416 EGGKPNSTSWETL 428
EG P+ + T+
Sbjct: 262 EGLYPDPKIFITI 274
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 148/361 (40%), Gaps = 21/361 (5%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L E G SL+ V++ L R A ++ M + G + L + ++ L
Sbjct: 45 LLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNVMLRSCL 104
Query: 153 IAKVHGVASAEDFFLSLPDTL---KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
G+ D L+ D L ++R Y AL++ Y RA + +I +M G+
Sbjct: 105 ---RKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGP 161
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
S Y+ ++ +Y + + +V E++E G+ LD YN + + G G + VF
Sbjct: 162 DSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVF 221
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
E M+ ++ V P+ T++++ + K G V KA E +++ D + ++S G
Sbjct: 222 EKMQ-EEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGE 280
Query: 330 VGKKEEVYRVWNLYRSVFPGVTNLG-------YHAMISSLARIGDIEGMEKIFEEWLSVK 382
GK W++ + F + G Y ++ + G +G E+ S
Sbjct: 281 QGK-------WDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEG 333
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ ++ + Y ++G ++ + EG +PN L R LEAL
Sbjct: 334 IQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEAL 393
Query: 443 S 443
S
Sbjct: 394 S 394
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 143/337 (42%), Gaps = 23/337 (6%)
Query: 104 LTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAE 163
L +L ++K L ++ AL + W G A+D +++ + G
Sbjct: 110 LRAADLPSLLKALELSGHWEWALALLRWARAEG------AADGPAPFEMVVRALGREGRH 163
Query: 164 DFFLSLPDTLK-------DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
D +L D + D R Y +L+A R A L D++R +G A + YNV
Sbjct: 164 DAVCALLDEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNV 223
Query: 217 MMTLYMKI-KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ +Y ++ + + V +++++M+ G+ D ++ + +++ G G ++ FE +K
Sbjct: 224 VLDVYGRMGRSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKA- 282
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ P T++ + ++ K G +A LR +E D V Y+ L Y G +E
Sbjct: 283 RGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQE 342
Query: 336 VYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP--RIAN 391
+ + + + + P Y+ ++++ G ++ +F+ K+ + P N
Sbjct: 343 AAKCIDTMIGKGLLP--NTFTYNTIMTAYGNAGKVDEALALFDRM--KKNGFIPYTNTYN 398
Query: 392 LMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
L++ K+ F + G PN +W TL
Sbjct: 399 LVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTL 435
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 115/257 (44%), Gaps = 1/257 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ALL + +A A ++ +M D G ++ YN + Y + Y E + M
Sbjct: 291 TYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTM 350
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG+ + ++YN +++ G+ G ++ +F+ MK + + P T++ + M K +
Sbjct: 351 IGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFI-PYTNTYNLVLGMLGKKSR 409
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
E L + +RV ++ LL++ G G + V RV +S + Y+
Sbjct: 410 FAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNT 469
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+I + R G K+++E + + N +++ ++G++ A + + + EG
Sbjct: 470 LICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEG 529
Query: 418 GKPNSTSWETLAEGHIR 434
KPN S+ L + H +
Sbjct: 530 FKPNDMSYSLLLQCHAK 546
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 141/345 (40%), Gaps = 22/345 (6%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V+ L K R+ LE+ GE R + + + + V G E + + +
Sbjct: 400 VLGMLGKKSRFAAMLEML------GEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLE 453
Query: 172 TLKD------RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
+K R Y L+ AY R R NA + D+M G+A YN ++ + +
Sbjct: 454 GMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQG 513
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
++ S+VS+MK +G + + SY++ L G+ +E + E + P+W
Sbjct: 514 DWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAI-EKEVYQGNIFPSWVIL 572
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
T+ K ++E E + + V++R D V + +LS+Y G + ++
Sbjct: 573 RTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQ 632
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW-------LSVKSSYDPRIA--NLMMSW 396
+ + Y++++ A+ + EKI + P + N +++
Sbjct: 633 LGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVING 692
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ KEG +A+ + +I +G P ++ TL G+ EA
Sbjct: 693 FCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEA 737
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 116/290 (40%), Gaps = 9/290 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L +Y RA A ID M KG ++ YN +MT Y + DE ++
Sbjct: 323 DAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALF 382
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMY 292
MK+ G +YN+ L G G + + E++ PN T++T+ +
Sbjct: 383 DRMKKNGFIPYTNTYNLVL---GMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVC 439
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K G L ++S R Y+ L+ YG G + +++++ +
Sbjct: 440 GKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCL 499
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+A+++ L+R GD I + S + +L++ + K GN EA
Sbjct: 500 TTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKE 559
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
+ + P+ TL + + RR L ++ AF A+ +P V
Sbjct: 560 VYQGNIFPSWVILRTLVIANFKCRR----LEGIERAFQEVKARGHKPDLV 605
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 125/314 (39%), Gaps = 52/314 (16%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LP+T Y ++ AY A A L D+M+ G+ ++ YN+++ + K +
Sbjct: 356 LPNTF----TYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFA 411
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK------------ 276
+ M+ EM G + ++N L+ CG +G + V E MK K
Sbjct: 412 AMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLI 471
Query: 277 ----------------------AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
P TT++ + + + G A + +++S
Sbjct: 472 CAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFK 531
Query: 315 RDRVPYHYLLSLYGSVGK-------KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD 367
+ + Y LL + G ++EVY+ ++FP L ++ + +
Sbjct: 532 PNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQ-----GNIFPSWVIL--RTLVIANFKCRR 584
Query: 368 IEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWET 427
+EG+E+ F+E + D I N M+S Y K G + KA F SI + G P+ ++ +
Sbjct: 585 LEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNS 644
Query: 428 LAEGHIRERRILEA 441
L + + + EA
Sbjct: 645 LMDMYAKSNEPWEA 658
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 105/243 (43%), Gaps = 3/243 (1%)
Query: 203 RDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK-EKGIRLDVYSYNIWLSSCGSQGS 261
R +G A P+ +++ + +D V +++ EM G RLDV +Y L + +G
Sbjct: 139 RAEGAADGPAPFEMVVRALGREGRHDAVCALLDEMPLPPGARLDVRAYTTVLHALSREGR 198
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV-EKAEESLRRVESRITGRDRVPY 320
E+ +F+ ++ + V P T++ + +Y +MG+ + L + + D
Sbjct: 199 YERALRLFDELR-REGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAGVEPDGFTA 257
Query: 321 HYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS 380
+++ G G +E + ++ + Y+A++ + G+ ++ E
Sbjct: 258 STVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMED 317
Query: 381 VKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILE 440
D N + Y + G + +A +++I +G PN+ ++ T+ + ++ E
Sbjct: 318 AGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDE 377
Query: 441 ALS 443
AL+
Sbjct: 378 ALA 380
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 146/351 (41%), Gaps = 9/351 (2%)
Query: 95 NDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIA 154
ND G + +++ L + +R++ A V+ M +G + +I + +
Sbjct: 41 NDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG--CSPNVFSYSILIAGLC 98
Query: 155 KVHGVASAEDFFLSLPDTLKDRRV--YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
+ V A + + D V YG+LL+ + A L +M +G +
Sbjct: 99 RGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV 158
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM 272
YNV++ + K + E + EM EKG V++YN LS +G +++ +F+ M
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
+ + PN TF+ + + KMG + +A + S D V Y+ L+ S GK
Sbjct: 219 -LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGK 277
Query: 333 KEEVYRVW-NLYRS-VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
E R+ + RS V P + + Y+ +I ++ G ++ K+F E D
Sbjct: 278 PHEAQRLLREMIRSGVGPDIVS--YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSY 335
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ ++ + G A F +I G P++ L G R R+ E+
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTES 386
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 11/243 (4%)
Query: 206 GYAVH----SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS 261
G VH +L YN ++ + K D V ++M G + Y+Y L S
Sbjct: 8 GSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQR 67
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
E+ VF M + +PN ++S + + +V++A E L + + V Y
Sbjct: 68 FEEARSVFRGMAA-QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFP-GVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
LLS +GK +E +++ +YR P GV Y+ +I ++ GD+ ++FEE
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVV---YNVLIDGFSKKGDMGEAYRLFEEM 183
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
L N ++S + ++G F + ++ F ++ +G PN ++ L +G + +
Sbjct: 184 LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243
Query: 439 LEA 441
+EA
Sbjct: 244 VEA 246
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 125/266 (46%), Gaps = 9/266 (3%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+LLN Y ++ A L+D+M GY +++ +N ++ + E +++ M K
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAK 215
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G + D+ +Y + ++ +G T+ + M+ K + P ++T+ K ++
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGK-LEPGVLIYTTIIDGLCKNKHMDD 274
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAM 358
A + +E++ + V Y L+S + G+ + R+ + + R + P V + A+
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV--FTFSAL 332
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEE 416
I + + G + EK+++E VK S DP I +++ + D+A+ F ++ +
Sbjct: 333 IDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
P+ S+ TL +G + +R+ E +
Sbjct: 391 HCFPDVVSYSTLIKGFCKAKRVDEGM 416
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 125/274 (45%), Gaps = 13/274 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAEL---LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
D YG ++N + RG+ +L L++KM L Y ++ K K D+
Sbjct: 220 DLVTYGVVVNGLCK---RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDAL 276
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ EM+ KGIR +V +Y+ +S + G + M +++ +NP+ TFS +
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDA 335
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPG 349
++K G++ +AE+ + R V Y L++ + + +E +++ S FP
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 350 VTNLGYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA 408
V + Y +I + + EGME +F E + ++ + G+ D A+
Sbjct: 396 VVS--YSTLIKGFCKAKRVDEGME-LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQE 452
Query: 409 FFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
F ++ +G PN ++ TL +G + ++ +A+
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 149/350 (42%), Gaps = 15/350 (4%)
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+LN E+G ++ L K + AL ++ M +G R + L
Sbjct: 243 LLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIR-----PNVVTYSSL 297
Query: 153 IAKVHGVASAEDFFLSLPDTLK-----DRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
I+ + D L D ++ D + AL++A+V+ AE L D+M +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKME 266
+ Y+ ++ + DE + M M K DV SY+ + C ++ E ME
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGME 417
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
E+ + + + N T++T+ + G + A+E + + S + + Y+ LL
Sbjct: 418 LFREMSQ--RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
GK E+ V+ + T Y+ MI + + G +E +F LS+K
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVKP 534
Query: 387 PRIA-NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+A N M+S + ++G+ ++A+A F + E+G PNS + TL +R+
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 100/238 (42%), Gaps = 6/238 (2%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
PD + Y L+ + +A+ L +M +G +++ Y ++ + + D
Sbjct: 393 FPDVVS----YSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCD 448
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ + EM G+ ++ +YN L G EK VFE ++ K + P T++ M
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIM 507
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
K G+VE + + + D V Y+ ++S + G KEE ++ +
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
+ Y+ +I + R GD E ++ +E S + D L+ + + +G DK+
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM-LHDGRLDKS 624
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 118/265 (44%), Gaps = 5/265 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ +A+M A+ + M DKG ++ Y ++ Y+ ++ EV M+ EM
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMS 264
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
G++ D Y + L G + +F+ + + K + P+ T + + Y G +
Sbjct: 265 THGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSL-IRKGIKPHVTIYGILLHGYATEGAL 323
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTNLGYH 356
+ L + D ++ + + Y +E +++ R + PGV N Y
Sbjct: 324 SEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN--YG 381
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
A+I +L ++G ++ F + ++ + D + + ++ ++KAE F ++++
Sbjct: 382 ALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQ 441
Query: 417 GGKPNSTSWETLAEGHIRERRILEA 441
G + N+ + L RE R++EA
Sbjct: 442 GIRLNAAFFNILMCNLCREGRVMEA 466
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 139/335 (41%), Gaps = 8/335 (2%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRL-SASDAAIQLDLIAKVHGVASAEDFFLSLP 170
++K L +R + ALE+ M + G+ + +D + K V A+ F +
Sbjct: 170 LLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMI 229
Query: 171 D--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
D + Y L++ Y+ ++ +M G + Y V++ K
Sbjct: 230 DKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCT 289
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
E ++ + KGI+ V Y I L ++G+ +M +LM V V+P+ F+ M
Sbjct: 290 EARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLM-VRNGVSPDHHIFNIM 348
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFP 348
Y K +++A ++ + V Y L+ +G+ ++ +N + +
Sbjct: 349 FNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFN--QMINE 406
Query: 349 GVTN--LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
GVT + +++ L + E EK+F E L + N++M +EG +A
Sbjct: 407 GVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEA 466
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ + ++ +P+ S+ TL +GH RI EA
Sbjct: 467 QRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEA 501
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/360 (18%), Positives = 150/360 (41%), Gaps = 42/360 (11%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YGAL++A + +A L ++M ++G ++ ++ + ++++ E + E+
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVL 439
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM-KVDKAVNPNWTTFSTMATMYIKMGQ 297
++GIRL+ +NI + + +G + + + +LM +VD V P+ +++T+ + G+
Sbjct: 440 DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVD--VRPDVISYNTLVDGHCLTGR 497
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN------------LYRS 345
+++A + L + S D Y+ LL Y + ++ Y ++ Y +
Sbjct: 498 IDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNT 557
Query: 346 VFPGVTNLG-----------------------YHAMISSLARIGDIEGMEKIFEEWLSVK 382
+ G+ +G Y +++ L R ++ K+F+ S
Sbjct: 558 ILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKD 617
Query: 383 SSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
D N+M+ +K G + A F +I G P+ ++ +AE I+E + E
Sbjct: 618 LQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEE-- 675
Query: 443 SCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
L F+A P + + D+G +++ L + + E S++
Sbjct: 676 --LDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSML 733
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 105/249 (42%), Gaps = 9/249 (3%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y L++ + A L+D M G YN ++ Y K + D+
Sbjct: 480 PDVIS----YNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDD 535
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
S+ EM KG+ V +YN L G + + ++ L ++ + T++ +
Sbjct: 536 AYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELY-LNMINNRRKCDIYTYTIIL 594
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VF 347
+ V++A + + + S+ D + ++ G+KE+ ++ + +
Sbjct: 595 NGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLV 654
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P V Y + +L + G +E ++++F ++ + R+ N ++ W + G+ +A
Sbjct: 655 PDVET--YRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAG 712
Query: 408 AFFNSIIEE 416
+ + + E+
Sbjct: 713 VYLSKLDEK 721
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 150/359 (41%), Gaps = 12/359 (3%)
Query: 74 NAIFRKLS-----LMDNPQLG--SASVLNDWEKGGRSLTKWE-LCRVVKELRKFRRYKHA 125
+ IF LS +MD Q G + S+ + SL W+ + V +LR +++
Sbjct: 86 DGIFPVLSPTAKKIMDYLQKGVDTESIWGSLDMLQASLEIWDDILTVSVQLRMRKQWDSI 145
Query: 126 LEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALL 183
+ + W+ R F+ + +D + AE +L L + + + Y L+
Sbjct: 146 ISICRWILLRSS-FKQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLI 204
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR 243
AY + + AE + +M++ G ++ YN + MK ++ E + MK G +
Sbjct: 205 KAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCK 264
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
+Y + ++ G G + VF M K PN T++ + + + G EKAEE
Sbjct: 265 PSTETYTMLINLYGKDGKSFMALKVFNEMLSHKC-KPNICTYTALVNAFAREGLCEKAEE 323
Query: 304 SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLA 363
+++ D Y+ L+ Y G +++L + + Y+ ++ +
Sbjct: 324 VFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYG 383
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
R G + E +FE+ V + + +++S + K GN K E N + + G K ++
Sbjct: 384 RAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDT 442
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 105/238 (44%), Gaps = 6/238 (2%)
Query: 184 NAYVRARMRGN----AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
N+Y+ M+G AE + +M+ G + Y +++ LY K + + +EM
Sbjct: 236 NSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLS 295
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+ ++ +Y +++ +G EK E VFE M+ + + P+ +++ + Y + G
Sbjct: 296 HKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQ-EAGLEPDVYSYNALMEAYSRAGFPY 354
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
A E ++ DR Y+ L+ YG G + V+ + V T + ++
Sbjct: 355 GAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLL 414
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
S+ ++ G++ E I + D + N M++ Y + G F K E +++E G
Sbjct: 415 SAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL-TVMENG 471
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 88/233 (37%), Gaps = 36/233 (15%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y AL+NA+ R + AE + ++M++ G YN +M Y + + S M
Sbjct: 304 TYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLM 363
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G D SYNI + + G G E VFE MK + P + + + + K G
Sbjct: 364 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMK-RVGITPTMKSHMVLLSAFSKTGN 422
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
V K E+ L ++ D + +L+LYG
Sbjct: 423 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYG----------------------------- 453
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
R+G ME++ + D N++++ Y + G DK E F
Sbjct: 454 ------RLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLF 500
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL+ AY RA A + M+ G YN+++ Y + ++ E++
Sbjct: 336 DVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVF 395
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+MK GI + S+ + LS+ G+ K E + M + + ++M +Y +
Sbjct: 396 EDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM-CKSGLKLDTFVLNSMLNLYGR 454
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
+GQ K EE L +E+ D Y+ L++ YG G
Sbjct: 455 LGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAG 491
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
DR Y L++AY RA +AE + + M+ G + V+++ + K + E ++
Sbjct: 371 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 430
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M + G++LD + N L+ G G KME V +M+ + + + +T++ + Y +
Sbjct: 431 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME-NGSCEADISTYNILINRYGQ 489
Query: 295 MGQVEKAE 302
G ++K E
Sbjct: 490 AGFIDKME 497
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 125 ALEVYDWMNNRG-ERFRLSASDAAIQLDLIAKVHGVASAEDFF-----LSLPDTLKDRRV 178
A E++ M + G E R S + I +D + + AE F + + T+K V
Sbjct: 356 AAEIFSLMQHMGCEPDRASYN---ILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMV 412
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
LL+A+ + E ++++M G + + N M+ LY ++ ++ ++E +++ M+
Sbjct: 413 ---LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME 469
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
D+ +YNI ++ G G +KMEG+F
Sbjct: 470 NGSCEADISTYNILINRYGQAGFIDKMEGLF 500
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 40/261 (15%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMR----DKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
++ +L V+ RMR + +I R + + YN+++ + + Y E ES
Sbjct: 125 IWDDILTVSVQLRMRKQWDSIISICRWILLRSSFKQDVICYNLLIDAFGQKFLYKEAEST 184
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
++ E + +Y + + + G EK E VF MK + + + +++ +
Sbjct: 185 YLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFVEMK-NYGLPSSAVVYNSYINGLM 243
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G KAEE R++ Y L++LYG GK
Sbjct: 244 KGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKS-------------------- 283
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
+ A+ K+F E LS K + +++ + +EG +KAE F +
Sbjct: 284 -FMAL--------------KVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQM 328
Query: 414 IEEGGKPNSTSWETLAEGHIR 434
E G +P+ S+ L E + R
Sbjct: 329 QEAGLEPDVYSYNALMEAYSR 349
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 124/264 (46%), Gaps = 6/264 (2%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LL+A V+ G+ E + +M + + +N+ + + + ++ E + +MK G
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKMGQVE 299
I +V +YN + +GS KM MK + + PN TF+T+ + K V
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
A+++ ++ + + V Y+ L++ + GK EE +W+ + + Y+A+I
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEG 417
+ + ++ K+F++ K P + N M+ Y KEG ++ + +S+++EG
Sbjct: 351 NGFCKKKMMKEATKVFDD--VSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408
Query: 418 GKPNSTSWETLAEGHIRERRILEA 441
PN +++ L G R++ + A
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAA 432
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/350 (18%), Positives = 144/350 (41%), Gaps = 51/350 (14%)
Query: 139 FRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDR-----RVYGALLNAYVRARMRG 193
F+LS + L + K + + E + + +K R + +N RA
Sbjct: 161 FKLSLTSCNPLLSALVKENKIGDVEYVY---KEMIKRRIHTNLNTFNIFINGLCRAGKLN 217
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMK------------------------------ 223
AE I+ M+ G + + + YN ++ Y K
Sbjct: 218 KAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFN 277
Query: 224 --IKEYDEVESMVS------EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
I + + E++ + EM+++G++ ++ +YN ++ + G E+ +++ M V
Sbjct: 278 TLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKM-VG 336
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
+ PN T++ + + K +++A + V + + + ++ ++ Y G EE
Sbjct: 337 LGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEE 396
Query: 336 VYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+ + + L + P V+ Y+ +I+ L R D++ +++ E + D N++
Sbjct: 397 GFSLCSSMLDEGILPNVST--YNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNIL 454
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ K AE N + G KPN ++ TL +G+ E ++ AL+
Sbjct: 455 IDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 126/288 (43%), Gaps = 17/288 (5%)
Query: 150 LDLIAKVHGVASAEDFFLSL-PDTLKDRRV-YGALLNAYVRARMRGNAELLIDKMRDKGY 207
+D K VA+A+ F + LK V Y +L+N A L DKM G
Sbjct: 280 IDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL 339
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ + YN ++ + K K E + ++ ++ + +V ++N + + +G E+
Sbjct: 340 KPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFS 399
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ M +D+ + PN +T++ + + ++ A+E L +E++ D V Y+ L+
Sbjct: 400 LCSSM-LDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILID-- 456
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD- 386
+ K ++ L +F NLG + + D ME + L+V++ +
Sbjct: 457 -GLCKNDKSRNAEKLLNEMF----NLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEK 511
Query: 387 ----PRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
P + N+++ Y K + A N ++E+G PN T+++ +
Sbjct: 512 ERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/321 (18%), Positives = 128/321 (39%), Gaps = 44/321 (13%)
Query: 178 VYGALLNAYVRARMRGN---AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
Y L++ Y + G AE + +M + + +N ++ + K + +
Sbjct: 237 TYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAF 296
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM+++G++ ++ +YN ++ + G E+ +++ M V + PN T++ + + K
Sbjct: 297 EEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKM-VGLGLKPNIVTYNALINGFCK 355
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+++A + V + + + ++ ++ Y G EE + + + L + P V+
Sbjct: 356 KKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVST 415
Query: 353 LGYHAMISSLARIGD--------------------------IEGM---------EKIFEE 377
Y+ +I+ L R D I+G+ EK+ E
Sbjct: 416 --YNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNE 473
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
++ + N +M Y EG A + +E +PN ++ L +G+ + +
Sbjct: 474 MFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINK 533
Query: 438 ILEALSCLKGAFAAEGAKSWR 458
LEA + L +G R
Sbjct: 534 -LEAANGLLNEMLEKGLNPNR 553
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ + NAE L+++M + G + + YN +M Y + ++
Sbjct: 447 DVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVR 506
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ M+++ + +V +YN+ + E G+ M ++K +NPN TT+ + ++
Sbjct: 507 TRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEM-LEKGLNPNRTTYDIVRLEMLE 565
Query: 295 MGQVEKAEESLRRVES 310
G E L + S
Sbjct: 566 KGFSPDIEGHLYNISS 581
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 119/283 (42%), Gaps = 9/283 (3%)
Query: 167 LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKE 226
L + L YGAL+N + +A + L+ +M +G ++ +N ++ K
Sbjct: 262 LKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGL 321
Query: 227 YDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFS 286
+ + M E G D+ +YN ++ G ++ + E K ++ + PN +++
Sbjct: 322 VTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAK-ERGLLPNKFSYT 380
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE----EVYRVWNL 342
+ Y K G KA L R+ D V Y + +G V E + R +
Sbjct: 381 PLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFI--HGVVVHGEIDVALMVREKMM 438
Query: 343 YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+ VFP Y+ ++S L + G M+ + E L D + +M +++ G
Sbjct: 439 EKGVFPDAQI--YNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGE 496
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
D+A F II +G P + + +G + ++ +ALSCL
Sbjct: 497 LDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCL 539
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 120/270 (44%), Gaps = 5/270 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ Y + A + +++ KG Y ++ + K E++ V+ +++EM
Sbjct: 239 YNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMA 298
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+G+ ++V +N + + G K M + P+ TT++TM K G++
Sbjct: 299 ARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRM-AEMGCGPDITTYNTMINFSCKGGRI 357
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN--LGYH 356
++A+E L + + R ++ Y L+ Y G + V L+R G + Y
Sbjct: 358 KEADEFLEKAKERGLLPNKFSYTPLMHAYCKQG--DYVKAAGMLFRIAEIGEKPDLVSYG 415
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
A I + G+I+ + E+ + D +I N++MS K G F + + +++
Sbjct: 416 AFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDR 475
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLK 446
+P+ + TL +G IR + EA+ K
Sbjct: 476 NVQPDVYVFATLMDGFIRNGELDEAIKIFK 505
