Query 009426
Match_columns 535
No_of_seqs 149 out of 1590
Neff 8.6
Searched_HMMs 46136
Date Thu Mar 28 12:58:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009426.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009426hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02347 chap_CCT_zeta T-comp 100.0 9E-109 2E-113 882.9 62.1 527 3-532 2-530 (531)
2 TIGR02339 thermosome_arch ther 100.0 6E-106 1E-110 864.1 59.3 510 5-527 4-519 (519)
3 TIGR02343 chap_CCT_epsi T-comp 100.0 1E-105 3E-110 860.7 58.6 512 6-528 14-532 (532)
4 PTZ00212 T-complex protein 1 s 100.0 3E-105 5E-110 859.4 60.3 513 5-531 10-529 (533)
5 cd03339 TCP1_epsilon TCP-1 (CT 100.0 2E-105 5E-110 860.2 58.4 510 5-525 9-525 (526)
6 TIGR02344 chap_CCT_gamma T-com 100.0 2E-105 5E-110 860.5 58.7 512 5-529 4-523 (525)
7 KOG0361 Chaperonin complex com 100.0 1E-107 3E-112 781.3 36.2 517 5-534 8-529 (543)
8 cd03343 cpn60 cpn60 chaperonin 100.0 4E-105 9E-110 858.8 59.3 510 5-527 3-516 (517)
9 cd03336 TCP1_beta TCP-1 (CTT o 100.0 8E-105 2E-109 853.4 61.0 510 6-529 2-515 (517)
10 cd03335 TCP1_alpha TCP-1 (CTT 100.0 5E-105 1E-109 857.5 58.5 506 11-529 2-527 (527)
11 cd03340 TCP1_eta TCP-1 (CTT or 100.0 9E-105 2E-109 855.6 59.3 512 5-529 4-521 (522)
12 TIGR02341 chap_CCT_beta T-comp 100.0 5E-104 1E-108 845.7 60.9 512 5-530 2-517 (519)
13 TIGR02342 chap_CCT_delta T-com 100.0 3E-104 7E-109 848.8 58.0 505 11-528 3-517 (517)
14 TIGR02340 chap_CCT_alpha T-com 100.0 1E-103 3E-108 847.7 60.5 510 11-533 6-535 (536)
15 TIGR02345 chap_CCT_eta T-compl 100.0 1E-103 2E-108 846.0 58.1 512 5-529 6-521 (522)
16 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 7E-103 2E-107 831.0 56.7 481 7-528 2-483 (484)
17 cd03338 TCP1_delta TCP-1 (CTT 100.0 1E-102 3E-107 838.6 58.1 504 11-527 2-515 (515)
18 TIGR02346 chap_CCT_theta T-com 100.0 1E-101 2E-106 830.1 59.3 510 5-529 5-521 (531)
19 cd03337 TCP1_gamma TCP-1 (CTT 100.0 9E-100 2E-104 807.4 52.0 468 5-526 4-479 (480)
20 KOG0363 Chaperonin complex com 100.0 1.6E-99 3E-104 721.6 37.5 520 1-534 1-525 (527)
21 KOG0358 Chaperonin complex com 100.0 5E-100 1E-104 728.3 34.2 505 10-527 19-533 (534)
22 cd00309 chaperonin_type_I_II c 100.0 5.8E-96 1E-100 778.9 54.9 461 12-526 3-464 (464)
23 cd03341 TCP1_theta TCP-1 (CTT 100.0 1E-95 2E-100 774.7 53.3 462 13-527 4-471 (472)
24 COG0459 GroL Chaperonin GroEL 100.0 2.3E-95 5E-100 767.8 50.9 505 9-531 3-517 (524)
25 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 2.9E-93 6.4E-98 766.0 48.4 482 29-529 1-485 (485)
26 PRK00013 groEL chaperonin GroE 100.0 1.1E-89 2.4E-94 734.6 52.9 461 11-530 4-526 (542)
27 PRK12849 groEL chaperonin GroE 100.0 1.6E-89 3.5E-94 733.3 53.3 462 12-534 5-529 (542)
28 KOG0359 Chaperonin complex com 100.0 1.2E-91 2.7E-96 681.1 28.8 520 1-533 1-520 (520)
29 PTZ00114 Heat shock protein 60 100.0 1.8E-88 3.8E-93 729.0 54.3 463 10-531 15-543 (555)
30 PRK12850 groEL chaperonin GroE 100.0 3.7E-88 7.9E-93 724.1 51.7 460 12-531 6-527 (544)
31 cd03344 GroEL GroEL_like type 100.0 5.2E-88 1.1E-92 720.1 52.1 453 13-526 4-519 (520)
32 PRK12851 groEL chaperonin GroE 100.0 6E-88 1.3E-92 721.9 52.7 460 12-531 6-527 (541)
33 KOG0362 Chaperonin complex com 100.0 6.4E-88 1.4E-92 666.8 42.6 511 4-532 12-525 (537)
34 TIGR02348 GroEL chaperonin Gro 100.0 5.3E-87 1.1E-91 713.8 52.3 456 12-528 4-522 (524)
35 PRK12852 groEL chaperonin GroE 100.0 4.9E-87 1.1E-91 717.2 51.6 459 12-530 6-527 (545)
36 KOG0360 Chaperonin complex com 100.0 2.3E-89 4.9E-94 672.4 29.9 509 10-532 12-540 (545)
37 KOG0364 Chaperonin complex com 100.0 1.1E-89 2.3E-94 668.6 26.9 516 5-533 7-526 (527)
38 CHL00093 groEL chaperonin GroE 100.0 1.2E-85 2.7E-90 704.0 50.1 461 12-530 5-527 (529)
39 PRK14104 chaperonin GroEL; Pro 100.0 2.7E-85 5.7E-90 701.4 52.3 459 12-529 6-526 (546)
40 PLN03167 Chaperonin-60 beta su 100.0 1.3E-83 2.8E-88 691.7 46.6 462 13-531 60-584 (600)
41 KOG0357 Chaperonin complex com 100.0 3.6E-71 7.8E-76 523.2 22.9 375 8-529 19-397 (400)
42 KOG0356 Mitochondrial chaperon 100.0 2.2E-55 4.8E-60 442.3 29.8 458 9-529 16-538 (550)
43 cd03334 Fab1_TCP TCP-1 like do 100.0 3.2E-39 7E-44 315.7 26.5 231 165-411 17-257 (261)
44 cd03333 chaperonin_like chaper 100.0 9.7E-36 2.1E-40 283.8 24.0 208 149-407 2-209 (209)
45 KOG0230 Phosphatidylinositol-4 99.8 1.1E-19 2.5E-24 201.6 16.2 236 165-416 331-575 (1598)
46 PF02579 Nitro_FeMo-Co: Dinitr 22.1 3.6E+02 0.0078 21.0 6.5 32 292-325 55-86 (94)
47 COG3962 Acetolactate synthase 21.5 70 0.0015 33.9 2.5 39 392-432 217-255 (617)
48 KOG2663 Acetolactate synthase, 20.5 1E+02 0.0022 29.9 3.1 28 375-403 121-148 (309)
No 1
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=8.9e-109 Score=882.85 Aligned_cols=527 Identities=72% Similarity=1.104 Sum_probs=497.9
Q ss_pred ccccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHh
Q 009426 3 LRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVA 82 (535)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 82 (535)
..+++++.++.+|.+++..|+.||.+++++++|||||+||+|||+++.|+++|||||+||+++|+++||+++|+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~ni~a~~~l~~~vkttlGP~G~~Kmi~~~~G~~~ITnDG~TIlk~i~i~hP~a~ll~~~a~~ 81 (531)
T TIGR02347 2 VKLLNPKAESLRRDAALMMNINAARGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLNEMQIQHPTASMIARAATA 81 (531)
T ss_pred cccccCCcccccHHHHHHHHHHHHHHHHHHHhcCCCCCccceEEEcCCCCEEEeccHHHHHHhccccChHHHHHHHHHHH
Confidence 34667888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccc
Q 009426 83 QDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTK 162 (535)
Q Consensus 83 ~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk 162 (535)
|++++||||||+++|+++||+++.+++++|+||..|++||+.|.+.++++|+++++++. +..+.+.|.++|+|++++|
T Consensus 82 qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~--~~~~~~~l~~ia~tsl~sK 159 (531)
T TIGR02347 82 QDDITGDGTTSTVILIGELLKQAERYILEGIHPRILTEGFEIARGELLEFLDKFKIKTE--DEVDRELLLNVARTSLRTK 159 (531)
T ss_pred hhhhhcCcHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccCC--CCCCHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999997652 1237889999999999999
Q ss_pred cccchHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeecccccc
Q 009426 163 LYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEY 242 (535)
Q Consensus 163 ~~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~ 242 (535)
+.+.+.++|++++++|+..+.+.+..+|+++|+++++.|++.++|++++|++|++++.+|.||++++||+|++++++|++
T Consensus 160 ~~~~~~~~ls~iv~~Av~~v~~~~~~i~~~~I~i~k~~g~s~~ds~~v~Giv~~~~~~~~~~~~~~~n~~Ill~~~~le~ 239 (531)
T TIGR02347 160 LPIDLADQLTEIVVDAVLAIKKDGEQIDLFMVEIMEMKHKSATDTTLIRGLVLDHGARHPDMPRRVKNAYILTCNVSLEY 239 (531)
T ss_pred cchhhHHHHHHHHHHHHHHHhhcCCCCChhHeEEEEecCCCccccEEEeeEEEecCcCCCCCceeccCceEEEEeCCCCC
Confidence 99999999999999999999764335888899999999999999999999999999999999999999999999999999
Q ss_pred ccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCC-CCCceEEEeccCCCHHHHHHHHHcCceEEEecCh
Q 009426 243 EKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSG-NDNNFVVINQKGIDPLSLDLLARAGIIALRRAKR 321 (535)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~-~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~ 321 (535)
.+++....+.++++++++.+++.|++++++++++|+++++.+|.. .+.+++|+++++|+|.+++||.++||++++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~I~~~~~~~~~~~~~~~~lvi~~k~I~~~a~~~L~~~~I~~i~rv~~ 319 (531)
T TIGR02347 240 EKTEVNSGFFYSNAEQREKLVEAERKFVDDRVKKIIELKKKVCGKSPDKGFVVINQKGIDPPSLDLLAKEGIMALRRAKR 319 (531)
T ss_pred CccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccEEEEeCCCccHHHHHHHHHCCceEEccCCH
Confidence 999999999999999999999999999999999999988554411 1224589999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHHH
Q 009426 322 RNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAV 401 (535)
Q Consensus 322 ~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~ 401 (535)
++|+|||++|||++++++++++++++|+|+.|++..+++++|++|+++++++.|||+|||+|+.+++|++|+++||++++
T Consensus 320 ~~le~ia~~tGa~~i~~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~v~ 399 (531)
T TIGR02347 320 RNMERLTLACGGEALNSVEDLTPECLGWAGLVYETSIGEEKYTFIEEVKNPKSCTILIKGPNDHTIKQIKDAVRDGLRAV 399 (531)
T ss_pred HHHHHHHHHhCCEEecccccCCccccccceEEEEEEECCeEEEEEEcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-CCee
Q 009426 402 KNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-GNIV 480 (535)
Q Consensus 402 ~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~~~~ 480 (535)
++++++|++|||||++|++|+.+| ++++.+.++++++++++|++||+.||++|++|||+|+.+++.++++.|.. +.++
T Consensus 400 ~~~~~~~~vvpGGGa~E~~ls~~l-~~~~~~~~~~~~~~i~~fa~ALe~ip~~La~NaG~d~~~vl~~l~~~~~~~~~~~ 478 (531)
T TIGR02347 400 KNAIEDKCVVPGAGAFEIAAYCHL-KEEKKSVKGKAKLGVEAFANALLVIPKTLAENSGLDAQDTLVKLEDEHDEGGEVV 478 (531)
T ss_pred HHHhhCCcEEeCCCHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCce
Confidence 999999999999999999999999 88988889999999999999999999999999999999999999998854 3678
Q ss_pred eEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCccCC
Q 009426 481 GLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMR 532 (535)
Q Consensus 481 Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~~~~ 532 (535)
|+|+.+|+++||++.|||||+.+|+++|++|+|+|++|||||++|.++|+.-
T Consensus 479 Gid~~~g~~~d~~~~gV~Dp~~vk~~al~~A~e~a~~iLrID~ii~~~~~~~ 530 (531)
T TIGR02347 479 GVDLETGEPIDPEIKGIWDNYRVKKQLIQSATVIASQLLLVDEVMRAGRSML 530 (531)
T ss_pred eeeccCCCccchhhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhCccccC
Confidence 9999999999999999999999999999999999999999999999887653
No 2
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=6.1e-106 Score=864.06 Aligned_cols=510 Identities=37% Similarity=0.600 Sum_probs=488.9
Q ss_pred ccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhh
Q 009426 5 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQD 84 (535)
Q Consensus 5 ~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 84 (535)
+++++.+..+|.+++..|+.||.++++++++||||+||+|||+++.|+++|||||+|||++|+++||+++|+++++++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~ni~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~a~~qd 83 (519)
T TIGR02339 4 ILKEGTQRTKGRDAQRNNIAAAKAVAEAVKSTLGPRGMDKMLVDSLGDVTITNDGATILKEMDIEHPAAKMLVEVAKTQD 83 (519)
T ss_pred cccCCcccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeECCCCCEEEEccHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccc
Q 009426 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLY 164 (535)
Q Consensus 85 ~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~ 164 (535)
+++||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|++++++++ ..+.+.|.++|+|++++|+.
T Consensus 84 ~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~v~---~~~~~~L~~ia~tsl~sk~~ 160 (519)
T TIGR02339 84 AEVGDGTTTAVVLAGELLEKAEDLLEQGIHPTVIIEGYRKAAEKALEIIDEIATKIS---PEDRDLLKKVAETSLTGKAS 160 (519)
T ss_pred HHhCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccC---cccHHHHHHHHHhhhccccc
Confidence 999999999999999999999999999999999999999999999999999999986 33678899999999999998
Q ss_pred -cchHHHHHHHHHHhhhhhcCC--cc--ccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccc
Q 009426 165 -ESLADQLTDIVVNAVLCIRKP--EE--AIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVS 239 (535)
Q Consensus 165 -~~~~~~ls~l~~~a~~~v~~~--~~--~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~ 239 (535)
+.+.++|++++++|+..+.+. ++ .+|+++|++++++|++.+||++++|++|++++.+|.|++.++||||++++++
T Consensus 161 ~~~~~~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~Ggs~~ds~lv~G~vi~~~~~~~~m~~~i~n~kIlll~~~ 240 (519)
T TIGR02339 161 AEVTKDKLANLVVEAVKQVAEKRGDGKYYVDLDNIKIEKKTGGSIDDTELVEGIVVDKEPVHPGMPKRVKNAKIALLDAP 240 (519)
T ss_pred cchhHHHHHHHHHHHHHHHhhhccCCCcccCHHHeEEEEccCcChhcceeEeeEEEecCCCCCCCccccCCCcEEEEecc
Confidence 789999999999999999641 22 5888999999999999999999999999999999999999999999999999
Q ss_pred cccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEec
Q 009426 240 LEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRA 319 (535)
Q Consensus 240 Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v 319 (535)
||++++++++++.+++++++.++++.|++++++++++|.+.+ +++|+++++|++.++++|.++||++++++
T Consensus 241 Le~~~~~~~~~~~i~~~~~~~~~l~~E~~~i~~~v~~i~~~g---------~~lvi~~~~I~~~al~~L~~~gI~~v~~v 311 (519)
T TIGR02339 241 LEVEKTEIDAKIRITDPDQIKKFLDQEEAMLKEMVDKIADAG---------ANVVFCQKGIDDLAQHYLAKAGILAVRRV 311 (519)
T ss_pred ccccccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CcEEEECCCccHHHHHHHHHCCCEEEecC
Confidence 999999999999999999999999999999999999998766 46999999999999999999999999999
Q ss_pred ChhhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHH
Q 009426 320 KRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLR 399 (535)
Q Consensus 320 ~~~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~ 399 (535)
++++|+|||++|||++++++++++++.+|+|+.|++..+|+++|++|++++.+..|||+|||+|+.+++|++|+++||++
T Consensus 312 ~~~~L~rIa~~tGa~ii~~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~r~i~DAl~ 391 (519)
T TIGR02339 312 KKSDIEKLARATGAKIVSSIKEITESDLGYAGLVEERKVGDDKMTFVEGCKNPKAVTILLRGGTEHVVDELERSIQDALH 391 (519)
T ss_pred CHHHHHHHHHHhCCEEeCchhhCChhhccCCceEEEEEECCeEEEEEEcCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999989999999999999999999999999999
Q ss_pred HHHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhc-CCC
Q 009426 400 AVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHD-RGN 478 (535)
Q Consensus 400 ~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~-~~~ 478 (535)
++++++++|++|||||++|++++.+| ++++++.++++++++++|++||+.||++|++|||+|+.+++.+|+..|+ .+.
T Consensus 392 ~~~~~~~~~~vvpGGGa~e~~ls~~l-~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~ 470 (519)
T TIGR02339 392 VVASALEDGKVVAGGGAVEIELALRL-RSYARKIGGREQLAIEAFADALEEIPRILAENAGLDPIDALVELRAKHEKGNK 470 (519)
T ss_pred HHHHHhcCCCEeeCCCHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999 8888888999999999999999999999999999999999999999885 356
Q ss_pred eeeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhc
Q 009426 479 IVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527 (535)
Q Consensus 479 ~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~ 527 (535)
++|+|+.+|++.||++.|||||+.+|+++++.|+|+|++||+||++|.+
T Consensus 471 ~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~ 519 (519)
T TIGR02339 471 NAGINVFTGEIEDMLELGVIEPLRVKEQAIKSATEAATMILRIDDVIAA 519 (519)
T ss_pred ceeEEcCCCCccchhhccceEcHHHHHHHHHHHHHHHHHHHhHhHHhhC
Confidence 7999999999999999999999999999999999999999999999853
No 3
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.3e-105 Score=860.68 Aligned_cols=512 Identities=30% Similarity=0.480 Sum_probs=486.7
Q ss_pred cCc--chhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhh
Q 009426 6 LNP--NAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQ 83 (535)
Q Consensus 6 ~~~--~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~ 83 (535)
+++ +.++++|.+++..|+.||..+++++++||||+||+|||+++.|+++|||||+||+++|+++||+++|+++++++|
T Consensus 14 ~~~~~~~~~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~G~~~ITnDG~tIlk~l~~~hP~akll~~~a~~q 93 (532)
T TIGR02343 14 IKDQDKKKRLKGLEAIKSNIAAAKSVASILRTSLGPKGMDKMLQSPDGDITVTNDGATILSQMDVDNPIAKLMVELSKSQ 93 (532)
T ss_pred hccccccccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCCCCEEEeCcHHHHHHHccCCCHHHHHHHHHHHHH
Confidence 455 467899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhcccc
Q 009426 84 DDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKL 163 (535)
Q Consensus 84 ~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~ 163 (535)
++++||||||+++|+++||+++.+++++|+||+.|++||+.|++.++++|++++++++. +..+.+.|.++|+|++++|+
T Consensus 94 d~~~GDGTttvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~-~~~~~~~l~~ia~t~l~sK~ 172 (532)
T TIGR02343 94 DDEIGDGTTGVVVLAGALLEQAEALLDKGIHPIKIAEGFEVAARVAVEHLEEISEEISD-DNNNKEPLIQAAKTSLGSKI 172 (532)
T ss_pred HHHhcCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCc-CCCCHHHHHHHHHHhhccch
Confidence 99999999999999999999999999999999999999999999999999999998751 12357889999999999999
Q ss_pred ccchHHHHHHHHHHhhhhhcCC-ccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeecccccc
Q 009426 164 YESLADQLTDIVVNAVLCIRKP-EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEY 242 (535)
Q Consensus 164 ~~~~~~~ls~l~~~a~~~v~~~-~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~ 242 (535)
.+.+.++|++++++|+..+.+. +..+|+++|++++++|++.+||++++|++|++++.++.||+.++||||++++++||+
T Consensus 173 ~~~~~~~ls~i~~~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~ds~~v~Gi~i~~~~~~~~m~~~~~n~kI~l~~~~le~ 252 (532)
T TIGR02343 173 VSKCHRRFAEIAVDAVLMVADMERRDVDFDLIKVEGKVGGSLEDTKLIKGIIIDKDFSHPQMPKEVKDAKIAILTCPFEP 252 (532)
T ss_pred hhHHHHHHHHHHHHHHHhhhhcCCCcCCHHHeeEEEecCCCcccceeEeeEEEecCcCCCCCCeeecCCcEEEEEeeccc
Confidence 9999999999999999999653 347899999999999999999999999999999999999999999999999999999
Q ss_pred ccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChh
Q 009426 243 EKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRR 322 (535)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~ 322 (535)
++++++.++.+++++++..+.+.|++++++.+++|.+.+ +++|+++++|||.++++|.++||+++++++++
T Consensus 253 ~~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~l~~i~~~g---------~~lvi~~~~I~~~al~~L~~~~i~~v~~~~~~ 323 (532)
T TIGR02343 253 PKPKTKHKLDISSVEEYKKLQKYEQQKFAEMIDDIKKSG---------ANIVICQWGFDDEANHLLLQNDLPAVRWVGGH 323 (532)
T ss_pred cccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEeCCCccHHHHHHHHHCCcEEEEcCCHH
Confidence 999999999999999999999999999999999998765 35999999999999999999999999999999
Q ss_pred hHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECc--eEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHH
Q 009426 323 NMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGE--EKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRA 400 (535)
Q Consensus 323 ~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~--~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~ 400 (535)
+|+|||++|||++++++++++++++|+|+.|++..+|+ ++|+++++|++++.+||+|||+|+.+++|++|+++||+++
T Consensus 324 ~l~~Ia~~tGa~~i~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~i~~~~~~~~~TIllrG~t~~~l~E~er~l~DAl~~ 403 (532)
T TIGR02343 324 ELELIAIATGGRIVPRFEELSEDKLGKAGLVREISFGTTKDRMLVIEQCKNSKAVTIFIRGGNKMIIEEAKRSIHDALCV 403 (532)
T ss_pred HHHHHHHHhCCEEecccccCCHhHCcccceEEEEEecCCcceEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987 4899999999899999999999999999999999999999
Q ss_pred HHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC--CC
Q 009426 401 VKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR--GN 478 (535)
Q Consensus 401 ~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~--~~ 478 (535)
+++++++|++|||||++|++++++| ++++.+.++++++++++|++||+.||++|++|||+|+.+++.+++..|+. ..
T Consensus 404 v~~~i~~~~vvpGGGa~e~~ls~~l-~~~~~~~~~~~~~~i~~fa~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~ 482 (532)
T TIGR02343 404 VRNLIKNSRIVYGGGAAEISCSLAV-SQEADKYSGVEQYAIRAFADALEEIPMALAENSGLDPIGTLSDLKSLQMKEKNP 482 (532)
T ss_pred HHHHHhCCCEEeCcCHHHHHHHHHH-HHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999 88888889999999999999999999999999999999999999998852 45
Q ss_pred eeeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcC
Q 009426 479 IVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 528 (535)
Q Consensus 479 ~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~ 528 (535)
++|+|+.+|++.||++.|||||+.+|+++|+.|+|+|++||+||++|.++
T Consensus 483 ~~Gid~~~g~i~d~~~~gV~Dp~~vk~~al~~A~e~a~~iL~id~ii~~~ 532 (532)
T TIGR02343 483 HLGVDCLGDGTNDMKEQGVFETLIGKKQQIQLATQLVRMILKIDDVISPG 532 (532)
T ss_pred ccCeeCCCCccccchhccCeecHHHHHHHHHHHHHHHHHHHhHhhhccCC
Confidence 79999999999999999999999999999999999999999999999763
No 4
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=2.5e-105 Score=859.45 Aligned_cols=513 Identities=31% Similarity=0.477 Sum_probs=486.8
Q ss_pred ccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecC-----CCCeEEecChHHHhhhccccChHHHHHHHH
Q 009426 5 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGG-----AGDIKLTKDGNTLLKEMQIQNPTAIMIART 79 (535)
Q Consensus 5 ~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~-----~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~ 79 (535)
+++++.++.+|.+++..|+.||..++++++|||||+||+|||+++ .|+++|||||+|||++|+++||+++|++++
T Consensus 10 ~~~~~~~~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~Kmi~~~~~~~~~G~~~iTnDG~TIlk~i~~~hP~akll~~~ 89 (533)
T PTZ00212 10 VLKQGAQEEKGETARLQSFVGAIAVADLVKTTLGPKGMDKILQPMSEGPRSGNVTVTNDGATILKSVWLDNPAAKILVDI 89 (533)
T ss_pred HhcCCcccccHHHHHHHHHHHHHHHHHHHhCCCCCCccceEeecCCCcccCCCEEEeccHHHHHHhccCcCHHHHHHHHH
Confidence 567888899999999999999999999999999999999999998 599999999999999999999999999999
Q ss_pred HHhhhcccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhh
Q 009426 80 AVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 159 (535)
Q Consensus 80 ~~~~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl 159 (535)
+++|++++||||||+|+|+++||+++.+++++|+||..|++||+.|++.++++|++++++++..+..+.+.|.++|+|++
T Consensus 90 a~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~t~l 169 (533)
T PTZ00212 90 SKTQDEEVGDGTTSVVVLAGELLREAEKLLDQKIHPQTIIEGWRMALDVARKALEEIAFDHGSDEEKFKEDLLNIARTTL 169 (533)
T ss_pred HHhhhhhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCccchhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999886222223678999999999
Q ss_pred ccccccchHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccc
Q 009426 160 RTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVS 239 (535)
Q Consensus 160 ~sk~~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~ 239 (535)
++|+.+.+.++|++++++|+..+.+ .+++++|++++++|++++||++++|+++++++.+ .|+++++||||++++++
T Consensus 170 ~sk~~~~~~~~l~~i~~~av~~i~~---~~~~~~I~i~ki~Ggsi~ds~lv~G~v~~~~~~~-~~~~~i~n~kIll~~~~ 245 (533)
T PTZ00212 170 SSKLLTVEKDHFAKLAVDAVLRLKG---SGNLDYIQIIKKPGGTLRDSYLEDGFILEKKIGV-GQPKRLENCKILVANTP 245 (533)
T ss_pred cccccchhHHHHHHHHHHHHHHHhc---cCCccceEEEEecCcCccccEEEEeEEEecccCC-CCCccccCCcEEEEeCC
Confidence 9999999999999999999999965 4788899999999999999999999999998765 57999999999999999
Q ss_pred cccccccc-cceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEe
Q 009426 240 LEYEKSEV-NAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRR 318 (535)
Q Consensus 240 Le~~~~~~-~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~ 318 (535)
||+++++. ++++.++++++++.+.+.|++++++++++|+..+ +++++++++|++.++++|.++||+++++
T Consensus 246 Le~~k~~~~~~~~~i~~~~~~~~l~~~E~~~i~~~v~~Ii~~g---------v~vvv~~~~I~d~a~~~L~~~~I~avr~ 316 (533)
T PTZ00212 246 MDTDKIKIYGAKVKVDSMEKVAEIEAAEKEKMKNKVDKILAHG---------CNVFINRQLIYNYPEQLFAEAGIMAIEH 316 (533)
T ss_pred CCCCcccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CeEEEeCCCccHHHHHHHHHCCCEEEec
Confidence 99999997 7889999999999999999999999999998766 4689999999999999999999999999
Q ss_pred cChhhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHH
Q 009426 319 AKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGL 398 (535)
Q Consensus 319 v~~~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal 398 (535)
+++++++|||++|||++++++++++++++|+|+.|++..+|+++|++|++|+.++.|||+|||+|+.+++|++|+++||+
T Consensus 317 v~~~~l~rIa~~tGa~iis~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~DAl 396 (533)
T PTZ00212 317 ADFDGMERLAAALGAEIVSTFDTPEKVKLGHCDLIEEIMIGEDKLIRFSGCAKGEACTIVLRGASTHILDEAERSLHDAL 396 (533)
T ss_pred CCHHHHHHHHHHhCCEEeecCCCCCHHHccCCceEEEEEECCeEEEEEEccCCCCEEEEEEECCChhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred HHHHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-C
Q 009426 399 RAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-G 477 (535)
Q Consensus 399 ~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~ 477 (535)
+++++++++|++|||||++|++++.+| ++++++.++++++++++|++||+.||++|++|||+|+.+++.+|+..|.. +
T Consensus 397 ~vv~~~i~~~~vVpGGGa~e~~ls~~L-~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~ 475 (533)
T PTZ00212 397 CVLSQTVKDTRVVLGGGCSEMLMANAV-EELAKKVEGKKSLAIEAFAKALRQIPTIIADNGGYDSAELVSKLRAEHYKGN 475 (533)
T ss_pred HHHHHHhhCCCEeeCCCHHHHHHHHHH-HHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC
Confidence 999999999999999999999999999 88988889999999999999999999999999999999999999999954 4
Q ss_pred CeeeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCccC
Q 009426 478 NIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNM 531 (535)
Q Consensus 478 ~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~~~ 531 (535)
.++|+|+.+|++.||++.|||||+.+|+++|+.|+|+|++|||||++|...+.+
T Consensus 476 ~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 529 (533)
T PTZ00212 476 KTAGIDMEKGTVGDMKELGITESYKVKLSQLCSATEAAEMILRVDDIIRCAPRQ 529 (533)
T ss_pred CccceeccCCcccchhhccceecHHHHHHHHHHHHHHHHHHHhhhHhhhcCCcc
Confidence 679999999999999999999999999999999999999999999999886533
No 5
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.2e-105 Score=860.23 Aligned_cols=510 Identities=29% Similarity=0.459 Sum_probs=484.7
Q ss_pred ccCcc--hhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHh
Q 009426 5 VLNPN--AEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVA 82 (535)
Q Consensus 5 ~~~~~--~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 82 (535)
+++++ .+...|.+++..|+.||.++++++++||||+||+|||+++.|+++|||||+||+++|+++||+++|+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~ni~~~~~i~~~v~tslGP~G~~kmi~~~~G~~~iTnDG~tIlk~l~~~hP~akll~~~a~~ 88 (526)
T cd03339 9 IVREQEKKKRLKGLEAHKSHILAAKSVANILRTSLGPRGMDKILVSPDGEVTVTNDGATILEKMDVDHQIAKLLVELSKS 88 (526)
T ss_pred EecCCCccccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEECCCCCEEEeCcHHHHHHHhcccCHHHHHHHHHHHh
Confidence 34665 4688999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccc
Q 009426 83 QDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTK 162 (535)
Q Consensus 83 ~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk 162 (535)
|++++||||||+++|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|++. +..+.+.|.++|+|++++|
T Consensus 89 q~~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~-~~~~~~~l~~ia~tsl~sk 167 (526)
T cd03339 89 QDDEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEQACKIAVEHLEEIADKIEF-SPDNKEPLIQTAMTSLGSK 167 (526)
T ss_pred hhhhhcCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCC-CcccHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999999999999999999999998852 1236788999999999999
Q ss_pred cccchHHHHHHHHHHhhhhhcCC-ccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccccc
Q 009426 163 LYESLADQLTDIVVNAVLCIRKP-EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLE 241 (535)
Q Consensus 163 ~~~~~~~~ls~l~~~a~~~v~~~-~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le 241 (535)
+.+.+.++|++++++|+..+.+. +..+|+++|+|++++|++.+||++++|++|++++.+++|++.++||||++++++||
T Consensus 168 ~~~~~~~~~s~i~v~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~dS~~v~Givi~~~~~~~~m~~~~~n~kI~ll~~~le 247 (526)
T cd03339 168 IVSRCHRQFAEIAVDAVLSVADLERKDVNFELIKVEGKVGGRLEDTKLVKGIVIDKDFSHPQMPKEVKDAKIAILTCPFE 247 (526)
T ss_pred chhhHHHHHHHHHHHHHHHHhhcCCCccchHHeEEEEecCcCHHHcceeeeEEEecccCCCCCCceecCCCEEEEEeccc
Confidence 99999999999999999999753 24678899999999999999999999999999999999999999999999999999
Q ss_pred cccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecCh
Q 009426 242 YEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKR 321 (535)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~ 321 (535)
+++++++.++.++++++++.+.+.|++++++.+++|.+.+ +++|+++++||+.++++|.++||++++++++
T Consensus 248 ~~~~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g---------~~lvi~~~~I~~~al~~L~~~~I~av~~v~~ 318 (526)
T cd03339 248 PPKPKTKHKLDITSVEDYKKLQEYEQKYFREMVEQVKDAG---------ANLVICQWGFDDEANHLLLQNGLPAVRWVGG 318 (526)
T ss_pred CCccccceEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHCC---------CCEEEeCCCCCHHHHHHHHHCCCEEEEeCCH
Confidence 9999999999999999999999999999999999998765 4599999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECc--eEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHH
Q 009426 322 RNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGE--EKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLR 399 (535)
Q Consensus 322 ~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~--~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~ 399 (535)
++|+|||++|||+++++++++++.++|+|+.|++..+|. ++|+|+++|++++.|||+|||+|+.+++|++|+++||++
T Consensus 319 ~~LerIa~~tGa~ii~~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~l~DAl~ 398 (526)
T cd03339 319 VEIELIAIATGGRIVPRFEDLSPEKLGKAGLVREISFGTTKDKMLVIEGCPNSKAVTIFIRGGNKMIIEEAKRSLHDALC 398 (526)
T ss_pred HHHHHHHHHhCCEEecchhhCChhhcccCceEEEEEecCCCcEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999985 688999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhc-C-C
Q 009426 400 AVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHD-R-G 477 (535)
Q Consensus 400 ~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~-~-~ 477 (535)
++++++++|++|||||++|++++.+| ++++.+.++++++++++|++||+.||++|++|||+|+.+++.+++..|+ . .
