Query 009425
Match_columns 535
No_of_seqs 165 out of 1353
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 04:54:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009425.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009425hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9d_E T-complex protein 1 sub 100.0 4E-116 1E-120 941.8 52.2 531 4-534 21-559 (562)
2 3iyg_E T-complex protein 1 sub 100.0 7E-115 3E-119 925.8 59.7 512 22-533 4-515 (515)
3 3iyg_A T-complex protein 1 sub 100.0 7E-114 2E-118 920.1 59.6 507 22-532 4-527 (529)
4 3ruv_A Chaperonin, CPN; double 100.0 6E-114 2E-118 922.5 56.6 517 9-533 3-519 (543)
5 3iyg_G T-complex protein 1 sub 100.0 2E-113 5E-118 914.6 59.4 508 22-533 3-514 (515)
6 3ko1_A Chaperonin; 9-fold symm 100.0 2E-114 5E-119 926.5 51.1 518 9-533 13-533 (553)
7 1q3q_A Thermosome alpha subuni 100.0 1E-113 3E-118 921.5 55.7 519 8-533 5-525 (548)
8 3iyg_H T-complex protein 1 sub 100.0 3E-113 1E-117 911.2 58.3 505 22-533 5-514 (515)
9 1a6d_B Thermosome (beta subuni 100.0 1E-113 4E-118 921.0 54.9 518 9-533 4-523 (543)
10 3iyg_B T-complex protein 1 sub 100.0 2E-112 7E-117 905.7 58.9 504 22-533 4-511 (513)
11 3iyg_D T-complex protein 1 sub 100.0 2E-112 7E-117 906.4 57.8 507 22-533 5-518 (518)
12 1a6d_A Thermosome (alpha subun 100.0 4E-113 1E-117 916.1 52.4 514 11-533 7-522 (545)
13 3iyg_Z T-complex protein 1 sub 100.0 3E-112 9E-117 904.6 56.1 504 22-533 4-517 (517)
14 3p9d_A T-complex protein 1 sub 100.0 2E-112 7E-117 912.6 51.9 507 22-533 18-548 (559)
15 3p9d_G T-complex protein 1 sub 100.0 7E-113 2E-117 914.5 44.6 520 6-533 4-527 (550)
16 3p9d_D T-complex protein 1 sub 100.0 3E-113 9E-118 914.6 41.0 507 22-533 13-528 (528)
17 3p9d_C T-complex protein 1 sub 100.0 9E-112 3E-116 906.9 44.2 519 8-533 1-586 (590)
18 3p9d_F T-complex protein 1 sub 100.0 1E-111 3E-116 906.7 42.6 511 22-534 11-538 (546)
19 3iyg_Q T-complex protein 1 sub 100.0 2E-109 6E-114 884.1 58.5 504 22-532 4-511 (512)
20 3p9d_H T-complex protein 1 sub 100.0 2E-112 5E-117 914.9 35.0 525 1-533 1-548 (568)
21 3p9d_B T-complex protein 1 sub 100.0 2E-110 7E-115 894.0 39.1 504 22-533 11-518 (527)
22 3aq1_B Thermosome subunit; gro 100.0 1E-103 4E-108 835.8 43.4 473 56-533 1-476 (500)
23 1we3_A CPN60(groel); chaperoni 100.0 1.1E-95 4E-100 778.3 46.5 459 22-533 4-525 (543)
24 1kp8_A Groel protein; chaperon 100.0 9.6E-96 3E-100 777.5 41.5 457 22-533 4-523 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 1.7E-96 6E-101 783.9 31.0 458 22-533 5-525 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 8.2E-95 2.8E-99 768.0 34.9 457 21-533 3-521 (546)
27 1gml_A T-complex protein 1 sub 100.0 2.7E-38 9.3E-43 289.1 18.4 173 215-389 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 2.7E-33 9.4E-38 250.8 13.8 154 221-376 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 99.4 8.8E-13 3E-17 117.6 8.3 144 218-403 2-169 (194)
30 1srv_A Protein (groel (HSP60 c 99.3 1.1E-12 3.6E-17 111.7 6.5 121 223-372 1-144 (145)
31 3osx_A 60 kDa chaperonin; alph 99.3 4.6E-12 1.6E-16 113.3 7.6 140 222-403 13-176 (201)
32 1o13_A Probable NIFB protein; 72.1 9.2 0.00031 32.1 6.8 52 284-336 68-119 (136)
33 2yx6_A Hypothetical protein PH 69.1 12 0.00039 30.6 6.7 53 283-336 54-106 (121)
34 2wfb_A Putative uncharacterize 63.6 14 0.00049 29.9 6.2 51 284-335 59-110 (120)
35 1eo1_A Hypothetical protein MT 62.7 16 0.00055 29.8 6.4 52 284-336 57-108 (124)
36 2re2_A Uncharacterized protein 57.8 23 0.00079 29.6 6.5 52 283-336 70-121 (136)
37 1rdu_A Conserved hypothetical 52.4 18 0.00061 29.1 4.8 52 284-336 54-105 (116)
38 2qtd_A Uncharacterized protein 47.7 47 0.0016 26.0 6.6 48 286-335 50-97 (105)
39 2xzm_U Ribosomal protein L7AE 39.2 83 0.0028 25.8 6.9 50 283-335 31-85 (126)
40 2lbw_A H/ACA ribonucleoprotein 36.0 94 0.0032 25.2 6.8 50 283-335 27-81 (121)
41 3v7q_A Probable ribosomal prot 32.6 1.2E+02 0.0041 23.6 6.6 50 284-336 27-80 (101)
42 3v7e_A Ribosome-associated pro 31.3 84 0.0029 23.4 5.3 50 283-335 18-71 (82)
43 3psh_A Protein HI_1472; substr 31.1 97 0.0033 29.5 7.2 52 285-336 77-154 (326)
44 3on1_A BH2414 protein; structu 28.8 1.2E+02 0.004 23.6 5.9 51 283-336 25-79 (101)
45 2ale_A SNU13, NHP2/L7AE family 27.4 82 0.0028 26.1 5.0 49 284-335 40-93 (134)
46 3md9_A Hemin-binding periplasm 25.5 1.4E+02 0.0049 27.0 7.0 52 285-336 52-111 (255)
47 3oak_C Transcription elongatio 25.4 50 0.0017 19.8 2.3 23 82-105 2-24 (31)
48 4a18_G RPL30; ribosome, eukary 25.0 1.7E+02 0.0057 22.9 6.3 50 283-335 29-83 (104)
49 2wi8_A Iron-uptake system-bind 25.0 1.3E+02 0.0045 28.4 6.9 52 285-336 89-144 (311)
50 2q8p_A Iron-regulated surface 24.8 75 0.0026 29.1 4.9 51 285-335 53-109 (260)
51 3iz5_f 60S ribosomal protein L 24.6 1.8E+02 0.0063 23.1 6.5 50 283-335 33-87 (112)
52 1vq8_F 50S ribosomal protein L 24.2 1.7E+02 0.0059 23.4 6.4 49 284-335 37-90 (120)
53 2r79_A Periplasmic binding pro 24.2 1.6E+02 0.0054 27.3 7.1 51 285-335 52-110 (283)
54 1xbi_A 50S ribosomal protein L 23.3 1.4E+02 0.0049 24.0 5.7 49 284-335 37-90 (120)
55 2aif_A Ribosomal protein L7A; 22.3 1.4E+02 0.0047 24.7 5.5 49 284-335 49-102 (135)
56 2pw9_A Putative formate dehydr 22.0 78 0.0027 29.7 4.3 40 283-322 206-245 (268)
57 2r7a_A Bacterial heme binding 22.0 1.5E+02 0.0053 26.8 6.5 51 285-335 52-111 (256)
58 4hb7_A Dihydropteroate synthas 21.9 1.6E+02 0.0054 27.6 6.3 62 275-338 64-129 (270)
59 2fc3_A 50S ribosomal protein L 21.4 1.8E+02 0.0063 23.4 6.0 49 284-335 36-89 (124)
60 1n2z_A Vitamin B12 transport p 20.4 1.1E+02 0.0039 27.5 5.1 50 285-334 50-106 (245)
61 2etv_A Iron(III) ABC transport 20.4 1.3E+02 0.0045 29.0 5.8 51 285-335 89-150 (346)
62 3o85_A Ribosomal protein L7AE; 20.2 2E+02 0.007 23.2 6.0 49 284-335 39-92 (122)
No 1
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=3.9e-116 Score=941.77 Aligned_cols=531 Identities=56% Similarity=0.964 Sum_probs=497.4
Q ss_pred cccccCCceEEeecchhhhhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHH
Q 009425 4 AFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI 83 (535)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~ 83 (535)
.++.+++|..++.++..+++.+|.+++.+|+.||..|+++|||||||+||+|||+++.|+++|||||+||||+|+++||+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~ 100 (562)
T 3p9d_E 21 AQDEMGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEI 100 (562)
T ss_dssp ---------CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHH
T ss_pred HHHhcCCCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHH
Confidence 34455678777766644467789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCCh--hHH
Q 009425 84 AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL--EPL 161 (535)
Q Consensus 84 ~~ll~~~~~~~~~~~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~--~~l 161 (535)
|+|++++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++.+.++. +.|
T Consensus 101 Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L 180 (562)
T 3p9d_E 101 AKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFL 180 (562)
T ss_dssp HHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHH
T ss_pred HHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998887543233 789
Q ss_pred HHHHHHHhccccchhhhhHHHHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCccc--
Q 009425 162 VQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRI-- 239 (535)
Q Consensus 162 ~~ia~tsl~sk~~~~~~~~la~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~-- 239 (535)
.++|+||++||+++.+.++|++++++|+..+.+...+.+|+++|+|+++.|++++||++++|++|++++.||+||+++
T Consensus 181 ~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m~~~~~~ 260 (562)
T 3p9d_E 181 LRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLP 260 (562)
T ss_dssp HHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSCCC----
T ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCcCccccc
Confidence 999999999999999999999999999999876544578889999999999999999999999999999999999999
Q ss_pred ----ccceEEEEecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCC
Q 009425 240 ----ENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNL 315 (535)
Q Consensus 240 ----~~~kI~ll~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I 315 (535)
+++||++++|||++++.+.++++.++++++++.+.++|+++++++++++.+.|+||||++++|++.+++||.++||
T Consensus 261 ~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I 340 (562)
T 3p9d_E 261 KEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDL 340 (562)
T ss_dssp -TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTC
T ss_pred ccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEeecChhHHHHHHHHhCCeeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHH
Q 009425 316 PAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETK 395 (535)
Q Consensus 316 ~~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~ 395 (535)
++++++++.+|+|||++|||+++++++++++++||+|+.|+++++|++++++++|++|++++.|||+|||+|+.+++|+|
T Consensus 341 ~~v~~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~k 420 (562)
T 3p9d_E 341 PAVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAE 420 (562)
T ss_dssp CCEECCCTTTHHHHHHHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHT
T ss_pred EEEeccCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999985568999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCCeEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHH
Q 009425 396 RSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKN 475 (535)
Q Consensus 396 ~~l~dal~~~~~~l~~g~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~ 475 (535)
|+++|||+++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++
T Consensus 421 r~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~ 500 (562)
T 3p9d_E 421 RALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKS 500 (562)
T ss_dssp HHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcEeeecCCCcccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCCC
Q 009425 476 QQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 534 (535)
Q Consensus 476 ~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~~ 534 (535)
.|...++.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.+.+
T Consensus 501 ~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 559 (562)
T 3p9d_E 501 KQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGK 559 (562)
T ss_dssp HHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC
T ss_pred HHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99865667899999999999999999999999999999999999999999999998764
No 2
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.5e-115 Score=925.80 Aligned_cols=512 Identities=69% Similarity=1.102 Sum_probs=493.9
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcCCC
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDG 101 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDG 101 (535)
++.+|.++|.+|+.||..|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++|||
T Consensus 4 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GDG 83 (515)
T 3iyg_E 4 SRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDG 83 (515)
T ss_pred hhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhccccchhhhhHH
Q 009425 102 TTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRL 181 (535)
Q Consensus 102 ttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~~~~l 181 (535)
|||++|||++||+++.+++.+|+||+.|++||++|++.++++|++++++++.+..+++.|.++|+||++||.++.+.++|
T Consensus 84 TTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l 163 (515)
T 3iyg_E 84 TTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQM 163 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999888654446789999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEEEecCCCCCCCCCcce
Q 009425 182 AEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHK 261 (535)
Q Consensus 182 a~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~~~l~~~~~~~~~~ 261 (535)
++++++|+..+.+..+..+|+++|+|++++|+++.||++++|++|++++.||+||+++++|||++++|||++++++.+++
T Consensus 164 ~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~ 243 (515)
T 3iyg_E 164 AEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHK 243 (515)
T ss_pred HHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccCCCceEEEEcCccccccccccce
Confidence 99999999999765444678899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCeeccCC
Q 009425 262 VDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRF 341 (535)
Q Consensus 262 v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~~ 341 (535)
+.++++++++.+.++|+++++++++++.+.|+||||++++|++.|++||.++||++++++++.+|+|||++|||++++++
T Consensus 244 ~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa~ii~~l 323 (515)
T 3iyg_E 244 LDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGRIVPRF 323 (515)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCChH
Q 009425 342 QELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAA 421 (535)
Q Consensus 342 ~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~~ 421 (535)
+++++++||+|+.|+++++|++++++++|++|++++.|||+|||+|+.+++|+||+++|||+++|+++++|++|||||++
T Consensus 324 ~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~ 403 (515)
T 3iyg_E 324 SELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAA 403 (515)
T ss_pred ccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHH
Confidence 99999999999999999998656899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCCcccccccCC
Q 009425 422 EIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQN 501 (535)
Q Consensus 422 e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~g 501 (535)
|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|...++.++|||+.+|++.||++.|
T Consensus 404 e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~g 483 (515)
T 3iyg_E 404 EISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQH 483 (515)
T ss_pred HHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhcc
Confidence 99999999999988899999999999999999999999999999999999999999755567899999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 502 VFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 502 I~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
||||+.||+++|++|+++|++|||||++|.++
T Consensus 484 I~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 515 (515)
T 3iyg_E 484 VIETLIGKKQQISLATQMVRMILKIDDIRKPG 515 (515)
T ss_pred CEEcHHHHHHHHHHHHHHHHHHHhHHHhhcCC
Confidence 99999999999999999999999999999863
No 3
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7e-114 Score=920.13 Aligned_cols=507 Identities=33% Similarity=0.475 Sum_probs=485.1
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcCCC
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDG 101 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDG 101 (535)
++.+|.++|.+|+.||..|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 4 ~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GDG 83 (529)
T 3iyg_A 4 DRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDG 83 (529)
T ss_pred chhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCCC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHh-hhccccCCCCChhHHHHHHHHHhccccchhhhhH
Q 009425 102 TTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLER-IAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRR 180 (535)
Q Consensus 102 ttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~-~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~~~~ 180 (535)
|||+||||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++. .+++.|.++|+||++||+.++++++
T Consensus 84 TTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~--~~~e~l~~va~tsl~sK~~~~~~~~ 161 (529)
T 3iyg_A 84 TTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDE--LGRDCLINAAKTSMSSKVIGINGDF 161 (529)
T ss_pred hhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCC--CCHHHHHHHHHHHhccCcccccHHH
Confidence 999999999999999999999999999999999999999999998 8887753 3678999999999999999999999
Q ss_pred HHHHHHHHHHHhhhh---hcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEEEecCCCCCCCC
Q 009425 181 LAEIAVKAVLAVADL---ERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPK 257 (535)
Q Consensus 181 la~l~~~a~~~~~~~---~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~~~l~~~~~~ 257 (535)
|++++++|+..+++. ....+|.++|+|++..|+++.||++++|++|++++.|++||++++||||++++|+|++++++
T Consensus 162 i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le~~k~e 241 (529)
T 3iyg_A 162 FANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMK 241 (529)
T ss_pred HHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCcccCCceEEEecCCccccccc
Confidence 999999999999742 22357778899999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCee
Q 009425 258 TKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRI 337 (535)
Q Consensus 258 ~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~i 337 (535)
.++++.+++++++..+.++|++++++++++|.+.|+||||++++|++.+++||.++||++++++++++|+|||++|||++
T Consensus 242 ~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tGa~i 321 (529)
T 3iyg_A 242 LGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATV 321 (529)
T ss_pred CCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHhCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCC------CCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhC
Q 009425 338 VPRFQELT------PEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRN 411 (535)
Q Consensus 338 i~~~~~l~------~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~ 411 (535)
++++++++ +++||+|+.|+++++|. ++|++|++|++++.|||+|||+|+.+++|.||+++|||+++|+++++
T Consensus 322 v~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~--~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~ 399 (529)
T 3iyg_A 322 LSTLANLEGEETFEASMLGQAEEVVQERICD--DELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLES 399 (529)
T ss_pred ecchhcccchhccChhhCccceEEEEEEeCC--ceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99987664 57899999999999986 89999999999999999999999999999999999999999999999
Q ss_pred CeEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcC-------CCc
Q 009425 412 NSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIREN-------NPN 484 (535)
Q Consensus 412 g~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~-------~~~ 484 (535)
|++|||||++|++++.+|++++.+.++++|+++++||+||+.||++|++|||+|+.+++.+|++.|...+ ..+
T Consensus 400 ~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~ 479 (529)
T 3iyg_A 400 KSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW 479 (529)
T ss_pred CeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCce
Confidence 9999999999999999999999999999999999999999999999999999999999999999997322 167
Q ss_pred EeeecCCCcccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 009425 485 CGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISP 532 (535)
Q Consensus 485 ~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~ 532 (535)
+|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..