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 143/339 (42%), Gaps = 9/339 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N + A+ ++K +++G + Y +M Y K +Y + M+
Sbjct: 340 DITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGML 399
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+ E G + D+ SY ++ G + V E M ++K V P+ ++ + + K
Sbjct: 400 FRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKM-MEKGVFPDAQIYNVLMSGLCK 458
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
G+ + L + R D + L+ + G+ +E +++ + + V PG+
Sbjct: 459 NGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGI-- 516
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+GY+AMI + G + + +V + D + ++ YVK+ + A F
Sbjct: 517 VGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQ 576
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACE 472
+++ KPN ++ +L G ++ ++ A +G + + + V FFKA +
Sbjct: 577 MMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGK 636
Query: 473 EESDMGSKEAFVALLRQPGYRKEKDYMSLI-GLTDEAVA 510
E + F +L + + LI GLT+ A +
Sbjct: 637 PEK---ATSIFELMLMNGCPPNDATFHYLINGLTNTATS 672
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 111/279 (39%), Gaps = 31/279 (11%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D V+ L++ ++R A + + KG + YN M+ + K + + S +
Sbjct: 480 DVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCL 539
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQ---GSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++MK D Y+Y+ + Q S KM G ++MK PN T++++
Sbjct: 540 NKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFG--QMMK--HKFKPNVITYTSLING 595
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
+ K + +AE+ R ++S + V Y L+ + GK E+ ++ L
Sbjct: 596 FCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPN 655
Query: 352 NLGYHAMISSLAR-------IGDIEGMEK------------IFEEWLSVKSSYDPRIANL 392
+ +H +I+ L I + + ME + E W V ++Y+ I L
Sbjct: 656 DATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCL 715
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
K G D A+ ++ +G +S + + G
Sbjct: 716 -----CKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHG 749
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 135/329 (41%), Gaps = 41/329 (12%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAV 209
L L ++H D ++L L ++ YG L+N + A L+ ++ K
Sbjct: 136 LCLKGQIHQALHFHDKVVALGFHL-NKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQP 194
Query: 210 HSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF 269
+ + YN ++ K+K +E + SEM KGI DV +Y+ +S G G+F
Sbjct: 195 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLF 254
Query: 270 ELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY-- 327
M + + +NP+ TFS + + K G+V++A+ L + + D V Y L+ Y
Sbjct: 255 NKM-ISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCL 313
Query: 328 ----------------GSVGKKEEVYRV--------------WNLY-----RSVFPGVTN 352
G V + Y + NL+ +++ P V
Sbjct: 314 VKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVT 373
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+++I L + G I K+ +E +D N ++ K DKA A
Sbjct: 374 --YNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 431
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ +EG +P+ ++ L +G + R+ +A
Sbjct: 432 MKDEGIQPDMYTYTILIDGLCKGGRLKDA 460
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 102/254 (40%), Gaps = 36/254 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L++ Y + A+ + + M G + YN+M+ + KIK+ DE ++
Sbjct: 300 DVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLF 359
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM K I DV +YN + G + + M D+ V + T++++ K
Sbjct: 360 KEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH-DRGVPHDKITYNSILDALCK 418
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
QV+KA L +++ G + ++Y
Sbjct: 419 NHQVDKAIALLTKMKDE-------------------GIQPDMYT---------------- 443
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +I L + G ++ + IFE+ L + +M+ + FDKA A + +
Sbjct: 444 YTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKME 503
Query: 415 EEGGKPNSTSWETL 428
+ G PN+ ++E +
Sbjct: 504 DNGCIPNAKTYEII 517
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 5/202 (2%)
Query: 110 CRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--L 167
C ++ ++ A +++ M G + + + I ++ K+ V A + F +
Sbjct: 305 CSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYN--IMINGFCKIKKVDEAMNLFKEM 362
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
+ + D Y +L++ ++ A L+D+M D+G + YN ++ K +
Sbjct: 363 HCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQV 422
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFST 287
D+ +++++MK++GI+ D+Y+Y I + G + + +FE + V K N T++
Sbjct: 423 DKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLV-KGYNITVYTYTV 481
Query: 288 MATMYIKMGQVEKAEESLRRVE 309
M + +KA L ++E
Sbjct: 482 MIQGFCDNDLFDKALALLSKME 503
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/308 (18%), Positives = 123/308 (39%), Gaps = 46/308 (14%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+G +L + V+ A L +M G A + +N+++ + ++ S+ + +
Sbjct: 59 FGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANIL 118
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KG + + + +G + F V + N + T+ K+GQ
Sbjct: 119 KKGYEPNAITLTTLIKGLCLKGQIHQALH-FHDKVVALGFHLNKVCYGTLINGLCKVGQT 177
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVTNL 353
A + LRRV+ ++ + V Y+ ++ S+ K + V ++LY + + P V
Sbjct: 178 SAALQLLRRVDGKLVQPNVVMYNTIID---SMCKVKLVNEAFDLYSEMVSKGISPDVVT- 233
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG------------ 401
Y A+IS +G + +F + +S + + D ++++ + KEG
Sbjct: 234 -YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMM 292
Query: 402 -----------------------NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+KA++ FN++ + G N S+ + G + +++
Sbjct: 293 MKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKV 352
Query: 439 LEALSCLK 446
EA++ K
Sbjct: 353 DEAMNLFK 360
>gi|297833394|ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
gi|297330419|gb|EFH60838.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
Length = 486
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 118/261 (45%), Gaps = 18/261 (6%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL-PYNVMMTLYMKIKEYDEVESMVSE 236
+Y ALL AY R+ + +A ++D M+ + Y+ ++ + ++D V+S+ E
Sbjct: 161 LYTALLAAYTRSNLIDDAFSILDTMKGLPQCQPDVFTYSTLLKACVDASQFDLVDSLYKE 220
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M E+ I + + NI LS G G ++ME V M V A P+ T + + +++ MG
Sbjct: 221 MDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMG 280
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV-FPGVTNLGY 355
+++ E + + + ++ L+ YG +++ V R + FP T+ Y
Sbjct: 281 KIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTST-Y 339
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA--------- 406
+ +I + A +GD + ME F++ S D + +++ Y G F K
Sbjct: 340 NNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAK 399
Query: 407 ------EAFFNSIIEEGGKPN 421
AF+N++I K +
Sbjct: 400 FEIPENTAFYNAVIAACAKAD 420
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 49/284 (17%)
Query: 164 DFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
D LP D Y LL A V A + L +M ++ +++ N++++ Y +
Sbjct: 183 DTMKGLPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGR 242
Query: 224 IKEYDEVESMVSEM-KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
+ +D++E ++S+M + DV++ NI LS G+ G + ME +E + + + P
Sbjct: 243 VGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFR-NFGIEPET 301
Query: 283 TTFSTM------ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
TF+ + MY KM V E +R++E T Y+ ++ + VG + +
Sbjct: 302 RTFNILIGSYGKKRMYDKMSSV---MEYMRKLEFPWTTS---TYNNIIEAFADVGDAKNM 355
Query: 337 YRVWNLYRS------------VFPGVTNLG-----------------------YHAMISS 361
++ RS + G N G Y+A+I++
Sbjct: 356 ELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVIAA 415
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
A+ D+ ME+++ + D R +M+ Y KEG DK
Sbjct: 416 CAKADDLIEMERVYTRMKERQCVCDSRTFEIMVEAYEKEGMNDK 459
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 97/212 (45%), Gaps = 6/212 (2%)
Query: 198 LIDKMRDKG-YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
+ D +R++ Y Y ++ L K + + + + EM E+G+ V Y L++
Sbjct: 110 VFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAY 169
Query: 257 GSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRD 316
+ + + MK P+ T+ST+ + Q + + + ++ R+ +
Sbjct: 170 TRSNLIDDAFSILDTMKGLPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPN 229
Query: 317 RVPYHYLLSLYGSVGKKEEVYRVWN---LYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
V + +LS YG VG+ +++ +V + + + P V + + ++S +G I+ ME
Sbjct: 230 TVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTM--NIILSVFGNMGKIDMMES 287
Query: 374 IFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+E++ + + R N+++ Y K+ +DK
Sbjct: 288 WYEKFRNFGIEPETRTFNILIGSYGKKRMYDK 319
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 152/339 (44%), Gaps = 33/339 (9%)
Query: 139 FRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELL 198
F D AIQ+ I + HG PD + Y A++ + RA +A +
Sbjct: 103 FTSKTIDKAIQVMHILENHG----------HPDLI----AYNAIITGFCRANRIDSAYQV 148
Query: 199 IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGS 258
+D+M++KG++ + YN+++ D +++ ++ + V +Y I + +
Sbjct: 149 LDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLL 208
Query: 259 QGST-EKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
QG E M+ + E+++++ + P+ T++++ + G V++A + + + S+ D
Sbjct: 209 QGGIDEAMKLLDEMLEIN--LQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDV 266
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIE---GMEKI 374
+ Y+ LL + GK E Y + + + + Y +ISS+ R G +E G+ K
Sbjct: 267 ITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKD 326
Query: 375 FEEWLSVKS---SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
++ +K YDP IA L KEG D A + +I +G P+ ++ T+
Sbjct: 327 MKKK-GLKPDGYCYDPLIAAL-----CKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC 380
Query: 432 HIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA 470
+++R EALS F G P + + F A
Sbjct: 381 LCKQKRADEALS----IFEKLGEVGCSPNASSYNSMFSA 415
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 120/288 (41%), Gaps = 7/288 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +++ R A +I + KGYA + YN+++ + +++ ++
Sbjct: 230 DMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELM 289
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S+M +G +V +Y++ +SS G E+ G+ + MK K + P+ + + K
Sbjct: 290 SDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMK-KKGLKPDGYCYDPLIAALCK 348
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+V+ A E L + S D V Y+ +L+ + +E ++ V
Sbjct: 349 EGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASS 408
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y++M S+L G + E L D N ++S ++G D+A +
Sbjct: 409 YNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDME 468
Query: 415 EEGG--KPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPK 460
E KP+ S+ + G + R+ +A+ L AA K RP
Sbjct: 469 MESSECKPSVVSYNIVLLGLCKVSRVSDAIEVL----AAMVDKGCRPN 512
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 133/297 (44%), Gaps = 7/297 (2%)
Query: 136 GERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRG 193
G+ R+ I L+ + +V + AE+ L + + Y L+NAY +
Sbjct: 318 GKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVK 377
Query: 194 NAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWL 253
A L ++M ++G + + +N +++ + + E D E+ V M EKG+ V +YN +
Sbjct: 378 KAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLI 437
Query: 254 SSCGSQGSTEKMEGVFELM-KVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESR 311
+ G +G + FE + ++DKA + PN ++ ++ K ++ AE L + R
Sbjct: 438 NGYGQKGHFVR---CFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGR 494
Query: 312 ITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGM 371
+ Y+ L+ S+ K ++ +R ++ T + Y+ +I+ L R G ++
Sbjct: 495 GVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKA 554
Query: 372 EKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
E +F + + D N ++S Y K N K ++ + G KP ++ L
Sbjct: 555 EDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPL 611
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 127/265 (47%), Gaps = 8/265 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +L+N Y + +D+M G + + Y ++ K ++ + E ++++M
Sbjct: 433 YNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMI 492
Query: 239 EKGIRLDVYSYNIWL-SSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMYIKM 295
+G+ + YN+ + +SC S K++ F + ++ T++T+ +
Sbjct: 493 GRGVSPNAEIYNMLIEASC----SLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRN 548
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G+V+KAE+ ++ + D + Y+ L+S Y ++ +++ + + T +
Sbjct: 549 GRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTF 608
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
H +I + + G + M+K+F+E L + D + N M+ Y ++GN KA + +++
Sbjct: 609 HPLIYACRKEGVVT-MDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVD 667
Query: 416 EGGKPNSTSWETLAEGHIRERRILE 440
+G + ++ +L ++R+RR+ E
Sbjct: 668 QGVDCDKVTYNSLILAYLRDRRVSE 692
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 151/365 (41%), Gaps = 41/365 (11%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLP 170
R+++ L R ++ L V+ + + G R A A+Q ++ K + F +
Sbjct: 127 RLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLK-----DLDKGFELMK 181
Query: 171 DTLKDRR-----VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
+KD Y +L + R +A L D+M + +++ YN ++ Y K+
Sbjct: 182 SMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVG 241
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFEL------------- 271
+E MKE+ + ++ +YN L+ CGS + E + E+
Sbjct: 242 GIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSF 301
Query: 272 -------------MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
+ K + + T+ + ++G++EKAEE L ++ ++
Sbjct: 302 VFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKI 361
Query: 319 PYHYLLSLYGSVG--KKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y+ L++ Y G KK + R + P + ++ +IS G+++ E
Sbjct: 362 SYNILVNAYCQEGDVKKAILTTEQMEERGLEP--NRITFNTVISKFCETGEVDHAETWVR 419
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+ S N +++ Y ++G+F + F + + + G KPN S+ +L ++R
Sbjct: 420 RMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR 479
Query: 437 RILEA 441
++++A
Sbjct: 480 KLIDA 484
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 108/241 (44%), Gaps = 12/241 (4%)
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
D G ++ Y + + +K+ D+ ++ M + G+ V++YN+ L +
Sbjct: 150 DSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIK 209
Query: 264 KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYL 323
+F+ M + + + PN T++T+ Y K+G +E+A R++ + + V Y+ L
Sbjct: 210 DARKLFDEM-IQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSL 268
Query: 324 LSLYGSVGKKEEVYRVW-NLYRSVF-PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
L+ G+ ++ V + S F PG G+ + + G G + +F+
Sbjct: 269 LNGLCGSGRVDDAREVLLEMEGSGFLPG----GFLSFVFDDHSNG--AGDDGLFD---GK 319
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ D R ++++ + G +KAE ++E G P+ S+ L + +E + +A
Sbjct: 320 EIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKA 379
Query: 442 L 442
+
Sbjct: 380 I 380
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVYG 180
+ LE+YD M G + + I + GV + + F + D + D+ VY
Sbjct: 587 QKCLELYDKMKILGIKPTVGTFHPLIY---ACRKEGVVTMDKMFQEMLQMDLVPDQFVYN 643
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
++ +Y A L +M D+G + YN ++ Y++ + E++ +V +MK K
Sbjct: 644 EMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAK 703
Query: 241 GIRLDVYSYNIWL 253
G+ V +YNI +
Sbjct: 704 GLVPKVDTYNILI 716
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 153/366 (41%), Gaps = 35/366 (9%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASA---EDFFLS 168
V+ L + R +HAL VY MN+ L+ + VHG++ A D
Sbjct: 121 VIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKL---------VHGLSKAGRLRDAVQV 171
Query: 169 LPDTLKDRRVY-GALLNAYVRARMRGN----AELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
L + + R V L V++ G+ A L+++M +G A +++ Y+ ++ K
Sbjct: 172 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 231
Query: 224 IKEYDE-VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNW 282
+ DE V ++ E+ +G D+ +Y+ + G +FE M + P
Sbjct: 232 CERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM----SCAPTA 287
Query: 283 TTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN- 341
T++++ Y + G +++A L ++ D + Y L+S + +G+ ++ Y ++
Sbjct: 288 ITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQ 347
Query: 342 -LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYV 398
+ + P V + +++ L G +E ++ EE + P I N ++ Y
Sbjct: 348 MVANKLSPDVVT--FTSLVDGLCGEGRMEDALELLEEI--TRRGCPPTIYTYNCVVDGYC 403
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWR 458
K KAE G PN+ ++ L G R R +AL L +EG
Sbjct: 404 KSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD-QLNSEGG---- 458
Query: 459 PKPVNV 464
P P +V
Sbjct: 459 PCPTSV 464
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 100/235 (42%), Gaps = 9/235 (3%)
Query: 199 IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGS 258
+D + A ++ YN ++ Y + + DE ++ +M + DV +Y +S+
Sbjct: 275 VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCK 334
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
G + +F+ M +K ++P+ TF+++ G++E A E L + R
Sbjct: 335 MGRLDDAYELFQQMVANK-LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY 393
Query: 319 PYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIF 375
Y+ ++ Y V K EE+ + R P Y+ +++ R G + +
Sbjct: 394 TYNCVVDGYCKSNQVRKAEELVADFR-SRGFVPNTVT--YNILVAGCCRAGRTDQALQYL 450
Query: 376 EEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
++ S +A +++ ++G D A F+ +I+ G P + ++ T+
Sbjct: 451 DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATV 505
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 128/343 (37%), Gaps = 54/343 (15%)
Query: 144 SDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV------YGALLNAYVRARMRGNAEL 197
SD++ ++ +H A L D ++DR + +L AR A
Sbjct: 8 SDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMA 67
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
L DKM + G H+ YN++ L K + DE ++ +MK +G+ +N+ +
Sbjct: 68 LFDKMAELGAVNHTTYYNLIHPL-CKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLC 126
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR---------- 307
G GV+ M + A P++ T++ + K G++ A + L+
Sbjct: 127 RAGRLRHALGVYRQM--NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDN 184
Query: 308 ------VESRITGRDRVPYHYLL-----------------SLYGSVGKKEEVYRVWNLY- 343
V+S G DRV L +L + K E + L
Sbjct: 185 TTLTVVVQSLCLG-DRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLL 243
Query: 344 -----RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYV 398
R P + Y +I L + G + IFEE ++ N ++ Y
Sbjct: 244 GEVTRRGFTPDIVT--YSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI---TYNSLIGGYC 298
Query: 399 KEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ G+ D+A ++++ P+ ++ TL + R+ +A
Sbjct: 299 RAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDA 341
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ Y ++ AE L+ R +G+ +++ YN+++ + D+ + ++
Sbjct: 395 YNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLN 454
Query: 239 EKG--IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+G V Y I L + G T+ +E M + + P TF+T+ K
Sbjct: 455 SEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM-IQRGYVPAAATFATVVFALCKAH 513
Query: 297 QVEKAEESL 305
Q ++A E L
Sbjct: 514 QPQQAHELL 522
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
MK +G DV SY+ ++ G +K+ + + M++ K + PN T++++ + K G
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQM-KGLKPNLYTYNSIILLLCKSG 59
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLG 354
+V+ AE LR + ++ D V Y L+ + +G + Y++++ + + P +
Sbjct: 60 KVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDF--IA 117
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y A+I L R G + +K+F + S D ++ Y K G +KA + N ++
Sbjct: 118 YTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV 177
Query: 415 EEGGKPNSTSWETLAEG 431
+ G PN ++ LA+G
Sbjct: 178 QSGLTPNVVTYTALADG 194
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 119/274 (43%), Gaps = 9/274 (3%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y ++N Y LI +M+ KG + YN ++ L K + D+
Sbjct: 8 PDVVS----YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
E ++ EM +GI D Y + G+ + +F+ M+ + V P++ ++ +
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIV-PDFIAYTAVI 122
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVF 347
+ G++ +A++ ++ SR D V Y L+ Y G+ E+ + + N + +
Sbjct: 123 CGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLT 182
Query: 348 PGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
P V Y A+ L ++G ++ ++ E + N +++ K GN +A
Sbjct: 183 PNVVT--YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ G P++ ++ TL + + + +++A
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKA 274
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 115/255 (45%), Gaps = 5/255 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ Y ++ A L ++M G + + Y + K+ + D ++
Sbjct: 149 DEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELL 208
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM KG++L++ +YN ++ G+ + + E M+V + P+ TF+T+ Y K
Sbjct: 209 HEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV-AGMYPDTITFTTLMDAYCK 267
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV--WNLYRSVFPGVTN 352
G++ KA E LR + R + ++ L++ + G E+ R+ W L + + P T
Sbjct: 268 TGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTT 327
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y++++ ++ +I++ + D N+++ + K N +A
Sbjct: 328 --YNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKE 385
Query: 413 IIEEGGKPNSTSWET 427
+ E+G ++S+ +
Sbjct: 386 MAEKGFNLTASSYNS 400
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 104/241 (43%), Gaps = 7/241 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y +L+N ++ A L+++M G ++ + +M Y K E + ++ EM
Sbjct: 222 TYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
++G++ V ++N+ ++ G E E + M ++K + PN TT++++ Y
Sbjct: 282 LDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWM-LEKGIMPNTTTYNSLMKQYCIRNN 340
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL---G 354
+ E + + +R D Y+ L+ + K + W L++ + NL
Sbjct: 341 MRCTTEIYKGMCARGVMPDSNTYNILIKGHC---KARNMKEAWFLHKEMAEKGFNLTASS 397
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+++I + I ++FEE + D I NL + EGN + A + I
Sbjct: 398 YNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAI 457
Query: 415 E 415
E
Sbjct: 458 E 458
>gi|414880641|tpg|DAA57772.1| TPA: hypothetical protein ZEAMMB73_835994 [Zea mays]
Length = 728
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 133/324 (41%), Gaps = 8/324 (2%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQL---DLIAKVHGVASAEDFFLSLPDTLKDRRVY 179
K A E + MN +G + A I + D + K + +E + + +Y
Sbjct: 329 KDAWEFFKRMNRKGVNWSFDVGAALINIFCSDGLKKEALIIQSE---MEKRGIASNTSIY 385
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
L+ AY ++ AE L +M++K + YN++M Y + + + VES++ EM++
Sbjct: 386 ETLMKAYCKSNQIEEAEGLFVEMKEKSLQATTTTYNILMDAYSRRLQTEVVESLLLEMQD 445
Query: 240 KGIRLDVYSYNIWLSSCGSQGS-TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
GIR SYN +S+ G Q + K E F MK D + P ++++ + Y G
Sbjct: 446 LGIRPSARSYNCLISAYGRQKKMSGKAENAFLRMKRD-GIKPLSSSYNALLFAYAANGLH 504
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
EKA ++ Y LL G E++ W G T + +H +
Sbjct: 505 EKAHAIYMDMKREGLKPTLETYTALLDTLRRAGDTEKLMETWKTMVDEKFGGTRVIFHMV 564
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I LA+ G + + E+ + N++M+ Y + G K +
Sbjct: 565 IDCLAKHGLYLQVRDVIYEFGKMGLKPTVMTYNILMNAYGRGGQHYKLPQLLKEMTALEL 624
Query: 419 KPNSTSWETLAEGHIRERRILEAL 442
KP+S ++ T+ + R R A
Sbjct: 625 KPDSITYCTMIYAYARVRDFSRAF 648
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 144/324 (44%), Gaps = 17/324 (5%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVA-SAEDFFLSLPDTLKDRR- 177
RRY A E+++ M + +AI L+++ K A A +FF + +R+
Sbjct: 290 RRYDGAWEIFELMEKNN--VQPDHGTSAIMLNIMKKSKVSAKDAWEFFKRM-----NRKG 342
Query: 178 ------VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
V AL+N + ++ A ++ +M +G A ++ Y +M Y K + +E E
Sbjct: 343 VNWSFDVGAALINIFCSDGLKKEALIIQSEMEKRGIASNTSIYETLMKAYCKSNQIEEAE 402
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+ EMKEK ++ +YNI + + + TE +E + M+ D + P+ +++ + +
Sbjct: 403 GLFVEMKEKSLQATTTTYNILMDAYSRRLQTEVVESLLLEMQ-DLGIRPSARSYNCLISA 461
Query: 292 YIKMGQVE-KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
Y + ++ KAE + R++ Y+ LL Y + G E+ + ++ +
Sbjct: 462 YGRQKKMSGKAENAFLRMKRDGIKPLSSSYNALLFAYAANGLHEKAHAIYMDMKREGLKP 521
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
T Y A++ +L R GD E + + ++ + K I ++++ K G + +
Sbjct: 522 TLETYTALLDTLRRAGDTEKLMETWKTMVDEKFGGTRVIFHMVIDCLAKHGLYLQVRDVI 581
Query: 411 NSIIEEGGKPNSTSWETLAEGHIR 434
+ G KP ++ L + R
Sbjct: 582 YEFGKMGLKPTVMTYNILMNAYGR 605
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 19/281 (6%)
Query: 169 LPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
LPD + Y L+N + A L+++M +KG +++ +N+M+ Y K + D
Sbjct: 345 LPDVVS----YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFEL----MKVDKAVNPNWT 283
+ + +++M+E G D +YN ++ C + E + E+ MK+D
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSV------ 454
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
T +T+ + ++E+A + L R D V Y L+ Y G + ++W+
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
Query: 344 --RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ + P + + Y+ +I L + G E E L D N ++ Y +EG
Sbjct: 515 KEKEIIP--STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREG 572
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+ +KA F N ++E KP+ + L G E + +AL
Sbjct: 573 DVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKAL 613
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 117/269 (43%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L+N Y +A G A +D+M K + S+ N ++ + K+ +E ++
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S +++G +D SY + G+ ++ +++ MK +K + P+ T++ + +
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMK-EKEIIPSTVTYNCIIGGLCQ 535
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
G+ E+A L + D Y+ +L Y G E+ ++ N + S P V
Sbjct: 536 CGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV-- 593
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ ++ L G +E K+F W+S + D N +++ KEG D A +
Sbjct: 594 FTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ E+ P+ ++ + RI EA
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREA 682
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 133/327 (40%), Gaps = 9/327 (2%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQ--LDLIAKVHGVASAEDFFLSLPD--TLKDR 176
++K A+E + M ++ S + LD + K + A D + + L +R
Sbjct: 223 KFKDAVEFLNVMG----KYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNR 278
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y L+ Y + A +I+ M YN+++ +E + E
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDE 338
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M+ + DV SYN ++ C + + E M +K V PN T + M Y K G
Sbjct: 339 MENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS-EKGVKPNAVTHNIMVKWYCKEG 397
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+++ A ++ ++E D V Y+ L++ Y G E +R + + ++ +
Sbjct: 398 KMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
++ +L R +E K+ D ++ Y K+GN D+A ++ + E+
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517
Query: 417 GGKPNSTSWETLAEGHIRERRILEALS 443
P++ ++ + G + + +A+S
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAIS 544
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 118/272 (43%), Gaps = 1/272 (0%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
+ L D Y L+N A L D+M + + YN ++ ++ + E
Sbjct: 308 NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEA 367
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
++ EM EKG++ + ++NI + +G + M+ + +P+ T++T+
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME-ESGFSPDCVTYNTLIN 426
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
Y K G + +A ++ + + D V + +L K EE Y++ + R +
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI 486
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ Y +I + G+++ K+++E + N ++ + G ++A +
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
N ++E G P+ T++ T+ G+ RE + +A
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGDVEKAF 578
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 114/276 (41%), Gaps = 40/276 (14%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +L+ + G+A L+ M+ +G + YN+++ Y K+ E +++
Sbjct: 242 DNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVI 301
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M + + DV++YN+ ++ ++G E+ + + M+ K + P+ +++T+ ++
Sbjct: 302 ELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL-PDVVSYNTLINGCLE 360
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++ +A + L + + + V ++ ++ Y GK ++