T Consensus 399 ~~~~~~~~~~vvpGGGa~e~~ls~~l-~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~ 477 (526)
T cd03339 399 VVRNLIRDNRIVYGGGAAEISCSLAV-EKAADKCSGIEQYAMRAFADALESIPLALAENSGLNPIETLSEVKARQVKEKN 477 (526)
T ss_pred HHHHHhhCCCEEeCCCHHHHHHHHHH-HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999 8888888899999999999999999999999999999999999999994 2 4
Q ss_pred CeeeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHh
Q 009426 478 NIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVI 525 (535)
Q Consensus 478 ~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii 525 (535)
.++|+|+.+|++.||++.|||||+.+|+++|+.|+|+|++|||||++|
T Consensus 478 ~~~Gid~~~g~~~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~iD~ii 525 (526)
T cd03339 478 PHLGIDCLGRGTNDMKEQKVFETLISKKQQILLATQVVKMILKIDDVI 525 (526)
T ss_pred CeEeeecCCCccCchhhcCceecHHHHHHHHHHHHHHHHHHhhhceec
Confidence 579999999999999999999999999999999999999999999987
No 6
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2.5e-105 Score=860.48 Aligned_cols=512 Identities=29% Similarity=0.503 Sum_probs=488.3
Q ss_pred ccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhh
Q 009426 5 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQD 84 (535)
Q Consensus 5 ~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 84 (535)
+++++.+..+|.+++..|+.||..++++++|||||+||+|||+++.|+++|||||+|||++|+++||+++|+++++++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~ni~a~~~l~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~a~~q~ 83 (525)
T TIGR02344 4 VLNQNTKRESGRKAQLSNIQAAKAVADIIRTTLGPRAMLKMLLDPMGGIVMTNDGNAILREIDVAHPAAKSMIELSRTQD 83 (525)
T ss_pred eccCCCccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCceEEcCCCCEEEEccHHHHHHhccCCCHHHHHHHHHHHhhh
Confidence 45777789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccc
Q 009426 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLY 164 (535)
Q Consensus 85 ~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~ 164 (535)
+++||||||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|++++++++ ..+.+.|.++++|++++|+.
T Consensus 84 ~~~GDGTtt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~---~~~~~~l~~i~~t~l~sk~~ 160 (525)
T TIGR02344 84 EEVGDGTTSVIILAGEMLSVAEPFLEQNIHPTIIIRAYKKALDDALSVLEEISIPVD---VNDDAAMLKLIQSCIGTKFV 160 (525)
T ss_pred hhccCCcchhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccC---CCCHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999999999999999999999986 44678899999999999999
Q ss_pred cchHHHHHHHHHHhhhhhcCCc----cccCcc-cEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccc
Q 009426 165 ESLADQLTDIVVNAVLCIRKPE----EAIDLF-MVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVS 239 (535)
Q Consensus 165 ~~~~~~ls~l~~~a~~~v~~~~----~~~~~~-~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~ 239 (535)
+.|.+.|++++++|+..+.+.+ ..+|++ +|++++++|++.+||++++|++|++++.++.|+++++||+|++++++
T Consensus 161 ~~~~~~ls~l~~~Ai~~v~~~~~~~~~~~d~~~~I~i~ki~Gg~~~dS~lv~Gvvi~k~~~~~~m~~~~~n~kIlll~~~ 240 (525)
T TIGR02344 161 SRWSDLMCDLALDAVRTVKRDLGNGRKEIDIKRYAKVEKIPGGDIEDSCVLKGVMINKDVTHPKMRRYIENPRIVLLDCP 240 (525)
T ss_pred hhHHHHHHHHHHHHHHHhhccccCCCCccChhhceEEEEecCCChHhcCcccceEEecccCCCCCccccCCCCEEEEecc
Confidence 9999999999999999997532 245655 48999999999999999999999999999999999999999999999
Q ss_pred cccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEec
Q 009426 240 LEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRA 319 (535)
Q Consensus 240 Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v 319 (535)
|++.+++.++++.++++++++++++.|++++++++++|.+.+ +++|+|+|+|++.++++|.++||++++++
T Consensus 241 Le~~~~~~~~~i~i~~~~~~~~~l~~E~~~l~~~v~~i~~~~---------~~vIi~~k~I~dla~~~l~~~~I~av~~v 311 (525)
T TIGR02344 241 LEYKKGESQTNVEIMKEEDWNRILQMEEEYVQLMCEDIIAVK---------PDLVITEKGVSDLAQHYLLKANISAIRRV 311 (525)
T ss_pred cccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEeCCCccHHHHHHHhHCCceEEecC
Confidence 999999999999999999999999999999999999998755 67999999999999999999999999999
Q ss_pred ChhhHHHHHHHhCCEEecccCCCCCCCCcc-cceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHH
Q 009426 320 KRRNMERLVLACGGEAVNSVDDLTPGCLGW-AGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGL 398 (535)
Q Consensus 320 ~~~~l~~la~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal 398 (535)
++++|+|||++|||++++++++++++.+|+ |+.|++..+++++|++|++|+++..|||+|||+|+.+++|++|+++||+
T Consensus 312 ~~~~LerIa~~tGa~ii~~l~~l~~~~lG~~~~~v~~~~ig~~~~~~~~g~~~~~~~TIlLrG~t~~~l~E~er~l~DAl 391 (525)
T TIGR02344 312 RKTDNNRIARACGATIVNRPEELRESDVGTGCGLFEVKKIGDEYFTFFTECKDPKACTILLRGASKDVLNEIERNLQDAM 391 (525)
T ss_pred CHHHHHHHHHHhCCeEecchhhCCHhhcCCcCCEEEEEEECCeEEEEEEcCCCCCEEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 9999999999999999999998999999999999999999999999999
Q ss_pred HHHHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC--
Q 009426 399 RAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-- 476 (535)
Q Consensus 399 ~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-- 476 (535)
++++++++++++|||||++|++|+.+| ++++.+.++++++++++|++||+.||++|++|||+|+.+++.+|+..|+.
T Consensus 392 ~~vk~~~~~~~vvpGGGa~e~~ls~~l-~~~~~~~~~~~~~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~ 470 (525)
T TIGR02344 392 AVARNVLLEPKLLPGGGATEMAVSVYL-AKKASKLEGVQQWPYRAVADALEIIPRTLAQNCGVNVIRTLTELRAKHAQEG 470 (525)
T ss_pred HHHHHHHhCCCcccCCCHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccC
Confidence 999999999999999999999999999 88888889999999999999999999999999999999999999999853
Q ss_pred CCeeeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCc
Q 009426 477 GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 529 (535)
Q Consensus 477 ~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~ 529 (535)
+.++|+|+.+|++.||++.|||||+.+|+++|+.|+|+|++|||||++|.+.+
T Consensus 471 ~~~~Gid~~~g~~~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~ 523 (525)
T TIGR02344 471 NCTWGIDGETGKIVDMKEKGIWEPLAVKLQTYKTAIESACMLLRIDDIVSGVK 523 (525)
T ss_pred CCeEeEECCCCccccchhccceecHHHHHHHHHHHHHHHHHHHhhhHHhhcCC
Confidence 36799999999999999999999999999999999999999999999998755
No 7
>KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-107 Score=781.28 Aligned_cols=517 Identities=27% Similarity=0.465 Sum_probs=496.0
Q ss_pred ccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhh
Q 009426 5 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQD 84 (535)
Q Consensus 5 ~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 84 (535)
+++++++..+|.-.+.+|++||..+++.++|||||+|+||+|++..|+++|||||+||||.|++-||+|+.+++.+++||
T Consensus 8 ~lkegtd~sqGk~QlvSNInaC~~v~e~~rtTLGP~GmDkLivd~~g~~tIsNDGATIlKlldivhPaaktlVdia~sQD 87 (543)
T KOG0361|consen 8 LLKEGTDPSQGKGQLVSNINACTAVAEALRTTLGPRGMDKLIVDSKGKTTISNDGATILKLLDIVHPAAKTLVDIARSQD 87 (543)
T ss_pred EeecccCcccCchhhhhchHHHHHHHHHHHhccCccccceeeecCCCcEEEecCcHHHHHHHhhcChhHHHHHHHHhhcc
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCC-CCCCHHHHHHHHHHhhcccc
Q 009426 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMG-DEPDKEILKMVARTTLRTKL 163 (535)
Q Consensus 85 ~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~-~~~~~~~l~~ia~tsl~sk~ 163 (535)
.++||||||+|+|++++|+++-.+++.|+||..|+++|+.|...|++.++++++.++.. ...-++.|+++|.|+++||+
T Consensus 88 aEVGDGTTSVv~la~E~lk~~Kpfiedgv~~~~iir~~rka~~l~v~ki~elav~i~~~~~~~~r~lL~KcA~T~lsSKl 167 (543)
T KOG0361|consen 88 AEVGDGTTSVVLLAAEFLKEAKPFIEDGVHPQLIIRAYRKARQLAVEKIKELAVEIDGSSKTELRELLEKCAATALSSKL 167 (543)
T ss_pred ccccCCceeEeeeHHHHHHhhhhHhhcCCCHHHHHHHHHHHHHHHHHHHHHheeEecccchhhHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999988631 12236789999999999999
Q ss_pred ccchHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCC---CcccccCceeEeecccc
Q 009426 164 YESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPD---MKRRAENCYILTCNVSL 240 (535)
Q Consensus 164 ~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~---~~~~~~n~kIll~~~~L 240 (535)
..+..++|+++++||+..+.+ ..++++|-|.|++||++.||.+++|+.|++.|.+.. .|+++.||||+++|..|
T Consensus 168 I~~ek~fF~~MvVDAV~~ld~---~l~~~mIGIKKV~GG~~~dS~lv~GVAFkKtFsYAGfEqqPKk~~NpkIl~LnvEL 244 (543)
T KOG0361|consen 168 IRQEKEFFAKMVVDAVLTLDN---DLDLNMIGIKKVPGGAMEDSLLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNVEL 244 (543)
T ss_pred hhhhHHHHHHHHHHHHHhhcc---ccchhhcceeecCCCccchhhhccceeeeehccccchhhCccccCCceEEEEeeee
Confidence 999999999999999998853 578889999999999999999999999999998763 48999999999999999
Q ss_pred ccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecC
Q 009426 241 EYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAK 320 (535)
Q Consensus 241 e~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~ 320 (535)
|.+.++.++++...++++++..+.+||.++++++++|++.+ .+++++.-.|.|.|.+||++++|+|-.||+
T Consensus 245 ElKaEkdNAEiRv~~v~eyQ~iVDAEW~Ii~~KL~ki~~sG---------AnVVLSkLpIGD~ATQyFAdrdiFCAGRV~ 315 (543)
T KOG0361|consen 245 ELKAEKDNAEIRVDNVEEYQAIVDAEWNIIYDKLDKIHESG---------ANVVLSKLPIGDLATQYFADRDIFCAGRVP 315 (543)
T ss_pred eecccccCceeecCCHHHHHHHHhHHHHHHHHHHHHHHhcC---------CeEEEecccchHHHHHHhhccCceecCcCC
Confidence 99999999999999999999999999999999999999887 359999999999999999999999999999
Q ss_pred hhhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHH
Q 009426 321 RRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRA 400 (535)
Q Consensus 321 ~~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~ 400 (535)
.+||.|+..++|+++.++..++.+..+|.|..++|.++|+++|-+|++|+..++||+++||+.++.++|.+|++|||+++
T Consensus 316 ~eDl~Rv~~acGGsi~tt~~~i~~~~LG~C~~FeE~QvG~eRyN~Fegcp~aktcTliLRGgaeqfieE~eRSlHDAImI 395 (543)
T KOG0361|consen 316 EEDLNRVMQACGGSIQTTVSDIKEEVLGTCALFEERQVGGERYNLFEGCPKAKTCTLILRGGAEQFIEETERSLHDAIMI 395 (543)
T ss_pred HHHHHHHHHhcCcchhhhhhhcchhhcchhhhHHHHhhcchhhhhhcCCCccceeEEEEeccHHHHHHHHhhhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-CCe
Q 009426 401 VKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-GNI 479 (535)
Q Consensus 401 ~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~~~ 479 (535)
+|.++++..+|+|||++||+++++| ++|+.++.+++|+.+.+|++|||.||++|+.|+|+|..+++++||..|.+ +.|
T Consensus 396 Vrralkn~~vVaGGGaiEMElSk~l-Rd~S~ti~gK~q~~i~A~akalEvIPrqLc~NaGfDa~~ilnkLR~rHA~G~~w 474 (543)
T KOG0361|consen 396 VRRALKNDSVVAGGGAIEMELSKYL-RDYSRTIAGKQQLFINAYAKALEVIPRQLCDNAGFDATNILNKLRQRHAQGEKW 474 (543)
T ss_pred HHHHhccCcEeeCCceeeehHHHHH-HHhhcccCcHHHHHHHHHHHHHHHhHHHHhhhcCCcHHHHHHHHHHHhhcCCce
Confidence 9999999999999999999999999 99999999999999999999999999999999999999999999999954 589
Q ss_pred eeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCccCCCC
Q 009426 480 VGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRKP 534 (535)
Q Consensus 480 ~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~~~~~~ 534 (535)
+|+|+.+..+.|+++.+||||..||.+++..|+|+||+||++|+.|...++++.|
T Consensus 475 ~Gvdi~~e~i~dn~~~~VwEP~~VK~Nai~aateAa~lIlsvDeTikn~~S~~~~ 529 (543)
T KOG0361|consen 475 YGVDINTEGIADNFEKFVWEPSIVKINAITAATEAACLILSVDETIKNPKSQSAP 529 (543)
T ss_pred eeeeecccchhhHHHhhccChHHHHHHHHHHHHHhhhheEehhhhhcCCcccCCC
Confidence 9999999999999999999999999999999999999999999999999877665
No 8
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=4e-105 Score=858.84 Aligned_cols=510 Identities=39% Similarity=0.622 Sum_probs=489.5
Q ss_pred ccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhh
Q 009426 5 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQD 84 (535)
Q Consensus 5 ~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 84 (535)
+++++.+..+|.+++..|+.||.++++++++||||+|++|||+++.|+++|||||+||+++|+++||+++|+++++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~n~~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~a~~q~ 82 (517)
T cd03343 3 ILKEGTQRTSGRDAQRMNIAAAKAVAEAVRTTLGPKGMDKMLVDSLGDVTITNDGATILKEMDIEHPAAKMLVEVAKTQD 82 (517)
T ss_pred ccCCCcccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCceeEcCCCCEEEEccHHHHHHHccCcCHHHHHHHHHHHHHH
Confidence 45777788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccc
Q 009426 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLY 164 (535)
Q Consensus 85 ~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~ 164 (535)
+++||||||+++|+++|++++.+++++|+||..|++||++|.+.++++|++++++++ ..+.+.+.++|+|++++|+.
T Consensus 83 ~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~---~~~~~~l~~va~ts~~sk~~ 159 (517)
T cd03343 83 EEVGDGTTTAVVLAGELLEKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIKVD---PDDKDTLRKIAKTSLTGKGA 159 (517)
T ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhcccC---CCCHHHHHHHHHHhhcccch
Confidence 999999999999999999999999999999999999999999999999999999885 33688999999999999999
Q ss_pred cchHHHHHHHHHHhhhhhcCCc---cccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccccc
Q 009426 165 ESLADQLTDIVVNAVLCIRKPE---EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLE 241 (535)
Q Consensus 165 ~~~~~~ls~l~~~a~~~v~~~~---~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le 241 (535)
+.+.++|++++++|+..+.+.+ ..+|+++|++++++|++.++|++++|++|++++.+|.|++.++||||++++++||
T Consensus 160 ~~~~~~l~~l~~~A~~~v~~~~~~~~~~~~~~I~i~k~~Ggs~~ds~lv~G~v~~~~~~~~~m~~~~~n~~Illl~~~Le 239 (517)
T cd03343 160 EAAKDKLADLVVDAVLQVAEKRDGKYVVDLDNIKIEKKTGGSVDDTELIRGIVIDKEVVHPGMPKRVENAKIALLDAPLE 239 (517)
T ss_pred hhHHHHHHHHHHHHHHHhhhccCCCccccHHHeeEEeecCcCHHHcceeeeEEEeccCCCCCCccccCCCcEEEEecccc
Confidence 9999999999999999986532 2688899999999999999999999999999999999999999999999999999
Q ss_pred cccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecCh
Q 009426 242 YEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKR 321 (535)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~ 321 (535)
+++++.++++.+++.+++.++++.|++++++++++|.+.+ +++|+++++|++.++++|.++||++++++++
T Consensus 240 ~~k~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g---------~~lvi~~~~I~~~al~~l~~~gI~~v~~v~~ 310 (517)
T cd03343 240 VKKTEIDAKIRITSPDQLQAFLEQEEAMLKEMVDKIADTG---------ANVVFCQKGIDDLAQHYLAKAGILAVRRVKK 310 (517)
T ss_pred CCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEeCCCccHHHHHHHhHCCcEEEEeCCH
Confidence 9999999999999999999999999999999999998765 4599999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHHH
Q 009426 322 RNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAV 401 (535)
Q Consensus 322 ~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~ 401 (535)
++|+|||++|||++++++++++++++|+|+.|++..+|+++|+++++|++++.|||+|||+|+.+++|++|+++||++++
T Consensus 311 ~~l~~Ia~~tGa~ii~~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~e~~~~l~Dal~~~ 390 (517)
T cd03343 311 SDMEKLARATGAKIVTNIDDLTPEDLGEAELVEERKVGDDKMVFVEGCKNPKAVTILLRGGTEHVVDELERALEDALRVV 390 (517)
T ss_pred HHHHHHHHHhCCEEecchhhCChhhCCccceEEEEEECCeEEEEEEcCCCCceEEEEEECCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998999999999999999999999999999999
Q ss_pred HHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhc-CCCee
Q 009426 402 KNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHD-RGNIV 480 (535)
Q Consensus 402 ~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~-~~~~~ 480 (535)
++++++|++|||||++|++++.+| ++++.+.++++++++++|++||+.||++|++|||+|+.+++.+++..|+ .+.++
T Consensus 391 ~~~~~~~~vvpGGG~~e~~ls~~L-~~~~~~~~~~~~~~~~~~~~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~ 469 (517)
T cd03343 391 ADALEDGKVVAGGGAVEIELAKRL-REYARSVGGREQLAVEAFADALEEIPRTLAENAGLDPIDTLVELRAAHEKGNKNA 469 (517)
T ss_pred HHHHhCCCeeeCCCHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCce
Confidence 999999999999999999999999 8888888999999999999999999999999999999999999999885 35679
Q ss_pred eEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhc
Q 009426 481 GLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527 (535)
Q Consensus 481 Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~ 527 (535)
|+|+.+|++.||++.|||||+.+|+++|+.|+|+|++||+||++|+.
T Consensus 470 G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~ 516 (517)
T cd03343 470 GLDVYTGEVVDMLEKGVIEPLRVKKQAIKSATEAATMILRIDDVIAA 516 (517)
T ss_pred eeecCCCCccchhhcCceecHHHHHHHHHHHHHHHHHHHhhhHhhhC
Confidence 99999999999999999999999999999999999999999999975
No 9
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=8e-105 Score=853.42 Aligned_cols=510 Identities=29% Similarity=0.455 Sum_probs=483.8
Q ss_pred cCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecC--CCCeEEecChHHHhhhccccChHHHHHHHHHHhh
Q 009426 6 LNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGG--AGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQ 83 (535)
Q Consensus 6 ~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~--~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~ 83 (535)
++++.+.++|.+++..|+.||.+++++++|||||+||+|||+++ .|+++|||||+||+++|+++||+++|+++++++|
T Consensus 2 ~~~~~~~~~~~~a~~~n~~~~~~i~~~v~tslGP~G~~Kmi~~~~~~g~~~iTnDG~tIlk~l~~~hP~akll~~~a~~q 81 (517)
T cd03336 2 LKDGAQEEKGETARLSSFVGAIAIGDLVKTTLGPKGMDKILQSVGRSGGVTVTNDGATILKSIGVDNPAAKVLVDISKVQ 81 (517)
T ss_pred CCCccccccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEeecCCCCCCeEEeccHHHHHHHccCcChHHHHHHHHHHHH
Confidence 45667889999999999999999999999999999999999998 4999999999999999999999999999999999
Q ss_pred hcccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhcccc
Q 009426 84 DDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKL 163 (535)
Q Consensus 84 ~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~ 163 (535)
++++||||||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|++++++++.....+.+.|.++|+|++++|+
T Consensus 82 d~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~t~lssk~ 161 (517)
T cd03336 82 DDEVGDGTTSVTVLAAELLREAEKLVAQKIHPQTIIEGYRMATAAAREALLSSAVDHSSDEEAFREDLLNIARTTLSSKI 161 (517)
T ss_pred HhHhCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcccccchhHHHHHHHHHhhccccc
Confidence 99999999999999999999999999999999999999999999999999999998842112246789999999999999
Q ss_pred ccchHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccccccc
Q 009426 164 YESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYE 243 (535)
Q Consensus 164 ~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~~ 243 (535)
.+.+.++|++++++|+..+.+ .+++++|++++++|++++||++++|+++++++.+ .|++.++||||++++++||++
T Consensus 162 ~~~~~~~l~~l~~~A~~~v~~---~~~~~~i~i~ki~G~s~~ds~l~~G~v~~~~~~~-~~~~~~~n~kIli~~~~le~~ 237 (517)
T cd03336 162 LTQDKEHFAELAVDAVLRLKG---SGNLDAIQIIKKLGGSLKDSYLDEGFLLDKKIGV-NQPKRIENAKILIANTPMDTD 237 (517)
T ss_pred cchhHHHHHHHHHHHHHHhhc---cCCccceeEEEccCCCccceEEEeeEEEecccCC-CCCCeeccccEEEEecCCCcc
Confidence 999999999999999999853 5788899999999999999999999999998765 468999999999999999999
Q ss_pred cccc-cceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChh
Q 009426 244 KSEV-NAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRR 322 (535)
Q Consensus 244 ~~~~-~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~ 322 (535)
++++ ++++.++++++++.+.+.|++++++++++|++.+ ++++++++.|++.+++||.++||+++++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~E~~~~~~~v~~I~~~g---------v~~v~~~~~I~~~~~~~l~~~~I~av~~v~~~ 308 (517)
T cd03336 238 KIKIFGAKVRVDSTAKVAEIEEAEKEKMKNKVEKILKHG---------INCFINRQLIYNYPEQLFADAGIMAIEHADFD 308 (517)
T ss_pred cccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CeEEEeCCCccHHHHHHHHHCCcEEEecCCHH
Confidence 9997 7899999999999999999999999999998766 46899999999999999999999999999999
Q ss_pred hHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHHHH
Q 009426 323 NMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVK 402 (535)
Q Consensus 323 ~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~~ 402 (535)
+|+|||++|||++++++++++++++|+|+.|++..+|+++|++|++|++++.|||+|||+|+.+++|.+|+++||+++++
T Consensus 309 ~L~rIa~~tGa~ii~~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~Dal~~~~ 388 (517)
T cd03336 309 GVERLALVTGGEIASTFDHPELVKLGTCKLIEEIMIGEDKLIRFSGVAAGEACTIVLRGASQQILDEAERSLHDALCVLA 388 (517)
T ss_pred HHHHHHHHhCCEEecccCCCCcccccccceEEEEEECCeEEEEEEccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred HHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-CCeee
Q 009426 403 NTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-GNIVG 481 (535)
Q Consensus 403 ~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~~~~G 481 (535)
+++++|++|||||++|++++.+| ++++++.++++++++++|++||+.||++|++|||+|+.+++.+|+..|++ +.++|
T Consensus 389 ~~i~~~~vvpGGGa~e~~ls~~l-~~~~~~~~~~~~~~i~~~a~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~G 467 (517)
T cd03336 389 QTVKDTRVVLGGGCSEMLMAKAV-EELAKKTPGKKSLAIEAFAKALRQLPTIIADNAGYDSAELVAQLRAAHYNGNTTAG 467 (517)
T ss_pred HHHhCCCEEeCCCHHHHHHHHHH-HHHhhhCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcee
Confidence 99999999999999999999999 88988889999999999999999999999999999999999999999954 46799
Q ss_pred EecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCc
Q 009426 482 LNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 529 (535)
Q Consensus 482 id~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~ 529 (535)
+|+.+|++.||++.|||||+.+|+++|+.|+|+|++|||||++|..++
T Consensus 468 id~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~ 515 (517)
T cd03336 468 LDMRKGTVGDMKELGITESFKVKRQVLLSASEAAEMILRVDDIIKCAP 515 (517)
T ss_pred eecCCCCccchhhcCceecHHHHHHHHHHHHHHHHHHHhHhHHhhcCC
Confidence 999999999999999999999999999999999999999999999865
No 10
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=5.4e-105 Score=857.46 Aligned_cols=506 Identities=29% Similarity=0.485 Sum_probs=480.3
Q ss_pred hhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhhcccCCC
Q 009426 11 EVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDG 90 (535)
Q Consensus 11 ~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDG 90 (535)
+.++|.+++..|+.||.++++++++||||+||+|||+++.|+++|||||+||+++|+++||+++|++++|++|++++|||
T Consensus 2 ~~~~~~~~~~~ni~a~~~l~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~akll~~~a~~q~~~~GDG 81 (527)
T cd03335 2 ERTSGQDVRTQNVTAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKILVELAQLQDKEVGDG 81 (527)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeCcHHHHHHhccccChHHHHHHHHHHHHHHHhCCC
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhh-ccccccCCCCCCHHHHHHHHHHhhccccccchHH
Q 009426 91 TTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEK-FKTPVVMGDEPDKEILKMVARTTLRTKLYESLAD 169 (535)
Q Consensus 91 ttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~-~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~~~ 169 (535)
|||+++|+++||+++.+++++|+||+.|++||+.|++.++++|++ +++|++ ..+.+.|.++|+|++++|+.+...+
T Consensus 82 TTt~vvLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~---~~~~~~l~~ia~tsl~sK~~~~~~~ 158 (527)
T cd03335 82 TTSVVIIAAELLKRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSISVD---NLGKESLINVAKTSMSSKIIGADSD 158 (527)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCC---ccCHHHHHHHHHHHhcccccchhHH
Confidence 999999999999999999999999999999999999999999996 888886 4478889999999999999988899
Q ss_pred HHHHHHHHhhhhhcC--Ccc--ccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccccccccc
Q 009426 170 QLTDIVVNAVLCIRK--PEE--AIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKS 245 (535)
Q Consensus 170 ~ls~l~~~a~~~v~~--~~~--~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~~~~ 245 (535)
+|++++++|+..+.. .++ .+|+++|++++++|++.++|++++|++|++++.++.||+.++||||++++++|++.++
T Consensus 159 ~ls~l~~~A~~~v~~~~~~~~~~~~~~~I~i~~~~Ggs~~~s~li~Givi~~~~~~~~m~~~i~n~kIlll~~~Le~~~~ 238 (527)
T cd03335 159 FFANMVVDAILAVKTTNEKGKTKYPIKAVNILKAHGKSAKESYLVNGYALNCTRASQGMPTRVKNAKIACLDFNLQKTKM 238 (527)
T ss_pred HHHHHHHHHHHHhhcccccCCCccCHHHeEEEEecCcChhhcceeeeEEEecccCCCCCcccccCCcEEEEeccCCCCcc
Confidence 999999999999852 212 5889999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChhhHH
Q 009426 246 EVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNME 325 (535)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~~l~ 325 (535)
+.++++.++++++++.+.+.|++++++++++|.+.+ +++|+++++||+.+++||.++||++++++++++|+
T Consensus 239 ~~~~~~~~~~~~~le~~~~~E~~~l~~~i~~i~~~g---------~~lvi~~k~I~d~al~~L~~~~I~~v~~v~~~~le 309 (527)
T cd03335 239 KLGVQVVVTDPEKLEKIRQRESDITKERIKKILAAG---------ANVVLTTGGIDDMCLKYFVEAGAMAVRRVKKEDLR 309 (527)
T ss_pred ccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEeCCCCcHHHHHHHHHCCcEEEEeCCHHHHH
Confidence 999999999999999999999999999999998876 45999999999999999999999999999999999
Q ss_pred HHHHHhCCEEecccCCC------CCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHH
Q 009426 326 RLVLACGGEAVNSVDDL------TPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLR 399 (535)
Q Consensus 326 ~la~~tGa~ii~~~~~l------~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~ 399 (535)
|||++|||+++++++++ +++++|+|+.|++..+++++|++|+++++++.|||+|||+|+.+++|++|+++||++
T Consensus 310 rIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~g~~~~~~~TIllrG~t~~~l~e~er~i~Dal~ 389 (527)
T cd03335 310 RIAKATGATLVSTLANLEGEETFDPSYLGEAEEVVQERIGDDELILIKGTKKRSSASIILRGANDFMLDEMERSLHDALC 389 (527)
T ss_pred HHHHHhCCEEecChhhcCcccccCHhhCccCceEEEEEECCeEEEEEEcCCCCCEEEEEEeCCcHHHHHHHHHHHHHHHH
Confidence 99999999999988655 344899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC---
Q 009426 400 AVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR--- 476 (535)
Q Consensus 400 ~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~--- 476 (535)
++++++++|++|||||++|++|+.+| ++++++.++++++++++|++||+.||++|++|||+|+.+++.+|+..|+.
T Consensus 390 ~~~~~~~~~~vvpGGGa~e~~ls~~L-~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~~~~~l~~~h~~~~~ 468 (527)
T cd03335 390 VVKRTLESNSVVPGGGAVETALSIYL-ENFATTLGSREQLAIAEFAEALLVIPKTLAVNAAKDATELVAKLRAYHAAAQV 468 (527)
T ss_pred HHHHHhhCCCEeeCCCHHHHHHHHHH-HHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999 88988889999999999999999999999999999999999999998843
Q ss_pred ------CCeeeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCc
Q 009426 477 ------GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 529 (535)
Q Consensus 477 ------~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~ 529 (535)
++++|+|+.+|++.||++.|||||+.+|.++|+.|+|+|++|||||++|.++|
T Consensus 469 ~~~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~~k~~~i~~A~e~a~~iLrID~ii~~~~ 527 (527)
T cd03335 469 KPDKKHLKWYGLDLINGKVRDNLEAGVLEPTVSKIKSLKFATEAAITILRIDDLIKLNP 527 (527)
T ss_pred ccccccCceEeEECCCCcccchhhccceecHHHHHHHHHHHHHHHHHHHhhcceeecCC
Confidence 24789999999999999999999999999999999999999999999998754
No 11
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=9e-105 Score=855.57 Aligned_cols=512 Identities=29% Similarity=0.497 Sum_probs=487.2
Q ss_pred ccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhh
Q 009426 5 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQD 84 (535)
Q Consensus 5 ~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 84 (535)
+++++.+.++|.+++.+|+.||.++++++++||||+||+|||+++.|+++|||||+||+++|+++||+++|+++++++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~ni~a~~~i~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~akll~~~a~~q~ 83 (522)
T cd03340 4 LLKEGTDTSQGKGQLISNINACQAIADAVRTTLGPRGMDKLIVDGRGKVTISNDGATILKLLDIVHPAAKTLVDIAKSQD 83 (522)
T ss_pred cccCCcccccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEEEcCCCCEEEeccHHHHHHHccccCHHHHHHHHHHHHhH
Confidence 46777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCC-CCCHHHHHHHHHHhhcccc
Q 009426 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGD-EPDKEILKMVARTTLRTKL 163 (535)
Q Consensus 85 ~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~-~~~~~~l~~ia~tsl~sk~ 163 (535)
+++||||||+|+|+++||+++.+++++|+||+.|++||+.|++.++++|++++++++..+ ..+.+.|.++|+|++++|+
T Consensus 84 ~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~~l~~ia~t~l~sK~ 163 (522)
T cd03340 84 AEVGDGTTSVVVLAGEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVNIDKEDKEEQRELLEKCAATALNSKL 163 (522)
T ss_pred hHhCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCcccccccHHHHHHHHHHHhccCc
Confidence 999999999999999999999999999999999999999999999999999999886211 1236779999999999999
Q ss_pred ccchHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCC---CcccccCceeEeecccc
Q 009426 164 YESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPD---MKRRAENCYILTCNVSL 240 (535)
Q Consensus 164 ~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~---~~~~~~n~kIll~~~~L 240 (535)
...+.++|++++++|+..+.+ .+|.++|++++++|++.+||++++|++|++++.+|. ||+.++||+|++++++|
T Consensus 164 ~~~~~~~l~~l~~~A~~~v~~---~~~~~~I~i~~i~Ggs~~ds~lv~Giv~~k~~~~~~~~~~~~~~~n~kIll~~~~L 240 (522)
T cd03340 164 IASEKEFFAKMVVDAVLSLDD---DLDLDMIGIKKVPGGSLEDSQLVNGVAFKKTFSYAGFEQQPKKFKNPKILLLNVEL 240 (522)
T ss_pred chhHHHHHHHHHHHHHHHhcc---cCChhHheEeeecCCChhhceeeeeEEEecccCccccccCCccccCCeEEEEeCCC
Confidence 999999999999999999954 467889999999999999999999999999999875 58999999999999999
Q ss_pred ccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecC
Q 009426 241 EYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAK 320 (535)
Q Consensus 241 e~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~ 320 (535)
|+.+++.+..+.++++++++.+.+.|++++.+++++|++.+ +++|+++++|+|.+++||.++||+++++++
T Consensus 241 e~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g---------~~vvl~~~~i~d~a~~~l~~~~I~~~~~v~ 311 (522)
T cd03340 241 ELKAEKDNAEVRVEDPEEYQAIVDAEWKIIYDKLEKIVKSG---------ANVVLSKLPIGDLATQYFADRDIFCAGRVP 311 (522)
T ss_pred CCCccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEeCCCCcHHHHHHHHHCCcEEEEeCC
Confidence 99999999999999999999999999999999999998876 469999999999999999999999999999
Q ss_pred hhhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHH
Q 009426 321 RRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRA 400 (535)
Q Consensus 321 ~~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~ 400 (535)
+++|+|||++|||++++++++++++++|+|+.|++..+|+++|++|++|+.++.|||++||+++..++|++|+++||+++
T Consensus 312 ~~~l~rIa~~tGa~ii~~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~ 391 (522)
T cd03340 312 EEDLKRVAQATGGSIQTTVSNITDDVLGTCGLFEERQVGGERYNIFTGCPKAKTCTIILRGGAEQFIEEAERSLHDAIMI 391 (522)
T ss_pred HHHHHHHHHHHCCEEeeccccCCccccccceEEEEEEECCEEEEEEECCCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-C-C
Q 009426 401 VKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-G-N 478 (535)
Q Consensus 401 ~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~-~ 478 (535)
+++++++|++|||||++|++++.+| ++++++.++++++++++|++||+.||++|++|||+|+.+++.+|+..|+. + .
