BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009426
(535 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IYG|Z Chain Z, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 517
Score = 635 bits (1638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/523 (60%), Positives = 403/523 (77%), Gaps = 8/523 (1%)
Query: 8 PNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQ 67
P AEV AAL +NI+AA+GLQDVL+TNLGPKGT+KMLV GAGDIKLTKDGN LL EMQ
Sbjct: 1 PKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQ 60
Query: 68 IQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKR 127
IQ+PTA +IA+ A AQDDI+GDGTTS V+ IGEL+KQ++ I EG+HPR++ +GFE AK
Sbjct: 61 IQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKE 120
Query: 128 ATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEE 187
LQFLE+ K + E D+E L VART+LRTK++ LAD LT+ VV+++L I+K +E
Sbjct: 121 KALQFLEQVK----VSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDE 176
Query: 188 AIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEV 247
IDLFMVE+M M+HK + DT L+ GLVLDHG+RHPDMK+R E+ YILTCNVSLEYEK+EV
Sbjct: 177 PIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 236
Query: 248 NAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXX 307
N+GFFY +AE+RE +V AER+ ++++V++IIELK KVC +D FVVINQKGIDP S
Sbjct: 237 NSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDA 296
Query: 308 XXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGC-LGWAGLVYEHVLGEEKYTFV 366
NMERL LACGG A+NS+DDL P C LG AG VYE+ LGEEK+TF+
Sbjct: 297 LAKEGIIALRRAKRRNMERLTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFI 355
Query: 367 ENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLV 426
E NP S T+LIKGPN HT+ QIKDA+RDGLRAVKN I+D VV GAGA EVA + LV
Sbjct: 356 EKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALV 415
Query: 427 NEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGNIVGLNQH 485
+ K +V+GRAQLGV+AFADALL++PK LA+N+G D Q+ ++ ++ EH + G +VG++ +
Sbjct: 416 -KYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLN 474
Query: 486 SGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 528
+G+P+ GI+DNY VK+Q+++S VIA+ +LLVDE++RAG
Sbjct: 475 TGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRAG 517
>pdb|3P9D|F Chain F, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|N Chain N, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|FF Chain f, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|NN Chain n, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|F Chain F, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|N Chain N, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|FF Chain f, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|NN Chain n, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 546
Score = 550 bits (1417), Expect = e-157, Method: Compositional matrix adjust.
Identities = 284/545 (52%), Positives = 384/545 (70%), Gaps = 11/545 (2%)
Query: 1 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGN 60
MSL++LNP AE L + AAL +N+ +A+GLQ VL+TNLGPKGT+KMLV GAG+IKLTKDG
Sbjct: 1 MSLQLLNPKAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGK 60
Query: 61 TLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVD 120
LL EMQIQ+PTA++IAR A AQD+I+GDGTT+ V +GEL++Q+ R I EG+HPR++ D
Sbjct: 61 VLLTEMQIQSPTAVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITD 120
Query: 121 GFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVL 180
GFEIA++ +++FL++FK D+E L VAR++L TK+ L + LT IV +AVL
Sbjct: 121 GFEIARKESMKFLDEFKISKT-NLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVL 179
Query: 181 CIRKPE-EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVS 239
+ + + +DL MVE+M M+H DT ++GLVLDHG RHPDM R +N Y+L NVS
Sbjct: 180 SVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVS 239
Query: 240 LEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGN-DNNFVVINQK 298
LEYEK+EVN+GFFYS+A+QR+ + A+ER+ VD K+++II+LKN+VC + D FV+INQK
Sbjct: 240 LEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQK 299
Query: 299 GIDPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVL 358
GIDP+S NMERL L GGEA NSV+DL+P LG++GLVY+ +
Sbjct: 300 GIDPMSLDVFAKHNILALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETI 359
Query: 359 GEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFE 418
GEEK+T+V +P SCTILIKG + +AQ KDAVRDGLRAV N ++D+ ++ GAGAF
Sbjct: 360 GEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFY 419
Query: 419 VAARQYL--VNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGE--- 473
+A +YL N K +G+ + G+EAFA+ALLV+PKTL +N+G D DV+ ++ E
Sbjct: 420 IALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDD 479
Query: 474 ---HDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRN 530
D VG++ + GD DP +EGI+D+Y V R I IAS LLL DE++RAGR+
Sbjct: 480 AQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRS 539
Query: 531 MRKPT 535
K T
Sbjct: 540 TLKET 544
>pdb|1Q3R|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
pdb|1Q3R|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
pdb|1Q3R|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
pdb|1Q3R|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
Length = 548
Score = 281 bits (720), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 181/516 (35%), Positives = 286/516 (55%), Gaps = 21/516 (4%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A +NI AA+ + + ++T LGPKG KMLV GDI +T DG T+L ++ +Q+P A M+
Sbjct: 24 AQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMV 83
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
A QD +GDGTT+ V+ GEL++++E +D+ +HP ++ G+ +A + L++
Sbjct: 84 EVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIA 143
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEA---IDLFMV 194
V D D+E L +A T++ K ES + L + V AV + + ++ +DL +
Sbjct: 144 IRV---DPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNI 200
Query: 195 ELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYS 254
+ + ++ LV G+V+D HP M +R EN I N +LE +K+E +A +
Sbjct: 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINIT 260
Query: 255 NAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXX 314
+ +Q + + E + + + V I + +G + FV QKGID L+
Sbjct: 261 SPDQLMSFLEQEEKMLKDMVDHIAQ------TGANVVFV---QKGIDDLAQHYLAKYGIM 311
Query: 315 XXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHS 374
+ME+L A G + V +V DLTP LG+A +V E L E FVE KNP +
Sbjct: 312 AVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKA 371
Query: 375 CTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGA--FEVAARQYLVNEVKKT 432
TILI+G +H I +++ A+ D ++ VK+ +ED AV+ GA E+A R ++E K
Sbjct: 372 VTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIR---LDEYAKQ 428
Query: 433 VEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGNIVGLNQHSGDPID 491
V G+ L +E FADAL ++PKTLAENAGLDT ++++ + EH +RG +G++ G P D
Sbjct: 429 VGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPAD 488
Query: 492 PQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
+GI + VK+Q I S A +L +D+VI A
Sbjct: 489 MLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAA 524
>pdb|1Q3S|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|E Chain E, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|F Chain F, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|G Chain G, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|H Chain H, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
Length = 548
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 286/516 (55%), Gaps = 21/516 (4%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A +NI AA+ + + ++T LGPKG KMLV GDI +T D T+L ++ +Q+P A M+
Sbjct: 24 AQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMV 83
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
A QD +GDGTT+ V+ GEL++++E +D+ +HP +++ G+ +A + L++
Sbjct: 84 EVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIA 143
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEA---IDLFMV 194
V D D+E L +A T++ K ES + L + V AV + + ++ +DL +
Sbjct: 144 IRV---DPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNI 200
Query: 195 ELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYS 254
+ + ++ LV G+V+D HP M +R EN I N +LE +K+E +A +
Sbjct: 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINIT 260
Query: 255 NAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXX 314
+ +Q + + E + + + V I + +G + FV QKGID L+
Sbjct: 261 SPDQLMSFLEQEEKMLKDMVDHIAQ------TGANVVFV---QKGIDDLAQHYLAKYGIM 311
Query: 315 XXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHS 374
+ME+L A G + V +V DLTP LG+A +V E L E FVE KNP +
Sbjct: 312 AVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKA 371
Query: 375 CTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGA--FEVAARQYLVNEVKKT 432
TILI+G +H I +++ A+ D ++ VK+ +ED AV+ GA E+A R ++E K
Sbjct: 372 VTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIR---LDEYAKQ 428
Query: 433 VEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGNIVGLNQHSGDPID 491
V G+ L +E FADAL ++PKTLAENAGLDT ++++ + EH +RG +G++ G P D
Sbjct: 429 VGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPAD 488
Query: 492 PQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
+GI + VK+Q I S A +L +D+VI A
Sbjct: 489 MLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAA 524
>pdb|1Q2V|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q2V|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q2V|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q2V|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q3Q|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
pdb|1Q3Q|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
pdb|1Q3Q|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
pdb|1Q3Q|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
Length = 548
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 285/516 (55%), Gaps = 21/516 (4%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A +NI AA+ + + ++T LGPKG KMLV GDI +T D T+L ++ +Q+P A M+
Sbjct: 24 AQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMV 83
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
A QD +GDGTT+ V+ GEL++++E +D+ +HP ++ G+ +A + L++
Sbjct: 84 EVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIA 143
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEA---IDLFMV 194
V D D+E L +A T++ K ES + L + V AV + + ++ +DL +
Sbjct: 144 IRV---DPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNI 200
Query: 195 ELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYS 254
+ + ++ LV G+V+D HP M +R EN I N +LE +K+E +A +
Sbjct: 201 KFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINIT 260
Query: 255 NAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXX 314
+ +Q + + E + + + V I + +G + FV QKGID L+
Sbjct: 261 SPDQLMSFLEQEEKMLKDMVDHIAQ------TGANVVFV---QKGIDDLAQHYLAKYGIM 311
Query: 315 XXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHS 374
+ME+L A G + V +V DLTP LG+A +V E L E FVE KNP +
Sbjct: 312 AVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKA 371
Query: 375 CTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGA--FEVAARQYLVNEVKKT 432
TILI+G +H I +++ A+ D ++ VK+ +ED AV+ GA E+A R ++E K
Sbjct: 372 VTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIR---LDEYAKQ 428
Query: 433 VEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGNIVGLNQHSGDPID 491
V G+ L +E FADAL ++PKTLAENAGLDT ++++ + EH +RG +G++ G P D
Sbjct: 429 VGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPAD 488
Query: 492 PQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
+GI + VK+Q I S A +L +D+VI A
Sbjct: 489 MLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAA 524
>pdb|3KO1|A Chain A, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|B Chain B, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|C Chain C, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|D Chain D, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|E Chain E, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|F Chain F, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|G Chain G, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|H Chain H, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|I Chain I, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
Length = 553
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 169/517 (32%), Positives = 286/517 (55%), Gaps = 18/517 (3%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A+ NI A K +++ LK+ GP+G KMLV GDI +T DG T+L +M +Q+P A ++
Sbjct: 31 AVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLV 90
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
+ A QD+ + DGT + VIF GEL+K++E + + +HP +++ G++ A+ LQ +++
Sbjct: 91 QIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELA 150
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCI---RKPEEAIDLFMV 194
V + D ++L+ +A T+L +K + + DIVV AV + R + +DL +
Sbjct: 151 QTVSIN---DTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNI 207
Query: 195 ELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYS 254
+++ DT+LV G+V+D HP M +R EN I + SLE EK E++A +
Sbjct: 208 QIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDASLEVEKPELDAEIRIN 267
Query: 255 NAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXX 314
+ Q + + E + EKV +I+ +G + V+I QKGID ++
Sbjct: 268 DPTQMQKFLDEEENLIKEKVDKIL------ATGAN---VIICQKGIDEVAQSYLAKKGVL 318
Query: 315 XXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHS 374
++E+L A GG V+++D+++ LG+A L+ E +GE+K FVE KNP S
Sbjct: 319 AVRRAKKSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKS 378
Query: 375 CTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVE 434
+ILI+G + + + + A+RD L V + I+D + G GA E+ + L + V
Sbjct: 379 ISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKL-RKYAPQVG 437
Query: 435 GRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGN--IVGLNQHSGDPIDP 492
G+ QL VEA+A+AL + L ENAG D D+++ L+ H+ N G++ ++G P+D
Sbjct: 438 GKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDM 497
Query: 493 QMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 529
+G+ + VK I + A+ +L +D+V+ AG+
Sbjct: 498 WQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGK 534
>pdb|1A6D|A Chain A, Thermosome From T. Acidophilum
pdb|1A6E|A Chain A, Thermosome-Mg-Adp-Alf3 Complex
Length = 545
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/513 (34%), Positives = 275/513 (53%), Gaps = 19/513 (3%)
Query: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
NI AAK + D ++T LGPKG KMLV GDI ++ DG T+LKEM +++PTA MI +
Sbjct: 27 NIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSK 86