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT--------------- 405
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNS 412
I ME+ S + P N +++ Y K GN +A +
Sbjct: 406 -------------ITKMEE---------SGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGA 448
+ + K +S + T+ RE+++ EA L A
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 7/270 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+YG L+ AYV+ A L+ M G YN ++ + K+ +E + ++ +M
Sbjct: 488 MYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM 547
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
EKGI+ + ++Y +++ G + E F+ M + + PN ++ + + +G
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM-LSSGIVPNNVIYTILIKGHCDVGN 606
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW--NLYRSVFPGVTNLGY 355
+A + + + + D Y ++ GK +E V+ L V P V Y
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV--FLY 664
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMS--WYVKEGNFDKAEAFFNSI 413
+++IS + GDIE ++++E L + + + N +++ Y K GN +A F+ +
Sbjct: 665 NSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEM 724
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALS 443
I +G P+ + L +G +E + +ALS
Sbjct: 725 ISKGISPDGYIYCILIDGCGKEGNLEKALS 754
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 154/356 (43%), Gaps = 12/356 (3%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGAL 182
AL + M +G + A A I ++K A FL T + D +Y +L
Sbjct: 610 ALSTFKCMLEKGLIPDIRAYSAIIHS--LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES--MVSEMKEK 240
++ + + A L D+M G + + YN ++ Y K + E+ + EM K
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISK 727
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
GI D Y Y I + CG +G+ EK +F + K+V + + F+++ + K G+V +
Sbjct: 728 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQ-QKSVG-SLSAFNSLIDSFCKHGKVIE 785
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW--NLYRSVFPGVTNLGYHAM 358
A E + + + V Y L+ YG EE +++ R++ P L Y ++
Sbjct: 786 ARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP--NTLTYTSL 843
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ S +IG+ M +F++ + + D +M S Y KEG +A N + EG
Sbjct: 844 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 903
Query: 419 KPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEE 474
K ++ L +E++I L L E + S + ++ F+K+ E+
Sbjct: 904 KLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNED 959
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 9/290 (3%)
Query: 162 AEDFFLSLPDTL--KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
A+ F S+P + +R Y AL++ +++ A + D+M +G ++ + YN M+
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
K E + S+ +EM GI D ++YN+ + K + MK K +
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK-LT 448
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE---EV 336
P+ T+S + + ++KA E L ++ + Y L+ Y + E E+
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508
Query: 337 YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
++ + V P + Y+ +I L R +E + + + + ++
Sbjct: 509 LKIM-IANGVLPDL--FCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINL 565
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
Y K G AE +F ++ G PN+ + L +GH +EALS K
Sbjct: 566 YSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFK 615
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 124/274 (45%), Gaps = 8/274 (2%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
L D Y L+ RA+ A++L+ M +KG ++ Y + LY K E E
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAE 576
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
+M GI + Y I + G+T + F+ M ++K + P+ +S +
Sbjct: 577 RYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCM-LEKGLIPDIRAYSAIIHS 635
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPG 349
K G+ ++A + D Y+ L+S + G E+ ++++ L+ + P
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695
Query: 350 VTNLGYHAMIS--SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAE 407
+ + Y+ +I+ + G++ K+F+E +S S D I +++ KEGN +KA
Sbjct: 696 I--VVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL 753
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ F+ ++ + +++ +L + + +++EA
Sbjct: 754 SLFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEA 786
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 106/236 (44%), Gaps = 7/236 (2%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN + + DE + M EKG+ D ++Y + + Q +++ + +FE M
Sbjct: 279 YNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMP 338
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+NPN T++ + +IK G + EE+LR + IT ++ ++ G + K
Sbjct: 339 -SSGLNPNRFTYTALIDGFIKEGNI---EEALRIKDEMITRGLKLNVVTYNAMIGGIAKA 394
Query: 334 EEVYRVWNLYRSVF-PGV--TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
E+ + +L+ + G+ Y+ +I + D+ ++ E + K + P
Sbjct: 395 GEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY 454
Query: 391 NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
++++S + KA + +I G KPN + TL + +++E R A+ LK
Sbjct: 455 SVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 118/266 (44%), Gaps = 5/266 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y A++ +A A L ++M G + YN+++ Y+K + + +++EMK
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ + ++Y++ +S +K V + M + V PN + T+ Y++ +
Sbjct: 444 ARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM-IRNGVKPNVFMYGTLIKAYVQESRY 502
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPGVTNLGYH 356
E A E L+ + + D Y+ L+ K EE + V + + P Y
Sbjct: 503 EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT--YG 560
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
A I+ ++ G+I+ E+ F++ LS + I +++ + GN +A + F ++E+
Sbjct: 561 AFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK 620
Query: 417 GGKPNSTSWETLAEGHIRERRILEAL 442
G P+ ++ + + + EA+
Sbjct: 621 GLIPDIRAYSAIIHSLSKNGKTKEAM 646
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 11/260 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+N A L+D+M ++G+ PY ++ K+ + + +++
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGDTESALNLL 64
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S+M+E I+ V YN + G + +F M DK + P+ T+S M + +
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH-DKGIFPDVITYSGMIDSFCR 123
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVT 351
G+ AE+ LR + R D V + L++ G V + EE+Y L R +FP T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDM-LRRGIFP--T 180
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y++MI + + +++ + S S D + +++ Y K D F
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 412 SIIEEGGKPNSTSWETLAEG 431
+ G N+ ++ TL G
Sbjct: 241 EMHRRGIVANTVTYTTLIHG 260
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 20/272 (7%)
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M E G R DV ++ ++ +G + L VD+ V + T+ KMG
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQ-----ALALVDRMVEEGHQPYGTIINGLCKMG 55
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVT 351
E A L ++E V Y+ ++ + K NL+ + +FP V
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIID---RLCKDGHHIHAQNLFTEMHDKGIFPDV- 111
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y MI S R G E++ + + + + D + +++ VKEG +AE +
Sbjct: 112 -ITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYG 170
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA- 470
++ G P + ++ ++ +G ++ R+ +A K + +KS P V
Sbjct: 171 DMLRRGIFPTTITYNSMIDGFCKQDRLNDA----KRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 471 CEEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
C+ + E F + R+ Y +LI
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/204 (18%), Positives = 96/204 (47%), Gaps = 3/204 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y A+++ + +A+ L +M DKG + Y+ M+ + + + + E ++ +M
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM 137
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
E+ I DV +++ +++ +G + E ++ M + + + P T+++M + K +
Sbjct: 138 IERQINPDVVTFSALINALVKEGKVSEAEEIYGDM-LRRGIFPTTITYNSMIDGFCKQDR 196
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFPGVTNLGYH 356
+ A+ L + S+ D V + L++ Y + + ++ ++R T + Y
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT-VTYT 255
Query: 357 AMISSLARIGDIEGMEKIFEEWLS 380
+I ++GD++ + + +S
Sbjct: 256 TLIHGFCQVGDLDAAQDLLNVMIS 279
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 5/231 (2%)
Query: 162 AEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMT 219
A++ F + D D Y +++++ R+ +AE L+ M ++ + ++ ++
Sbjct: 95 AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN 154
Query: 220 LYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN 279
+K + E E + +M +GI +YN + Q + + + M K+ +
Sbjct: 155 ALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSM-ASKSCS 213
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV 339
P+ TFST+ Y K +V+ E + R + V Y L+ + VG + +
Sbjct: 214 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 273
Query: 340 WNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA 390
N+ S + + +M++SL ++ I E+ KS PRI
Sbjct: 274 LNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ--KSEVCPRIV 322
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 140/323 (43%), Gaps = 25/323 (7%)
Query: 160 ASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
+ A++ F + + D Y +++ + + +AE L+ +M ++ + + YN +
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ ++K ++ E + EM +GI + +YN + Q + E +F LM K
Sbjct: 332 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT-KG 390
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
+P+ TF+T+ Y +++ E L + R + V Y+ L+ + VG
Sbjct: 391 CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAAL 450
Query: 338 RVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD--------- 386
+ + V P + + ++ L G ++ ++F+ K D
Sbjct: 451 DLSQQMISSGVCPDIVTC--NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVE 508
Query: 387 PRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSC 444
P + N+++ + EG F +AE + + G P++ ++ ++ +G ++ R+ EA
Sbjct: 509 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ- 567
Query: 445 LKGAFAAEGAKSWRPKPVNVINF 467
F + G+KS+ P NV+ F
Sbjct: 568 ---MFVSMGSKSFSP---NVVTF 584
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 18/282 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL+NA+V+ A L D+M +G +++ YN M+ + K D E M
Sbjct: 324 DVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF 383
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
M KG DV+++ + CG++ + ME + E+ + + + N T++T+ +
Sbjct: 384 YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR--RGLVANTVTYNTLIHGFC 441
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL----------- 342
+G + A + +++ S D V + LL GK ++ ++
Sbjct: 442 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 501
Query: 343 --YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
+ V P V L Y+ +I L G E+++EE D + M+ K+
Sbjct: 502 HPFNGVEPDV--LTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
D+A F S+ + PN ++ TL G+ + R+ + L
Sbjct: 560 SRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 601
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 93/207 (44%), Gaps = 8/207 (3%)
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
+M E R +V ++ ++ +G + + + M D + P T+ T+ K
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED-GLQPTQITYGTIVDGMCKK 232
Query: 296 GQVEKAEESLRRVE--SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVT 351
G A LR++E S I + V Y ++ G+ + ++ + +FP +
Sbjct: 233 GDTVSALNLLRKMEEVSHII-PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL- 290
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
Y++MI G E++ +E L K S D N +++ +VKEG F +A ++
Sbjct: 291 -FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYD 349
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRI 438
++ G PN+ ++ ++ +G ++ R+
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQDRL 376
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/338 (18%), Positives = 127/338 (37%), Gaps = 52/338 (15%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSL 169
++ K ++ A E+YD M RG ++ I D K + +AED F ++
Sbjct: 331 LINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMI--DGFCKQDRLDAAEDMFYLMAT 388
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D + L++ Y A+ + L+ +M +G +++ YN ++ + + + +
Sbjct: 389 KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNA 448
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK----------AVN 279
+ +M G+ D+ + N L G + +F+ M+ K V
Sbjct: 449 ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVE 508
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS-------------L 326
P+ T++ + I G+ +AEE + R D + Y ++ +
Sbjct: 509 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLG-----------------------YHAMISSLA 363
+ S+G K V + ++ G G Y +I
Sbjct: 569 FVSMGSKSFSPNVVT-FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 627
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDP-RIANLMMSWYVKE 400
++G+I G IF+E +S D I N++ ++ KE
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKE 665
>gi|297791025|ref|XP_002863397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309232|gb|EFH39656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 2/250 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+ D Y A+L+ Y + R L ++ G+ ++ ++V+ ++ + +YD +
Sbjct: 253 MPDEVTYSAILDVYSKLRKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRY 312
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
++ EMK ++ +V YN L + G G +F M ++ + PN T + + +Y
Sbjct: 313 VLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM-LEAGLTPNEKTLTALVKIY 371
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVT 351
K + A + ++++ D + Y+ LL++ +G +EE R++N + SV
Sbjct: 372 GKARWAKDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCKPD 431
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
N Y AM++ G E K+FEE L + ++ K D F+
Sbjct: 432 NFSYTAMLNIYGSGGKAEKAMKLFEEMLEAGVQVNVMGCTCLVQCLGKAKRIDDLVYVFD 491
Query: 412 SIIEEGGKPN 421
I+ G KP+
Sbjct: 492 LSIQRGVKPD 501
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 123/319 (38%), Gaps = 61/319 (19%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRD--------------KGYAVHSLPYNVMMTLYMKI 224
+ +LL+ R NA L+++ +R+ + + ++ YNV M
Sbjct: 140 FLSLLDEIPHPPDRDNALLVLNSLREWQKTHTFFNWVKSKNLFPMETIFYNVTMKSLRFG 199
Query: 225 KEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTT 284
+++ +E M EM + G+ LD NI T
Sbjct: 200 RQFYLIEEMALEMVKDGVELD----NI--------------------------------T 223
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR 344
+ST+ T + +KA E R+ D V Y +L +Y + K EEV ++ R
Sbjct: 224 YSTIITCAKRCNFYDKAIEWFERMYKTGLMPDEVTYSAILDVYSKLRKVEEVLSLYE--R 281
Query: 345 SVFPG--VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN 402
+V G + + + GD +G+ + +E S+ + + N ++ + G
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 403 FDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
A + FN ++E G PN + L + + + R +AL + AK W P+
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWAKDALQ----LWEEMKAKKW---PM 394
Query: 463 NVINFFKACEEESDMGSKE 481
+ I + +D+G +E
Sbjct: 395 DFILYNTLLNMCADIGLEE 413
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 122/269 (45%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL++ Y + A L ++M G + + Y + K E D ++
Sbjct: 284 DEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELL 343
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM KG++L++ +YN ++ G+ + + E MK + ++P+ T++T+ Y K
Sbjct: 344 HEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK-EAGLHPDTITYTTLMDAYYK 402
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV--WNLYRSVFPGVTN 352
G++ KA E LR + R V ++ L++ GK E+ R+ W L + + P
Sbjct: 403 TGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAAT 462
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y++++ ++ +I+ + D N+++ + K N +A
Sbjct: 463 --YNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKE 520
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
++E+ ++S+ L +G + +++LEA
Sbjct: 521 MVEKRFNLTASSYNALIKGFFKRKKLLEA 549
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 122/267 (45%), Gaps = 7/267 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+N+ R A L+ +M KG + Y ++ Y + E +V +V EM+
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172
Query: 239 EKGIRLDVYSY-NIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
KG++ ++Y+Y +I L C S E + + E+MK + V P+ ++T+ + K+G
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMK--RGVFPDHVIYTTLIDGFCKLGN 230
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGY 355
+ A + +E+R D + + L+ GK E +++N + + P + Y
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEP--DEVTY 288
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
A+I ++G+++ + + + + + + + K G D A + +
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCR 348
Query: 416 EGGKPNSTSWETLAEGHIRERRILEAL 442
+G + N +++ T+ G + IL+A+
Sbjct: 349 KGLQLNISTYNTIVNGLCKAGNILQAV 375
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 105/241 (43%), Gaps = 7/241 (2%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y ++N +A A L+++M++ G ++ Y +M Y K E + ++ EM
Sbjct: 358 YNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREML 417
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
++G++ V ++N+ ++ G E E + + M ++K + PN T++++ Y +
Sbjct: 418 DRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWM-LEKGIMPNAATYNSIMKQYCIRNNM 476
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL---GY 355
+ E R + ++ D Y+ L+ + K + W L++ + NL Y
Sbjct: 477 RISTEIYRGMCAQGVVPDSNTYNILIKGH---CKARNMKEAWFLHKEMVEKRFNLTASSY 533
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+A+I + + ++FEE I NL + +EGN + + IE
Sbjct: 534 NALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIE 593
Query: 416 E 416
+
Sbjct: 594 K 594
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 112/279 (40%), Gaps = 45/279 (16%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
E LI +D G H ++V + ++ +E ++ G+ L S N++L+
Sbjct: 25 VERLIYTYKDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLT 82
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTT--FSTMATMYIKMGQVEKAEESLRRVESRI 312
S+ M V ++ + W T ++ + ++G++ +A L R+E +
Sbjct: 83 CLSSKRDMLGM--VLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKG 140
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVW----------NLY------------------- 343
D V Y ++ Y VG+ ++V ++ NLY
Sbjct: 141 CIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGE 200
Query: 344 --------RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMS 395
R VFP ++ Y +I ++G+ + K+F E + + D + ++
Sbjct: 201 KVLREMMKRGVFP--DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALIC 258
Query: 396 WYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
G +A+ FN +I++G +P+ ++ L +G+ +
Sbjct: 259 GLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCK 297
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 117/278 (42%), Gaps = 27/278 (9%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP----YNVMMTLYMKIKEYDEVESM 233
VY L++ Y R GN L + + DK V+ LP YN ++ K+ +E
Sbjct: 469 VYAPLISGYCR---EGNVSLACE-IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
++M+E+G+ + ++Y+ + G E E + + M +D + PN + + Y
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM-LDTGLKPNDVIYIDLLESYF 583
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K +EK + + + + D Y L+ S G E +RV + G+
Sbjct: 584 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS-------GIEKN 636
Query: 354 G-------YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFD 404
G Y ++IS L + D E I +E K DP I N ++ K G+
Sbjct: 637 GSVPDVHVYSSLISGLCKTADREKAFGILDEM--SKKGVDPNIVCYNALIDGLCKSGDIS 694
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
A FNSI+ +G PN ++ +L +G + I A
Sbjct: 695 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 732
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 140/341 (41%), Gaps = 12/341 (3%)
Query: 153 IAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVH 210
++KV V + +F + + L + Y L++ Y++ +AE L+ +M D G +
Sbjct: 512 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 571
Query: 211 SLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFE 270
+ Y ++ Y K + ++V S M ++G+ LD Y I + + S G+ E V
Sbjct: 572 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 631
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
++ + +V P+ +S++ + K EKA L + + + V Y+ L+
Sbjct: 632 GIEKNGSV-PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 690
Query: 331 GKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
G V+N L + + P Y ++I ++GDI ++ E L+ + D
Sbjct: 691 GDISYARNVFNSILAKGLVPNCVT--YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 748
Query: 389 IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGA 448
+ +++ + G+ ++A + G + +S+ L +G + ++ E L L
Sbjct: 749 VYSVLTTGCSSAGDLEQAMFLIEEMFLR-GHASISSFNNLVDGFCKRGKMQETLKLLHVI 807
Query: 449 FAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ 489
+ P + + N E + L+Q
Sbjct: 808 M----GRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQ 844
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 106/245 (43%), Gaps = 5/245 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
++ Y L+ + A LL+ +M + ++ YN+++ + + + ++
Sbjct: 361 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLL 420
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM+ GI +VY+Y+I + G EK + E M K + PN ++ + + Y +
Sbjct: 421 SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT-KGLKPNAFVYAPLISGYCR 479
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTN 352
G V A E ++ D Y+ L+ VG+ EE + + R + P
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP--NE 537
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y +I + GD+E E++ + L + I ++ Y K + +K + F S
Sbjct: 538 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 597
Query: 413 IIEEG 417
++++G
Sbjct: 598 MLDQG 602
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 128/300 (42%), Gaps = 34/300 (11%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
R +G+ L AY + R A+ ++ +MR++G ++++ YNV++ + +E
Sbjct: 222 RGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKK 281
Query: 236 EMKEKGIRLDVYSYNIWLSS-CGSQGSTEK----------------------MEG----- 267
+M++ G+ D ++Y ++ C S+ S E ++G
Sbjct: 282 DMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREG 341
Query: 268 ----VFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
F+++K V V PN T+ + KMGQ+++A L+++ D + Y+
Sbjct: 342 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 401
Query: 322 YLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSV 381
++ + K++ +R+ + + Y MI L + G+ E + EE +
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 461
Query: 382 KSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ + ++S Y +EGN A F+ + + P+ + +L G + R+ E+
Sbjct: 462 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 521
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 135/321 (42%), Gaps = 45/321 (14%)
Query: 163 EDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM 222
ED+ L +PD YGAL+N ++R A+ L+D+M + + Y ++ +M
Sbjct: 284 EDYGL-VPDGF----TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFM 338
Query: 223 KIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK------------------ 264
+ DE M+ EM G++ + +Y+ + G ++
Sbjct: 339 REGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTI 398
Query: 265 -----MEGVFE----------LMKVDKA-VNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
+EG F L +++ A ++PN T+S M + G+ EKA + L +
Sbjct: 399 TYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM 458
Query: 309 ESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARI 365
++ + Y L+S Y G+V E++ +V P + Y+++I L+++
Sbjct: 459 TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV-NVLPDL--YCYNSLIFGLSKV 515
Query: 366 GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
G +E K F + + + ++ Y+K G+ + AE +++ G KPN +
Sbjct: 516 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 575
Query: 426 ETLAEGHIRERRILEALSCLK 446
L E + + I + S K
Sbjct: 576 IDLLESYFKSDDIEKVSSTFK 596
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 122/299 (40%), Gaps = 32/299 (10%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
++ D VY +L++ + R A ++D+M KG + + YN ++ K +
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 697
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATM 291
++ + + KG+ + +Y + G ++ M + + P+ +S + T
Sbjct: 698 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEM-LATGITPDAFVYSVLTTG 756
Query: 292 YIKMGQVEKA----EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RS 345
G +E+A EE R + I+ ++ L+ + GK +E ++ ++ R
Sbjct: 757 CSSAGDLEQAMFLIEEMFLRGHASISS-----FNNLVDGFCKRGKMQETLKLLHVIMGRG 811
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR----------------- 388
+ P L +IS L+ G + + IF E S R
Sbjct: 812 LVPNA--LTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 869
Query: 389 -IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
+ + M+ + KEGN DKA + I+ + +S+ + + R+ ++ EAL+ LK
Sbjct: 870 DVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLK 928
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 121/269 (44%), Gaps = 5/269 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + + L+ ++ A + ++M G ++ NV++ Y K +EV S +
Sbjct: 245 DEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFI 304
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM +G R D +++N ++ G + + ++M + + +P+ T++++ K
Sbjct: 305 DEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM-LQEGFDPDIFTYNSLIFGLCK 363
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTN 352
+G+VE+A E L ++ R + V Y+ L+S + EE + + S + P V
Sbjct: 364 LGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 423
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
++++I L + ++FEE + D N+++ G ++A +
Sbjct: 424 --FNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKE 481
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ G N ++ TL +G + +RI EA
Sbjct: 482 MESSGCSRNVVTYNTLIDGFCKNKRIEEA 510
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 146/350 (41%), Gaps = 42/350 (12%)
Query: 92 SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD 151
S +++ G ++ +V L + KHALE+ D M G D
Sbjct: 302 SFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG-------------FD 348
Query: 152 LIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHS 211
PD Y +L+ + A ++++M + ++ ++
Sbjct: 349 ------------------PDIF----TYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNT 386
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFE 270
+ YN +++ K + +E + + KGI DV ++N + C + ME +FE
Sbjct: 387 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAME-LFE 445
Query: 271 LMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSV 330
MK K +P+ T++ + G++E+A L+ +ES R+ V Y+ L+ +
Sbjct: 446 EMKT-KGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKN 504
Query: 331 GKKEEVYRVWNLYRSVFPGVTN--LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
+ EE +++ G++ + Y+ +I L + +E ++ ++ L D
Sbjct: 505 KRIEEAEEIFDEME--LQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKF 562
Query: 389 IANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
N +++++ + G+ KA ++ G +P+S ++ TL G + R+
Sbjct: 563 TYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRV 612
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 111/259 (42%), Gaps = 1/259 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D + +L+ A L ++M+ KG YN+++ +E S
Sbjct: 418 LPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALS 477
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
++ EM+ G +V +YN + E+ E +F+ M++ + ++ N T++T+
Sbjct: 478 LLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMEL-QGISRNVVTYNTLIDGL 536
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K +VE+A + + ++ D+ Y+ LL+ + G ++ + S +
Sbjct: 537 CKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDS 596
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ Y +I L++ G +E ++ P+ N ++ +E +A F
Sbjct: 597 VTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFRE 656
Query: 413 IIEEGGKPNSTSWETLAEG 431
++E+G P++ +++ + G
Sbjct: 657 MMEKGDPPDAVTYKVVFRG 675
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 10/262 (3%)
Query: 175 DRRVYGALLNAYV-RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
D Y L+++ R R+ A L+ +M G + + + YN ++ + K K +E E +
Sbjct: 455 DEFTYNMLIDSLCSRGRLE-EALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEI 513
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
EM+ +GI +V +YN + E+ + + M ++ + P+ T++++ T +
Sbjct: 514 FDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLME-GLKPDKFTYNSLLTYFC 572
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYL---LSLYGSVGKKEEVYRVWNLYRSVFPGV 350
+ G ++KA + ++ + S D V Y L LS G V + R L V
Sbjct: 573 RAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQ 632
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN-FDKAEAF 409
T Y+ +I +L R ++F E + D ++ G +A F
Sbjct: 633 T---YNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDF 689
Query: 410 FNSIIEEGGKPNSTSWETLAEG 431
+ ++G P+ +S+ LAEG
Sbjct: 690 LVEMTDKGFLPDFSSFLMLAEG 711