T Consensus 480 ~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 527 (529)
T 3iyg_A 480 IGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKL 527 (529)
T ss_pred eeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcC
Confidence 999999999999999999999999999999999999999999999975
No 4
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=5.7e-114 Score=922.49 Aligned_cols=517 Identities=41% Similarity=0.642 Sum_probs=495.6
Q ss_pred CCceEEeecchhhhhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHH
Q 009425 9 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMV 88 (535)
Q Consensus 9 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~ 88 (535)
++| .+++++. ++.+|.+++.+|+.||+.|+++|||||||+||+|||+++.|+++|||||+||||+|+++||+|+|++
T Consensus 3 ~~p-~~l~~~~--~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~ 79 (543)
T 3ruv_A 3 QQP-GVLPENM--KRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLI 79 (543)
T ss_dssp -CC-CSSCSSE--EEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHH
T ss_pred CCC-eeecCCc--chhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHH
Confidence 467 6667654 5788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhcCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHH
Q 009425 89 ELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTT 168 (535)
Q Consensus 89 ~~~~~~~~~~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~ts 168 (535)
++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++. .+.+.|.++|+||
T Consensus 80 e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~--~d~~~L~~va~ts 157 (543)
T 3ruv_A 80 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGA--QDKEILTKIAMTS 157 (543)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCT--TCHHHHHHHHHHH
T ss_pred HHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCC--CCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988763 3788999999999
Q ss_pred hccccchhhhhHHHHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEEEe
Q 009425 169 LNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILT 248 (535)
Q Consensus 169 l~sk~~~~~~~~la~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~ 248 (535)
++||+.++++++|++++++|+.++++. ...+|+++|+|++..|+++.||++++|++|++++.|++||+.++||||++++
T Consensus 158 l~sK~~~~~~~~i~~livdAv~~V~~~-~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~ 236 (543)
T 3ruv_A 158 ITGKGAEKAKEKLAEIIVEAVSAVVDD-EGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLN 236 (543)
T ss_dssp HHHTCGGGCCHHHHHHHHHHHHHHCCT-TSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEES
T ss_pred hcccccchhHHHHHHHHHHHHHHhhcc-CCCcccceEEEEEcCCCCcccceeecceEEeccccCccccccccCcEEEEEc
Confidence 999999999999999999999999864 2247888999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHH
Q 009425 249 CPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELEL 328 (535)
Q Consensus 249 ~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ 328 (535)
++|+++++++++++.+++++++..+.++|+++++++++++.+.|+||||++++|++.+++||.++||++++++++.+|+|
T Consensus 237 ~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ 316 (543)
T 3ruv_A 237 CAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEK 316 (543)
T ss_dssp SCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHH
T ss_pred ccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Q 009425 329 IAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNL 408 (535)
Q Consensus 329 ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~ 408 (535)
||++|||+++++++++++++||+|+.|+++++|. +++++|++|+++..|||+|||+|+.+++|+||+++|||+++|++
T Consensus 317 ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~--~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a 394 (543)
T 3ruv_A 317 LAKATGANVIAAIAALSAQDLGDAGLVEERKISG--DSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCT 394 (543)
T ss_dssp HHHHHCCCEESCGGGCCGGGCEEEEEEEEEEETT--EEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCceecccccCCHHHCCcccEEEEEEeCC--ceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999986 88999999999999999999999999999999999999999999
Q ss_pred hhCCeEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeee
Q 009425 409 IRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGID 488 (535)
Q Consensus 409 l~~g~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid 488 (535)
+++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|...++.++|||
T Consensus 395 v~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d 474 (543)
T 3ruv_A 395 IEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLN 474 (543)
T ss_dssp HHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEEC
T ss_pred HhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeee
Confidence 99999999999999999999999998899999999999999999999999999999999999999998853456789999
Q ss_pred cCCCcccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 489 CNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 489 ~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
+.+|++.||++.|||||+.||+++|++|+++|++|||||++|...
T Consensus 475 ~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~ 519 (543)
T 3ruv_A 475 VFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAE 519 (543)
T ss_dssp TTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecC
Confidence 999999999999999999999999999999999999999999754
No 5
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-113 Score=914.59 Aligned_cols=508 Identities=34% Similarity=0.572 Sum_probs=486.4
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcCCC
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDG 101 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDG 101 (535)
++.+|.+++.+|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 3 ~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDG 82 (515)
T 3iyg_G 3 KRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDG 82 (515)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhccccchhhhhHH
Q 009425 102 TTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRL 181 (535)
Q Consensus 102 ttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~~~~l 181 (535)
|||+|+||++||+++.+++++|+||+.|++||++|++.++++|++++++++. .+++.|.++|+|+++||.++++.+++
T Consensus 83 TTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~--~~~~~l~~va~tsl~sK~i~~~~~~~ 160 (515)
T 3iyg_G 83 TTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDT--SNRDTMLNIINSSITTKVISRWSSLA 160 (515)
T ss_pred hhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCC--CCHHHHHHHHHHHhcCCchhhHHHHH
Confidence 9999999999999999999999999999999999999999999999988763 35789999999999999999999999
Q ss_pred HHHHHHHHHHhhhh-h-cCCCCcc-ceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEEEecCCCCCCCCC
Q 009425 182 AEIAVKAVLAVADL-E-RKDVNLD-LIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKT 258 (535)
Q Consensus 182 a~l~~~a~~~~~~~-~-~~~~~~~-~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~~~l~~~~~~~ 258 (535)
++++++|+..+.+. . ...+|++ +|+|++++||+++||++++|++|++++.|+.||+.++||||++++|||+++++++
T Consensus 161 ~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~ 240 (515)
T 3iyg_G 161 CNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES 240 (515)
T ss_pred HHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEccccccccccc
Confidence 99999999988732 2 2235555 4999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCeec
Q 009425 259 KHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIV 338 (535)
Q Consensus 259 ~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii 338 (535)
++++.+++++++..+.++|+++++++++++.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||+++
T Consensus 241 ~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tGa~ii 320 (515)
T 3iyg_G 241 QTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIV 320 (515)
T ss_pred CceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhCCeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcee-eeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeEEeC
Q 009425 339 PRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYG 417 (535)
Q Consensus 339 ~~~~~l~~~~lG~-~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpG 417 (535)
+++++++++.||+ |+.|++.++|+ ++|+||+||+++..|||+|||+|+.+++|+||+++|||+++|++++++++|||
T Consensus 321 ~~l~~l~~~~LG~~a~~v~~~~~g~--~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpG 398 (515)
T 3iyg_G 321 SRPEELREEDVGTGAGLLEIKKIGD--EYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPG 398 (515)
T ss_pred ccccccChhhcCCcccEEEEEEECC--ceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeC
Confidence 9999999999999 99999999986 89999999999999999999999999999999999999999999999999999
Q ss_pred CChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCCccccc
Q 009425 418 GGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDM 497 (535)
Q Consensus 418 GG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~~i~d~ 497 (535)
||++|++++.+|++++++.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|...++.++|||+.+|++.||
T Consensus 399 GGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~ 478 (515)
T 3iyg_G 399 GGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDM 478 (515)
T ss_pred CCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999975445689999999999999
Q ss_pred ccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 498 REQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 498 ~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
++.|||||+.||+++|++|+|+|++|||||++|...
T Consensus 479 ~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 479 KELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred HHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 999999999999999999999999999999999754
No 6
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.6e-114 Score=926.50 Aligned_cols=518 Identities=39% Similarity=0.642 Sum_probs=485.6
Q ss_pred CCceEEeecchhhhhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHH
Q 009425 9 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMV 88 (535)
Q Consensus 9 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~ 88 (535)
++|..+++++. ++.+|.+++.+|+.||+.|+++|||||||+||+|||+++.|+++|||||+||||+|+++||+|+|++
T Consensus 13 ~~~~~~l~~~~--~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~ 90 (553)
T 3ko1_A 13 GIPVIILKEGS--SRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLV 90 (553)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHH
T ss_pred CCeEEEEecCc--ccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHH
Confidence 56888888765 6789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhcCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHH
Q 009425 89 ELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTT 168 (535)
Q Consensus 89 ~~~~~~~~~~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~ts 168 (535)
++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++. .+++.|.++|+||
T Consensus 91 e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~--~d~e~L~~vA~ts 168 (553)
T 3ko1_A 91 QIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSI--NDTDLLRKIAMTS 168 (553)
T ss_dssp HHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCT--TCHHHHHHHHHHH
T ss_pred HHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCC--CcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988753 3788999999999
Q ss_pred hccccchhhhhHHHHHHHHHHHHhhhhh--cCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEE
Q 009425 169 LNSKMVNRCKRRLAEIAVKAVLAVADLE--RKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAI 246 (535)
Q Consensus 169 l~sk~~~~~~~~la~l~~~a~~~~~~~~--~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~l 246 (535)
++||+.++++++|++++++|+.++++.. ...+|+++|+|++..|+++.||++++|++|++++.|++||+.++||||++
T Consensus 169 l~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll 248 (553)
T 3ko1_A 169 LSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIAL 248 (553)
T ss_dssp HTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCEEEE
T ss_pred hhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCccccccceEEE
Confidence 9999999999999999999999998642 13488899999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHH
Q 009425 247 LTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVEL 326 (535)
Q Consensus 247 l~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L 326 (535)
++++|+++++++++++.+++++++..+.++|+++++++++++.+.|+||||++++|++.+++||.++||++++++++.+|
T Consensus 249 ~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~l 328 (553)
T 3ko1_A 249 IDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDL 328 (553)
T ss_dssp ECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHH
T ss_pred ecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHH
Q 009425 327 ELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVAR 406 (535)
Q Consensus 327 ~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~ 406 (535)
+|||++|||+++++++++++++||+|+.|+++++|. ++|+||++|+++..|||+|||+|+.+++|+||+++|||+++|
T Consensus 329 eria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~--d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r 406 (553)
T 3ko1_A 329 EKLARATGGRVVSNIDEISEQDLGYASLIEERKVGE--DKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVA 406 (553)
T ss_dssp HHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSS--SCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCeeecccccCChhhcchHHHHHHhhcCc--ceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999986 889999999999999999999999999999999999999999
Q ss_pred HHhhCCeEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC-CcE
Q 009425 407 NLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENN-PNC 485 (535)
Q Consensus 407 ~~l~~g~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~-~~~ 485 (535)
+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. .++ .++
T Consensus 407 ~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~-~~~~~~~ 485 (553)
T 3ko1_A 407 DVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHE-NENNKWY 485 (553)
T ss_dssp HHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTC-SGGGTTE
T ss_pred HHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhh-CcCCceE
Confidence 999999999999999999999999999888999999999999999999999999999999999999999886 333 789
Q ss_pred eeecCCCcccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 486 GIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 486 Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
|||+.+|++.||++.|||||+.||+++|++|+++|++|||||++|...
T Consensus 486 G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 533 (553)
T 3ko1_A 486 GIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAG 533 (553)
T ss_dssp EEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC-
T ss_pred eEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhh
Confidence 999999999999999999999999999999999999999999999764
No 7
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1e-113 Score=921.55 Aligned_cols=519 Identities=41% Similarity=0.646 Sum_probs=494.7
Q ss_pred cCCceEEeecchhhhhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHH
Q 009425 8 FGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLM 87 (535)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll 87 (535)
|++|..+++++. ++.+|.+++.+|+.||.+|+++|||||||+||+|||+++.|+++|||||+||||+|+++||+|+|+
T Consensus 5 ~~~~~~~l~~~~--~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll 82 (548)
T 1q3q_A 5 SGQPVVILPEGT--QRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMM 82 (548)
T ss_dssp ----CCCSCTTC--EEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHH
T ss_pred CCCCcccccCCc--ceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHH
Confidence 356766666653 578899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHH
Q 009425 88 VELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMT 167 (535)
Q Consensus 88 ~~~~~~~~~~~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~t 167 (535)
+++|++||+++||||||+++||++||+++.+++++|+||+.|++||++|++.++++|++++++++. .+.+.|.++|+|
T Consensus 83 ~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~--~d~~~l~~va~t 160 (548)
T 1q3q_A 83 VEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDP--DDEETLLKIAAT 160 (548)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCT--TCHHHHHHHHHH
T ss_pred HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCC--CCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988763 368899999999
Q ss_pred HhccccchhhhhHHHHHHHHHHHHhhhhh--cCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEE
Q 009425 168 TLNSKMVNRCKRRLAEIAVKAVLAVADLE--RKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIA 245 (535)
Q Consensus 168 sl~sk~~~~~~~~la~l~~~a~~~~~~~~--~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ 245 (535)
+++||+.++++++|++++++|+.++++.. ...+|.++|+|++++|++++||++++|++|++++.|++||++++||||+
T Consensus 161 sl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIl 240 (548)
T 1q3q_A 161 SITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIA 240 (548)
T ss_dssp HSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEE
T ss_pred HhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEE
Confidence 99999999999999999999999998542 2357888999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhH
Q 009425 246 ILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVE 325 (535)
Q Consensus 246 ll~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~ 325 (535)
+++++|++++++.++++.++++++++.+.++|+++++++++++.+.|+||||++++|++.|++||.++||++++++++++
T Consensus 241 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~ 320 (548)
T 1q3q_A 241 LINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSD 320 (548)
T ss_dssp EECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHH
T ss_pred EEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCeeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHH
Q 009425 326 LELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVA 405 (535)
Q Consensus 326 L~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~ 405 (535)
|+|||++|||+++++++++++++||+|+.|++.++|. ++|++|++|++++.|||+|||+|+.+++|+||+++|||+++
T Consensus 321 le~ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~--~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~ 398 (548)
T 1q3q_A 321 MEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAG--ENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVV 398 (548)
T ss_dssp HHHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETT--EEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEecccccCCHHHCCCceEEEEEEecC--ceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999986 89999999999999999999999999999999999999999
Q ss_pred HHHhhCCeEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcE
Q 009425 406 RNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNC 485 (535)
Q Consensus 406 ~~~l~~g~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~ 485 (535)
|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. .++.++
T Consensus 399 r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~-~~~~~~ 477 (548)
T 1q3q_A 399 KDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHK-NRGLGI 477 (548)
T ss_dssp HHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHH-HHCTTE
T ss_pred HHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhh-cCCCCc
Confidence 9999999999999999999999999998878889999999999999999999999999999999999999886 355689
Q ss_pred eeecCCCcccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 486 GIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 486 Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
|||..+|++.||.+.|||||+.||+++|++|+|+|++|||||++|...
T Consensus 478 G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~ 525 (548)
T 1q3q_A 478 GIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAK 525 (548)
T ss_dssp EEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred ceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999764
No 8
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.3e-113 Score=911.15 Aligned_cols=505 Identities=31% Similarity=0.516 Sum_probs=485.5
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcCCC
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDG 101 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDG 101 (535)
++.+|.+++.+||.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 5 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GDG 84 (515)
T 3iyg_H 5 DSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDG 84 (515)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhceeCcc
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCC--hhHHHHHHHHHhccccchhhhh
Q 009425 102 TTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND--LEPLVQTCMTTLNSKMVNRCKR 179 (535)
Q Consensus 102 ttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~--~~~l~~ia~tsl~sk~~~~~~~ 179 (535)
|||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++.+..+ ++.|.++|+|+++||+++.+++
T Consensus 85 TTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~ 164 (515)
T 3iyg_H 85 TTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKA 164 (515)
T ss_pred hhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHH
Confidence 99999999999999999999999999999999999999999999999887532111 6788999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCC---CcccccceEEEEecCCCCCCC
Q 009425 180 RLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQM---PKRIENAKIAILTCPFEPPKP 256 (535)
Q Consensus 180 ~la~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~---~~~~~~~kI~ll~~~l~~~~~ 256 (535)
+|++++++|+.+++ +.+|++.|+|+++.||+..||++++|++|++++.||+| |+.++||||++++++|+++++
T Consensus 165 ~i~~livdAv~~V~----~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 165 FFAKMVVDAVMMLD----DLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAE 240 (515)
T ss_pred HHHHHHHHHHHHhc----ccCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEccccccccc
Confidence 99999999999986 25788899999999999999999999999999999976 788999999999999999999
Q ss_pred CCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCe
Q 009425 257 KTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGR 336 (535)
Q Consensus 257 ~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 336 (535)
++++++.++++++++.+.++|+++++++++++.+.|+||||++++|++.+++||.++||++++++++.+|+|||++|||+
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa~ 320 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGS 320 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeEEe
Q 009425 337 IVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVY 416 (535)
Q Consensus 337 ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvp 416 (535)
++++++++++++||+|+.|++.++|+ ++|++|++|+++..|||+|||+|+.+++|+||+++|||+++|++++++++||
T Consensus 321 ii~~l~~~~~~~LG~a~~v~~~~ig~--~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVp 398 (515)
T 3iyg_H 321 IQTSVNALSSDVLGRCQVFEETQIGG--ERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVA 398 (515)
T ss_pred EeeccccCCHHHCCcccEEEEEEEcC--eEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeec
Confidence 99999999999999999999999986 8999999999999999999999999999999999999999999999988999
Q ss_pred CCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCCcccc
Q 009425 417 GGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTND 496 (535)
Q Consensus 417 GGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~~i~d 496 (535)
|||++|++++.+|++++++.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. .++.++|||+.+|++.|
T Consensus 399 GGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~-~~~~~~G~d~~~g~~~d 477 (515)
T 3iyg_H 399 GGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHA-QGGMWYGVDINTEDIAD 477 (515)
T ss_pred CCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhh-ccCCCeeEeCCCCcccc
Confidence 99999999999999999899999999999999999999999999999999999999999997 45678999999999999
Q ss_pred cccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 497 MREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 497 ~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
|++.|||||+.||+++|++|+|+|++|||||++|.+.