Query: 82 AQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 141
AQD GDGTT+ V+ GEL+KQ+E +D+G+HP V+ +G+ +A + +++ +
Sbjct: 87 AQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDE-----I 141
Query: 142 MGDEPDKEILKMVARTTLRTKLYESLADQLTDIV---VNAVLCIRKPEEAIDLFMVELMH 198
D L+ +A T L K D L D+V VNAV +R + +D +++
Sbjct: 142 AEKSTDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDK 201
Query: 199 MRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQ 258
DT+ + G+V+D H M +N I + +LE +K+E+ A S+ +
Sbjct: 202 KNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSK 261
Query: 259 REAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXXX 318
+ + E + V +I K N VV+ QKGID ++
Sbjct: 262 IQDFLNQETNTFKQMVEKI-----KKSGAN----VVLCQKGIDDVAQHYLAKEGIYAVRR 312
Query: 319 XXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTIL 378
+ME+L A G + V +DDLTP LG A V E +G+++ TFV KNP + +IL
Sbjct: 313 VKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSIL 372
Query: 379 IKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQ 438
I+G DH +++++ A+ D +R V T ED + G GA E L + +V GR Q
Sbjct: 373 IRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLA-KYANSVGGREQ 431
Query: 439 LGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNI-VGLNQHSGDPIDPQMEGI 497
L +EAFA AL ++P+TLAENAG+D + +I LK + ++G I VG++ + D + +G+
Sbjct: 432 LAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGV 491
Query: 498 FDNYSVKRQIINSGPVIASQLLLVDEVIRAGRN 530
D VK + S +A+ +L +D+VI + ++
Sbjct: 492 VDPLRVKTHALESAVEVATMILRIDDVIASKKS 524
>pdb|3IZH|A Chain A, Mm-Cpn D386a With Atp
pdb|3IZH|B Chain B, Mm-Cpn D386a With Atp
pdb|3IZH|C Chain C, Mm-Cpn D386a With Atp
pdb|3IZH|D Chain D, Mm-Cpn D386a With Atp
pdb|3IZH|E Chain E, Mm-Cpn D386a With Atp
pdb|3IZH|F Chain F, Mm-Cpn D386a With Atp
pdb|3IZH|G Chain G, Mm-Cpn D386a With Atp
pdb|3IZH|H Chain H, Mm-Cpn D386a With Atp
pdb|3IZH|I Chain I, Mm-Cpn D386a With Atp
pdb|3IZH|J Chain J, Mm-Cpn D386a With Atp
pdb|3IZH|K Chain K, Mm-Cpn D386a With Atp
pdb|3IZH|L Chain L, Mm-Cpn D386a With Atp
pdb|3IZH|M Chain M, Mm-Cpn D386a With Atp
pdb|3IZH|N Chain N, Mm-Cpn D386a With Atp
pdb|3IZH|O Chain O, Mm-Cpn D386a With Atp
pdb|3IZH|P Chain P, Mm-Cpn D386a With Atp
pdb|3IZM|A Chain A, Mm-Cpn Wildtype With Atp
pdb|3IZM|B Chain B, Mm-Cpn Wildtype With Atp
pdb|3IZM|C Chain C, Mm-Cpn Wildtype With Atp
pdb|3IZM|D Chain D, Mm-Cpn Wildtype With Atp
pdb|3IZM|E Chain E, Mm-Cpn Wildtype With Atp
pdb|3IZM|F Chain F, Mm-Cpn Wildtype With Atp
pdb|3IZM|G Chain G, Mm-Cpn Wildtype With Atp
pdb|3IZM|H Chain H, Mm-Cpn Wildtype With Atp
pdb|3IZM|I Chain I, Mm-Cpn Wildtype With Atp
pdb|3IZM|J Chain J, Mm-Cpn Wildtype With Atp
pdb|3IZM|K Chain K, Mm-Cpn Wildtype With Atp
pdb|3IZM|L Chain L, Mm-Cpn Wildtype With Atp
pdb|3IZM|M Chain M, Mm-Cpn Wildtype With Atp
pdb|3IZM|N Chain N, Mm-Cpn Wildtype With Atp
pdb|3IZM|O Chain O, Mm-Cpn Wildtype With Atp
pdb|3IZM|P Chain P, Mm-Cpn Wildtype With Atp
Length = 513
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 167/512 (32%), Positives = 267/512 (52%), Gaps = 15/512 (2%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A MNI A + + + +++ LGPKG KMLV GD+ +T DG T+L+EM +++P A M+
Sbjct: 14 AQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLI 73
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A + + L+
Sbjct: 74 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIA 133
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELM 197
V DKEIL +A T++ K E ++L +I+V AV + E +D ++++
Sbjct: 134 CEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIE 190
Query: 198 HMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAE 257
DT L++G+++D M ++ + I N ++E +++E +A ++
Sbjct: 191 KKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITDPA 250
Query: 258 QREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXX 317
+ + E + + + V I K N V+ QKGID L+
Sbjct: 251 KLMEFIEQEEKMLKDMVAEI-----KASGAN----VLFCQKGIDDLAQHYLAKEGIVAAR 301
Query: 318 XXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTI 377
+ME+L A G + ++ DL+ LG AGLV E + + FVE K+P + T+
Sbjct: 302 RVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTM 361
Query: 378 LIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRA 437
LI+G +H I ++ AV D + V TIED +V G G+ EV L E + + GR
Sbjct: 362 LIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL-REYAEGISGRE 420
Query: 438 QLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLNQHSGDPIDPQME 495
QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN +G D
Sbjct: 421 QLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCEN 480
Query: 496 GIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
G+ + VK Q I S LL +D+VI A
Sbjct: 481 GVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 512
>pdb|3LOS|A Chain A, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|B Chain B, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|C Chain C, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|D Chain D, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|E Chain E, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|F Chain F, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|G Chain G, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|H Chain H, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|I Chain I, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|J Chain J, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|K Chain K, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|L Chain L, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|M Chain M, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|N Chain N, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|O Chain O, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|P Chain P, Atomic Model Of Mm-Cpn In The Closed State
pdb|3KFB|A Chain A, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|B Chain B, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|C Chain C, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|D Chain D, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|E Chain E, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|F Chain F, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|G Chain G, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|H Chain H, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3RUQ|A Chain A, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|B Chain B, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|C Chain C, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|D Chain D, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
Length = 543
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 167/512 (32%), Positives = 267/512 (52%), Gaps = 15/512 (2%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A MNI A + + + +++ LGPKG KMLV GD+ +T DG T+L+EM +++P A M+
Sbjct: 20 AQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLI 79
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A + + L+
Sbjct: 80 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIA 139
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELM 197
V DKEIL +A T++ K E ++L +I+V AV + E +D ++++
Sbjct: 140 CEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIE 196
Query: 198 HMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAE 257
DT L++G+++D M ++ + I N ++E +++E +A ++
Sbjct: 197 KKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITDPA 256
Query: 258 QREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXX 317
+ + E + + + V I K N V+ QKGID L+
Sbjct: 257 KLMEFIEQEEKMLKDMVAEI-----KASGAN----VLFCQKGIDDLAQHYLAKEGIVAAR 307
Query: 318 XXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTI 377
+ME+L A G + ++ DL+ LG AGLV E + + FVE K+P + T+
Sbjct: 308 RVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTM 367
Query: 378 LIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRA 437
LI+G +H I ++ AV D + V TIED +V G G+ EV L E + + GR
Sbjct: 368 LIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL-REYAEGISGRE 426
Query: 438 QLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLNQHSGDPIDPQME 495
QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN +G D
Sbjct: 427 QLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCEN 486
Query: 496 GIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
G+ + VK Q I S LL +D+VI A
Sbjct: 487 GVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 518
>pdb|3RUS|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUV|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUW|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
Length = 543
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 266/512 (51%), Gaps = 15/512 (2%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A MNI A + + + +++ LGPKG KMLV GD+ +T DG T+L+EM +++P A M+
Sbjct: 20 AQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLI 79
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A + + L+
Sbjct: 80 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIA 139
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELM 197
V DKEIL +A T++ K E ++L +I+V AV + E +D ++++
Sbjct: 140 CEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIE 196
Query: 198 HMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAE 257
DT L++G+++D M ++ + I N ++E +++E +A ++
Sbjct: 197 KKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITDPA 256
Query: 258 QREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXX 317
+ + E + + + V I K N V+ QKGID L+
Sbjct: 257 KLMEFIEQEEKMLKDMVAEI-----KASGAN----VLFCQKGIDDLAQHYLAKEGIVAAR 307
Query: 318 XXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTI 377
+ME+L A G + ++ L+ LG AGLV E + + FVE K+P + T+
Sbjct: 308 RVKKSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTM 367
Query: 378 LIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRA 437
LI+G +H I ++ AV D + V TIED +V G G+ EV L E + + GR
Sbjct: 368 LIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL-REYAEGISGRE 426
Query: 438 QLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLNQHSGDPIDPQME 495
QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN +G D
Sbjct: 427 QLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCEN 486
Query: 496 GIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
G+ + VK Q I S LL +D+VI A
Sbjct: 487 GVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 518
>pdb|3IZI|A Chain A, Mm-Cpn Rls With Atp
pdb|3IZI|B Chain B, Mm-Cpn Rls With Atp
pdb|3IZI|C Chain C, Mm-Cpn Rls With Atp
pdb|3IZI|D Chain D, Mm-Cpn Rls With Atp
pdb|3IZI|E Chain E, Mm-Cpn Rls With Atp
pdb|3IZI|F Chain F, Mm-Cpn Rls With Atp
pdb|3IZI|G Chain G, Mm-Cpn Rls With Atp
pdb|3IZI|H Chain H, Mm-Cpn Rls With Atp
pdb|3IZI|I Chain I, Mm-Cpn Rls With Atp
pdb|3IZI|J Chain J, Mm-Cpn Rls With Atp
pdb|3IZI|K Chain K, Mm-Cpn Rls With Atp
pdb|3IZI|L Chain L, Mm-Cpn Rls With Atp
pdb|3IZI|M Chain M, Mm-Cpn Rls With Atp
pdb|3IZI|N Chain N, Mm-Cpn Rls With Atp
pdb|3IZI|O Chain O, Mm-Cpn Rls With Atp
pdb|3IZI|P Chain P, Mm-Cpn Rls With Atp
pdb|3IZJ|A Chain A, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|B Chain B, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|C Chain C, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|D Chain D, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|E Chain E, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|F Chain F, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|G Chain G, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|H Chain H, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|I Chain I, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|J Chain J, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|K Chain K, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|L Chain L, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|M Chain M, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|N Chain N, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|O Chain O, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|P Chain P, Mm-Cpn Rls With Atp And Alfx
Length = 513
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 266/512 (51%), Gaps = 15/512 (2%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A MNI A + + + +++ LGPKG KMLV GD+ +T DG T+L+EM +++P A M+
Sbjct: 14 AQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLI 73
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A + + L+
Sbjct: 74 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIA 133
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELM 197
V DKEIL +A T++ K E ++L +I+V AV + E +D ++++
Sbjct: 134 CEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIE 190
Query: 198 HMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAE 257
DT L++G+++D M ++ + I N ++E +++E +A ++
Sbjct: 191 KKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITDPA 250
Query: 258 QREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXX 317
+ + E + + + V I K N V+ QKGID L+
Sbjct: 251 KLMEFIEQEEKMLKDMVAEI-----KASGAN----VLFCQKGIDDLAQHYLAKEGIVAAR 301
Query: 318 XXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTI 377
+ME+L A G + ++ L+ LG AGLV E + + FVE K+P + T+
Sbjct: 302 RVKKSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTM 361
Query: 378 LIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRA 437
LI+G +H I ++ AV D + V TIED +V G G+ EV L E + + GR
Sbjct: 362 LIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL-REYAEGISGRE 420
Query: 438 QLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLNQHSGDPIDPQME 495
QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN +G D
Sbjct: 421 QLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCEN 480
Query: 496 GIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
G+ + VK Q I S LL +D+VI A
Sbjct: 481 GVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 512
>pdb|3IZN|A Chain A, Mm-Cpn Deltalid With Atp
pdb|3IZN|B Chain B, Mm-Cpn Deltalid With Atp
pdb|3IZN|C Chain C, Mm-Cpn Deltalid With Atp
pdb|3IZN|D Chain D, Mm-Cpn Deltalid With Atp
pdb|3IZN|E Chain E, Mm-Cpn Deltalid With Atp
pdb|3IZN|F Chain F, Mm-Cpn Deltalid With Atp
pdb|3IZN|G Chain G, Mm-Cpn Deltalid With Atp
pdb|3IZN|H Chain H, Mm-Cpn Deltalid With Atp
pdb|3IZN|I Chain I, Mm-Cpn Deltalid With Atp
pdb|3IZN|J Chain J, Mm-Cpn Deltalid With Atp
pdb|3IZN|K Chain K, Mm-Cpn Deltalid With Atp
pdb|3IZN|L Chain L, Mm-Cpn Deltalid With Atp
pdb|3IZN|M Chain M, Mm-Cpn Deltalid With Atp
pdb|3IZN|N Chain N, Mm-Cpn Deltalid With Atp
pdb|3IZN|O Chain O, Mm-Cpn Deltalid With Atp