T Consensus 392 ~~~~i~~~~vvpGGG~~E~~ls~~l-~~~~~~~~~~~~~~~~~fa~aL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~ 470 (522)
T cd03340 392 VRRAIKNDSVVAGGGAIEMELSKYL-RDYSRTIAGKQQLVINAFAKALEIIPRQLCDNAGFDATDILNKLRQKHAQGGGK 470 (522)
T ss_pred HHHHhcCCCEEECcCHHHHHHHHHH-HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999 88888889999999999999999999999999999999999999999954 3 5
Q ss_pred eeeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCc
Q 009426 479 IVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 529 (535)
Q Consensus 479 ~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~ 529 (535)
++|||+.+|++.||++.|||||+.||+++++.|+|+|++||+||++|.+++
T Consensus 471 ~~Gid~~~g~i~d~~~~gV~dp~~vk~~~i~~A~e~a~~iL~id~ii~~~~ 521 (522)
T cd03340 471 WYGVDINNEGIADNFEAFVWEPSLVKINALTAATEAACLILSVDETIKNPK 521 (522)
T ss_pred eeeeeCCCCcccchhhcCceEcHHHHHHHHHHHHHHHHHHhhhhhheeCCC
Confidence 799999999999999999999999999999999999999999999998754
No 12
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=5.4e-104 Score=845.68 Aligned_cols=512 Identities=29% Similarity=0.464 Sum_probs=484.1
Q ss_pred ccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCC--CCeEEecChHHHhhhccccChHHHHHHHHHHh
Q 009426 5 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGA--GDIKLTKDGNTLLKEMQIQNPTAIMIARTAVA 82 (535)
Q Consensus 5 ~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~--g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 82 (535)
+++++.+.++|.+++..|+.|+.+++++++|||||+||+|||+++. |+++|||||+|||++|+++||+++|++++|++
T Consensus 2 ~~~~~~~~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~~~G~~~iTnDG~tIlk~l~i~hP~akll~~~a~~ 81 (519)
T TIGR02341 2 IFKDNAQEERGENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSGSSESGIMVTNDGATILKSIGVDNPAAKVLVDMSKV 81 (519)
T ss_pred CccCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEEeccCCCCCeEEeccHHHHHHHccCcChHHHHHHHHHHH
Confidence 4567778899999999999999999999999999999999999985 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccc
Q 009426 83 QDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTK 162 (535)
Q Consensus 83 ~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk 162 (535)
|++++||||||+|+|+++||+++.+++++|+||..|++||+.|++.++++|++++++++.....+.+.|.++|+|++++|
T Consensus 82 qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~L~~ia~t~l~sk 161 (519)
T TIGR02341 82 QDDEVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRRATKAAQEALKKSSIDNGSDKTKFRDDLLNIARTTLSSK 161 (519)
T ss_pred hHhhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999885211224678999999999999
Q ss_pred cccchHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeecccccc
Q 009426 163 LYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEY 242 (535)
Q Consensus 163 ~~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~ 242 (535)
+.+.+.++|++++++|+..+.+ ..++++|++++++|+++++|++++|+++++++.+ .||+.++||+|++++++|++
T Consensus 162 i~~~~~~~~s~l~~~av~~i~~---~~~~~~i~i~k~~G~s~~~s~l~~G~v~~~~~~~-~~~~~~~n~~Ili~~~~Le~ 237 (519)
T TIGR02341 162 ILSQHKDHFAQLAVDAVLRLKG---SGNLDAIQIIKKLGGSLNDSYLDEGFLLEKKIGV-NQPKRIENAKILIANTPMDT 237 (519)
T ss_pred hhhhHHHHHHHHHHHHHHHhcc---CCChhheEEEEccCCCcccceEEeeEEEeccCCC-CCceeeccccEEEEecCCCC
Confidence 9999999999999999999854 2467789999999999999999999999998754 57889999999999999999
Q ss_pred ccccc-cceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecCh
Q 009426 243 EKSEV-NAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKR 321 (535)
Q Consensus 243 ~~~~~-~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~ 321 (535)
.++++ ++++.+++++++..+.+.|+++++++++.|++.+ ++++++++.|++.++++|.++||++++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~I~~~g---------~~~v~~~~~I~~~~~~~l~~~~I~~v~~~~~ 308 (519)
T TIGR02341 238 DKVKVFGSRVRVDSTAKVAELEAAEKEKMKEKVEKILKHN---------INCFINRQLIYNYPEQLFADAGVMAIEHADF 308 (519)
T ss_pred CccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcC---------CcEEEECCcCCHHHHHHHHHCCcEEEecCCH
Confidence 99997 8899999999999999999999999999998766 4689999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHHH
Q 009426 322 RNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAV 401 (535)
Q Consensus 322 ~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~ 401 (535)
.+|+|||++|||++++++++++++++|+|+.|++..+|+++|++|++|+.++.|||+|||+|+.+++|++|+++||++++
T Consensus 309 ~~l~~ia~~tGa~ii~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~ 388 (519)
T TIGR02341 309 EGIERLALVTGGEIVSTFDHPELVKLGSCDLIEEIMIGEDKLLKFSGVKLGEACTIVLRGATQQILDESERSLHDALCVL 388 (519)
T ss_pred HHHHHHHHHhCCEEecccccCCccccccCceEEEEEECCEEEEEEEcCCCCCEEEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-CCee
Q 009426 402 KNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-GNIV 480 (535)
Q Consensus 402 ~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~~~~ 480 (535)
+++++++++||||||+|++++.+| ++++++.++++++++++|++||+.||++|++|||+|+.+++.+|+..|+. ..++
T Consensus 389 ~~~~~~~~vvpGGGa~e~~ls~~l-~~~~~~~~~~~~~~i~~~a~Ale~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~ 467 (519)
T TIGR02341 389 SQTVKESRTVLGGGCSEMLMSKAV-AVEAQKVPGKEALAVEAFARALRQLPTIIADNAGFDSAELVAQLRAAHYNGNHTM 467 (519)
T ss_pred HHHHhCCCEEeCCCHHHHHHHHHH-HHHhhcCCChHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999999999999 88888889999999999999999999999999999999999999999954 4579
Q ss_pred eEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCcc
Q 009426 481 GLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRN 530 (535)
Q Consensus 481 Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~~ 530 (535)
|+|+.+|++.||++.|||||+.||+++++.|+|+|++||+||++|.++|.
T Consensus 468 Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~~ 517 (519)
T TIGR02341 468 GLDMEEGEIADMRKLGIIESYKVKRAVVSSAAEAAEVILRVDNIIKAAPR 517 (519)
T ss_pred ceecCCCcccchhhccceEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999998773
No 13
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=3.1e-104 Score=848.83 Aligned_cols=505 Identities=29% Similarity=0.452 Sum_probs=481.4
Q ss_pred hhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhhcccCCC
Q 009426 11 EVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDG 90 (535)
Q Consensus 11 ~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDG 90 (535)
+...+.++...|+.||..+++++++||||+||+|||+++.|+++|||||+|||++|+++||+++|+++++++|++++|||
T Consensus 3 ~~~~~~~~~~~ni~a~~~ia~~~kttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~akll~~~a~~qd~~~GDG 82 (517)
T TIGR02342 3 DKDKPTDVRTSNIVAAKAVADAIRTSLGPRGMDKMIQSGNGEVIITNDGATILKQMGVIHPAAKMLVELSKAQDIEAGDG 82 (517)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEEcCCCCEEEeCCHHHHHHhccccChHHHHHHHHHHHHHHHhCCC
Confidence 34677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccchHHH
Q 009426 91 TTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQ 170 (535)
Q Consensus 91 ttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~~~~ 170 (535)
|||+++|+++||+++.+++++|+||+.|++||+.|++.++++|+++++|++ ..+.+.|.++|+|++++|+.+.+.++
T Consensus 83 Ttt~viLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~---~~~~~~l~~va~tsl~sK~~~~~~~~ 159 (517)
T TIGR02342 83 TTSVVILAGALLGACETLLERGIHPTTISESFQIAADEAIKILDEMSIPVD---LSDREILIKSATTSLSSKVVSQYSSL 159 (517)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccC---ccCHHHHHHHHHHHhccccchhHHHH
Confidence 999999999999999999999999999999999999999999999999886 44778899999999999999999999
Q ss_pred HHHHHHHhhhhhcCC--ccccCcccEEEEEecCCcccccEEEEEEEEeecCCC-CCCcccccCceeEeeccccccccccc
Q 009426 171 LTDIVVNAVLCIRKP--EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRH-PDMKRRAENCYILTCNVSLEYEKSEV 247 (535)
Q Consensus 171 ls~l~~~a~~~v~~~--~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~-~~~~~~~~n~kIll~~~~Le~~~~~~ 247 (535)
|++++++|+..+.+. ++.+|+++|+++++.|++.++|++++|++|++++.+ +.||+.++||||++++++|++++++.
T Consensus 160 ls~l~~~a~~~v~~~~~~~~~~~~~i~i~k~~Ggs~~ds~li~Givl~k~~~~~~~mpk~i~n~kI~ll~~~Le~~~~~~ 239 (517)
T TIGR02342 160 LAPLAVDAVLKVIDPENDKNVDLNDIKVVKKLGGTIDDTELIEGLVFTQKASRSAGGPTRIEKAKIGLIQFQISPPKTDM 239 (517)
T ss_pred HHHHHHHHHHHHhccccCCccCHHHeeEEeccCCChhhcEEEeeEEEeccccccCCCCccccCCcEEEEecCCCCCcccc
Confidence 999999999999753 347899999999999999999999999999999998 48999999999999999999999999
Q ss_pred cceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCC-----CHHHHHHHHHcCceEEEecChh
Q 009426 248 NAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGI-----DPLSLDLLARAGIIALRRAKRR 322 (535)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i-----~~~al~~l~~~~I~~v~~v~~~ 322 (535)
...+.++++++++.+++.|++++++.+++|.+.+ +++|+++|+| ++.++++|.++||+++++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~E~~~l~~~v~~i~~~g---------~~lvi~~~~I~~~~l~~l~~~~l~~~~I~av~~v~~~ 310 (517)
T TIGR02342 240 ENQVIVNDYAQMDRVLKEERKYILNIVKKIKKTG---------CNVLLIQKSILRDAVNDLALHFLAKMKIMVVKDIERE 310 (517)
T ss_pred cceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEECCCcccccccHHHHHHHhhCCceEEecCCHH
Confidence 9999999999999999999999999999998766 3588999998 9999999999999999999999
Q ss_pred hHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCC-CeeEEEecCCCHHHHHHHHHHHHhHHHHH
Q 009426 323 NMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNP-HSCTILIKGPNDHTIAQIKDAVRDGLRAV 401 (535)
Q Consensus 323 ~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-~~~TI~i~G~t~~~l~e~~~~l~dal~~~ 401 (535)
+|+|||++|||+++++++++++.++|+|+.|++..+++++|+++.+++++ +.+||+|||+|+.+++|++|+++||++++
T Consensus 311 ~LerIa~~tGa~ii~~~~~l~~~~LG~~~~v~~~~~~~~~~~~i~~~~~~~~~~tIllrG~t~~~l~E~er~i~DAl~~v 390 (517)
T TIGR02342 311 EVEFICKTIGCKPIASIDHFTADKLGSAELVEEVTTDGGKIIKITGIQNAGKTVTVLLRGSNKLVIDEAERSLHDALCVI 390 (517)
T ss_pred HHHHHHHHHCCEEEcchhhcCcccCcCCceEEEEEECCeEEEEEEccCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999874 89999999999999999999999999999
Q ss_pred HHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-CCee
Q 009426 402 KNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-GNIV 480 (535)
Q Consensus 402 ~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~~~~ 480 (535)
+++++++++|||||++|++++.+| ++++++.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|+. +.++
T Consensus 391 ~~~~~~~~~VpGGGa~e~~ls~~l-~~~~~~~~~~~~~~i~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~ 469 (517)
T TIGR02342 391 RSLVKKRGLIPGGGAPEIEIAIKL-SKLARTMKGVESYCVRAFADALEVIPYTLAENAGLNPIDVVTELRNRHANGEKYA 469 (517)
T ss_pred HHHhhCCCEEECcCHHHHHHHHHH-HHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999999999999 88988889999999999999999999999999999999999999999954 4679
Q ss_pred eEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcC
Q 009426 481 GLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 528 (535)
Q Consensus 481 Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~ 528 (535)
|+|+.+|+++||++.|||||+.+|+++++.|+|+|++|||||++|.++
T Consensus 470 Gid~~~g~i~d~~~~gI~dp~~vk~~ai~~A~e~a~~iL~iD~ii~~~ 517 (517)
T TIGR02342 470 GISVRKGGITDMLEEEVLQPLLVTTSAVTLASETVRMILKIDDIVFTR 517 (517)
T ss_pred ceecCCCCccchhhccceEcHHHHHHHHHHHHHHHHHHhcccceeecC
Confidence 999999999999999999999999999999999999999999998763
No 14
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.3e-103 Score=847.66 Aligned_cols=510 Identities=29% Similarity=0.486 Sum_probs=482.8
Q ss_pred hhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhhcccCCC
Q 009426 11 EVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDG 90 (535)
Q Consensus 11 ~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDG 90 (535)
++++|.+++..|+.||..+++++++||||+||+|||+++.|+++|||||+||+++|+++||+++|+++++++|++++|||
T Consensus 6 ~~~~~~~~~~~ni~~~~~l~~~vkttlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~hP~akll~~~a~~qd~~~GDG 85 (536)
T TIGR02340 6 ERTSGQDVRTQNVTAAMAIANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKILVELAQLQDREVGDG 85 (536)
T ss_pred ceecHHHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeccHHHHHHHhcccChHHHHHHHHHHHHHHHhCCC
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhc-cccccCCCCCCHHHHHHHHHHhhccccccchHH
Q 009426 91 TTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKF-KTPVVMGDEPDKEILKMVARTTLRTKLYESLAD 169 (535)
Q Consensus 91 ttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~-~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~~~ 169 (535)
|||+++|+++||+++.+++++|+||+.|++||+.|++.++++|++. ++|++ ..+.+.+.++|+|++++|+.+.+.+
T Consensus 86 TTt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~---~~~~~~l~~va~tsl~sK~~~~~~~ 162 (536)
T TIGR02340 86 TTSVVIIAAELLKRADELIKRKVHPTSIISGYRLACKEAVKYIKENLSVSVD---ELGREALINVAKTSMSSKIIGLDSD 162 (536)
T ss_pred hhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCC---cccHHHHHHHHHHHhccccchhhHH
Confidence 9999999999999999999999999999999999999999999974 88886 4467889999999999999999999
Q ss_pred HHHHHHHHhhhhhcC--Cc--cccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccccccccc
Q 009426 170 QLTDIVVNAVLCIRK--PE--EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKS 245 (535)
Q Consensus 170 ~ls~l~~~a~~~v~~--~~--~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~~~~ 245 (535)
+|++++++|+..+.. .+ ..+|+++|++++++|++.+++++++|++|++++.++.|++.++||+|++++++|++.++
T Consensus 163 ~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~G~s~~~s~~i~Gi~i~~~~~~~~m~~~~~n~kIli~~~~L~~~~~ 242 (536)
T TIGR02340 163 FFSNIVVDAVLAVKMTNENGETKYPIKAVNILKAHGGSARESYLVKGYALNCTRASQQMPKRIKKAKIACLDFNLQKQKM 242 (536)
T ss_pred HHHHHHHHHHHHHhcccccCccccchHHeEEEEecCCCccccEEEEEEEEecccCCCCCcceecCCcEEEEecCCCCCcc
Confidence 999999999999852 11 25788999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChhhHH
Q 009426 246 EVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNME 325 (535)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~~l~ 325 (535)
+.++++.++++.+++.+.+.|+.++.+.+++|.+.+ +++|+++++|++.+++||.++||++++++++++|+
T Consensus 243 ~~~~~~~~~~~~~le~~~~~E~~~i~~~i~~I~~~g---------~~lvi~~k~I~~~a~~~L~k~~I~~i~rv~~~~Le 313 (536)
T TIGR02340 243 ALGVQIVVDDPAKLEGIRQREADITKERIKKILKAG---------ANVVLTTGGIDDMCLKYFVEAGAMGVRRCKKEDLK 313 (536)
T ss_pred cCceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEeCCCCcHHHHHHHHHCCcEEEecCCHHHHH
Confidence 999999999999999999999999999999998876 35888999999999999999999999999999999
Q ss_pred HHHHHhCCEEecccCCC------CCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHH
Q 009426 326 RLVLACGGEAVNSVDDL------TPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLR 399 (535)
Q Consensus 326 ~la~~tGa~ii~~~~~l------~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~ 399 (535)
|||++|||++++++.++ +++++|+|+.|++..+++++|++|++++.++.|||+|||+|+.+++|++|+++||++
T Consensus 314 rIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~TIlirG~t~~~l~E~~r~i~DAl~ 393 (536)
T TIGR02340 314 RIAKATGGTLVSTLADLEGEETFDASYLGFADEVVEERIADDECILIKGTKGRKSASIILRGANDFMLDEMERSLHDALC 393 (536)
T ss_pred HHHHHhCCEEecchhhcCccccccccccccCceEEEEEECCeEEEEEEcCCCCCEEEEEEeCCcHHHHHHHHHHHHHHHH
Confidence 99999999999987544 445699999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC---
Q 009426 400 AVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR--- 476 (535)
Q Consensus 400 ~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~--- 476 (535)
++++++++|++|||||++|++++.+| ++++++.++++++++++|++||+.||++|++|||+|+.+++.+++..|+.
T Consensus 394 ~~~~~~~~~~vVpGGGa~e~~ls~~l-~~~~~~~~~~~~~~~~~fa~AL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~ 472 (536)
T TIGR02340 394 VVKRTLESNSVVPGGGAVETALSIYL-ENFATTLGSREQLAIAEFAEALLIIPKVLAVNAALDSTELVAKLRAYHAAAQL 472 (536)
T ss_pred HHHHHhcCCCEEECCCHHHHHHHHHH-HHHhhhCCChhHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCc
Confidence 99999999999999999999999999 88888888999999999999999999999999999999999999998843
Q ss_pred ------CCeeeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCccCCC
Q 009426 477 ------GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRK 533 (535)
Q Consensus 477 ------~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~~~~~ 533 (535)
..++|||+.+|++.||++.|||||+.+|+++|+.|+|+|++|||||++|..++.+++
T Consensus 473 ~~~~~~~~~~Gid~~~g~~~d~~~~gI~Dp~~~k~~~l~~A~e~a~~iL~ID~ii~~~~~~~~ 535 (536)
T TIGR02340 473 KPEKKHLKWYGLDLSNGKIRDNKEAGVLEPAVSKVKSLKFATEAAITILRIDDLIKLNPEQSK 535 (536)
T ss_pred ccccccCceEeEEccCCccccchhccceecHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCC
Confidence 236999999999999999999999999999999999999999999999999886665
No 15
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=9.6e-104 Score=846.02 Aligned_cols=512 Identities=29% Similarity=0.475 Sum_probs=487.2
Q ss_pred ccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhh
Q 009426 5 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQD 84 (535)
Q Consensus 5 ~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 84 (535)
+++++.++++|.+++..|+.||.++++++++||||+||+|||+++.| ++|||||+|||++|+++||+++|+++++++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g-~~iTnDG~TIlk~i~~~hP~a~ll~~~a~~q~ 84 (522)
T TIGR02345 6 LLKEGTDTSQGKGQLISNINACVAIAEILKTTLGPRGMDKLIVGKNG-ATVSNDGATILKLLDIVHPAAKTLVDIAKSQD 84 (522)
T ss_pred hhcCCcccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEEECCCC-cEEeCcHHHHHHHhcccChHHHHHHHHHHHHH
Confidence 45778889999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccc
Q 009426 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLY 164 (535)
Q Consensus 85 ~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~ 164 (535)
+++||||||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|++..+..+.+.|.++|+|+++||+.
T Consensus 85 ~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~tsl~sK~~ 164 (522)
T TIGR02345 85 SEVGDGTTSVVILAGELLKEAKPFIEEGVHPQLIIRCYREALMLAIEKLKEIAVTIDEVKGEQREVLEKCAATALNSKLI 164 (522)
T ss_pred HHhCCCchhHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCcccccHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999999999988632222557899999999999999
Q ss_pred cchHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCC---cccccCceeEeeccccc
Q 009426 165 ESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDM---KRRAENCYILTCNVSLE 241 (535)
Q Consensus 165 ~~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~---~~~~~n~kIll~~~~Le 241 (535)
..+.++|++++++|+..+.+. .+|+++|+++++.|++.+||++++|++|++++.+|+| |+.++||+|++++++|+
T Consensus 165 ~~~~~~l~~l~~~A~~~v~~~--~~~~~~I~i~ki~Ggs~~ds~~v~Giv~~~~~~~~~~~~~~~~~~n~kIll~~~~Le 242 (522)
T TIGR02345 165 AHEKEFFSKMIVDAVLQLDID--DLDLKLIGVKKVQGGSLQDSVLVNGVAFKKTFSYAGFEQQPKKFANPKILLLNVELE 242 (522)
T ss_pred cchHHHHHHHHHHHHHHHhhc--cCChhHheEEeecCCCHHhcceecceEEecccCccccccCCceeccceEEEEecCcc
Confidence 999999999999999999652 6888999999999999999999999999999998854 89999999999999999
Q ss_pred cccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecCh
Q 009426 242 YEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKR 321 (535)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~ 321 (535)
+.+++.+..+.++++++++.+.+.|+.++.+++++|++.+ +++++++++|++.+++||.++||++++++++
T Consensus 243 ~~~~~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g---------~~vv~~~~~i~d~~~~~L~~~~I~~~~~v~~ 313 (522)
T TIGR02345 243 LKAEKDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESG---------ANVVLSKLPIGDLATQYFADHNIFCAGRVSD 313 (522)
T ss_pred cCccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CcEEEeCCCccHHHHHHHHHCCcEEEecCCH
Confidence 9999998999999999999999999999999999998876 4699999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHHH
Q 009426 322 RNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAV 401 (535)
Q Consensus 322 ~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~ 401 (535)
+++++++++|||++++++++++++++|+|+.+++..+++++|++|+++++++.|||+|||+|+.+++|++|+++||++++
T Consensus 314 ~dl~ria~~tga~ii~~~~~l~~~~LG~~~~ie~~~~~~~r~~~~~g~~~~~~~TI~lrG~t~~~l~E~~r~i~DAl~~~ 393 (522)
T TIGR02345 314 EDLKRVVKACGGSIQSTTSDLEADVLGTCALFEERQIGSERYNYFTGCPHAKTCTIILRGGAEQFIEEAERSLHDAIMIV 393 (522)
T ss_pred HHHHHHHHHhCCeEEcchhhCChhhccCCceEEEEEECCeEEEEEEcCCCCceEEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998999999999999999999999999999999
Q ss_pred HHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-CCee
Q 009426 402 KNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-GNIV 480 (535)
Q Consensus 402 ~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~~~~ 480 (535)
+++++++++|||||++|++++.+| ++++++.++++++++++|++||+.||++|++|||+|+.+++.+|+..|+. +.++
T Consensus 394 ~~~~~~~~vvpGGG~~e~~ls~~l-~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~ 472 (522)
T TIGR02345 394 RRALKARKIVAGGGAIEMELSKIL-REHSKKIDGKQQLIIEAFAKALEIIPRSLCENAGFDSIEILNKLRSRHAKGGKWY 472 (522)
T ss_pred HHHhcCCCEEeCCCHHHHHHHHHH-HHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999999999999 88888889999999999999999999999999999999999999998854 4579
Q ss_pred eEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCc
Q 009426 481 GLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 529 (535)
Q Consensus 481 Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~ 529 (535)
|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+||++|.+++
T Consensus 473 G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~ 521 (522)
T TIGR02345 473 GVDINTEDIGDNFENFVWEPLLVKKNALKAAFEAACTILSIDETIMNPK 521 (522)
T ss_pred ceeCCCCcccchhhcCceEcHHHHHHHHHHHHHHHHHHHhHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999998754
No 16
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=7.5e-103 Score=830.97 Aligned_cols=481 Identities=72% Similarity=1.108 Sum_probs=457.1
Q ss_pred CcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhhcc
Q 009426 7 NPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDI 86 (535)
Q Consensus 7 ~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~ 86 (535)
+++.+.++|.+++..|+.||..++++++|||||+||+|||+++.|+++|||||+|||++|+++||++++++++|++|+++
T Consensus 2 ~~~~~~~~~~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~a~l~~~~a~~qd~~ 81 (484)
T cd03342 2 NPKAEVLRRGQALAVNISAAKGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLSEMQIQHPTASMIARAATAQDDI 81 (484)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEECCCCCEEEeccHHHHHHhccCcCHHHHHHHHHHHHhhhH
Confidence 45667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccc
Q 009426 87 SGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYES 166 (535)
Q Consensus 87 ~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~ 166 (535)
+||||||+++|+++|++++.++++.|+||..|++||++|.+.++++|++++.+++.+ .+.+.+.++|+|++++|+.+.
T Consensus 82 ~GDGTTt~vvLa~~Ll~~a~~li~~gi~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~--~~~~~l~~va~ts~~sk~~~~ 159 (484)
T cd03342 82 TGDGTTSNVLLIGELLKQAERYIQEGVHPRIITEGFELAKNKALKFLESFKVPVEID--TDRELLLSVARTSLRTKLHAD 159 (484)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCC--CCHHHHHHHHHHHhCcccchh
Confidence 999999999999999999999999999999999999999999999999999888521 378899999999999999999
Q ss_pred hHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeecccccccccc
Q 009426 167 LADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSE 246 (535)
Q Consensus 167 ~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~~~~~ 246 (535)
+.++|++++++|+..+.++++.+|+++|++++++|++.++|++++|++|++++.+|.||++++||+|++++++|++.+++
T Consensus 160 ~~~~l~~l~~~A~~~v~~~~~~~~~~~I~i~ki~ggs~~ds~~i~G~~~~~~~~~~~m~~~~~n~~Ill~~~~le~~~~~ 239 (484)
T cd03342 160 LADQLTEIVVDAVLAIYKPDEPIDLHMVEIMQMQHKSDSDTKLIRGLVLDHGARHPDMPKRVENAYILTCNVSLEYEKTE 239 (484)
T ss_pred HHHHHHHHHHHHHHHHhhcCCccChhHeEEEEecCCChhhceEEeeEEEecCCCCCCCCccccCceEEEEeCCCCCCccc
Confidence 99999999999999997654579999999999999999999999999999999999999999999999999999998877
Q ss_pred ccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChhhHHH
Q 009426 247 VNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNMER 326 (535)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~ 326 (535)
....+.+ .+|+++++|++.++++|.++||++++++++++|+|
T Consensus 240 ~~~~~~~--------------------------------------~lvi~~~~I~~~al~~l~~~~I~av~~~~~~~l~~ 281 (484)
T cd03342 240 VNSGFFY--------------------------------------SVVINQKGIDPPSLDMLAKEGILALRRAKRRNMER 281 (484)
T ss_pred cCcEEEE--------------------------------------EEEEeCCCccHHHHHHHHHCCCeEEEeCCHHHHHH
Confidence 6543331 17789999999999999999999999999999999
Q ss_pred HHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhh
Q 009426 327 LVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIE 406 (535)
Q Consensus 327 la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~ 406 (535)
||++|||++++++++++++++|+|+.|++..+|+++|+++++++.++.|||+|||+|+.+++|++|+++||+++++++++
T Consensus 282 ia~~tGa~ii~~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~tI~lrg~t~~~l~E~er~l~DAl~~vk~~~~ 361 (484)
T cd03342 282 LTLACGGVAMNSVDDLSPECLGYAGLVYERTLGEEKYTFIEGVKNPKSCTILIKGPNDHTITQIKDAIRDGLRAVKNAIE 361 (484)
T ss_pred HHHHhCCEEecccccCChhhCcccceEEEEEECCeEEEEEECCCCCcEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-CCeeeEecC
Q 009426 407 DEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-GNIVGLNQH 485 (535)
Q Consensus 407 ~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~~~~Gid~~ 485 (535)
+|++||||||+|++++.+| ++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|+. +.++|+|+.
T Consensus 362 ~~~~vpGGGa~e~~ls~~L-~~~~~~~~~~~~~~i~~~a~Al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~ 440 (484)
T cd03342 362 DKCVVPGAGAFEVALYAHL-KEFKKSVKGKAKLGVQAFADALLVIPKTLAENSGLDVQETLVKLQDEYAEGGQVGGVDLD 440 (484)
T ss_pred CCcEEeCCCHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCceeeeCC
Confidence 9999999999999999999 88988889999999999999999999999999999999999999988854 467899999
Q ss_pred CCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcC
Q 009426 486 SGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 528 (535)
Q Consensus 486 ~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~ 528 (535)
+|++.||++.|||||+.+|+++|+.|+|+|++|||||++|+++
T Consensus 441 ~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~ID~ii~~~ 483 (484)
T cd03342 441 TGEPMDPESEGIWDNYSVKRQILHSATVIASQLLLVDEIIRAG 483 (484)
T ss_pred CCcccchhhcCcEEcHHHHHHHHHHHHHHHHHHhhhhHhhhcC
Confidence 9999999999999999999999999999999999999999875
No 17
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.2e-102 Score=838.61 Aligned_cols=504 Identities=30% Similarity=0.458 Sum_probs=481.2
Q ss_pred hhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhhcccCCC
Q 009426 11 EVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDG 90 (535)
Q Consensus 11 ~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDG 90 (535)
++..+.++++.|+.||..+++++++||||+||+|||+++.|+++|||||+|||++|+++||+++|+++++++|++++|||
T Consensus 2 ~~~~~~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hp~a~ll~~~a~~q~~~~GDG 81 (515)
T cd03338 2 DKEKPADVRLSNIQAAKAVADAIRTSLGPRGMDKMIQTGKGEVIITNDGATILKQMSVLHPAAKMLVELSKAQDIEAGDG 81 (515)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeeCCCCCEEEECcHHHHHHhCcCcCHHHHHHHHHHHHHHhHhcCC
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccchHHH
Q 009426 91 TTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQ 170 (535)
Q Consensus 91 ttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~~~~ 170 (535)
|||+++|+++|++++.+++++|+||..|++||+.|.+.++++|++++++++ ..+.+.|.++|+|++++|+.+.+.++
T Consensus 82 Ttt~vvLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~a~~v~---~~~~~~l~~va~ts~~sK~~~~~~~~ 158 (515)
T cd03338 82 TTSVVVLAGALLSACESLLKKGIHPTVISESFQIAAKKAVEILDSMSIPVD---LNDRESLIKSATTSLNSKVVSQYSSL 158 (515)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCCC---CCCHHHHHHHHHHHhccccchhhHHH
Confidence 999999999999999999999999999999999999999999999999885 34678899999999999999999999
Q ss_pred HHHHHHHhhhhhcCCc--cccCcccEEEEEecCCcccccEEEEEEEEeecCCCCC-CcccccCceeEeeccccccccccc
Q 009426 171 LTDIVVNAVLCIRKPE--EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPD-MKRRAENCYILTCNVSLEYEKSEV 247 (535)
Q Consensus 171 ls~l~~~a~~~v~~~~--~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~-~~~~~~n~kIll~~~~Le~~~~~~ 247 (535)
|++++++|+..+.+.+ +.+|+++|+++++.|++.++|++++|++|++++.++. ||+.++||++++++++|++.+++.