T Consensus 478 m~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 478 NFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred cHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999864
No 9
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.2e-113 Score=921.03 Aligned_cols=518 Identities=40% Similarity=0.622 Sum_probs=484.9
Q ss_pred CCceEEeecchhhhhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHH
Q 009425 9 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMV 88 (535)
Q Consensus 9 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~ 88 (535)
++|..+++++. +..+|.+++.+|+.||.+|+++|||||||+||+|||+++.|+++|||||+||||+|+++||+|+|++
T Consensus 4 ~~~~~~l~~~~--~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~ 81 (543)
T 1a6d_B 4 GQPIFILKEGT--KRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMV 81 (543)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHH
T ss_pred CcchhhcCCcc--hhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHH
Confidence 45766666654 5788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhcCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHH
Q 009425 89 ELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTT 168 (535)
Q Consensus 89 ~~~~~~~~~~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~ts 168 (535)
++|++||+++||||||+++||++||+++.+++++|+||+.|++||++|++.++++|++++++++. .+.+.|.++|+|+
T Consensus 82 e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~--~~~~~l~~va~ts 159 (543)
T 1a6d_B 82 EVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGA--DEKALLLKMAQTS 159 (543)
T ss_dssp HHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCT--THHHHHHHHHHHH
T ss_pred HHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCC--CCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988753 2578999999999
Q ss_pred hccccchhhhhHHHHHHHHHHHHhhhhh-c-CCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEE
Q 009425 169 LNSKMVNRCKRRLAEIAVKAVLAVADLE-R-KDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAI 246 (535)
Q Consensus 169 l~sk~~~~~~~~la~l~~~a~~~~~~~~-~-~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~l 246 (535)
++||+.++++++|++++++|+..+++.. + ..+|.++|+|++++|++++||++++|++|++++.|++||++++||||++
T Consensus 160 l~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll 239 (543)
T 1a6d_B 160 LNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIAL 239 (543)
T ss_dssp HTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEE
T ss_pred hccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEEE
Confidence 9999999999999999999999998542 2 3578889999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHH
Q 009425 247 LTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVEL 326 (535)
Q Consensus 247 l~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L 326 (535)
++++|++++++.++++.++++++++.+.++|+++++++++++.+.|+||||++++|++.|++||.++||++++++++++|
T Consensus 240 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~l 319 (543)
T 1a6d_B 240 LDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDM 319 (543)
T ss_dssp ESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHH
T ss_pred EecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHH
Q 009425 327 ELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVAR 406 (535)
Q Consensus 327 ~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~ 406 (535)
+|||++|||+++++++++++++||+|+.|++.++|. ++|++|++|++++.|||+|||+|+.+++|+||+++|||+++|
T Consensus 320 e~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~--~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r 397 (543)
T 1a6d_B 320 DKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGE--DYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVA 397 (543)
T ss_dssp HHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETT--EEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCceecccccCCHHHCCCceEEEEEEecC--ceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999986 899999999999999999999999999999999999999999
Q ss_pred HHhhCCeEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEe
Q 009425 407 NLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCG 486 (535)
Q Consensus 407 ~~l~~g~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~G 486 (535)
+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. .++.++|
T Consensus 398 ~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~-~~~~~~G 476 (543)
T 1a6d_B 398 SALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHA-KGNKTYG 476 (543)
T ss_dssp HHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHH-TTCTTEE
T ss_pred HHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHh-CCCCCee
Confidence 999999999999999999999999999888999999999999999999999999999999999999999997 4567899
Q ss_pred eecCCCcccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 487 IDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 487 id~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
||..+|++.||.+.|||||+.||+++|+.|+|+|++|||||++|...
T Consensus 477 ~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~ 523 (543)
T 1a6d_B 477 INVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATK 523 (543)
T ss_dssp EETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC--
T ss_pred EeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999764
No 10
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=2e-112 Score=905.72 Aligned_cols=504 Identities=33% Similarity=0.507 Sum_probs=486.2
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCC--CCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcC
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPD--GDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIG 99 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~--g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~G 99 (535)
++.+|.++|.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+||||+|+++||+|+|++++|++||+++|
T Consensus 4 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e~G 83 (513)
T 3iyg_B 4 DEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVG 83 (513)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhhhC
Confidence 5678999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCC-CChhHHHHHHHHHhccccchhhh
Q 009425 100 DGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGL-NDLEPLVQTCMTTLNSKMVNRCK 178 (535)
Q Consensus 100 DGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~-~~~~~l~~ia~tsl~sk~~~~~~ 178 (535)
|||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++.+. .+++.|.++|+|+++||+.++++
T Consensus 84 DGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~ 163 (513)
T 3iyg_B 84 DGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHK 163 (513)
T ss_pred CChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccccccch
Confidence 99999999999999999999999999999999999999999999999998876322 36789999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEEEecCCCCCCCC-
Q 009425 179 RRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPK- 257 (535)
Q Consensus 179 ~~la~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~~~l~~~~~~- 257 (535)
++|++++++|+.++++ .+|++.|+|+++.||+..||++++|++|++++.++ ||++++||||++++++|++++++
T Consensus 164 ~~i~~livdAv~~V~~----~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~-m~~~~en~kIll~~~~Le~~k~e~ 238 (513)
T 3iyg_B 164 DHFTKLAVEAVLRLKG----SGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN-QPKRIENAKILIANTGMDTDKIKI 238 (513)
T ss_pred HHHHHHHHHHHHHhcc----cCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC-CceeecCceEEEEcCCcccccccc
Confidence 9999999999999974 36789999999999999999999999999999988 99999999999999999999999
Q ss_pred CcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCee
Q 009425 258 TKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRI 337 (535)
Q Consensus 258 ~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~i 337 (535)
+++++.+++++++..+.++|+++++++++++.+.|+||||++++|++.+++||.++||++++++++.+|+|||++|||++
T Consensus 239 ~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~i 318 (513)
T 3iyg_B 239 FGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEI 318 (513)
T ss_pred cCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeEEeC
Q 009425 338 VPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYG 417 (535)
Q Consensus 338 i~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpG 417 (535)
+++++++++++||+|+.|+++.+|+ ++|++|++|++++.|||+|||+|+.+++|+||+++|||+++|++++++++|||
T Consensus 319 i~~l~~l~~~~LG~a~~v~~~~ig~--~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpG 396 (513)
T 3iyg_B 319 ASTFDHPELVKLGSCKLIEEVMIGE--DKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYG 396 (513)
T ss_pred ecccccCCHhHCCcccEEEEEEECC--eEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeC
Confidence 9999999999999999999999986 89999999999999999999999999999999999999999999999889999
Q ss_pred CChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCCccccc
Q 009425 418 GGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDM 497 (535)
Q Consensus 418 GG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~~i~d~ 497 (535)
||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. .++.++|||+.+|++.||
T Consensus 397 GGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~-~~~~~~G~d~~~g~~~d~ 475 (513)
T 3iyg_B 397 GGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHS-EGKTTAGLDMKEGTIGDM 475 (513)
T ss_pred CcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh-cCCCceeecCCCCCccch
Confidence 9999999999999999888999999999999999999999999999999999999999997 566789999999999999
Q ss_pred ccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 498 REQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 498 ~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
++.|||||+.||+++|++|+++|++|||||++|.+.
T Consensus 476 ~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~ 511 (513)
T 3iyg_B 476 SVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAA 511 (513)
T ss_pred HhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999865
No 11
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.2e-112 Score=906.44 Aligned_cols=507 Identities=38% Similarity=0.625 Sum_probs=486.3
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcCCC
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDG 101 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDG 101 (535)
+..+|.+++.+|+.||..|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 5 ~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GDG 84 (518)
T 3iyg_D 5 DRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDG 84 (518)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCCC
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhccccchhhhhHH
Q 009425 102 TTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRL 181 (535)
Q Consensus 102 ttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~~~~l 181 (535)
|||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++. .+.+.|.++|+||++||+.++|.++|
T Consensus 85 TTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~--~~~~~l~~vA~tsl~sK~~~~~~~~i 162 (518)
T 3iyg_D 85 TTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVEL--SDRETLLNSAATSLNSKVVSQYSSLL 162 (518)
T ss_pred ceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCC--CChHHHHHHhHhhhccccchhhHHHH
Confidence 9999999999999999999999999999999999999999999999988753 36789999999999999999999999
Q ss_pred HHHHHHHHHHhhhh-hcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEEEecCCCCCCCCCcc
Q 009425 182 AEIAVKAVLAVADL-ERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKH 260 (535)
Q Consensus 182 a~l~~~a~~~~~~~-~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~~~l~~~~~~~~~ 260 (535)
++++++|+.+++++ ....+|+++|+|++..|++..||++++|++|++++.| .||+.++||||++++|+|++++++++.
T Consensus 163 ~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~-~mp~~i~n~kIlll~~~Le~~k~~~~~ 241 (518)
T 3iyg_D 163 SPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVAN-SGITRVEKAKIGLIQFCLSAPKTDMDN 241 (518)
T ss_pred HHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEeccccc-CCCccccCceEEEEEeeccccccccCc
Confidence 99999999999753 2335788899999999999999999999999999999 899999999999999999999999999
Q ss_pred eEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEe-----cCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 261 KVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVIC-----QWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 261 ~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~-----~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
++.++++++++.+.++|+++++++++++.+.|+||||+ +++|++.+++||.++||++++++++.+|+|||++|||
T Consensus 242 ~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~tGa 321 (518)
T 3iyg_D 242 QIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGT 321 (518)
T ss_pred eEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred eeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCC-CceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeE
Q 009425 336 RIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSI 414 (535)
Q Consensus 336 ~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~-~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~v 414 (535)
+++++++++++++||+|+.|++.++|+. ++|++|++|++ ++.|||+|||+|+.+++|+||+++|||+++|+++++|++
T Consensus 322 ~ii~~l~~l~~~~LG~a~~v~~~~~g~~-~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~i 400 (518)
T 3iyg_D 322 KPVAHVDQFTADMLGSAELAEEVSLNGS-GKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRAL 400 (518)
T ss_pred EEecccccCCHHHCCcCcEEEEEEeCCC-ceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 9999999999999999999999999852 58999999988 899999999999999999999999999999999999999
Q ss_pred EeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCCcc
Q 009425 415 VYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGT 494 (535)
Q Consensus 415 vpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~~i 494 (535)
|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. .++.++|||+.+|++
T Consensus 401 VpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~-~~~~~~G~d~~~g~~ 479 (518)
T 3iyg_D 401 IAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHA-QGEKTTGINVRKGGI 479 (518)
T ss_pred eecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh-ccCCceeEeCCCCcc
Confidence 9999999999999999999889999999999999999999999999999999999999999997 456789999999999
Q ss_pred cccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 495 NDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 495 ~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
.||++.|||||+.||+++|+.|+|+|++|||||++|++.
T Consensus 480 ~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 480 SNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred cchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 999999999999999999999999999999999999763
No 12
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=4.4e-113 Score=916.07 Aligned_cols=514 Identities=41% Similarity=0.655 Sum_probs=486.7
Q ss_pred ceEEeecchhhhhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHHHH
Q 009425 11 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVEL 90 (535)
Q Consensus 11 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~ 90 (535)
|..+++++. ++.+|.+++.+|+.||..|+++|||||||+||+|||+++.|+++|||||+||||+|+++||+|+|++++
T Consensus 7 ~~~~l~~~~--~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~ 84 (545)
T 1a6d_A 7 PILVLKEGT--QREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEV 84 (545)
T ss_dssp ------------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGG
T ss_pred cccccCCcc--hhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHH
Confidence 655666654 578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhcCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhc
Q 009425 91 SRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLN 170 (535)
Q Consensus 91 ~~~~~~~~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~ 170 (535)
|++||+++||||||+++||++||+++.+++++|+||+.|++||++|++.++++|++++++ + .+.+.|.++|+|+++
T Consensus 85 a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~---~~~~~l~~va~tsl~ 160 (545)
T 1a6d_A 85 SKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-S---TDDATLRKIALTALS 160 (545)
T ss_dssp GGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-C---CCHHHHHHHHHHHTT
T ss_pred HHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-C---CCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999987 4 478899999999999
Q ss_pred cccchhhhhHHHHHHHHHHHHhhhhh--cCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEEEe
Q 009425 171 SKMVNRCKRRLAEIAVKAVLAVADLE--RKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILT 248 (535)
Q Consensus 171 sk~~~~~~~~la~l~~~a~~~~~~~~--~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~ 248 (535)
||+.++++++|++++++|+.++++.. ...+|.+.|+|++++|++++||++++|++|++++.|++||++++||||++++
T Consensus 161 sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~ 240 (545)
T 1a6d_A 161 GKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALID 240 (545)
T ss_dssp TSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEEC
T ss_pred cccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEEEe
Confidence 99999999999999999999998542 2357888999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHH
Q 009425 249 CPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELEL 328 (535)
Q Consensus 249 ~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ 328 (535)
++|++++++.++++.++++++++.+.++|+++++++++++.+.|+||||++++|++.|++||.++||++++++++++|+|
T Consensus 241 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ 320 (545)
T 1a6d_A 241 SALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEK 320 (545)
T ss_dssp SCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHH
T ss_pred cCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Q 009425 329 IAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNL 408 (535)
Q Consensus 329 ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~ 408 (535)
||++|||+++++++++++++||+|+.|++.++|. ++|++|++|++++.|||+|||+|+.+++|+||+++|||+++|++
T Consensus 321 ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~--~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a 398 (545)
T 1a6d_A 321 LAKATGAKIVTDLDDLTPSVLGEAETVEERKIGD--DRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAIT 398 (545)
T ss_dssp HHHHHCCCEESSGGGCCGGGCEEEEEEEEEEETT--EEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCeeecccccCCHHHCCCceEEEEEEecC--ceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999986 89999999999999999999999999999999999999999999
Q ss_pred hhCCeEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeee
Q 009425 409 IRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGID 488 (535)
Q Consensus 409 l~~g~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid 488 (535)
+++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. .++.++|||
T Consensus 399 ~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~-~~~~~~G~d 477 (545)
T 1a6d_A 399 KEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDE-KGRISVGVD 477 (545)
T ss_dssp HHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHH-TTCTTEEEE
T ss_pred HhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhh-cCCCCccee
Confidence 9999999999999999999999999888999999999999999999999999999999999999999997 456789999
Q ss_pred cCCCcccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 489 CNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 489 ~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
..+|++.||.+.|||||+.||+++|++|+|+|++|||||++|...
T Consensus 478 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~ 522 (545)
T 1a6d_A 478 LDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASK 522 (545)
T ss_dssp TTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC---
T ss_pred cccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999764
No 13
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.6e-112 Score=904.61 Aligned_cols=504 Identities=32% Similarity=0.487 Sum_probs=485.3
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcCCC
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDG 101 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDG 101 (535)
+..+|.+++.+|+.||++|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 4 ~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GDG 83 (517)
T 3iyg_Z 4 EVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDG 83 (517)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhccccchhhhhHH
Q 009425 102 TTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRL 181 (535)
Q Consensus 102 ttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~~~~l 181 (535)
|||+++||++||+++.+++++|+||+.|++||++|++.++++|++++++++. +.+.|.++|+||++||+.+.+.++|
T Consensus 84 TTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~---~~~~L~~va~tsl~sKi~~~~~d~l 160 (517)
T 3iyg_Z 84 TTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEM---DRETLIDVARTSLRTKVHAELADVL 160 (517)
T ss_pred ceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCC---CHHHHHHHHHHHhccccchhHHHHH
Confidence 9999999999999999999999999999999999999999999999988763 6789999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEEEecCCCCCCCCCcce
Q 009425 182 AEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHK 261 (535)
Q Consensus 182 a~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~~~l~~~~~~~~~~ 261 (535)
++++++|+..+.+. ...+|+++|+|++++||+..||++++|++|++++.||+||++++||+|++++++|++++++++++
T Consensus 161 a~l~vdaV~~V~~~-~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~~~~ 239 (517)
T 3iyg_Z 161 TEAVVDSILAIKKQ-DEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSG 239 (517)
T ss_pred HHHHHHHhheeccC-CCcCChhHheeeeecCCCccccceEeeEEEeccCCCCCccccccCCeEEEeccccccccccccee
Confidence 99999999998753 24578899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCc---------EEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHH
Q 009425 262 VDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGAT---------LVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIA 332 (535)
Q Consensus 262 v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~---------lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~ 332 (535)
+.++++++++.+.++|+++++..+++|...+++ |||++++|++.+++||.++||++++++++++|+|||++
T Consensus 240 ~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leria~~ 319 (517)
T 3iyg_Z 240 FFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERLTLA 319 (517)
T ss_pred EEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHHHHH
Confidence 999999999999999999999999999988877 48889999999999999999999999999999999999
Q ss_pred hCCeeccCCCCCCCCC-ceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhC
Q 009425 333 TGGRIVPRFQELTPEK-LGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRN 411 (535)
Q Consensus 333 tGa~ii~~~~~l~~~~-lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~ 411 (535)
|||++++++++++++. ||+|+ |++.++|. ++|+||++|++++.|||+|||+|+.+++|+||+++|||+++|+++++
T Consensus 320 tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~--~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~ 396 (517)
T 3iyg_Z 320 CGGIALNSLDDLNPDCLLGHAG-VYEYTLGE--EKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDD 396 (517)
T ss_pred hCCEEecchhhCcccccCCcce-EEEEEEcC--ceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999 99999 99999986 89999999999999999999999999999999999999999999999
Q ss_pred CeEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCC
Q 009425 412 NSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCND 491 (535)
Q Consensus 412 g~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~ 491 (535)
|++|||||++|++++.+|++++.+.++++|+++++|++||+.+|++|++|||+|+.+++.+|++.|. .++.++|||+.+
T Consensus 397 ~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~-~~~~~~G~d~~~ 475 (517)
T 3iyg_Z 397 GCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHS-ESGQLVGVDLNT 475 (517)
T ss_pred ceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-cCCCcEEEeCCC
Confidence 9999999999999999999999888999999999999999999999999999999999999999997 566789999999
Q ss_pred CcccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 492 VGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 492 ~~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
|++.||++.|||||+.||+++|++|+|+|++|||||++|.++
T Consensus 476 g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 517 (517)
T 3iyg_Z 476 GEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRAG 517 (517)
T ss_pred CcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 999999999999999999999999999999999999999874
No 14
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.9e-112 Score=912.59 Aligned_cols=507 Identities=31% Similarity=0.463 Sum_probs=486.2
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcCCC
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDG 101 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDG 101 (535)
++.+|.++|.+|+.||..|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++|||
T Consensus 18 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDG 97 (559)
T 3p9d_A 18 EKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDG 97 (559)
T ss_dssp EEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHHHHTSSC
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHh-hhccccCCCCChhHHHHHHHHHhccccchhhhhH
Q 009425 102 TTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLER-IAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRR 180 (535)
Q Consensus 102 ttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~-~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~~~~ 180 (535)
|||++|||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++. .+.+.|.++|+||++||++++++++
T Consensus 98 TTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~--~~~e~L~~vA~tsl~sK~~~~~~~~ 175 (559)
T 3p9d_A 98 TTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDT--LGKETLINIAKTSMSSKIIGADSDF 175 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC----CTTHHHHHHHTTSSSGGGTTHHH
T ss_pred cchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCC--CCHHHHHHHHHHHhccCcccchhHH
Confidence 999999999999999999999999999999999999999999999 9988863 2577899999999999999999999
Q ss_pred HHHHHHHHHHHhhh--hh-cCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccc--cceEEEEecCCCCCC
Q 009425 181 LAEIAVKAVLAVAD--LE-RKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIE--NAKIAILTCPFEPPK 255 (535)
Q Consensus 181 la~l~~~a~~~~~~--~~-~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~--~~kI~ll~~~l~~~~ 255 (535)
|++++++|+.++++ .. ...++++.|+|++++|++++||++++|++|++++.+++||+.++ ||||++++++|++++
T Consensus 176 i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~~~~Le~~k 255 (559)
T 3p9d_A 176 FSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKAR 255 (559)
T ss_dssp HHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEEEETTCCSCCC
T ss_pred HHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceeeccCCceEEEEeccccccc
Confidence 99999999999973 11 23578888999999999999999999999999999999999999 999999999999999
Q ss_pred CCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 256 PKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 256 ~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
+++++++.++++++++.+.++|+++++++++++.+.|+||||++++|++.|++||.++||++++++++.+|+|||++|||
T Consensus 256 ~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~TGa 335 (559)
T 3p9d_A 256 MAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRIARATGA 335 (559)
T ss_dssp CCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHHHHHHHSSC
T ss_pred cccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCC------CCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHh
Q 009425 336 RIVPRF------QELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLI 409 (535)
Q Consensus 336 ~ii~~~------~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l 409 (535)
++++++ +++++++||+|+.|++++++. ++|++|++|+++++|||+|||+|+.+++|+||+++|||+++|+++
T Consensus 336 ~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~--~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av 413 (559)
T 3p9d_A 336 TLVSSMSNLEGEETFESSYLGLCDEVVQAKFSD--DECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSVVKRTL 413 (559)
T ss_dssp CCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSS--CEEECEEEESSSCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccccccccCCHhHCccceEEEEEEEcC--ceEEEEEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999998 789999999999999999986 899999999999999999999999999999999999999999999
Q ss_pred hCCeEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCC------
Q 009425 410 RNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNP------ 483 (535)
Q Consensus 410 ~~g~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~------ 483 (535)
++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.+ ++.