pdb|3IZN|P Chain P, Mm-Cpn Deltalid With Atp
pdb|3J03|A Chain A, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|B Chain B, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|C Chain C, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|D Chain D, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|E Chain E, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|F Chain F, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|G Chain G, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|H Chain H, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|I Chain I, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|J Chain J, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|K Chain K, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|L Chain L, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|M Chain M, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|N Chain N, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|O Chain O, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|P Chain P, Lidless Mm-Cpn In The Closed State With AtpALFX
Length = 491
Score = 244 bits (623), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 169/512 (33%), Positives = 262/512 (51%), Gaps = 37/512 (7%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A MNI A + + + +++ LGPKG KMLV GD+ +T DG T+L+EM +++P A M+
Sbjct: 14 AQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLI 73
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A + + L+
Sbjct: 74 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIA 133
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELM 197
V DKEIL +A T++ K E ++L +I+V AV + E +D ++++
Sbjct: 134 CEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIE 190
Query: 198 HMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAE 257
DT L++G+++D M ++ + I N ++E SE+
Sbjct: 191 KKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETASEM---------- 240
Query: 258 QREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXX 317
+ MVA E+K SG + V+ QKGID L+
Sbjct: 241 -LKDMVA--------------EIK---ASGAN---VLFCQKGIDDLAQHYLAKEGIVAAR 279
Query: 318 XXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTI 377
+ME+L A G + ++ DL+ LG AGLV E + + FVE K+P + T+
Sbjct: 280 RVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTM 339
Query: 378 LIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRA 437
LI+G +H I ++ AV D + V TIED +V G G+ EV L E + + GR
Sbjct: 340 LIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL-REYAEGISGRE 398
Query: 438 QLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLNQHSGDPIDPQME 495
QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN +G D
Sbjct: 399 QLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCEN 458
Query: 496 GIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
G+ + VK Q I S LL +D+VI A
Sbjct: 459 GVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 490
>pdb|3IYF|A Chain A, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|B Chain B, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|C Chain C, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|D Chain D, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|E Chain E, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|F Chain F, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|G Chain G, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|H Chain H, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|I Chain I, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|J Chain J, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|K Chain K, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|L Chain L, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|M Chain M, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|N Chain N, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|O Chain O, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|P Chain P, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3KFE|A Chain A, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|B Chain B, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|C Chain C, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|D Chain D, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|E Chain E, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|F Chain F, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|G Chain G, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|H Chain H, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|A Chain A, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|B Chain B, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|C Chain C, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|D Chain D, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
Length = 521
Score = 244 bits (623), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 169/512 (33%), Positives = 262/512 (51%), Gaps = 37/512 (7%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A MNI A + + + +++ LGPKG KMLV GD+ +T DG T+L+EM +++P A M+
Sbjct: 20 AQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLI 79
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A + + L+
Sbjct: 80 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIA 139
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELM 197
V DKEIL +A T++ K E ++L +I+V AV + E +D ++++
Sbjct: 140 CEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIE 196
Query: 198 HMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAE 257
DT L++G+++D M ++ + I N ++E SE+
Sbjct: 197 KKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETASEM---------- 246
Query: 258 QREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXX 317
+ MVA E+K SG + V+ QKGID L+
Sbjct: 247 -LKDMVA--------------EIK---ASGAN---VLFCQKGIDDLAQHYLAKEGIVAAR 285
Query: 318 XXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTI 377
+ME+L A G + ++ DL+ LG AGLV E + + FVE K+P + T+
Sbjct: 286 RVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTM 345
Query: 378 LIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRA 437
LI+G +H I ++ AV D + V TIED +V G G+ EV L E + + GR
Sbjct: 346 LIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL-REYAEGISGRE 404
Query: 438 QLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLNQHSGDPIDPQME 495
QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN +G D
Sbjct: 405 QLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCEN 464
Query: 496 GIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
G+ + VK Q I S LL +D+VI A
Sbjct: 465 GVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 496
>pdb|3J02|A Chain A, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|B Chain B, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|C Chain C, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|D Chain D, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|E Chain E, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|F Chain F, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|G Chain G, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|H Chain H, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|I Chain I, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|J Chain J, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|K Chain K, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|L Chain L, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|M Chain M, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|N Chain N, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|O Chain O, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|P Chain P, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
Length = 491
Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 261/512 (50%), Gaps = 37/512 (7%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A MNI A + + + +++ LGPKG KMLV GD+ +T DG T+L+EM +++P A M+
Sbjct: 14 AQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLI 73
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A + + L+
Sbjct: 74 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIA 133
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELM 197
V DKEIL +A T++ K E ++L +I+V AV + E +D ++++
Sbjct: 134 CEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIE 190
Query: 198 HMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAE 257
DT L++G+++D M ++ + I N ++E SE+
Sbjct: 191 KKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETASEM---------- 240
Query: 258 QREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXX 317
+ MVA E+K SG + V+ QKGID L+
Sbjct: 241 -LKDMVA--------------EIK---ASGAN---VLFCQKGIDDLAQHYLAKEGIVAAR 279
Query: 318 XXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTI 377
+ME+L A G + ++ DL+ LG AGLV E + + FVE K+P + T+
Sbjct: 280 RVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTM 339
Query: 378 LIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRA 437
LI+G +H I ++ AV + V TIED +V G G+ EV L E + + GR
Sbjct: 340 LIRGTTEHVIEEVARAVDAAVGVVGCTIEDGRIVSGGGSTEVELSMKL-REYAEGISGRE 398
Query: 438 QLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLNQHSGDPIDPQME 495
QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN +G D
Sbjct: 399 QLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCEN 458
Query: 496 GIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
G+ + VK Q I S LL +D+VI A
Sbjct: 459 GVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 490
>pdb|1A6D|B Chain B, Thermosome From T. Acidophilum
pdb|1A6E|B Chain B, Thermosome-Mg-Adp-Alf3 Complex
Length = 543
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 271/512 (52%), Gaps = 17/512 (3%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A+ NI AA + + ++++LGP+G KMLV GDI +T DG T+LKEM +++P A M+
Sbjct: 22 AMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMV 81
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
+ QD GDGTT+ VI G L++Q++ I++ +HP V+ +G+ +A + +++
Sbjct: 82 EVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEIS 141
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDI---VVNAVLCIRKPEEAIDLFMV 194
T + G + +LKM A+T+L +K D+L +I V +V +R + +D +
Sbjct: 142 TKI--GADEKALLLKM-AQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNI 198
Query: 195 ELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYS 254
+++ + DT+L+ G+++D HP M ++ I + LE +K E +
Sbjct: 199 QVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDTNLRIE 258
Query: 255 NAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXX 314
+ + +A E + E V +I K N VVI QKGID ++
Sbjct: 259 DPSMIQKFLAQEENMLREMVDKI-----KSVGAN----VVITQKGIDDMAQHYLSRAGIY 309
Query: 315 XXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHS 374
+M++L A G V+++D+++ LG A V + +GE+ TFV KNP +
Sbjct: 310 AVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKA 369
Query: 375 CTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVE 434
+IL++G +H + +++ ++ D L V + +ED A G GA L + +K +
Sbjct: 370 VSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQK-IG 428
Query: 435 GRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGN-IVGLNQHSGDPIDPQ 493
GR QL +E FADA+ +P+ LAENAGLD D+++ L+ EH +GN G+N +G+ D
Sbjct: 429 GRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMV 488
Query: 494 MEGIFDNYSVKRQIINSGPVIASQLLLVDEVI 525
G+ + V +Q I S A +L +D+VI
Sbjct: 489 KNGVIEPIRVGKQAIESATEAAIMILRIDDVI 520
>pdb|3IZK|A Chain A, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|B Chain B, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|C Chain C, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|D Chain D, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|E Chain E, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|F Chain F, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|G Chain G, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|H Chain H, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|I Chain I, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|J Chain J, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|K Chain K, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|L Chain L, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|M Chain M, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|N Chain N, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|O Chain O, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|P Chain P, Mm-Cpn Rls Deltalid With Atp
pdb|3IZL|A Chain A, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|B Chain B, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|C Chain C, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|D Chain D, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|E Chain E, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|F Chain F, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|G Chain G, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|H Chain H, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|I Chain I, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|J Chain J, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|K Chain K, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|L Chain L, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|M Chain M, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|N Chain N, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|O Chain O, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|P Chain P, Mm-Cpn Rls Deltalid With Atp And Alfx
Length = 491
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 261/512 (50%), Gaps = 37/512 (7%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A MNI A + + + +++ LGPKG KMLV GD+ +T DG T+L+EM +++P A M+
Sbjct: 14 AQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLI 73
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A + + L+
Sbjct: 74 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIA 133
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELM 197
V DKEIL +A T++ K E ++L +I+V AV + E +D ++++
Sbjct: 134 CEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIE 190
Query: 198 HMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAE 257
DT L++G+++D M ++ + I N ++E SE+
Sbjct: 191 KKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETASEM---------- 240
Query: 258 QREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXX 317
+ MVA E+K SG + V+ QKGID L+
Sbjct: 241 -LKDMVA--------------EIK---ASGAN---VLFCQKGIDDLAQHYLAKEGIVAAR 279
Query: 318 XXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTI 377
+ME+L A G + ++ L+ LG AGLV E + + FVE K+P + T+