T Consensus 159 ls~li~~A~~~v~~~~~~~~~d~~~i~i~~~~Ggs~~ds~lv~Giv~~k~~~~~~~~p~~i~n~ki~ll~~~le~~~~~~ 238 (515)
T cd03338 159 LAPIAVDAVLKVIDPATATNVDLKDIRIVKKLGGTIEDTELVDGLVFTQKASKKAGGPTRIEKAKIGLIQFCLSPPKTDM 238 (515)
T ss_pred HHHHHHHHHHHhhcccccCcCCHHHeEEEEecCCChhhceeeeeEEEeccccCcCCCCccccCCcEEEEecccccccccc
Confidence 9999999999997643 4789999999999999999999999999999999986 499999999999999999999999
Q ss_pred cceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCC-----CHHHHHHHHHcCceEEEecChh
Q 009426 248 NAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGI-----DPLSLDLLARAGIIALRRAKRR 322 (535)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i-----~~~al~~l~~~~I~~v~~v~~~ 322 (535)
...+.++++++++.+++.|+++++..+++|++.+ +++|+++++| ++.++++|.++||+++++++++
T Consensus 239 ~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~g---------~~lvi~~~~i~~~~v~~l~~~~l~~~~I~av~~~~~~ 309 (515)
T cd03338 239 DNNIVVNDYAQMDRILREERKYILNMCKKIKKSG---------CNVLLIQKSILRDAVSDLALHFLAKLKIMVVKDIERE 309 (515)
T ss_pred CceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEECCCcccccccHHHHHHHHHCCceEEecCCHH
Confidence 9999999999999999999999999999998765 4588999987 8999999999999999999999
Q ss_pred hHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCC-CCeeEEEecCCCHHHHHHHHHHHHhHHHHH
Q 009426 323 NMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKN-PHSCTILIKGPNDHTIAQIKDAVRDGLRAV 401 (535)
Q Consensus 323 ~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~-~~~~TI~i~G~t~~~l~e~~~~l~dal~~~ 401 (535)
+|+|||++|||++++++++++++++|+|+.|++..+|+++|++++++++ ++.|||+|||+|+.+++|++|+++||++++
T Consensus 310 ~LerIa~~tGa~ii~sl~~l~~~~LG~~~~v~~~~~g~~~~~~i~~~~~~~~~~TIllrG~t~~~l~e~~r~i~Dal~~~ 389 (515)
T cd03338 310 EIEFICKTIGCKPVASIDHFTEDKLGSADLVEEVSLGDGKIVKITGVKNPGKTVTILVRGSNKLVLDEAERSLHDALCVI 389 (515)
T ss_pred HHHHHHHHHCCEEecccccCCHhhCCCCceEEEEEECCeEEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987 689999999999999999999999999999
Q ss_pred HHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-CCee
Q 009426 402 KNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-GNIV 480 (535)
Q Consensus 402 ~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~~~~ 480 (535)
++++++|++|||||++|++|+.+| ++++.+.++++++++++|++||+.||++|++|||+|+.+++.+|+..|+. +.++
T Consensus 390 ~~~~~~~~vvpGGG~~e~~ls~~l-~~~~~~~~~~~~~~~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~ 468 (515)
T cd03338 390 RCLVKKRALIPGGGAPEIEIALQL-SEWARTLTGVEQYCVRAFADALEVIPYTLAENAGLNPISIVTELRNRHAQGEKNA 468 (515)
T ss_pred HHHhhCCCEEECCCHHHHHHHHHH-HHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCcc
Confidence 999999999999999999999999 88888888999999999999999999999999999999999999999854 4679
Q ss_pred eEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhc
Q 009426 481 GLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527 (535)
Q Consensus 481 Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~ 527 (535)
|+|+.+|++.||++.|||||+.+|+++++.|+|+|++||+||++|++
T Consensus 469 G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~ID~ii~~ 515 (515)
T cd03338 469 GINVRKGAITNILEENVVQPLLVSTSAITLATETVRMILKIDDIVLA 515 (515)
T ss_pred ceeccCCCccchhhcCceecHHHHHHHHHHHHHHHHHHhccchhhcC
Confidence 99999999999999999999999999999999999999999999864
No 18
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.1e-101 Score=830.11 Aligned_cols=510 Identities=24% Similarity=0.429 Sum_probs=479.1
Q ss_pred ccCcchhhcchH-HHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhh
Q 009426 5 VLNPNAEVLNKS-AALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQ 83 (535)
Q Consensus 5 ~~~~~~~~~~~~-~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~ 83 (535)
+++++.+..+|. +++..|+.||..+++++++||||+||+|||+++.|+++|||||+||+++|+++||+++|+++++++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~akll~e~a~sq 84 (531)
T TIGR02346 5 LLKEGYRHMSGLEEAVIKNIEACKELSNITRTSLGPNGMNKMVINHLDKLFVTNDAATILRELEVQHPAAKLLVMASEMQ 84 (531)
T ss_pred cccCCcccccchHHHHHHHHHHHHHHHHHHhcccCCCcCCeEEEcCCCCEEEECcHHHHHHhccccCHHHHHHHHHHHHH
Confidence 346665677775 4999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccc-cccCCCCCCHHHHHHHHHHhhccc
Q 009426 84 DDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKT-PVVMGDEPDKEILKMVARTTLRTK 162 (535)
Q Consensus 84 ~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~-~~~~~~~~~~~~l~~ia~tsl~sk 162 (535)
++++||||||+|||+++||+++++++++|+||..|++||+.|++.++++|+++++ +++ +..+.+.+.++++|++++|
T Consensus 85 d~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~--~~~~~~~l~~i~~tsl~sK 162 (531)
T TIGR02346 85 ENEIGDGTNLVIVLAGELLDKAEELIRMGLHPSEIIKGYEQALKKAMEVLEELVVWEVE--DVRNKKELIKALKASISSK 162 (531)
T ss_pred hhhhCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCC--CCCCHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999886 664 1236788999999999999
Q ss_pred cccchHHHHHHHHHHhhhhhcCCc-cccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccccc
Q 009426 163 LYESLADQLTDIVVNAVLCIRKPE-EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLE 241 (535)
Q Consensus 163 ~~~~~~~~ls~l~~~a~~~v~~~~-~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le 241 (535)
+.+. .++|++++++|+..+.+.+ +.+++++|+++++.|++.++|++++|++|++++. .||+.++||||+++++|++
T Consensus 163 ~~~~-~~~ls~l~~~Ai~~v~~~~~~~~~~~~I~i~ki~G~s~~ds~li~Gi~~~~~~~--~~~k~i~n~kI~l~~~~l~ 239 (531)
T TIGR02346 163 QYGN-EDFLAQLVAKACSTVMPKNPENFNVDNIRVSKIMGGSISNSEVLKGMVFNREAE--GSVKRVKNAKVAVFSCPLD 239 (531)
T ss_pred cCch-HHHHHHHHHHHHHHHhhcCCCcCChhHeeEEEecCCChhhceeEeeeEEeccCC--CCceeccCCCEEEEecCcC
Confidence 8887 9999999999999987532 3689999999999999999999999999999853 4688999999999999999
Q ss_pred cccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecCh
Q 009426 242 YEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKR 321 (535)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~ 321 (535)
+.+++.++++.+++++++.++...|++++++.+++|.+.+ +++|+++++|+|.++++|.++||+++++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~l~~~~~~e~~~i~~~l~~i~~~g---------~~lvi~~~~I~d~~~~~l~~~~I~av~~~~~ 310 (531)
T TIGR02346 240 TATTETKGTVLIHNAEELLNYSKGEENQIEAYIKAIADSG---------VNVIVTGGSVGDMALHYCEKYNIMVLKIPSK 310 (531)
T ss_pred CCcccCceEEEECCHHHHHHHHHHHHHHHHHHHHHHHHcC---------CcEEEECCCcCHHHHHHHHHCCcEEEecCCH
Confidence 9999999999999999999999999999999999998766 3588999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccC-CCCeeEEEecCCCHHHHHHHHHHHHhHHHH
Q 009426 322 RNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVK-NPHSCTILIKGPNDHTIAQIKDAVRDGLRA 400 (535)
Q Consensus 322 ~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~-~~~~~TI~i~G~t~~~l~e~~~~l~dal~~ 400 (535)
.+|+|||.+|||++++++++++++++|+|+.|++..+|+++|.+++++. .+..+||+|||+|+.+++|++|+++||+++
T Consensus 311 ~~l~~Ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~~~~~~~~~~tI~lrG~t~~~l~E~er~i~DAl~~ 390 (531)
T TIGR02346 311 FELRRLCKTVGATPLARLGAPQPEEIGYVDSVYVSEIGGQKVTVFKQENGDSKISTIILRGSTKNLLDDIERAIDDGVNV 390 (531)
T ss_pred HHHHHHHHHHCCEEecccccCCHhHccccceEEEEEECCEEEEEEEccCCCCCeEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999887 588999999999999999999999999999
Q ss_pred HHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-CCe
Q 009426 401 VKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-GNI 479 (535)
Q Consensus 401 ~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~~~ 479 (535)
+++++++|++|||||++|++++.+| ++++++.++++++++++|++||+.||++|++|||+|+.+++.+|+..|+. +.+
T Consensus 391 ~k~ai~~~~vVpGGG~~e~~ls~~L-~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~ 469 (531)
T TIGR02346 391 IKALVKDNRFLPGAGATEIELALRL-KKYANKLPGLDQYAIKKFAEAFEIIPRTLAENAGLNPNEVIPKLYAAHKKGNTS 469 (531)
T ss_pred HHHHhcCCCEEECcCHHHHHHHHHH-HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCc
Confidence 9999999999999999999999999 88888888999999999999999999999999999999999999999854 467
Q ss_pred eeEecCCCC--ccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCc
Q 009426 480 VGLNQHSGD--PIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 529 (535)
Q Consensus 480 ~Gid~~~g~--~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~ 529 (535)
+|||+.+|+ +.||++.|||||+.||+++|+.|+|+|++|||||++|...+
T Consensus 470 ~Gid~~~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~ 521 (531)
T TIGR02346 470 SGIDIEAESDGVKDASEAGIYDNLATKKWAIKLATEAAVTVLRVDQIIMAKP 521 (531)
T ss_pred cceeeeCCCccccChhhcCceEcHHHHHHHHHHHHHHHHHHhhhhHhhccCC
Confidence 899999999 59999999999999999999999999999999999998775
No 19
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=8.8e-100 Score=807.44 Aligned_cols=468 Identities=33% Similarity=0.564 Sum_probs=444.7
Q ss_pred ccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhh
Q 009426 5 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQD 84 (535)
Q Consensus 5 ~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 84 (535)
+++++.++.+|.+++..|+.||.++++++++||||+|++|||+++.|+++|||||+|||++|+++||+++|+++++++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~ni~a~~~l~~~~~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~a~~q~ 83 (480)
T cd03337 4 VLNQNTKRESGRKAQLGNIQAAKTVADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPAAKSMIELSRTQD 83 (480)
T ss_pred eccCCCccccHHHHHHHHHHHHHHHHHHHhccCCCCcCceEeEcCCCCEEEeccHHHHHHhccccChHHHHHHHHHHhHH
Confidence 45777789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccc
Q 009426 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLY 164 (535)
Q Consensus 85 ~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~ 164 (535)
+++||||||+++|+++||+++.+++++|+||..|++||+.|.+.++++|++++++++ ..+.+.|.++++|++++|+.
T Consensus 84 ~~~GDGTtt~vvL~~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~---~~~~~~l~~i~~t~l~sK~~ 160 (480)
T cd03337 84 EEVGDGTTSVIILAGEILAVAEPFLERGIHPTVIIKAYRKALEDALKILEEISIPVD---VNDRAQMLKIIKSCIGTKFV 160 (480)
T ss_pred HHhCCCcchhHhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccc---cCCHHHHHHHHHHHhccCcc
Confidence 999999999999999999999999999999999999999999999999999999886 45788899999999999999
Q ss_pred cchHHHHHHHHHHhhhhhcCCc--c--ccCcc-cEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccc
Q 009426 165 ESLADQLTDIVVNAVLCIRKPE--E--AIDLF-MVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVS 239 (535)
Q Consensus 165 ~~~~~~ls~l~~~a~~~v~~~~--~--~~~~~-~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~ 239 (535)
+.|.+.|++++++|+..+.++. . .+|++ +|++++++|++.+||++++|++|++++.++.|+++++||||++++++
T Consensus 161 ~~~~~~ls~lv~~Ai~~v~~~~~~~~~~id~~~~I~i~ki~Ggs~~ds~li~Gvvi~k~~~~~~m~~~~~n~kIlll~~~ 240 (480)
T cd03337 161 SRWSDLMCNLALDAVKTVAVEENGRKKEIDIKRYAKVEKIPGGEIEDSRVLDGVMLNKDVTHPKMRRRIENPRIVLLDCP 240 (480)
T ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCcCChhhceEEEEecCCCHHhcccccceEEeccCCCCCCCcEecCCCEEEEecC
Confidence 9999999999999999997542 2 36665 49999999999999999999999999999999999999999999999
Q ss_pred cccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEec
Q 009426 240 LEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRA 319 (535)
Q Consensus 240 Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v 319 (535)
||+ +|+++++|+|.++++|.++||++++++
T Consensus 241 Le~--------------------------------------------------lvi~~k~I~d~al~~L~~~~I~~v~~v 270 (480)
T cd03337 241 LEY--------------------------------------------------LVITEKGVSDLAQHYLVKAGITALRRV 270 (480)
T ss_pred cce--------------------------------------------------EEEeCCCccHHHHHHHHHCCcEEEEeC
Confidence 853 567899999999999999999999999
Q ss_pred ChhhHHHHHHHhCCEEecccCCCCCCCCcc-cceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHH
Q 009426 320 KRRNMERLVLACGGEAVNSVDDLTPGCLGW-AGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGL 398 (535)
Q Consensus 320 ~~~~l~~la~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal 398 (535)
++++|+|||++|||++++++++++++++|+ |+.+++..+++++|+++++|++++.|||+|||+|+.+++|++|+++||+
T Consensus 271 ~~~~L~rIa~~tGa~ii~~~~~l~~~~LG~~~~~~~~~~~~~~~~~~i~~~~~~~~~TIllrG~t~~~l~e~er~l~DAl 350 (480)
T cd03337 271 RKTDNNRIARACGATIVNRPEELTESDVGTGAGLFEVKKIGDEYFTFITECKDPKACTILLRGASKDVLNEVERNLQDAM 350 (480)
T ss_pred CHHHHHHHHHHHCCEEecchhhCCHHHcCCcccEEEEEEeCCeEEEEEEcCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 6777888889999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC--
Q 009426 399 RAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-- 476 (535)
Q Consensus 399 ~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-- 476 (535)
+++++++++|++|||||++|++++.+| ++++.+.++++++++++|++||+.||++|++|||+|+.+++.+|++.|+.
T Consensus 351 ~v~~~~~~~~~~vpGGGa~E~~ls~~l-~~~~~~~~~~~~~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~ 429 (480)
T cd03337 351 AVARNIILNPKLVPGGGATEMAVSHAL-SEKAKSIEGVEQWPYKAVASALEVIPRTLAQNCGANVIRTLTELRAKHAQGE 429 (480)
T ss_pred HHHHHHhcCCCEEeCCCHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccC
Confidence 999999999999999999999999999 88888889999999999999999999999999999999999999999954
Q ss_pred CCeeeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhh
Q 009426 477 GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIR 526 (535)
Q Consensus 477 ~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~ 526 (535)
+.++|+|+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|.
T Consensus 430 ~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 479 (480)
T cd03337 430 NSTWGIDGETGDIVDMKELGIWDPLAVKAQTYKTAIEAACMLLRIDDIVS 479 (480)
T ss_pred CCeECeeccCCCcccchhccCeEcHHHHHHHHHHHHHHHHHHhhhhheec
Confidence 36799999999999999999999999999999999999999999999874
No 20
>KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-99 Score=721.60 Aligned_cols=520 Identities=29% Similarity=0.462 Sum_probs=491.8
Q ss_pred Cc-ccccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCC--CCeEEecChHHHhhhccccChHHHHHH
Q 009426 1 MS-LRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGA--GDIKLTKDGNTLLKEMQIQNPTAIMIA 77 (535)
Q Consensus 1 ~~-~~~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~--g~~~iTnDg~tIl~~l~~~hP~a~ll~ 77 (535)
|+ +++++.+.++++|+.|+.+.|.++..+++++||||||+||+||++... |.+.+||||+|||+++.+++|+||+++
T Consensus 1 m~p~~i~~~~~~eErge~ArlssfvGaiaigDlvKsTLGPKGMdKiL~s~~~~~~v~VTNDGAtILksi~vDnpaAkvLv 80 (527)
T KOG0363|consen 1 MNPVQIFKDGATEERGENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSTGRAGTVMVTNDGATILKSIGVDNPAAKVLV 80 (527)
T ss_pred CChhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhccCcchHHHHHhccCCCCceEEecchHHHHHhcCCCCchhhhee
Confidence 55 678899999999999999999999999999999999999999999753 789999999999999999999999999
Q ss_pred HHHHhhhcccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHH
Q 009426 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVART 157 (535)
Q Consensus 78 ~~~~~~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~t 157 (535)
+.++-||+++|||||||+||+++||++|.+|+.+.+||+.|+.||+.|.+.|++.|.+.++.........+++|.++|+|
T Consensus 81 ~~S~vQD~EvGDGTTSV~vlaaeLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dns~~~~kfr~DLl~iarT 160 (527)
T KOG0363|consen 81 DISKVQDDEVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDNSSDKEKFREDLLKIART 160 (527)
T ss_pred ccccccccccCCCceehHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988876543333457899999999
Q ss_pred hhccccccchHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeec
Q 009426 158 TLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCN 237 (535)
Q Consensus 158 sl~sk~~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~ 237 (535)
.|+||+.++..++|++++++|+++++. +-+++.|+|+|.+||.++||++-+|+++++.+- -+.|++++|++|++.|
T Consensus 161 TL~SKiLsq~kehFaelavdAV~rLkG---s~nL~~IqIIK~~Gg~l~dSfLDeGFlL~K~ig-v~qpkriena~iLIAN 236 (527)
T KOG0363|consen 161 TLSSKILSQDKEHFAELAVDAVLRLKG---STNLEAIQIIKKLGGKLEDSFLDEGFLLDKKIG-VNQPKRIENAKILIAN 236 (527)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcC---CCCccceeeehhcCCccccccccccceeccccC-CCCcccccccceEEec
Confidence 999999999999999999999999964 568889999999999999999999999997653 3558999999999999
Q ss_pred ccccccccccc-ceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEE
Q 009426 238 VSLEYEKSEVN-AGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIAL 316 (535)
Q Consensus 238 ~~Le~~~~~~~-~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v 316 (535)
.+++.+|.+.+ +.+.+.+...+.++...|++.+++++++|...+ .++.++.+-|.++..++|...||+++
T Consensus 237 T~mDtDKvKvfGarvrVds~~klaelE~AEkeKmK~KV~kI~~hg---------iN~FiNRQLiYnyPeqLf~dagi~aI 307 (527)
T KOG0363|consen 237 TPMDTDKVKVFGARVRVDSTAKLAELEKAEKEKMKEKVEKILKHG---------INVFINRQLIYNYPEQLFADAGIMAI 307 (527)
T ss_pred CCCcccceeeecceEeecchhHHHHHHHHHHHHHHHHHHHHHhcC---------CcEEeehhHhhcCHHHHHhhcCccee
Confidence 99999998865 678999999999999999999999999998876 35889999999999999999999999
Q ss_pred EecChhhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHh
Q 009426 317 RRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRD 396 (535)
Q Consensus 317 ~~v~~~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~d 396 (535)
...+.+-+|||+..||+.++++|++++..++|.|+.+++..+|+++++.|.|++....|||++||+|++++||.+|++||
T Consensus 308 EHADFdGiERLalvtGGeI~STFd~p~~~klG~C~~IeeimiGed~li~FSGv~~GeActIVlrGat~q~LDEaeRslHD 387 (527)
T KOG0363|consen 308 EHADFDGIERLALVTGGEIVSTFDNPELVKLGECDLIEEIMIGEDKLIKFSGVKLGEACTIVLRGATQQILDEAERSLHD 387 (527)
T ss_pred ecccchhHHHHhhcccceeeeccCCcchhccccchhhHHHhcCccceeeecccccccceEEEEecccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999989999999999999999999999999
Q ss_pred HHHHHHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC
Q 009426 397 GLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR 476 (535)
Q Consensus 397 al~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~ 476 (535)
|||++....++.+++.||||.||.++..+ .+++...++++..++++|++||..+|.+|+.|+|+|+.+++.+||+.|.+
T Consensus 388 ALcVLaqtv~esrvv~GgG~sEm~Ma~av-~~~A~~~pGkea~AieAfarAL~qlPtiiaDNaG~dsaelva~Lra~h~~ 466 (527)
T KOG0363|consen 388 ALCVLAQTVKESRVVLGGGCSEMLMAKAV-DKEAQETPGKEALAIEAFARALRQLPTIIADNAGYDSAELVAQLRAEHYN 466 (527)
T ss_pred HHHHHHHHhccceeeecCCcHHHHHHHHH-HHHHhhCCchhhHHHHHHHHHHHhcchhhhccCCCCHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999965
Q ss_pred -CCeeeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCccCCCC
Q 009426 477 -GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRKP 534 (535)
Q Consensus 477 -~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~~~~~~ 534 (535)
+..+|+|..+|++.||.+.||+|++.+|.+++.+|.|++.+|||+|.||.+.|..|++
T Consensus 467 g~~t~Gld~~~G~i~dm~~~Gi~es~~vK~~vv~sasEaae~ilrvD~Iik~aPR~r~~ 525 (527)
T KOG0363|consen 467 GRTTMGLDVRNGEIGDMRELGIVESLKVKQAVVSSASEAAEMILRVDNIIKAAPRERER 525 (527)
T ss_pred CCcccccccccCchhhHHHhhhHHHHHHHHHHHhhhHHHHHHHHhhhhhhhcCCccccc
Confidence 4789999999999999999999999999999999999999999999999999988765
No 21
>KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-100 Score=728.25 Aligned_cols=505 Identities=29% Similarity=0.471 Sum_probs=479.5
Q ss_pred hhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhhcccCC
Q 009426 10 AEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGD 89 (535)
Q Consensus 10 ~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 89 (535)
.+.++..+.+.+||+|++++++.++|||||+||||||+.+.|+++|||||+|||+.|.+-||+++|+++++..||.++||
T Consensus 19 ~d~ekp~~vR~sni~Aa~avadairTSLGPkGmDKMIq~~~gev~iTNDGaTILk~m~vlhP~akmLvelS~aQD~eaGD 98 (534)
T KOG0358|consen 19 KDKEKPEQVRFSNIQAARAVADAIRTSLGPKGMDKMIQTGKGEVIITNDGATILKQMNVLHPAAKMLVELSAAQDSEAGD 98 (534)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhccCccchhhHhhcCCCcEEEecChHHHHHHHhhhChHHHHHHHhhhhccccccC
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccchHH
Q 009426 90 GTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLAD 169 (535)
Q Consensus 90 Gttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~~~ 169 (535)
||||+|+|+++||+.+.+|+++|+||..|.+.|+.|.+.++++|++++.|++ ..|++.|.+-|.|+|+||+.++++.
T Consensus 99 GTTsVVilaGaLL~~~~~LL~kgiHPtvIsdsfq~a~~~~v~il~~m~~~ve---lsdre~Li~~atTsLnSKvvSq~s~ 175 (534)
T KOG0358|consen 99 GTTSVVILAGALLEAAEKLLQKGIHPTVISDSFQSAAKKAVDILDEMSVPVE---LSDRESLIKSATTSLNSKVVSQYSS 175 (534)
T ss_pred CceEEEEehhhHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHHhcCCCcc---cCcHHHHHHHHHhHhhHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999999999987 6688899999999999999999999
Q ss_pred HHHHHHHHhhhhhcCCc--cccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccccccccccc
Q 009426 170 QLTDIVVNAVLCIRKPE--EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEV 247 (535)
Q Consensus 170 ~ls~l~~~a~~~v~~~~--~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~~~~~~ 247 (535)
++++++++|++.+..+. .+.|+.+|+++|..||.++|+++++|++|++......-|.+++++||-++.+.+.++|+++
T Consensus 176 llapmAVdAV~kv~dp~~~~nvdlkdIkivkklGgtvdDte~i~glvl~~~~~~~~gptriekAkIglIQF~iS~PKtdm 255 (534)
T KOG0358|consen 176 LLAPMAVDAVLKVIDPENATNVDLKDIKIVKKLGGTVDDTELIKGLVLTQKASKSAGPTRIEKAKIGLIQFQISPPKTDM 255 (534)
T ss_pred ccchHHHHHHHhccCcccccccchhhhhhHHhhCCccchhhhhcceEEeeecccCCCcchhhhceeeEEEEEecCCCCCc
Confidence 99999999999987642 4789999999999999999999999999998766555788999999999999999999999
Q ss_pred cceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCC-----CHHHHHHHHHcCceEEEecChh
Q 009426 248 NAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGI-----DPLSLDLLARAGIIALRRAKRR 322 (535)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i-----~~~al~~l~~~~I~~v~~v~~~ 322 (535)
..++.++++.|++..+..|+.|+.+.+++|.+.+ | ++++.||+| +|.++|||++-+|+|++.+.++
T Consensus 256 en~iiv~DyaqMdrilkeER~YiL~mcKkIKk~g---c------nvLliQKSILRdavsDLAlHfL~klkimvikdieRe 326 (534)
T KOG0358|consen 256 ENQIIVNDYAQMDRILKEERQYILNMCKKIKKAG---C------NVLLIQKSILRDAVSDLALHFLAKLKIMVIKDIERE 326 (534)
T ss_pred ccceEecCHHHHHHHHHHHHHHHHHHHHHHHhcC---C------eEEEEeHHHHHHHHHHHHHHHHHhCcEEEEccccHh
Confidence 9999999999999999999999999999997655 7 488889886 8999999999999999999999
Q ss_pred hHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEE-CceEEEEEEccCC-CCeeEEEecCCCHHHHHHHHHHHHhHHHH
Q 009426 323 NMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVL-GEEKYTFVENVKN-PHSCTILIKGPNDHTIAQIKDAVRDGLRA 400 (535)
Q Consensus 323 ~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i-~~~~~~~~~~~~~-~~~~TI~i~G~t~~~l~e~~~~l~dal~~ 400 (535)
|+|.+++.+|+.|+.+++.++++.+|+++.++|... |+.+++.+.++.+ .+.+||++||+++..++|.+|++|||||+
T Consensus 327 diefick~l~c~Pia~id~f~~d~Lg~adlveE~~~~G~gkivk~tg~~n~g~tvsil~RGsn~lvleEaeRSlhDALCV 406 (534)
T KOG0358|consen 327 DIEFICKTLGCKPIADIDHFTADKLGSADLVEETDSSGEGKIVKITGIQNAGRTVSILLRGSNKLVLEEAERSLHDALCV 406 (534)
T ss_pred hHHHHHhhcCCeecchhhhcChhhcCcchhhhhcccCCCccEEEEEEeecCCCceEEEEecCchhhhHHHhhhhhhhhHH
Confidence 999999999999999999999999999999998744 4558888888877 68899999999999999999999999999
Q ss_pred HHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCC-Ce
Q 009426 401 VKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRG-NI 479 (535)
Q Consensus 401 ~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~-~~ 479 (535)
+|++++.+.++||||+.|+.++..| .+++++..+.+.|++++||+|||.||.+|++|||++|+.++++||..|.++ .+
T Consensus 407 irCLvk~r~li~GGGapEieia~~L-~~~a~t~eG~~~yc~rafA~AlEvIP~tLAeNAGLnpI~~VtELRn~haqge~~ 485 (534)
T KOG0358|consen 407 IRCLVKKRALIAGGGAPEIEIALRL-SALARTLEGVEAYCWRAFADALEVIPYTLAENAGLNPIATVTELRNRHAQGEKN 485 (534)
T ss_pred HHhhhhccceecCCCCcchHHHHHH-HHHHhhhccchhHHHHHHHHHHhcccHhHHhhCCCChhhHHHHHHHHHhcCCcc
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999999655 89
Q ss_pred eeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhc
Q 009426 480 VGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527 (535)
Q Consensus 480 ~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~ 527 (535)
+||+++.|.+.||.+..|+.|+.|-.++++.|+|++.+||+||+|+.+
T Consensus 486 aGInVRkg~~tni~ee~VvQPllVs~SaitlA~Etvr~ILKIDDIv~a 533 (534)
T KOG0358|consen 486 AGINVRKGGITNILEENVVQPLLVSISAITLATETVRSILKIDDIVNA 533 (534)
T ss_pred cceeeecccchhhHHHhcccceeeeHHHHHHHHHHHHHHhhhhhhccc
Confidence 999999999999999999999999999999999999999999999875
No 22
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=5.8e-96 Score=778.89 Aligned_cols=461 Identities=41% Similarity=0.638 Sum_probs=442.6
Q ss_pred hcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhhcccCCCh
Q 009426 12 VLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGT 91 (535)
Q Consensus 12 ~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGt 91 (535)
...+.+++..|++||..+++++++||||+|++|||+++.|+++|||||+||+++|+++||+++++++++++|++++||||
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~hp~a~ll~~~~~~~~~~~GDGT 82 (464)
T cd00309 3 REFGEEARLSNINAAKALADAVKTTLGPKGMDKMLVDSLGDPTITNDGATILKEIEVEHPAAKLLVEVAKSQDDEVGDGT 82 (464)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcccCCCcCcEEEEcCCCCeEEEccHHHHHHhccCcCHHHHHHHHHHHHHHhHhCCch
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccchHHHH
Q 009426 92 TSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQL 171 (535)
Q Consensus 92 tt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~~~~l 171 (535)
||+++|+++|++++.+++++|+||..|++||+.|++.++++|++++++++ ..+.+.+.++++|++++|+.+.+.++|
T Consensus 83 tt~viL~~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~---~~~~~~l~~ia~tsl~sK~~~~~~~~l 159 (464)
T cd00309 83 TTVVVLAGELLKEAEKLLAAGIHPTEIIRGYEKAVEKALEILKEIAVPID---VEDREELLKVATTSLNSKLVSGGDDFL 159 (464)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCccC---CCCHHHHHHHhHhcccccccccchHHH
Confidence 99999999999999999999999999999999999999999999999964 448889999999999999999999999
Q ss_pred HHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccccccccccccceE
Q 009426 172 TDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGF 251 (535)
Q Consensus 172 s~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~~~~~~~~~~ 251 (535)
++++++|+..+.+....++.+.|+|++++|++..||++++|++|++++.+|.|++.++||+|++++++|++
T Consensus 160 ~~l~~~Ai~~v~~~~~~~~~~~I~i~k~~gg~~~ds~li~Gi~~~~~~~~~~m~~~~~n~~Ili~~~~Le~--------- 230 (464)
T cd00309 160 GELVVDAVLKVGKENGDVDLGVIRVEKKKGGSLEDSELVVGMVFDKGYLSPYMPKRLENAKILLLDCKLEY--------- 230 (464)
T ss_pred HHHHHHHHHHhccccCccccceEEEEecCCCCcccceeeeeEEEecCCCCCCCceeecCceEEEEecCcce---------
Confidence 99999999999765446778899999999999999999999999999999999999999999999999953
Q ss_pred EEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChhhHHHHHHHh
Q 009426 252 FYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNMERLVLAC 331 (535)
Q Consensus 252 ~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~la~~t 331 (535)
+|+++++|++.++++|.++||++++++++++|+|||++|
T Consensus 231 -----------------------------------------lIi~~~~I~~~al~~L~~~~I~~v~~~~~~~L~~Ia~~t 269 (464)
T cd00309 231 -----------------------------------------VVIAEKGIDDEALHYLAKLGIMAVRRVRKEDLERIAKAT 269 (464)
T ss_pred -----------------------------------------EEecCCCcCHHHHHHHHHCCeEEEEeCCHHHHHHHHHHh
Confidence 678999999999999999999999999999999999999
Q ss_pred CCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccc
Q 009426 332 GGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVV 411 (535)
Q Consensus 332 Ga~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vv 411 (535)
||++++++++++++++|+|+.+++..+|+++|++|++++.++.|||+|||+|+.+++|++|+++||++++++++++|++|
T Consensus 270 Ga~ii~~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrG~t~~~l~e~~r~i~dal~~~~~~~~~~~~v 349 (464)
T cd00309 270 GATIVSRLEDLTPEDLGTAGLVEETKIGDEKYTFIEGCKGGKVATILLRGATEVELDEAERSLHDALCAVRAAVEDGGIV 349 (464)
T ss_pred CCEEecccccCCcccCccccEEEEEEEcCeeEEEEEecCCCCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-CCeeeEecCCCCcc
Q 009426 412 LGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-GNIVGLNQHSGDPI 490 (535)
Q Consensus 412 pGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~~~~Gid~~~g~~~ 490 (535)
||||++|++++++| ++++.+.++++++++++|++||+.||++|++|||+|+.+++.+|+..|+. +.++|+|..+|++.
T Consensus 350 pGGGa~E~~ls~~L-~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~g~d~~~~~~~ 428 (464)
T cd00309 350 PGGGAAEIELSKAL-EELAKTLPGKEQLGIEAFADALEVIPRTLAENAGLDPIEVVTKLRAKHAEGGGNAGGDVETGEIV 428 (464)
T ss_pred cCCcHHHHHHHHHH-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhccCCCeeEECCCCcEe
Confidence 99999999999999 88888889999999999999999999999999999999999999998854 46789999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhh
Q 009426 491 DPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIR 526 (535)
Q Consensus 491 d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~ 526 (535)
||++.|||||+.+|+++++.|+|+|++||+||++|.