T Consensus 414 ~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~-~~~~~~~~~ 492 (559)
T 3p9d_A 414 ESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAA-SQMAKPEDV 492 (559)
T ss_dssp TSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHT-TSCCC----
T ss_pred hcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhc-ccccccccc
Confidence 9999999999999999999999998899999999999999999999999999999999999999999973 333
Q ss_pred ------cEeeecCCCcccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 484 ------NCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 484 ------~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...
T Consensus 493 ~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~ 548 (559)
T 3p9d_A 493 KRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVD 548 (559)
T ss_dssp CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECC
T ss_pred ccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Confidence 79999999999999999999999999999999999999999999999653
No 15
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=6.7e-113 Score=914.50 Aligned_cols=520 Identities=30% Similarity=0.491 Sum_probs=486.0
Q ss_pred cccCCceEEeecchhhhhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHH
Q 009425 6 DEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAK 85 (535)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ 85 (535)
..|+.|..+++++. ++.+|.+++.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+||||+|+++||+|+
T Consensus 4 ~~~~~~~~~l~~~~--~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Ak 81 (550)
T 3p9d_G 4 GSQTPTIVVLKEGT--DASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAK 81 (550)
T ss_dssp ------------CC--CEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHH
T ss_pred ccCCcchhhhcCCc--chhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHH
Confidence 34566777777765 5778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCC-CChhHHHHH
Q 009425 86 LMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGL-NDLEPLVQT 164 (535)
Q Consensus 86 ll~~~~~~~~~~~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~-~~~~~l~~i 164 (535)
|++++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++.+. .+.+.|.++
T Consensus 82 ll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~v 161 (550)
T 3p9d_G 82 TLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERC 161 (550)
T ss_dssp HHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHH
T ss_pred HHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998876421 126789999
Q ss_pred HHHHhccccchhhhhHHHHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCC---CCCccccc
Q 009425 165 CMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHP---QMPKRIEN 241 (535)
Q Consensus 165 a~tsl~sk~~~~~~~~la~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~---~~~~~~~~ 241 (535)
|+||++||+++.++++|++++++|+.++++ +++|+++|.|+++.|++++||++++|++|++++.|| .||++++|
T Consensus 162 A~tsl~sK~~~~~~~~i~~livdAv~~V~~---~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en 238 (550)
T 3p9d_G 162 ARTAMSSKLIHNNADFFVKMCVDAVLSLDR---NDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNN 238 (550)
T ss_dssp HHHHHHHTTTGGGHHHHHHHHHHHHHHCCS---SSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSS
T ss_pred HHHhccCccccccHhHHHHHHHHHHHHhCc---cccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccC
Confidence 999999999999999999999999999973 357889999999999999999999999999999988 57889999
Q ss_pred ceEEEEecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeec
Q 009425 242 AKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 321 (535)
Q Consensus 242 ~kI~ll~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v 321 (535)
|||++++++|++++++.++++.+++++++..+.++|++++.+++++|.+.|++||+++++|++.+++||.++||++++++
T Consensus 239 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v 318 (550)
T 3p9d_G 239 PKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRV 318 (550)
T ss_dssp CCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECC
T ss_pred ceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHhCCeeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHH
Q 009425 322 GGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDA 401 (535)
Q Consensus 322 ~~~~L~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~da 401 (535)
++++|+|||++|||++++++++++++.+|+|+.|++.++|+ +++++|+||+++++|||+|||+|+.+++|+||+++||
T Consensus 319 ~k~~lerIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~--e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DA 396 (550)
T 3p9d_G 319 SADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGS--ERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDA 396 (550)
T ss_dssp CTTHHHHHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCSS--SCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCceecchhhCCHHHcCCceEEEEEEeCC--eEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhH
Confidence 99999999999999999999999999999999999999986 8999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCeEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcC
Q 009425 402 LCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIREN 481 (535)
Q Consensus 402 l~~~~~~l~~g~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~ 481 (535)
|+++|+++++|++|||||++|++++.+|+++++..++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. .+
T Consensus 397 l~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~-~~ 475 (550)
T 3p9d_G 397 IMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHS-KG 475 (550)
T ss_dssp HHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHH-HS
T ss_pred HHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh-cC
Confidence 99999999999999999999999999999999889999999999999999999999999999999999999999997 45
Q ss_pred CCcEeeecCCCcccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 482 NPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 482 ~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
+.++|||+.+|++.||++.|||||+.||+++|++|+++|++|||||++|...
T Consensus 476 ~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~ 527 (550)
T 3p9d_G 476 EKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNK 527 (550)
T ss_dssp CSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCC
T ss_pred CCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCC
Confidence 6789999999999999999999999999999999999999999999999864
No 16
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=2.6e-113 Score=914.57 Aligned_cols=507 Identities=35% Similarity=0.596 Sum_probs=488.2
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcCCC
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDG 101 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDG 101 (535)
++.+|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+++|++++|++||+++|||
T Consensus 13 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GDG 92 (528)
T 3p9d_D 13 NKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDG 92 (528)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHHHHHTCSC
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhccccchhhhhHH
Q 009425 102 TTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRL 181 (535)
Q Consensus 102 ttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~~~~l 181 (535)
|||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++. .+.+.|.++|+||++||++++++++|
T Consensus 93 TTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~--~~~e~l~~va~tsl~sK~~~~~~~~i 170 (528)
T 3p9d_D 93 TTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSL--SDREQLVRAASTSLSSKIVSQYSSFL 170 (528)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCS--CCHHHHHHHHHHHSCSSSCSTTHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCC--CCHHHHHHHHHHHhcCCccchhHHHH
Confidence 9999999999999999999999999999999999999999999999988763 36889999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCC-CCcccccceEEEEecCCCCCCCCCcc
Q 009425 182 AEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQ-MPKRIENAKIAILTCPFEPPKPKTKH 260 (535)
Q Consensus 182 a~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~-~~~~~~~~kI~ll~~~l~~~~~~~~~ 260 (535)
++++++|+.++++.....+++++|+|++++|++++||++++|++|++++.||+ ||+.++||||++++++|+++++++++
T Consensus 171 ~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~~le~~k~~~~~ 250 (528)
T 3p9d_D 171 APLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTEN 250 (528)
T ss_dssp HHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEECCCSSCCCCSSEE
T ss_pred HHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEEEeccccccccccCc
Confidence 99999999999864334678889999999999999999999999999999998 99999999999999999999999999
Q ss_pred eEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCC-----CHHHHHHHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 261 KVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 261 ~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i-----~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
++.++++++++.+.++|++++.++++++.+.|+||||++++| ++.+++||.++||++++++++.+|+|||++|||
T Consensus 251 ~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa 330 (528)
T 3p9d_D 251 NIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEIEFLSKGLGC 330 (528)
T ss_dssp EEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHHHHHHHHHHTC
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHHHHHHHHHHCC
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred eeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecC--C-CceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCC
Q 009425 336 RIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCA--N-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNN 412 (535)
Q Consensus 336 ~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~--~-~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g 412 (535)
+++++++++++++||+|+.|++.++|+ ++|++|++|+ + ++.|||+|||+|+.+++|.||+++|||+++|+++++|
T Consensus 331 ~ii~~~~~l~~~~LG~a~~v~~~~ig~--~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~ 408 (528)
T 3p9d_D 331 KPIADIELFTEDRLDSADLVEEIDSDG--SKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKER 408 (528)
T ss_dssp CCCSCSTTCCSSSEEEESCEECCEETT--EECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSS
T ss_pred EEecccccCCHHHCCcccEEEEEEECC--EEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999986 7999999998 6 8899999999999999999999999999999999999
Q ss_pred eEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCC
Q 009425 413 SIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDV 492 (535)
Q Consensus 413 ~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~ 492 (535)
++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. +++.++|||+.+|
T Consensus 409 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~-~~~~~~G~d~~~g 487 (528)
T 3p9d_D 409 GLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHE-NGELNDGISVRRS 487 (528)
T ss_dssp CEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCC-SSSCCCCCCSSSS
T ss_pred CccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-ccCCccceecCCC
Confidence 999999999999999999998888999999999999999999999999999999999999998876 4567899999999
Q ss_pred cccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 493 GTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 493 ~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
++.||++.|||||+.||+++|+.|+|+|++|||||++|.+.
T Consensus 488 ~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 488 GTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp SCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred CccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 99999999999999999999999999999999999999763
No 17
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=8.7e-112 Score=906.89 Aligned_cols=519 Identities=32% Similarity=0.559 Sum_probs=484.5
Q ss_pred cCCceEEeecchhhhhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHH
Q 009425 8 FGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLM 87 (535)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll 87 (535)
|+.|..+++++. ++.+|.+++.+|+.||..|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|+
T Consensus 1 ~~~~~~~~~~~~--~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll 78 (590)
T 3p9d_C 1 MQAPVVFMNASQ--ERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSM 78 (590)
T ss_dssp -----CCSCTTC--CBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTH
T ss_pred CCCCeEeecCCc--chhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHH
Confidence 456777777765 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcCCCchhHHHHHHHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHH
Q 009425 88 VELSRSQDYEIGDGTTGVVVMAGSLLEQAEKL-LERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCM 166 (535)
Q Consensus 88 ~~~~~~~~~~~GDGttt~vlLa~~ll~~~~~l-i~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~ 166 (535)
+++|++||+++||||||++|||++||+++.++ +++|+||+.|++||++|++.++++|++++++++. .+.+.|.++|+
T Consensus 79 ~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~--~~~e~L~~vA~ 156 (590)
T 3p9d_C 79 LELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDV--ENDAAMKKLIQ 156 (590)
T ss_dssp HHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTT--CCTHHHHHHHT
T ss_pred HHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhcccc--CCHHHHHHHHH
Confidence 99999999999999999999999999999999 9999999999999999999999999999988763 35789999999
Q ss_pred HHhccccchhhhhHHHHHHHHHHHHhhhhhc------C--CCCcc-ceeEEeccCCCcccceeEeEEEEeccCCCCCCCc
Q 009425 167 TTLNSKMVNRCKRRLAEIAVKAVLAVADLER------K--DVNLD-LIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPK 237 (535)
Q Consensus 167 tsl~sk~~~~~~~~la~l~~~a~~~~~~~~~------~--~~~~~-~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~ 237 (535)
|++++|+.++++++|++++++|+..+++... + .+|++ +|+|++++|+++.||++++|++|++++.++.||+
T Consensus 157 tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~ 236 (590)
T 3p9d_C 157 ASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSR 236 (590)
T ss_dssp TTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCS
T ss_pred HHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCcc
Confidence 9999999999999999999999999975321 1 23443 6999999999999999999999999999999999
Q ss_pred ccccceEEEEecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcE
Q 009425 238 RIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPA 317 (535)
Q Consensus 238 ~~~~~kI~ll~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~ 317 (535)
.++||||++++|+|+++++++++++.+++++++..+.+.|+++++++++++.+.|++|||++++|++.|++||.++||++
T Consensus 237 ~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~a 316 (590)
T 3p9d_C 237 HIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSV 316 (590)
T ss_dssp CEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCC
T ss_pred eeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhcccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecChhHHHHHHHHhCCeeccCCCCCCCCCcee-eeeEEEEEecCccceEEEEEecCCCce------------------
Q 009425 318 VRWVGGVELELIAIATGGRIVPRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHCANSRA------------------ 378 (535)
Q Consensus 318 i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~~g~~~~~~~~~~~~~~~~~------------------ 378 (535)
++++++.+|+|||++|||+++++++++++++||+ |+.|++..+|. +++++|++|+++..
T Consensus 317 v~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~--d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~ 394 (590)
T 3p9d_C 317 LRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGD--EYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRW 394 (590)
T ss_dssp CCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETT--EECEEECC------------------------
T ss_pred eccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcC--cEEEEEeCCCCccccccccccccccccchhhh
Confidence 9999999999999999999999999999999999 99999999986 89999999987666
Q ss_pred --------------------------------------EEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCCh
Q 009425 379 --------------------------------------VTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGA 420 (535)
Q Consensus 379 --------------------------------------~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~ 420 (535)
|||+|||+|+.+++|.||+++|||+++|+++++|++|||||+
T Consensus 395 ~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa 474 (590)
T 3p9d_C 395 KKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGA 474 (590)
T ss_dssp ---------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTH
T ss_pred hcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccH
Confidence 999999999999999999999999999999999889999999
Q ss_pred HhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCCcccccccC
Q 009425 421 AEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQ 500 (535)
Q Consensus 421 ~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~ 500 (535)
+|++++.+|+++++..++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. .++.++|||+.+|++.||++.
T Consensus 475 ~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~-~~~~~~G~d~~~g~~~dm~~~ 553 (590)
T 3p9d_C 475 TEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHA-QGNFTTGIDGDKGKIVDMVSY 553 (590)
T ss_dssp HHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHT-TSCTTCBCCTTSSSCBCTTTT
T ss_pred HHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-cCCCCEeEeCCCCeEeehHHc
Confidence 9999999999998888999999999999999999999999999999999999999997 467789999999999999999
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 501 NVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 501 gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
|||||+.||+++|++|+++|++|||||++|...