Sbjct: 280 RVKKSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTM 339
Query: 378 LIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRA 437
LI+G +H I ++ AV D + V TIED +V G G+ EV L E + + GR
Sbjct: 340 LIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL-REYAEGISGRE 398
Query: 438 QLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLNQHSGDPIDPQME 495
QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN +G D
Sbjct: 399 QLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCEN 458
Query: 496 GIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
G+ + VK Q I S LL +D+VI A
Sbjct: 459 GVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 490
>pdb|3AQ1|B Chain B, Open State Monomer Of A Group Ii Chaperonin From
Methanococcoides Burtonii
Length = 500
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 255/488 (52%), Gaps = 22/488 (4%)
Query: 45 MLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQ 104
MLV GDI +T DG T+LKEM IQ+P A MI + QD GDGTT+ + GEL+ +
Sbjct: 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSK 60
Query: 105 SERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKE-ILKMVARTTLRTKL 163
+E I +G+H ++ +G+ A + LE + PD E L +A T + K
Sbjct: 61 AEELIMKGVHSTIISEGYRHAAEKCREILETITIAI----SPDDEAALIKIAGTAITGKG 116
Query: 164 YESLADQLTDIVVNAVLCIRKPEE-AIDLFMVELMHMRHK----FDVDTRLVEGLVLDHG 218
E+ ++L+ + V AV I + EE + + ++E + + + D D+ L++GLV+D
Sbjct: 117 AEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSID-DSELIDGLVIDKE 175
Query: 219 SRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRII 278
HP+M + EN IL + +E+ K+EV++ ++ Q + + E EK+ R
Sbjct: 176 RSHPNMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQE-----EKMMR-- 228
Query: 279 ELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNS 338
E+ KV + N VV QKGID ++ +++RL G +
Sbjct: 229 EMAEKVIASGAN--VVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQD 286
Query: 339 VDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGL 398
+D +T +G AGLV E + K T+V +N + T+L+ G +H + + A+ D L
Sbjct: 287 LDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQNSKAVTVLLHGGTEHVVDSLDHALNDAL 346
Query: 399 RAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAEN 458
V IED VV+G G+ EV L +E T++GR QL V FA+AL V+P LAEN
Sbjct: 347 HVVGVVIEDGKVVVGGGSSEVELSLRL-SEYASTLKGREQLAVSKFAEALEVIPVALAEN 405
Query: 459 AGLDTQDVIIALKGEHDRGNI-VGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQ 517
AGLD D+++ L+ +H++GN GLN ++G+ +D + + +K Q IN+
Sbjct: 406 AGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVM 465
Query: 518 LLLVDEVI 525
+L +D+V+
Sbjct: 466 ILRIDDVV 473
>pdb|3IYG|G Chain G, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 515
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 260/511 (50%), Gaps = 20/511 (3%)
Query: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
NINAAK + D+++T LGPK +KML+ G I +T DGN +L+E+Q+Q+P A + +
Sbjct: 14 NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISR 73
Query: 82 AQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 141
QD+ GDGTTS +I GE++ +E +++ MHP V++ + A + L+K PV
Sbjct: 74 TQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPV- 132
Query: 142 MGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRH 201
D +++ + + +++ TK+ + +I ++AV ++ E ++
Sbjct: 133 --DTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVE 190
Query: 202 KFD----VDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAE 257
K D+ ++ G++++ HP M+R +N I+ + SLEY+K E + E
Sbjct: 191 KIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREE 250
Query: 258 QREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXX 317
++ E + + II+LK VVI +KGI L+
Sbjct: 251 DFTRILQMEEEYIQQLCEDIIQLKPD---------VVITEKGISDLAQHYLMRANITAIR 301
Query: 318 XXXXXNMERLVLACGGEAVNSVDDLTPGCLGW-AGLVYEHVLGEEKYTFVENVKNPHSCT 376
+ R+ ACG V+ ++L +G AGL+ +G+E +TF+ K+P +CT
Sbjct: 302 RVRKTDNNRIARACGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACT 361
Query: 377 ILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGR 436
IL++G + +++++ ++D ++ +N + D +V G GA E+A L E K + G
Sbjct: 362 ILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHAL-TEKSKAMTGV 420
Query: 437 AQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGN--IVGLNQHSGDPIDPQM 494
Q A A AL V+P+TL +N G T ++ +L+ +H + N G+N +G +D +
Sbjct: 421 EQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKE 480
Query: 495 EGIFDNYSVKRQIINSGPVIASQLLLVDEVI 525
GI++ +VK Q + A LL +D+++
Sbjct: 481 LGIWEPLAVKLQTYKTAVETAVLLLRIDDIV 511
>pdb|3IYG|E Chain E, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 515
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 261/518 (50%), Gaps = 20/518 (3%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
AL +I AAK + + +KT+LGP G KM+V GD+ +T DG T+L M + + A ++
Sbjct: 11 ALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMV 70
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFK 137
+ +QDD GDGTT V+ G L++++E+ +D G+HP + DG+E A R ++ L+K
Sbjct: 71 ELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKIS 130
Query: 138 TPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEA-IDLFMVEL 196
V++ D + E L A+TTL +K+ S Q+ +I VNAVL + + +D ++++
Sbjct: 131 DSVLV-DMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKV 189
Query: 197 MHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNA 256
DT+L++G+++D HP M ++ E+ I E K + ++
Sbjct: 190 EGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSV 249
Query: 257 EQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXX 316
E +A+ E+ + +E +R+I E +G + + + Q G D +
Sbjct: 250 EDFKALQKYEKEKFEEMIRQIKE------TGAN---LAVCQWGFDDEANHLLLQNDLPAV 300
Query: 317 XXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLG--EEKYTFVENVKNPHS 374
+E + +A GG V +LT LG+AGLV E G ++K +E KN +
Sbjct: 301 RWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRA 360
Query: 375 CTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKK--T 432
TI I+G N I + K ++ D L ++N I D VV G GA E++ + E K T
Sbjct: 361 VTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPT 420
Query: 433 VEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR--GNIVGLNQHSGDPI 490
+E Q + AFADAL V+P LAEN+G++ + ++ + +G++
Sbjct: 421 LE---QYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTN 477
Query: 491 DPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 528
D + + + + K+Q I+ + +L +D++ + G
Sbjct: 478 DMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKPG 515
>pdb|3P9D|B Chain B, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|J Chain J, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|BB Chain b, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|JJ Chain j, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|B Chain B, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|J Chain J, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|BB Chain b, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|JJ Chain j, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 527
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 257/507 (50%), Gaps = 30/507 (5%)
Query: 31 DVLKTNLGPKGTIKMLVGGAGDI-KLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGD 89
D++K+ LGPKG K+L + + +T DG T+LK + + NP A ++ + QDD GD
Sbjct: 31 DLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGD 90
Query: 90 GTTSTVIFIGELMKQSERCIDEG-MHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDK 148
GTTS + EL++++E+ ID+ +HP+ +++G+ R T + + DK
Sbjct: 91 GTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGY----RLASAAALDALTKAAVDNSHDK 146
Query: 149 EILK----MVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFD 204
+ + +A+TTL +K+ D ++ NA+L ++ + +L ++++ +
Sbjct: 147 TMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKG---STNLEHIQIIKILGGKL 203
Query: 205 VDTRLVEGLVL--DHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAM 262
D+ L EG +L G+ P +R EN IL N +L+ +K ++ F ++ + A
Sbjct: 204 SDSFLDEGFILAKKFGNNQP---KRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQ 260
Query: 263 V-AAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXXXXXX 321
+ AER ++ K+ +I + N F IN++ I
Sbjct: 261 LEKAEREKMKNKIAKISKF-------GINTF--INRQLIYDYPEQLFTDLGINSIEHADF 311
Query: 322 XNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKG 381
+ERL L GGE V++ D+ + LG ++ E +LGE+ + K +CTI+++G
Sbjct: 312 EGVERLALVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRG 371
Query: 382 PNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGV 441
D T+ + + ++ D L + T ++ VLG G E+ + + E + ++G+ L V
Sbjct: 372 ATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEA-QNIDGKKSLAV 430
Query: 442 EAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRG-NIVGLNQHSGDPIDPQMEGIFDN 500
EAFA AL +P LA+NAG D+ +++ L+ G + GL+ ++G D + GI ++
Sbjct: 431 EAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVES 490
Query: 501 YSVKRQIINSGPVIASQLLLVDEVIRA 527
Y +KR +++S A LL VD +IRA
Sbjct: 491 YKLKRAVVSSASEAAEVLLRVDNIIRA 517
>pdb|3IYG|A Chain A, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 529
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/526 (25%), Positives = 263/526 (50%), Gaps = 35/526 (6%)
Query: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
N+ AA + +++K++LGP G KMLV GD+ +T DG T+LK +++++P A ++ A
Sbjct: 15 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAD 74
Query: 82 AQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 141
QD GDGTTS VI EL+K ++ + + +HP ++ G+ +A + ++++ + ++
Sbjct: 75 LQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIS--ENLII 132
Query: 142 MGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIR------KPEEAIDLFMVE 195
DE ++ L A+T++ +K+ D ++VV+AVL I+ +P ++ V
Sbjct: 133 NTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVL 192
Query: 196 LMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSN 255
H R + ++ L+ G L+ M +R N I + SL+ K ++ ++
Sbjct: 193 KAHGRSQM--ESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITD 250
Query: 256 AEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXX 315
E+ + + E E++++I+ +G + V++ GID +
Sbjct: 251 PEKLDQIRQRESDITKERIQKIL------ATGAN---VILTTGGIDDMCLKYFVEAGAMA 301
Query: 316 XXXXXXXNMERLVLACGGEAVNSVDDL------TPGCLGWAGLVYEHVLGEEKYTFVENV 369
+++R+ A G ++++ +L LG A V + + +++ ++N
Sbjct: 302 VRRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNT 361
Query: 370 KNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEV 429
K S +++++G ND +++ ++ D L VK +E ++VV G GA E A YL N
Sbjct: 362 KARTSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLEN-Y 420
Query: 430 KKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNI---------V 480
++ R QL + FA +LLV+P TLA NA D+ D++ L+ H+ + +
Sbjct: 421 ATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWI 480
Query: 481 GLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIR 526
GL+ +G P D + G+F+ VK + + A +L +D++I+
Sbjct: 481 GLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 526
>pdb|3P9D|G Chain G, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|O Chain O, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|GG Chain g, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|OO Chain o, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|G Chain G, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|O Chain O, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|GG Chain g, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|OO Chain o, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 550
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 255/511 (49%), Gaps = 22/511 (4%)
Query: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
NINA +Q+ LK LGP G+ ++V ++ DG T+LK + + +P A + +
Sbjct: 29 NINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVDISR 88
Query: 82 AQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 141
AQD GDGTTS I GELMK+++ ++EG+ +++ G+ A ++ + + +
Sbjct: 89 AQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDIT 148
Query: 142 MGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRH 201
+E+L+ ART + +KL + AD + V+AVL + + + +D ++ + +
Sbjct: 149 SEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRND--LDDKLIGIKKIPG 206
Query: 202 KFDVDTRLVEGLVLDHGSRHPDMK---RRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQ 258
++ + G+ + + ++ N IL+ NV LE + + NA + E
Sbjct: 207 GAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVED 266
Query: 259 REAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXXX 318
+A+V AE + + EK+R++ E +G + +V+++ I L+
Sbjct: 267 YQAIVDAEWQLIFEKLRQVEE------TGAN---IVLSKLPIGDLATQFFADRNIFCAGR 317
Query: 319 XXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTIL 378
+M R++ A GG ++ D+ P LG L E +G E+Y + +CT+L
Sbjct: 318 VSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLL 377
Query: 379 IKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQ 438
++G + IA+++ ++ D + VK ++++ +V G GA E+ + L + KT+ G+ Q
Sbjct: 378 LRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCL-RDYSKTIAGKQQ 436
Query: 439 LGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRG----NIVGLNQHSGDPIDPQM 494
+ + AFA AL V+P+ L ENAG D +++ L+ H +G +V ++ GD
Sbjct: 437 MIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNF---A 493
Query: 495 EGIFDNYSVKRQIINSGPVIASQLLLVDEVI 525
+ +++ VK +NS + +L VDE I
Sbjct: 494 KFVWEPALVKINALNSATEATNLILSVDETI 524
>pdb|3IYG|H Chain H, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 515
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 258/513 (50%), Gaps = 18/513 (3%)
Query: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
NI+A + + + ++T LGP+G K++V G G ++ DG T+LK + + +P A + A
Sbjct: 16 NISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAK 75
Query: 82 AQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 141
+QD GDGTTS + E +KQ + ++EG+HP++++ F A + + +++ V
Sbjct: 76 SQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVK 135
Query: 142 MGDEPD-KEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMR 200
D+ + +++L+ A T L +KL +VV+AV+ + ++ + L M+ + ++
Sbjct: 136 KEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMML---DDLLQLKMIGIKKVQ 192
Query: 201 HKFDVDTRLVEGLVLDHGSRHPDMK---RRAENCYILTCNVSLEYEKSEVNAGFFYSNAE 257
+++LV G+ + + ++ N I NV LE + + NA E
Sbjct: 193 GGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAEKDNAEIRVHTVE 252
Query: 258 QREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXX 317
+A+V AE + +K+ +I K VV+++ I ++
Sbjct: 253 DYQAIVDAEWNILYDKLEKIHHSGAK---------VVLSKLPIGDVATQYFADRDMFCAG 303
Query: 318 XXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTI 377
+++R ++ACGG SV+ L+ LG + E +G E+Y F +CTI