T Consensus 429 d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 464 (464)
T cd00309 429 DMKEAGIIDPLKVKRQALKSATEAASLILTIDDIIV 464 (464)
T ss_pred ehhhccCeecHHHHHHHHHHHHHHHHHHHhHHHHhC
Confidence 999999999999999999999999999999999984
No 23
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1e-95 Score=774.68 Aligned_cols=462 Identities=26% Similarity=0.456 Sum_probs=434.3
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhhcccCCChh
Q 009426 13 LNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTT 92 (535)
Q Consensus 13 ~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt 92 (535)
..+.+++..|+.||.++++++++||||+|++|||+++.|+++|||||+||+++|+++||+++|+++++++|++++|||||
T Consensus 4 ~~~~~~~~~ni~a~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~a~~~~~~~GDGTT 83 (472)
T cd03341 4 SGLEEAVLRNIEACKELSQITRTSYGPNGMNKMVINHLEKLFVTSDAATILRELEVQHPAAKLLVMASQMQEEEIGDGTN 83 (472)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEEcCCCCEEEeCcHHHHHHhccccCHHHHHHHHHHHHHhhhhCCChh
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhcccc-ccCCCCCCHHHHHHHHHHhhccccccchHHHH
Q 009426 93 STVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP-VVMGDEPDKEILKMVARTTLRTKLYESLADQL 171 (535)
Q Consensus 93 t~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~-~~~~~~~~~~~l~~ia~tsl~sk~~~~~~~~l 171 (535)
|+++|+++||+++.+++++|+||+.|++||+.|++.++++|++++++ ++ +..+.+.+.++++|++++|..+ +.++|
T Consensus 84 t~vvL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~--~~~~~~~l~~i~~t~l~sk~~~-~~~~l 160 (472)
T cd03341 84 LVVVLAGELLEKAEELLRMGLHPSEIIEGYEKALKKALEILEELVVYKIE--DLRNKEEVSKALKTAIASKQYG-NEDFL 160 (472)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccccC--CccCHHHHHHHHHHHhcccccc-hHHHH
Confidence 99999999999999999999999999999999999999999999876 42 1236778999999999999876 68999
Q ss_pred HHHHHHhhhhhcCCc-cccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccccccccccccce
Q 009426 172 TDIVVNAVLCIRKPE-EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAG 250 (535)
Q Consensus 172 s~l~~~a~~~v~~~~-~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~~~~~~~~~ 250 (535)
++++++|+..+.+.+ +.+++++|+|++++|++.+||++++|++|++.+. .+++.++||+|++++++|++
T Consensus 161 ~~l~~~a~~~~~~~~~~~~~~~~i~i~ki~Gg~~~ds~lv~Giv~~~~~~--~~~~~~~n~~Ili~~~~Le~-------- 230 (472)
T cd03341 161 SPLVAEACISVLPENIGNFNVDNIRVVKILGGSLEDSKVVRGMVFKREPE--GSVKRVKKAKVAVFSCPFDI-------- 230 (472)
T ss_pred HHHHHHHHHHHhhccCCcCChhHeEEEEecCCCcccceEEeeEEEccccC--CCceeccCCcEEEEeccccC--------
Confidence 999999999987542 4789999999999999999999999999987653 34588999999999999964
Q ss_pred EEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChhhHHHHHHH
Q 009426 251 FFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNMERLVLA 330 (535)
Q Consensus 251 ~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~la~~ 330 (535)
+ +++|+++++|||.++++|+++||++++++++++|+|||++
T Consensus 231 ------------------------------g---------~~lvi~~~~I~d~al~~l~~~~I~av~~~~~~~Le~Ia~~ 271 (472)
T cd03341 231 ------------------------------G---------VNVIVAGGSVGDLALHYCNKYGIMVIKINSKFELRRLCRT 271 (472)
T ss_pred ------------------------------C---------CeEEEECCCCCHHHHHHHHHCCeEEEEeCCHHHHHHHHHH
Confidence 2 3589999999999999999999999999999999999999
Q ss_pred hCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCC-CCeeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCc
Q 009426 331 CGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKN-PHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEA 409 (535)
Q Consensus 331 tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~-~~~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~ 409 (535)
|||++++++++++++++|+|+.|++..+|+++|++|++++. ++.|||+|||+|+.+++|++|+++||++++++++++|+
T Consensus 272 tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~DAl~~~~~ai~~~~ 351 (472)
T cd03341 272 VGATPLPRLGAPTPEEIGYCDSVYVEEIGDTKVVVFRQNKEDSKIATIVLRGATQNILDDVERAIDDGVNVFKSLTKDGR 351 (472)
T ss_pred hCCEEecccccCCHhHCCCceEEEEEEECCeeEEEEEccCCCCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999987 88999999999999999999999999999999999999
Q ss_pred cccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcC-CCeeeEecCCC-
Q 009426 410 VVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR-GNIVGLNQHSG- 487 (535)
Q Consensus 410 vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~-~~~~Gid~~~g- 487 (535)
+|||||++|++++.+| ++++.+.++++++++++|++||+.||++|++|||+|+.+++.+|+..|+. +.++|||+.+|
T Consensus 352 vVpGGG~~e~~ls~~l-~~~~~~~~~~~~~~~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~Gid~~~g~ 430 (472)
T cd03341 352 FVPGAGATEIELAKKL-KEYGEKTPGLEQYAIKKFAEAFEVVPRTLAENAGLDATEVLSELYAAHQKGNKSAGVDIESGD 430 (472)
T ss_pred EEeCcCHHHHHHHHHH-HHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCeeeeeccCCC
Confidence 9999999999999999 88887788999999999999999999999999999999999999998844 46799999999
Q ss_pred -CccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhc
Q 009426 488 -DPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 527 (535)
Q Consensus 488 -~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~ 527 (535)
++.||++.|||||+.||+++|+.|+|+|++|||||++|.+
T Consensus 431 ~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~ 471 (472)
T cd03341 431 EGTKDAKEAGIFDHLATKKWAIKLATEAAVTVLRVDQIIMA 471 (472)
T ss_pred CCccChhhccceecHHHHHHHHHHHHHHHHHHhhhcceeec
Confidence 9999999999999999999999999999999999999865
No 24
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-95 Score=767.78 Aligned_cols=505 Identities=34% Similarity=0.494 Sum_probs=473.2
Q ss_pred chhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhhcccC
Q 009426 9 NAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISG 88 (535)
Q Consensus 9 ~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 88 (535)
+.+...|.+|+..|+.|+..+++++|+||||+||+|||+++.|+++|||||+||+++|+++||+|+|++++|++|++++|
T Consensus 3 ~~~~~~~~~a~~~~~~~~~~la~~vkttLGPkG~~k~l~~~~g~~~iTnDG~tIlkeielehp~akll~eva~~qd~e~G 82 (524)
T COG0459 3 GKERKFGEDARRSNIRAARALADAVKTTLGPKGRNKMLVDSGGDITITNDGVTILKEIELEHPGAKLLVEVAKKQDDEAG 82 (524)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHhccCCCcCceEEecCCCCEEEecCcceehhhhhccCchhHHHHHHHHHHHHHhc
Confidence 45678899999999999999999999999999999999999779999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccchH
Q 009426 89 DGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLA 168 (535)
Q Consensus 89 DGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~~ 168 (535)
|||||++||+++||+++.+++++|+||+.|++||++|.+.+.++|++.++++. ..+.+. +++.|++++|..+..
T Consensus 83 DGTTtavVLa~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~---~~~~~~--~~~~t~v~sk~~~~~- 156 (524)
T COG0459 83 DGTTTAVVLAGALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVS---DSEEEL--KIAITSVASKSANSD- 156 (524)
T ss_pred CchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCC---cchhhh--hhhhheeeeeeccCh-
Confidence 99999999999999999999999999999999999999999999999999987 212222 889999999988777
Q ss_pred HHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecC-CCCCCc-ccccCceeEeecccccccccc
Q 009426 169 DQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGS-RHPDMK-RRAENCYILTCNVSLEYEKSE 246 (535)
Q Consensus 169 ~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~-~~~~~~-~~~~n~kIll~~~~Le~~~~~ 246 (535)
++|++++++|+.++...+. |++.|.+++..|++.+++++++|++|++++ .+++|| +.++||+|+++|++|+..+++
T Consensus 157 ~~i~~lv~~Av~~v~~~~~--d~~~i~~vk~~gg~~~e~~vveG~~~dkg~~s~~~~~~~~~e~~~Ili~d~~l~~~k~~ 234 (524)
T COG0459 157 EEIGELVVEAVEKVGKEQS--DLDGIIIVKESGGSETELEVVEGMVFDKGYLSPYFMPDKRLENPKILLLDKKLEIKKPE 234 (524)
T ss_pred HHHHHHHHHHHHHhccccc--ccCCeEEEEecCCCccceEEEeeEEecCCccCCCCCCccccccceEEEEcccccccccc
Confidence 9999999999999976533 889999999999999999999999999955 556889 899999999999999999999
Q ss_pred ccceEEEeCHHHHHHHHHHHH-HHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChhhH-
Q 009426 247 VNAGFFYSNAEQREAMVAAER-RQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNM- 324 (535)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~E~-~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~~l- 324 (535)
.+.++.++++.++..+.+.|+ +.+...+++++..+. +.+++++++|+|.++++|.+.+|++++++.++++
T Consensus 235 l~~e~~i~~~~~l~~i~e~ee~e~l~~~v~ni~~~g~--------~~vvv~~~gi~D~~~~~L~d~~Ilt~~~v~~~dl~ 306 (524)
T COG0459 235 LPLEIVISSGKPLLIIAEDEEGEALATLVVNILRGGA--------NVVVVKAPGIDDLAKAYLEDIAILTGRRVKKEDLG 306 (524)
T ss_pred CcceeEecCccHHHHHHHHHHHHHHHHHHHHHHhcCC--------CEEEEECCCCcHHHHHHHHhhcceecceecchhhH
Confidence 999999999999999999999 999999999987652 3489999999999999999999999999999999
Q ss_pred HHHHHHhCCEEecccCCCCCCCCcc--cceEEEEEECceEEEEEEccCC--CCeeEEEecCCCHHHHHHHHHHHHhHHHH
Q 009426 325 ERLVLACGGEAVNSVDDLTPGCLGW--AGLVYEHVLGEEKYTFVENVKN--PHSCTILIKGPNDHTIAQIKDAVRDGLRA 400 (535)
Q Consensus 325 ~~la~~tGa~ii~~~~~l~~~~lG~--~~~v~~~~i~~~~~~~~~~~~~--~~~~TI~i~G~t~~~l~e~~~~l~dal~~ 400 (535)
++|+.++||++++.++++++..+|. |..+++..+++..+.+|+++.. ++.|||++||+|+.+++|++|+++|||++
T Consensus 307 ~~l~~~~ga~~v~~~~d~t~~~~G~~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~tI~vrgate~~ldE~er~i~DAL~~ 386 (524)
T COG0459 307 ERLAKLGGAKIVSVLKDLTTIVLGEGAAGLVEETKTGDYDMEKLQERKAKAGGVATILVRGATEVELDEKERRIEDALNV 386 (524)
T ss_pred HHHHHccCceEEeecccCceeecCccccceEEEeeccchhhhhhhhhhhcCCCeEEEEECCccHhHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999 9999999999999999999875 78999999999999999999999999999
Q ss_pred HHHHhhcCccccCCchhHHHHHHHHHHHHhcccch-hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCe
Q 009426 401 VKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEG-RAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNI 479 (535)
Q Consensus 401 ~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~-~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~ 479 (535)
+++++++|++|||||++|++++.+| ++++.+.++ ++|+++++|++||+.||++|++|||+||.+++.+|++.|. .++
T Consensus 387 ~~~ave~g~iV~GGGa~e~~~a~~L-~~~~~~~~g~~e~~~i~~~a~Ale~ip~~La~NaG~d~~~v~~~L~~~~~-~~~ 464 (524)
T COG0459 387 VRAAVEEGKIVPGGGAAEIEAALRL-REYAMTVEGGDEQLGIEAFARALEAPPRQLAENAGLDPIEVLSKLRSAHA-TTN 464 (524)
T ss_pred HHHHHhcCCeEeCCCHHHHHHHHHH-HhhhccCCchHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccc-CCc
Confidence 9999999999999999999999999 887545555 9999999999999999999999999999999999999874 345
Q ss_pred eeEecCCCCc-cccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCccC
Q 009426 480 VGLNQHSGDP-IDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNM 531 (535)
Q Consensus 480 ~Gid~~~g~~-~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~~~ 531 (535)
+|||+.+|++ .||++.|||||+.||+++|++|+|+|++||++|++|...+..
T Consensus 465 ~G~d~~~~~~~~dm~~~GI~dP~~v~~~al~~A~e~a~llL~~d~iI~~~~~~ 517 (524)
T COG0459 465 YGIDAFTGEYEDDMIEAGIIDPLKVKRSALKNAAEAAGLLLTIDDIIAAKPEE 517 (524)
T ss_pred cceeccCCccccchHhccCcChHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Confidence 9999999999 779999999999999999999999999999999999998854
No 25
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=100.00 E-value=2.9e-93 Score=766.03 Aligned_cols=482 Identities=35% Similarity=0.611 Sum_probs=460.6
Q ss_pred HHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhhcccCCChhHHHHHHHHHHHHHHHH
Q 009426 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERC 108 (535)
Q Consensus 29 l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGttt~vvLa~~Ll~~~~~l 108 (535)
|++++++||||+|++|||+++.|++++||||+||+++|+++||+++++++++++|++++||||||+++|+++|++++.++
T Consensus 1 l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~~P~~~ll~~~~~~~~~~~GDGtts~vlL~~~ll~~~~~l 80 (485)
T PF00118_consen 1 LADIVKSSLGPKGRDKLIVNDSGKIIITNDGATILKSLKINHPIAKLLVEASKSQDEEVGDGTTSVVLLACELLRNALKL 80 (485)
T ss_dssp HHHHHGCCSSTTS-EEEEEESSSSEEEESSHHHHHHHSTBSSHHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhcccCcCCCCCeEEEEcCCCCeEEEechhHHHHHhhhccchhhhHHHhHHHHHhhhccccceeeecccchhhhhhhh
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCH-HHHHHHHHHhhccccccchHHHHHHHHHHhhhhhcCCcc
Q 009426 109 IDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDK-EILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEE 187 (535)
Q Consensus 109 i~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~-~~l~~ia~tsl~sk~~~~~~~~ls~l~~~a~~~v~~~~~ 187 (535)
+++|+||..|++||+.|++.+++.|++++++++ +. +.++++++|++++|+.+.+.++|++++++|+..+..
T Consensus 81 i~~gi~p~~I~~~~~~~~~~~~~~l~~~s~~~~-----~~~~~l~~i~~t~l~~k~~~~~~~~l~~li~~a~~~~~~--- 152 (485)
T PF00118_consen 81 IKKGIHPQEIIRGLQEALKIILEYLEKISIPIN-----NDDESLLNIAKTSLNSKISSSWSDHLSKLIVDAIKSIKS--- 152 (485)
T ss_dssp HHTTS-HHHHHHHHHHHHHHHHHHHHHHSEEST-----STSHHHHHHHHHHHTTSCGGGCHHHHHHHHHHHHHHHTT---
T ss_pred hhccccccchhhhhhhhhhhhhhhhhhhhcccc-----ccchhhhhhhcccccccccccchhhhhhhHHHHHHhhcc---
Confidence 999999999999999999999999999999987 33 899999999999999999999999999999944432
Q ss_pred ccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccccccccccccceEEEeCHHHHHHHHHHHH
Q 009426 188 AIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAER 267 (535)
Q Consensus 188 ~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~~~~~~~~~~~~~~~~~~~~~~~~E~ 267 (535)
.+|+++++++++.|++.+||++++|+++++++.+++|+++++||+|++++++|++.++ .++++.++++++++.+.+.|+
T Consensus 153 ~~~~~~i~i~~i~g~~~~dS~li~Giv~~~~~~~~~~~~~~~~~~Ill~~~~L~~~~~-~~~~~~~~~~~~~~~~~~~e~ 231 (485)
T PF00118_consen 153 NFDLDNIKIIKIPGGSISDSELINGIVLDKGFSSPNMPKKIENPKILLLNCPLEYSKS-FKSEIRITSPEQLDELSKQEK 231 (485)
T ss_dssp THHGGGEEEEEEESSSSGGEEEESEEEESSSBSSTTSBSEEESEEEEEESSEBSSCCH-STEEEEESSTHHHHHHHHHHH
T ss_pred cccccchhhhhhccccccccccccceeeeccccccccccccccceEEeeecccccccc-cccccchhhHHHHHHHHhhhh
Confidence 2788889999999999999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChhhHHHHHHHhCCEEecccCCCCCCCC
Q 009426 268 RQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCL 347 (535)
Q Consensus 268 ~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~la~~tGa~ii~~~~~l~~~~l 347 (535)
+++++.+++|.+.+ +++|+++++||+.++++|.++||++++++++++|++|+++|||++++++++++++.+
T Consensus 232 ~~l~~~~~~i~~~~---------~~lIi~~~~i~~~~l~~l~~~~I~~i~~v~~~~l~~i~~~tg~~ii~~~~~l~~~~l 302 (485)
T PF00118_consen 232 KYLKKILEKIINLG---------VNLIISQKSIDDEALQYLNKNGILVIRRVSKEDLERIARATGASIISSLDDLSDEDL 302 (485)
T ss_dssp HHHHHHHHHHHTTT---------SSEEEESSEBTHHHHHHHHHCTHEEESSEHHHHHHHHHHHHTSBEBSSCGGSTGGGS
T ss_pred hhhccccceEeeec---------cceeeeecccccccchhhhhhhhhccccchHHHHHhhhcccCCcEecccccccchhh
Confidence 99999999998765 469999999999999999999999999999999999999999999999999998889
Q ss_pred cccceEEEEEECceEEEEEE--ccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHHHH
Q 009426 348 GWAGLVYEHVLGEEKYTFVE--NVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYL 425 (535)
Q Consensus 348 G~~~~v~~~~i~~~~~~~~~--~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L 425 (535)
|+|+.+++..+++++|++++ ++..++.+||+|||+++.+++|++++++||++++++++++|++|||||++|++|+++|
T Consensus 303 G~~~~v~~~~i~~~~~~~~~~~~~~~~~~~Till~g~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~e~~l~~~L 382 (485)
T PF00118_consen 303 GFCKSVEEREIGNKKYIFIEGIGCLSSKICTILLRGPTEFELEERERSIHDALKVLRSALKDGGVVPGGGATELHLSKAL 382 (485)
T ss_dssp EEEEEEEEEEETSSEEEEEEEHSESSSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSSEEEETTTHHHHHHHHHH
T ss_pred hhhhhhhhcccccccccccccccccccCceEEEeccccchhHHHHHHHHHHHHHHHHHhccCCceeecCcchhhhhhhhH
Confidence 99999999999999999998 5788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHHHH
Q 009426 426 VNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKR 505 (535)
Q Consensus 426 ~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~ 505 (535)
++++.+.++++++++++|++||+.||++|++|||+|+.+++.+++..|+.++++|+|+.+|++.||++.|||||+.+|+
T Consensus 383 -~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~h~~~~~~g~d~~~~~i~~~~~~gi~dp~~~k~ 461 (485)
T PF00118_consen 383 -RKYAKSLSGKEQLAIEAFADALESIPKTLAQNAGLDSSEVISKLKSFHNNGNNYGIDLDTGEIVDMKEAGILDPLLVKI 461 (485)
T ss_dssp -HHHHHCSSSHHHHHHHHHHHHTTHHHHHHHHHTTSTHHHHHHHHHHHHHSTTTEEEETTTTEEEETTTTTCEEEHHHHH
T ss_pred -HHhhhcccCchhhhHHHHHHHHHHhhhhhhhccCCCceeeehhhHhhhccccccCcCccCCceeccccccchhhHHHHH
Confidence 8999889999999999999999999999999999999999999999887778999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHhhcCc
Q 009426 506 QIINSGPVIASQLLLVDEVIRAGR 529 (535)
Q Consensus 506 ~~l~~A~e~a~~iL~iD~ii~~~~ 529 (535)
++|+.|+|+|++|||||++|.++|
T Consensus 462 ~~l~~A~~~a~~iL~id~iI~~~~ 485 (485)
T PF00118_consen 462 SALKSAVEIASLILRIDEIIMAKP 485 (485)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998865
No 26
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.1e-89 Score=734.59 Aligned_cols=461 Identities=25% Similarity=0.392 Sum_probs=421.4
Q ss_pred hhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccCh----HHHHHHHHHHhhhcc
Q 009426 11 EVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNP----TAIMIARTAVAQDDI 86 (535)
Q Consensus 11 ~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~~ 86 (535)
+...|.+++..|+.|+..+++++++||||+|++|||+++.|+++|||||+|||++|+++|| +++++++++++|+++
T Consensus 4 ~~~~~~~a~~~~i~a~~~ia~~v~ttLGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~e~a~~qd~e 83 (542)
T PRK00013 4 DIKFGEDARRKLLRGVNKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDPFENMGAQLVKEVASKTNDV 83 (542)
T ss_pred hhhchHHHHHHHHHHHHHHHHHhhccCCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCchhhHHHHHHHHHHHhcCcc
Confidence 3456789999999999999999999999999999999999999999999999999999999 799999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccc
Q 009426 87 SGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYES 166 (535)
Q Consensus 87 ~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~ 166 (535)
+||||||+++|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|++ +.+.|.++|+|+++
T Consensus 84 ~GDGTTtvviLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~~~-----~~~~l~~va~ts~~------ 152 (542)
T PRK00013 84 AGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVEAAVEELKKISKPVE-----DKEEIAQVATISAN------ 152 (542)
T ss_pred cCCccchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhccCCC-----CHHHHHHHHHhccc------
Confidence 9999999999999999999999999999999999999999999999999999986 77889999999875
Q ss_pred hHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCC-------cccccCceeEeeccc
Q 009426 167 LADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDM-------KRRAENCYILTCNVS 239 (535)
Q Consensus 167 ~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~-------~~~~~n~kIll~~~~ 239 (535)
+.+.+++++++|+..+.+.+ .|.+.+..| ..+++++++|++|++++.+|+| ++.++||+|+++|+.
T Consensus 153 ~~~~ls~lv~~Av~~v~~~g------~i~i~~~~~-~~~~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ilv~d~~ 225 (542)
T PRK00013 153 GDEEIGKLIAEAMEKVGKEG------VITVEESKG-FETELEVVEGMQFDRGYLSPYFVTDPEKMEAELENPYILITDKK 225 (542)
T ss_pred chHHHHHHHHHHHHHhCcCC------cEEEEEcCC-CCceEEEEEeEEecCCcccccccccccCCeEEEecCEEEEEcCc
Confidence 46789999999999885421 367777776 8889999999999999999965 788999999999986
Q ss_pred cccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcC------c
Q 009426 240 LEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAG------I 313 (535)
Q Consensus 240 Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~------I 313 (535)
+ ++++++. ..+++|.+.+ .++||++++|++.++++|..++ |
T Consensus 226 i-------------~~~~~l~-----------~~l~~i~~~g---------~~lvi~~~~I~~~al~~l~~~~~~g~~~i 272 (542)
T PRK00013 226 I-------------SNIQDLL-----------PVLEQVAQSG---------KPLLIIAEDVEGEALATLVVNKLRGTLKV 272 (542)
T ss_pred c-------------CCHHHHH-----------HHHHHHHHhC---------CCEEEECCCCcHHHHHHHHHcCCcccceE
Confidence 6 3444443 3466666555 2477888999999999999996 8
Q ss_pred eEEEecC-----hhhHHHHHHHhCCEEec-----ccCCCCCCCCcccceEEEEEECceEEEEEEccCCCC----------
Q 009426 314 IALRRAK-----RRNMERLVLACGGEAVN-----SVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPH---------- 373 (535)
Q Consensus 314 ~~v~~v~-----~~~l~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~---------- 373 (535)
+++++++ +++|+|||.+|||++++ ++++++++++|+|+.+++. .++|++++++++++
T Consensus 273 ~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v~~~---~~~~~~i~~~~~~~~i~~ri~~l~ 349 (542)
T PRK00013 273 VAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDATLEDLGQAKKVVVT---KDNTTIVDGAGDKEAIKARVAQIK 349 (542)
T ss_pred EEEecCCcccchhhhHHHHHHHcCCEEecccccCCcccCCHHHCCeeeEEEEe---cCEEEEEeCCCCHHHHHHHHHHHH
Confidence 9999886 78999999999999999 7999999999999999954 58899999887664
Q ss_pred -------------------------eeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHHHHHHH
Q 009426 374 -------------------------SCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNE 428 (535)
Q Consensus 374 -------------------------~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~ 428 (535)
.+||+|||+|+.+++|++|+++||++++++++++| +|||||++|++++.+| ++
T Consensus 350 ~~~~~~~~~~~~~~l~eRi~~l~g~~~tI~irG~t~~~l~E~er~i~Dal~~vk~al~~g-~VpGGGa~e~~~s~~L-~~ 427 (542)
T PRK00013 350 AQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEG-IVPGGGVALLRAAPAL-EA 427 (542)
T ss_pred HHHhhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccCcHHHHHHHHHHH-HH
Confidence 78999999999999999999999999999999997 9999999999999999 88
Q ss_pred HhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHHHHHHH
Q 009426 429 VKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQII 508 (535)
Q Consensus 429 ~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l 508 (535)
+ .+.++++|+++++|++||+.||++|++|||+|+.+++.+++..| +.++|+|+.+|++.||++.|||||+.||.++|
T Consensus 428 ~-~~~~~~~~~~i~~~a~Al~~ip~~La~NaG~d~~~vl~~l~~~~--~~~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al 504 (542)
T PRK00013 428 L-KGLNGDEATGINIVLRALEAPLRQIAENAGLEGSVVVEKVKNGK--GKGYGYNAATGEYVDMIEAGIIDPTKVTRSAL 504 (542)
T ss_pred h-cCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc--CCCEeEeCCCCceeehhhccCeecHHHHHHHH
Confidence 8 67889999999999999999999999999999999999999887 46799999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHhhcCcc
Q 009426 509 NSGPVIASQLLLVDEVIRAGRN 530 (535)
Q Consensus 509 ~~A~e~a~~iL~iD~ii~~~~~ 530 (535)
+.|+++|++||+||++|..++.
T Consensus 505 ~~A~~~a~~iL~id~iI~~~~~ 526 (542)
T PRK00013 505 QNAASVAGLLLTTEAVVADKPE 526 (542)
T ss_pred HHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999988763
No 27
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.6e-89 Score=733.32 Aligned_cols=462 Identities=23% Similarity=0.350 Sum_probs=418.2
Q ss_pred hcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccCh----HHHHHHHHHHhhhccc
Q 009426 12 VLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNP----TAIMIARTAVAQDDIS 87 (535)
Q Consensus 12 ~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~~~ 87 (535)
...|.+++..|+.++.+++++++|||||+||+|||+++.|+++|||||+||+++|+++|| +|++++++|++|++++
T Consensus 5 ~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDGaTIlk~i~~~hp~~~~~a~ll~~~a~~qd~e~ 84 (542)
T PRK12849 5 IKFDEEARRALERGVNKLADAVKVTLGPKGRNVVIDKSFGAPTITKDGVSIAKEIELEDPFENLGAQLVKEVASKTNDVA 84 (542)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCccHhHHHHHHHHHHHhcCCcc
Confidence 456789999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccch
Q 009426 88 GDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESL 167 (535)
Q Consensus 88 GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~ 167 (535)
||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++ +.+.|.++|+|+++ .
T Consensus 85 GDGTTtvviLageLL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~~~-----~~~~l~~va~ts~~------~ 153 (542)
T PRK12849 85 GDGTTTATVLAQALVQEGLKNVAAGANPMDLKRGIDKAVEAVVEELKALARPVS-----GSEEIAQVATISAN------G 153 (542)
T ss_pred CCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCC-----CHHHHHHHHHHhcC------C
Confidence 999999999999999999999999999999999999999999999999999986 77889999999875 4
Q ss_pred HHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccc-cEEEEEEEEeecCCCCCC-------cccccCceeEeeccc
Q 009426 168 ADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVD-TRLVEGLVLDHGSRHPDM-------KRRAENCYILTCNVS 239 (535)
Q Consensus 168 ~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~-s~li~Givl~~~~~~~~~-------~~~~~n~kIll~~~~ 239 (535)
.+++++++++|+..+.+. +.++ +. .|+..+| +++++|++|++++.+|.| ++.++||+|+++|+.
T Consensus 154 ~~~l~~lv~~Av~~v~~~-g~i~-----i~--~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~ 225 (542)
T PRK12849 154 DEEIGELIAEAMEKVGKD-GVIT-----VE--ESKTLETELEVTEGMQFDRGYLSPYFVTDPERMEAVLEDPLILLTDKK 225 (542)
T ss_pred hHHHHHHHHHHHHHhccC-CcEe-----EE--eCCCcceeEEEEEeEEEecCcccCcccccccCceEEeeCcEEEeecCC
Confidence 578999999999988542 2333 22 5777765 899999999999999854 788999999999986
Q ss_pred cccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHc------Cc
Q 009426 240 LEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARA------GI 313 (535)
Q Consensus 240 Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~------~I 313 (535)
+ ++++++.+ .++++.+.+ ..+||++++|++.++++|.++ ||
T Consensus 226 i-------------~~~~~~~~-----------~l~~i~~~~---------~~lvI~~~~I~~~al~~l~~~~~~~~~~i 272 (542)
T PRK12849 226 I-------------SSLQDLLP-----------LLEKVAQSG---------KPLLIIAEDVEGEALATLVVNKLRGGLKV 272 (542)
T ss_pred c-------------CCHHHHHH-----------HHHHHHHhC---------CCEEEECCCCcHHHHHHHHHhhhhccccE
Confidence 6 34444433 456666554 247788899999999999999 99
Q ss_pred eEEEecC-----hhhHHHHHHHhCCEEec-----ccCCCCCCCCcccceEEEEEECceEEEEEEccCCC-----------
Q 009426 314 IALRRAK-----RRNMERLVLACGGEAVN-----SVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNP----------- 372 (535)
Q Consensus 314 ~~v~~v~-----~~~l~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~----------- 372 (535)
+++++++ +++|+|||.+|||++++ ++++++++++|+|+.|++ +.++|+++++++++
T Consensus 273 ~avr~~~~~~~r~~~l~~ia~~tGa~~v~~~~~~~~~~~~~~~LG~~~~v~~---~~~~~~~i~g~~~~~~i~~r~~~l~ 349 (542)
T PRK12849 273 AAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGLKLEEVTLDDLGRAKRVTI---TKDNTTIVDGAGDKEAIEARVAQIR 349 (542)
T ss_pred EEEeCCCccchhHhHHHHHHHHhCCEEecccccCCcccCCHHHCceeeEEEE---eeeeEEEEeCCCCHHHHHHHHHHHH
Confidence 9999987 44599999999999999 688999899999999984 45889999888764
Q ss_pred ------------------------CeeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHHHHHHH
Q 009426 373 ------------------------HSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNE 428 (535)
Q Consensus 373 ------------------------~~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~ 428 (535)
+.+||+|||+|+.+++|++|+++||++++++++++| +|||||++|++++.+| ++
T Consensus 350 ~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~er~i~DAl~~~~~a~~~g-~VpGGGa~e~~ls~~L-~~ 427 (542)
T PRK12849 350 RQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVELKERKDRVEDALNATRAAVEEG-IVPGGGVALLRAAKAL-DE 427 (542)
T ss_pred HHHHhcCcHHHHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-eecCCCHHHHHHHHHH-HH
Confidence 489999999999999999999999999999999997 9999999999999999 88
Q ss_pred HhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHHHHHHH
Q 009426 429 VKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQII 508 (535)
Q Consensus 429 ~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l 508 (535)
++ +.++++|+++++|++||+.||++|++|||+|+.+++.+|+..| .++|||+.+|++.||++.|||||+.+|.++|
T Consensus 428 ~~-~~~g~~~~~i~~~a~Al~~ip~~La~NaG~d~~~vi~~L~~~~---~~~G~d~~~g~~~d~~~~GV~Dp~~vk~~al 503 (542)
T PRK12849 428 LA-GLNGDQAAGVEIVRRALEAPLRQIAENAGLDGSVVVAKVLELE---DGFGFNAATGEYGDLIAAGIIDPVKVTRSAL 503 (542)
T ss_pred hh-CCChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhhC---CCcceeCCCCccccHHhccCccCHHHHHHHH
Confidence 88 8899999999999999999999999999999999999998875 4799999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHhhcCccCCCC
Q 009426 509 NSGPVIASQLLLVDEVIRAGRNMRKP 534 (535)
Q Consensus 509 ~~A~e~a~~iL~iD~ii~~~~~~~~~ 534 (535)
+.|+|+|++||+||++|..++...+|
T Consensus 504 ~~A~e~A~~iL~id~iI~~~~~~~~~ 529 (542)
T PRK12849 504 QNAASVAGLLLTTEALVADKPEEEDP 529 (542)
T ss_pred HHHHHHHHHHHhHHHHHhcCCccCCC
Confidence 99999999999999999988765544
No 28
>KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-91 Score=681.13 Aligned_cols=520 Identities=67% Similarity=1.020 Sum_probs=501.0
Q ss_pred CcccccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHH
Q 009426 1 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTA 80 (535)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~ 80 (535)
|+...+++..+..+..+|+.-|+.++..+.+++++.+||+|..||++++.|++.+|+||.+.+++|+++||-+-++..++
T Consensus 1 a~~~~lnpkAEv~~~~aal~iNis~AigLqsV~~snlgPkgt~KmlvsgagdIklakdgnvLl~emQiqhPTa~lIakaa 80 (520)
T KOG0359|consen 1 AAAKLLNPKAEVAQHQAALALNISAAIGLQSVLVLNLGPKGTEKMLVSGAGDIKLAKDGNVLLKEMQIQHPTASLIAKVA 80 (520)
T ss_pred CCccCCCcHHHHHhhhcceeeccccccceeeeehhccCchhHHHhccCCccceEEEecchhhHHHHhhcCchHHHHHHHH
Confidence 45566788888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhc
Q 009426 81 VAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLR 160 (535)
Q Consensus 81 ~~~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~ 160 (535)
..|++..|||||++|+|.++|+++|...+..|+||..|.+||+.|.+.++++|++.+.++ +++.|..+++|+++
T Consensus 81 tAqdd~tGDGttS~VlligEllkqa~~~i~eGlhprii~~gfe~a~~~~l~~L~k~~~~~------~~~~L~~va~tsl~ 154 (520)
T KOG0359|consen 81 TAQDDITGDGTTSVVLLIGELLKQADRYISEGLHPRIITEGFEAAKNKALEFLEKVSREV------DRETLKDVARTSLR 154 (520)
T ss_pred HHhhcccCCCcceEEEeeHHHHHHHHHHhhcCCCcchhhhHHHHHHHHHHhhhhccccch------hHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999999776666 68999999999999
Q ss_pred cccccchHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeecccc
Q 009426 161 TKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSL 240 (535)
Q Consensus 161 sk~~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~L 240 (535)
+|+....++.++++++++++.+.+..+.+|+.+++|+++...+..|..+++|+++|++.+||.||+.++|+.|+++|.+|
T Consensus 155 Tkv~~~la~~lt~~vv~aVl~i~~~~~~idl~mveim~mq~~s~~dT~~v~glvLdhg~rHpdmp~~~e~a~iL~~NvSL 234 (520)
T KOG0359|consen 155 TKVHAELADVLTPIVVDSVLCIRRQEEPIDLFMVEIMEMQHKSLHDTSLVQGLVLDHGARHPDMPRRVEDAYILICNVSL 234 (520)
T ss_pred CcccHHHHhHhHHHHHhhheeeccCCCCcchhHHHhhhhccCchhhhHHhhhhhccCCCCCcccccchhceEEEEeeccc
Confidence 99999999999999999999998545679999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecC
Q 009426 241 EYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAK 320 (535)
Q Consensus 241 e~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~ 320 (535)
||+|+|.++.|-|++.+|.+.+...|++++.+++++|+++++++| .++|++||||||..++.|+++||++++|.+
T Consensus 235 EYEK~EinsgffYsta~ere~L~~~eR~Fi~~r~~kiielk~~vc-----~fvvinqkGidp~sld~~a~~gIlaLRRAK 309 (520)
T KOG0359|consen 235 EYEKPEINSGFFYSTAEEREVLVLAERKFIDQRVRKIIELKRKVC-----EFVVINQKGIDPTSLDSLAKSGILALRRAK 309 (520)
T ss_pred cccccccccchhccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----eEEEecccCCCCCcchhhhhcchHHHHHHh
Confidence 999999999999999999999999999999999999999999999 489999999999999999999999999999
Q ss_pred hhhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHH
Q 009426 321 RRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRA 400 (535)
Q Consensus 321 ~~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~ 400 (535)
+++|||+..+||+..++++++++++.+|+|+.|+|.++|+++|+|+++|++|.+|||+|+||+++.+.+.+++++|++++
T Consensus 310 RRNmERL~lacGG~a~nsvddLtp~~LG~aglVye~tlGEEkfTFIE~~~~p~S~TiLikgpnkht~tQikdairdglra 389 (520)
T KOG0359|consen 310 RRNMERLVLACGGEAVNSVDDLTPDYLGYAGLVYEYTLGEEKFTFIEKCNNPSSVTILIKGPNKHTITQIKDAIRDGLRA 389 (520)
T ss_pred hhhHHHHHHhhccceecccccCChhhccccceeEEeeccceeeEeeecCCCCcceEEEEeCCccchHHHHHHHHhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCee
Q 009426 401 VKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIV 480 (535)
Q Consensus 401 ~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~ 480 (535)
++++++++.++||+|++|.+++.+| +...++.+++.++++++|++||..+|++|+.|+|+|+.+.+.++...|... ..