T Consensus 554 gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~ 586 (590)
T 3p9d_C 554 GIWEPEVIKQQSVKTAIESACLLLRVDDIVSGV 586 (590)
T ss_dssp TCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCC
T ss_pred CCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999764
No 18
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1e-111 Score=906.72 Aligned_cols=511 Identities=28% Similarity=0.450 Sum_probs=486.6
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcCCC
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDG 101 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDG 101 (535)
++.+|.+++.+|+.||++|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 11 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GDG 90 (546)
T 3p9d_F 11 ESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQDEITGDG 90 (546)
T ss_dssp EEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHHHHHHCSSC
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhccccchhhhhHH
Q 009425 102 TTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRL 181 (535)
Q Consensus 102 ttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~~~~l 181 (535)
|||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++.+..+.+.|.++|+||++||+.+.+.++|
T Consensus 91 TTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~l 170 (546)
T 3p9d_F 91 TTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVL 170 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSH
T ss_pred cccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHH
Confidence 99999999999999999999999999999999999999999999999887543347789999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEEEecCCCCCCCCCcce
Q 009425 182 AEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHK 261 (535)
Q Consensus 182 a~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~~~l~~~~~~~~~~ 261 (535)
++++++|+..+.+..+..+|+++|+|++++||+..||++++|++|++++.+|+||+.++||||++++|+|++++++++++
T Consensus 171 a~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~~Le~~k~e~~~~ 250 (546)
T 3p9d_F 171 TPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKTEVNSG 250 (546)
T ss_dssp HHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECCCSSSCCCSSCBC
T ss_pred HHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEecccccccCcceecCceEEEecCcccccccccCce
Confidence 99999999999765445688999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHHHHHHHHHHHcC----------CcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHH
Q 009425 262 VDIDTVEKFQTLRQQEQKYFDDMVQKCKDVG----------ATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAI 331 (535)
Q Consensus 262 v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~----------~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~ 331 (535)
+.++++++++.+.++|++++++.+++|...+ ++|||++++|++.|++||.++||++++++++.+|+|||+
T Consensus 251 ~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~vr~v~~~~leria~ 330 (546)
T 3p9d_F 251 FFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALRRAKRRNMERLQL 330 (546)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEECCCCHHHHHHHHH
T ss_pred EEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeEecCCHHHHHHHHH
Confidence 9999999999999999999999999998754 248999999999999999999999999999999999999
Q ss_pred HhCCeeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhC
Q 009425 332 ATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRN 411 (535)
Q Consensus 332 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~ 411 (535)
+|||+++++++++++++||+|+.|++.++|. ++|+||++|+++..|||+|||+|+.+++|+||+++|||+++|+++++
T Consensus 331 ~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~--~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 408 (546)
T 3p9d_F 331 VTGGEAQNSVEDLSPQILGFSGLVYQETIGE--EKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKD 408 (546)
T ss_dssp TTTBCCCCCCSSCSTTCCBCCCCBCBCCCSS--CCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HhCCEEecchhhCCHhHCCcccEEEEEEecC--ceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999998986 88999999999999999999999999999999999999999999999
Q ss_pred CeEEeCCChHhHHHHHHHHH---HhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHh----cCCCc
Q 009425 412 NSIVYGGGAAEIACSIAVDA---AADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIR----ENNPN 484 (535)
Q Consensus 412 g~vvpGGG~~e~~la~~L~~---~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~----~~~~~ 484 (535)
|++|||||++|++++.+|++ ++...++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. .++.+
T Consensus 409 ~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~ 488 (546)
T 3p9d_F 409 KNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRY 488 (546)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSC
T ss_pred CcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCce
Confidence 99999999999999999999 578889999999999999999999999999999999999999998873 14567
Q ss_pred EeeecCCCcccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCCC
Q 009425 485 CGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 534 (535)
Q Consensus 485 ~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~~ 534 (535)
+|||+.+|++.||++.|||||+.||+++|+.|+++|++|||||++|.+.+
T Consensus 489 ~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~ 538 (546)
T 3p9d_F 489 VGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGR 538 (546)
T ss_dssp CCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC
T ss_pred eeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999998754
No 19
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-109 Score=884.15 Aligned_cols=504 Identities=31% Similarity=0.469 Sum_probs=479.1
Q ss_pred hhhcc-HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcCC
Q 009425 22 SRLRG-LDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGD 100 (535)
Q Consensus 22 ~~~~g-~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~GD 100 (535)
++.+| .+++.+|+.||+.|+++|||||||+||+|||+++.|+|+|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 4 ~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GD 83 (512)
T 3iyg_Q 4 KHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGD 83 (512)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCC
Confidence 56788 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhccccchhhhhH
Q 009425 101 GTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRR 180 (535)
Q Consensus 101 Gttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~~~~ 180 (535)
||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++.....+..+.+.|.++|+||++||..+ ++++
T Consensus 84 GTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~-~~~~ 162 (512)
T 3iyg_Q 84 GTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYG-NEVF 162 (512)
T ss_pred ChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCcc-chHH
Confidence 999999999999999999999999999999999999999999999985422222247889999999999999876 5899
Q ss_pred HHHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEEEecCCCCCCCCCcc
Q 009425 181 LAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKH 260 (535)
Q Consensus 181 la~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~~~l~~~~~~~~~ 260 (535)
|++++++|+.++++. +..++.++|+|.+..|+++.||++++|++|++++.+ ||++++|+||++++|||++.+++.++
T Consensus 163 i~~livdAv~~V~~~-~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~ 239 (512)
T 3iyg_Q 163 LAKLIAQACVSIFPD-SGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKG 239 (512)
T ss_pred HHHHHHHHHHHHhcc-CCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC--CCcccccCceEEEecccccccccccc
Confidence 999999999999854 235788899999999999999999999999999875 99999999999999999999999999
Q ss_pred eEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCeeccC
Q 009425 261 KVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPR 340 (535)
Q Consensus 261 ~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~ 340 (535)
++.+++++++..+.++|+++++.+++++.+.|+|||+++++|++.++++|.++||++++++++.+|+|||++|||+++++
T Consensus 240 ~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~tGa~iis~ 319 (512)
T 3iyg_Q 240 TVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPR 319 (512)
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceeeeeEEEEEecCccceEEEEEecC-CCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCC
Q 009425 341 FQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCA-NSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGG 419 (535)
Q Consensus 341 ~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~-~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG 419 (535)
++++++++||+|+.|++.++|+ +++++|++|+ ++++|||+|||+|+.+++|+||+++|||+++|+++++|++|||||
T Consensus 320 l~~~~~~~LG~a~~v~~~~~g~--~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGG 397 (512)
T 3iyg_Q 320 LNPPVLEEMGHCDSVYLSEVGD--TQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGG 397 (512)
T ss_pred cccCCHHHCCcccEEEEEEeCC--eEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCc
Confidence 9999999999999999999986 8999999996 478999999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCC--ccccc
Q 009425 420 AAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDV--GTNDM 497 (535)
Q Consensus 420 ~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~--~i~d~ 497 (535)
++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. .++.++|||+.+| ++.||
T Consensus 398 a~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~-~~~~~~G~d~~~~~g~~~d~ 476 (512)
T 3iyg_Q 398 ATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQ-EGNKNVGLDIEAEVPAVKDM 476 (512)
T ss_pred HHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh-cCCCcEEEecCCCCCcccch
Confidence 99999999999999889999999999999999999999999999999999999999997 5677899999965 99999
Q ss_pred ccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 009425 498 REQNVFETLIGKQQQILLATQVVKMILKIDDVISP 532 (535)
Q Consensus 498 ~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~ 532 (535)
++.|||||+.||+++|++|+++|++|||||++|.+
T Consensus 477 ~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 477 LEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMA 511 (512)
T ss_pred HhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheec
Confidence 99999999999999999999999999999999975
No 20
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.6e-112 Score=914.85 Aligned_cols=525 Identities=27% Similarity=0.438 Sum_probs=480.6
Q ss_pred CcccccccCCceEEeecchhhhhhcc-HHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhccccc
Q 009425 1 MALAFDEFGRPFILLRQQEEKSRLRG-LDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV 79 (535)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~ 79 (535)
|++|.|++ .+..+++++. ++.+| .+++.+|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|++
T Consensus 1 ~~~~~~~~-~~~~~l~~~~--~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v 77 (568)
T 3p9d_H 1 MSLRLPQN-PNAGLFKQGY--NSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDI 77 (568)
T ss_dssp ----CCCC-CCCSSCCSSC--CBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCC
T ss_pred CCCCCCCc-chhhhhhcCc--cccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHccc
Confidence 78888765 2344456665 46677 57999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHhhhhhcCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChh
Q 009425 80 DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLE 159 (535)
Q Consensus 80 ~hP~~~ll~~~~~~~~~~~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~ 159 (535)
+||+|+|++++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++.++..+..+++
T Consensus 78 ~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~ 157 (568)
T 3p9d_H 78 VHPAVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKN 157 (568)
T ss_dssp CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTH
T ss_pred CCHHHHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987644445788
Q ss_pred HHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhhh-----hcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCC
Q 009425 160 PLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADL-----ERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQ 234 (535)
Q Consensus 160 ~l~~ia~tsl~sk~~~~~~~~la~l~~~a~~~~~~~-----~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~ 234 (535)
.|.++|+|+++||+.+++ ++|++++++|+.++++. ....+|++.|+|++++|++++||++++|++|++++. .
T Consensus 158 ~l~~va~tsl~sK~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~--~ 234 (568)
T 3p9d_H 158 ELLKMIKPVISSKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPE--G 234 (568)
T ss_dssp HHHHHHHHHHTTTSTTCH-HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBS--S
T ss_pred HHHHHHHHHhhccCcchH-HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeeccc--C
Confidence 999999999999999988 99999999999999763 233578889999999999999999999999999985 7
Q ss_pred CCcccc---cceEEEEecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHH
Q 009425 235 MPKRIE---NAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLM 311 (535)
Q Consensus 235 ~~~~~~---~~kI~ll~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~ 311 (535)
||++++ ||||++++|+|+++++++++++.+++++++..+.++|++++++++++|.+.|+||||++++|++.+++||.
T Consensus 235 m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~ 314 (568)
T 3p9d_H 235 HVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLN 314 (568)
T ss_dssp GGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHH
T ss_pred CcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHH
Confidence 899999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcEEeecChhHHHHHHHHhCCeeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecC--CCceEEEEEecCCHH
Q 009425 312 HRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCA--NSRAVTIFIRGGNKM 389 (535)
Q Consensus 312 ~~~I~~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~--~~~~~TI~l~G~t~~ 389 (535)
++||++++++++.+|+|||++|||++++++++++++.||+|+.|++.++|+ ++|++|++|+ +++.|||+|||+|+.
T Consensus 315 ~~gI~av~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~--~~~~~~~g~~~l~~~~~TIllrG~t~~ 392 (568)
T 3p9d_H 315 RYGILVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGG--DRVTVFKQEQGEISRTSTIILRGATQN 392 (568)
T ss_dssp HHTCEEECCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETT--EECBCCCCCSSSCCSSCEEEEEESCHH
T ss_pred HCCeEEEecCCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecC--ceEEEEecCCCCCCCeEEEEECCCcHH
Confidence 999999999999999999999999999999999999999999999999986 8999999998 689999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh--CCeEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHH
Q 009425 390 MIEETKRSIHDALCVARNLIR--NNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPI 467 (535)
Q Consensus 390 ~l~e~~~~l~dal~~~~~~l~--~g~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~ 467 (535)
+++|+||+++|||+++|++++ ++++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.
T Consensus 393 ~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~ 472 (568)
T 3p9d_H 393 NLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVN 472 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 999999999999999999999 888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-------cCCCcEeeecCCCc---ccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 468 ETLSAVKNQQIR-------ENNPNCGIDCNDVG---TNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 468 ~~l~~l~~~~~~-------~~~~~~Gid~~~~~---i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
+++.+|++.|.. +++.++|||+.+|+ +.||.+.|||||+.||+++|+.|+|+|++|||||++|.+.
T Consensus 473 ~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 548 (568)
T 3p9d_H 473 EVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAK 548 (568)
T ss_dssp HHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC----------
T ss_pred HHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Confidence 999999998863 14568999999997 9999999999999999999999999999999999999765
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=2e-110 Score=894.01 Aligned_cols=504 Identities=33% Similarity=0.516 Sum_probs=480.3
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-CCCCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcCC
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQS-PDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGD 100 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~-~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~GD 100 (535)
+..+|.++|.+|+.||..|+++|||||||+||+|||++ +.|+++|||||+||||+|+++||+|+|++++|++||+++||
T Consensus 11 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~~qd~~~GD 90 (527)
T 3p9d_B 11 TEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGD 90 (527)
T ss_dssp EEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHHHHHHHTCS
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHHHhHhhhCC
Confidence 56789999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHc-CCChhhHHHHHHHHHHHHHHHHHhhhccccCCC-CChhHHHHHHHHHhccccchhhh
Q 009425 101 GTTGVVVMAGSLLEQAEKLLER-GIHPIRIAEGYEMASRIAVEHLERIAQKFEFGL-NDLEPLVQTCMTTLNSKMVNRCK 178 (535)
Q Consensus 101 Gttt~vlLa~~ll~~~~~li~~-gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~-~~~~~l~~ia~tsl~sk~~~~~~ 178 (535)
||||++|||++||+++.+++.+ |+||+.|++||++|++.++++|+++++++..+. .+.+.|.++|+||++||+.++++
T Consensus 91 GTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~ 170 (527)
T 3p9d_B 91 GTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDK 170 (527)
T ss_dssp CTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGH
T ss_pred cHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccCcccchH
Confidence 9999999999999999999999 999999999999999999999999998876210 01689999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCCCCcccccceEEEEecCCCCCCCC-
Q 009425 179 RRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPK- 257 (535)
Q Consensus 179 ~~la~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~~~l~~~~~~- 257 (535)
++|++++++|+.++++.. |++.|+|+++.|+++.||++++|++|++++.+++ |++++||||++++|+|++++++
T Consensus 171 ~~i~~li~dAv~~V~~~~----~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~-p~~~~n~kIlll~~~le~~k~~~ 245 (527)
T 3p9d_B 171 DHFAELATNAILRLKGST----NLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ-PKRIENAKILIANTTLDTDKVKI 245 (527)
T ss_dssp HHHHHHHHHHHHTTCTTC----CTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC-CSCCSSCEEEEECSCSSCCCCSS
T ss_pred HHHHHHHHHHHHHhcccC----CcceEEEEEcCCCCccccEEEEeEEEecccCCCC-CeeeecceEEEeccccccccccc
Confidence 999999999999997532 5678999999999999999999999999999987 8899999999999999999999
Q ss_pred CcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCee
Q 009425 258 TKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRI 337 (535)
Q Consensus 258 ~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~i 337 (535)
++.++.+++++++..+.++|++++++.++++.+.|++||+++++|++.++++|.++||++++++++.+|+|+|++|||++
T Consensus 246 ~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~ia~~tGa~i 325 (527)
T 3p9d_B 246 FGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLALVTGGEV 325 (527)
T ss_dssp CCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHHHHHTCCCC
T ss_pred cCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCEE
Confidence 58888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeEEeC
Q 009425 338 VPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYG 417 (535)
Q Consensus 338 i~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpG 417 (535)
++++++++++.||+|+.|+++.+|. +++++|++|+++++|||+|||+|+.+++|+||+++|||+++|+++++|++|||
T Consensus 326 v~~~~~~~~~~LG~a~~v~~~~ig~--~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpG 403 (527)
T 3p9d_B 326 VSTFDEPSKCKLGECDVIEEIMLGE--QPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLG 403 (527)
T ss_dssp CSTTSCCTTSCEECSBCCBCCCSSS--CCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEET
T ss_pred ecchhhCCHHHCCCCcEEEEEEecc--eEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 9999999999999999999999986 89999999999999999999999999999999999999999999999999999
Q ss_pred CChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCCccccc
Q 009425 418 GGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDM 497 (535)
Q Consensus 418 GG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~~i~d~ 497 (535)
||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. .++.++|||+.+|++.||
T Consensus 404 GGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~-~~~~~~G~d~~~g~~~dm 482 (527)
T 3p9d_B 404 GGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIY-NGISTSGLDLNNGTIADM 482 (527)
T ss_dssp TTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHH-HTCSCCCCCSSSTTCCCH
T ss_pred CcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHh-cCCCceeEECCCCCCcch
Confidence 9999999999999998888999999999999999999999999999999999999999987 466789999999999999
Q ss_pred ccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 009425 498 REQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 533 (535)
Q Consensus 498 ~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~~ 533 (535)
++.|||||+.||+++|++|+++|++|||||++|...
T Consensus 483 ~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~ 518 (527)
T 3p9d_B 483 RQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRAR 518 (527)
T ss_dssp HHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC
T ss_pred HhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcC
Confidence 999999999999999999999999999999999754
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.2e-103 Score=835.79 Aligned_cols=473 Identities=38% Similarity=0.627 Sum_probs=384.1
Q ss_pred cccCCCCCeEEcCChHHHhcccccccHHHHHHHHHHHhhhhhcCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 009425 56 MLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEM 135 (535)
Q Consensus 56 ~i~~~~g~~~iTnDG~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~ 135 (535)
||+++.|+++|||||+||||+|+++||+|+|++++|++||+++||||||+++||++||+++.+++++|+||+.|++||++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhhhh--cCCCC-ccceeEEeccC
Q 009425 136 ASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLE--RKDVN-LDLIKVEGKVG 212 (535)
Q Consensus 136 a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~~~~la~l~~~a~~~~~~~~--~~~~~-~~~I~i~~~~G 212 (535)
|++.++++|++++++++. .+.+.|.++|+|+++||+.++++++|++++++|+.++++.. ...+| .++|+|++++|
T Consensus 81 A~~~a~~~L~~~s~~v~~--~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G 158 (500)
T 3aq1_B 81 AAEKCREILETITIAISP--DDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAG 158 (500)
T ss_dssp HHHHHHHHHHHHCEECCT--TCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEES
T ss_pred HHHHHHHHHHHhcCCCCC--CcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecC
Confidence 999999999999988753 36889999999999999999999999999999999997541 22466 67899999999
Q ss_pred CCcccceeEeEEEEeccCCCCCCCcccccceEEEEecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 009425 213 GRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVG 292 (535)
Q Consensus 213 ~~~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~ 292 (535)
++++||++++|++|++++.|++||++++||||++++++|++++++.++++.++++++++.+.++|+++++++++++.+.|
T Consensus 159 ~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g 238 (500)
T 3aq1_B 159 GSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASG 238 (500)
T ss_dssp SCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTC
T ss_pred CCccceEEEeeeEEeecCCCCCCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCeeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEe
Q 009425 293 ATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEH 372 (535)
Q Consensus 293 ~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~ 372 (535)
+||||++++|++.|++||.++||++++++++++|+|||++|||++++++++++++.||+|+.|++.++|. ++|++|++
T Consensus 239 ~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~--~~~~~~~g 316 (500)
T 3aq1_B 239 ANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRG--GKMTYVTG 316 (500)
T ss_dssp CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSS--SEEEEEEE
T ss_pred cCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecC--eEEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986 89999999
Q ss_pred cCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCChHhHHHHHHHHHHhccCCChHHHHHHHHHHHHh
Q 009425 373 CANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALD 452 (535)
Q Consensus 373 ~~~~~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~~e~~la~~L~~~~~~~~~~~~~~~~~~a~aL~ 452 (535)
|++++.|||+|||+|+.+++|+||+++|||+++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+
T Consensus 317 ~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe 396 (500)
T 3aq1_B 317 CQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALE 396 (500)
T ss_dssp ETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTT
T ss_pred CCCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCCcccccccCCcccchhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 009425 453 AIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISP 532 (535)
Q Consensus 453 ~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~~a~~lL~iD~iI~~ 532 (535)
.||++|++|||+|+.+++.+|++.|. .++.++|||..+|++.||.+.|||||+.||+++|++|+|+|++|||||++|..
T Consensus 397 ~ip~~La~NaG~d~~~~v~~l~~~h~-~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 475 (500)
T 3aq1_B 397 VIPVALAENAGLDPIDIMVELRSQHE-KGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVAS 475 (500)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHH-TTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhc-CCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999997 45678999999999999999999999999999999999999999999999976
Q ss_pred C
Q 009425 533 S 533 (535)
Q Consensus 533 ~ 533 (535)
.