Sbjct: 304 RVPEEDLKRTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTI 363
Query: 378 LIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRA 437
+++G + + + + ++ D + V+ I++++VV G GA E+ +YL + +T+ G+
Sbjct: 364 ILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL-RDYSRTIPGKQ 422
Query: 438 QLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNI-VGLNQHSGDPIDPQMEG 496
QL + A+A AL ++P+ L +NAG D +++ L+ H +G + G++ ++ D D
Sbjct: 423 QLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAF 482
Query: 497 IFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 529
+++ V+ + + A ++ VDE I+ R
Sbjct: 483 VWEPAMVRINALTAASEAACLIVSVDETIKNPR 515
>pdb|3IYG|D Chain D, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 518
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 234/478 (48%), Gaps = 28/478 (5%)
Query: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
NI+AAK + D ++T+LGPKG KM+ G GD+ +T DG T+LK+MQ+ +P A M+ +
Sbjct: 16 NISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSK 75
Query: 82 AQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 141
AQD +GDGTTS VI G L+ + + +G+HP ++ + F+ A ++ L PV
Sbjct: 76 AQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVE 135
Query: 142 MGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEA--IDLFMVELMHM 199
+ D+E L A T+L +K+ + L+ + V+AV+ + P A +DL ++++
Sbjct: 136 LS---DRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKK 192
Query: 200 RHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQR 259
D LVEGLVL + + R E I L K++++ S+ Q
Sbjct: 193 LGGTIDDCELVEGLVLTQKVANSGIT-RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQM 251
Query: 260 EAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGI--DPLSXXXXXXXXXXXXX 317
+ ++ ER + V++I K C+ V++ QK I D LS
Sbjct: 252 DRVLREERAYILNLVKQI---KKTGCN------VLLIQKSILRDALSDLALHFLNKMKIM 302
Query: 318 XXXXXNMERLVLAC---GGEAVNSVDDLTPGCLGWAGLVYEHVL-GEEKYTFVENVKNP- 372
E + C G + V VD T LG A L E L G K + +P
Sbjct: 303 VVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPG 362
Query: 373 HSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGA--FEVAARQYLVNEVK 430
+ TI+++G N I + + ++ D L ++ ++ A++ G GA E+A R + E
Sbjct: 363 KTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALR---LTEYS 419
Query: 431 KTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRG-NIVGLNQHSG 487
+T+ G + AFADA+ V+P TLAENAGL+ + L+ H +G G+N G
Sbjct: 420 RTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKG 477
>pdb|3P9D|A Chain A, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|I Chain I, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|AA Chain a, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|II Chain i, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|A Chain A, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|I Chain I, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|AA Chain a, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|II Chain i, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 559
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 229/467 (49%), Gaps = 24/467 (5%)
Query: 20 HMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIART 79
+ N+ A + +V+K++LGP G KMLV GD +T DG T+L + +Q+P ++
Sbjct: 27 NQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVEL 86
Query: 80 AVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
A QD GDGTTS VI EL+K++ + +HP ++ GF +A R ++F+ + +
Sbjct: 87 AQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLST 146
Query: 140 VVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIR----KPEEAIDLFMVE 195
V D KE L +A+T++ +K+ + +D +++VV+A+L ++ K E + V
Sbjct: 147 SV--DTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVN 204
Query: 196 LMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRR--AENCYILTCNVSLEYEKSEVNAGFFY 253
++ K ++ LV G L+ M +R N I +++L+ + +
Sbjct: 205 VLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKARMAMGVQINI 264
Query: 254 SNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXX 313
+ EQ E + E V E+V++II+ + VV+ KGID L
Sbjct: 265 DDPEQLEQIRKREAGIVLERVKKIIDAGAQ---------VVLTTKGIDDLCLKEFVEAKI 315
Query: 314 XXXXXXXXXNMERLVLACGGEAVNSVDDL------TPGCLGWAGLVYEHVLGEEKYTFVE 367
++ R+ A G V+S+ +L LG V + +++ ++
Sbjct: 316 MGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIK 375
Query: 368 NVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVN 427
S +I+++G ND+++ +++ ++ D L VK T+E VV G G E A YL N
Sbjct: 376 GTSKHSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDN 435
Query: 428 EVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH 474
TV R QL + FA ALL++PKTLA NA D+ +++ L+ H
Sbjct: 436 -FATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYH 481
>pdb|3IYG|B Chain B, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
pdb|3KTT|B Chain B, Atomic Model Of Bovine Tric Cct2(Beta) Subunit Derived
From A 4.0 Angstrom Cryo-Em Map
pdb|4A0O|A Chain A, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|B Chain B, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|C Chain C, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|D Chain D, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|E Chain E, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|F Chain F, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|G Chain G, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|H Chain H, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|I Chain I, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|J Chain J, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|K Chain K, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|L Chain L, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|M Chain M, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|N Chain N, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|O Chain O, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|P Chain P, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0V|A Chain A, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|B Chain B, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|C Chain C, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|D Chain D, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|E Chain E, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|F Chain F, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|G Chain G, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|H Chain H, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|I Chain I, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|J Chain J, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|K Chain K, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|L Chain L, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|M Chain M, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|N Chain N, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|O Chain O, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|P Chain P, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0W|A Chain A, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|B Chain B, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|C Chain C, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|D Chain D, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|E Chain E, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|F Chain F, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|G Chain G, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|H Chain H, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|I Chain I, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|J Chain J, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|K Chain K, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|L Chain L, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|M Chain M, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|N Chain N, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|O Chain O, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|P Chain P, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A13|A Chain A, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|B Chain B, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|C Chain C, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|D Chain D, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|E Chain E, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|F Chain F, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|G Chain G, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|H Chain H, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|I Chain I, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|J Chain J, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|K Chain K, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|L Chain L, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|M Chain M, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|N Chain N, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|O Chain O, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|P Chain P, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
Length = 513
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 151/513 (29%), Positives = 251/513 (48%), Gaps = 32/513 (6%)
Query: 26 AKGLQDVLKTNLGPKGTIKMLVGGAGDIKL--TKDGNTLLKEMQIQNPTAIMIARTAVAQ 83
A + D++K+ LGPKG K+L+ D L T DG T+LK + + NP A ++ + Q
Sbjct: 19 AIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQ 78
Query: 84 DDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMG 143
DD GDGTTS + EL++++E I + +HP+ ++ G+ A +A Q L + V G
Sbjct: 79 DDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQAL--LNSAVDHG 136
Query: 144 DEPDK--EILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRH 201
+ K + L +A TTL +KL D T + V AVL ++ +E +H+
Sbjct: 137 SDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGN------LEAIHVIK 190
Query: 202 KFD---VDTRLVEGLVLDH--GSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNA 256
K D+ L EG +LD G P +R EN IL N ++ +K ++ ++
Sbjct: 191 KLGGSLADSYLDEGFLLDKKIGVNQP---KRIENAKILIANTGMDTDKIKIFGSRVRVDS 247
Query: 257 EQREAMVA-AERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXX 315
+ A + AE+ ++ EKV RI LK+ + N F IN++ I
Sbjct: 248 TAKVAEIEHAEKEKMKEKVERI--LKHGI-----NCF--INRQLIYNYPEQLFGAAGVMA 298
Query: 316 XXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSC 375
+ERL L GGE ++ D LG L+ E ++GE+K V +C
Sbjct: 299 IEHADFVGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEAC 358
Query: 376 TILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEG 435
TI+++G + + + ++ D L + T++D V G G E+ + V ++ G
Sbjct: 359 TIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEM-LMAHAVTQLASRTPG 417
Query: 436 RAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRG-NIVGLNQHSGDPIDPQM 494
+ + +E++A AL ++P +A+NAG D+ D++ L+ H G GL+ G D +
Sbjct: 418 KEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSV 477
Query: 495 EGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
GI +++ VKRQ++ S A +L VD +I+A
Sbjct: 478 LGITESFQVKRQVLLSAAEAAEVILRVDNIIKA 510
>pdb|3P9D|E Chain E, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|M Chain M, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|EE Chain e, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|MM Chain m, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|E Chain E, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|M Chain M, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|EE Chain e, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|MM Chain m, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 562
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 245/523 (46%), Gaps = 26/523 (4%)
Query: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
+I AA+ + ++KT+LGP+G K+L+ G+I +T DG T+L +M++ N A ++ + +
Sbjct: 50 HILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSK 109
Query: 82 AQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGF-EIAKRATLQFLEKFKTPV 140
+QDD GDGTT V+ L+ Q+ I +G+HP + +GF E AK A + E
Sbjct: 110 SQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDIS 169
Query: 141 VMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVL-CIRKPEEAIDLFMVELMHM 199
DE ++ L A+T+L +K+ D+ ++ V AV+ + K + +D ++++
Sbjct: 170 ASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGR 229
Query: 200 RHKFDVDTRLVEGLVLDHGSRHPDMKR--------RAENCYILTCNVSLEYEKSEVNAGF 251
D++L+ G++LD HP M + ILTC E K +
Sbjct: 230 VGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTC--PFEPPKPKTKHKL 287
Query: 252 FYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXX 311
S+ E+ + + E+ +K + +I+ K +G D VVI Q G D +
Sbjct: 288 DISSVEEYQKLQTYEQ----DKFKEMIDDVKK--AGAD---VVICQWGFDDEANHLLLQN 338
Query: 312 XXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLG--EEKYTFVENV 369
+E + ++ G V DL+ LG +YE G +++ +E
Sbjct: 339 DLPAVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQS 398
Query: 370 KNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEV 429
K + T ++G N + + + A+ D L V+N ++D VV G GA EV + E
Sbjct: 399 KETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEA 458
Query: 430 KKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNI--VGLNQHSG 487
K G Q FA AL +P TLAEN+GLD + LK + + I +G++
Sbjct: 459 DKQ-RGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGY 517
Query: 488 DPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRN 530
D + + D + K+Q I + +L +D VI +G++
Sbjct: 518 GSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560
>pdb|3P9D|C Chain C, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|K Chain K, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|CC Chain c, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|KK Chain k, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|C Chain C, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|K Chain K, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|CC Chain c, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|KK Chain k, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 590
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/593 (23%), Positives = 264/593 (44%), Gaps = 82/593 (13%)
Query: 6 LNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKE 65
+N + E A NI AAK + DV++T LGPK +KML+ G + LT DG+ +L+E
Sbjct: 8 MNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILRE 67
Query: 66 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQ-SERCIDEGMHPRVLVDGFEI 124
+ + +P A + + QD+ GDGTT+ +I GE++ Q + I++ +HP +++ +
Sbjct: 68 IDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKK 127