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 128/310 (41%), Gaps = 41/310 (13%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
P+ + +Y +L + G+ ++ +M+ G + + +++ Y K + +DE
Sbjct: 99 PNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDE 158
Query: 230 VESMVSEMKEK-GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
++V M+E+ G++LD ++YN L+ G+ K+ + V + + P+ TTF+ +
Sbjct: 159 AVAVVDIMEEEFGLKLDAFTYNFLLNVL-VDGNKLKLVEIVNSRMVSRGIKPDVTTFNIL 217
Query: 289 ATMYIKMGQVEKA----EE----------------------------SLRRVESRITG-- 314
+ Q+ A EE +LR E +
Sbjct: 218 IKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGC 277
Query: 315 -RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEK 373
V + L+ Y G+ EEV + + ++++++ L RIG ++ +
Sbjct: 278 PSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALE 337
Query: 374 IFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
I + L + +DP I N ++ K G ++A N +I PN+ ++ TL
Sbjct: 338 ILDVML--QEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIST 395
Query: 432 HIRERRILEA 441
+E ++ EA
Sbjct: 396 LCKENQVEEA 405
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 136/295 (46%), Gaps = 14/295 (4%)
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLP--DTLKDRRVYGALLNAYVRARMRGNAELL 198
L + I +D+ ++ V A+ F SL D + Y +L Y A + G A L
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 199 IDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGS 258
M+ K + + YN M+ +Y K E+++ ++V EM+ +GI + +Y+ +S G
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGK 447
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
G ++ +F+ ++ V + + TM Y ++G + A +R+ + D +
Sbjct: 448 AGKLDRAATLFQKLR-SSGVEIDQVLYQTMIVAYERVGLMGHA----KRLLHELKLPDNI 502
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG--VTNLG-YHAMISSLARIGDIEGMEKIF 375
P +++ G+ EE W ++R F V ++ + MI+ +R + ++F
Sbjct: 503 PRETAITILAKAGRTEEA--TW-VFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVF 559
Query: 376 EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK-PNSTSWETLA 429
E+ + D + ++++ Y K+ F+KA+ + + EEG P+ ++ L+
Sbjct: 560 EKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLS 614
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 144/334 (43%), Gaps = 19/334 (5%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y +++N Y +A++ A LLI +M + G +++ Y+ ++++Y++ ++ E S+
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF 318
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVF-ELMKVDKAVNPNWTTFSTMATMYI 293
+EMKE LD+ + NI + G ++ + +F L K+D + PN +++T+ +Y
Sbjct: 319 AEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD--IEPNVVSYNTILRVYG 376
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+ +A R ++ + ++ V Y+ ++ +YG + E+ + +S +
Sbjct: 377 EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 436
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +IS + G ++ +F++ S D + M+ Y + G A+ + +
Sbjct: 437 TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496
Query: 414 IEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK------------SWRPKP 461
P T+ LA+ R EA + AF + K S +
Sbjct: 497 KLPDNIPRETAITILAKAG----RTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRY 552
Query: 462 VNVINFFKACEEESDMGSKEAFVALLRQPGYRKE 495
VNVI F+ +L G ++E
Sbjct: 553 VNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQRE 586
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 140/324 (43%), Gaps = 33/324 (10%)
Query: 114 KELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLD-LIAKVHGVASAEDFFLSLPDT 172
+ LRK RRY+ R + D + +D L+A +H + ++ F SL T
Sbjct: 72 QALRKHRRYQ----------------RSAFLDHNVDMDELLASIHQTQNEKELF-SLLST 114
Query: 173 LKDRRVYGALLNAYVRARMRGNAEL-LIDKMRDKG-YAVHSLPYNVMMTLYMKIKEYDEV 230
KDR++ + + + L L+D + ++ Y YNV++ ++ K++D
Sbjct: 115 YKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIA 174
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
+ EM+++ + D Y+Y+ ++S G +G + + M+ D+ V+ + +S +
Sbjct: 175 HGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDR-VSGDLVLYSNLIE 233
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY------R 344
+ ++ KA R++ D V Y+ ++++YG K +++R L
Sbjct: 234 LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG----KAKLFREARLLIKEMNEA 289
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
V P + Y ++S +F E V + D N+M+ Y +
Sbjct: 290 GVLPN--TVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVK 347
Query: 405 KAEAFFNSIIEEGGKPNSTSWETL 428
+A+ F S+ + +PN S+ T+
Sbjct: 348 EADRLFWSLRKMDIEPNVVSYNTI 371
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
+KD V+G ++N Y R + N + +KMR GY S +++ Y K +E+++ ++
Sbjct: 533 VKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADT 592
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM+E+G + LS S+ E +E +F+ ++ D VN +A +Y
Sbjct: 593 VYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHL-VVAALY 651
Query: 293 IKMGQVEKAEESLRRVESR 311
+ ++ A + R+ R
Sbjct: 652 ERADKLNDASRVMNRMRER 670
>gi|449443726|ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 456
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 119/266 (44%), Gaps = 6/266 (2%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD D Y L+ + ++ A+ L+ M +G +++ YN + Y K K + E
Sbjct: 165 PDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAE 224
Query: 230 VESMVSEM-KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+ES++ +M + G + DV++ N L + G G E ME +E + + + P+ TF+ +
Sbjct: 225 MESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQ-EAGIQPSIQTFNIL 283
Query: 289 ATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--V 346
Y K EK + ++ V Y+ ++ +G G +++ ++ L RS +
Sbjct: 284 LDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERI 343
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
P L +++ + + G E ++ + + D N ++ Y + F +
Sbjct: 344 KPSCVTLC--SLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLECFAEM 401
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGH 432
+ + + G KP+ T++ T+A +
Sbjct: 402 KKVLGMMEQRGCKPDKTTYRTMARAY 427
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 130/287 (45%), Gaps = 15/287 (5%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMR---DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
Y ALL+AY R+ + A ++++M+ D VH+ Y++++ +++ +++ ++++S
Sbjct: 138 YTALLSAYSRSGLLDEAFSILNEMKNSPDCQPDVHT--YSILIKSCLQVFAFNKAQTLLS 195
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN-WTTFSTMATMYIK 294
+M +GI+ + +YN ++ + G +ME + M D P+ WT ST+ + +
Sbjct: 196 DMVTRGIKPNTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRA-FGR 254
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
GQ+E E+ + + ++ LL YG E++ V + T +
Sbjct: 255 SGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVT 314
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNS 412
Y+ +I + R G+++ ME +F L P L ++ Y + G +K ++ N
Sbjct: 315 YNIVIDAFGRAGNLKQMEHLFR--LMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNL 372
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
+ ++ + L + + R LE + +K + +P
Sbjct: 373 VENSDIMLDTVFYNCLVDAYGR----LECFAEMKKVLGMMEQRGCKP 415
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 109/257 (42%), Gaps = 3/257 (1%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+Y L+ + + + A L +M ++G V Y +++ Y + DE S+++EM
Sbjct: 102 MYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEM 161
Query: 238 KEK-GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
K + DV++Y+I + SC + K + + M V + + PN T++T Y K
Sbjct: 162 KNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDM-VTRGIKPNTITYNTFIDAYGKAK 220
Query: 297 QVEKAEESLRRVESRITGRDRV-PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
+ E L + + + V + L +G G+ E + + + ++ + +
Sbjct: 221 MFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTF 280
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ ++ S + E M + E S+ N+++ + + GN + E F +
Sbjct: 281 NILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRS 340
Query: 416 EGGKPNSTSWETLAEGH 432
E KP+ + +L +
Sbjct: 341 ERIKPSCVTLCSLVRAY 357
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 122/310 (39%), Gaps = 27/310 (8%)
Query: 196 ELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSS 255
ELL +++ + YA + VM+ K K+ ++ + EM E+G + SY LS+
Sbjct: 88 ELLREQLWYRPYAGMYIKLIVMLG---KCKQQEKAYELFQEMIEEGCEVSHESYTALLSA 144
Query: 256 CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGR 315
G ++ + MK P+ T+S + +++ KA+ L + +R
Sbjct: 145 YSRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKP 204
Query: 316 DRVPYHYLLSLYGSVGKKEEVYRVW-NLYR--SVFPGVTNLGYHAMISSLARIGDIEGME 372
+ + Y+ + YG E+ + ++ P V + ++ + + R G +E ME
Sbjct: 205 NTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTM--NSTLRAFGRSGQLETME 262
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF---------------FNSIIEEG 417
K +E++ + N+++ Y K +++K A +N +I+
Sbjct: 263 KCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAF 322
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDM 477
G+ + +R RI + L A G R K +V+N E SD+
Sbjct: 323 GRAGNLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLV----ENSDI 378
Query: 478 GSKEAFVALL 487
F L
Sbjct: 379 MLDTVFYNCL 388
>gi|410110061|gb|AFV61110.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia seriphioides]
Length = 416
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 156/345 (45%), Gaps = 13/345 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A++N + +A++ A LI +M+ G ++ Y+ ++T+Y++ K++ E S+
Sbjct: 80 DLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYSTLLTMYVENKKFLEALSVF 139
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM+E LD+ + NI + G G ++ + +F M+ + PN +++T+ +Y
Sbjct: 140 SEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR-KMGIEPNVVSYNTLLRVYGD 198
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+A R ++ + ++ V Y+ ++ +YG + E+ + +S ++
Sbjct: 199 AELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSIT 258
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +IS ++G ++ +F++ S D + M+ Y + G A+ + +
Sbjct: 259 YSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK 318
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK--SWRPKPVNVINFFKACE 472
P T+ LA RI EA + A A K + + +++++ +K
Sbjct: 319 RPDNIPRDTAIHILAGAG----RIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYA 374
Query: 473 EESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKND 517
++ K +R GY + D ++L+ + E +K ND
Sbjct: 375 NVVEVFDK------MRGLGYFPDSDVIALVLNAYGKLHEFDKAND 413
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 83/195 (42%), Gaps = 5/195 (2%)
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM+++ + D Y+Y+ ++ G +G + + M+ D+ V + +S + + K+
Sbjct: 1 EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDR-VPGDLVLYSNLIELSRKL 59
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNL 353
KA R++ D V Y+ +++++G E + + + V P +
Sbjct: 60 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTAS- 118
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
Y +++ +F E VK D N+M+ Y + G +A+ F +
Sbjct: 119 -YSTLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 177
Query: 414 IEEGGKPNSTSWETL 428
+ G +PN S+ TL
Sbjct: 178 RKMGIEPNVVSYNTL 192
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 153/346 (44%), Gaps = 30/346 (8%)
Query: 150 LDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
++ + K + A +FF + + + R Y L++ + R + A ++++M + G+
Sbjct: 361 INSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 420
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ + YN + + ++ +E +V EM EKG+ DV SY+ +S +G ++
Sbjct: 421 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDR--- 477
Query: 268 VFELMK--VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLS 325
F++ + V+K V+P+ T+S++ +M ++ +A + + + D Y L++
Sbjct: 478 AFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLIN 537
Query: 326 LYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSL---ARIGDIEGM--EKIFEEW 378
Y G + + + +++ P Y +I+ L AR + + + + I+EE
Sbjct: 538 AYCVEGDLNKALHLHDEMIHKGFLPDAVT--YSVLINGLNKQARTREAKRLLFKLIYEES 595
Query: 379 LSVKSSYDPRIANL----------MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
+ +YD I N ++ + +G +A+ F S++E KP + +
Sbjct: 596 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVI 655
Query: 429 AEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEE 474
GH R + +A + K + + P V VI KA +E
Sbjct: 656 IHGHCRGGNLPKAFNLYKEMIHS----GFVPHTVTVITLIKALFKE 697
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 5/271 (1%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L + Y L++AY + A L+ M KG + + YNV++ + E
Sbjct: 246 LPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWE 305
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
++ EM KG D +YN L+ +G+ + + M V V+P+ T++ +
Sbjct: 306 ILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM-VRNGVSPSVVTYTALINSM 364
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVF-PGV 350
K + +A E ++ R + Y L+ + G E YR+ N + S F P V
Sbjct: 365 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 424
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
Y+A I + +E + +E + + D + ++S + ++G D+A
Sbjct: 425 VT--YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMK 482
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++E+G P++ ++ +L +G RR+ EA
Sbjct: 483 QEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 513
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 122/272 (44%), Gaps = 7/272 (2%)
Query: 179 YGALLNAYVRAR--MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
Y ++L+A VR+R ++ +AE + +M + + YN+++ + + E + E
Sbjct: 180 YNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGE 239
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M+ G +V +YN + + G ++ G+ + M K + PN +++ + + G
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS-SKGMQPNLISYNVIINGLCREG 298
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE--VYRVWNLYRSVFPGVTNLG 354
+++A E L + + D V Y+ LL+ Y G + V + V P V
Sbjct: 299 SMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVT-- 356
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y A+I+S+ + ++ + F++ + R ++ + ++G ++A N +
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
E G P+ ++ GH R+ EAL ++
Sbjct: 417 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 448
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 132/339 (38%), Gaps = 63/339 (18%)
Query: 110 CRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL 169
C + L +F+ YK A + LSASD S F L
Sbjct: 93 CLSLHILTRFKLYKTA-------QTLAQELALSASDP--------------SGSSIFQCL 131
Query: 170 PDTL----KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
D+ V+ ++ +Y M A I+ + G+ L YN ++ ++ +
Sbjct: 132 KDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSR 191
Query: 226 EYDEV--ESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWT 283
++ E + EM + +VY+YNI + S G +K G F M+ + + PN
Sbjct: 192 GSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCL-PNVV 250
Query: 284 TFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY 343
T++T+ Y KMG++++A L+ + S+ G + +
Sbjct: 251 TYNTLIDAYCKMGRIDEAFGLLKSMSSK-------------------GMQPNL------- 284
Query: 344 RSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNF 403
+ Y+ +I+ L R G ++ +I EE + D N +++ Y KEGNF
Sbjct: 285 ---------ISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 335
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+A ++ G P+ ++ L + R + A+
Sbjct: 336 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 24/221 (10%)
Query: 251 IWLSSCGSQGSTEKMEGVFELMKVDKAV-NPNWTTFSTMATMYIKMGQVEKAEESLRRVE 309
+ LS+ GS+ +F+ +K V N + F M Y + +++A ++ +
Sbjct: 115 LALSASDPSGSS-----IFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAK 169
Query: 310 SRITGRDRVPYHYLLSLY----GSVG-KKEEVYRVWNLYRS-VFPGVTNLGYHAMISSLA 363
S + Y+ +L GSV EEVYR + RS V P V Y+ +I
Sbjct: 170 SSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR--EMIRSRVSPNVYT--YNILIRGFC 225
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
+G+++ F E ++ P + N ++ Y K G D+A S+ +G +PN
Sbjct: 226 SVGELQKGLGCFGEM--ERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPN 283
Query: 422 STSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPV 462
S+ + G RE + EA L+ G K + P V
Sbjct: 284 LISYNVIINGLCREGSMKEAWEILE----EMGYKGFTPDEV 320
>gi|9755842|emb|CAC01928.1| 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana]
Length = 702
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 116/227 (51%), Gaps = 20/227 (8%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK------DRRV 178
AL +YD R E++R+ A + + +++GV+ D L++ + +K + +
Sbjct: 264 ALSLYD--RARTEKWRIDA----VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVI 317
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+++ RA+ A+++ + G+ + Y ++ Y + + D+ ++ EMK
Sbjct: 318 YNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMK 377
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG+ L V YN LS C G ++ +F+ MK + +P+ TFS++ T+Y G+V
Sbjct: 378 EKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRV 437
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLS----LYGSVGKKEEVYRVWN 341
+AE +L ++ R G + P ++L+ YG + ++V R ++
Sbjct: 438 SEAEAAL--LQMREAGFE--PTLFVLTSVIQCYGKAKQVDDVVRTFD 480
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 163/375 (43%), Gaps = 27/375 (7%)
Query: 57 IHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWE--KGGRSLTKWELCRVVK 114
I +G FE+ ++ N M NP+ + N E K R + + + +K
Sbjct: 133 ITGFGGKLFEQDAVVTLNN-------MTNPETAPLVLNNLLETMKPSREVILYNV--TMK 183
Query: 115 ELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI--AKVHGVAS-AEDFF--LSL 169
RK + + + +++D M RG + D A +I A+ +GV A ++F +S
Sbjct: 184 VFRKSKDLEKSEKLFDEMLERGIK-----PDNATFTTIISCARQNGVPKRAVEWFEKMSS 238
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D A+++AY RA A L D+ R + + + ++ ++ ++ +Y YD
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 298
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ EMK G++ ++ YN + S G + + +++ + + PNW+T++ +
Sbjct: 299 CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL-ITNGFTPNWSTYAALV 357
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFP 348
Y + + A R ++ + + Y+ LLS+ +G +E + ++ ++
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETC 417
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKA 406
+ + ++I+ A G + E + ++ ++P + L ++ Y K D
Sbjct: 418 DPDSWTFSSLITVYACSGRVSEAEAALLQMR--EAGFEPTLFVLTSVIQCYGKAKQVDDV 475
Query: 407 EAFFNSIIEEGGKPN 421
F+ ++E G P+
Sbjct: 476 VRTFDQVLELGITPD 490
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 38/330 (11%)
Query: 150 LDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+D + K H V A D +S+ + VY AL++ + + A+++ KM ++GY
Sbjct: 643 VDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGY 702
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ Y+ ++ K K D ++S M E +V Y + G T++
Sbjct: 703 GPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYR 762
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ +M+ +K +PN T++ M + K G+V+K E +R++ ++ + V Y L++
Sbjct: 763 LMSMME-EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHC 821
Query: 328 GSVGKKEEVYRVWN------------LYRSVFPG-----VTNLG---------------- 354
+ G ++ +++ + YR V G + +LG
Sbjct: 822 CAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPA 881
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKS--SYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y +I S + G +E ++ +E S S + D + + ++ DKA +
Sbjct: 882 YRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYAD 941
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+I+ GG P + + L +G IR R EAL
Sbjct: 942 MIKRGGIPELSIFFYLVKGLIRINRWEEAL 971
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 141/368 (38%), Gaps = 32/368 (8%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y L++++ + + A D+M G A + + Y ++ Y+K ++
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV------------- 278
+ M +G +V +Y + G EK ++ M+ + +
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630
Query: 279 --NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
+PN T+ + K +V++A + L + + + Y L+ + VGK +E
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690
Query: 337 YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
V+ G Y ++I L + ++ K+ L + + I M+
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG 750
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS 456
K G D+A + + E+G PN ++ + +G + ++ + L ++ GAK
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMR----QMGAKG 806
Query: 457 WRPKPVNVINFFKACEEESDMGSKEAFVALLRQ-------PGYRK-----EKDYMSLIGL 504
P V C + + ++Q GYRK ++++ +GL
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGL 866
Query: 505 TDEAVAEN 512
DE +AEN
Sbjct: 867 LDE-IAEN 873
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 40/271 (14%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM-V 234
RR++ +L++AY R+ A L+ KM D G + YN+++ I +++ S+ V
Sbjct: 369 RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG---GICGNEKLPSLDV 425
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ EK +Y L D V N S +A
Sbjct: 426 LELAEK-------AYGEML---------------------DAHVVLNKVNVSNLARCLCG 457
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTN 352
G+ EKA +R + S+ D Y ++ L + K + + ++ +S V P V
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDV-- 515
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFF 410
Y +I S ++G ++ K F+E V+ P + ++ Y+K A F
Sbjct: 516 FTYTILIDSFCKVGLLQQARKWFDEM--VRDGCAPNVVTYTALIHAYLKARKMSSANELF 573
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++ EG PN ++ L +GH + +I +A
Sbjct: 574 EMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 112/265 (42%), Gaps = 19/265 (7%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
+I +M KG+ + Y+ ++ L + D + EMK + DV++Y I + S
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G ++ F+ M V PN T++ + Y+K ++ A E + S +
Sbjct: 527 KVGLLQQARKWFDEM-VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585
Query: 318 VPYHYLLSLYGSVGKKEEVYRVW------------NLYRSVFPGVTN----LGYHAMISS 361
V Y L+ + G+ E+ +++ ++Y + G Y A++
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
L + ++ + + +SV+ I + ++ + K G D+A+ F + E G P
Sbjct: 646 LCKAHKVKEARDLL-DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGP 704
Query: 421 NSTSWETLAEGHIRERRILEALSCL 445
N ++ +L + +++R+ AL L
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVL 729
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 53/304 (17%), Positives = 114/304 (37%), Gaps = 43/304 (14%)
Query: 163 EDFFLSLPDTLKDRRVYGALLNAYVRARMRG---NAELL-IDKMRDKGYAVHSLPYNVMM 218
E F + D +D+ + G LLN +R R N L + +++D GY L YN ++
Sbjct: 182 EQFLREIRD--EDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALV 239
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS----------------- 261
++++ D + EM + G +D Y+ ++ G
Sbjct: 240 RVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDT 299
Query: 262 ---TEKMEGVFELMKVDKAVN-----------PNWTTFSTMATMYIKMGQVEKAEESLRR 307
T+ + G+ E ++A++ PN T+ + ++ Q+ + + L
Sbjct: 300 VIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSM 359
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS------ 361
+ + R ++ L+ Y G Y++ + Y+ +I
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 419
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L + +E EK + E L + + + G F+KA + ++ +G P+
Sbjct: 420 LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPD 479
Query: 422 STSW 425
++++
Sbjct: 480 TSTY 483
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 137/321 (42%), Gaps = 9/321 (2%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLN 184
A +++D M RG F A A ++ + V A + F L D + AL+
Sbjct: 183 AQDLFDKMPLRG--FSQDAVSYAALIEGFCETGRVDEALELFRELEQ--PDMYTHAALVK 238
Query: 185 AYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRL 244
AR ++ KM++ G+ + Y ++ L+ + ++ +E E M++EM + G+
Sbjct: 239 GLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVP 298
Query: 245 DVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEES 304
+ +++ +G VFE MK+ K PN T++ M + +G+V KA
Sbjct: 299 CAVTCTAVVNAYCREGRMSGAVRVFESMKL-KGCEPNVWTYNAMVQGFCNVGKVYKAMAL 357
Query: 305 LRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLAR 364
L ++ D V Y+ L+ G E +R+ L Y+ +I +L +
Sbjct: 358 LDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCK 417
Query: 365 IGDIEGMEKIFE--EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNS 422
G ++ +F+ E+ ++ + N +++ K G FD A F ++ G P++
Sbjct: 418 TGKVDEACSLFDGLEYRGIRP--NSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDT 475
Query: 423 TSWETLAEGHIRERRILEALS 443
++ E + + E LS
Sbjct: 476 YTYSPFIENLCKTKGSREGLS 496
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 145/348 (41%), Gaps = 26/348 (7%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
R Y AL++ + R + AE ++++M D G ++ ++ Y + +
Sbjct: 266 RAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFES 325
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
MK KG +V++YN + + G K + + M+ + V P+ T++ + G
Sbjct: 326 MKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR-ECGVEPDVVTYNLLIRGQCIDG 384
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
+E A LR +E D+ Y+ L+ GK +E +++ YR + P ++
Sbjct: 385 HIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRP--NSVT 442
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKS-----SYDPRIANLMMSWYVKEGNFDKAEAF 409
++ +I+ L + G + E+ +S +Y P I NL + +EG +F
Sbjct: 443 FNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREG-----LSF 497
Query: 410 FNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFK 469
+ ++++ KP++ ++ + + +ER A + G + G P V +
Sbjct: 498 IDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATR-IWGQMVSLGCS---PDVVTYTTSVR 553
Query: 470 ACEEESDMGSKEAFVALLRQPG-------YRKEKDYMSLIGLTDEAVA 510
A E + E V +++ G Y D + IG TD AV
Sbjct: 554 AYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVT 601
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 126/303 (41%), Gaps = 40/303 (13%)
Query: 181 ALLNAYVR-ARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
A++NAY R RM G A + + M+ KG + YN M+ + + + + +++ +M+E
Sbjct: 305 AVVNAYCREGRMSG-AVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRE 363
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM-----------------------KVDK 276
G+ DV +YN+ + G E + LM KVD+
Sbjct: 364 CGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDE 423
Query: 277 A-----------VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH-YLL 324
A + PN TF+T+ K G+ + A L ++ S D Y ++
Sbjct: 424 ACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIE 483
Query: 325 SLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKS 383
+L + G +E + + L + V P N Y +I L + + +I+ + +S+
Sbjct: 484 NLCKTKGSREGLSFIDEMLQKDVKPSTVN--YTIVIDRLFKERNYGLATRIWGQMVSLGC 541
Query: 384 SYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALS 443
S D + Y EG +AE + + G ++ ++ TL +GH + A++
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVT 601
Query: 444 CLK 446
LK
Sbjct: 602 ILK 604
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 120/295 (40%), Gaps = 46/295 (15%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + +L+ Y R + A+ L DKM +G++ ++ Y ++ + + DE +
Sbjct: 163 DAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELF 222
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDK-AVNPNWTTFSTMATMYI 293
E+++ D+Y++ + G + EG++ L K+ + P ++ + ++
Sbjct: 223 RELEQP----DMYTHAALVK--GLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWC 276
Query: 294 KMGQVEKAEESLRRV---------------------ESRITGRDRV-------------- 318
+ + E+AE+ L + E R++G RV
Sbjct: 277 REQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVW 336
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHAMISSLARIGDIEGMEKIFE 376
Y+ ++ + +VGK + + + R V P V Y+ +I G IE ++
Sbjct: 337 TYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVT--YNLLIRGQCIDGHIESAFRLLR 394
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
+ D N+++ K G D+A + F+ + G +PNS ++ T+ G
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 126/313 (40%), Gaps = 18/313 (5%)
Query: 124 HALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALL 183
HAL+V W R+ + AA+ + G LP D Y L+
Sbjct: 165 HALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG----------LP---MDVVGYNTLV 211
Query: 184 NAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIR 243
+ RA A ++D M++ G + Y + Y + K +E + M G+
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271
Query: 244 LDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEE 303
LDV + + ++ G + +F M AV PN T+ T+ K G+ ++
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAV-PNHVTYCTLIDSLAKAGRGKELLS 330
Query: 304 SLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLA 363
L + SR D V Y L+ G GK +EV S + + Y +I +L
Sbjct: 331 LLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALC 390
Query: 364 RIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
+ +++ E++ E + S P + +++ +VK G DKA + + E G PN
Sbjct: 391 KAHNVDEAEQVLLEM--EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448
Query: 422 STSWETLAEGHIR 434
++ TL +G +
Sbjct: 449 VVTYGTLIDGFFK 461
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 4/243 (1%)
Query: 202 MRDKGYAVHSLP---YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGS 258
+ D+G +H+L +N ++ Y ++ + S+ M +G+ +DV YN ++