T Consensus 476 ~ 476 (500)
T 3aq1_B 476 K 476 (500)
T ss_dssp -
T ss_pred C
Confidence 4
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.1e-95 Score=778.32 Aligned_cols=459 Identities=24% Similarity=0.342 Sum_probs=425.8
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccH----HHHHHHHHHHhhhhh
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQ----IAKLMVELSRSQDYE 97 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP----~~~ll~~~~~~~~~~ 97 (535)
+..+|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+||+|+|+++|| +|+|++++|++||++
T Consensus 4 ~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (543)
T 1we3_A 4 ILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDV 83 (543)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhhee
Confidence 4568999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhccccchhh
Q 009425 98 IGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRC 177 (535)
Q Consensus 98 ~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~ 177 (535)
+||||||+++||++||+++.+++++|+||+.|++||++|++.+++.|++++++++ +.+.|.++|++|++
T Consensus 84 ~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~----~~~~l~~vA~iS~~------- 152 (543)
T 1we3_A 84 AGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVE----DRKAIEEVATISAN------- 152 (543)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC----SHHHHHHHHHHHHT-------
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC----CHHHHHHhhhhhcC-------
Confidence 9999999999999999999999999999999999999999999999999998875 68899999999886
Q ss_pred hhHHHHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccc-eeEeEEEEeccCCCCCC-------CcccccceEEEEec
Q 009425 178 KRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDT-ELIYGITVDKDMSHPQM-------PKRIENAKIAILTC 249 (535)
Q Consensus 178 ~~~la~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds-~li~Giv~~~~~~~~~~-------~~~~~~~kI~ll~~ 249 (535)
+++|++++++|+.++++ .+.|+|+ .|+++++| ++++|++|+++|.+|+| ++.++||+|+++++
T Consensus 153 ~~~i~~li~dAv~~V~~-------~g~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~ 223 (543)
T 1we3_A 153 DPEVGKLIADAMEKVGK-------EGIITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEK 223 (543)
T ss_dssp CHHHHHHHHHHHHTTCT-------TSEEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESS
T ss_pred CHHHHHHHHHHHHHhCc-------CCcEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECC
Confidence 37899999999999863 2457776 79999998 99999999999999864 55689999999998
Q ss_pred CCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCC------CcEEe----
Q 009425 250 PFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRN------LPAVR---- 319 (535)
Q Consensus 250 ~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~------I~~i~---- 319 (535)
+ +++++++ .++++++.+.|+||||++++|+++|+++|..|+ +++++
T Consensus 224 ~-------------Is~~~~l-----------~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~ 279 (543)
T 1we3_A 224 K-------------VSNVREL-----------LPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGF 279 (543)
T ss_dssp C-------------BCCHHHH-----------HHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSS
T ss_pred C-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccch
Confidence 6 4556664 578999999999999999999999999999864 56666
Q ss_pred -ecChhHHHHHHHHhCCeeccC-----CCCCCCCCceeeeeEEEEEecCccceEEEEEecCCC-----------------
Q 009425 320 -WVGGVELELIAIATGGRIVPR-----FQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANS----------------- 376 (535)
Q Consensus 320 -~v~~~~L~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~----------------- 376 (535)
++++++|+|||++|||+++++ +++++++.||+|+.|++. ++++++|++|.++
T Consensus 280 ~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~-----~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~ 354 (543)
T 1we3_A 280 GDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRIT-----KDETTIVGGKGKKEDIEARINGIKKELETT 354 (543)
T ss_dssp HHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEEC-----SSCEEEEEECCCHHHHHHHHHHHHHHHTTC
T ss_pred hhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEE-----cCEEEEEcCCCCHHHHHHHHHHHHHHhhcc
Confidence 788999999999999999996 899999999999999873 3899999999853
Q ss_pred ------------------ceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCChHhHHHHHHHHHHhccCCC
Q 009425 377 ------------------RAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPG 438 (535)
Q Consensus 377 ------------------~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~~e~~la~~L~~~~~~~~~ 438 (535)
+.|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++++.+|++++.+.++
T Consensus 355 ~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g 433 (543)
T 1we3_A 355 DSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEG 433 (543)
T ss_dssp CSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCH
T ss_pred CchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCc
Confidence 789999999999999999999999999999999999 9999999999999999999887889
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCCcccccccCCcccchhHHHHHHHHHHH
Q 009425 439 VEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQ 518 (535)
Q Consensus 439 ~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~ 518 (535)
++|+++++|++||+.||++|++|||+|+.+++.+|++.| ++.++|||..+|++.||++.|||||+.||+++|++|++
T Consensus 434 ~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h---~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e 510 (543)
T 1we3_A 434 DEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAET---KNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAAS 510 (543)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCC---SCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhc---CCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999876 35789999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhcCC
Q 009425 519 VVKMILKIDDVISPS 533 (535)
Q Consensus 519 ~a~~lL~iD~iI~~~ 533 (535)
+|++|||+|++|...
T Consensus 511 ~a~~iL~id~iI~~~ 525 (543)
T 1we3_A 511 IGALILTTEAVVAEK 525 (543)
T ss_dssp HHHHHHTEEEEEEEC
T ss_pred HHHHHHHHHHHhhcC
Confidence 999999999999753
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=9.6e-96 Score=777.48 Aligned_cols=457 Identities=22% Similarity=0.336 Sum_probs=423.6
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccH----HHHHHHHHHHhhhhh
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQ----IAKLMVELSRSQDYE 97 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP----~~~ll~~~~~~~~~~ 97 (535)
+..+|.++|.+|+.||..|+++|++||||+||+|||+++.|+|+|||||+||+|+|+++|| +|+|++++|++|+++
T Consensus 4 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (547)
T 1kp8_A 4 DVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDA 83 (547)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccc
Confidence 4568999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhccccchhh
Q 009425 98 IGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRC 177 (535)
Q Consensus 98 ~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~ 177 (535)
+||||||++|||++||+++.+++++|+||+.|++||++|++.+++.|++++++++ +.+.|.++|++|+++
T Consensus 84 ~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~----~~e~l~~vA~iS~~~------ 153 (547)
T 1kp8_A 84 AGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCS----DSKAIAQVGTISANS------ 153 (547)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCC----SHHHHHHHHHHHTTS------
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCC----CHHHHHHHHHHhccc------
Confidence 9999999999999999999999999999999999999999999999999998875 688999999999875
Q ss_pred hhHHHHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccc-eeEeEEEEeccCCCCCC-------CcccccceEEEEec
Q 009425 178 KRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDT-ELIYGITVDKDMSHPQM-------PKRIENAKIAILTC 249 (535)
Q Consensus 178 ~~~la~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds-~li~Giv~~~~~~~~~~-------~~~~~~~kI~ll~~ 249 (535)
+++|++++++|+.++++ .+.|+|+ .|+++++| ++++|++|+++|.+|+| ++.++||+|+++++
T Consensus 154 ~~~i~~liadAv~~V~~-------dg~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~ 224 (547)
T 1kp8_A 154 DETVGKLIAEAMDKVGK-------EGVITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADK 224 (547)
T ss_dssp CHHHHHHHHHHHHHHCT-------TSEEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEES
T ss_pred hhHHHHHHHHHHHHhCc-------CCcEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcC
Confidence 58999999999999973 2457776 79999999 99999999999999875 44589999999998
Q ss_pred CCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCC------cEEe----
Q 009425 250 PFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNL------PAVR---- 319 (535)
Q Consensus 250 ~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I------~~i~---- 319 (535)
++ ++++++ .++++++.+.|+||||++++|+++|+++|..|+| ++++
T Consensus 225 ~I-------------s~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~ 280 (547)
T 1kp8_A 225 KI-------------SNIREM-----------LPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGF 280 (547)
T ss_dssp EE-------------CCGGGT-----------HHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSC
T ss_pred cC-------------CCHHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEecccc
Confidence 64 445554 4789999999999999999999999999999765 5565
Q ss_pred -ecChhHHHHHHHHhCCeeccC-----CCCCCCCCceeeeeEEEEEecCccceEEEEEecCCC-----------------
Q 009425 320 -WVGGVELELIAIATGGRIVPR-----FQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANS----------------- 376 (535)
Q Consensus 320 -~v~~~~L~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~----------------- 376 (535)
++++++|+|||++|||+++++ +++++++.||+|+.|++. ++++++|++|.++
T Consensus 281 ~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~-----~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~ 355 (547)
T 1kp8_A 281 GDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVIN-----KDTTTIIDGVGEEAAIQGRVAQIRQQIEEA 355 (547)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEEC-----SSCEEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred ccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEc-----cceEEEEcCCCCHHHHHHHHHHHHHHhhcc
Confidence 888999999999999999995 999999999999999873 3899999999864
Q ss_pred ------------------ceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCChHhHHHHHHHHHHhccCCC
Q 009425 377 ------------------RAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPG 438 (535)
Q Consensus 377 ------------------~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~~e~~la~~L~~~~~~~~~ 438 (535)
+.|||+|||+|+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++. .++
T Consensus 356 ~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g 433 (547)
T 1kp8_A 356 TSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QNA 433 (547)
T ss_dssp CSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SSH
T ss_pred cchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cCc
Confidence 689999999999999999999999999999999999 999999999999999998876 678
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCCcccccccCCcccchhHHHHHHHHHHH
Q 009425 439 VEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQ 518 (535)
Q Consensus 439 ~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~ 518 (535)
++|+++++|++||+.||++|++|||+|+.+++.+|++. +.++|||..+|++.||++.|||||+.||+++|++|++
T Consensus 434 ~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-----~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~ 508 (547)
T 1kp8_A 434 DQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-----DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAAS 508 (547)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-----CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-----CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999852 4679999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhcCC
Q 009425 519 VVKMILKIDDVISPS 533 (535)
Q Consensus 519 ~a~~lL~iD~iI~~~ 533 (535)
+|++||++|++|...
T Consensus 509 ~A~~iL~id~iI~~~ 523 (547)
T 1kp8_A 509 VAGLMITTECMVTDL 523 (547)
T ss_dssp HHHHHHTEEEEEEEC
T ss_pred HHHHHHhHhheeecC
Confidence 999999999999753
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.7e-96 Score=783.93 Aligned_cols=458 Identities=22% Similarity=0.333 Sum_probs=393.8
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccH----HHHHHHHHHHhhhhh
Q 009425 22 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQ----IAKLMVELSRSQDYE 97 (535)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP----~~~ll~~~~~~~~~~ 97 (535)
+..+|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+||+|+|+++|| +|+|++++|++||++
T Consensus 5 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 84 (545)
T 1iok_A 5 EVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDE 84 (545)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGG
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccc
Confidence 4568999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhccccchhh
Q 009425 98 IGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRC 177 (535)
Q Consensus 98 ~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~~ 177 (535)
+||||||++|||++||+++.+++.+|+||+.|++||++|++.+++.|++++++++ +.+.|.++|++|+++
T Consensus 85 ~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~----~~e~l~~va~iS~~~------ 154 (545)
T 1iok_A 85 AGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVN----DSSEVAQVGTISANG------ 154 (545)
T ss_dssp CSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCC----STTTTTHHHHHTTTT------
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC----CHHHHHHHHHhhcCC------
Confidence 9999999999999999999999999999999999999999999999999998875 567899999999875
Q ss_pred hhHHHHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccc-eeEeEEEEeccCCCCC-------CCcccccceEEEEec
Q 009425 178 KRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDT-ELIYGITVDKDMSHPQ-------MPKRIENAKIAILTC 249 (535)
Q Consensus 178 ~~~la~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds-~li~Giv~~~~~~~~~-------~~~~~~~~kI~ll~~ 249 (535)
+++|++++++|+.++++ .+.|+|+ .|+++++| ++++|++|++++.+|+ |++.++||+|+++++
T Consensus 155 ~~~i~~li~dAv~~V~~-------~g~I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~ 225 (545)
T 1iok_A 155 ESFIGQQIAEAMQRVGN-------EGVITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEK 225 (545)
T ss_dssp CHHHHHHHHHHHHHHCT-------TSCCCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSS
T ss_pred chhHHHHHHHHHHHhcc-------CCeEEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcC
Confidence 58999999999999973 2347776 79999999 9999999999999986 455689999999999
Q ss_pred CCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCC------cEEe----
Q 009425 250 PFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNL------PAVR---- 319 (535)
Q Consensus 250 ~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I------~~i~---- 319 (535)
+++. ++++ .++++++.+.|+||||++++|+++|+++|..|+| .+++
T Consensus 226 ~I~~-------------~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~ 281 (545)
T 1iok_A 226 KLSS-------------LQPM-----------VPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGF 281 (545)
T ss_dssp CBCC-------------CCC----------------------CCCCEEEESCBC-----------------CEEEECSCC
T ss_pred CcCC-------------HHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchh
Confidence 8653 2333 4678899999999999999999999999999765 5555
Q ss_pred -ecChhHHHHHHHHhCCeeccC-----CCCCCCCCceeeeeEEEEEecCccceEEEEEecCCC-----------------
Q 009425 320 -WVGGVELELIAIATGGRIVPR-----FQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANS----------------- 376 (535)
Q Consensus 320 -~v~~~~L~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~----------------- 376 (535)
++++++|+|||++|||+++++ ++++++++||+|+.|++. ++++++|++|+++
T Consensus 282 ~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~-----~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~ 356 (545)
T 1iok_A 282 GDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSIN-----KDNTTIVDGAGEKAEIEARVSQIRQQIEET 356 (545)
T ss_dssp TTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEEC-----SSCEEEESCCCCHHHHHHHHHHHHHHHTTC
T ss_pred hhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEe-----cCEEEEEeCCCCHHHHHHHHHHHHHHHhcc
Confidence 888999999999999999996 999999999999999873 3899999999854
Q ss_pred ------------------ceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCChHhHHHHHHHHHHhccCCC
Q 009425 377 ------------------RAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPG 438 (535)
Q Consensus 377 ------------------~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~~e~~la~~L~~~~~~~~~ 438 (535)
+.|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++++.+|++++. .++
T Consensus 357 ~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g 434 (545)
T 1iok_A 357 TSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANS 434 (545)
T ss_dssp CCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSH
T ss_pred CchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCc
Confidence 689999999999999999999999999999999999 999999999999999998876 778
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCCcccccccCCcccchhHHHHHHHHHHH
Q 009425 439 VEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQ 518 (535)
Q Consensus 439 ~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~ 518 (535)
++|+++++|++||+.||++|++|||+|+.+++.+|++.| +.++|||..+|++.||++.|||||+.||+++|++|++
T Consensus 435 ~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~----~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~ 510 (545)
T 1iok_A 435 DQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS----DKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAAS 510 (545)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC----STTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc----CCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998643 4679999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhcCC
Q 009425 519 VVKMILKIDDVISPS 533 (535)
Q Consensus 519 ~a~~lL~iD~iI~~~ 533 (535)
+|++||++|++|...
T Consensus 511 ~A~~iL~id~iI~~~ 525 (545)
T 1iok_A 511 VAGLLITTEAMIAEK 525 (545)
T ss_dssp HHHHHHTEEEEEEEC
T ss_pred HHHHHHhHHHhhccC
Confidence 999999999999753
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=8.2e-95 Score=768.00 Aligned_cols=457 Identities=24% Similarity=0.317 Sum_probs=349.8
Q ss_pred hhhhccHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCeEEcCChHHHhcccccccHH----HHHHHHHHHhhhh
Q 009425 21 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDY 96 (535)
Q Consensus 21 ~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~----~~ll~~~~~~~~~ 96 (535)
|+..+|.++|.+|+.|+..|+++|++||||+||+|||+++.|+|+|||||+||+|+|+++||+ |+|++++|++|++
T Consensus 3 k~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~ 82 (546)
T 3rtk_A 3 KTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDD 82 (546)
T ss_dssp ----------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC-
T ss_pred ceeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhh
Confidence 356789999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred hcCCCchhHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhhccccCCCCChhHHHHHHHHHhccccchh
Q 009425 97 EIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNR 176 (535)
Q Consensus 97 ~~GDGttt~vlLa~~ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~~~~i~~~~~~~~~l~~ia~tsl~sk~~~~ 176 (535)
++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +.+.|.++|++|+++
T Consensus 83 e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~----~~e~L~~vA~iS~~~----- 153 (546)
T 3rtk_A 83 VAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVE----TKEQIAATAAISAGD----- 153 (546)
T ss_dssp ------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC----SHHHHHHHHHHHHTC-----
T ss_pred hhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC----ChHHHHhHeEEeCCc-----
Confidence 99999999999999999999999999999999999999999999999999998876 688999999998873
Q ss_pred hhhHHHHHHHHHHHHhhhhhcCCCCccceeEEeccCCCcccceeEeEEEEeccCCCCC-------CCcccccceEEEEec
Q 009425 177 CKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQ-------MPKRIENAKIAILTC 249 (535)
Q Consensus 177 ~~~~la~l~~~a~~~~~~~~~~~~~~~~I~i~~~~G~~~~ds~li~Giv~~~~~~~~~-------~~~~~~~~kI~ll~~ 249 (535)
+.+++++++|+.++++ .+.|+|++.. +...||++++|++|++++.+|+ |++.++||+|+++++
T Consensus 154 --~~i~~liadAv~~V~~-------dgvI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~ 223 (546)
T 3rtk_A 154 --QSIGDLIAEAMDKVGN-------EGVITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSS 223 (546)
T ss_dssp --HHHHHHHHHHHHHSCT-------TSEEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSS
T ss_pred --hHHHHHHHHHHHHhcc-------CCceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECC
Confidence 6899999999999873 2458888644 4557899999999999999984 577889999999998
Q ss_pred CCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCC------CcEEe----
Q 009425 250 PFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRN------LPAVR---- 319 (535)
Q Consensus 250 ~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~------I~~i~---- 319 (535)
. +++++++ .++++++.+.|+||||++++|+++|+++|..|+ +.+++
T Consensus 224 k-------------Is~~~~l-----------~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~ 279 (546)
T 3rtk_A 224 K-------------VSTVKDL-----------LPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGF 279 (546)
T ss_dssp E-------------ECCSTTT-----------HHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSC
T ss_pred c-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccc
Confidence 5 4455554 477999999999999999999999999999765 34544
Q ss_pred -ecChhHHHHHHHHhCCeecc-----CCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCC-----------------
Q 009425 320 -WVGGVELELIAIATGGRIVP-----RFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANS----------------- 376 (535)
Q Consensus 320 -~v~~~~L~~ia~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~----------------- 376 (535)
+.++.+|+|||++|||++++ ++++++++.||+|+.|++ + ++++++|++|.++
T Consensus 280 ~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i---~--~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~ 354 (546)
T 3rtk_A 280 GDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVV---T--KDETTIVEGAGDTDAIAGRVAQIRQEIENS 354 (546)
T ss_dssp HHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEE---C--SSCEEEEEECSCHHHHHHHHHHHHHHHHTC
T ss_pred cccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEE---c--CCeEEEEcCCCCHHHHHHHHHHHHHHHhhc
Confidence 44589999999999999999 589999999999999984 3 3889999999864
Q ss_pred ------------------ceEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCChHhHHHHHHHHHHhccCCC
Q 009425 377 ------------------RAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPG 438 (535)
Q Consensus 377 ------------------~~~TI~l~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~~e~~la~~L~~~~~~~~~ 438 (535)
+.|||+|||+|+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++ .++
T Consensus 355 ~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g 431 (546)
T 3rtk_A 355 DSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEG 431 (546)
T ss_dssp SCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCT
T ss_pred cchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--ccc
Confidence 389999999999999999999999999999999999 99999999999999999876 789
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcEeeecCCCcccccccCCcccchhHHHHHHHHHHH
Q 009425 439 VEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQ 518 (535)
Q Consensus 439 ~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~~ 518 (535)
++|+++++|++||+.||++|++|||+|+.+++.+|++. ...+|||..+|++.||++.|||||+.||+++|++|++
T Consensus 432 ~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-----~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e 506 (546)
T 3rtk_A 432 DEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-----PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAAS 506 (546)
T ss_dssp THHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-----CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-----cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999863 2348999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhcCC
Q 009425 519 VVKMILKIDDVISPS 533 (535)
Q Consensus 519 ~a~~lL~iD~iI~~~ 533 (535)
+|++|||+|++|...