T Consensus 390 v~ntl~d~~~i~Gaga~~va~~~~l-r~~k~~vkgra~~g~~afa~all~ipk~La~nsg~D~qe~l~~l~~e~~~~-~~ 467 (520)
T KOG0359|consen 390 VKNTLEDKCGIPGAGAFEVALGRHL-RESKKSVKGRAYLGVKAFANALLVIPKTLAKNSGLDEQETLVSLKKEHEVT-LR 467 (520)
T ss_pred HHHHhhhcccccCchHHHHHHHHHH-HHhhhccCchhhhhHHHHHhhhhhhhHHHHHhcCCchHHHHHHHHHhhhhh-hc
Confidence 9999999999999999999999999 788888999999999999999999999999999999999999999988544 45
Q ss_pred eEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCccCCC
Q 009426 481 GLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRK 533 (535)
Q Consensus 481 Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~~~~~ 533 (535)
|+|..+|+.++....||||.+.||+++|.++.-+|+.||-+|+|++++.+..|
T Consensus 468 g~dl~~g~~~~~~~~gi~Dny~v~~~~l~s~~via~nlLlvDEi~rAG~~~lk 520 (520)
T KOG0359|consen 468 GLDLFRGEECDPSRKGIYDNYSVKKQLLRSEAVIATNLLLVDEIIRAGMSSLK 520 (520)
T ss_pred ccccccCCccchhhccccchHHHHHHHhhhhHHHHHHHHHHHHHHHccccccC
Confidence 99999999999999999999999999999999999999999999999887643
No 29
>PTZ00114 Heat shock protein 60; Provisional
Probab=100.00 E-value=1.8e-88 Score=729.02 Aligned_cols=463 Identities=22% Similarity=0.333 Sum_probs=418.6
Q ss_pred hhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccCh----HHHHHHHHHHhhhc
Q 009426 10 AEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNP----TAIMIARTAVAQDD 85 (535)
Q Consensus 10 ~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~ 85 (535)
.+...|.+++..|+.++..++++++|||||+||+|||+++.|+++|||||+||+++|+++|| +++|+++++++|++
T Consensus 15 ~~~~~~~~a~~~~i~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDG~TIlk~i~~~~p~~~~~a~ll~~~a~~qd~ 94 (555)
T PTZ00114 15 KEIRFGDEARQSLLKGIERLADAVAVTLGPKGRNVIIEQEYGSPKITKDGVTVAKAIEFSDRFENVGAQLIRQVASKTND 94 (555)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCCcEEEECCCCCeEEeeChHHHHHhcCcCCcchhHHHHHHHHHHHhhcc
Confidence 35778899999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhcccccc
Q 009426 86 ISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYE 165 (535)
Q Consensus 86 ~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~ 165 (535)
++||||||+|+|+++||+++.++++.|+||..|++||+.|.+.++++|+++++|++ +.+.+.++|+|++++
T Consensus 95 evGDGTTtvvvLa~~LL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~v~-----~~~~l~~va~ts~~~---- 165 (555)
T PTZ00114 95 KAGDGTTTATILARAIFREGCKAVAAGLNPMDLKRGIDLAVKVVLESLKEQSRPVK-----TKEDILNVATISANG---- 165 (555)
T ss_pred ccCCcccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCC-----CHHHHHHHHHHHcCC----
Confidence 99999999999999999999999999999999999999999999999999999986 778899999999865
Q ss_pred chHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCccccc-EEEEEEEEeecCCCCCC-------cccccCceeEeec
Q 009426 166 SLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDT-RLVEGLVLDHGSRHPDM-------KRRAENCYILTCN 237 (535)
Q Consensus 166 ~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s-~li~Givl~~~~~~~~~-------~~~~~n~kIll~~ 237 (535)
.+++++++++|+..+.+.+ .|.+..|++..++ ++++|++|++++.+|.| +..++||+|+++|
T Consensus 166 --~~~l~~li~eAv~~vg~~g--------~I~~~~g~~~~ds~~~v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d 235 (555)
T PTZ00114 166 --DVEIGSLIADAMDKVGKDG--------TITVEDGKTLEDELEVVEGMSFDRGYISPYFVTNEKTQKVELENPLILVTD 235 (555)
T ss_pred --hHHHHHHHHHHHHHhCcCC--------cEEEcCCCCccceEEEEEEEEEeccccccccccccccCeEEecCCEEEEEc
Confidence 4689999999999886421 2667789999998 89999999999999965 7889999999999
Q ss_pred cccccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcC-----
Q 009426 238 VSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAG----- 312 (535)
Q Consensus 238 ~~Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~----- 312 (535)
++|+ +++++ ...++++.+.+ ..++|++++|++.++++|..++
T Consensus 236 ~~L~-------------~~~~i-----------~~~le~i~~~~---------~~llI~~~~i~~~al~~L~~n~~~g~~ 282 (555)
T PTZ00114 236 KKIS-------------SIQSI-----------LPILEHAVKNK---------RPLLIIAEDVEGEALQTLIINKLRGGL 282 (555)
T ss_pred CCCC-------------CHHHH-----------HHHHHHHHHhC---------CCEEEECCCCcHHHHHHHHHhCCCCce
Confidence 9985 23332 23456665544 2377778999999999999986
Q ss_pred -ceEEEe-----cChhhHHHHHHHhCCEEeccc------CCCCCCCCcccceEEEEEECceEEEEEEccC----------
Q 009426 313 -IIALRR-----AKRRNMERLVLACGGEAVNSV------DDLTPGCLGWAGLVYEHVLGEEKYTFVENVK---------- 370 (535)
Q Consensus 313 -I~~v~~-----v~~~~l~~la~~tGa~ii~~~------~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~---------- 370 (535)
|+++++ +++++|+|||.+|||+++++. ++++++++|+|+.|++.. ++++++++++
T Consensus 283 ~i~avk~~~~g~~~~~~l~~la~~tG~~~i~~~~~~~~l~~~~~~~LG~a~~v~~~~---~~~~~~~~~~~~~~i~~r~~ 359 (555)
T PTZ00114 283 KVCAVKAPGFGDNRKDILQDIAVLTGATVVSEDNVGLKLDDFDPSMLGSAKKVTVTK---DETVILTGGGDKAEIKERVE 359 (555)
T ss_pred EEEEEecCCCCcchHHHHHHHHHHhCCEEecccccccCcccCCHHHcCCCceEEEEe---ceEEEEeCCCcHHHHHHHHH
Confidence 999988 567999999999999999997 778888999999999765 5667776665
Q ss_pred -------------------------CCCeeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHHHH
Q 009426 371 -------------------------NPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYL 425 (535)
Q Consensus 371 -------------------------~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L 425 (535)
.++.+||+|||+|+.+++|++|+++||++++++++++| +|||||++|++++.+|
T Consensus 360 ~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~i~G~t~~~l~E~~r~i~Dal~~~k~a~~~g-vVpGGGa~e~~~s~~L 438 (555)
T PTZ00114 360 LLRSQIERTTSEYDKEKLKERLAKLSGGVAVIKVGGASEVEVNEKKDRIEDALNATRAAVEEG-IVPGGGVALLRASKLL 438 (555)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCcHHHHHHHHHH
Confidence 56899999999999999999999999999999999987 9999999999999999
Q ss_pred HHHHhc--ccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHH
Q 009426 426 VNEVKK--TVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSV 503 (535)
Q Consensus 426 ~~~~~~--~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~v 503 (535)
++++. +.++++|+++++|++||+.||++|++|||+|+.+++.+|++ +.++++|||+.+|++.||++.|||||+.|
T Consensus 439 -~~~~~~~~~~~~~~~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~--~~~~~~G~d~~~g~~~d~~~~GI~Dp~~v 515 (555)
T PTZ00114 439 -DKLEEDNELTPDQRTGVKIVRNALRLPTKQIAENAGVEGAVVVEKILE--KKDPSFGYDAQTGEYVNMFEAGIIDPTKV 515 (555)
T ss_pred -HHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh--cCCCCEeEeCCCCcEeeHHhCCCEeCHHH
Confidence 88875 57899999999999999999999999999999999999976 23567999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHHhhcCccC
Q 009426 504 KRQIINSGPVIASQLLLVDEVIRAGRNM 531 (535)
Q Consensus 504 k~~~l~~A~e~a~~iL~iD~ii~~~~~~ 531 (535)
|+++|+.|+++|++||+||++|...+..
T Consensus 516 k~~al~~A~~~A~~iL~id~iI~~~~~~ 543 (555)
T PTZ00114 516 VRSALVDAASVASLMLTTEAAIVDLPKE 543 (555)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHhCCcc
Confidence 9999999999999999999999987643
No 30
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=3.7e-88 Score=724.06 Aligned_cols=460 Identities=22% Similarity=0.358 Sum_probs=415.2
Q ss_pred hcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChH----HHHHHHHHHhhhccc
Q 009426 12 VLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPT----AIMIARTAVAQDDIS 87 (535)
Q Consensus 12 ~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~----a~ll~~~~~~~~~~~ 87 (535)
...+.+++..|+.|+.+++++++|||||+||+|||+++.|+++|||||+||+++|+++||+ +++++++|++|++++
T Consensus 6 ~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~G~~~ITnDG~tIlk~i~i~hp~~~~ga~ll~~~a~~qd~e~ 85 (544)
T PRK12850 6 IRFSTDARDRLLRGVNILANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVKEVASKTNDLA 85 (544)
T ss_pred ecccHHHHHHHHHHHHHHHHHHhCCcCCCCCCEEEECCCCCeeEeccHHHHHHHhcCCChhhhHHHHHHHHHHhhhcchh
Confidence 4457789999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccch
Q 009426 88 GDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESL 167 (535)
Q Consensus 88 GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~ 167 (535)
||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|++++++++ +.+.|.+++++++++
T Consensus 86 GDGTTt~viLa~~LL~~a~~li~~GihP~~I~~G~~~a~~~~~~~L~~~s~~v~-----~~~~l~~va~~s~~~------ 154 (544)
T PRK12850 86 GDGTTTATVLAQAIVREGAKLVAAGMNPMDLKRGIDLAVAAVVDELKKIAKKVT-----SSKEIAQVATISANG------ 154 (544)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhccCCC-----CHHHHHHHHHHhcCC------
Confidence 999999999999999999999999999999999999999999999999999986 778899999998765
Q ss_pred HHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCC-------cccccCceeEeecccc
Q 009426 168 ADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDM-------KRRAENCYILTCNVSL 240 (535)
Q Consensus 168 ~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~-------~~~~~n~kIll~~~~L 240 (535)
.+.+++++++|+..+.+. +.++++.+ +..| +++++++|++|++++.+|+| ++.++||+|+++|+.+
T Consensus 155 ~~~l~~lv~eAv~~vg~~-g~i~v~~~---~~~g---~~~~~v~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i 227 (544)
T PRK12850 155 DESIGEMIAEAMDKVGKE-GVITVEEA---KTLG---TELDVVEGMQFDRGYLSPYFVTNPEKMRAELEDPYILLHEKKI 227 (544)
T ss_pred HHHHHHHHHHHHHHhccc-CceeeEEc---cccC---cceEEEEeEEecCccCcCccccccccCeEEEeCCEEEEEeccc
Confidence 478999999999998643 23444332 2233 78999999999999999875 7889999999999865
Q ss_pred ccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCc------e
Q 009426 241 EYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGI------I 314 (535)
Q Consensus 241 e~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I------~ 314 (535)
+ +.++ +...++++.+.+ .++||++++|+|.++++|..+|| +
T Consensus 228 ~-------------~~~~-----------i~~~l~~i~~~g---------~~lvI~~~~I~d~al~~l~~n~i~~~~~~~ 274 (544)
T PRK12850 228 S-------------NLQD-----------LLPILEAVVQSG---------RPLLIIAEDVEGEALATLVVNKLRGGLKSV 274 (544)
T ss_pred C-------------CHHH-----------HHHHHHHHHHhC---------CCEEEECCCCChHHHHHHHHcCCcccceEE
Confidence 2 2222 344567776655 23778889999999999999998 9
Q ss_pred EEEe-----cChhhHHHHHHHhCCEEec-----ccCCCCCCCCcccceEEEEEECceEEEEEEccCCCC-----------
Q 009426 315 ALRR-----AKRRNMERLVLACGGEAVN-----SVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPH----------- 373 (535)
Q Consensus 315 ~v~~-----v~~~~l~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~----------- 373 (535)
++++ +++++|+|||++|||++++ ++++++++++|+|+.|++. .++|++++++++++
T Consensus 275 avk~p~~g~~~~~~le~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v~~~---~~~~~~i~g~~~~~~i~~ri~~l~~ 351 (544)
T PRK12850 275 AVKAPGFGDRRKAMLEDIAVLTGGQVISEDLGIKLENVTLDMLGRAKRVLIT---KENTTIIDGAGDKKNIEARVKQIRA 351 (544)
T ss_pred EEeCCCcCcccHHHHHHHHHHhCCEEeccccCCCcccCCHHHcCCCcEEEEE---eeeEEEEeCCCCHHHHHHHHHHHHH
Confidence 9998 7899999999999999999 6889998999999999854 47899999887643
Q ss_pred ------------------------eeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHHHHHHHH
Q 009426 374 ------------------------SCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEV 429 (535)
Q Consensus 374 ------------------------~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~ 429 (535)
.+||+|||+|+.+++|++|+++||++++++++++| +|||||++|++++.+| +++
T Consensus 352 ~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~~~k~a~~~g-~VpGGGa~e~~~s~~L-~~~ 429 (544)
T PRK12850 352 QIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEEG-IVPGGGVALLRARSAL-RGL 429 (544)
T ss_pred HHHhcccHHHHHHHHHHHHHhcCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhcC-CccCCcHHHHHHHHHH-Hhc
Confidence 89999999999999999999999999999999996 9999999999999999 888
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHHHHHHHH
Q 009426 430 KKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIIN 509 (535)
Q Consensus 430 ~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~ 509 (535)
.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..| .++|+|+.+|++.||++.|||||+.||.++|+
T Consensus 430 -~~~~~~~~~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~---~~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~ 505 (544)
T PRK12850 430 -KGANADETAGIDIVRRALEEPLRQIATNAGFEGSVVVGKVAELP---GNFGFNAQTGEYGDMVEAGIIDPAKVTRTALQ 505 (544)
T ss_pred -cCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhC---CCcceeCCCCcccchhhccCcccHHHHHHHHH
Confidence 67789999999999999999999999999999999999998875 46899999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHhhcCccC
Q 009426 510 SGPVIASQLLLVDEVIRAGRNM 531 (535)
Q Consensus 510 ~A~e~a~~iL~iD~ii~~~~~~ 531 (535)
.|+++|++||+||++|..++.+
T Consensus 506 ~A~~~a~~iL~id~iI~~~~~~ 527 (544)
T PRK12850 506 DAASIAALLITTEAMVAEAPKK 527 (544)
T ss_pred HHHHHHHHHHhHHHhhccCCCC
Confidence 9999999999999999887643
No 31
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=5.2e-88 Score=720.07 Aligned_cols=453 Identities=25% Similarity=0.383 Sum_probs=414.2
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccCh----HHHHHHHHHHhhhcccC
Q 009426 13 LNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNP----TAIMIARTAVAQDDISG 88 (535)
Q Consensus 13 ~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~~~G 88 (535)
..|.+++..|+.++..++++++|||||+||+|||+++.|+++|||||+||+++|+++|| +++++++++++|++++|
T Consensus 4 ~~g~~a~~~~i~~~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~a~ll~~~a~~qd~e~G 83 (520)
T cd03344 4 KFGEEARKALLRGVNKLADAVKVTLGPKGRNVVIEKSFGSPKITKDGVTVAKEIELEDPFENMGAQLVKEVASKTNDVAG 83 (520)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEECCCCCeEEEecHHHHHHHcccCCcchhHHHHHHHHHHhhhccccC
Confidence 46789999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccchH
Q 009426 89 DGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLA 168 (535)
Q Consensus 89 DGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~~ 168 (535)
|||||+++|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|++ +.+.+.++|+|++++ .
T Consensus 84 DGTTtvviLa~~Ll~~~~~li~~gi~p~~I~~G~~~a~~~~~~~L~~~~~~i~-----~~~~l~~va~ts~~~------~ 152 (520)
T cd03344 84 DGTTTATVLARAIIKEGLKAVAAGANPMDLKRGIEKAVEAVVEELKKLSKPVK-----TKEEIAQVATISANG------D 152 (520)
T ss_pred CCcchHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHhccCCC-----CHHHHHHHHHHhcCC------h
Confidence 99999999999999999999999999999999999999999999999999986 788999999999975 5
Q ss_pred HHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccc-cEEEEEEEEeecCCCCCC---c----ccccCceeEeecccc
Q 009426 169 DQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVD-TRLVEGLVLDHGSRHPDM---K----RRAENCYILTCNVSL 240 (535)
Q Consensus 169 ~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~-s~li~Givl~~~~~~~~~---~----~~~~n~kIll~~~~L 240 (535)
+++++++++|+..+.+. + .|.+ .+|++.+| +++++|++|++++.+|.| | +.++||+|+++|++|
T Consensus 153 ~~l~~lv~~A~~~v~~~-~-----~i~v--~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~l 224 (520)
T cd03344 153 EEIGELIAEAMEKVGKD-G-----VITV--EEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEVELENPYILLTDKKI 224 (520)
T ss_pred HHHHHHHHHHHHHhccC-C-----cEEE--EeCCCcceeEEEEeeEEecCCCCCCccccCcccCeEEeeCCEEEEECCCC
Confidence 78999999999988542 1 2333 47888888 799999999999999875 3 678999999999997
Q ss_pred ccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCc------e
Q 009426 241 EYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGI------I 314 (535)
Q Consensus 241 e~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I------~ 314 (535)
++++++.+ .+++|.+.+ .++++++++|++.++++|.++|+ +
T Consensus 225 -------------~~~~~l~~-----------~l~~i~~~~---------~~lvi~~~~i~~~al~~l~~~~i~~~~~v~ 271 (520)
T cd03344 225 -------------SSIQELLP-----------ILELVAKAG---------RPLLIIAEDVEGEALATLVVNKLRGGLKVC 271 (520)
T ss_pred -------------CCHHHHHH-----------HHHHHHhhC---------CCEEEEcCCCCHHHHHHHHHcCCccCceEE
Confidence 34444333 456666554 24778899999999999999998 8
Q ss_pred EEEec-----ChhhHHHHHHHhCCEEec-----ccCCCCCCCCcccceEEEEEECceEEEEEEccCCC------------
Q 009426 315 ALRRA-----KRRNMERLVLACGGEAVN-----SVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNP------------ 372 (535)
Q Consensus 315 ~v~~v-----~~~~l~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~------------ 372 (535)
++++. ++++++|||.+|||++++ ++++++++++|+|+.|++.. ++|+++++++.+
T Consensus 272 avk~~~~~~~~~~~l~~la~~tGa~~~~~~~~~~~~~~~~~~LG~~~~v~~~~---~~~~~i~~~~~~~~i~~ri~~l~~ 348 (520)
T cd03344 272 AVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDVTLEDLGRAKKVVVTK---DDTTIIGGAGDKAAIKARIAQIRK 348 (520)
T ss_pred EEeCCCCCcccHHHHHHHHHHhCCEEecccccCCcccCCHHHCCcceEEEEee---ceEEEEeCCCCHHHHHHHHHHHHH
Confidence 98876 788999999999999999 78889888999999999644 789999888664
Q ss_pred -----------------------CeeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHHHHHHHH
Q 009426 373 -----------------------HSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEV 429 (535)
Q Consensus 373 -----------------------~~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~ 429 (535)
+.|||+|||+|+.+++|++|+++||++++++++++| +|||||++|++++++| +++
T Consensus 349 ~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~~r~i~Dal~~~k~a~~~g-~VpGGGa~e~~~s~~L-~~~ 426 (520)
T cd03344 349 QIEETTSDYDKEKLQERLAKLSGGVAVIKVGGATEVELKEKKDRVEDALNATRAAVEEG-IVPGGGVALLRASPAL-DKL 426 (520)
T ss_pred HHHhcCCHHHHHHHHHHHHHhcCCeEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHhcC-CCcCCcHHHHHHHHHH-HHh
Confidence 589999999999999999999999999999999997 9999999999999999 888
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHHHHHHHH
Q 009426 430 KKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIIN 509 (535)
Q Consensus 430 ~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~ 509 (535)
+. .++++|+++++|++||+.||++|++|||+|+.+++.+++..|. ++|+|+.+|++.||++.|||||+.+|.++|+
T Consensus 427 ~~-~~~~~~~~~~~~a~Al~~ip~~La~NaG~d~~~vi~~l~~~~~---~~G~d~~~g~~~d~~~~gV~Dp~~vk~~~l~ 502 (520)
T cd03344 427 KA-LNGDEKLGIEIVRRALEAPLRQIAENAGVDGSVVVEKVLESPD---GFGYDAATGEYVDMIEAGIIDPTKVVRSALQ 502 (520)
T ss_pred cc-CChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhcC---CEeEECCCCcccchHhccCeecHHHHHHHHH
Confidence 87 8999999999999999999999999999999999999998773 7999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHhh
Q 009426 510 SGPVIASQLLLVDEVIR 526 (535)
Q Consensus 510 ~A~e~a~~iL~iD~ii~ 526 (535)
.|+++|++||+||.+|.
T Consensus 503 ~A~~~a~~iL~id~~i~ 519 (520)
T cd03344 503 NAASVASLLLTTEALVV 519 (520)
T ss_pred HHHHHHHHHHhhheEEe
Confidence 99999999999999875
No 32
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=6e-88 Score=721.95 Aligned_cols=460 Identities=22% Similarity=0.347 Sum_probs=416.1
Q ss_pred hcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccCh----HHHHHHHHHHhhhccc
Q 009426 12 VLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNP----TAIMIARTAVAQDDIS 87 (535)
Q Consensus 12 ~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~~~ 87 (535)
...+.+++..|+.++..+++++++||||+||+|||+++.|+++|||||+||+++|+++|| +|++++++|++|++++
T Consensus 6 ~~~~~~a~~~~~~~~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~~~a~~qd~e~ 85 (541)
T PRK12851 6 VKFHVEAREKMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPTITNDGVTIAKEIELEDKFENMGAQMVREVASKTNDVA 85 (541)
T ss_pred ecccHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEECCCCCeeEecCHHHHHHHccCCCchhhHHHHHHHHHHHhhhHhh
Confidence 345679999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccch
Q 009426 88 GDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESL 167 (535)
Q Consensus 88 GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~ 167 (535)
||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++ +.+.+.++|+++++ +
T Consensus 86 GDGTTtvviLa~~LL~~a~~li~~Gihp~~I~~G~~~a~~~~~~~L~~~s~~~~-----~~~~l~~va~~s~~------~ 154 (541)
T PRK12851 86 GDGTTTATVLAQAIVREGAKAVAAGANPMDLKRGIDRAVAAVVEELKANARPVT-----TNAEIAQVATISAN------G 154 (541)
T ss_pred CCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCC-----CHHHHHHHHHHhcc------C
Confidence 999999999999999999999999999999999999999999999999999986 67789999988863 4
Q ss_pred HHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCC-------CcccccCceeEeecccc
Q 009426 168 ADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPD-------MKRRAENCYILTCNVSL 240 (535)
Q Consensus 168 ~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~-------~~~~~~n~kIll~~~~L 240 (535)
.++|++++++|+..+.+. + .+++.+.. +..+++++++|++|++++.+|. |++.++||+|+++|+++
T Consensus 155 ~~~l~~lv~~Av~~vg~~-g-----~i~i~~~~-~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Ilv~d~~i 227 (541)
T PRK12851 155 DAEIGRLVAEAMEKVGNE-G-----VITVEESK-TAETELEVVEGMQFDRGYLSPYFVTDADKMEAELEDPYILIHEKKI 227 (541)
T ss_pred hHHHHHHHHHHHHHhccc-C-----ceEEEEcc-CCCcceEEEEEEEecCCccccccccCCCCCeEEecccEEEEEcCCc
Confidence 678999999999988542 1 23444444 6678899999999999999995 89999999999999986
Q ss_pred ccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCc------e
Q 009426 241 EYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGI------I 314 (535)
Q Consensus 241 e~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I------~ 314 (535)
+ +.++ +...+++|.+.+ .++||++++|++.++++|..+|| +
T Consensus 228 ~-------------~~~~-----------i~~~l~~i~~~~---------~~lvi~~~~I~~~al~~l~~n~i~g~~~i~ 274 (541)
T PRK12851 228 S-------------NLQD-----------LLPVLEAVVQSG---------KPLLIIAEDVEGEALATLVVNKLRGGLKVA 274 (541)
T ss_pred C-------------cHHH-----------HHHHHHHHHHhC---------cCEEEECCCCChHHHHHHHHcCCcCceeEE
Confidence 3 1221 335567776655 23777889999999999999986 8
Q ss_pred EEEe-----cChhhHHHHHHHhCCEEec-----ccCCCCCCCCcccceEEEEEECceEEEEEEccCCCC-----------
Q 009426 315 ALRR-----AKRRNMERLVLACGGEAVN-----SVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPH----------- 373 (535)
Q Consensus 315 ~v~~-----v~~~~l~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~----------- 373 (535)
++++ +++++|+|||.+|||++++ ++++++++++|+|+.|++.. ++|+++++++++.
T Consensus 275 av~~p~~~~~~~~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~~~~v~~~~---~~~~~i~~~~~~~~i~~ri~~l~~ 351 (541)
T PRK12851 275 AVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLENVTLEQLGRAKKVVVEK---ENTTIIDGAGSKTEIEGRVAQIRA 351 (541)
T ss_pred EEecCccccccHhHHHHHHHHhCCEEeccCCCCCcCcCCHHHcCCccEEEEEc---ceEEEEcCCCCHHHHHHHHHHHHH
Confidence 8886 8899999999999999999 68888888999999998644 8899998887642
Q ss_pred ------------------------eeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHHHHHHHH
Q 009426 374 ------------------------SCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEV 429 (535)
Q Consensus 374 ------------------------~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~ 429 (535)
.+||+|||+|+.+++|++|+++||++++++++++| +|||||++|++++.+| +++
T Consensus 352 ~~~~~~~~~~~~~l~~ri~~l~g~~~tI~irG~t~~~l~E~er~i~DAl~a~~~al~~g-~VpGGGa~e~~~s~~L-~~~ 429 (541)
T PRK12851 352 QIEETTSDYDREKLQERLAKLAGGVAVIRVGASTEVEVKEKKDRVDDALHATRAAVEEG-IVPGGGVALLRAVKAL-DKL 429 (541)
T ss_pred HHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccCchHHHHHHHHHH-HHH
Confidence 78999999999999999999999999999999997 9999999999999999 888
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHHHHHHHH
Q 009426 430 KKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIIN 509 (535)
Q Consensus 430 ~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~ 509 (535)
+.. ++++++++++|++||+.||++|++|||+|+.+++.+|+..| .++|+|+.+|++.||++.|||||+.+|.++|+
T Consensus 430 ~~~-~~~~~~~~~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~---~~~G~d~~~g~~~d~~~~GIiDp~~vk~~al~ 505 (541)
T PRK12851 430 ETA-NGDQRTGVEIVRRALEAPVRQIAENAGAEGSVVVGKLREKP---GGYGFNAATNEYGDLYAQGVIDPVKVVRTALQ 505 (541)
T ss_pred hcC-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhC---CCeeeeCCCCCccchhhccCEecHHHHHHHHH
Confidence 876 88999999999999999999999999999999999998876 37999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHhhcCccC
Q 009426 510 SGPVIASQLLLVDEVIRAGRNM 531 (535)
Q Consensus 510 ~A~e~a~~iL~iD~ii~~~~~~ 531 (535)
.|+|+|++||+||++|..++.+
T Consensus 506 ~A~e~A~~iL~id~iI~~~~~~ 527 (541)
T PRK12851 506 NAASVAGLLLTTEAMVAEKPKK 527 (541)
T ss_pred HHHHHHHHHHhHHHhhhcCCCC
Confidence 9999999999999999887643
No 33
>KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.4e-88 Score=666.78 Aligned_cols=511 Identities=26% Similarity=0.423 Sum_probs=472.3
Q ss_pred cccCcchhhcch-HHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHh
Q 009426 4 RVLNPNAEVLNK-SAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVA 82 (535)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 82 (535)
+++++|+...+| ++++..|+.||++++++++|+|||+||+||++|+.|++.+|||.+||+++|+++||+|||++++++.
T Consensus 12 q~~k~g~r~~~~~e~~v~~ni~a~~ela~~~rs~yGpng~nK~vvnh~~k~~~TndaatIlrelev~HPaakllv~a~~~ 91 (537)
T KOG0362|consen 12 QMLKEGARSPSGEEEAVIRNIAAVRELANVIRSAYGPNGRNKMVVNHLGKTFVTNDAATILRELEVEHPAAKLLVEATQM 91 (537)
T ss_pred hHHhccccCcccchHHHHHHHHHHHHHHHHHHhhcCCCCcceeeecccceEEEcCChHHHHHHhhccCcHHHHHHHHHHH
Confidence 356677777777 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccc
Q 009426 83 QDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTK 162 (535)
Q Consensus 83 ~~~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk 162 (535)
|+++.||||+++|+|+++||++|.++|+.|++|.+|++||+.|.+.+++.|+++-+..- .+..|.+ ..+++++.+|
T Consensus 92 q~~~iGDgtnfvvvla~~LLe~Ae~li~~Gl~~~ei~~gy~~A~~~~~e~l~~lv~~~~-~d~~d~~---~~~rs~i~sk 167 (537)
T KOG0362|consen 92 QEEEIGDGTNFVVVLAGALLEQAEELIRMGLTPAEISEGYETATKEALEILPELVVQSI-GDLEDKE---WALRSVIMSK 167 (537)
T ss_pred HHHhhCCCceEeehhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHhc-ccccChH---HHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999998755421 1122443 7788888887
Q ss_pred cccchHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeecccccc
Q 009426 163 LYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEY 242 (535)
Q Consensus 163 ~~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~ 242 (535)
.. ...+++++++++|++++.+. ..|+.++|+++|+.|++.++|+++.|++|++..... ++..+.+||++++||++.
T Consensus 168 q~-~~ed~l~~lVa~ac~si~p~-~~FnvdnIrVcKi~Gg~l~~S~Vv~GmVfkr~~eG~--v~~ak~arvAvf~cP~d~ 243 (537)
T KOG0362|consen 168 QY-GNEDFLTKLVAKACVSILPL-MSFNVDNIRVCKILGGGLEDSCVVCGMVFKRDPEGE--VKSAKDARVAVFACPFDI 243 (537)
T ss_pred hc-chHHHHHHHHHHHHHhhccc-ccccccceEEEEEecCCcccceeeEEEEeccccCCc--ccccccceeEEEecCCCc
Confidence 43 45789999999999999886 459999999999999999999999999999765322 367788999999999999
Q ss_pred ccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChh
Q 009426 243 EKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRR 322 (535)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~ 322 (535)
..+|++.++.+++++++..|...|...++..++.|...+ .++|++.+.+++.+++||++.+|++++.-++.
T Consensus 244 ~~TEtkgTvLi~~A~el~~FSKgEe~lle~~vk~Ia~~g---------vkViV~~g~V~em~Lhflnky~ImVlqi~Sk~ 314 (537)
T KOG0362|consen 244 AQTETKGTVLLKNAKELLNFSKGEEALLEEQVKAIADAG---------VKVIVSGGKVDEMTLHFLNKYKIMVLQINSKF 314 (537)
T ss_pred ccccCcceeeecCcHhhhhhccccHHHHHHHHHHHHhcC---------CeEEEecCccchhhhhhhccccEEEEEeccHh
Confidence 999999999999999999999999999999999998766 46999999999999999999999999999999
Q ss_pred hHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEE-ccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHHH
Q 009426 323 NMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVE-NVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAV 401 (535)
Q Consensus 323 ~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~-~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~ 401 (535)
||+|+++..||++++++..+.+..+|+|++|+...+|+.+++.|. ++...+..|++|||+++..+|+.||+++|+++..