Sbjct: 157 LADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216
Query: 259 QGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRV 318
G + GV ++MK + V+PN T++ Y + VE+A + + D V
Sbjct: 217 AGQVDAARGVLDMMK-EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275
Query: 319 PYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
L++ G+ E Y ++ V ++ Y +I SLA+ G + + + E
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+S D +M W K+G D+ + + + N ++ L + + +
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNV 395
Query: 439 LEA 441
EA
Sbjct: 396 DEA 398
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 116/273 (42%), Gaps = 5/273 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ +A A ++ D+ ++ YNV + + ++ E +S++
Sbjct: 518 DHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSIL 577
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM+ G++ D +YN + S +G T K + MK+ ++ PN T++T+
Sbjct: 578 TEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM-SSIKPNLITYNTLVAGLFG 636
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRV--WNLYRSVFPGVTN 352
G VEKA+ L + S + + +L + + + + W + + +T
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITV 696
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ ++ L G + EE L + D N ++ + K + D A A +
Sbjct: 697 --YNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQ 754
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
++ + PN ++ TL G RI EA + L
Sbjct: 755 MLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 105/238 (44%), Gaps = 1/238 (0%)
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+++ + Y V++ K DE E ++ EM+EK I +V +++ ++ +G +K
Sbjct: 376 SLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+MK ++ +NPN T+ T+ + K + A E + ++ L++
Sbjct: 436 YKRMMK-ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGL 494
Query: 328 GSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP 387
GK EE ++ + ++ Y +I L + GD+ K +E + D
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554
Query: 388 RIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ N+ ++ G F +A++ + G KP+ +++ T+ H R+ +AL L
Sbjct: 555 VVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLL 612
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 110/255 (43%), Gaps = 7/255 (2%)
Query: 195 AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLS 254
A+ L+++M G++ SL + ++ + + D + + M G+ D+ YN L
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702
Query: 255 SCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
G T K V E M + + P+ TF+ + + K ++ A + ++ +
Sbjct: 703 VLCYHGMTRKATVVLEEM-LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNIS 761
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGD-IEGMEK 373
+ ++ LL SVG+ E V NL Y +++ + + +E M +
Sbjct: 762 PNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAM-R 820
Query: 374 IFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEG 431
++ E V + P+++ N ++S + K G +A+ F + + G P S +++ L G
Sbjct: 821 LYCEM--VGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Query: 432 HIRERRILEALSCLK 446
R R E CLK
Sbjct: 879 WSRIRNGTEVKKCLK 893
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 113/268 (42%), Gaps = 16/268 (5%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
ALL ++ R R+ A L+ R ++ YN+++ + ++ ++++EM ++
Sbjct: 78 ALLYSHCRLRLLRPAIALLRSSRPT-----TVAYNILLA---ALSDHAHAPAVLAEMCKR 129
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNP-NWTTFSTMATMYIKMGQVE 299
G+ D + N L+ G + + + A++ W +T+ Y ++G
Sbjct: 130 GVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGW---NTLIAGYCRVGDTP 186
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTNLGYHA 357
A R+ ++ D V Y+ L++ + G+ + V ++ + V P V Y
Sbjct: 187 AALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVAT--YTP 244
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
I R +E ++E + D + +++ ++G F +A A F + + G
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG 304
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCL 445
PN ++ TL + + R E LS L
Sbjct: 305 AVPNHVTYCTLIDSLAKAGRGKELLSLL 332
>gi|26452823|dbj|BAC43491.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 702
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 116/227 (51%), Gaps = 20/227 (8%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK------DRRV 178
AL +YD R E++R+ A + + +++GV+ D L++ + +K + +
Sbjct: 264 ALSLYD--RARTEKWRIDA----VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVI 317
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+++ RA+ A+++ + G+ + Y ++ Y + + D+ ++ EMK
Sbjct: 318 YNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMK 377
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG+ L V YN LS C G ++ +F+ MK + +P+ TFS++ T+Y G+V
Sbjct: 378 EKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRV 437
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLS----LYGSVGKKEEVYRVWN 341
+AE +L ++ R G + P ++L+ YG + ++V R ++
Sbjct: 438 SEAEAAL--LQMREAGFE--PTLFVLTSVIQCYGKAKQVDDVVRTFD 480
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 163/375 (43%), Gaps = 27/375 (7%)
Query: 57 IHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWE--KGGRSLTKWELCRVVK 114
I +G FE+ ++ N M NP+ + N E K R + + + +K
Sbjct: 133 ITGFGGKLFEQDAVVTLNN-------MTNPETAPLVLNNLLETMKPSREVILYNV--TMK 183
Query: 115 ELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI--AKVHGVAS-AEDFF--LSL 169
RK + + + +++D M RG + D A +I A+ +GV A ++F +S
Sbjct: 184 VFRKSKDLEKSEKLFDEMLERGIK-----PDNATFTTIISCARQNGVPKRAVEWFEKMSS 238
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D A+++AY RA A L D+ R + + + ++ ++ ++ +Y YD
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 298
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ EMK G++ ++ YN + S G + + +++ + + PNW+T++ +
Sbjct: 299 CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL-ITNGFTPNWSTYAALV 357
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFP 348
Y + + A R ++ + + Y+ LLS+ +G +E + ++ ++
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETC 417
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKA 406
+ + ++I+ A G + E + ++ ++P + L ++ Y K D
Sbjct: 418 DPDSWTFSSLITVYACSGRVSEAEAALLQMR--EAGFEPTLFVLTSVIQCYGKAKQVDDV 475
Query: 407 EAFFNSIIEEGGKPN 421
F+ ++E G P+
Sbjct: 476 VRTFDQVLELGITPD 490
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/421 (20%), Positives = 169/421 (40%), Gaps = 26/421 (6%)
Query: 30 CFTRLHQQSAIKHQRQKLPVIKCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLG 89
C+ L K Q K I ++ + H T D + + R + ++ QL
Sbjct: 167 CYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTED-------TYALLLR--AYCNSGQLH 217
Query: 90 SA-SVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI 148
A V+++ +K G T + L K R + A+EVY M + ER R + +
Sbjct: 218 RAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRM--KKERCRTNTETYTL 275
Query: 149 QLDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+++ K S+ F + + Y AL+NA+ R + AE + ++M+ G
Sbjct: 276 MINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 335
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
+ YN +M Y + + S M+ G D SYNI + + G G ++ E
Sbjct: 336 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAE 395
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
F+ +K + + P + + + + K G V + EE + ++ D + +L+
Sbjct: 396 AAFQELK-QQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNA 454
Query: 327 YGSVGKKEEVYRVWNLYR---------SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
YG G+ +++ R+ P + Y+ +++ R G ++ ME F
Sbjct: 455 YGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTST--YNVLVNVYGRAGYLDRMEAAFRA 512
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
+ + D + Y ++ + + F +++ G P++ + + L ER+
Sbjct: 513 LAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAKVLLAACSDERQ 572
Query: 438 I 438
+
Sbjct: 573 V 573
>gi|359480144|ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 164/379 (43%), Gaps = 20/379 (5%)
Query: 121 RYKHALEVYDWMNNRGERFRLSASDAAIQLD-LIAKVHGVASAEDFFLSLPD--TLKDRR 177
R++ AL+V++ + R + + S I+L ++ K A FL++ D + +
Sbjct: 117 RWESALKVFELL--REQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHE 174
Query: 178 VYGALLNAYVRARMRGNAELLIDKMR---DKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
Y ALL+AY R+ + A L++KM+ D VH+ Y+V++ +++ +D+V ++
Sbjct: 175 AYTALLSAYSRSGLFDKAFSLLEKMKNTPDCQPDVHT--YSVLIKSCLQVVAFDKVPVLL 232
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG-VFELMKVDKAVNPNWTTFSTMATMYI 293
S+M +GI+ + +YN + + G +ME + E+++ K WT ST+ +
Sbjct: 233 SDMANQGIKPNTVTYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRA-FG 291
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
GQ+E E+ + +S + ++ LL YG K E++ V + T +
Sbjct: 292 SSGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIV 351
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFFN 411
Y+ +I + R GD++ ME +F L P L ++ Y + G +K
Sbjct: 352 TYNVVIDAFGRAGDLKQMEYLFR--LMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLR 409
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKAC 471
I + + L + + R L + +KG K +P + KA
Sbjct: 410 FIENSDVMLDIVFFNCLVDAYGR----LGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAY 465
Query: 472 EEESDMGSKEAFVALLRQP 490
+ + L+R P
Sbjct: 466 KIGGMTSCAKELQGLMRMP 484
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 126/308 (40%), Gaps = 58/308 (18%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
AL++ + A L+ KM ++G+ + + YN +++ K + +E + EM ++
Sbjct: 496 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 555
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVN-----------PNWTTFSTMA 289
GI D ++YN+ + G+ + K+D+AVN PN T+ M
Sbjct: 556 GIEPDTFTYNLLI------------HGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 603
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-------- 341
Y K ++E+ E+ + ++ + V Y+ L+ Y G E +++ +
Sbjct: 604 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 663
Query: 342 ----LYRSVFPGVTNLG-----------------------YHAMISSLARIGDIEGMEKI 374
Y S+ G+ N+G Y A+I ++G ++ + +
Sbjct: 664 PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNV 723
Query: 375 FEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
+E S + +M+ Y K G+ A + ++ +G P++ ++ L G +
Sbjct: 724 LQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 783
Query: 435 ERRILEAL 442
E +I E
Sbjct: 784 EGKIEEGF 791
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 112/262 (42%), Gaps = 5/262 (1%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PDT Y L++ R A L ++ + + + Y VM+ Y K + +E
Sbjct: 559 PDTF----TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 614
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
E + +E+ + + L+ YN + + G+T + + + M+ K + P T+S++
Sbjct: 615 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMR-SKGIPPTTATYSSLI 673
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
+G++E A+ + + + V Y L+ Y +G+ ++V V S
Sbjct: 674 HGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 733
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y MI ++ GD++ K+ E + D N++ + + KEG ++
Sbjct: 734 PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI 793
Query: 410 FNSIIEEGGKPNSTSWETLAEG 431
+ + +EG + ++ TL G
Sbjct: 794 CDYMSQEGLPLDEITYTTLVHG 815
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 114/263 (43%), Gaps = 6/263 (2%)
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
LL++ V+A + + + MR +G + ++ + + K + ++ + +M++ G
Sbjct: 218 LLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLG 276
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ +V +YN + G+ ++ E M V VN T+S + +K+ + +A
Sbjct: 277 VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM-VKDGVNATLITYSVLINGLMKLEKFNEA 335
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMI 359
L+ + + V Y+ L+ Y +G + R+ + + + P L +++I
Sbjct: 336 NSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTL--NSII 393
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+IG +E E I EE LS S +P ++ W F+ A F ++ +
Sbjct: 394 QGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMR 453
Query: 420 PNSTSWETLAEGHIRERRILEAL 442
PN TL G +E + +A+
Sbjct: 454 PNDGLLTTLVGGLCKEGKHSDAV 476
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 3/197 (1%)
Query: 147 AIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD 204
+ +D K + E F L + + VY L+ AY R A L D MR
Sbjct: 600 GVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 659
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
KG + Y+ ++ I ++ + ++ EM+++G+ +V Y + G +K
Sbjct: 660 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 719
Query: 265 MEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLL 324
+ V + M ++PN T++ M Y K G ++ A + L + + D V Y+ L
Sbjct: 720 VVNVLQEMS-SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLT 778
Query: 325 SLYGSVGKKEEVYRVWN 341
+ + GK EE +++ +
Sbjct: 779 NGFCKEGKIEEGFKICD 795
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 106/256 (41%), Gaps = 43/256 (16%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
++ +KG+ + + N ++ K E ++ +M E+G LD +YN +S C +G
Sbjct: 481 RLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEG 540
Query: 261 STE---KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
E K+ G E++K + + P+ T++ + ++G++++A +SR D
Sbjct: 541 KVEEGFKLRG--EMVK--QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR----DL 592
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
VP N+Y Y MI + IE EK+F E
Sbjct: 593 VP---------------------NVYT----------YGVMIDGYCKADKIEEGEKLFTE 621
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERR 437
L+ + + N ++ Y + GN +A + + +G P + ++ +L G R
Sbjct: 622 LLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGR 681
Query: 438 ILEALSCLKGAFAAEG 453
+ +A CL EG
Sbjct: 682 MEDA-KCLIDEMRKEG 696
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 121/303 (39%), Gaps = 42/303 (13%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY L++ Y + G+A + M KG +S+ N ++ + KI + ++ E ++ EM
Sbjct: 353 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 412
Query: 238 KEKGIRLDVYSYNI---WLSS---------------------------------CGSQGS 261
+G ++ ++ WL C
Sbjct: 413 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 472
Query: 262 TEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYH 321
++ +E F L+ +K N T + + K G +++A L+++ R D++ Y+
Sbjct: 473 SDAVELWFRLL--EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYN 530
Query: 322 YLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWL 379
L+S GK EE +++ + + + P Y+ +I + RIG ++ ++ E
Sbjct: 531 TLISGCCKEGKVEEGFKLRGEMVKQGIEP--DTFTYNLLIHGMCRIGKLDEAVNLWNECK 588
Query: 380 SVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRIL 439
S + +M+ Y K ++ E F ++ + + NS + TL + R +
Sbjct: 589 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTV 648
Query: 440 EAL 442
EA
Sbjct: 649 EAF 651
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 116/269 (43%), Gaps = 9/269 (3%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+N ++ A ++ + +KG+ + + YN ++ Y K+ + + +M
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 378
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
KGI + + N + G E+ E + E M + + + N F+T+ +
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM-LSRGFSINPGAFTTIIHWLCMNSRF 437
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSV---GKKEEVYRVW-NLYRSVFPGVTNLG 354
E A LR + R R L +L G + GK + +W L F G +
Sbjct: 438 ESALRFLREMLLR---NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF-GANLVT 493
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
+A+I L + G+++ ++ ++ L D N ++S KEG ++ ++
Sbjct: 494 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV 553
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALS 443
++G +P++ ++ L G R ++ EA++
Sbjct: 554 KQGIEPDTFTYNLLIHGMCRIGKLDEAVN 582
>gi|255661190|gb|ACU25764.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 426
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 125/262 (47%), Gaps = 2/262 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A++N + +A++ A LI +MR G +++ Y+ ++T+Y++ K++ E ++
Sbjct: 78 DLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVENKKFLEALTVF 137
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM+E LD+ + NI + G G ++ + +F M+ + PN +++T+ +Y
Sbjct: 138 AEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR-KMGIEPNVVSYNTLLRVYGD 196
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+A R ++ + ++ V Y+ ++ +YG + E+ + +S ++
Sbjct: 197 AELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSIT 256
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +IS ++IG ++ +F++ S D + M+ Y + G A+ + +
Sbjct: 257 YSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK 316
Query: 415 EEGGKPNSTSWETLA-EGHIRE 435
P T+ LA G I E
Sbjct: 317 RPDNIPRDTAIHILAGSGRIEE 338
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 132/302 (43%), Gaps = 13/302 (4%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV- 178
+++ AL V+ M R + L + I +D+ ++ A+ F + + V
Sbjct: 128 KKFLEALTVFAEM--REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 185
Query: 179 -YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL Y A + G A L M+ K + + YN MM +Y K E+++ +++ EM
Sbjct: 186 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +GI + +Y+ +S G ++ +F+ ++ V + + TM Y + G
Sbjct: 246 QSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLR-SSGVEIDQVLYQTMIVAYERAGL 304
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-VTNLG-Y 355
V A +R+ + D +P + + G+ EE W +++ G V ++ +
Sbjct: 305 VAHA----KRLLHELKRPDNIPRDTAIHILAGSGRIEEA--TWVFRQAIDAGEVKDITVF 358
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
MI ++ + ++F++ + D + L+++ Y K FDKA + + +
Sbjct: 359 ERMIHLFSKYKKYSNVVEVFDKMRGLGYFPDSNVTALVLNAYGKLHEFDKANNVYIEMQD 418
Query: 416 EG 417
EG
Sbjct: 419 EG 420
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 5/250 (2%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D +++ Y + M A+ L MR G + + YN ++ +Y + + E
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ M+ K I +V +YN + G EK + + M+ + + PN T+ST+ +++
Sbjct: 206 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIW 264
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K+G++++A +++ S D+V Y ++ Y G R+ L+ P N
Sbjct: 265 SKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRL--LHELKRPD--N 320
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ I LA G IE +F + + D + M+ + K + F+
Sbjct: 321 IPRDTAIHILAGSGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYSNVVEVFDK 380
Query: 413 IIEEGGKPNS 422
+ G P+S
Sbjct: 381 MRGLGYFPDS 390
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 105/237 (44%), Gaps = 1/237 (0%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
+ +++ G++ + YN M+ ++ K K + E S++SEM+ G+ + SY+ L+
Sbjct: 66 IFSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYV 125
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
+ VF M+ K + + TT + M +Y ++G ++A++ + +
Sbjct: 126 ENKKFLEALTVFAEMREIKCL-LDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 318 VPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEE 377
V Y+ LL +YG E ++ L + + Y++M+ + + E + +E
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 378 WLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIR 434
S + + ++S + K G D+A F + G + + ++T+ + R
Sbjct: 245 MQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYER 301
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 123/275 (44%), Gaps = 5/275 (1%)
Query: 173 LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVES 232
L D + L++A + A +D M+ +G A + YN ++ +++ DE
Sbjct: 364 LPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALE 423
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ + M+ G+ Y+Y +++ G G + K FE MK + V PN +
Sbjct: 424 LFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIV-PNIVACNASLYSL 482
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGV 350
+ G++E+A+E ++ D + Y+ L+ YG G+ ++ ++ + P V
Sbjct: 483 AEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEV 542
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ +++I +L + ++ K+F+ +K + N +++ KEG +A A F
Sbjct: 543 VII--NSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALF 600
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+I + PN+ S+ TL + + + AL L
Sbjct: 601 KGMIADDCPPNTISFNTLLDCLCKNGEVDLALKML 635
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 9/271 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++A A NA+ L KM+ + + Y ++ + + D ++
Sbjct: 296 DVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFW 355
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM+ G DV ++ I + + G ++ G ++MK + V PN T++T+ ++
Sbjct: 356 SEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMK-KQGVAPNLHTYNTLICGLLR 414
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSL--YGSVGKKEEVYRVWNLYRS--VFPGV 350
+ ++++A E +ES G + Y Y+L + YG G+ + + + ++ + P +
Sbjct: 415 LNRLDEALELFNSMES--LGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNI 472
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
+ +A + SLA G +E ++ F + D N++M Y K G D A
Sbjct: 473 --VACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLL 530
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ + E G P +L + + R+ EA
Sbjct: 531 SEMEENGCDPEVVIINSLIDTLYKADRVDEA 561
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 174/405 (42%), Gaps = 42/405 (10%)
Query: 41 KHQRQKLPVIKCSMSQIHSYGTVDFERRP--MIKWNAIFRKLSLMDNPQLGSASVLNDWE 98
KH+++++ V C S+ V +R+P + ++R L + +P + S N
Sbjct: 57 KHRKKQVGV--CGFVIRSSFDVVVVKRKPESTMSSEEVYRVLKSISDPN-QAFSFFNSVA 113
Query: 99 KGGRSLTKWELCRVVKE-LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVH 157
+ R + E C V E LR RR + + V++ M Q +I +
Sbjct: 114 EMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLM----------------QKQIIKR-- 155
Query: 158 GVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVM 217
+ + +L++ L Y+R +R A + ++KMR G+ ++ Y +
Sbjct: 156 ----SINTYLTIFKVL------------YIRGGLR-EAPVALEKMRKVGFVLNGYSYIGL 198
Query: 218 MTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKA 277
+ L +K E + M +GI+ + +Y+ + + G + E + G+ + M+
Sbjct: 199 IHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEME-SLG 257
Query: 278 VNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVY 337
+ PN TF+ + + G++++A L+R++ G D V Y L+ + GK
Sbjct: 258 LRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAK 317
Query: 338 RVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
++ ++ + Y ++ + GD++ +++ + E + D +++
Sbjct: 318 ELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDAL 377
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
K G D+A + + ++G PN ++ TL G +R R+ EAL
Sbjct: 378 CKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 9/219 (4%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
Y ++ +K+ +E + EM + G + YNI ++ G QG E +F M
Sbjct: 896 YGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM- 954
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
V + + P+ ++S M +G+V+ A ++ D V Y+ +++ G +
Sbjct: 955 VKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRV 1014
Query: 334 EEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA- 390
EE +++ R+ + P + Y+A+I +L G +E K++EE L +K +P +
Sbjct: 1015 EEALSLFDEMRNRGITPDLYT--YNALILNLGIAGMVEEAGKMYEE-LQLKG-LEPNVFT 1070
Query: 391 -NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
N ++ + GN D+A A + ++ G +PN+ ++ L
Sbjct: 1071 YNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN ++ +K + + + +MK G DV++YN++L + G G +++ ++E M
Sbjct: 791 YNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEM- 849
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ + PN T + + +K ++KA + LY +
Sbjct: 850 LFRGCKPNTITHNIVIFGLVKSNSLDKA----------------------IDLYYDLMSG 887
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+ W Y +I L ++G +E ++ FEE L + + N++
Sbjct: 888 DFSPTPWT-------------YGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNIL 934
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
M+ + K+G+ + A F +++EG +P+ S+ + + ++ +AL
Sbjct: 935 MNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDAL 983
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 126/281 (44%), Gaps = 15/281 (5%)
Query: 157 HGVA-SAEDFFLSLPDTL---KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSL 212
HG A A + FL L + Y +L++ ++AR+ A L KM++ G
Sbjct: 765 HGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVF 824
Query: 213 PYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK-MEGVFEL 271
YN+ + K + E+ + EM +G + + ++NI + S +K ++ ++L
Sbjct: 825 TYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDL 884
Query: 272 MKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
M D + P W T+ + +K+G++E+A++ + + Y+ L++ +G G
Sbjct: 885 MSGDFSPTP-W-TYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQG 942
Query: 332 KKEEVYRVWNLYRSVFPGV-TNL-GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
E ++ R V G+ +L Y M+ L +G ++ FEE S DP +
Sbjct: 943 DVETACELFR--RMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEEL--KLSGLDPDL 998
Query: 390 A--NLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETL 428
NLM++ + ++A + F+ + G P+ ++ L
Sbjct: 999 VCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNAL 1039
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGAL 182
A E++ M G R L + +I +D + V V A +F L L D Y +
Sbjct: 947 ACELFRRMVKEGIRPDLKSY--SIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLM 1004
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGI 242
+N R++ A L D+MR++G YN ++ +E M E++ KG+
Sbjct: 1005 INGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGL 1064
Query: 243 RLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
+V++YN + G+ ++ V++ M V PN TF+ +
Sbjct: 1065 EPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVG-GCRPNTGTFAQL 1109
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 91/208 (43%), Gaps = 5/208 (2%)
Query: 96 DWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAK 155
D G S T W ++ L K R + A + ++ M + G + I ++ K
Sbjct: 883 DLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYN--ILMNGFGK 940
Query: 156 VHGVASAEDFFLSL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
V +A + F + D + Y +++ +A ++++ G +
Sbjct: 941 QGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVC 1000
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN+M+ + + +E S+ EM+ +GI D+Y+YN + + G G E+ ++E ++
Sbjct: 1001 YNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQ 1060
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKA 301
+ K + PN T++ + + G ++A
Sbjct: 1061 L-KGLEPNVFTYNALIRGHSMSGNPDRA 1087
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 7/270 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL++ +++A+M A + +M G V ++ YN+++ K E +
Sbjct: 256 DAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF 315
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M+E+G V +Y+ + S+G+ +F M +D+ PN +++ + +
Sbjct: 316 LAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM-LDRGCEPNLVSYNIIIRGLCR 374
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G++ KA ++ R D Y + L+G + + V L+ S+ T+
Sbjct: 375 AGKLAKAYFYFEKLLQRRLCPD--VYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPN 432
Query: 355 YHA---MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
H+ ++ + R G +E +IF E +S + D + N ++ W G D+A F
Sbjct: 433 LHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFR 492
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+E P++ S+ +L +G R R+ EA
Sbjct: 493 E-LERRSAPDAWSYWSLLDGLSRCERMEEA 521
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 8/250 (3%)
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
+MR++GY ++ Y ++ +MK K + + +M + G + +YNI L G
Sbjct: 247 EMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAG 306
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
+ F M+ ++ T+S + + G V A E RR+ R + V Y
Sbjct: 307 RVAEAYATFLAME-ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSY 365
Query: 321 HYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVT--NLGYHAMISSLARIGDIEGMEKIFE 376
+ ++ GK + Y + L R + P V N H + L + D G+E +FE
Sbjct: 366 NIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSD--GVE-LFE 422
Query: 377 EWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRER 436
+S +S + +++M + G + A F ++ G P+ + TL
Sbjct: 423 SMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAG 482
Query: 437 RILEALSCLK 446
R+ EAL +
Sbjct: 483 RVDEALEVFR 492
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 120/316 (37%), Gaps = 49/316 (15%)
Query: 168 SLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEY 227
LP T+ Y AL++ ++A A ++++M +KG + Y V++ K
Sbjct: 73 CLPTTV----TYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRV 128
Query: 228 DEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK----------------------- 264
+E + +M G R D + Y + G E+
Sbjct: 129 EEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVT 188
Query: 265 ----MEG------------VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRV 308
++G VF+ V++ P+ T++++ K+G+VE+ E +
Sbjct: 189 YTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 248
Query: 309 ESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDI 368
+R D V Y L+ + + +RV+ V+ + Y+ ++ L + G +
Sbjct: 249 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 308