Query: 125 AKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRK 184
A L+ +++ PV D + +K + + ++ TK ++++ ++ ++AV +RK
Sbjct: 128 ALTDALEVIKQVSKPV---DVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRK 184
Query: 185 ---------PEEAIDLFMVELMHMRHKFDV-DTRLVEGLVLDHGSRHPDMKRRAENCYIL 234
P ID+ + DV D+R+++G++L+ HP M R EN ++
Sbjct: 185 DLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRVV 244
Query: 235 TCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVV 294
+ LEY+K E E ++ E QV +I+ ++ + V
Sbjct: 245 LLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTL---------V 295
Query: 295 INQKGIDPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLT----------- 343
I +KG+ L+ + R+ G VN V+DL
Sbjct: 296 ITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLF 355
Query: 344 ------------------PGC-LGWAGLVYEHVLGEEKY--TFV---------------- 366
PG GW+ +E G+ ++ F+
Sbjct: 356 KVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGA 415
Query: 367 ---------ENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAF 417
+ + +CTI+++G + + +I ++D + +N + ++ G GA
Sbjct: 416 LGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGAT 475
Query: 418 EVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRG 477
E+A L + K+ +EG Q +A ADA+ +P+TL +NAG D ++ L+ +H +G
Sbjct: 476 EMAVSVKLAEKAKQ-LEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQG 534
Query: 478 NI-VGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 529
N G++ G +D GI++ +K+Q + + A LL VD+++ R
Sbjct: 535 NFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVR 587
>pdb|3P9D|D Chain D, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|L Chain L, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|DD Chain d, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|LL Chain l, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|D Chain D, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|L Chain L, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|DD Chain d, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|LL Chain l, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 528
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 242/516 (46%), Gaps = 32/516 (6%)
Query: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
NI AA+ + D ++T+LGPKG KM+ G+I ++ DG+T+LK+M I +P A M+ +
Sbjct: 24 NIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSA 83
Query: 82 AQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 141
AQD +GDGTTS VI G L+ +ER +++G+HP ++ D F+ A + ++ L + V
Sbjct: 84 AQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVS 143
Query: 142 MGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIR-KPEEAIDLFMVELMHMR 200
+ D+E L A T+L +K+ + L + V++VL I + + +DL + L+
Sbjct: 144 LS---DREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKV 200
Query: 201 HKFDVDTRLVEGLVLDHGS-RHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQR 259
DT +++G+VL + + R E I + K + ++ Q
Sbjct: 201 GGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQM 260
Query: 260 EAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGI-----DPLSXXXXXXXXXX 314
+ ++ ER + L V++ QK I + L+
Sbjct: 261 DKILKEERAYL---------LNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIM 311
Query: 315 XXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPH- 373
+E L G + + ++ T L A LV E K V ++N +
Sbjct: 312 VVKDIEREEIEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNA 371
Query: 374 --SCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKK 431
+ +++I+G N+ I + + ++ D L ++ +++ ++ G GA E+ + L E +
Sbjct: 372 RPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEA-R 430
Query: 432 TVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPID 491
++EG + FA AL V+P TLAENAGL++ V+ L+ +H+ G + D I
Sbjct: 431 SMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGEL-------NDGIS 483
Query: 492 PQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
+ G + Y + I+ V S + L E +++
Sbjct: 484 VRRSGTTNTY--EEHILQPVLVSTSAITLASECVKS 517
>pdb|3P9D|H Chain H, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|P Chain P, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|HH Chain h, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|PP Chain p, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|H Chain H, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|P Chain P, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|HH Chain h, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|PP Chain p, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 568
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 150/573 (26%), Positives = 265/573 (46%), Gaps = 68/573 (11%)
Query: 1 MSLRV-LNPNAEVLNKSAALHMN--------INAAKGLQDVLKTNLGPKGTIKMLVGGAG 51
MSLR+ NPNA + + + N I A + L + T++GP G K++V G
Sbjct: 1 MSLRLPQNPNAGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLG 60
Query: 52 DIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDIS-GDGTTSTVIFIGELMKQSERCID 110
I +T D T+L+E+ I +P A+ + A Q I GDGT +I GEL+ SE+ I
Sbjct: 61 KIIITNDAATMLRELDIVHP-AVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLIS 119
Query: 111 EGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDK----EILKMVARTTLRTKLY-- 164
G+ ++ G+ +A++ TL+ L++ V+G+ DK E+LKM+ + + +K Y
Sbjct: 120 MGLSAVEIIQGYNMARKFTLKELDEM----VVGEITDKNDKNELLKMI-KPVISSKKYGS 174
Query: 165 ESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFD---VDTRLVEGLVLDHGSRH 221
E + +L V+ VL + + I F V+ + + ++ +++G+V + R
Sbjct: 175 EDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFN---RE 231
Query: 222 PD--MKRRAEN----CYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVR 275
P+ +K +E+ + TC L+ +E NA++ E +Q+D ++
Sbjct: 232 PEGHVKSLSEDKKHKVAVFTC--PLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMK 289
Query: 276 RIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEA 335
I ++ + C ++ G+ L+ + RL CG
Sbjct: 290 EIADMGVE-C--------IVAGAGVGELALHYLNRYGILVLKVPSKFELRRLCRVCGATP 340
Query: 336 VNSVDDLTPGCLGWAGLVYEHVLGEEKYTFV--ENVKNPHSCTILIKGPNDHTIAQIKDA 393
+ + TP LG V +G ++ T E + + TI+++G + + I+ A
Sbjct: 341 LPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERA 400
Query: 394 VRDGLRAVKNTIEDEA--VVLGAGAFEVAARQYLVNEVKKTVE---GRAQLGVEAFADAL 448
+ DG+ AVK ++ ++ GAGA E+ L++ + K E G QL ++ FA A
Sbjct: 401 IDDGVAAVKGLMKPSGGKLLPGAGATEIE----LISRITKYGERTPGLLQLAIKQFAVAF 456
Query: 449 LVVPKTLAENAGLDTQDVIIALKGEH---DRGNIVGLNQHSGDPIDPQM---------EG 496
VVP+TLAE AGLD +V+ L H + G + + + G ID + E
Sbjct: 457 EVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREEN 516
Query: 497 IFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 529
I+D + K+ IN A+ +L +D++I A +
Sbjct: 517 IYDMLATKKFAINVATEAATTVLSIDQIIMAKK 549
>pdb|3IYG|Q Chain Q, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 512
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 7/210 (3%)
Query: 323 NMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHS-CTILIKG 381
++ RL G A+ ++ +G VY +G+ + ++ K + TI+++G
Sbjct: 304 DLRRLCKTVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRG 363
Query: 382 PNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVA-ARQYLVNEVKKTVEGRAQLG 440
D+ + I+ AV DG+ K D+ +V G GA E+ A+Q + +T G Q
Sbjct: 364 STDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQ--ITSYGETCPGLEQYA 421
Query: 441 VEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNI-VGLNQHSGDPIDPQM--EGI 497
++ FA+A +P+ LAEN+G+ +VI L H GN VGL+ + P M G+
Sbjct: 422 IKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGV 481
Query: 498 FDNYSVKRQIINSGPVIASQLLLVDEVIRA 527
D Y K I A +L VD++I A
Sbjct: 482 LDTYLGKYWAIKLATNAAVTVLRVDQIIMA 511
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 65/116 (56%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A++ NI A K L +T GP G KM++ + +T D T+L+E+++Q+P A MI
Sbjct: 12 AVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIV 71
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFL 133
+ Q+ GDGT ++F G L++ +E + G+ +++G+EIA + + L
Sbjct: 72 MASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEIL 127
>pdb|1GML|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GML|B Chain B, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GML|C Chain C, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GML|D Chain D, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GN1|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|B Chain B, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|C Chain C, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|D Chain D, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|E Chain E, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|F Chain F, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|G Chain G, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|H Chain H, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
Length = 178
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 206 DTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAA 265
D+ ++ G++++ HP M+R +N I+ + SLEY+K E + E ++
Sbjct: 3 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQM 62
Query: 266 ERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXXXXXXXNME 325
E + + II+LK V VI +KGI L+ +
Sbjct: 63 EEEYIHQLCEDIIQLKPDV---------VITEKGISDLAQHYLMRANVTAIRRVRKTDNN 113
Query: 326 RLVLACGGEAVNSVDDLTPGCLGW-AGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPN 383
R+ ACG V+ ++L +G AGL+ +G+E +TF+ + K+P +CTIL++G +
Sbjct: 114 RIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGAS 172
>pdb|1ASS|A Chain A, Apical Domain Of The Chaperonin From Thermoplasma
Acidophilum
pdb|1ASX|A Chain A, Apical Domain Of The Chaperonin From Thermoplasma
Acidophilum
Length = 159
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 212 GLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAER---R 268
G+V+D H M +N I + +LE +K+E+ A S+ + + + E +
Sbjct: 3 GIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFK 62
Query: 269 QVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXXXXXXXNMERLV 328
Q+ EK+++ SG + VV+ QKGID ++ +ME+L
Sbjct: 63 QMVEKIKK---------SGAN---VVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLA 110
Query: 329 LACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKN 371
A G + V +DDLTP LG A V E +G+++ TFV KN
Sbjct: 111 KATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN 153
>pdb|1E0R|B Chain B, Beta-Apical Domain Of Thermosome
Length = 159
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Query: 212 GLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVD 271
G+++D HP M ++ I + LE +K E + + + +A E +
Sbjct: 3 GIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLR 62
Query: 272 EKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXXXXXXXNMERLVLAC 331
E V +I K N VVI QKGID ++ +M++L A
Sbjct: 63 EMVDKI-----KSVGAN----VVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKAT 113
Query: 332 GGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKN 371
G V+++D+++ LG A V + +GE+ TFV KN
Sbjct: 114 GASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGSKN 153
>pdb|1WE3|A Chain A, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|B Chain B, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|C Chain C, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|D Chain D, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|E Chain E, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|F Chain F, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|G Chain G, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|H Chain H, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|I Chain I, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|J Chain J, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|K Chain K, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|L Chain L, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|M Chain M, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|N Chain N, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|AA Chain a, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|BB Chain b, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|CC Chain c, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|DD Chain d, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|EE Chain e, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|FF Chain f, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|GG Chain g, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|HH Chain h, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|II Chain i, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|JJ Chain j, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|KK Chain k, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|LL Chain l, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|MM Chain m, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|NN Chain n, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
Length = 543
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTA 73
AL +NA + + +K LGP+G +L G +TKDG T+ KE++++ N A
Sbjct: 14 ALERGVNA---VANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGA 70
Query: 74 IMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFL 133
++ A +D++GDGTT+ + ++++ + + G +P L G E A A ++ +
Sbjct: 71 QLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKI 130
Query: 134 EKFKTPVVMGDEPDKEILKMVARTTLR-TKLYESLADQLTDIVVNAVLCIRKPEEAIDLF 192
+ PV D++ ++ VA + ++ + +AD + + ++ + EE+ L
Sbjct: 131 KALAIPV-----EDRKAIEEVATISANDPEVGKLIADAMEKVGKEGIITV---EESKSL- 181
Query: 193 MVELMHMRHKFDVDTRLVEGLVLDHGSRHP-------DMKRRAENCYIL 234
+ + + VEG D G P M+ E+ +IL
Sbjct: 182 -----------ETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFIL 219
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 375 CTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVE 434
I + + + + K D L A + +E E +V G G + A V E+ K +E
Sbjct: 375 AVIRVGAATETELKEKKHRFEDALNATRAAVE-EGIVPGGGVTLLRAISA-VEELIKKLE 432
Query: 435 GRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQM 494
G G + AL + +AENAG + ++ + E + G N +G+ +D
Sbjct: 433 GDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAET-KNPRYGFNAATGEFVDMVE 491
Query: 495 EGIFDNYSVKRQIINSGPVIASQLLLVDEVI 525
GI D V R + + I + +L + V+
Sbjct: 492 AGIVDPAKVTRSALQNAASIGALILTTEAVV 522
>pdb|1IOK|A Chain A, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|B Chain B, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|C Chain C, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|D Chain D, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|E Chain E, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|F Chain F, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|G Chain G, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