T Consensus 315 eLrrlcrtvGA~~l~rl~~P~~~~lG~~d~V~~~EiG~~~v~vF~~e~~~~~~~TvVLRgst~s~LDd~ERAVddgV~ty 394 (537)
T KOG0362|consen 315 DLRRLCRTVGATALPRLFPPAPEELGYCDSVSTQEIGDTLVVVFRWESTGTRVATVVLRGATQSILDDAERAVDDGVNTY 394 (537)
T ss_pred hHHHHHHHcCCccchhccCCCCccccccceeeeeecCCceEEEEeeccCCCceeEEEEcccchhhHHHHHHHHHHhHHHh
Confidence 999999999999999999999999999999999999999998775 4446789999999999999999999999999999
Q ss_pred HHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeee
Q 009426 402 KNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVG 481 (535)
Q Consensus 402 ~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~G 481 (535)
+...++++++||+|++|++|++.| .++.+..++..|++++.||+||+.+|++|++|+|++..+++.+++..|+.+.+.|
T Consensus 395 K~l~~d~rLlpGagatEieLak~i-~~~g~~~~Gl~q~Aik~fa~Ale~~PktlaEnagl~~~evia~ly~~h~~g~~~g 473 (537)
T KOG0362|consen 395 KALCSDSRLLPGAGATEIELAKQI-SSRGATLPGLKQLAIKKFAEALEVLPKTLAENAGLAVTEVIAKLYAVHQGGKNLG 473 (537)
T ss_pred hhhccCCccccCCchhHHHHHHHH-HHhcccCCCcchhHHHHHHHHhccccHhHHHhcCCcHHHHHHHHHHhhcCCCcce
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999998667789
Q ss_pred EecCCC-CccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCccCC
Q 009426 482 LNQHSG-DPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMR 532 (535)
Q Consensus 482 id~~~g-~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~~~~ 532 (535)
+|+.-. ...|+.+.||||.+..|.++++.|+|+|+++|++|+||+++++++
T Consensus 474 ~di~~e~~~~d~~~~~i~D~~~~K~~a~k~at~aa~tvl~vDqiimak~agg 525 (537)
T KOG0362|consen 474 MDIEAEGGTIDVREEGIWDTLAVKAQAIKLATEAALTVLTVDQIIMAKKAGG 525 (537)
T ss_pred eeeeccccccChhhhchHHHHHHHHHHHHHHHhhhheeeehhheeEecccCC
Confidence 998876 589999999999999999999999999999999999999998654
No 34
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=100.00 E-value=5.3e-87 Score=713.79 Aligned_cols=456 Identities=24% Similarity=0.355 Sum_probs=410.5
Q ss_pred hcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccCh----HHHHHHHHHHhhhccc
Q 009426 12 VLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNP----TAIMIARTAVAQDDIS 87 (535)
Q Consensus 12 ~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~~~ 87 (535)
...|.+++..|+.|+.+++++++|||||+||+|||+++.|+++|||||+||+++|++.|| +++++++++++|++++
T Consensus 4 ~~~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~akll~~~a~~qd~e~ 83 (524)
T TIGR02348 4 IKFDEEARKALLRGVDKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDKFENMGAQLVKEVASKTNDVA 83 (524)
T ss_pred ccccHHHHHHHHHHHHHHHHHhccCcCCCCCcEEEECCCCCeeEeccHHHHHHHccCCChhhHHHHHHHHHHHHccCcee
Confidence 345789999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccch
Q 009426 88 GDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESL 167 (535)
Q Consensus 88 GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~ 167 (535)
||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++ +.+.+.++|+|+.++
T Consensus 84 GDGTTtvviLa~~Ll~~a~~li~~GihP~~Ii~G~~~A~~~~l~~L~~~s~~~~-----~~~~l~~va~ts~~~------ 152 (524)
T TIGR02348 84 GDGTTTATVLAQAIVKEGLKNVAAGANPIELKRGIEKAVEAAVEELKKLSKPVK-----GKKEIAQVATISANN------ 152 (524)
T ss_pred CCCcchHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCC-----CHHHHHHHHHHhccC------
Confidence 999999999999999999999999999999999999999999999999999986 778899999998753
Q ss_pred HHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcc-cccEEEEEEEEeecCCCCCC-------cccccCceeEeeccc
Q 009426 168 ADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFD-VDTRLVEGLVLDHGSRHPDM-------KRRAENCYILTCNVS 239 (535)
Q Consensus 168 ~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~-~~s~li~Givl~~~~~~~~~-------~~~~~n~kIll~~~~ 239 (535)
.+++++++++|+..+.+. +.+ .+.. |+.. +++++++|++|++++.+|.| ++.++||+|++++++
T Consensus 153 ~~~l~~lv~~A~~~v~~~-~~i-----~v~~--g~~~~~~s~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~ 224 (524)
T TIGR02348 153 DEEIGSLIAEAMEKVGKD-GVI-----TVEE--SKSLETELEVVEGMQFDRGYISPYFVTDAEKMEVELENPYILITDKK 224 (524)
T ss_pred hHHHHHHHHHHHHHhCcC-CcE-----eeec--CCCccccEEEEEeEEEcCCCCCcccccCccCCeEEeeCceeeeccCC
Confidence 578999999999988643 223 3332 4444 78999999999999999975 788999999999997
Q ss_pred cccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHc------Cc
Q 009426 240 LEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARA------GI 313 (535)
Q Consensus 240 Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~------~I 313 (535)
++ +++++ ...++++.+.+ .++|+++++|++.++++|..+ ||
T Consensus 225 i~-------------~~~~i-----------~~~l~~i~~~g---------~~lvi~~~~i~~~al~~l~~n~~~~~~~i 271 (524)
T TIGR02348 225 IS-------------NIKDL-----------LPLLEKVAQSG---------KPLLIIAEDVEGEALATLVVNKLRGTLNV 271 (524)
T ss_pred cC-------------CHHHH-----------HHHHHHHHHhC---------cCEEEECCCCChHHHHHHHHhhcccccce
Confidence 63 34333 34566676555 247788899999999999987 88
Q ss_pred eEEEecCh-----hhHHHHHHHhCCEEec-----ccCCCCCCCCcccceEEEEEECceEEEEEEccCCCC----------
Q 009426 314 IALRRAKR-----RNMERLVLACGGEAVN-----SVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPH---------- 373 (535)
Q Consensus 314 ~~v~~v~~-----~~l~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~---------- 373 (535)
+++++++. ++++|||++|||++++ ++++++++++|+|+.|++. .++|+++++++.++
T Consensus 272 ~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v~~~---~~~~~~i~~~~~~~~~~~ri~~l~ 348 (524)
T TIGR02348 272 CAVKAPGFGDRRKAMLEDIAILTGGQVISEELGLKLEEVTLDDLGKAKKVTVD---KDNTTIVEGAGDKAAIKARVAQIK 348 (524)
T ss_pred EEEECCCccchhhhhHHHHHHHhCCEEecccccCCcCcCCHHHCCCceEEEEe---ecEEEEEcCCCCHHHHHHHHHHHH
Confidence 99998854 7999999999999999 8999999999999999854 47889998876544
Q ss_pred -------------------------eeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHHHHHHH
Q 009426 374 -------------------------SCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNE 428 (535)
Q Consensus 374 -------------------------~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~ 428 (535)
.+||+|||+|+.+++|++|+++||++++++++++| +|||||++|++++.+| ++
T Consensus 349 ~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~Dal~~~r~a~~~g-~VpGGGa~e~~~s~~L-~~ 426 (524)
T TIGR02348 349 AQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATETEMKEKKLRVEDALNATRAAVEEG-IVPGGGVALLRAAAAL-EG 426 (524)
T ss_pred HHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-CccCCcHHHHHHHHHH-HH
Confidence 68999999999999999999999999999999997 9999999999999999 77
Q ss_pred HhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHHHHHHH
Q 009426 429 VKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQII 508 (535)
Q Consensus 429 ~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l 508 (535)
..+.++++++++++|++||+.||++|++|||+|+.+++.+|+.. .+ ++|||+.+|++.||++.|||||+.||.++|
T Consensus 427 -~~~~~~~~~~~~~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~--~~-~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al 502 (524)
T TIGR02348 427 -LKGDNEDEAIGIDIVKRALEAPLRQIAENAGKDGAVVAEKVKES--KG-NFGFNAATGEYEDLVEAGIIDPTKVTRSAL 502 (524)
T ss_pred -hccCChHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhc--CC-CeeEeCcCCcccchhhccCEEcHHHHHHHH
Confidence 66788999999999999999999999999999999999999865 23 489999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHhhcC
Q 009426 509 NSGPVIASQLLLVDEVIRAG 528 (535)
Q Consensus 509 ~~A~e~a~~iL~iD~ii~~~ 528 (535)
++|+++|++||+||++|...
T Consensus 503 ~~A~~~a~~iL~id~ii~~~ 522 (524)
T TIGR02348 503 QNAASIAGLLLTTEAVVADK 522 (524)
T ss_pred HHHHHHHHHHHhHHHHhhcC
Confidence 99999999999999999764
No 35
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=4.9e-87 Score=717.24 Aligned_cols=459 Identities=22% Similarity=0.351 Sum_probs=413.1
Q ss_pred hcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccc----cChHHHHHHHHHHhhhccc
Q 009426 12 VLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQI----QNPTAIMIARTAVAQDDIS 87 (535)
Q Consensus 12 ~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~----~hP~a~ll~~~~~~~~~~~ 87 (535)
...|.+++..|+.++..+++++++||||+||+|||+++.|+++|||||+||+++|++ +||+|+++++++++|++++
T Consensus 6 ~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~iTnDG~TIlk~i~~~~~~~~p~akll~e~a~~q~~e~ 85 (545)
T PRK12852 6 VKFSGDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDLA 85 (545)
T ss_pred hhccHHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCcccChHHHHHHHHHhhcCcee
Confidence 445679999999999999999999999999999999999999999999999999999 5999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccch
Q 009426 88 GDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESL 167 (535)
Q Consensus 88 GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~ 167 (535)
||||||+++|+++||+++.+++++|+||..|++||+.|++.++++|+++++|++ +.+.+.++|+++.++
T Consensus 86 GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~-----~~~~l~~va~~s~~~------ 154 (545)
T PRK12852 86 GDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDIAVAAVVKDIEKRAKPVA-----SSAEIAQVGTISANG------ 154 (545)
T ss_pred cCCcchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC-----CHHHHHHHHhhhcCC------
Confidence 999999999999999999999999999999999999999999999999999986 566799999998865
Q ss_pred HHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcc-cccEEEEEEEEeecCCCCC-------CcccccCceeEeeccc
Q 009426 168 ADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFD-VDTRLVEGLVLDHGSRHPD-------MKRRAENCYILTCNVS 239 (535)
Q Consensus 168 ~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~-~~s~li~Givl~~~~~~~~-------~~~~~~n~kIll~~~~ 239 (535)
.+.+++++++|+..+.+. +.++++. |+.. +++++++|+.|++++.+|+ |+..++||+|+++++.
T Consensus 155 ~~~l~~li~eA~~~vg~~-g~i~v~~-------g~~~~~~~~~v~G~~~~~g~~~p~~v~~~~~~~~~l~n~~Ili~d~~ 226 (545)
T PRK12852 155 DAAIGKMIAQAMQKVGNE-GVITVEE-------NKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTVELDDAYILLHEKK 226 (545)
T ss_pred hHHHHHHHHHHHHHhccC-Cceeeec-------CCCcceEEEEEEeEEecCCccCCccccccccceEEecCceEEEecCc
Confidence 478999999999998653 2344332 6664 7999999999999999985 7889999999999986
Q ss_pred cccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHc------Cc
Q 009426 240 LEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARA------GI 313 (535)
Q Consensus 240 Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~------~I 313 (535)
+. +++ .+...++.+.+.+ ..++|++++|++.++++|..+ +|
T Consensus 227 i~-------------~~~-----------~i~~~l~~i~~~g---------~~lvI~~~~i~~~al~~l~~nk~~~~~~i 273 (545)
T PRK12852 227 LS-------------GLQ-----------AMLPVLEAVVQSG---------KPLLIIAEDVEGEALATLVVNRLRGGLKV 273 (545)
T ss_pred cC-------------CHH-----------HHHHHHHHHHHhC---------cCEEEECCCCcHHHHHHHHHhcccccceE
Confidence 52 222 3334566676554 236777889999999999886 79
Q ss_pred eEEEecC-----hhhHHHHHHHhCCEEec-----ccCCCCCCCCcccceEEEEEECceEEEEEEccCCC-----------
Q 009426 314 IALRRAK-----RRNMERLVLACGGEAVN-----SVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNP----------- 372 (535)
Q Consensus 314 ~~v~~v~-----~~~l~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~----------- 372 (535)
+++++.+ +++|+|||.+|||++++ ++++++++++|+|+.+++.. ++++++.++..+
T Consensus 274 ~av~~~~~~~~r~~~l~~ia~~tGa~~i~~~~~~~l~~~~~~~lG~~~~v~~~~---~~~~~i~~~~~~~~i~~ri~~l~ 350 (545)
T PRK12852 274 AAVKAPGFGDRRKAMLEDIAILTGGQLISEDLGIKLENVTLKMLGRAKKVVIDK---ENTTIVNGAGKKADIEARVGQIK 350 (545)
T ss_pred EEEecCCcccchHhHHHHHHHhcCCEEEecCcCCCcCCCCHHHCCCCcEEEEEc---cEEEEEeCCCCHHHHHHHHHHHH
Confidence 9999776 88999999999999999 68999989999999998544 788889887653
Q ss_pred ------------------------CeeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHHHHHHH
Q 009426 373 ------------------------HSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNE 428 (535)
Q Consensus 373 ------------------------~~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~ 428 (535)
+.+||+|||+|+.+++|++|+++||++++++++++| +|||||++|++++.+| .+
T Consensus 351 ~~~~~~~~~~~~~~l~~R~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~a~~~a~~~g-~VpGGGa~e~~~s~~L-~~ 428 (545)
T PRK12852 351 AQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEG-IVPGGGVALLRAKKAV-GR 428 (545)
T ss_pred HHHHhcccHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhcC-CCcCchHHHHHHHHHH-HH
Confidence 789999999999999999999999999999999997 9999999999999999 88
Q ss_pred HhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHHHHHHH
Q 009426 429 VKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQII 508 (535)
Q Consensus 429 ~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l 508 (535)
++.. ++++|+++++|++||+.||++|++|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.+|.++|
T Consensus 429 ~~~~-~~~~q~~i~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~--~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al 505 (545)
T PRK12852 429 INND-NADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENK--SETFGFDAQTEEYVDMVAKGIIDPAKVVRTAL 505 (545)
T ss_pred hhcC-CcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc--CCCeeEeCcCCCcccHHhCcCCcChHHHHHHH
Confidence 8866 78899999999999999999999999999999999998877 46799999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHhhcCcc
Q 009426 509 NSGPVIASQLLLVDEVIRAGRN 530 (535)
Q Consensus 509 ~~A~e~a~~iL~iD~ii~~~~~ 530 (535)
+.|+|+|++||+||++|..++.
T Consensus 506 ~~A~e~a~~iL~id~iI~~~~~ 527 (545)
T PRK12852 506 QDAASVAGLLVTTEAMVAELPK 527 (545)
T ss_pred HHHHHHHHHHHhHHHHhhcCCC
Confidence 9999999999999999987653
No 36
>KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-89 Score=672.39 Aligned_cols=509 Identities=28% Similarity=0.480 Sum_probs=479.9
Q ss_pred hhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhhcccCC
Q 009426 10 AEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGD 89 (535)
Q Consensus 10 ~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 89 (535)
.++..|..++-.|..|+..+++++++||||-|++||++++.|++.+||||+|||+.+.++||++|++++.++.|++++||
T Consensus 12 ge~~sg~~vr~qnv~a~~~i~nivkss~GPvGldKmlvdd~Gdvt~TndgAtiL~~l~V~HPa~KiLvelaq~qd~evgD 91 (545)
T KOG0360|consen 12 GERLSGERVRTQNVMAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILSLLEVEHPAAKVLVELAQLQDEEVGD 91 (545)
T ss_pred CCcccchhhhhhhhHHHHHHHHHHHhccCccchhhhccccccceEEeccHHHHHHhhhhcchHHHHHHHHHHhccccccC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhh-ccccccCCCCCCHHHHHHHHHHhhccccccchH
Q 009426 90 GTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEK-FKTPVVMGDEPDKEILKMVARTTLRTKLYESLA 168 (535)
Q Consensus 90 Gttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~-~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~~ 168 (535)
|||++++++++|++++.+|+..++||..|++||+.|...+++++++ ++.|++ ...++.|.++++|++++|+.....
T Consensus 92 gttsvviia~eLl~~a~~Lv~~~ihpt~ii~gyr~ac~e~~k~i~~~~~~~vd---~lg~~~Lin~~ktsmsSK~i~~ds 168 (545)
T KOG0360|consen 92 GTTSVVIIAAELLKNADELVKTKIHPTRIISGYRLACIEAVKYITEGLSKPVD---SLGTQILINLAKTSMSSKIIGMDS 168 (545)
T ss_pred CceEEEEEEHHhhhhHHHhhcCCCcceehhhhHHHHHHHHHHHhhccceeehh---hcchHHHHHHHHhhhcceecccch
Confidence 9999999999999999999999999999999999999999999875 577887 678999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcCC--c--cccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeecccccccc
Q 009426 169 DQLTDIVVNAVLCIRKP--E--EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEK 244 (535)
Q Consensus 169 ~~ls~l~~~a~~~v~~~--~--~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~~~ 244 (535)
++|++++++|+..++-- + ....++.++|.|.+|.+.-||.+++|+.++...++..||..+.|+||+++++.|...+
T Consensus 169 ~~f~~~Vvda~l~v~~~~~~ge~~ypi~~vnILkahG~s~~eS~l~~GyaLnc~~asq~m~~~i~~~Kiacld~~Lqk~k 248 (545)
T KOG0360|consen 169 DFFTEMVVDALLAVKILDINGEPHYPINSVNILKAHGKSQIESMLLPGYALNCSVASQMMPLRIKNAKIACLDFTLQKTK 248 (545)
T ss_pred HHHHHHHHHHHHHHhhcccCCceeccccceeEEecCCccchhheeecceeeeccHhhhccccccccceeeeEeccccccc
Confidence 99999999999877521 1 2456788999999999999999999999999988889999999999999999999999
Q ss_pred ccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChhhH
Q 009426 245 SEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNM 324 (535)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~~l 324 (535)
.++...+.+.++++++++.+.|..+.++++++|+..+ .++|+++++|||.++.||.++|+++++|+.+++|
T Consensus 249 m~lGv~vvv~dp~kle~ir~~e~~itkeRi~kIl~~g---------anvVLtt~gIddmc~K~~veagamAVrR~~k~dl 319 (545)
T KOG0360|consen 249 MKLGVQVVVDDPEKLEQIRQREQDITKERIKKILATG---------ANVVLTTGGIDDMCLKYFVEAGAMAVRRCKKEDL 319 (545)
T ss_pred ccccceEEEcChHHHHHHHHHHhHhHHHHHHHHHhcC---------CcEEEEcCCccHHHHHHHHHcchhhhHHHHHHHH
Confidence 9999999999999999999999999999999998766 4699999999999999999999999999999999
Q ss_pred HHHHHHhCCEEecccCC------CCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHH
Q 009426 325 ERLVLACGGEAVNSVDD------LTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGL 398 (535)
Q Consensus 325 ~~la~~tGa~ii~~~~~------l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal 398 (535)
++|+++||+++++++.+ +++..+|+|+.|.+..|++++++++.+.+.. .++|++||++++.+||++|++|||+
T Consensus 320 k~iakatGat~~sSla~l~geetf~~~~lG~a~evvqeri~dde~ilikg~ka~-~aSiILrgaNd~~~DEmers~hdaL 398 (545)
T KOG0360|consen 320 KRIAKATGATLLSSLANLEGEETFEPASLGSADEVVQERIGDDELILIKGTKAT-SASIILRGANDFMLDEMERSLHDAL 398 (545)
T ss_pred HHHHHhhCCeeeehhhccccccccChhhccchhHHHHHhcccceeEEeccCccc-eeeEEEecCCcccHhhhccchhhHH
Confidence 99999999999999874 5667899999999999999999999998755 8999999999999999999999999
Q ss_pred HHHHHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhc---
Q 009426 399 RAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHD--- 475 (535)
Q Consensus 399 ~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~--- 475 (535)
|+++..++.+++||||||+|.+|+-|| ++|+.+.+++|++++..|+.||.+||++|+.|++.|+.+++.++|..|+
T Consensus 399 ~VlkrtLes~~vvpGGG~vE~aLs~yl-e~~a~s~~srE~laiaefa~all~ipktla~naa~Dstelvt~lra~Hs~~q 477 (545)
T KOG0360|consen 399 CVLKRTLESKSVVPGGGAVETALSIYL-ENFATSVGSREQLAIAEFAAALLSIPKTLAVNAAKDSTELVTKLRAYHSVSQ 477 (545)
T ss_pred HHHHHHhccCccccCccHHHHHHHHHH-HhhcccCccHHHHHHHHHHHHHhcchHHHhhhhccccccccccccCCchhhc
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999882
Q ss_pred CC------CeeeEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCccCC
Q 009426 476 RG------NIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMR 532 (535)
Q Consensus 476 ~~------~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~~~~ 532 (535)
.+ .++|+|+.+|++.|.++.|+++|..+|...|+.|+|.+..+||+|+.+.-.+...
T Consensus 478 ~~p~~~~~k~~GldL~ng~~~dn~~~g~~ep~~~kvksLk~ateaaitiLriD~li~l~~~~~ 540 (545)
T KOG0360|consen 478 DNPWRLLLKQYGLDLINGKIRDNKSAGSFEPPIVKVKSLKFATEAAITILRIDDLIKLLPELQ 540 (545)
T ss_pred cCCccccchhhCccccccEeecceeeeeeccceeehhhhHHHHHhhhhhcchhhhhhcCcccc
Confidence 11 5799999999999999999999999999999999999999999999998766443
No 37
>KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-89 Score=668.57 Aligned_cols=516 Identities=29% Similarity=0.488 Sum_probs=492.2
Q ss_pred ccCcchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhh
Q 009426 5 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQD 84 (535)
Q Consensus 5 ~~~~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 84 (535)
.+..+..++.|..+...|++|+++++|.+++|+||+.|.||+.++.|.+..||||..||+++++.||+|+-+.+++.+||
T Consensus 7 ~~~~~~~re~g~kvq~~ni~aak~iadvirtclgp~am~kmlld~~g~i~~tndg~ailrei~Vahpaaksmiel~rtqd 86 (527)
T KOG0364|consen 7 VLSKNTKRESGRKVQLGNIQAAKAIADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPAAKSMIELSRTQD 86 (527)
T ss_pred ecccccCcCccccccccchhhHHHHHHHHHHhcChHHHHHHhhccCCceEEecCcHHHHHHHhhcCcchhhHhhhhhccc
Confidence 34556778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccc
Q 009426 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLY 164 (535)
Q Consensus 85 ~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~ 164 (535)
+++||||||+++|++++|.++..++++++||..|+++|.+|++.++..+++.+++++ ..+...+..+.+++..+|+.
T Consensus 87 eevgdgttsvi~lagE~L~~~~~~l~~~~Hp~~i~ka~~~aled~~~~~~~~~~~~d---~~~~~km~~vi~~~v~tk~~ 163 (527)
T KOG0364|consen 87 EEVGDGTTSVIILAGEMLNVAEPFLEEGIHPTVIIKAYIKALEDNIRALDKISIPVD---VKDQAKMLRVINSSVGTKFN 163 (527)
T ss_pred ccccCCceeeeeehHHHhhhcchhhhcCcchHHHHHHHHHHHHHHHHHHHhhcccCC---cccHHHHHhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999999999987 55788899999999999999
Q ss_pred cchHHHHHHHHHHhhhhhcCC-ccccCcc-cEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeecccccc
Q 009426 165 ESLADQLTDIVVNAVLCIRKP-EEAIDLF-MVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEY 242 (535)
Q Consensus 165 ~~~~~~ls~l~~~a~~~v~~~-~~~~~~~-~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~ 242 (535)
..|++.++.++.+|+.++... ++.+|+. +.++.|++||.+.+|++++|+.+.+...||.|++.++||||++++|||+|
T Consensus 164 ~~~~~~~~~lal~avk~V~~~~g~e~dik~y~kveKvpgg~l~~s~vl~Gv~~nkdv~Hpkmrr~IenprivLlD~~Ley 243 (527)
T KOG0364|consen 164 SRWSDLICNLALDAVKTVGVENGREIDIKRYAKVEKVPGGLLEDSCVLKGVMINKDVTHPKMRRAIENPRIVLLDCPLEY 243 (527)
T ss_pred hhhcchhhhHHHHHHHHhhhccCceechhhhccccccCcccccccceecceeeccccCcHHHHHHhhcCcEEEecCCccC
Confidence 999999999999999999754 3468874 78999999999999999999999999999999999999999999999999
Q ss_pred ccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChh
Q 009426 243 EKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRR 322 (535)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~ 322 (535)
.+.+..+.+.+...+++...++.|++++...+..|+.+. |++|+++|+++|.+++||.+.||.+++++++.
T Consensus 244 kkGeSqtnve~~~eed~~r~Lqieee~v~~mc~~Ii~v~---------pDlVitekG~sdla~hyl~k~~iT~~rr~rKt 314 (527)
T KOG0364|consen 244 KKGESQTNVEIVKEEDFTRILQIEEEQVQAMCEVIIAVK---------PDLVITEKGVSDLAQHYLLKANITAIRRLRKT 314 (527)
T ss_pred CCCccccceeeeechhHHHHHHhhHHHHHHHHHHHHeec---------ccEEEeccchhHHHHHHHHhcCchhhhhhhcc
Confidence 999999999999999999999999999999999998765 78999999999999999999999999999999
Q ss_pred hHHHHHHHhCCEEecccCCCCCCCCc-ccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHHH
Q 009426 323 NMERLVLACGGEAVNSVDDLTPGCLG-WAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAV 401 (535)
Q Consensus 323 ~l~~la~~tGa~ii~~~~~l~~~~lG-~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~ 401 (535)
|-.|++++|||+++++.+++.+.+.| -|+.++...+|++.|.||..|+.|+.|||++|||++.+++|.+|.++||+.+.
T Consensus 315 Dn~ria~acga~iv~rpedl~e~dvGt~agLf~~kK~gdeyf~f~~~Ck~pkaCtillrg~skdil~e~ernlqda~~va 394 (527)
T KOG0364|consen 315 DNNRIARACGARIVNRPEDLPERDVGTGAGLFEVKKIGDEYFTFFTDCKEPKACTILLRGPSKDILNEVERNLQDAMGVA 394 (527)
T ss_pred ccchhhhhcCceeccChhhCchhccCcccceeeeeccCchhhhhhhhcCCCcceEEEeccCchhHHHHHHHHhhhHHHHH
Confidence 99999999999999999999999999 68899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCC-Cee
Q 009426 402 KNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRG-NIV 480 (535)
Q Consensus 402 ~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~-~~~ 480 (535)
|+.+-+|+++||||++||.+++.| .+.+...++-++..+.+.|.||+.+|++|++|+|.+++..++.+++.|+.+ ..+
T Consensus 395 rn~ii~PklvPGGGAtEMAvs~~L-~qksa~~~GVekwPY~Ava~AlEviPrtliqncGan~Ir~lTalr~kh~~G~~~~ 473 (527)
T KOG0364|consen 395 RNVIINPKLVPGGGATEMAVSHEL-RQKSALMTGVEKWPYGAVAGALEVIPRTLIQNCGANPIRALTALRAKHKEGQRVW 473 (527)
T ss_pred HHhccCCcccCCccHHHHHHHHHH-HHHHhhccchhccchhhhhcCceeccHHHHhhcCccHHHHHHHHHHHhcCcceee
Confidence 999999999999999999999999 776667788999999999999999999999999999999999999999765 778
Q ss_pred eEecCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCccCCC
Q 009426 481 GLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRK 533 (535)
Q Consensus 481 Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~~~~~ 533 (535)
|+|..+|.++||.+.++|||..+|.+..+.|+|.++++||||+|+...+..++
T Consensus 474 gi~g~tg~iVDm~~~~iwep~~vK~Q~~ktavesa~~LLRIddIvsg~kk~v~ 526 (527)
T KOG0364|consen 474 GIDGETGVIVDMVELGIWEPEAVKLQTGKTAVESACLLLRIDDIVSGKKKRVE 526 (527)
T ss_pred cccCceeeEeeeeeccccchhhhhhhhhhHHHHHHHHHHhhhceeeeeeeccC
Confidence 99999999999999999999999999999999999999999999998876654
No 38
>CHL00093 groEL chaperonin GroEL
Probab=100.00 E-value=1.2e-85 Score=703.98 Aligned_cols=461 Identities=21% Similarity=0.335 Sum_probs=407.2
Q ss_pred hcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHH----HHHHHHHHhhhccc
Q 009426 12 VLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTA----IMIARTAVAQDDIS 87 (535)
Q Consensus 12 ~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a----~ll~~~~~~~~~~~ 87 (535)
...+.++++.-+.+|..+++++++||||+||+|||+++.|+++|||||+||+++|+++||++ +|+++++++|++++
T Consensus 5 ~~~~~~~~~~~~~g~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~a~~g~~li~~~a~~~~~e~ 84 (529)
T CHL00093 5 ILYQDNARRALERGMDILAEAVSVTLGPKGRNVVLEKKYGSPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDVA 84 (529)
T ss_pred eecCHHHHHHHHHHHHHHHHHHhcccCCCCCcEEEECCCCCeeEeccHHHHHHHccCcCHHHHHHHHHHHHHHHhcCcee
Confidence 34567899999999999999999999999999999999999999999999999999999999 48888999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccch
Q 009426 88 GDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESL 167 (535)
Q Consensus 88 GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~ 167 (535)
||||||++||+++||+++.+++++|+||..|++||+.|.+.+++.|+++++|++ +.+.|.++|+++++ .
T Consensus 85 GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~-----d~~~L~~VA~ts~~------~ 153 (529)
T CHL00093 85 GDGTTTATVLAYAIVKQGMKNVAAGANPISLKRGIEKATQYVVSQIAEYARPVE-----DIQAITQVASISAG------N 153 (529)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCC-----CHHHHHHHHHHhcc------C
Confidence 999999999999999999999999999999999999999999999999999986 78889999999876 4
Q ss_pred HHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCC---cc----cccCceeEeecccc
Q 009426 168 ADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDM---KR----RAENCYILTCNVSL 240 (535)
Q Consensus 168 ~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~---~~----~~~n~kIll~~~~L 240 (535)
.+.|++++++|+..+.+. +.++++ -.++..+++++++|+.|+++|.+|+| ++ .++||+|++++++|
T Consensus 154 ~~~l~~lv~eAv~~vg~~-g~i~~~------~g~~~~~~~~~v~G~~~~~g~~~p~fv~~~k~~~~~l~n~~Ili~d~~l 226 (529)
T CHL00093 154 DEEVGSMIADAIEKVGRE-GVISLE------EGKSTVTELEITEGMRFEKGFISPYFVTDTERMEVVQENPYILLTDKKI 226 (529)
T ss_pred hHHHHHHHHHHHHHhccC-Cceeec------CCCccceeeEEEeeEEecCccCcCccccCCccceEEecCceehhhcCCC
Confidence 678999999999999642 234332 12345678899999999999999965 44 48999999999999
Q ss_pred ccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHH--HH----cCce
Q 009426 241 EYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLL--AR----AGII 314 (535)
Q Consensus 241 e~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l--~~----~~I~ 314 (535)
++.+ ..+...++++.+.+ ..+++++++|++.++..| ++ +||+
T Consensus 227 e~~~-----------------------~~i~~~l~~i~~~~---------~~lvi~~~~i~~~al~~l~l~k~~g~~~i~ 274 (529)
T CHL00093 227 TLVQ-----------------------QDLLPILEQVTKTK---------RPLLIIAEDVEKEALATLVLNKLRGIVNVV 274 (529)
T ss_pred CchH-----------------------HHHHHHHHHHHhcC---------CCEEEEcCCCChHHHHHHHHhhhcccceEE
Confidence 7542 12334566665544 237778889999777766 66 4899
Q ss_pred EEEecCh-----hhHHHHHHHhCCEEec-----ccCCCCCCCCcccceEEEEEECceEEEEEEc---------cCCC---
Q 009426 315 ALRRAKR-----RNMERLVLACGGEAVN-----SVDDLTPGCLGWAGLVYEHVLGEEKYTFVEN---------VKNP--- 372 (535)
Q Consensus 315 ~v~~v~~-----~~l~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~---------~~~~--- 372 (535)
++++++. ++|+|||.+|||++++ ++++++++++|+|+.|++. .++++++++ |+..
T Consensus 275 avr~~~~~~~~k~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~~~~v~~~---~~~~~~~~~~~~~~i~~~~~~~~~~ 351 (529)
T CHL00093 275 AVRAPGFGDRRKAMLEDIAILTGGQVITEDAGLSLETIQLDLLGQARRIIVT---KDSTTIIADGNEEQVKARCEQLRKQ 351 (529)
T ss_pred EEecCCCCcchHHHHHHHHHhhCCEEecccccCCcCCCCHHHCCcceEEEEe---cCEEEEEecCcHHHHHHHHHHHHHH
Confidence 9999854 7899999999999999 7999999999999999954 478888863 2221
Q ss_pred ----------------------CeeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHHHHHHHHh
Q 009426 373 ----------------------HSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVK 430 (535)
Q Consensus 373 ----------------------~~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~ 430 (535)
..+||+|||+|+.+++|++|+++||++++++++++| +|||||++|++++.+| ++++
T Consensus 352 ~~~~~~~~~~~~l~eR~~~l~g~~~~I~irg~t~~~l~E~er~i~DAl~a~r~a~~~g-vVpGGGa~e~~~s~~L-~~~~ 429 (529)
T CHL00093 352 IEIADSSYEKEKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEG-IVPGGGATLVHLSENL-KTWA 429 (529)
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHHcC-cccCCcHHHHHHHHHH-HHHh
Confidence 378899999999999999999999999999999997 9999999999999999 8887
Q ss_pred c-ccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHHHHHHHH
Q 009426 431 K-TVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIIN 509 (535)
Q Consensus 431 ~-~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~ 509 (535)
. +.++++++++++|++||+.||++|++|||+|+.+++.+++.. +.++|||+.+|++.||++.|||||+.||.++|+
T Consensus 430 ~~~~~g~~~~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~---~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~ 506 (529)
T CHL00093 430 KNNLKEDELIGALIVARAILAPLKRIAENAGKNGSVIIEKVQEQ---DFEIGYNAANNKFVNMYEAGIIDPAKVTRSALQ 506 (529)
T ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHcc---CCCEeEECCCCcccchHhccCEEcHHHHHHHHH
Confidence 6 789999999999999999999999999999999999999754 357999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHhhcCcc
Q 009426 510 SGPVIASQLLLVDEVIRAGRN 530 (535)
Q Consensus 510 ~A~e~a~~iL~iD~ii~~~~~ 530 (535)
.|+|+|++||+||++|...+.