Query: 369 EGMEKIF---EEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
F EE V + + +M + EGN A F +++ G +PN S+
Sbjct: 309 AEAYATFLAMEERGCVATVV---TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSY 365
Query: 426 ETLAEGHIRERRILEA 441
+ G R ++ +A
Sbjct: 366 NIIIRGLCRAGKLAKA 381
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 114/275 (41%), Gaps = 12/275 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++ +A +A L+ KM +K ++ Y ++ +K DE +++
Sbjct: 41 DYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVL 100
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+M EKG + +Y + + G E+ +F M + P+ ++ + K
Sbjct: 101 EQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM-LGNGCRPDAFVYTALIKGLCK 159
Query: 295 MGQVEKA----EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN---LYRSVF 347
G+ E+A +E+ R D V Y L+ G+ E +V++ + R
Sbjct: 160 SGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFI 219
Query: 348 PGVTNLGYHAMISSLARIGDI-EGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
P Y ++I L ++G + EG E+ F E + D ++ ++K KA
Sbjct: 220 PDAVT--YTSIIDGLCKLGRVEEGCER-FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKA 276
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
+ +++ G ++ ++ + +G + R+ EA
Sbjct: 277 HRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 311
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 102/239 (42%), Gaps = 14/239 (5%)
Query: 212 LPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFEL 271
+ + V++ + K DE S++ G D +YN+++ E+++ F+L
Sbjct: 8 VAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFID---GLCKAERVDDAFQL 64
Query: 272 MKV--DKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGS 329
+K +K P T++ + +K G++++A L ++ + Y ++
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 330 VGKKEEVYRVW--NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK--SSY 385
G+ EE R++ L P Y A+I L + G E +++E + K ++
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDA--FVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182
Query: 386 DPRIANL--MMSWYVKEGNFDKAEAFFNS-IIEEGGKPNSTSWETLAEGHIRERRILEA 441
P + ++ K G +A F+ +E G P++ ++ ++ +G + R+ E
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 241
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 12/270 (4%)
Query: 204 DKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTE 263
D GY +NV+M + K + + E+ ++G+R V S+N +S C G E
Sbjct: 241 DSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVE 300
Query: 264 ---KMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
+++GV E + V P+ TFS + K G++++ + R + V +
Sbjct: 301 EGFRLKGVME----SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTF 356
Query: 321 HYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEW 378
L+ GK + + + L + V P + Y+A+I+ L ++GD++ ++ E
Sbjct: 357 TTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVT--YNALINGLCKVGDLKEARRLVNEM 414
Query: 379 LSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+ D ++ K+G+ + A ++EEG + + ++ L G RE R+
Sbjct: 415 TASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRV 474
Query: 439 LEALSCLKGAFAAEGAKSWRPKPVNVINFF 468
+A L +A G K P VI+ F
Sbjct: 475 HDAGRMLTDMLSA-GFKPDDPTYTMVIDCF 503
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 120/268 (44%), Gaps = 1/268 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
+ L++ + +A GNA L+ D++ +G + +N +++ K + +E + M+
Sbjct: 251 FNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVME 310
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+G+ DV++++ ++ +G ++ +F+ M + + PN TF+T+ K G+V
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEM-CGRGLVPNGVTFTTLIDGQCKGGKV 369
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAM 358
+ A ++ + + ++ D V Y+ L++ VG +E R+ N + + + +
Sbjct: 370 DLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTL 429
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
I + GD+E +I + D ++S +EG A ++ G
Sbjct: 430 IDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGF 489
Query: 419 KPNSTSWETLAEGHIRERRILEALSCLK 446
KP+ ++ + + ++ + LK
Sbjct: 490 KPDDPTYTMVIDCFCKKGDVKMGFKLLK 517
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 5/260 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + AL+N + LL D+M +G + + + ++ K + D
Sbjct: 317 DVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNF 376
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
M +G+R D+ +YN ++ G ++ + M + P+ TF+T+ K
Sbjct: 377 QMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTA-SGLKPDKITFTTLIDGCCK 435
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G +E A E RR+ D V + L+S G+ + R+ S +
Sbjct: 436 DGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPT 495
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNS 412
Y +I + GD++ K+ +E S + P + N +M+ K+G A+ ++
Sbjct: 496 YTMVIDCFCKKGDVKMGFKLLKEMQS--DGHVPGVVTYNALMNGLCKQGQMKNAKMLLDA 553
Query: 413 IIEEGGKPNSTSWETLAEGH 432
++ G PN ++ L +GH
Sbjct: 554 MLNVGVAPNDITYNILLDGH 573
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 97/220 (44%), Gaps = 12/220 (5%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN ++ K+ + E +V+EM G++ D ++ + C G ME E+ +
Sbjct: 391 YNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGD---MESALEIKR 447
Query: 274 --VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG 331
V++ + + F+ + + + G+V A L + S D Y ++ + G
Sbjct: 448 RMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKG 507
Query: 332 KKEEVYRVWNLYRS--VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRI 389
+ +++ +S PGV Y+A+++ L + G ++ + + + L+V + +
Sbjct: 508 DVKMGFKLLKEMQSDGHVPGVVT--YNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDIT 565
Query: 390 ANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLA 429
N+++ + K G+ + FNS E+G + S+ L
Sbjct: 566 YNILLDGHSKHGSSVDVD-IFNS--EKGLVTDYASYTALV 602
>gi|18417671|ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635625|sp|O65567.2|PP342_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30825, chloroplastic; Flags: Precursor
gi|332660415|gb|AEE85815.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 10/279 (3%)
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
G L+ Y + AE MR G S Y+ M+T+Y +++ YD+ E ++ MK+
Sbjct: 249 GMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLRLYDKAEEVIDLMKQ 307
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
+RL + ++ + L++ QG E E + M+ +PN ++T+ T Y K+ ++E
Sbjct: 308 DRVRLKLENWLVMLNAYSQQGKMELAESILVSMEA-AGFSPNIIAYNTLITGYGKIFKME 366
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
A+ R+ + D Y ++ +G EE + + + +I
Sbjct: 367 AAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLI 426
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ A+ GD +G K E+ + Y I +++ Y K G D +
Sbjct: 427 NLQAKYGDRDGAIKTIEDMTGIGCQYSS-ILGIILQAYEKVGKIDVVPCVLKGSFHNHIR 485
Query: 420 PNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWR 458
N TS+ +L +++ + + L L+ K WR
Sbjct: 486 LNQTSFSSLVMAYVKHGMVDDCLGLLR-------EKKWR 517
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
++ +Y ++N RA ++M G+ +++ +NV++ +Y K K + +V +
Sbjct: 663 NQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF 722
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
K G+ +DV SYN +++ G M + M+ D + + ++T+ Y K
Sbjct: 723 LLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFD-GFSVSLEAYNTLLDAYGK 780
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
Q+EK L+R++ +G D Y+ ++++YG G +EV V + G
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840
Query: 355 YHAMISSLARIGDIE 369
Y+ +I + G +E
Sbjct: 841 YNTLIKAYGIGGMVE 855
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 146/328 (44%), Gaps = 13/328 (3%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKDRRVYGAL 182
A+++Y+ E L + I D+ + + AE +L+L + + DR + +
Sbjct: 542 AVKIYNHKMESDEEINLHITSTMI--DIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIV 599
Query: 183 LNAYVRARMRGNAELLIDKMRDKGYAVHSL-PYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
+ YV+A A +++ M ++ V + + M+ +Y K D+++ + +++ G
Sbjct: 600 VRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSG 659
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKA 301
I + YN ++ C +++ G FE M + PN TF+ + +Y K +K
Sbjct: 660 IHWNQEMYNCVINCCARALPLDELSGTFEEM-IRYGFTPNTVTFNVLLDVYGKAKLFKKV 718
Query: 302 EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV-FPG--VTNLGYHAM 358
E L + R D + Y+ +++ YG K ++ + + +++ F G V+ Y+ +
Sbjct: 719 NE-LFLLAKRHGVVDVISYNTIIAAYG---KNKDYTNMSSAIKNMQFDGFSVSLEAYNTL 774
Query: 359 ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGG 418
+ + + +E I + S D N+M++ Y ++G D+ + E G
Sbjct: 775 LDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGL 834
Query: 419 KPNSTSWETLAEGHIRERRILEALSCLK 446
P+ S+ TL + + + EA+ +K
Sbjct: 835 GPDLCSYNTLIKAYGIGGMVEEAVGLVK 862
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 149 QLDLIAKVHGVASAEDF------------FLSLPDTLKDRR---------VYGALLNAYV 187
+L L+AK HGV + + ++ +K+ + Y LL+AY
Sbjct: 720 ELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYG 779
Query: 188 RARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVY 247
+ + ++ +M+ YN+M+ +Y + DEV ++ E+KE G+ D+
Sbjct: 780 KDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLC 839
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMAT 290
SYN + + G G E+ G+ + M+ + + P+ T++ + T
Sbjct: 840 SYNTLIKAYGIGGMVEEAVGLVKEMR-GRNIIPDKVTYTNLVT 881
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 114/301 (37%), Gaps = 37/301 (12%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
+LNAY + AE ++ M G++ + + YN ++T Y KI + + + + +
Sbjct: 319 VMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNI 378
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G+ D SY + G + E+ + ++ +K PN T+ + K G +
Sbjct: 379 GLEPDETSYRSMIEGWGRADNYEEAKHYYQELK-RCGYKPNSFNLFTLINLQAKYGDRDG 437
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--------LYRSVFPGVT- 351
A +++ + + I + +L Y VGK + V V L ++ F +
Sbjct: 438 AIKTIEDM-TGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVM 496
Query: 352 ----------NLG----------------YHAMISSLARIGDIEGMEKIFEEWLSVKSSY 385
LG YH +I S G + KI+ +
Sbjct: 497 AYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEI 556
Query: 386 DPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCL 445
+ I + M+ Y G F +AE + ++ G + + + +++ + EA S L
Sbjct: 557 NLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVL 616
Query: 446 K 446
+
Sbjct: 617 E 617
>gi|2244996|emb|CAB10416.1| salt-inducible protein homolog [Arabidopsis thaliana]
gi|7268388|emb|CAB78681.1| salt-inducible protein homolog [Arabidopsis thaliana]
Length = 777
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 115/227 (50%), Gaps = 20/227 (8%)
Query: 125 ALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLK------DRRV 178
AL +YD R E++R+ A + + +++GV+ D L++ + +K + +
Sbjct: 339 ALSLYD--RARTEKWRIDA----VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVI 392
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+++ RA+ A+++ + G+ + Y ++ Y + + D+ ++ EMK
Sbjct: 393 YNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMK 452
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EKG+ L V YN LS C ++ +F+ MK + +P+ TFS++ T+Y G+V
Sbjct: 453 EKGLSLTVILYNTLLSMCADNRHVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRV 512
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLS----LYGSVGKKEEVYRVWN 341
KAE +L ++ R G + P ++L+ YG + ++V R ++
Sbjct: 513 SKAEAALLQI--REAGFE--PTLFVLTSVIQCYGKAKQVDDVVRTFD 555
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 162/376 (43%), Gaps = 29/376 (7%)
Query: 57 IHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSASVLNDWE--KGGRSLTKWELCRVVK 114
I +G FE+ ++ N M NP+ + N E K R + + + +K
Sbjct: 208 ITGFGGKLFEQDAVVTLNN-------MTNPETAPLVLNNLLETMKPSREVILYNV--TMK 258
Query: 115 ELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLI--AKVHGVAS-AEDFF--LSL 169
RK + + + +++D M RG + D A +I A+ +GV A ++F +S
Sbjct: 259 VFRKSKDLEKSEKLFDEMLERGIK-----PDNATFTTIISCARQNGVPKRAVEWFEKMSS 313
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
D A+++AY RA A L D+ R + + + ++ ++ ++ +Y YD
Sbjct: 314 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 373
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ EMK G++ ++ YN + S G + + +++ + + PNW+T++ +
Sbjct: 374 CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL-ITNGFTPNWSTYAALV 432
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFP 348
Y + + A R ++ + + Y+ LLS+ +E + ++ ++
Sbjct: 433 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRHVDEAFEIFQDMKNCETC 492
Query: 349 GVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVK-SSYDPRIANL--MMSWYVKEGNFDK 405
+ + ++I+ A G + E L ++ + ++P + L ++ Y K D
Sbjct: 493 DPDSWTFSSLITVYACSGRVSKAEAAL---LQIREAGFEPTLFVLTSVIQCYGKAKQVDD 549
Query: 406 AEAFFNSIIEEGGKPN 421
F+ ++E G P+
Sbjct: 550 VVRTFDQVLELGITPD 565
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 122/268 (45%), Gaps = 1/268 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y ++ Y + AE+L+ +M ++G A ++ Y +++ + K ++ ++++M
Sbjct: 328 TYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKM 387
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +G + ++Y+YN + +G ++ V M ++ + + T++ M T + K G
Sbjct: 388 RREGFQPNIYTYNALIDGLCKKGKIQEAYKVLR-MANNQGLQLDKVTYTVMITEHCKQGH 446
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ A + R+ D Y L++ Y + EE ++++ ++ T Y +
Sbjct: 447 ITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTS 506
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEG 417
MI+ ++G ++FE + D ++S KE ++A A + ++++
Sbjct: 507 MIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKR 566
Query: 418 GKPNSTSWETLAEGHIRERRILEALSCL 445
P + TLA + R + + A+S L
Sbjct: 567 LVPCEVTPVTLAFEYCRREKAVVAVSIL 594
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 112/255 (43%), Gaps = 9/255 (3%)
Query: 197 LLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSC 256
L + ++ Y + Y VM+ Y K + E ++ M E+G+ + +Y +S
Sbjct: 312 LFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGH 371
Query: 257 GSQGSTEKMEGVFELMKVDK--AVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITG 314
+GS FELM + PN T++ + K G++++A + LR ++
Sbjct: 372 CKEGS---FNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQ 428
Query: 315 RDRVPYHYLLSLYGSVGKKEEVYRVWNLY--RSVFPGVTNLGYHAMISSLARIGDIEGME 372
D+V Y +++ + G ++N P + Y +I+ + +E +
Sbjct: 429 LDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHT--YTTLIARYCQQRQMEESQ 486
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
K+F++ L+++ + M++ Y K G A F +++ G + +S ++ L G
Sbjct: 487 KLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGL 546
Query: 433 IRERRILEALSCLKG 447
+E R+ EA + +G
Sbjct: 547 CKESRLEEARALYEG 561
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 127/332 (38%), Gaps = 50/332 (15%)
Query: 141 LSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLID 200
L+ DA + L +A G A+A + F L R + + A RG+ + +
Sbjct: 56 LAPDDAIVALSSLADSAGSAAALELFRRLASRQDVRHLMRLYVTAATTFVDRGSLPMAHE 115
Query: 201 KMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQG 260
MR M+ + + E MV EM+ G+ V + N L + G
Sbjct: 116 AMRR------------MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTG 163
Query: 261 STEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPY 320
S VF+ M + P+ +F + + G++E+ + L ++ + D
Sbjct: 164 SFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATC 223
Query: 321 HYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN-------------------------- 352
++ ++ G+ +V ++ L P V N
Sbjct: 224 TVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVA 283
Query: 353 -------LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNF 403
+ ++I+ L +IG E ++F + + SSY P + +M+ Y KEG
Sbjct: 284 KGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIK-SSSYKPNVHTYTVMIGGYCKEGKL 342
Query: 404 DKAEAFFNSIIEEGGKPNSTSWETLAEGHIRE 435
+AE ++E+G PN+ ++ TL GH +E
Sbjct: 343 ARAEMLLGRMVEQGLAPNTNTYTTLISGHCKE 374
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 101/222 (45%), Gaps = 4/222 (1%)
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
++ EM KG++ +VY++ ++ G TE+ +F + + PN T++ M Y
Sbjct: 277 VLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGY 336
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVF-PGV 350
K G++ +AE L R+ + + Y L+S + G + + N + R F P +
Sbjct: 337 CKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNI 396
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
Y+A+I L + G I+ K+ + D +M++ + K+G+ A F
Sbjct: 397 YT--YNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLF 454
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAE 452
N + E G P+ ++ TL + ++R++ E+ A E
Sbjct: 455 NRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIE 496
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 129/263 (49%), Gaps = 18/263 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A+++ + +A +A+ ++D+M+ KG++ + +N+M+ + + D +
Sbjct: 43 DVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVF 102
Query: 235 SE-MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
E +K+ + + +Y I + + +G ++ + + M + + + P+ T++ +
Sbjct: 103 EELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEM-LSRGLEPDTFTYNVITRGLC 161
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN---LYRSVFPGV 350
K G+V++A E +R + SR D + Y+ LL + GK +E + W R P V
Sbjct: 162 KEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEK-WMSEIFSRGCEPNV 220
Query: 351 TNLGYHAMISSLARIGDIE---GMEKIF-EEWLSVKS-SYDPRIANLMMSWYVKEGNFDK 405
Y +ISSL R G IE + K+ E+ L+ + YDP IA + +EG D
Sbjct: 221 VT--YSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIA-----AFCREGKLDM 273
Query: 406 AEAFFNSIIEEGGKPNSTSWETL 428
A F + +I +G P+ ++ T+
Sbjct: 274 AIEFLDCMICDGFLPDIVNYNTI 296
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 161/407 (39%), Gaps = 35/407 (8%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
V+ K R + A V D M +G + D +I G + +
Sbjct: 50 VISGFCKANRIESAKTVLDRMKRKG-----FSPDVVTHNIMIGTFCGKGKIDLALKVFEE 104
Query: 172 TLKDRRV------YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
LKD Y L+ AY+ A L+D+M +G + YNV+ K
Sbjct: 105 LLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEG 164
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK----MEGVFELMKVDKAVNPN 281
+ D V + +G + DV +YNI L + +QG ++ M +F + PN
Sbjct: 165 KVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFS-----RGCEPN 219
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
T+S + + + G++E++ ++ ++ + D Y L++ + GK + +
Sbjct: 220 VVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLD 279
Query: 342 --LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVK 399
+ P + N Y+ ++++L + G+ + +IF + V + N M+S
Sbjct: 280 CMICDGFLPDIVN--YNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWS 337
Query: 400 EGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRP 459
G+ +A + ++ +G P+ ++ +L R+ + EA+ L S R
Sbjct: 338 SGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADML------SGRF 391
Query: 460 KPVNVINF----FKACEEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
+P N++++ C+ + E A++ E Y LI
Sbjct: 392 QP-NIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLI 437
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 15/264 (5%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y LL A + E + ++ +G + + Y+++++ + + +E ++V
Sbjct: 184 DVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLV 243
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MKEKG+ D Y Y+ +++ +G + + M D + P+ ++T+ K
Sbjct: 244 KVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFL-PDIVNYNTIMAALCK 302
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-----LYRSVFPG 349
G + A E +++ + Y+ +LS S G + YR L + + P
Sbjct: 303 NGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDR---YRALGMISQMLSKGIDPD 359
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIAN--LMMSWYVKEGNFDKAE 407
V + Y+++IS L R G ++ + + LS + P I + ++ K D A
Sbjct: 360 V--ITYNSLISCLCRDGMVDEAIGLLADMLS--GRFQPNIVSYKTVLLGLCKAHRIDDAI 415
Query: 408 AFFNSIIEEGGKPNSTSWETLAEG 431
++IE G +PN T++ L EG
Sbjct: 416 EVLAAMIENGCQPNETTYTLLIEG 439
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 93/214 (43%), Gaps = 12/214 (5%)
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
EK + DV++YN +S E + V + MK K +P+ T + M + G++
Sbjct: 37 EKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMK-RKGFSPDVVTHNIMIGTFCGKGKI 95
Query: 299 EKA----EESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTN 352
+ A EE L+ + T + Y L+ Y G +E ++ + L R + P
Sbjct: 96 DLALKVFEELLKDNNCKPT---LITYTILIEAYILEGGIDEALKLLDEMLSRGLEP--DT 150
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y+ + L + G ++ + S D N+++ + +G +D+ E + +
Sbjct: 151 FTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSE 210
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
I G +PN ++ L R+ +I E+++ +K
Sbjct: 211 IFSRGCEPNVVTYSILISSLCRDGKIEESVNLVK 244
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 140/335 (41%), Gaps = 42/335 (12%)
Query: 150 LDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
++L KV + A F L D+ +Y +++N Y +A+ A+ L+ +M++ G
Sbjct: 102 IELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGL 161
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME- 266
++ Y +++ Y + ++Y E + + EMK KGI+LDV + N+ + G E
Sbjct: 162 MPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEE 221
Query: 267 -----------------------------------GVFELMKVDKAVNPNWTTFSTMATM 291
VF M+ V PN T++T+ +
Sbjct: 222 LFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFL 281
Query: 292 YIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
+ Q EKA +R+++ R + V Y L+S+YG GK + ++ R +
Sbjct: 282 HGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMD 341
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y +MI R G + +++ EE + PR + +S K ++A +
Sbjct: 342 EILYQSMIVVYERAGLVAHAKRLLEEL--KQPDIVPR--DTAISILAKAEKLEEAAKLYW 397
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
E G S +++++ + +R +R A+ +
Sbjct: 398 RSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFE 432
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 118/259 (45%), Gaps = 9/259 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D ++ L+ + + A L K++ G A + YN M+ LY K K Y E + ++
Sbjct: 94 DLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLL 153
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EMKE G+ D SY I +++ + + VF MK K + + TT + M +Y K
Sbjct: 154 AEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKT-KGIQLDVTTCNMMIDVYGK 212
Query: 295 MGQVEKAEESLRRVESRITG--RDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS---VFPG 349
+ V AEE + S+ G ++ V Y+ ++ +Y E + V+ ++ V P
Sbjct: 213 LEMVRDAEELFWSM-SKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPN 271
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
V + Y+ ++ E ++ + + + ++S Y K G +D+A
Sbjct: 272 V--ITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFL 329
Query: 410 FNSIIEEGGKPNSTSWETL 428
F ++ E+G + + ++++
Sbjct: 330 FKTLREKGFEMDEILYQSM 348
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/314 (18%), Positives = 140/314 (44%), Gaps = 12/314 (3%)
Query: 122 YKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL--PDTLKDRRVY 179
++ +L ++DWM +G + S + L + + AE L + D + D+ +
Sbjct: 5 WQRSLALHDWMIEKG-GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTF 63
Query: 180 GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKE 239
L++ Y RA +A + +M G + ++ ++ L K+K+Y + S+ S++K
Sbjct: 64 STLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKA 123
Query: 240 KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVE 299
GI D YN ++ G ++ +G+ MK + + P+ +++ + Y + +
Sbjct: 124 SGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMK-EAGLMPDTVSYTILINAYAESQKYL 182
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGS---VGKKEEVYRVWNLYRSVFPGVTNLGYH 356
+A++ ++++ D + ++ +YG V EE++ W++ +++ + Y+
Sbjct: 183 EAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELF--WSMSKTLGIQQNVVTYN 240
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNSII 414
MI + +F ++ K +P + N ++ + +KA +
Sbjct: 241 TMIKVYKEAELLSEAFNVF-YYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQ 299
Query: 415 EEGGKPNSTSWETL 428
+ G +PN+ ++ TL
Sbjct: 300 QRGIEPNAVTYSTL 313
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 125/285 (43%), Gaps = 8/285 (2%)
Query: 171 DTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEV 230
D D + L++ + + + L+++M G + Y ++ + K DE
Sbjct: 362 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEA 421
Query: 231 ESMVSEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ M G + + SY I L C ++ + + + ++++ +NP TF+T+
Sbjct: 422 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP--ITFNTLI 479
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG 349
K G VE+A E L+++ D + Y ++ G GK +E + N+ +
Sbjct: 480 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 539
Query: 350 VTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAF 409
+ Y ++ S+L+R G I + ++F+ D + N ++S K G ++A F
Sbjct: 540 PNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEF 599
Query: 410 FNSIIEEGGKPNSTSWETL-----AEGHIRERRILEALSCLKGAF 449
++ G PN +++ L +EG ++E + + C KGA
Sbjct: 600 LAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D R+Y +++ + A ++++M G + + YN ++ + ++E E ++
Sbjct: 296 DIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 355
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
+EM +K LD ++NI + G +++ + E M V + P+ T++T+ + K
Sbjct: 356 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCM-PDVITYTTVINGFCK 414
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G +++A L+ + + + + Y +L S + + + + + +
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 474
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
++ +I+ L + G +E ++ ++ L S D + ++ K G D+A N ++
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 415 EEGGKPNSTSWETLAEGHIRERRI 438
+G PN+ + ++A RE RI
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRI 558
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 165/425 (38%), Gaps = 52/425 (12%)
Query: 112 VVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD 171
VV+ L R AL V D M RG + + L A G F S
Sbjct: 128 VVRALCARGRIADALAVLDEMPRRG----CAPIPPMYHVILEAACRGGG-----FRSAVR 178
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY---AVH---SLP----------YN 215
L+D G L+ GN L+++ + D+G A+H LP YN
Sbjct: 179 VLEDLHARGCALDV-------GNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYN 231
Query: 216 VMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD 275
++ K + V+ ++ EM ++ ++N +S G E++ V M +
Sbjct: 232 AVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMA-E 290
Query: 276 KAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEE 335
P+ ++T+ K G ++ A E L R+ S + V Y+ LL S + EE
Sbjct: 291 HGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEE 350
Query: 336 VYRVW-NLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMM 394
+ ++ P + ++ ++ ++ + G ++ + ++ E+ L D ++
Sbjct: 351 TEELLAEMFDKDCP-LDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVI 409
Query: 395 SWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGA 454
+ + KEG D+A S+ G KPN+ S+ + +G R ++A L +G
Sbjct: 410 NGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED-LMSQMIQQGC 468
Query: 455 KSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQ-------P---GYRKEKDYMSLIGL 504
P+N I F G E + LL+Q P Y D + G
Sbjct: 469 ------PLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522
Query: 505 TDEAV 509
TDEA+
Sbjct: 523 TDEAL 527
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y +++ +A A L++ M +KG + +++ Y+ + + + ++V M ++
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ 569
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ IR D YN +SS +G TE+ M V PN +T++ + G V
Sbjct: 570 DTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM-VSSGCVPNESTYTILIRGLASEGFV 628
Query: 299 EKAEESLRRVESRITGRDRVPYHY 322
++A+E L + S+ R + H+
Sbjct: 629 KEAQEMLTELCSKGALRKHLMKHF 652
>gi|359487410|ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 158/349 (45%), Gaps = 30/349 (8%)
Query: 111 RVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAI-------QLDLIAKVHGVASAE 163
+++ L K ++ + A +++ M + G R L A + QLD + E
Sbjct: 133 KLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHSGQLD-----KAFCTVE 187
Query: 164 DFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMK 223
D S+ D D Y L+ E + +M G ++ YN ++ Y K
Sbjct: 188 DM-KSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGK 246
Query: 224 IKEYDEVESMVSEMKEKGIRL-DVYSYNIWLSSCGSQGSTEKME---GVFELMKVDKAVN 279
++ +ES ++EM E G L D+++ N ++ + G+ G EKME F+LM +
Sbjct: 247 ADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLM----GIR 302
Query: 280 PNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVG--KKEEVY 337
P+ TF+ + Y K EK + ++ R V ++ ++ ++G VG +K E +
Sbjct: 303 PDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEF 362
Query: 338 RVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWY 397
+ ++ V P ++ Y +++S+ ++ G ++ ++ I + + + D N ++S Y
Sbjct: 363 FLKMKHQGVKPN--SITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAY 420
Query: 398 VKEGNFDKAEAFFNSIIEEGGKPNSTSWETL-----AEGHIRERRILEA 441