T Consensus 507 ~A~~iL~id~iI~~~ 521 (546)
T 3rtk_A 507 IAGLFLTTEAVVADK 521 (546)
T ss_dssp HHHHHHHCC------
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999754
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=2.7e-38 Score=289.15 Aligned_cols=173 Identities=32% Similarity=0.580 Sum_probs=150.9
Q ss_pred cccceeEeEEEEeccCCCCCCCcccccceEEEEecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 009425 215 LEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGAT 294 (535)
Q Consensus 215 ~~ds~li~Giv~~~~~~~~~~~~~~~~~kI~ll~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~ 294 (535)
++||++++|++|++++.++.||++++||||++++|+|+++++++++++.++++++++.+.++|++++++++++|++.|+|
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~n 80 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPD 80 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCeeccCCCCCCCCCcee-eeeEEEEEecCccceEEEEEec
Q 009425 295 LVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHC 373 (535)
Q Consensus 295 lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~~g~~~~~~~~~~~~ 373 (535)
||+++++|+|.|++||.++||++++++++++|+|||++|||++++++++++++.+|+ |+.|++.++|+ ++|++|+||
T Consensus 81 VVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~--~~~~~~~gc 158 (178)
T 1gml_A 81 VVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGD--EYFTFITDC 158 (178)
T ss_dssp EEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETT--EEEEEEEEE
T ss_pred EEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECC--eEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999 99999999996 899999999
Q ss_pred CCCceEEEEEecCCHH
Q 009425 374 ANSRAVTIFIRGGNKM 389 (535)
Q Consensus 374 ~~~~~~TI~l~G~t~~ 389 (535)
+++++|||+|||++.+
T Consensus 159 ~~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 159 KDPKACTILLRGASHH 174 (178)
T ss_dssp SSTTSCEEEEEC----
T ss_pred CCCCEEEEEEECCCcc
Confidence 9999999999999865
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=100.00 E-value=2.7e-33 Score=250.75 Aligned_cols=154 Identities=40% Similarity=0.643 Sum_probs=148.9
Q ss_pred EeEEEEeccCCCCCCCcccccceEEEEecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEecC
Q 009425 221 IYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQW 300 (535)
Q Consensus 221 i~Giv~~~~~~~~~~~~~~~~~kI~ll~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~lvi~~~ 300 (535)
++|++|++++.++.||++++||||++++|+|+++++++++++.++++++++.+.++|+++++..+++|.+.|+|||++++
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k 80 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK 80 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESS
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCeeccCCCCCCCCCceeeeeEEEEEecCccceEEEEEecCCC
Q 009425 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANS 376 (535)
Q Consensus 301 ~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~ 376 (535)
+|+|.|++||.++||++++++++++|+|||++|||++++++++++++.+|+|+.|++.++|+ ++|++|++|++.
T Consensus 81 ~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~--~~~~~~~g~~~~ 154 (159)
T 1ass_A 81 GIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGD--DRMTFVMGCKNH 154 (159)
T ss_dssp CBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETT--EEEEEEESCC--
T ss_pred ccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECC--eEEEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999997 899999999864
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.37 E-value=8.8e-13 Score=117.65 Aligned_cols=144 Identities=24% Similarity=0.333 Sum_probs=108.7
Q ss_pred ceeEeEEEEeccCCCCCCCccc-------ccceEEEEecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHH
Q 009425 218 TELIYGITVDKDMSHPQMPKRI-------ENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKD 290 (535)
Q Consensus 218 s~li~Giv~~~~~~~~~~~~~~-------~~~kI~ll~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~ 290 (535)
.++++|+.|+++|.+|+|.+.. +||.|++. +-++++..++ .++++++.+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILit-------------dkKIs~i~~i-----------lP~LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLH-------------QDKISSLPDL-----------LPLLEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEB-------------SSEECCHHHH-----------HHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEE-------------cCccCCHHHH-----------HHHHHHHHH
Confidence 4678999999999999987654 45555552 2347888886 689999999
Q ss_pred cCCcEEEecCCCCHHHHHHHHhCCCc------EEeec-----ChhHHHHHHHHhCCeeccC-----CCCCCCCCceeeee
Q 009425 291 VGATLVICQWGFDDEANHLLMHRNLP------AVRWV-----GGVELELIAIATGGRIVPR-----FQELTPEKLGKAGL 354 (535)
Q Consensus 291 ~~~~lvi~~~~i~~~al~~l~~~~I~------~i~~v-----~~~~L~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~ 354 (535)
.+.||+|++++|+.+|+..|.-|++. +++.. ++..|++||.+||+++++. +++.+.++||+|++
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~ 137 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARR 137 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccE
Confidence 99999999999999999998876543 45544 4788999999999999984 67888889999999
Q ss_pred EEEEEecCccceEEEEEecCCCceEEEEEec-CCHHHHHHHHHHHHHHHH
Q 009425 355 VREKSFGTTQDRMLYIEHCANSRAVTIFIRG-GNKMMIEETKRSIHDALC 403 (535)
Q Consensus 355 v~~~~~g~~~~~~~~~~~~~~~~~~TI~l~G-~t~~~l~e~~~~l~dal~ 403 (535)
+.+. ++. |.+++| ++...++++...+...+.
T Consensus 138 v~vt-----kd~-------------T~iv~G~g~~~~I~~Rv~qIr~~ie 169 (194)
T 3m6c_A 138 VVVS-----KDD-------------TVIVDGGGTAEAVANRAKHLRAEID 169 (194)
T ss_dssp EEEC-----SSC-------------EEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred EEEc-----CCc-------------eEEecCCCCHHHHHHHHHHHHHHHH
Confidence 9864 122 444433 456666666655555543
No 30
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.34 E-value=1.1e-12 Score=111.66 Aligned_cols=121 Identities=26% Similarity=0.321 Sum_probs=96.0
Q ss_pred EEEEeccCCCCCCCcccc-------cceEEEEecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcE
Q 009425 223 GITVDKDMSHPQMPKRIE-------NAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATL 295 (535)
Q Consensus 223 Giv~~~~~~~~~~~~~~~-------~~kI~ll~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~l 295 (535)
|+.|+++|.+|+|.+..+ ||.|++.+ -++++..++ .++++++.+.+.+|
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitd-------------kKIs~i~~l-----------lP~LE~v~~~~~pL 56 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVE-------------KKVSNVREL-----------LPILEQVAQTGKPL 56 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEES-------------SEECCHHHH-----------HHHHHHHHTTTCCE
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEec-------------ccccCHHHH-----------HHHHHHHHHHCCCE
Confidence 799999999999977543 55555532 247888886 68999999999999
Q ss_pred EEecCCCCHHHHHHHHhCCCc------EEeec-----ChhHHHHHHHHhCCeeccC-----CCCCCCCCceeeeeEEEEE
Q 009425 296 VICQWGFDDEANHLLMHRNLP------AVRWV-----GGVELELIAIATGGRIVPR-----FQELTPEKLGKAGLVREKS 359 (535)
Q Consensus 296 vi~~~~i~~~al~~l~~~~I~------~i~~v-----~~~~L~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~ 359 (535)
+|++++|+.+|+..|.-|++. +++.. ++..|++||.+||+++++. +++.+.++||+|+++.+.
T Consensus 57 lIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vt- 135 (145)
T 1srv_A 57 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRIT- 135 (145)
T ss_dssp EEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEEC-
T ss_pred EEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEc-
Confidence 999999999999999876543 45543 5889999999999999984 567778899999999874
Q ss_pred ecCccceEEEEEe
Q 009425 360 FGTTQDRMLYIEH 372 (535)
Q Consensus 360 ~g~~~~~~~~~~~ 372 (535)
++..+++.|
T Consensus 136 ----kd~TtIv~G 144 (145)
T 1srv_A 136 ----KDETTIVGG 144 (145)
T ss_dssp ----SSCEEEEEE
T ss_pred ----CCCeEEeCC
Confidence 355555543
No 31
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.28 E-value=4.6e-12 Score=113.28 Aligned_cols=140 Identities=24% Similarity=0.302 Sum_probs=106.8
Q ss_pred eEEEEeccCCCCCCCccc-------ccceEEEEecCCCCCCCCCcceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 009425 222 YGITVDKDMSHPQMPKRI-------ENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGAT 294 (535)
Q Consensus 222 ~Giv~~~~~~~~~~~~~~-------~~~kI~ll~~~l~~~~~~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~i~~~~~~ 294 (535)
+|+.|+++|.+|+|.+.. +||.|++ ++-+|++..++ .++++++.+.+.|
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILi-------------tdkKIs~i~~i-----------lP~LE~v~~~~rp 68 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILL-------------VDKKISNIREL-----------LPVLEGVAKASKP 68 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEE-------------EEEEECCHHHH-----------HHHHHHHHTSSCC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEE-------------EcCccCCHHHH-----------HHHHHHHHHhCCC
Confidence 699999999999998754 4555555 44568888886 6899999999999
Q ss_pred EEEecCCCCHHHHHHHHhCCC------cEEeec-----ChhHHHHHHHHhCCeeccC-----CCCCCCCCceeeeeEEEE
Q 009425 295 LVICQWGFDDEANHLLMHRNL------PAVRWV-----GGVELELIAIATGGRIVPR-----FQELTPEKLGKAGLVREK 358 (535)
Q Consensus 295 lvi~~~~i~~~al~~l~~~~I------~~i~~v-----~~~~L~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~ 358 (535)
|+|++++|+.+|+..|.-|++ .+|+.. ++..|+|||.+||+++++. +++.+.++||+|+++.+.
T Consensus 69 LlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vt 148 (201)
T 3osx_A 69 LVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVIN 148 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEEC
T ss_pred eEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEc
Confidence 999999999999999887654 345544 4788999999999999984 677888899999999864
Q ss_pred EecCccceEEEEEecCCCceEEEEEec-CCHHHHHHHHHHHHHHHH
Q 009425 359 SFGTTQDRMLYIEHCANSRAVTIFIRG-GNKMMIEETKRSIHDALC 403 (535)
Q Consensus 359 ~~g~~~~~~~~~~~~~~~~~~TI~l~G-~t~~~l~e~~~~l~dal~ 403 (535)
+ +. |++++| ++...++++...+...+.
T Consensus 149 k-----d~-------------TtIv~G~G~~~~I~~Rv~qIr~qie 176 (201)
T 3osx_A 149 K-----DT-------------TTIIDGVGEEGAIAARVTQIRQQIE 176 (201)
T ss_dssp S-----SC-------------EEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred C-----Cc-------------eEEecCCCCHHHHHHHHHHHHHHHH
Confidence 1 22 444433 456666666655555543
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=72.09 E-value=9.2 Score=32.11 Aligned_cols=52 Identities=21% Similarity=0.279 Sum_probs=39.5
Q ss_pred HHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCe
Q 009425 284 MVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGR 336 (535)
Q Consensus 284 ~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 336 (535)
..+.|.+.++++||+. +|.+.+...|.++||.++.......-+-|.....+.
T Consensus 68 ~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 68 VPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp HHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 3556677899999985 799999999999999999876644445555555443
No 33
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=69.09 E-value=12 Score=30.58 Aligned_cols=53 Identities=26% Similarity=0.325 Sum_probs=39.9
Q ss_pred HHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCe
Q 009425 283 DMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGR 336 (535)
Q Consensus 283 ~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 336 (535)
...+.|.+.++++||+. ++.+.+...|.++||.++.......-+-+.....+.
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 34566677899999986 799999999999999999875544444455555443
No 34
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=63.65 E-value=14 Score=29.95 Aligned_cols=51 Identities=14% Similarity=0.079 Sum_probs=38.4
Q ss_pred HHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecCh-hHHHHHHHHhCC
Q 009425 284 MVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGG-VELELIAIATGG 335 (535)
Q Consensus 284 ~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~-~~L~~ia~~tGa 335 (535)
..+.+.+.++++|||. ++.+.+...|.++||.++..... ..-+-+.....+
T Consensus 59 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 4566667899999985 79999999999999999987554 444444444444
No 35
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=62.65 E-value=16 Score=29.81 Aligned_cols=52 Identities=21% Similarity=0.158 Sum_probs=39.1
Q ss_pred HHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCe
Q 009425 284 MVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGR 336 (535)
Q Consensus 284 ~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 336 (535)
..+.+.+.++++||+. ++.+.+...|.++||.++.......-+-|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 3555667899999996 699999999999999999875544444455544443
No 36
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=57.83 E-value=23 Score=29.58 Aligned_cols=52 Identities=10% Similarity=0.122 Sum_probs=38.4
Q ss_pred HHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCe
Q 009425 283 DMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGR 336 (535)
Q Consensus 283 ~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 336 (535)
...+.+.+.++++||+. ++.+.+...|.+ ||.++.......-+.+.....+.
T Consensus 70 ~~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 70 FMLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 34566677899999985 799999999999 99999876534444444444443
No 37
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=52.41 E-value=18 Score=29.14 Aligned_cols=52 Identities=25% Similarity=0.316 Sum_probs=38.9
Q ss_pred HHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCCe
Q 009425 284 MVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGR 336 (535)
Q Consensus 284 ~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 336 (535)
..+.+.+.++++||+. ++.+.+...|.++||.++.......-+-+.....+.
T Consensus 54 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 3455667899999985 699999999999999999876544445555555543
No 38
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=47.72 E-value=47 Score=26.00 Aligned_cols=48 Identities=13% Similarity=0.166 Sum_probs=35.8
Q ss_pred HHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 286 QKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 286 ~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
+.+.+.++++|++ +++.+.+...|.++ |.++.......-+-+.....+
T Consensus 50 ~~l~~~gv~~vi~-~~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g 97 (105)
T 2qtd_A 50 KSIVKENVNAIIC-KNISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEG 97 (105)
T ss_dssp HHHHHTCCSEEEE-SCCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTT
T ss_pred HHHHHCCCCEEEE-CCCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcC
Confidence 4455689999999 57999999999999 999986554444444444444
No 39
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=39.25 E-value=83 Score=25.79 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=36.0
Q ss_pred HHHHHHHHcCCcEEEecCCCCH-----HHHHHHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 283 DMVQKCKDVGATLVICQWGFDD-----EANHLLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 283 ~~v~~i~~~~~~lvi~~~~i~~-----~al~~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
..++.+.+-.+.+|+++.+.+| ....++.+++|.++.--++.+ |.+++|-
T Consensus 31 ~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~---LG~a~G~ 85 (126)
T 2xzm_U 31 EVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRAS---LGEYLGH 85 (126)
T ss_dssp HHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSHH---HHHHHTC
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHH---HHHHHCC
Confidence 3455566678899999999975 445678899999886555544 5566663
No 40
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=36.04 E-value=94 Score=25.17 Aligned_cols=50 Identities=12% Similarity=0.077 Sum_probs=36.3
Q ss_pred HHHHHHHHcCCcEEEecCCCCHH-----HHHHHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 283 DMVQKCKDVGATLVICQWGFDDE-----ANHLLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 283 ~~v~~i~~~~~~lvi~~~~i~~~-----al~~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
..++.+.+-.+.+||++.++++. ...+|.++||..+.--++.+ |..++|.
T Consensus 27 ~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~g~ 81 (121)
T 2lbw_A 27 EVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQD---LGAAGAT 81 (121)
T ss_dssp HHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHH---HHHHHTC
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHH---HHHHhCC
Confidence 34556666788999999999984 34578889999877666655 5555673
No 41
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=32.58 E-value=1.2e+02 Score=23.57 Aligned_cols=50 Identities=10% Similarity=0.118 Sum_probs=36.3
Q ss_pred HHHHHHHcCCcEEEecCCCCHHHHH----HHHhCCCcEEeecChhHHHHHHHHhCCe
Q 009425 284 MVQKCKDVGATLVICQWGFDDEANH----LLMHRNLPAVRWVGGVELELIAIATGGR 336 (535)
Q Consensus 284 ~v~~i~~~~~~lvi~~~~i~~~al~----~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 336 (535)
..+.+.+-.+.+||++.+.++.... ++..++|.++...++.+ |..++|-.