Length = 545
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQI----QNPTAIMIARTAVAQD 84
L D +K LGPKG ++ G ++TKDG ++ KE+++ +N A M+ A +
Sbjct: 23 LADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTN 82
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPV 140
D +GDGTT+ + ++++ + + GM+P L G ++A ++ ++ PV
Sbjct: 83 DEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPV 138
>pdb|3RTK|A Chain A, Crystal Structure Of Cpn60.2 From Mycobacterium
Tuberculosis At 2.8a
pdb|3RTK|B Chain B, Crystal Structure Of Cpn60.2 From Mycobacterium
Tuberculosis At 2.8a
Length = 546
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 19 LHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPT----AI 74
L +NA L D +K LGPKG +L G +T DG ++ KE+++++P A
Sbjct: 15 LERGLNA---LADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAE 71
Query: 75 MIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 125
++ A DD++GDGTT+ + L+++ R + G +P L G E A
Sbjct: 72 LVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKA 122
>pdb|1AON|A Chain A, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|B Chain B, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|C Chain C, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|D Chain D, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|E Chain E, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|F Chain F, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|G Chain G, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|H Chain H, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|I Chain I, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|J Chain J, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|K Chain K, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|L Chain L, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|M Chain M, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|N Chain N, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1GRU|A Chain A, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|B Chain B, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|C Chain C, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|D Chain D, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|E Chain E, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|F Chain F, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|G Chain G, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|H Chain H, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|I Chain I, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|J Chain J, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|K Chain K, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|L Chain L, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|M Chain M, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|N Chain N, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1MNF|A Chain A, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|B Chain B, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|C Chain C, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|D Chain D, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|E Chain E, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|F Chain F, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|G Chain G, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|H Chain H, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|I Chain I, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|J Chain J, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|K Chain K, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|L Chain L, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|M Chain M, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|N Chain N, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1XCK|A Chain A, Crystal Structure Of Apo Groel
pdb|1XCK|B Chain B, Crystal Structure Of Apo Groel
pdb|1XCK|C Chain C, Crystal Structure Of Apo Groel
pdb|1XCK|D Chain D, Crystal Structure Of Apo Groel
pdb|1XCK|E Chain E, Crystal Structure Of Apo Groel
pdb|1XCK|F Chain F, Crystal Structure Of Apo Groel
pdb|1XCK|G Chain G, Crystal Structure Of Apo Groel
pdb|1XCK|H Chain H, Crystal Structure Of Apo Groel
pdb|1XCK|I Chain I, Crystal Structure Of Apo Groel
pdb|1XCK|J Chain J, Crystal Structure Of Apo Groel
pdb|1XCK|K Chain K, Crystal Structure Of Apo Groel
pdb|1XCK|L Chain L, Crystal Structure Of Apo Groel
pdb|1XCK|M Chain M, Crystal Structure Of Apo Groel
pdb|1XCK|N Chain N, Crystal Structure Of Apo Groel
pdb|2C7C|A Chain A, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|B Chain B, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|C Chain C, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|D Chain D, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|E Chain E, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|F Chain F, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|G Chain G, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|H Chain H, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|I Chain I, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|J Chain J, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|K Chain K, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|L Chain L, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|M Chain M, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|N Chain N, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7D|A Chain A, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|B Chain B, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|C Chain C, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|D Chain D, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|E Chain E, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|F Chain F, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|G Chain G, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|H Chain H, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|I Chain I, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|J Chain J, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|K Chain K, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|L Chain L, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|M Chain M, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|N Chain N, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2CGT|A Chain A, Groel-Adp-Gp31 Complex
pdb|2CGT|B Chain B, Groel-Adp-Gp31 Complex
pdb|2CGT|C Chain C, Groel-Adp-Gp31 Complex
pdb|2CGT|D Chain D, Groel-Adp-Gp31 Complex
pdb|2CGT|E Chain E, Groel-Adp-Gp31 Complex
pdb|2CGT|F Chain F, Groel-Adp-Gp31 Complex
pdb|2CGT|G Chain G, Groel-Adp-Gp31 Complex
pdb|2CGT|H Chain H, Groel-Adp-Gp31 Complex
pdb|2CGT|I Chain I, Groel-Adp-Gp31 Complex
pdb|2CGT|J Chain J, Groel-Adp-Gp31 Complex
pdb|2CGT|K Chain K, Groel-Adp-Gp31 Complex
pdb|2CGT|L Chain L, Groel-Adp-Gp31 Complex
pdb|2CGT|M Chain M, Groel-Adp-Gp31 Complex
pdb|2CGT|N Chain N, Groel-Adp-Gp31 Complex
pdb|2NWC|A Chain A, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|B Chain B, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|C Chain C, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|D Chain D, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|E Chain E, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|F Chain F, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|G Chain G, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|H Chain H, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|I Chain I, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|J Chain J, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|K Chain K, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|L Chain L, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|M Chain M, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|N Chain N, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|3E76|A Chain A, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|B Chain B, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|C Chain C, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|D Chain D, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|E Chain E, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|F Chain F, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|G Chain G, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|H Chain H, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|I Chain I, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|J Chain J, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|K Chain K, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|L Chain L, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|M Chain M, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|N Chain N, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
Length = 547
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 22 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A A ++ L+ P
Sbjct: 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVP 136
>pdb|4AAQ|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
Length = 548
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 23 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 82
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A A ++ L+ P
Sbjct: 83 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVP 137
>pdb|1J4Z|A Chain A, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|B Chain B, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|C Chain C, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|D Chain D, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|E Chain E, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|F Chain F, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|G Chain G, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|H Chain H, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|I Chain I, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|J Chain J, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|K Chain K, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|L Chain L, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|M Chain M, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|N Chain N, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|O Chain O, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|P Chain P, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Q Chain Q, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|R Chain R, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|S Chain S, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|T Chain T, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|U Chain U, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|V Chain V, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|W Chain W, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|X Chain X, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Y Chain Y, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Z Chain Z, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|1 Chain 1, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|2 Chain 2, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
Length = 547
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 22 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A A ++ L+ P
Sbjct: 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVP 136
>pdb|3C9V|A Chain A, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|B Chain B, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|C Chain C, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|D Chain D, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|E Chain E, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|F Chain F, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|G Chain G, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|H Chain H, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|I Chain I, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|J Chain J, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|K Chain K, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|L Chain L, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|M Chain M, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|N Chain N, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
Length = 526
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 22 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A A ++ L+ P
Sbjct: 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVP 136
>pdb|2EU1|A Chain A, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|B Chain B, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|C Chain C, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|D Chain D, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|E Chain E, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|F Chain F, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|G Chain G, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|H Chain H, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|I Chain I, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|J Chain J, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|K Chain K, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|L Chain L, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|M Chain M, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|N Chain N, Crystal Structure Of The Chaperonin Groel-E461k
Length = 548
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 23 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 82
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A A ++ L+ P
Sbjct: 83 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVP 137
>pdb|1PCQ|A Chain A, Crystal Structure Of Groel-Groes
pdb|1PCQ|B Chain B, Crystal Structure Of Groel-Groes
pdb|1PCQ|C Chain C, Crystal Structure Of Groel-Groes
pdb|1PCQ|D Chain D, Crystal Structure Of Groel-Groes
pdb|1PCQ|E Chain E, Crystal Structure Of Groel-Groes
pdb|1PCQ|F Chain F, Crystal Structure Of Groel-Groes
pdb|1PCQ|G Chain G, Crystal Structure Of Groel-Groes
pdb|1PCQ|H Chain H, Crystal Structure Of Groel-Groes
pdb|1PCQ|I Chain I, Crystal Structure Of Groel-Groes
pdb|1PCQ|J Chain J, Crystal Structure Of Groel-Groes
pdb|1PCQ|K Chain K, Crystal Structure Of Groel-Groes