+ G+ ++ F + E KP++ ++ T+ A+G I + LE
Sbjct: 421 GQAGDVERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLEV 469
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 117/262 (44%), Gaps = 11/262 (4%)
Query: 177 RVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+ Y LL + + A LL + M +G Y +++ Y + D+ V +
Sbjct: 129 QTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHSGQLDKAFCTVED 188
Query: 237 MKE-KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
MK + DVY+Y+I + C + G + +E +F M + + T++T+ Y K
Sbjct: 189 MKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSY-LGIECSTVTYNTIIDGYGKA 247
Query: 296 GQVEKAEESLRR-VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYR--SVFPGVTN 352
E E SL +ES D + + YG+ G+ E++ + ++ ++ + P +
Sbjct: 248 DMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIKT 307
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFF 410
++ +I S + E M + E K Y P I N+++ + + GN +K E FF
Sbjct: 308 --FNILIRSYGKACMYEKMVSVME--FMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFF 363
Query: 411 NSIIEEGGKPNSTSWETLAEGH 432
+ +G KPNS ++ +L +
Sbjct: 364 LKMKHQGVKPNSITYCSLVSAY 385
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+N+++ Y K Y+++ S++ MK++ + ++NI + G G+ EKME F MK
Sbjct: 308 FNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMK 367
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
+ V PN T+ ++ + Y K G ++K + LR++E+ D ++ +LS YG G
Sbjct: 368 -HQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDV 426
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPR 388
E + ++ + + N+ + MI + G IE + + ++ K+ R
Sbjct: 427 ERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLEVNMITTKNKSGTR 481
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 139/331 (41%), Gaps = 13/331 (3%)
Query: 116 LRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKD 175
L K R A+EVY M ER R + + +++ K SA F +
Sbjct: 267 LLKARCTVKAVEVYQRMKK--ERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCK 324
Query: 176 RRV--YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
+ Y AL+NA+ R + AE + ++M+ G+ YN +M Y + +
Sbjct: 325 ANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEI 384
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
S M+ G D SYNI + + G G + E FE +K + + P + + + +
Sbjct: 385 FSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLK-QQGMAPTMKSHMLLLSAHA 443
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
+ G V + E+ + ++ D + +L Y G+ +++ R+ L G ++
Sbjct: 444 RSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERL--LAAMDLAGSADV 501
Query: 354 GYHAM-ISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM-----MSWYVKEGNFDKAE 407
G H + +++ AR G + ME FE K A+++ M Y ++ + K
Sbjct: 502 GSHNVAVNAYARAGYLGRMEAAFEGIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGKCL 561
Query: 408 AFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
F +++ G P++ + + L ER++
Sbjct: 562 EIFEEMVDAGCYPDAGTAKVLMAACSDERQV 592
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 134/333 (40%), Gaps = 4/333 (1%)
Query: 108 ELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFL 167
++ V +LR R++ + V +W+ R FR + +D + + AE +
Sbjct: 153 DILNVAVQLRLNRQWDPIISVCEWIVYRSS-FRPDIICYNLLIDAYGRKRQLNKAESIYA 211
Query: 168 SL--PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIK 225
++ + Y LL AY AR AE +I +M++ G + YN + +K +
Sbjct: 212 AVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISEMQEHGIPPSATVYNAYLDGLLKAR 271
Query: 226 EYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTF 285
+ + MK++ R + +Y + ++ G +F M+ N T+
Sbjct: 272 CTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQ-SIGCKANICTY 330
Query: 286 STMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS 345
+ + + + G EKAEE +++ D Y+ L+ Y G + +++L +
Sbjct: 331 TALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQH 390
Query: 346 VFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDK 405
+ Y+ ++ + R G E FE + + L++S + + GN +
Sbjct: 391 MGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGR 450
Query: 406 AEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
E + + G +P++ + + + R R+
Sbjct: 451 CEQVMAQLHKSGLRPDTFALNAMLHAYARAGRL 483
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 1/236 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
VY A L+ ++AR A + +M+ + ++ Y +M+ +Y K K+ + +EM
Sbjct: 259 VYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEM 318
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ G + ++ +Y +++ +G EK E VFE M+ P+ ++ + Y + G
Sbjct: 319 QSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQ-QAGHEPDVYAYNALMEAYSRAGF 377
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
+ A E ++ DR Y+ L+ YG G E + + T +
Sbjct: 378 PQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHML 437
Query: 358 MISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSI 413
++S+ AR G++ E++ + D N M+ Y + G D E ++
Sbjct: 438 LLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERLLAAM 493
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 143/320 (44%), Gaps = 42/320 (13%)
Query: 164 DFFLSLPDTLKDRRVY--GALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLY 221
+F+L + D VY L++ + + NA ++ D++ +G + +N +++ Y
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271
Query: 222 MKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPN 281
+ K +E + S M+ + I DV++Y+ ++ + E+ G+F+ M + + PN
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEM-CEMGLVPN 330
Query: 282 WTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN 341
TF+T+ K G+++ A LR E +DR G + ++
Sbjct: 331 GVTFTTLIDGQCKHGKIDLA---LRNFE---IMKDR-------------GIRPDL----- 366
Query: 342 LYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEG 401
+ Y+A+I+ L R GD++ K+ E + D +M K+G
Sbjct: 367 -----------ITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDG 415
Query: 402 NFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKP 461
+ D A + ++EEG + + ++ L G R+ R+ +A LK +A G K P
Sbjct: 416 DMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSA-GHKPDDPTY 474
Query: 462 VNVINFFKACEE-ESDMGSK 480
VI+ F C++ + MG+K
Sbjct: 475 TMVIDCF--CKKGDVKMGAK 492
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 105/261 (40%), Gaps = 1/261 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL+N + A L D+M + G + + + ++ K + D
Sbjct: 295 DVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNF 354
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
MK++GIR D+ +YN ++ G ++ + M + P+ TF+T+ K
Sbjct: 355 EIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM-IGNGFKPDKITFTTLMDGCCK 413
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G ++ A E R+ D V + L+S G+ + R+ S +
Sbjct: 414 DGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPT 473
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +I + GD++ K+ +E N +M+ + K+G A+ ++++
Sbjct: 474 YTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAML 533
Query: 415 EEGGKPNSTSWETLAEGHIRE 435
PN ++ L +GH +
Sbjct: 534 NMEVVPNDITFNILLDGHCKH 554
>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 169/373 (45%), Gaps = 18/373 (4%)
Query: 73 WNAIFRKLSLMDNPQLGSASVLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWM 132
W + R++ D+P SVL +SL K + + ++ +++ ++ +W+
Sbjct: 75 WRGLMRQIEETDSP----VSVLKSKLINNQSLPKHLVLGTLVRFKQLKKWHLVSQILEWV 130
Query: 133 NNRGERFRLSASDAAIQLDLIAKVHGVASAEDF--FLSLPDTLKDRRVYGALLNAYVRAR 190
+ + + D+ + + K ++AE +++ + + + AL+ AY R
Sbjct: 131 RTQS-WWDFNEMDSLMLITAYGKQGNFSAAEKVLSYMNKMGYVPNVVSHTALMEAYGRGA 189
Query: 191 MRGNAELLIDKMRDKGYAVHSLPYNVMMTLYM---KIKEYDEVESMVSEMKEKGIRLDVY 247
NAE + +M+ G ++ Y +++ ++ K KE +EV + + ++ ++ D
Sbjct: 190 RYNNAEAIFRRMQSSGPKPSAVTYQIILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQK 249
Query: 248 SYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRR 307
+++ + G+ EK +F LM + V + T++++ + +V K + ++R
Sbjct: 250 MFHMMIYMHRKAGNYEKARQIFALM-TQRGVPKSTVTYNSLMSFETNYKEVSKIYDQMQR 308
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYHAMISSLARI 365
+ D + Y L++ YG +++E V+ L V P T+ Y+ ++ + A
Sbjct: 309 SGLQ---PDVISYALLINAYGKARREDEALAVFEEMLDAGVRP--THKAYNILLDAFAIS 363
Query: 366 GDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSW 425
G +E +F+ + + D M+S YV + AE FFN + ++G +PN ++
Sbjct: 364 GMVEQARTVFKSMRRDRYTPDLCSYTTMLSAYVNASDMAGAENFFNRLKQDGLEPNVVTY 423
Query: 426 ETLAEGHIRERRI 438
L +G+ + +
Sbjct: 424 GALIKGYAKTNNL 436
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 170 PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDE 229
PD + Y L+NAY +AR A + ++M D G YN+++ + ++
Sbjct: 313 PDVIS----YALLINAYGKARREDEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 368
Query: 230 VESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMA 289
++ M+ D+ SY LS+ + E F +K D + PN T+ +
Sbjct: 369 ARTVFKSMRRDRYTPDLCSYTTMLSAYVNASDMAGAENFFNRLKQD-GLEPNVVTYGALI 427
Query: 290 TMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYG 328
Y K ++K E ++ R ++ + ++ YG
Sbjct: 428 KGYAKTNNLDKMMEKYEEMQLRGVKANQTIFTTIMDAYG 466
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 12/146 (8%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSL------PD 171
K RR AL V++ M + G R A + I LD A V A F S+ PD
Sbjct: 327 KARREDEALAVFEEMLDAGVRPTHKAYN--ILLDAFAISGMVEQARTVFKSMRRDRYTPD 384
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
Y +L+AYV A AE ++++ G + + Y ++ Y K D++
Sbjct: 385 LCS----YTTMLSAYVNASDMAGAENFFNRLKQDGLEPNVVTYGALIKGYAKTNNLDKMM 440
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCG 257
EM+ +G++ + + + + G
Sbjct: 441 EKYEEMQLRGVKANQTIFTTIMDAYG 466
>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
turbinata]
Length = 441
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 156/345 (45%), Gaps = 13/345 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A++N + +A++ A LI +M+ G ++ Y+ ++T+Y++ K++ E S+
Sbjct: 85 DLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVF 144
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM+E LD+ + NI + G G ++ + +F M+ + PN +++T+ +Y
Sbjct: 145 SEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR-KMGIEPNVVSYNTLLRVYGD 203
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+A R ++ + ++ V Y+ ++ +YG + E+ + +S ++
Sbjct: 204 AELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGVEPNSIT 263
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +IS ++G ++ +F++ S D + M+ Y + G A+ + +
Sbjct: 264 YSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK 323
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK--SWRPKPVNVINFFKACE 472
P T+ LA RI EA + A A K + + +++++ +K
Sbjct: 324 RPDNIPRDTAIHILAGAG----RIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYS 379
Query: 473 EESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKND 517
++ K +R GY + D ++++ + E +K ND
Sbjct: 380 NVIEVFDK------MRGLGYFPDSDVIAIVLNAYGKLQEFDKAND 418
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 134/302 (44%), Gaps = 13/302 (4%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV- 178
+++ AL V+ M R + L + I +D+ ++ A+ F + + V
Sbjct: 135 KKFLEALSVFSEM--REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 192
Query: 179 -YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL Y A + G A L M+ K + + YN MM +Y K E+++ +++ EM
Sbjct: 193 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 252
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +G+ + +Y+ +S G G ++ +F+ ++ V + F TM Y + G
Sbjct: 253 QSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLR-SSGVEIDQILFQTMIVAYERAGL 311
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-VTNLG-Y 355
V A +R+ + D +P + + G+ EE V+ +++ G V ++ +
Sbjct: 312 VAHA----KRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFR--QAIDAGEVKDITVF 365
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
MI L++ + ++F++ + D + ++++ Y K FDKA + + E
Sbjct: 366 ERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQE 425
Query: 416 EG 417
G
Sbjct: 426 VG 427
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM+++ + D Y+Y+ ++ G +G + + M+ D+ V + +S + +
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQ-VPGDLVLYSNLIELS 61
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGV 350
K+ KA R++ D V Y+ +++++G E + + ++ V P
Sbjct: 62 RKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 121
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
T+ Y +++ +F E +K D N+M+ Y + G +A+ F
Sbjct: 122 TS--YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 179
Query: 411 NSIIEEGGKPNSTSWETL 428
+ + G +PN S+ TL
Sbjct: 180 WGMRKMGIEPNVVSYNTL 197
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 156/345 (45%), Gaps = 13/345 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y A++N + +A++ A LI +M+ G ++ Y+ ++T+Y++ K++ E S+
Sbjct: 84 DLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVF 143
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
SEM+E LD+ + NI + G G ++ + +F M+ + PN +++T+ +Y
Sbjct: 144 SEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR-KMGIEPNVVSYNTLLRVYGD 202
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+A R ++ + ++ V Y+ ++ +YG + E+ + +S ++
Sbjct: 203 AELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSIT 262
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y +IS ++G ++ +F++ S D + M+ Y + G A+ + +
Sbjct: 263 YSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK 322
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAK--SWRPKPVNVINFFKACE 472
P T+ LA RI EA + A A K + + +++++ +K
Sbjct: 323 RPDNIPRDTAIHILAGAG----RIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKXS 378
Query: 473 EESDMGSKEAFVALLRQPGYRKEKDYMSLIGLTDEAVAENNKKND 517
++ K +R GY + D ++++ + E +K ND
Sbjct: 379 NVVEVFDK------MRGLGYFPDSDVIAIVLNAYGKLQEFDKAND 417
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 134/302 (44%), Gaps = 13/302 (4%)
Query: 120 RRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRV- 178
+++ AL V+ M R + L + I +D+ ++ A+ F + + V
Sbjct: 134 KKFLEALSVFSEM--REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 191
Query: 179 -YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
Y LL Y A + G A L M+ K + + YN MM +Y K E+++ +++ EM
Sbjct: 192 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 251
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+ +GI + +Y+ +S G G ++ +F+ ++ V + F TM Y + G
Sbjct: 252 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR-SSGVEIDQILFQTMIVAYERAGL 310
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPG-VTNLG-Y 355
V A +R+ + D +P + + G+ EE V+ +++ G V ++ +
Sbjct: 311 VAHA----KRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFR--QAIDAGEVKDITVF 364
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
MI L++ + ++F++ + D + ++++ Y K FDKA + + E
Sbjct: 365 ERMIHLLSKYKKXSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQE 424
Query: 416 EG 417
G
Sbjct: 425 VG 426
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 85/198 (42%), Gaps = 5/198 (2%)
Query: 233 MVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMY 292
+ EM+ + + D Y+Y+ ++ G +G + + M+ D+ V + +S + +
Sbjct: 2 LFDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQ-VPGDLVLYSNLIELS 60
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGV 350
K+ KA R++ D V Y+ +++++G E + + ++ V P
Sbjct: 61 RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
T+ Y +++ +F E +K D N+M+ Y + G +A+ F
Sbjct: 121 TS--YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 178
Query: 411 NSIIEEGGKPNSTSWETL 428
+ + G +PN S+ TL
Sbjct: 179 WGMRKMGIEPNVVSYNTL 196
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 144/331 (43%), Gaps = 15/331 (4%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRR----- 177
+ A+E+++ M +R R S A ++ ++G AS L + ++ ++
Sbjct: 293 QKAVEIFERM----KRDRCQPSTAT--YTMLINLYGKASKSYMALKVFHEMRSQKCKPNI 346
Query: 178 -VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+ AL+NA+ R + AE + +++++ G YN +M Y + + S
Sbjct: 347 CTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSL 406
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M+ G D SYNI + + G G E + VFE+MK + P + + + Y + G
Sbjct: 407 MQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMK-RLGITPTMKSHMLLLSAYSRAG 465
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGY 355
+V K EE + ++ D + +L+LYG +G+ E++ V + + +P + Y
Sbjct: 466 KVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADIST-Y 524
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +I+ R G ME++F + D + Y + +++ F +I+
Sbjct: 525 NILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMID 584
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G P+ + + L +I E + ++
Sbjct: 585 AGCYPDGGTAKVLLSACSNGDQIQEVTTVIR 615
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 110/249 (44%), Gaps = 6/249 (2%)
Query: 180 GALLNAYVRARMRGN----AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ NAY+ M+G A + ++M+ + Y +++ LY K + +
Sbjct: 276 AVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFH 335
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM+ + + ++ ++ +++ +G EK E +FE ++ + + P+ ++ + Y +
Sbjct: 336 EMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ-EAGLEPDVYAYNALMEAYSRA 394
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G A E ++ DR Y+ ++ YG G E+ V+ + + + T +
Sbjct: 395 GFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSH 454
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
++S+ +R G + E+I + D + N M++ Y + G F+K E + +E
Sbjct: 455 MLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTA-ME 513
Query: 416 EGGKPNSTS 424
+G P S
Sbjct: 514 KGPYPADIS 522
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 117/312 (37%), Gaps = 34/312 (10%)
Query: 145 DAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD 204
+ A+QL L + + + L D Y L++AY + + AE ++ +
Sbjct: 175 NVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLE 234
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
Y +++ Y ++ E++ +EM++ G YN ++ G T+K
Sbjct: 235 ARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQK 294
Query: 265 MEGVFELMKVDKA----------------------------------VNPNWTTFSTMAT 290
+FE MK D+ PN TF+ +
Sbjct: 295 AVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVN 354
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
+ + G EKAEE +++ D Y+ L+ Y G +++L + +
Sbjct: 355 AFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEP 414
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
Y+ M+ + R G E + +FE + + + L++S Y + G K E
Sbjct: 415 DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIV 474
Query: 411 NSIIEEGGKPNS 422
N + + G KP++
Sbjct: 475 NQMHKSGIKPDT 486
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 11/268 (4%)
Query: 174 KDRRV-----YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYD 228
K+RRV Y ++ Y A A L+++ R KG + YN ++T K+ + D
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELM-KVDKA-VNPNWTTFS 286
E + EMK K ++ +YNI + G K++ FEL + KA + PN T +
Sbjct: 361 EALKVFEEMK-KDAAPNLSTYNILIDMLCRAG---KLDTAFELRDSMQKAGLFPNVRTVN 416
Query: 287 TMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSV 346
M K ++++A ++ ++ D + + L+ G VG+ ++ Y+V+
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
Query: 347 FPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKA 406
++ Y ++I + G E KI+++ ++ S D ++ N M K G +K
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 407 EAFFNSIIEEGGKPNSTSWETLAEGHIR 434
A F I P++ S+ L G I+
Sbjct: 537 RAMFEEIKARRFVPDARSYSILIHGLIK 564
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 123/271 (45%), Gaps = 14/271 (5%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
Y L+ A+ L +M++ GY + ++ + K D S++ EMK
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+ D+ YN+ + S G G + F ++ + + P+ T+++M + K ++
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKANRL 289
Query: 299 EKAEESLRRVESRITGRDRVP----YHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
++A E +E RVP Y+ ++ YGS GK +E Y + R+ + +
Sbjct: 290 DEAVEMFEHLEKN----RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIA 345
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNS 412
Y+ +++ L ++G ++ K+FEE +K P ++ N+++ + G D A +S
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEE---MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALS 443
+ + G PN + + + + +++ EA +
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/420 (19%), Positives = 170/420 (40%), Gaps = 43/420 (10%)
Query: 38 SAIKHQRQK--LPVI---KCSMSQIHSYGTVDFERRPMIKWNAIFRKLSLMDNPQLGSAS 92
S ++ QR K +P + C ++ + G VD + +F ++ P L + +
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK-------VFEEMKKDAAPNLSTYN 381
Query: 93 VLNDWEKGGRSLTKWELCRVVKELRKFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDL 152
+L D LCR K A E+ D M G + I +D
Sbjct: 382 ILIDM-----------LCRAGK-------LDTAFELRDSMQKAG--LFPNVRTVNIMVDR 421
Query: 153 IAKVHGVASA------EDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+ K + A D+ + PD + + +L++ + +A + +KM D
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEI----TFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
+S+ Y ++ + ++ + +M + D+ N ++ G EK
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
+FE +K + V P+ ++S + IK G + E ++ + D Y+ ++
Sbjct: 538 AMFEEIKARRFV-PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYD 386
+ GK + Y++ ++ T + Y ++I LA+I ++ +FEE S + +
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 387 PRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
I + ++ + K G D+A ++++G PN +W +L + ++ I EAL C +
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 122/311 (39%), Gaps = 38/311 (12%)
Query: 135 RGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGALLNAYVRARMR 192
+ RF A +I + + K + F S+ + + D R Y +++ + +
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 193 GNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIW 252
A L+++M+ KG+ + Y ++ KI DE + E K K I L+V Y+
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 253 LSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRI 312
+ G G ++ + E + + K + PN T++++ +K ++ +A + ++
Sbjct: 664 IDGFGKVGRIDEAYLILEEL-MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 313 TGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGME 372
++V Y L++ V K + + W + + + Y MIS LA+ G+I
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA--- 779
Query: 373 KIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
+A A F+ GG P+S + + EG
Sbjct: 780 --------------------------------EAGALFDRFKANGGVPDSACYNAMIEGL 807
Query: 433 IRERRILEALS 443
R ++A S
Sbjct: 808 SNGNRAMDAFS 818
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 121/266 (45%), Gaps = 6/266 (2%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
++ L+ + + +A L+D+M+ + YNV + + K+ + D E+
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 238 KEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+ G++ D +Y + C + E +E +FE ++ ++ V P ++TM Y G
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVE-MFEHLEKNRRV-PCTYAYNTMIMGYGSAG 322
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVW-NLYRSVFPGVTNLGY 355
+ ++A L R ++ + + Y+ +L+ +GK +E +V+ + + P ++ Y
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST--Y 380
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +I L R G ++ ++ + + R N+M+ K D+A A F +
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 416 EGGKPNSTSWETLAEGHIRERRILEA 441
+ P+ ++ +L +G + R+ +A
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDA 466
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/200 (18%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
YG++++ + A +L ++ + K ++ + Y+ ++ + K+ DE ++ E+
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 238 KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQ 297
+KG+ ++Y++N L + + F+ MK K PN T+ + K+ +
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCT-PNQVTYGILINGLCKVRK 742
Query: 298 VEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHA 357
KA + ++ + + Y ++S G E +++ +++ + Y+A
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 358 MISSLARIGDIEGMEKIFEE 377
MI L+ +FEE
Sbjct: 803 MIEGLSNGNRAMDAFSLFEE 822
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 139/333 (41%), Gaps = 29/333 (8%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D +L+ AY R + +A + D++ + S+ +N M+ Y K E +
Sbjct: 156 DPHTAHSLITAYARCGLVASARKVFDEIPHRD----SVSWNSMIAGYAKAGCAREAVEVF 211
Query: 235 SEM-KEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
EM + G D S L +CG G E V E V++ + N S + +MY
Sbjct: 212 REMGRRDGFEPDEMSLVSLLGACGELGDLELGRWV-EGFVVERGMTLNSYIGSALISMYA 270
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNL 353
K G++E A RR+ + RD + ++ ++S Y G +E +++ + +
Sbjct: 271 KCGELESA----RRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKI 326
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKS-SYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
A++S+ A IG ++ + K +E+ S + +D +A ++ Y K G+ D A+ F
Sbjct: 327 TLTAVLSACATIGALD-LGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKD 385
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACE 472
+ ++ N SW + + EALS + + EG + RP + + AC
Sbjct: 386 MPQK----NEASWNAMISALAAHGKAKEALSLFQ-HMSDEGGGA-RPNDITFVGLLSACV 439
Query: 473 EESDMGSKEAFVALLRQPGYRKEKDYMSLIGLT 505
A L GYR +L GL
Sbjct: 440 H-----------AGLVDEGYRLFDMMSTLFGLV 461
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 86/208 (41%), Gaps = 14/208 (6%)
Query: 174 KDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM 233
+D + A+++ Y + M A LL M++ + + +++ I D + +
Sbjct: 288 RDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQI 347
Query: 234 VSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
++G + D++ + GS + + VF+ M N +++ M +
Sbjct: 348 DEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMP-----QKNEASWNAMISALA 402
Query: 294 KMGQVEKAEESLRRVESRITGR--DRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVT 351
G+ ++A + + G + + + LLS G +E YR++++ ++F V
Sbjct: 403 AHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVP 462
Query: 352 NL-GYHAMISSLARIGDIEGMEKIFEEW 378
+ Y M+ LAR G ++E W
Sbjct: 463 KIEHYSCMVDLLARAG------HLYEAW 484
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/367 (17%), Positives = 154/367 (41%), Gaps = 57/367 (15%)
Query: 150 LDLIAKVHGVASAEDFFLSLPDT---LKDRRVYGALLNAYVRARMRGNAELLIDKMRDKG 206
+D + K+ SA D + + + + +Y A++++ + +A+ L +M++KG
Sbjct: 226 VDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 207 YAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKME 266
YN M+ + + + E ++ EM E+ I DV +YN +++ +G + E
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAE 345
Query: 267 GVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSL 326
+++ M + + + PN T+S+M + K +++ AE + ++ + + ++ L+
Sbjct: 346 ELYDEM-LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 327 YGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLS------ 380
Y + ++ + + Y+ +I +GD+ + +E +S
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 381 ---------------------------------VKSSY-------DPRIANLMMSWYVKE 400
+ +S+ D + N+++S + E
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPK 460
G F +AE + + G P++ ++ ++ +G ++ R+ EA F + G+KS+ P
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ----MFDSMGSKSFSP- 579
Query: 461 PVNVINF 467
NV+ F
Sbjct: 580 --NVVTF 584
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 123/282 (43%), Gaps = 18/282 (6%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y AL+NA+V+ AE L D+M +G +++ Y+ M+ + K D E M
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383
Query: 235 SEMKEKGIRLDVYSYNIWLSS-CGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYI 293
M KG ++ ++N + CG++ + ME + E+ + + + TT++T+ +
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM--TETGLVADTTTYNTLIHGFY 441
Query: 294 KMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL----------- 342
+G + A + L+ + S D V LL GK ++ ++ +
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 343 --YRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKE 400
+ V P V Y+ +IS L G E+++EE D + M+ K+
Sbjct: 502 HPFNGVEPDVQT--YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 401 GNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
D+A F+S+ + PN ++ TL G+ + R+ + L
Sbjct: 560 SRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 99/214 (46%), Gaps = 8/214 (3%)
Query: 229 EVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTM 288
E ++ +M E R +V ++ ++ +G + + + M D + P T+ T+
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED-GLQPTQITYGTI 225
Query: 289 ATMYIKMGQVEKAEESLRRVE--SRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY--R 344
K+G A + LR++E S I + V Y ++ G+ + ++ +
Sbjct: 226 VDGMCKIGDTVSALDLLRKMEEISHII-PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 345 SVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFD 404
+FP + Y++MI G E++ +E L K S D N +++ +VKEG F
Sbjct: 285 GIFPDL--FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 405 KAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRI 438
+AE ++ ++ G PN+ ++ ++ +G ++ R+
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 109/259 (42%), Gaps = 10/259 (3%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEM 237
+ L+N R A L+D+M + G + Y ++ KI + ++ +M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKM 245