T Consensus 27 v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~e---LG~A~Gk~ 80 (101)
T 3v7q_A 27 VIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAV---LGRSIGKE 80 (101)
T ss_dssp HHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHHH---HHHHTTSS
T ss_pred hHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHHH---HHhhhCcc
Confidence 4555566678999999999986544 56788999888766655 56666754
No 42
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=31.30 E-value=84 Score=23.44 Aligned_cols=50 Identities=14% Similarity=0.019 Sum_probs=35.4
Q ss_pred HHHHHHHHcCCcEEEecCCCCHHHHH----HHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 283 DMVQKCKDVGATLVICQWGFDDEANH----LLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 283 ~~v~~i~~~~~~lvi~~~~i~~~al~----~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
+.++.+.+-.+.+|+++.++++.... ++.+++|.++.--++.+ |..++|-
T Consensus 18 ~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk~e---LG~a~Gk 71 (82)
T 3v7e_A 18 QTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKK---LGKACGI 71 (82)
T ss_dssp HHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH---HHHHHTC
T ss_pred HHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCHHH---HHHHhCC
Confidence 34555556678999999999987554 45778999888766655 5555564
No 43
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=31.10 E-value=97 Score=29.50 Aligned_cols=52 Identities=17% Similarity=0.107 Sum_probs=39.8
Q ss_pred HHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecC--------------------------hhHHHHHHHHhCCe
Q 009425 285 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVG--------------------------GVELELIAIATGGR 336 (535)
Q Consensus 285 v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~--------------------------~~~L~~ia~~tGa~ 336 (535)
+|+|...+|+|||.....++...+.|.+.||.++---. .+.++.++.++|..
T Consensus 77 ~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~e 154 (326)
T 3psh_A 77 IESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKK 154 (326)
T ss_dssp HHHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCCH
Confidence 56677889999998766677888899999998765211 35688889988854
No 44
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=28.77 E-value=1.2e+02 Score=23.62 Aligned_cols=51 Identities=16% Similarity=0.064 Sum_probs=35.6
Q ss_pred HHHHHHHHcCCcEEEecCCCCHHHHH----HHHhCCCcEEeecChhHHHHHHHHhCCe
Q 009425 283 DMVQKCKDVGATLVICQWGFDDEANH----LLMHRNLPAVRWVGGVELELIAIATGGR 336 (535)
Q Consensus 283 ~~v~~i~~~~~~lvi~~~~i~~~al~----~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 336 (535)
+..+.+.+-.+.+||++.+.++.... ++..++|.++...++.+ |..++|-.
T Consensus 25 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~~e---LG~a~Gk~ 79 (101)
T 3on1_A 25 QVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNRQM---LGRAIGKH 79 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH---HHHHTTSS
T ss_pred HHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCHHH---HHHHhCCc
Confidence 34555556678999999999986554 45678888887655554 55666653
No 45
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=27.40 E-value=82 Score=26.14 Aligned_cols=49 Identities=16% Similarity=0.072 Sum_probs=33.1
Q ss_pred HHHHHHHcCCcEEEecCCCCHH-----HHHHHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 284 MVQKCKDVGATLVICQWGFDDE-----ANHLLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 284 ~v~~i~~~~~~lvi~~~~i~~~-----al~~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
.++.+.+-.+.+|+++.++++. ...+|.+.||..+.--++. +|.+++|-
T Consensus 40 v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~---eLG~a~G~ 93 (134)
T 2ale_A 40 ATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRV---ALGRACGV 93 (134)
T ss_dssp HHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHH---HHHHHTTC
T ss_pred HHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHH---HHHHHhCC
Confidence 4555556678899999999885 4456777788766654444 45555664
No 46
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=25.48 E-value=1.4e+02 Score=27.03 Aligned_cols=52 Identities=8% Similarity=0.008 Sum_probs=38.9
Q ss_pred HHHHHHcCCcEEEecCCCC-HHHHHHHHhCCCcEEeec---C----hhHHHHHHHHhCCe
Q 009425 285 VQKCKDVGATLVICQWGFD-DEANHLLMHRNLPAVRWV---G----GVELELIAIATGGR 336 (535)
Q Consensus 285 v~~i~~~~~~lvi~~~~i~-~~al~~l~~~~I~~i~~v---~----~~~L~~ia~~tGa~ 336 (535)
+|+|...+|+|||...... +...+.|.+.||.++--- . .+.++.++.++|..
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQT 111 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHHHhCCH
Confidence 5677888999999877654 567788999998876431 2 45678888888853
No 47
>3oak_C Transcription elongation factor SPT6; transcription factor complex, nucleus; 2.15A {Saccharomyces cerevisiae}
Probab=25.38 E-value=50 Score=19.83 Aligned_cols=23 Identities=13% Similarity=0.073 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHhhhhhcCCCchhH
Q 009425 82 QIAKLMVELSRSQDYEIGDGTTGV 105 (535)
Q Consensus 82 P~~~ll~~~~~~~~~~~GDGttt~ 105 (535)
|+..| .++-....+.+|||+-..
T Consensus 2 ~~~~~-~~aledm~eiFGdG~dY~ 24 (31)
T 3oak_C 2 PFTHM-SDKIDEMYDIFGDGHDYD 24 (31)
T ss_dssp HHHHH-HHHHHHHHHHHCCSCTTH
T ss_pred cchhH-HHHHHHHHHHhCCCchhh
Confidence 44443 566677888999998654
No 48
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=25.00 E-value=1.7e+02 Score=22.87 Aligned_cols=50 Identities=14% Similarity=0.106 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCcEEEecCCCCHHHHH----HHHhCCCcEEe-ecChhHHHHHHHHhCC
Q 009425 283 DMVQKCKDVGATLVICQWGFDDEANH----LLMHRNLPAVR-WVGGVELELIAIATGG 335 (535)
Q Consensus 283 ~~v~~i~~~~~~lvi~~~~i~~~al~----~l~~~~I~~i~-~v~~~~L~~ia~~tGa 335 (535)
+.++.+.+-.+.+||++.+.++.... ++..++|.++. ..++.+ |..++|-
T Consensus 29 ~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~e---LG~a~Gk 83 (104)
T 4a18_G 29 STIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVE---LGTACGK 83 (104)
T ss_dssp HHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHH---HHHHTTC
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHH---HHHHhCC
Confidence 44556666778999999999985444 45567888885 555555 5666674
No 49
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=24.96 E-value=1.3e+02 Score=28.37 Aligned_cols=52 Identities=12% Similarity=0.114 Sum_probs=38.3
Q ss_pred HHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecC----hhHHHHHHHHhCCe
Q 009425 285 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVG----GVELELIAIATGGR 336 (535)
Q Consensus 285 v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~----~~~L~~ia~~tGa~ 336 (535)
+|+|...+|+|||.....++...+.|.+.+..++-... .+.++.+++++|-.
T Consensus 89 ~E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~e 144 (311)
T 2wi8_A 89 IEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKE 144 (311)
T ss_dssp HHHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTCH
T ss_pred HHHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCCH
Confidence 56677789999998766788888899988866544322 45678888888853
No 50
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=24.84 E-value=75 Score=29.08 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=36.5
Q ss_pred HHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEe-ec-C----hhHHHHHHHHhCC
Q 009425 285 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVR-WV-G----GVELELIAIATGG 335 (535)
Q Consensus 285 v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~-~v-~----~~~L~~ia~~tGa 335 (535)
+|+|...+|+|||.....++...+.|.+.+|.++- .. + .+.++.++.++|-
T Consensus 53 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~ 109 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNR 109 (260)
T ss_dssp HHHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 56677889999998766666777888888877543 11 1 3567778888885
No 51
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=24.63 E-value=1.8e+02 Score=23.09 Aligned_cols=50 Identities=12% Similarity=0.160 Sum_probs=34.3
Q ss_pred HHHHHHHHcCCcEEEecCCCCHHH----HHHHHhCCCcEEee-cChhHHHHHHHHhCC
Q 009425 283 DMVQKCKDVGATLVICQWGFDDEA----NHLLMHRNLPAVRW-VGGVELELIAIATGG 335 (535)
Q Consensus 283 ~~v~~i~~~~~~lvi~~~~i~~~a----l~~l~~~~I~~i~~-v~~~~L~~ia~~tGa 335 (535)
+.++.+.+-.+.+||++.+.++.. ..++..++|.++.- -++.+ |..++|-
T Consensus 33 ~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~e---LG~A~Gk 87 (112)
T 3iz5_f 33 TVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVD---LGTACGK 87 (112)
T ss_dssp HHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCT---HHHHHCT
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHH---HHHHhCC
Confidence 345566667789999999999854 44567788888776 55555 4444553
No 52
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=24.23 E-value=1.7e+02 Score=23.42 Aligned_cols=49 Identities=16% Similarity=0.116 Sum_probs=34.1
Q ss_pred HHHHHHHcCCcEEEecCCCCHH-----HHHHHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 284 MVQKCKDVGATLVICQWGFDDE-----ANHLLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 284 ~v~~i~~~~~~lvi~~~~i~~~-----al~~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
..+.+.+-.+.+|+++.++++. ...++.+++|..+...++.+ |..++|-
T Consensus 37 v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~e---LG~a~G~ 90 (120)
T 1vq8_F 37 TTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDD---LGHAAGL 90 (120)
T ss_dssp HHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCHHH---HHHHhCC
Confidence 4555556678899999999774 34577788888776666654 5555664
No 53
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=24.18 E-value=1.6e+02 Score=27.35 Aligned_cols=51 Identities=8% Similarity=-0.033 Sum_probs=38.3
Q ss_pred HHHHHHcCCcEEEecCCC-CHHHHHHHHhCCCcEEeec---C----hhHHHHHHHHhCC
Q 009425 285 VQKCKDVGATLVICQWGF-DDEANHLLMHRNLPAVRWV---G----GVELELIAIATGG 335 (535)
Q Consensus 285 v~~i~~~~~~lvi~~~~i-~~~al~~l~~~~I~~i~~v---~----~~~L~~ia~~tGa 335 (535)
+|+|...+|+|||..... ++...+.|.+.+|.++--- . .+.++.+++++|-
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~ 110 (283)
T 2r79_A 52 AEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGV 110 (283)
T ss_dssp HHHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCC
Confidence 566788899999986643 5677889999998776421 2 4568888888885
No 54
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=23.25 E-value=1.4e+02 Score=23.98 Aligned_cols=49 Identities=18% Similarity=0.127 Sum_probs=32.6
Q ss_pred HHHHHHHcCCcEEEecCCCCHH-----HHHHHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 284 MVQKCKDVGATLVICQWGFDDE-----ANHLLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 284 ~v~~i~~~~~~lvi~~~~i~~~-----al~~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
..+.+.+-.+.+||++.++++. ...++.+++|..+...++.+ |..++|-
T Consensus 37 v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~G~ 90 (120)
T 1xbi_A 37 VTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQD---LGKAAGL 90 (120)
T ss_dssp HHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCCHHH---HHHHhCC
Confidence 4555556678999999999874 33466777887766655544 4455554
No 55
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=22.31 E-value=1.4e+02 Score=24.72 Aligned_cols=49 Identities=16% Similarity=0.019 Sum_probs=33.9
Q ss_pred HHHHHHHcCCcEEEecCCCCHHHH-----HHHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 284 MVQKCKDVGATLVICQWGFDDEAN-----HLLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 284 ~v~~i~~~~~~lvi~~~~i~~~al-----~~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
..+.+.+-.+.+||++.++++.-. .++.+++|.++...++. .|..++|-
T Consensus 49 v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v~sk~---eLG~a~G~ 102 (135)
T 2aif_A 49 ATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSKV---ALGRACGV 102 (135)
T ss_dssp HHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEESCHH---HHHHHTTC
T ss_pred HHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEECCHH---HHHHHhCC
Confidence 344455556789999999988632 46778899888766664 45666664
No 56
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=21.97 E-value=78 Score=29.74 Aligned_cols=40 Identities=20% Similarity=0.307 Sum_probs=36.4
Q ss_pred HHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecC
Q 009425 283 DMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVG 322 (535)
Q Consensus 283 ~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~ 322 (535)
++++|....|+++|++-..-+..+.++..+.||+.+..++
T Consensus 206 EmV~Kaa~aGIpvlvS~SApTslAV~lA~~~giTLiGf~R 245 (268)
T 2pw9_A 206 DMVLKCARIGIPIIMSRTSPSSLGLALAKRSGATLVAYSR 245 (268)
T ss_dssp HHHHHHHHHTCCEEEESSCBCHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEcccccHHHHHHHHHcCCEEEEEec
Confidence 5788999999999999999999999999999999887665
No 57
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=21.96 E-value=1.5e+02 Score=26.82 Aligned_cols=51 Identities=12% Similarity=-0.049 Sum_probs=37.2
Q ss_pred HHHHHHcCCcEEEecCC-CCHHHHHHHHhCCCcEEee--c--C----hhHHHHHHHHhCC
Q 009425 285 VQKCKDVGATLVICQWG-FDDEANHLLMHRNLPAVRW--V--G----GVELELIAIATGG 335 (535)
Q Consensus 285 v~~i~~~~~~lvi~~~~-i~~~al~~l~~~~I~~i~~--v--~----~~~L~~ia~~tGa 335 (535)
+|+|...+|+|||.... .++...+.|.+.+|.++-- . . .+.++.++.++|-
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~~~g~ 111 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQV 111 (256)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHHhCC
Confidence 56777889999998654 4677888999999876542 1 2 2357778888885
No 58
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=21.88 E-value=1.6e+02 Score=27.63 Aligned_cols=62 Identities=11% Similarity=0.032 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeecC----hhHHHHHHHHhCCeec
Q 009425 275 QQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVG----GVELELIAIATGGRIV 338 (535)
Q Consensus 275 ~~E~~~l~~~v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v~----~~~L~~ia~~tGa~ii 338 (535)
++|++++.+.++.+.+ .++.|+=....+.+.....++|...+..++ ...+-.++.-.|+.++
T Consensus 64 eeE~~Rv~pvi~~l~~--~~v~iSIDT~~~~Va~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~v 129 (270)
T 4hb7_A 64 EEELNRVLPVVEAIVG--FDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEII 129 (270)
T ss_dssp HHHHHHHHHHHHHHTT--SSSEEEEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHhhc--CCCeEEEECCCHHHHHHHHHhccceeccccccccchhHHHHHHHcCCCeE
Confidence 3467788999999975 456677678888888877788887777664 2355555555666555
No 59
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=21.42 E-value=1.8e+02 Score=23.44 Aligned_cols=49 Identities=18% Similarity=0.093 Sum_probs=32.3
Q ss_pred HHHHHHHcCCcEEEecCCCCHH-----HHHHHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 284 MVQKCKDVGATLVICQWGFDDE-----ANHLLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 284 ~v~~i~~~~~~lvi~~~~i~~~-----al~~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
..+.+.+-.+.+||++.++++. ...++.+++|..+...++.+ |..++|-
T Consensus 36 v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~sk~e---LG~a~G~ 89 (124)
T 2fc3_A 36 TTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKR---LGEAAGI 89 (124)
T ss_dssp HHHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECCHHH---HHHHhCC
Confidence 3455555668899999999774 33567778888766666554 4455553
No 60
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=20.41 E-value=1.1e+02 Score=27.55 Aligned_cols=50 Identities=14% Similarity=0.088 Sum_probs=33.7
Q ss_pred HHHHHHcCCcEEEecC-CCCHHHHHHHHhCCCcEEeec--C----hhHHHHHHHHhC
Q 009425 285 VQKCKDVGATLVICQW-GFDDEANHLLMHRNLPAVRWV--G----GVELELIAIATG 334 (535)
Q Consensus 285 v~~i~~~~~~lvi~~~-~i~~~al~~l~~~~I~~i~~v--~----~~~L~~ia~~tG 334 (535)
+|+|...+|+|||... ..++...+.|.+.+|.++--- . .+.++.+++++|
T Consensus 50 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg 106 (245)
T 1n2z_A 50 LERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSP 106 (245)
T ss_dssp HHHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCCSHHHHHHHHHHHGGGCS
T ss_pred HHHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 5667788999999853 467778888999898876421 1 233455555555
No 61
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=20.35 E-value=1.3e+02 Score=29.00 Aligned_cols=51 Identities=16% Similarity=0.171 Sum_probs=33.7
Q ss_pred HHHHHHcCCcEEEecCCCCHHHHHHHHhCCCcEEeec-C----------hhHHHHHHHHhCC
Q 009425 285 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV-G----------GVELELIAIATGG 335 (535)
Q Consensus 285 v~~i~~~~~~lvi~~~~i~~~al~~l~~~~I~~i~~v-~----------~~~L~~ia~~tGa 335 (535)
+|+|...+|+|||....-.+...+.+...||.++--- . .+.++.++.++|.
T Consensus 89 ~E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~~~~~~~~~~~~~~~i~~lG~~lG~ 150 (346)
T 2etv_A 89 LESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSYGNLGTFEDEDLFRSIELAGXILGR 150 (346)
T ss_dssp HHHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEECCCCTTCSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEecCccCcccHHHHHHHHHHHHHHcCC
Confidence 5566677899999765433455567777788765421 0 4557777887775
No 62
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=20.21 E-value=2e+02 Score=23.18 Aligned_cols=49 Identities=16% Similarity=0.018 Sum_probs=33.7
Q ss_pred HHHHHHHcCCcEEEecCCCCHH-----HHHHHHhCCCcEEeecChhHHHHHHHHhCC
Q 009425 284 MVQKCKDVGATLVICQWGFDDE-----ANHLLMHRNLPAVRWVGGVELELIAIATGG 335 (535)
Q Consensus 284 ~v~~i~~~~~~lvi~~~~i~~~-----al~~l~~~~I~~i~~v~~~~L~~ia~~tGa 335 (535)
..+.+.+-.+.+|+++.+.++. ...++.++||..+..-++.+ |..++|-
T Consensus 39 v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~Gk 92 (122)
T 3o85_A 39 ALKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVFIGSKNA---LGRACNV 92 (122)
T ss_dssp HHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHH---HHHHhCC
Confidence 4455555678899999999764 33467888888777666654 5556664
Done!