pdb|1PCQ|L Chain L, Crystal Structure Of Groel-Groes
pdb|1PCQ|M Chain M, Crystal Structure Of Groel-Groes
pdb|1PCQ|N Chain N, Crystal Structure Of Groel-Groes
pdb|1PF9|A Chain A, Groel-Groes-Adp
pdb|1PF9|B Chain B, Groel-Groes-Adp
pdb|1PF9|C Chain C, Groel-Groes-Adp
pdb|1PF9|D Chain D, Groel-Groes-Adp
pdb|1PF9|E Chain E, Groel-Groes-Adp
pdb|1PF9|F Chain F, Groel-Groes-Adp
pdb|1PF9|G Chain G, Groel-Groes-Adp
pdb|1PF9|H Chain H, Groel-Groes-Adp
pdb|1PF9|I Chain I, Groel-Groes-Adp
pdb|1PF9|J Chain J, Groel-Groes-Adp
pdb|1PF9|K Chain K, Groel-Groes-Adp
pdb|1PF9|L Chain L, Groel-Groes-Adp
pdb|1PF9|M Chain M, Groel-Groes-Adp
pdb|1PF9|N Chain N, Groel-Groes-Adp
pdb|1SVT|A Chain A, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|B Chain B, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|C Chain C, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|D Chain D, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|E Chain E, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|F Chain F, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|G Chain G, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|H Chain H, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|I Chain I, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|J Chain J, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|K Chain K, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|L Chain L, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|M Chain M, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|N Chain N, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SX4|A Chain A, Groel-Groes-Adp7
pdb|1SX4|B Chain B, Groel-Groes-Adp7
pdb|1SX4|C Chain C, Groel-Groes-Adp7
pdb|1SX4|D Chain D, Groel-Groes-Adp7
pdb|1SX4|E Chain E, Groel-Groes-Adp7
pdb|1SX4|F Chain F, Groel-Groes-Adp7
pdb|1SX4|G Chain G, Groel-Groes-Adp7
pdb|1SX4|H Chain H, Groel-Groes-Adp7
pdb|1SX4|I Chain I, Groel-Groes-Adp7
pdb|1SX4|J Chain J, Groel-Groes-Adp7
pdb|1SX4|K Chain K, Groel-Groes-Adp7
pdb|1SX4|L Chain L, Groel-Groes-Adp7
pdb|1SX4|M Chain M, Groel-Groes-Adp7
pdb|1SX4|N Chain N, Groel-Groes-Adp7
pdb|2YNJ|A Chain A, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|B Chain B, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|C Chain C, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|D Chain D, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|E Chain E, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|F Chain F, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|G Chain G, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|H Chain H, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|I Chain I, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|J Chain J, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|K Chain K, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|L Chain L, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|M Chain M, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|N Chain N, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
Length = 524
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 22 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A A ++ L+ P
Sbjct: 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVP 136
>pdb|2YEY|A Chain A, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|B Chain B, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|C Chain C, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|D Chain D, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|E Chain E, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|F Chain F, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|G Chain G, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|H Chain H, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|I Chain I, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|J Chain J, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|K Chain K, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|L Chain L, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|M Chain M, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|N Chain N, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
Length = 524
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 22 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A A ++ L+ P
Sbjct: 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVP 136
>pdb|1OEL|A Chain A, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|B Chain B, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|C Chain C, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|D Chain D, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|E Chain E, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|F Chain F, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|G Chain G, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
Length = 547
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 22 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A ++ L+ P
Sbjct: 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVP 136
>pdb|3CAU|A Chain A, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|B Chain B, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|C Chain C, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|D Chain D, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|E Chain E, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|F Chain F, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|G Chain G, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|H Chain H, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|I Chain I, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|J Chain J, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|K Chain K, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|L Chain L, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|M Chain M, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|N Chain N, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
Length = 526
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 22 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A ++ L+ P
Sbjct: 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVP 136
>pdb|1KP8|A Chain A, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|B Chain B, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|C Chain C, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|D Chain D, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|E Chain E, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|F Chain F, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|G Chain G, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|H Chain H, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|I Chain I, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|J Chain J, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|K Chain K, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|L Chain L, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|M Chain M, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|N Chain N, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
Length = 547
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 22 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A ++ L+ P
Sbjct: 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVP 136
>pdb|1GR5|A Chain A, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|B Chain B, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|C Chain C, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|D Chain D, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|E Chain E, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|F Chain F, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|G Chain G, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|H Chain H, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|I Chain I, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|J Chain J, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|K Chain K, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|L Chain L, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|M Chain M, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|N Chain N, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|2C7E|A Chain A, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|B Chain B, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|C Chain C, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|D Chain D, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|E Chain E, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|F Chain F, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|G Chain G, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|H Chain H, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|I Chain I, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|J Chain J, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|K Chain K, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|L Chain L, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|M Chain M, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|N Chain N, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
Length = 547
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 22 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A ++ L+ P
Sbjct: 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVP 136
>pdb|1GRL|A Chain A, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|B Chain B, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|C Chain C, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|D Chain D, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|E Chain E, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|F Chain F, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|G Chain G, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
Length = 548
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 23 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 82
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A ++ L+ P
Sbjct: 83 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVP 137
>pdb|1SS8|A Chain A, Groel
pdb|1SS8|B Chain B, Groel
pdb|1SS8|C Chain C, Groel
pdb|1SS8|D Chain D, Groel
pdb|1SS8|E Chain E, Groel
pdb|1SS8|F Chain F, Groel
pdb|1SS8|G Chain G, Groel
Length = 524
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 22 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A ++ L+ P
Sbjct: 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVP 136
>pdb|1SX3|A Chain A, Groel14-(Atpgammas)14
pdb|1SX3|B Chain B, Groel14-(Atpgammas)14
pdb|1SX3|C Chain C, Groel14-(Atpgammas)14
pdb|1SX3|D Chain D, Groel14-(Atpgammas)14
pdb|1SX3|E Chain E, Groel14-(Atpgammas)14
pdb|1SX3|F Chain F, Groel14-(Atpgammas)14
pdb|1SX3|G Chain G, Groel14-(Atpgammas)14
pdb|1SX3|H Chain H, Groel14-(Atpgammas)14
pdb|1SX3|I Chain I, Groel14-(Atpgammas)14
pdb|1SX3|J Chain J, Groel14-(Atpgammas)14
pdb|1SX3|K Chain K, Groel14-(Atpgammas)14
pdb|1SX3|L Chain L, Groel14-(Atpgammas)14
pdb|1SX3|M Chain M, Groel14-(Atpgammas)14
pdb|1SX3|N Chain N, Groel14-(Atpgammas)14
Length = 525
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQD 84
L D +K LGPKG +L G +TKDG ++ +E++++ N A M+ A +
Sbjct: 22 LADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81
Query: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 139
D +GDGTT+ + ++ + + + GM+P L G + A ++ L+ P
Sbjct: 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVP 136
>pdb|1SJP|A Chain A, Mycobacterium Tuberculosis Chaperonin60.2
pdb|1SJP|B Chain B, Mycobacterium Tuberculosis Chaperonin60.2
Length = 504
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 55 LTKDGNTLLKEMQIQNPT----AIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCID 110
+T DG ++ KE+++++P A ++ A DD++GDGTT+ + L+++ R +
Sbjct: 6 ITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVA 65
Query: 111 EGMHPRVLVDGFEIA 125
G +P L G E A
Sbjct: 66 AGANPLGLKRGIEKA 80
>pdb|1Z63|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE IN COMPLEX
With Dsdna
pdb|1Z63|B Chain B, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE IN COMPLEX
With Dsdna
Length = 500
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 131 QFLEKFKTPVVMGDEPDKEILKMVARTTL--RTKLYESLADQLTDIVVNAVLCIRKPEEA 188
+F KF TP+ GD KE LK + + RTK +++ + L D + V C PE+A
Sbjct: 212 EFKSKFATPIKKGDNXAKEELKAIISPFILRRTKYDKAIINDLPDKIETNVYCNLTPEQA 271
>pdb|1Z6A|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE DOMAIN
Length = 500
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 131 QFLEKFKTPVVMGDEPDKEILKMVARTTL--RTKLYESLADQLTDIVVNAVLCIRKPEEA 188
+F KF TP+ GD KE LK + + RTK +++ + L D + V C PE+A
Sbjct: 212 EFKSKFATPIKKGDNMAKEELKAIISPFILRRTKYDKAIINDLPDKIETNVYCNLTPEQA 271
>pdb|3EW7|A Chain A, Crystal Structure Of The Lmo0794 Protein From Listeria
Monocytogenes. Northeast Structural Genomics Consortium
Target Lmr162
Length = 221
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQ 83
L VL + P+ ++VGGA +++ +DGNTLL+ ++ AR Q
Sbjct: 86 LISVLNGTVSPR---LLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQ 137
>pdb|2V78|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase
pdb|2V78|B Chain B, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase
pdb|2V78|C Chain C, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase
pdb|2VAR|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase Complexed With 2-Keto-3-
Deoxygluconate
pdb|2VAR|B Chain B, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase Complexed With 2-Keto-3-
Deoxygluconate
pdb|2VAR|C Chain C, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase Complexed With 2-Keto-3-
Deoxygluconate
Length = 313
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 333 GEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPND 384
GE + + PG L + +HV G E + V+N SC+++ + ND
Sbjct: 8 GEPLIQFNSFNPGPLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGND 59
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,412,440
Number of Sequences: 62578
Number of extensions: 572670
Number of successful extensions: 1649
Number of sequences better than 100.0: 74
Number of HSP's better than 100.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1441
Number of HSP's gapped (non-prelim): 98
length of query: 535
length of database: 14,973,337
effective HSP length: 103
effective length of query: 432
effective length of database: 8,527,803
effective search space: 3684010896
effective search space used: 3684010896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)