Query: 238 KE-KGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
+E I +V Y+ + S G + +F M+ +K + P+ T+++M + G
Sbjct: 246 EEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ-EKGIFPDLFTYNSMIVGFCSSG 304
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLG 354
+ AE+ L+ + R D V Y+ L++ + GK E +++ L R + P +
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP--NTIT 362
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFNS 412
Y +MI + ++ E +F +L P + N ++ Y D +
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMF--YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Query: 413 IIEEGGKPNSTSWETLAEG 431
+ E G ++T++ TL G
Sbjct: 421 MTETGLVADTTTYNTLIHG 439
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 37/188 (19%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN++++ + ++ E E + EM +GI D +Y+ + Q ++ +F+ M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
K+ +PN TF+T+ Y K G+V+ L L+ +G++
Sbjct: 574 -SKSFSPNVVTFTTLINGYCKAGRVDDG----------------------LELFCEMGRR 610
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDP-RIANL 392
V + Y +I ++G+I G IF+E +S D I N+
Sbjct: 611 GIVANA-------------ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 393 MMSWYVKE 400
+ + KE
Sbjct: 658 LTGLWSKE 665
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 11/260 (4%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D + L+N A L+D+M ++G+ PY ++ K+ + + +++
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGDTESALNLL 64
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
S+M+E I+ V YN + G + +F M DK + P+ T+S M + +
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH-DKGIFPDVITYSGMIDSFCR 123
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLY---GSVGKKEEVYRVWNLYRSVFPGVT 351
G+ AE+ LR + R D V + L++ G V + EE+Y L R +FP T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDM-LRRGIFP--T 180
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y++MI + + +++ + S S D + +++ Y K D F
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 412 SIIEEGGKPNSTSWETLAEG 431
+ G N+ ++ TL G
Sbjct: 241 EMHRRGIVANTVTYTTLIHG 260
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 122/277 (44%), Gaps = 5/277 (1%)
Query: 179 YGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMK 238
YG ++N + +A L+ KM + H + YN ++ K + +++ +EM
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 239 EKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQV 298
+KGI DV +Y+ + S G E + M +++ +NP+ TFS + +K G+V
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM-IERQINPDVVTFSALINALVKEGKV 162
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN--LYRSVFPGVTNLGYH 356
+AEE + R + Y+ ++ + + + R+ + +S P V +
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT--FS 220
Query: 357 AMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEE 416
+I+ + ++ +IF E + ++ + + G+ D A+ N +I
Sbjct: 221 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISS 280
Query: 417 GGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG 453
G PN +++++ ++ + +A + L+ +EG
Sbjct: 281 GVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEG 317
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 20/272 (7%)
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M E G R DV ++ ++ +G + L VD+ V + T+ KMG
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQ-----ALALVDRMVEEGHQPYGTIINGLCKMG 55
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLY-----RSVFPGVT 351
E A L ++E V Y+ ++ + K NL+ + +FP V
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIID---RLCKDGHHIHAQNLFTEMHDKGIFPDV- 111
Query: 352 NLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFN 411
+ Y MI S R G E++ + + + + D + +++ VKEG +AE +
Sbjct: 112 -ITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYG 170
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKA- 470
++ G P + ++ ++ +G ++ R+ +A K + +KS P V
Sbjct: 171 DMLRRGIFPTTITYNSMIDGFCKQDRLNDA----KRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 471 CEEESDMGSKEAFVALLRQPGYRKEKDYMSLI 502
C+ + E F + R+ Y +LI
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 38/330 (11%)
Query: 150 LDLIAKVHGVASAEDFF--LSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGY 207
+D + K H V A D +S+ + VY AL++ + + A+++ KM ++GY
Sbjct: 643 VDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGY 702
Query: 208 AVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEG 267
+ Y+ ++ K K D ++S M E +V Y + G T++
Sbjct: 703 GPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYR 762
Query: 268 VFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLY 327
+ +M+ +K +PN T++ M + K G+V+K E +R++ ++ + V Y L++
Sbjct: 763 LMSMME-EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHC 821
Query: 328 GSVGKKEEVYRVWN------------LYRSVFPG-----VTNLG---------------- 354
+ G ++ +++ + YR V G + +LG
Sbjct: 822 CAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPA 881
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKS--SYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
Y +I S + G +E ++ +E S S + D + + ++ DKA +
Sbjct: 882 YRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYAD 941
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+I+ GG P + + L +G IR R EAL
Sbjct: 942 MIKRGGIPELSIFFYLVKGLIRINRWEEAL 971
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 141/368 (38%), Gaps = 32/368 (8%)
Query: 172 TLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVE 231
+ D Y L++++ + + A D+M G A + + Y ++ Y+K ++
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570
Query: 232 SMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAV------------- 278
+ M +G +V +Y + G EK ++ M+ + +
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630
Query: 279 --NPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEV 336
+PN T+ + K +V++A + L + + + Y L+ + VGK +E
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690
Query: 337 YRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSW 396
V+ G Y ++I L + ++ K+ L + + I M+
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG 750
Query: 397 YVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKS 456
K G D+A + + E+G PN ++ + +G + ++ + L ++ GAK
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMR----QMGAKG 806
Query: 457 WRPKPVNVINFFKACEEESDMGSKEAFVALLRQ-------PGYRK-----EKDYMSLIGL 504
P V C + + ++Q GYRK ++++ +GL
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGL 866
Query: 505 TDEAVAEN 512
DE +AEN
Sbjct: 867 LDE-IAEN 873
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 40/271 (14%)
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESM-V 234
RR++ +L++AY R+ A L+ KM D G + YN+++ I +++ S+ V
Sbjct: 369 RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG---GICGNEKLPSLDV 425
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
E+ EK +Y L D V N S +A
Sbjct: 426 LELAEK-------AYGEML---------------------DAHVVLNKVNVSNLARCLCG 457
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRS--VFPGVTN 352
G+ EKA +R + S+ D Y ++ L + K + + ++ +S V P V
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDV-- 515
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL--MMSWYVKEGNFDKAEAFF 410
Y +I S ++G ++ K F+E V+ P + ++ Y+K A F
Sbjct: 516 FTYTILIDSFCKVGLLQQARKWFDEM--VRDGCAPNVVTYTALIHAYLKARKMSSANELF 573
Query: 411 NSIIEEGGKPNSTSWETLAEGHIRERRILEA 441
++ EG PN ++ L +GH + +I +A
Sbjct: 574 EMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 112/265 (42%), Gaps = 19/265 (7%)
Query: 198 LIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCG 257
+I +M KG+ + Y+ ++ L + D + EMK + DV++Y I + S
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 258 SQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDR 317
G ++ F+ M V PN T++ + Y+K ++ A E + S +
Sbjct: 527 KVGLLQQARKWFDEM-VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585
Query: 318 VPYHYLLSLYGSVGKKEEVYRVW------------NLYRSVFPGVTN----LGYHAMISS 361
V Y L+ + G+ E+ +++ ++Y + G Y A++
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIA-NLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
L + ++ + + +SV+ I + ++ + K G D+A+ F + E G P
Sbjct: 646 LCKAHKVKEARDLL-DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGP 704
Query: 421 NSTSWETLAEGHIRERRILEALSCL 445
N ++ +L + +++R+ AL L
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVL 729
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 53/304 (17%), Positives = 114/304 (37%), Gaps = 43/304 (14%)
Query: 163 EDFFLSLPDTLKDRRVYGALLNAYVRARMRG---NAELL-IDKMRDKGYAVHSLPYNVMM 218
E F + D +D+ + G LLN +R R N L + +++D GY L YN ++
Sbjct: 182 EQFLREIRD--EDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALV 239
Query: 219 TLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGS----------------- 261
++++ D + EM + G +D Y+ ++ G
Sbjct: 240 RVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDT 299
Query: 262 ---TEKMEGVFELMKVDKAVN-----------PNWTTFSTMATMYIKMGQVEKAEESLRR 307
T+ + G+ E ++A++ PN T+ + ++ Q+ + + L
Sbjct: 300 VIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSM 359
Query: 308 VESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMISS------ 361
+ + R ++ L+ Y G Y++ + Y+ +I
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 419
Query: 362 LARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKPN 421
L + +E EK + E L + + + G F+KA + ++ +G P+
Sbjct: 420 LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPD 479
Query: 422 STSW 425
++++
Sbjct: 480 TSTY 483
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 123/272 (45%), Gaps = 1/272 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y +N + G+A ++D M +G+ YN+++ K + +E + ++
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M ++G D+ ++N +++ + E+ + + V K V+P+ TF+ + K
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV-KGVSPDVYTFNILINALCK 403
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+G A +++ D V Y+ L+ S+GK + + S + +
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +I L + IE E++F++ S + N ++ K+ D A N +I
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
EG +PN+ ++ ++ + ++ I +A L+
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 127/289 (43%), Gaps = 9/289 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N + A+ ++++M D+G +N ++ +E +
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++ KG+ DVY++NI +++ G +FE MK + P+ T++T+
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK-NSGCTPDEVTYNTLIDNLCS 438
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN-- 352
+G++ KA + L+ +ES R + Y+ ++ + EE V++ + G++
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD--QMDLQGISRNA 496
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ ++ +I L + I+ ++ + +S + N +++ Y K+G+ KA +
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKP 461
+ G + + ++ TL G + R AL L+G K RP P
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM----RIKGMRPTP 601
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 115/262 (43%), Gaps = 1/262 (0%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
L+N Y + +A I + G+ + YN + + ++ M ++
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G DV++YNI ++ G E+ +G+ M VD+ P+ TTF+T+ ++E+
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM-VDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A + R+V + D ++ L++ VG R++ ++ + Y+ +I
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
+L +G + + ++ S N ++ K+ ++AE F+ + +G
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494
Query: 421 NSTSWETLAEGHIRERRILEAL 442
N+ ++ TL +G ++++I +A
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAF 516
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 132/271 (48%), Gaps = 11/271 (4%)
Query: 178 VYGALLNAYVRARMRGNA-ELLIDKMRDK-GYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
V + L++Y ++ +A +L++++++ G ++ YN ++ + ++ + +ES+ S
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM +GI+ DV ++N + + + E M + V P+ TTF+T+ +++
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMS-SRGVAPDETTFTTLMQGFVEE 229
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TNL 353
G +E A R+ +V + L++ Y +G+ E+ + + + + G +
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA--LGYIQQEIADGFEPDQI 287
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFN 411
Y+ ++ L + + K+ + + V+ +DP + N++++ K G ++A+ N
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMD--VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+++ G P+ T++ TL R+ EAL
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 6/260 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ G A L+ M G ++ YN ++ K +E E +
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMY 292
+M +GI + ++N + +K++ FEL+ + + + PN T++++ T Y
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKD---KKIDDAFELINQMISEGLQPNNITYNSILTHY 541
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K G ++KA + L + + D V Y L++ G+ + +V R T
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 601
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN-FDKAEAFFN 411
Y+ ++ SL R +I +F E V D ++ + G +A F
Sbjct: 602 KAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML 661
Query: 412 SIIEEGGKPNSTSWETLAEG 431
++++G P +S+ LAEG
Sbjct: 662 EMVDKGFIPEFSSFRMLAEG 681
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 134/327 (40%), Gaps = 9/327 (2%)
Query: 124 HALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGA 181
HAL+V D M G + + I ++ + K + A+ + D L D +
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYN--IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L+ A A L ++ KG + +N+++ K+ + + EMK G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-VDKAVNPNWT-TFSTMATMYIKMGQVE 299
D +YN + + S G K+ +L+K ++ P T T++T+ K ++E
Sbjct: 422 CTPDEVTYNTLIDNLCSLG---KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
+AEE +++ + R+ + ++ L+ K ++ + + N S N+ Y++++
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ + GDI+ I E + D +++ K G A + +G +
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598
Query: 420 PNSTSWETLAEGHIRERRILEALSCLK 446
P ++ + + R I +ALS +
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFR 625
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 48/122 (39%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG L+N +A A ++ MR KG YN ++ + + S+
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM E G D +Y I G K F L VDK P +++F +A +
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLN 684
Query: 295 MG 296
+G
Sbjct: 685 LG 686
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/402 (19%), Positives = 163/402 (40%), Gaps = 20/402 (4%)
Query: 101 GRSLTKWELC---RVVKELRK-FRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKV 156
G +LT + C +V+ + RR++ + + N G R DA ++ ++
Sbjct: 287 GTALTSRQYCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRI-----DAYQANQVLKQM 341
Query: 157 HGVASAEDFFLSL---PDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLP 213
+ +A FF L P D Y ++ RA+ G L+D+M G +++
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
YN ++ Y + +E ++ ++M+E G + D +Y + G + +++ M+
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 274 VDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKK 333
++P+ T+S + K G + A + + + + V Y+ ++ L+
Sbjct: 462 AG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNY 520
Query: 334 EEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLM 393
+ +++ ++ + Y ++ L G +E E +F E D + L+
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 394 MSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEG 453
+ + K GN +KA ++ +++ G +PN + +L +R +I EA L+ A
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL-- 638
Query: 454 AKSWRPKPVNVINFFKACEE---ESDMGSKEAFVALLRQPGY 492
RP C + + DMG +A P +
Sbjct: 639 --GLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAH 678
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 95/246 (38%), Gaps = 29/246 (11%)
Query: 118 KFRRYKHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDT--LKD 175
K R Y++AL++Y M N G F +I ++++ + AE F + + D
Sbjct: 516 KARNYQNALKLYRDMQNAG--FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 176 RRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
VYG L++ + +A A M G + N +++ ++++ + E ++
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVD-----------KAVNPNWTT 284
M G+R + +Y + LS C S M +LM A P+
Sbjct: 634 NMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGEN 693
Query: 285 FSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNL-- 342
A ++ + E E V++ ++ G+KEE VW +
Sbjct: 694 VRNHANNFLDLMHSEDRESKRGLVDA------------VVDFLHKSGQKEEAGSVWEVAA 741
Query: 343 YRSVFP 348
++VFP
Sbjct: 742 QKNVFP 747
>gi|414864365|tpg|DAA42922.1| TPA: hypothetical protein ZEAMMB73_846849 [Zea mays]
Length = 485
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 126/280 (45%), Gaps = 9/280 (3%)
Query: 157 HGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNV 216
H +A+ E D D + L++ ++R ++D+M G +S+ +N
Sbjct: 178 HALAAVEQM-KGAADCKPDGYTFSVLVDCCAKSRRFDLIPAVLDEMSYLGIECNSVIHNA 236
Query: 217 MMTLYMKIKEYDEVESMVSEMKEKGIRL-DVYSYNIWLSSCGSQGSTEKME---GVFELM 272
++ Y K ++E+E +S M E G + D+Y+ N + + G+ G T++ME F+LM
Sbjct: 237 IIDGYGKAAMFEEMEGALSTMLESGSNVPDIYTMNSVVGAYGNHGRTDEMEKSYSEFQLM 296
Query: 273 KVDKAVNPNWTTFSTMATMYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGK 332
V+ P+ TF+ M Y K G K R ++ R V ++ ++ +G G
Sbjct: 297 GVE----PDTKTFNIMIRSYGKAGMYVKMMSIFRYMKKRFFSPTAVTFNTVIECFGRAGD 352
Query: 333 KEEVYRVWNLYRSVFPGVTNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANL 392
E++ + L + + Y ++++ ++ G ++ + + + + D N
Sbjct: 353 IEKMEYYFRLMKIQGVKPNPITYCSLVNGYSKAGLLDKVAGVIRQTENTNVVLDTPFFNC 412
Query: 393 MMSWYVKEGNFDKAEAFFNSIIEEGGKPNSTSWETLAEGH 432
++S Y K G+ E + E+ KP+ ++ T+ + +
Sbjct: 413 VISAYAKSGDIKIMEEMLQLMKEKRCKPDRITYATMIQAY 452
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 20/255 (7%)
Query: 178 VYGALLNAYVRARMRGNAELLIDKMRDKGYA---VHSLPYNVMMTLYMKIKEYDEVESMV 234
VY AL+ AY + + +A +++M KG A ++V++ K + +D + +++
Sbjct: 162 VYTALIGAYGYSGLLEHALAAVEQM--KGAADCKPDGYTFSVLVDCCAKSRRFDLIPAVL 219
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM GI + +N + G E+MEG M + P+ T +++ Y
Sbjct: 220 DEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGALSTMLESGSNVPDIYTMNSVVGAYGN 279
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
G+ ++ E+S + D ++ ++ YG G ++ ++ + F T +
Sbjct: 280 HGRTDEMEKSYSEFQLMGVEPDTKTFNIMIRSYGKAGMYVKMMSIFRYMKKRFFSPTAVT 339
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEA------ 408
++ +I R GDIE ME F +P +++ Y K G DK
Sbjct: 340 FNTVIECFGRAGDIEKMEYYFRLMKIQGVKPNPITYCSLVNGYSKAGLLDKVAGVIRQTE 399
Query: 409 ---------FFNSII 414
FFN +I
Sbjct: 400 NTNVVLDTPFFNCVI 414
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 36/156 (23%)
Query: 214 YNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK 273
+N+M+ Y K Y ++ S+ MK++ ++N + G G EKME F LMK
Sbjct: 305 FNIMIRSYGKAGMYVKMMSIFRYMKKRFFSPTAVTFNTVIECFGRAGDIEKMEYYFRLMK 364
Query: 274 VDKAVNPNWTT-----------------------------------FSTMATMYIKMGQV 298
+ + V PN T F+ + + Y K G +
Sbjct: 365 I-QGVKPNPITYCSLVNGYSKAGLLDKVAGVIRQTENTNVVLDTPFFNCVISAYAKSGDI 423
Query: 299 EKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKE 334
+ EE L+ ++ + DR+ Y ++ Y + G E
Sbjct: 424 KIMEEMLQLMKEKRCKPDRITYATMIQAYTAHGMDE 459
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 144/331 (43%), Gaps = 15/331 (4%)
Query: 123 KHALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRR----- 177
+ A+E+++ M +R R S A ++ ++G AS L + ++ ++
Sbjct: 255 QKAVEIFERM----KRDRCQPSTAT--YTMLINLYGKASKSYMALKVFHEMRSQKCKPNI 308
Query: 178 -VYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSE 236
+ AL+NA+ R + AE + +++++ G YN +M Y + + S
Sbjct: 309 CTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSL 368
Query: 237 MKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMG 296
M+ G D SYNI + + G G E + VFE+MK + P + + + Y + G
Sbjct: 369 MQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMK-RLGITPTMKSHMLLLSAYSRAG 427
Query: 297 QVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWN-LYRSVFPGVTNLGY 355
+V K EE + ++ D + +L+LYG +G+ E++ V + + +P + Y
Sbjct: 428 KVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADIST-Y 486
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
+ +I+ R G ME++F + D + Y + +++ F +I+
Sbjct: 487 NILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMID 546
Query: 416 EGGKPNSTSWETLAEGHIRERRILEALSCLK 446
G P+ + + L +I E + ++
Sbjct: 547 AGCYPDGGTAKVLLSACSNGDQIQEVTTVIR 577
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 110/249 (44%), Gaps = 6/249 (2%)
Query: 180 GALLNAYVRARMRGN----AELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
+ NAY+ M+G A + ++M+ + Y +++ LY K + +
Sbjct: 238 AVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFH 297
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM+ + + ++ ++ +++ +G EK E +FE ++ + + P+ ++ + Y +
Sbjct: 298 EMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ-EAGLEPDVYAYNALMEAYSRA 356
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGY 355
G A E ++ DR Y+ ++ YG G E+ V+ + + + T +
Sbjct: 357 GFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSH 416
Query: 356 HAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIE 415
++S+ +R G + E+I + D + N M++ Y + G F+K E + +E
Sbjct: 417 MLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTA-ME 475
Query: 416 EGGKPNSTS 424
+G P S
Sbjct: 476 KGPYPADIS 484
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 117/312 (37%), Gaps = 34/312 (10%)
Query: 145 DAAIQLDLIAKVHGVASAEDFFLSLPDTLKDRRVYGALLNAYVRARMRGNAELLIDKMRD 204
+ A+QL L + + + L D Y L++AY + + AE ++ +
Sbjct: 137 NVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLE 196
Query: 205 KGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKGIRLDVYSYNIWLSSCGSQGSTEK 264
Y +++ Y ++ E++ +EM++ G YN ++ G T+K
Sbjct: 197 ARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQK 256
Query: 265 MEGVFELMKVDKA----------------------------------VNPNWTTFSTMAT 290
+FE MK D+ PN TF+ +
Sbjct: 257 AVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVN 316
Query: 291 MYIKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV 350
+ + G EKAEE +++ D Y+ L+ Y G +++L + +
Sbjct: 317 AFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEP 376
Query: 351 TNLGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFF 410
Y+ M+ + R G E + +FE + + + L++S Y + G K E
Sbjct: 377 DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIV 436
Query: 411 NSIIEEGGKPNS 422
N + + G KP++
Sbjct: 437 NQMHKSGIKPDT 448
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 123/272 (45%), Gaps = 1/272 (0%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D+ Y +N + G+A ++D M +G+ YN+++ K + +E + ++
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++M ++G D+ ++N +++ + E+ + + V K V+P+ TF+ + K
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV-KGVSPDVYTFNILINALCK 403
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLG 354
+G A +++ D V Y+ L+ S+GK + + S + +
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463
Query: 355 YHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSII 414
Y+ +I L + IE E++F++ S + N ++ K+ D A N +I
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523
Query: 415 EEGGKPNSTSWETLAEGHIRERRILEALSCLK 446
EG +PN+ ++ ++ + ++ I +A L+
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 127/289 (43%), Gaps = 9/289 (3%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y ++N + A+ ++++M D+G +N ++ +E +
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
++ KG+ DVY++NI +++ G +FE MK + P+ T++T+
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK-NSGCTPDEVTYNTLIDNLCS 438
Query: 295 MGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN-- 352
+G++ KA + L+ +ES R + Y+ ++ + EE V++ + G++
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD--QMDLQGISRNA 496
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNS 412
+ ++ +I L + I+ ++ + +S + N +++ Y K+G+ KA +
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556
Query: 413 IIEEGGKPNSTSWETLAEGHIRERRILEALSCLKGAFAAEGAKSWRPKP 461
+ G + + ++ TL G + R AL L+G K RP P
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM----RIKGMRPTP 601
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 115/262 (43%), Gaps = 1/262 (0%)
Query: 181 ALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEK 240
L+N Y + +A I + G+ + YN + + ++ M ++
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315
Query: 241 GIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKMGQVEK 300
G DV++YNI ++ G E+ +G+ M VD+ P+ TTF+T+ ++E+
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM-VDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 301 AEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMIS 360
A + R+V + D ++ L++ VG R++ ++ + Y+ +I
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 361 SLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGKP 420
+L +G + + ++ S N ++ K+ ++AE F+ + +G
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494
Query: 421 NSTSWETLAEGHIRERRILEAL 442
N+ ++ TL +G ++++I +A
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAF 516
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 132/271 (48%), Gaps = 11/271 (4%)
Query: 178 VYGALLNAYVRARMRGNA-ELLIDKMRDK-GYAVHSLPYNVMMTLYMKIKEYDEVESMVS 235
V + L++Y ++ +A +L++++++ G ++ YN ++ + ++ + +ES+ S
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 236 EMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIKM 295
EM +GI+ DV ++N + + + E M + V P+ TTF+T+ +++
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS-SRGVAPDETTFTTLMQGFVEE 229
Query: 296 GQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGV--TNL 353
G +E A R+ +V + L++ Y +G+ E+ + + + + G +
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA--LGYIQQEIADGFEPDQI 287
Query: 354 GYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIA--NLMMSWYVKEGNFDKAEAFFN 411
Y+ ++ L + + K+ + + V+ +DP + N++++ K G ++A+ N
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMD--VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345
Query: 412 SIIEEGGKPNSTSWETLAEGHIRERRILEAL 442
+++ G P+ T++ TL R+ EAL
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 6/260 (2%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D Y L++ G A L+ M G ++ YN ++ K +E E +
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK--VDKAVNPNWTTFSTMATMY 292
+M +GI + ++N + +K++ FEL+ + + + PN T++++ T Y
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKD---KKIDDAFELINQMISEGLQPNNITYNSILTHY 541
Query: 293 IKMGQVEKAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTN 352
K G ++KA + L + + D V Y L++ G+ + +V R T
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 601
Query: 353 LGYHAMISSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGN-FDKAEAFFN 411
Y+ ++ SL R +I +F E V D ++ + G +A F
Sbjct: 602 KAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML 661
Query: 412 SIIEEGGKPNSTSWETLAEG 431
++++G P +S+ LAEG
Sbjct: 662 EMVDKGFIPEFSSFRMLAEG 681
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 134/327 (40%), Gaps = 9/327 (2%)
Query: 124 HALEVYDWMNNRGERFRLSASDAAIQLDLIAKVHGVASAEDFFLSLPD--TLKDRRVYGA 181
HAL+V D M G + + I ++ + K + A+ + D L D +
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYN--IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 182 LLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMVSEMKEKG 241
L+ A A L ++ KG + +N+++ K+ + + EMK G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 242 IRLDVYSYNIWLSSCGSQGSTEKMEGVFELMK-VDKAVNPNWT-TFSTMATMYIKMGQVE 299
D +YN + + S G K+ +L+K ++ P T T++T+ K ++E
Sbjct: 422 CTPDEVTYNTLIDNLCSLG---KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 300 KAEESLRRVESRITGRDRVPYHYLLSLYGSVGKKEEVYRVWNLYRSVFPGVTNLGYHAMI 359
+AEE +++ + R+ + ++ L+ K ++ + + N S N+ Y++++
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538
Query: 360 SSLARIGDIEGMEKIFEEWLSVKSSYDPRIANLMMSWYVKEGNFDKAEAFFNSIIEEGGK 419
+ + GDI+ I E + D +++ K G A + +G +
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598
Query: 420 PNSTSWETLAEGHIRERRILEALSCLK 446
P ++ + + R I +ALS +
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFR 625
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 48/122 (39%)
Query: 175 DRRVYGALLNAYVRARMRGNAELLIDKMRDKGYAVHSLPYNVMMTLYMKIKEYDEVESMV 234
D YG L+N +A A ++ MR KG YN ++ + + S+
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624
Query: 235 SEMKEKGIRLDVYSYNIWLSSCGSQGSTEKMEGVFELMKVDKAVNPNWTTFSTMATMYIK 294
EM E G D +Y I G K F L VDK P +++F +A +
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLN 684
Query: 295 MG 296
+G
Sbjct: 685 LG 686
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,301,457,262
Number of Sequences: 23463169
Number of extensions: 338048237
Number of successful extensions: 1009465
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3397
Number of HSP's successfully gapped in prelim test: 4618
Number of HSP's that attempted gapping in prelim test: 944099
Number of HSP's gapped (non-prelim): 37546
length of query: 535
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 388
effective length of database: 8,910,109,524
effective search space: 3457122495312
effective search space used: 3457122495312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)