T Consensus 507 ~A~e~a~~iL~id~ii~~~~~ 527 (529)
T CHL00093 507 NAASIASMILTTECIIVDKKE 527 (529)
T ss_pred HHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999998763
No 39
>PRK14104 chaperonin GroEL; Provisional
Probab=100.00 E-value=2.7e-85 Score=701.39 Aligned_cols=459 Identities=22% Similarity=0.348 Sum_probs=412.2
Q ss_pred hcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhcccc----ChHHHHHHHHHHhhhccc
Q 009426 12 VLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQDDIS 87 (535)
Q Consensus 12 ~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~----hP~a~ll~~~~~~~~~~~ 87 (535)
...|.+++..|+.|+..+++++++||||+||+|||+++.|+++|||||+||+++|+++ ||+++|+++++++|++++
T Consensus 6 ~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~d~~~~pgakll~e~a~~qd~e~ 85 (546)
T PRK14104 6 VKFGVDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSADAA 85 (546)
T ss_pred ecchHHHHHHHHHHHHHHHHHHhhccCCCCCceEEEcCCCCeeEeccHHHHHHHhcCCCcccChHHHHHHHHHHhhcccc
Confidence 4557899999999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccch
Q 009426 88 GDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESL 167 (535)
Q Consensus 88 GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~ 167 (535)
||||||+|+|+++||+++.+++++|+||..|++||++|.+.+++.|+++++|++ +.+.+.++|+++.+++
T Consensus 86 GDGTTTvvvLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~v~-----~~~~l~~va~~s~~~d----- 155 (546)
T PRK14104 86 GDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVT-----SNDEIAQVGTISANGD----- 155 (546)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHhcccCC-----CHHHHHHHHHHHhcCc-----
Confidence 999999999999999999999999999999999999999999999999999986 4567999999988765
Q ss_pred HHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCC-------cccccCceeEeecccc
Q 009426 168 ADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDM-------KRRAENCYILTCNVSL 240 (535)
Q Consensus 168 ~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~-------~~~~~n~kIll~~~~L 240 (535)
+.+++++++|+..+.+. +.++++.+ +...+++++++|++|+++|.+|+| +..++||+|++++..+
T Consensus 156 -~~i~~lv~~Av~~vg~~-g~i~v~~~------~~~~~~~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~~~~Ilv~d~~i 227 (546)
T PRK14104 156 -AEIGKFLADAMKKVGNE-GVITVEEA------KSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAYILINEKKL 227 (546)
T ss_pred -hHHHHHHHHHHHHhccC-CceeeEec------ccccceEEEEEEEEEeCCCCCcchhcCcccCceeeeCcEEEEehhhh
Confidence 56999999999988643 23444332 233368999999999999999966 6778899999998554
Q ss_pred ccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHH------cCce
Q 009426 241 EYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLAR------AGII 314 (535)
Q Consensus 241 e~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~------~~I~ 314 (535)
.++++ +...++.+.+.+ ..|+|++++|++.++++|.. .+|+
T Consensus 228 -------------~~~~~-----------i~~~l~~i~~~g---------~~lvI~~~~i~~~al~~l~~Nk~~~~~~i~ 274 (546)
T PRK14104 228 -------------SSLNE-----------LLPLLEAVVQTG---------KPLVIVAEDVEGEALATLVVNRLRGGLKVA 274 (546)
T ss_pred -------------cCHHH-----------HHHHHHHHHHhC---------cCEEEECCCCcHHHHHHHHhCcccceeeEE
Confidence 33333 334567776655 23778899999999999985 4789
Q ss_pred EEEecC-----hhhHHHHHHHhCCEEecc-----cCCCCCCCCcccceEEEEEECceEEEEEEccCCC------------
Q 009426 315 ALRRAK-----RRNMERLVLACGGEAVNS-----VDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNP------------ 372 (535)
Q Consensus 315 ~v~~v~-----~~~l~~la~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~------------ 372 (535)
++++++ +++|+|||.+|||+++++ +++++++++|+|+.++ +++++++++.+++.+
T Consensus 275 av~~~~~g~~r~~~l~~ia~~tG~~~i~~~~~~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~ 351 (546)
T PRK14104 275 AVKAPGFGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLQMLGRAKKVM---IDKENTTIVNGAGKKADIEARVAQIKA 351 (546)
T ss_pred EEeccCCCcchHHHHHHHHHHhCCEEEecCCCCCcCcCCHHHCCceeEEE---EcCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 998887 789999999999999999 8999999999999998 688899999988765
Q ss_pred -----------------------CeeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHHHHHHHH
Q 009426 373 -----------------------HSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEV 429 (535)
Q Consensus 373 -----------------------~~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~ 429 (535)
+.+||+|||+|+.+++|++|+++||++++++++++| +|||||++|++++.+| +++
T Consensus 352 ~~~~~~~~~~~~~l~eRi~~l~~~~atI~irG~t~~~l~e~~r~i~Dal~a~~~ai~~g-~VpGGGa~e~~~s~~L-~~~ 429 (546)
T PRK14104 352 QIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEG-IVPGGGVALLRASEQL-KGI 429 (546)
T ss_pred HHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cCcCchHHHHHHHHHH-HHh
Confidence 889999999999999999999999999999999997 9999999999999999 877
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHHHHHHHH
Q 009426 430 KKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIIN 509 (535)
Q Consensus 430 ~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~ 509 (535)
. ..++++++++++|++||+.||++|++|||+|+.+++.+++..| ..++|+|+.+|++.||++.|||||+.||.++|+
T Consensus 430 ~-~~~~~~~~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~--~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~ 506 (546)
T PRK14104 430 K-TKNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKE--QYSYGFDSQTGEYGNLVSKGIIDPTKVVRTAIQ 506 (546)
T ss_pred h-cCChHHHHHHHHHHHHHHhhHHHHHHhCCCCHHHHHHHHHhcC--CCcEeEeCCCCceeehHhcCCEEcHHHHHHHHH
Confidence 4 4578999999999999999999999999999999999998754 457999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHhhcCc
Q 009426 510 SGPVIASQLLLVDEVIRAGR 529 (535)
Q Consensus 510 ~A~e~a~~iL~iD~ii~~~~ 529 (535)
+|+++|++||+||++|...+
T Consensus 507 ~A~~~a~~iL~id~~I~~~~ 526 (546)
T PRK14104 507 NAASVAALLITTEAMVAELP 526 (546)
T ss_pred HHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999997765
No 40
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=100.00 E-value=1.3e-83 Score=691.70 Aligned_cols=462 Identities=24% Similarity=0.359 Sum_probs=406.9
Q ss_pred cchH--HHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccCh----HHHHHHHHHHhhhcc
Q 009426 13 LNKS--AALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNP----TAIMIARTAVAQDDI 86 (535)
Q Consensus 13 ~~~~--~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~~ 86 (535)
..|. +++..-+.++..+++++++||||+||+|||+++.|+++|||||+||+|+|++.|| +|+|+++++++|+++
T Consensus 60 ~~~~~~~ar~~l~~g~~~la~~vktTLGP~G~~kmi~~~~G~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~e 139 (600)
T PLN03167 60 HFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDL 139 (600)
T ss_pred ecCCcHHHHHHHHHHHHHHHHHHhccCCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCchhhHHHHHHHHHHHhhhhh
Confidence 3455 7999999999999999999999999999999999999999999999999999999 599999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccc
Q 009426 87 SGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYES 166 (535)
Q Consensus 87 ~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~ 166 (535)
+||||||++||+++||+++.++++.|+||..|++||+.|.+.+++.|++++.|++ + +.|.++|+++++++
T Consensus 140 vGDGTTTvvVLa~~LL~ea~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~s~~v~-----d-~~L~~vA~tS~~~~---- 209 (600)
T PLN03167 140 AGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVKELKKMSKEVE-----D-SELADVAAVSAGNN---- 209 (600)
T ss_pred hCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC-----H-HHHHHHHHHhccCc----
Confidence 9999999999999999999999999999999999999999999999999999885 4 57999999998753
Q ss_pred hHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCccccc-EEEEEEEEeecCCCC-------CCcccccCceeEeecc
Q 009426 167 LADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDT-RLVEGLVLDHGSRHP-------DMKRRAENCYILTCNV 238 (535)
Q Consensus 167 ~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s-~li~Givl~~~~~~~-------~~~~~~~n~kIll~~~ 238 (535)
+.|++++++|+..+.+. +.++++ .|++.+|+ ++++|++|+++|.+| .|+++++||+|+++++
T Consensus 210 --~~i~~liaeAv~~Vg~~-g~i~v~-------~g~s~~dsl~~v~G~~~d~g~~spyfvt~~~~m~~~l~np~Ill~d~ 279 (600)
T PLN03167 210 --YEVGNMIAEAMSKVGRK-GVVTLE-------EGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDK 279 (600)
T ss_pred --HHHHHHHHHHHHHhccC-CcEEec-------cCCCccceeEEEEEEEecCCccCcccccCcCCCeEEEeCCEEEEEcc
Confidence 47999999999999642 223322 57888887 999999999999999 6789999999999998
Q ss_pred ccccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHH------HcC
Q 009426 239 SLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLA------RAG 312 (535)
Q Consensus 239 ~Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~------~~~ 312 (535)
.+ ++++++.+++ +++.+.+ ..++++.++|++.++++|. ..+
T Consensus 280 ~i-------------~~~~~l~~~l-----------e~i~~~g---------~~lvI~a~~I~~~aL~~L~~nkl~g~~~ 326 (600)
T PLN03167 280 KI-------------TNARDLIGIL-----------EDAIRGG---------YPLLIIAEDIEQEALATLVVNKLRGSLK 326 (600)
T ss_pred cc-------------CCHHHHHHHH-----------HHHHHhC---------cCEEEEcCCCCHHHHHHHHHhhccccce
Confidence 65 4566665543 3343333 2377778899999999998 668
Q ss_pred ceEEEecC-----hhhHHHHHHHhCCEEec-----ccCCCCCCCCcccceEEEEE-----ECc--------eEEEEEEcc
Q 009426 313 IIALRRAK-----RRNMERLVLACGGEAVN-----SVDDLTPGCLGWAGLVYEHV-----LGE--------EKYTFVENV 369 (535)
Q Consensus 313 I~~v~~v~-----~~~l~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~-----i~~--------~~~~~~~~~ 369 (535)
|+++++.+ +++|+|||.+|||++++ ++++++++++|+|+.|++.. +|+ +++.+++++
T Consensus 327 i~aVk~p~~g~~~~~~L~dia~~tGa~~i~~~~~~~l~~~~~~~LG~a~~v~~~~~~t~iig~~~~~~~i~~r~~~i~~~ 406 (600)
T PLN03167 327 IAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKVGKEVLGTAAKVVLTKDTTTIVGDGSTQEAVNKRVAQIKNL 406 (600)
T ss_pred EEEEEcccCCcchHHHHHHHHHhhCCEEecccccCCcccCCHHHCceeeEEEEecccceeeCCCccHHHHHHHHHHHHhh
Confidence 99999985 78999999999999999 68888889999999999876 665 366666654
Q ss_pred C------------C------CCeeEEE-ecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHHHHHHHHh
Q 009426 370 K------------N------PHSCTIL-IKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVK 430 (535)
Q Consensus 370 ~------------~------~~~~TI~-i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~ 430 (535)
. + +..+|++ |||+|+.+++|++|+++||++++++++++| +|||||++|++++.+| ++++
T Consensus 407 ~~~~~~~~~~~~l~~Ri~~l~g~~aiI~vgG~t~~~l~E~er~i~DAl~avk~ai~~g-vVpGGGa~el~ls~~L-~~~~ 484 (600)
T PLN03167 407 IEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLASKV-DAIK 484 (600)
T ss_pred hhccCCHHHHHHHHHHHhhcCCcEEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHhcC-CCccHHHHHHHHHHHH-HHHH
Confidence 3 0 1245665 999999999999999999999999999999 9999999999999999 8888
Q ss_pred cccchhHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHHHHHHHH
Q 009426 431 KTVEGRAQL-GVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIIN 509 (535)
Q Consensus 431 ~~~~~~~~~-~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~ 509 (535)
...++++|+ ++++|++||+.||++|++|||+|+.+++.+|++.+ +.++|||+.+|++.||++.|||||+.||+++|+
T Consensus 485 ~~~~~~eq~~g~~~~~~Al~~p~r~La~NAG~d~~~vv~~L~~~~--~~~~G~d~~~g~~~dm~~~GI~Dp~~Vk~~al~ 562 (600)
T PLN03167 485 DTLENDEQKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSND--NPKFGYNAATGKYEDLMAAGIIDPTKVVRCCLE 562 (600)
T ss_pred hcCCChhHHHHHHHHHHHHhcchhhhhhcCCCCHHHHHHHHHhcC--CCCEeEeCCCCcCcchHhccCeecHHHHHHHHH
Confidence 777777775 59999999999999999999999999999997543 467999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHhhcCccC
Q 009426 510 SGPVIASQLLLVDEVIRAGRNM 531 (535)
Q Consensus 510 ~A~e~a~~iL~iD~ii~~~~~~ 531 (535)
.|+++|++||+||++|...+..
T Consensus 563 ~A~~~A~~iL~iD~iI~~~~~~ 584 (600)
T PLN03167 563 HAASVAKTFLTSDCVVVEIKEP 584 (600)
T ss_pred HHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999986543
No 41
>KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-71 Score=523.15 Aligned_cols=375 Identities=32% Similarity=0.504 Sum_probs=352.7
Q ss_pred cchhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccChHHHHHHHHHHhhhccc
Q 009426 8 PNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDIS 87 (535)
Q Consensus 8 ~~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~ 87 (535)
++..+..|.++.++|+.|..+++.++++|+||+|++||++.+.|++++|||| .|++++++...+..|+.++
T Consensus 19 d~~~Ri~G~ea~Ks~I~agkaVA~~lrtSLGPkGlDK~l~~pdgditvtndg---------d~~IakLmv~LS~sqd~eI 89 (400)
T KOG0357|consen 19 ERKDRLFGLDAVKSHIGAAKAVARILRTSLGPKGLDKMLVSPDGDITVTNDG---------VHQIAKLIVILSKSQDDEI 89 (400)
T ss_pred cCCchhhHHHHhhhhhHHHHHHHHHHHhhcCccccccccccCCCCceeeecc---------chHHHHHHHHhcccchhhh
Confidence 3556789999999999999999999999999999999999999999999999 7899999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccccccch
Q 009426 88 GDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESL 167 (535)
Q Consensus 88 GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~~~ 167 (535)
|||||.+++|++.+++++.+++.+|+||..|.+||..+.+.+.+.|++++-++ .
T Consensus 90 gdGtTgVvvLa~alleqa~~li~~~ihpiki~~g~e~~~~~av~~l~~i~~~~------e-------------------- 143 (400)
T KOG0357|consen 90 GDGTTGVVVLAGALLEQAHELIDRGIHPIKIAQGYEKAKVVAVEHLDEISDPF------E-------------------- 143 (400)
T ss_pred ccCCcccEEecccchHhHHhhcccccchhHHHHhhhhHHHhhhhhhhhhcccc------c--------------------
Confidence 99999999999999999999999999999999999999999988887665443 0
Q ss_pred HHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeeccccccccccc
Q 009426 168 ADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEV 247 (535)
Q Consensus 168 ~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~Le~~~~~~ 247 (535)
T Consensus 144 -------------------------------------------------------------------------------- 143 (400)
T KOG0357|consen 144 -------------------------------------------------------------------------------- 143 (400)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecChhhHHHH
Q 009426 248 NAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNMERL 327 (535)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~~l~~l 327 (535)
+.++++++.+.+ .++++|||++||+|.++|.+||..+++||.-.++|.|
T Consensus 144 ----------------------f~emi~~vK~~g---------a~l~icqwgfddeanhll~~n~lpavrwVGGpEiEli 192 (400)
T KOG0357|consen 144 ----------------------FEEMIQQIKETG---------ANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELI 192 (400)
T ss_pred ----------------------HHHHHHHHHhhC---------CcEEEEecccCchhhhHHhhcCCCceeecCCcceEEE
Confidence 114567776666 4699999999999999999999999999999999999
Q ss_pred HHHhCCEEecccCCCCCCCCcccceEEEEEEC--ceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHHhHHHHHHHHh
Q 009426 328 VLACGGEAVNSVDDLTPGCLGWAGLVYEHVLG--EEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTI 405 (535)
Q Consensus 328 a~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~--~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~ 405 (535)
|.+||++|+++|++++++++|+|+.|+|..+| .++++.+++|++++.+||.+||+++.+++|.+|++|||||++|+++
T Consensus 193 AiaT~grIVprF~eL~~~kLG~aglVrE~sfgttkdkmlviEqc~nskaVTifvRg~Nkmii~EakrslhdalCvirnli 272 (400)
T KOG0357|consen 193 AIATGGRIVPRFSELTAEKLGFAGLVREISFGTTKDKMLVIEQCKNSKAVTIFVRGGNKMIIEEAKRSLHDALCVIRNLI 272 (400)
T ss_pred EeecCCeeeccHhhhCHhhccccceEEEEecccccceEEEEEecCCCceEEEEEecCcceeHHHHHHHhhhhHHHHHHHh
Confidence 99999999999999999999999999999997 4789999999999999999999999999999999999999999999
Q ss_pred hcCccccCCchhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhh--cCCCeeeEe
Q 009426 406 EDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH--DRGNIVGLN 483 (535)
Q Consensus 406 ~~~~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~--~~~~~~Gid 483 (535)
+|.++|+|||++|+.||-++ .+-++++++.+||++++||+||++||..|++|||++|++.++++++.+ ..+.++|+|
T Consensus 273 rd~rivYgGGaaEiscslav-~~ead~~~g~eqya~rafa~ale~ipmalaensgl~pi~~ls~~ka~q~~~~~~~lGid 351 (400)
T KOG0357|consen 273 RDNRVVYGGGAAEISCALAV-SQEADKIPGIEQYAFRAFADALESIPMALAENSGLDPIETLSDVKARQVKEMNPALGID 351 (400)
T ss_pred hcCeeEecCchHHhhhhhHh-hHhhccCCcHHHHHHHHHHHHHhhcchhhhhccCCCchhhhhHhHHHHHHhcCcccCcc
Confidence 99999999999999999999 999999999999999999999999999999999999999999999887 346889999
Q ss_pred cCCCCccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHhhcCc
Q 009426 484 QHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 529 (535)
Q Consensus 484 ~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~iD~ii~~~~ 529 (535)
+.-....||++.+|+||+..|++.+..|++++.|||+||+|+.+..
T Consensus 352 cl~~G~nDMk~~~vie~l~~KkqQi~laTQ~vrMiLKiddv~~~~~ 397 (400)
T KOG0357|consen 352 CLHKGTNDMKEQHVIETLIGKKQQISLATQMVRMILKIDDVRKPGE 397 (400)
T ss_pred hhccCchhhhhhccHHHhhhhHHHHHHHHHHHHHhhhccceecCCC
Confidence 9888889999999999999999999999999999999999998764
No 42
>KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-55 Score=442.35 Aligned_cols=458 Identities=22% Similarity=0.343 Sum_probs=385.4
Q ss_pred chhhcchHHHHHHHHHHHHHHHHhhhhccCCCCCceeeecCCCCeEEecChHHHhhhccccCh----HHHHHHHHHHhhh
Q 009426 9 NAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNP----TAIMIARTAVAQD 84 (535)
Q Consensus 9 ~~~~~~~~~~~~~n~~a~~~l~~~v~~slGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~ 84 (535)
..+...|.+++..-+.++..|++++..|+||+||+++|.+.+|.|.|||||.|+.+++.+.++ .|+++++.+.+.+
T Consensus 16 ak~i~fg~~~r~~ll~Gv~~Ladav~~TlgpKgrnViieq~~gsPkvtkdgvTva~si~l~d~~~n~gaklvq~va~~tN 95 (550)
T KOG0356|consen 16 AKDIKFGKDVRAKLLQGVDLLADAVAVTLGPKGRNVIIEQSWGSPKVTKDGVTVAKSIELKDKYENIGAKLVQDVANNTN 95 (550)
T ss_pred ccccccCHHHHHHHHhhHHHHHHHhhhhccCCcceEEcccccCCCceecCCceeeccccccchhhhhccHHHHHHHhhcc
Confidence 345668889999999999999999999999999999999999999999999999999988776 6999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhhccccccCCCCCCHHHHHHHHHHhhccc--
Q 009426 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTK-- 162 (535)
Q Consensus 85 ~~~GDGttt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~tsl~sk-- 162 (535)
+..||||||+++|++++..++.+-+.+|..|.++.+|...+.+...+.|+++++++. ..+.+.++|.++.++.
T Consensus 96 ~~agdGtttatvlar~i~~eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vt-----t~eeIaqVAtiSAngD~~ 170 (550)
T KOG0356|consen 96 EEAGDGTTTATVLARAIAKEGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVT-----TPEEIAQVATISANGDKE 170 (550)
T ss_pred CccccCcchHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCC-----CHHHHHHHHhhhcCCcHH
Confidence 999999999999999999999999999999999999999999999999999999998 8999999999998863
Q ss_pred cccchHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCC-------cccccCceeEe
Q 009426 163 LYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDM-------KRRAENCYILT 235 (535)
Q Consensus 163 ~~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~-------~~~~~n~kIll 235 (535)
+.+.+++.+.++..++++++.+++ ...++-++++|+.|+++|.+|++ ..++++|++++
T Consensus 171 ig~li~~a~~kvG~~GVItv~~gk---------------t~~delev~eGmkfdrGyiSPyfi~~~k~~~~e~e~~~~ll 235 (550)
T KOG0356|consen 171 IGNLISDAMKKVGRKGVITVKDGK---------------TLEDELEVIEGMKFDRGYISPYFITSSKKQKVEFENALLLL 235 (550)
T ss_pred HHHHHHHHHHHhCcCCeEEeecCC---------------ccccchhhhhcccccccccCccccccchhhhhhhhhhhhhh
Confidence 344455566666666666665432 34567789999999999999976 35678888888
Q ss_pred eccccccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcC---
Q 009426 236 CNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAG--- 312 (535)
Q Consensus 236 ~~~~Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~--- 312 (535)
.+..+ + .++.|++...... ...+|.+|+++ +|+.++|..|.-|+
T Consensus 236 ~~kki-------------~------------------~v~~ivp~LE~A~-~~~~PLliIAe-Di~~eaL~tLIlNkLk~ 282 (550)
T KOG0356|consen 236 SEKKI-------------S------------------SVQSIVPALELAL-AKRRPLLIIAE-DIDGEALATLVLNKLKG 282 (550)
T ss_pred hhhhh-------------h------------------HHHHHhHHHHHhh-hccCceEEEeh-hcchhHHHHHHhhhhcc
Confidence 77554 2 2333333222211 23458788886 99999999998773
Q ss_pred ---ceEEEec-----ChhhHHHHHHHhCCEEecc------cCCCCCCCCcccceEEEEEECceEEEEEEccC--------
Q 009426 313 ---IIALRRA-----KRRNMERLVLACGGEAVNS------VDDLTPGCLGWAGLVYEHVLGEEKYTFVENVK-------- 370 (535)
Q Consensus 313 ---I~~v~~v-----~~~~l~~la~~tGa~ii~~------~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~-------- 370 (535)
+.+++.. ++..+.+++.+||+.++.. ++.....++|.|.++. +..+..+.+.+..
T Consensus 283 glqV~AvKapgfGdnrk~~l~Diai~Tg~~v~~~e~~~l~le~~~~~dLG~~~evv---vtkd~t~ll~g~~~~~~v~~r 359 (550)
T KOG0356|consen 283 GLQVVAVKAPGFGDNRKNLLKDIAILTGATVFGEELSTLNLEDAKLEDLGEVGEVV---VTKDDTMLLKGKGNKAQVEGR 359 (550)
T ss_pred ceeEEEEecCCCcchHHHhhhHHHHHhhhhhhccchhhcccccCchhhcCcceeEE---EecCcceeeCCCCCHHHHHHH
Confidence 3333333 3556999999999999983 4566778899999997 4444444444321
Q ss_pred ---------------------------CCCeeEEEecCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCchhHHHHHH
Q 009426 371 ---------------------------NPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQ 423 (535)
Q Consensus 371 ---------------------------~~~~~TI~i~G~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~ 423 (535)
....++|.++|.++.+++|++.+++||++++++++++| +|||||++.++|+.
T Consensus 360 Ieqik~~~e~t~~~ye~ekl~er~a~ls~gvavi~vGg~se~Ev~ekk~rv~dalnat~aaveeG-ivpGGG~all~~~~ 438 (550)
T KOG0356|consen 360 IEQIKEMIEETTSDYEKEKLNERLAKLSGGVAVIKVGGHSEVEVNEKKDRVEDALNATRAAVEEG-IVPGGGTALLRAIP 438 (550)
T ss_pred HHHHHHHHHhhhhhhhHhHHHHHHHHhcCCeEEEEecCcchhhhhhhhhhHHHHHHHHHHHhhcC-cccCCchHHHHhhh
Confidence 12468999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcCCCeeeEecCCCCccccccCCcccchHH
Q 009426 424 YLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSV 503 (535)
Q Consensus 424 ~L~~~~~~~~~~~~~~~i~~~a~aL~~ip~~L~~NaG~~~~~~i~~l~~~~~~~~~~Gid~~~g~~~d~~~~gi~dp~~v 503 (535)
.| .+....-...++.+++++.+||..|.++++.|||.|+..++.+++. ..+|||..+|+++||.+.||+||+.|
T Consensus 439 ~l-~~lk~~~~~~~k~G~eiv~~Al~~P~~~IakNAGvdg~~vv~Kv~~-----~~~gyda~~~ey~dlv~~GiidP~kV 512 (550)
T KOG0356|consen 439 VL-DELKATNNFDQKVGVEIVKKALRLPAQTIAKNAGVDGSVVVEKVLN-----DDYGYDAAKGEYVDLVEAGIIDPTKV 512 (550)
T ss_pred hh-hhcccccchHhhhhHHHHHHHHhhhHHHHHHhcCCchHHHHHHHHh-----hhhhhhhhcccHHHHHhccCCChHHH
Confidence 99 8776544557888899999999999999999999999999999982 27999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHHhhcCc
Q 009426 504 KRQIINSGPVIASQLLLVDEVIRAGR 529 (535)
Q Consensus 504 k~~~l~~A~e~a~~iL~iD~ii~~~~ 529 (535)
.+.+|..|..+|+++++++.+|...+
T Consensus 513 vr~al~~a~~vasll~tte~vvteip 538 (550)
T KOG0356|consen 513 VRTALTDAAGVASLLTTTEAVVTEIP 538 (550)
T ss_pred HHHhhhhhhHHHHHHhhheeEEEecc
Confidence 99999999999999999999986554
No 43
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=100.00 E-value=3.2e-39 Score=315.65 Aligned_cols=231 Identities=24% Similarity=0.333 Sum_probs=213.3
Q ss_pred cchHHHHHHHHHHhhhhhcCC---ccccCcc-cEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeecccc
Q 009426 165 ESLADQLTDIVVNAVLCIRKP---EEAIDLF-MVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSL 240 (535)
Q Consensus 165 ~~~~~~ls~l~~~a~~~v~~~---~~~~~~~-~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~L 240 (535)
+.|.++|++++++|+..+.+. +..+|++ +|+|++++|++++||++++|+++++++.++.||+.++||||++++++|
T Consensus 17 ~~~~~~ls~l~v~Av~~v~~~~~~~~~~di~~~I~I~ki~Ggs~~dS~li~Gvvi~k~~~~~~m~~~i~n~kIlll~~~L 96 (261)
T cd03334 17 ESWLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIPGGSPSDSEVVDGVVFTKNVAHKRMPSKIKNPRILLLQGPL 96 (261)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccCCccChhHceEEEEecCCCHHHcEEEeeEEEeCCCCCccCCcccCCCcEEEEeeee
Confidence 467899999999999998643 2368876 599999999999999999999999999999999999999999999999
Q ss_pred ccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecC
Q 009426 241 EYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAK 320 (535)
Q Consensus 241 e~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~ 320 (535)
++++++. ++++++++++.|++++++.+++|.+++ +++||++|+|++.+++||.++||+++++++
T Consensus 97 e~~~~~~-------~~~~~~~~~~~E~~~l~~~v~kI~~~g---------~nvIl~~k~I~~~a~~~l~k~gI~~v~~v~ 160 (261)
T cd03334 97 EYQRVEN-------KLLSLDPVILQEKEYLKNLVSRIVALR---------PDVILVEKSVSRIAQDLLLEAGITLVLNVK 160 (261)
T ss_pred ccccccC-------CHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEECCccCHHHHHHHHHCCCEEEEecC
Confidence 9998863 578999999999999999999998876 569999999999999999999999999999
Q ss_pred hhhHHHHHHHhCCEEeccc-CCCCCCCCcccceEEEEEECc-----eEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHH
Q 009426 321 RRNMERLVLACGGEAVNSV-DDLTPGCLGWAGLVYEHVLGE-----EKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAV 394 (535)
Q Consensus 321 ~~~l~~la~~tGa~ii~~~-~~l~~~~lG~~~~v~~~~i~~-----~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l 394 (535)
+++|+|||++|||++++++ ++++++.+|+|+.|++..+|+ ++|++|++|+.++.+||+|||+|++.++|++|++
T Consensus 161 ~~dl~rIa~~tGa~ii~~i~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~~~~~TIlLRG~t~~~lde~eR~i 240 (261)
T cd03334 161 PSVLERISRCTGADIISSMDDLLTSPKLGTCESFRVRTYVEEHGRSKTLMFFEGCPKELGCTILLRGGDLEELKKVKRVV 240 (261)
T ss_pred HHHHHHHHHHhCCEEecChhhhcCcccCcCcceEEEEEecCcCCCceeEEEEecCCCCceeEEEEECCCHHHHHHHHHHH
Confidence 9999999999999999994 588999999999999999986 6999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhhcCccc
Q 009426 395 RDGLRAVKNTIEDEAVV 411 (535)
Q Consensus 395 ~dal~~~~~~~~~~~vv 411 (535)
+||+++++++..++.++
T Consensus 241 ~Dal~v~~~~~le~~~~ 257 (261)
T cd03334 241 EFMVFAAYHLKLETSFL 257 (261)
T ss_pred HHHHHHHHHHHHhHHHH
Confidence 99999999998876443
No 44
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=100.00 E-value=9.7e-36 Score=283.77 Aligned_cols=208 Identities=42% Similarity=0.614 Sum_probs=197.2
Q ss_pred HHHHHHHHHhhccccccchHHHHHHHHHHhhhhhcCCccccCcccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccc
Q 009426 149 EILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRA 228 (535)
Q Consensus 149 ~~l~~ia~tsl~sk~~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~ 228 (535)
+.|.++|+|++++|+ +.+.+.+++++++|+..+.+.++.++.++|++++++|++..||++++|++|++++.++.||+.+
T Consensus 2 ~~l~~ia~ts~~sk~-~~~~~~l~~l~~~Av~~v~~~~~~~~~~~I~i~~~~gg~~~ds~li~Gv~~~~~~~~~~m~~~~ 80 (209)
T cd03333 2 ELLLQVATTSLNSKL-SSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDSELVVGVVFDKGYASPYMPKRL 80 (209)
T ss_pred hHHHHHHHHHhccch-hhHHHHHHHHHHHHHHHhhccCCCCchHHEEEEEecCcChhhceeEeeEEEeccccCCCCCeEc
Confidence 468899999999999 9999999999999999997654467778999999999999999999999999999999999999
Q ss_pred cCceeEeeccccccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHH
Q 009426 229 ENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLL 308 (535)
Q Consensus 229 ~n~kIll~~~~Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l 308 (535)
+||+|++++++|++ +|+++++|++.++++|
T Consensus 81 ~n~~Ill~~~~le~--------------------------------------------------vii~~~~I~~~al~~l 110 (209)
T cd03333 81 ENAKILLLDCPLEY--------------------------------------------------VVIAEKGIDDLALHYL 110 (209)
T ss_pred CCCcEEEEeCCeeE--------------------------------------------------EEEecCcccHHHHHHH
Confidence 99999999999953 5789999999999999
Q ss_pred HHcCceEEEecChhhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEECceEEEEEEccCCCCeeEEEecCCCHHHHH
Q 009426 309 ARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIA 388 (535)
Q Consensus 309 ~~~~I~~v~~v~~~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~i~G~t~~~l~ 388 (535)
.++||++++++++++|+|||++|||++++++++++++.+|+|+.+++..+++++|++|++++.+..|||+|||+|+.+++
T Consensus 111 ~~~~I~~v~~~~~~~l~~ia~~tga~ii~~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~~~~~tIllrG~t~~~l~ 190 (209)
T cd03333 111 AKAGIMAVRRVKKEDLERIARATGATIVSSLEDLTPEDLGTAELVEETKIGEEKLTFIEGCKGGKAATILLRGATEVELD 190 (209)
T ss_pred HHCCCEEEEeCCHHHHHHHHHHHCCEEecccccCChhhceeeeEEEEEEECCeEEEEEEcCCCCCEEEEEEECCCHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998899999999999999999
Q ss_pred HHHHHHHhHHHHHHHHhhc
Q 009426 389 QIKDAVRDGLRAVKNTIED 407 (535)
Q Consensus 389 e~~~~l~dal~~~~~~~~~ 407 (535)
|++|+++||++++++++++
T Consensus 191 e~kr~l~dal~~~~~~~~~ 209 (209)
T cd03333 191 EVKRSLHDALCAVRAAVEE 209 (209)
T ss_pred HHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999864
No 45
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=99.82 E-value=1.1e-19 Score=201.62 Aligned_cols=236 Identities=24% Similarity=0.337 Sum_probs=203.0
Q ss_pred cchHHHHHHHHHHhhhhhcCC---ccccCc-ccEEEEEecCCcccccEEEEEEEEeecCCCCCCcccccCceeEeecccc
Q 009426 165 ESLADQLTDIVVNAVLCIRKP---EEAIDL-FMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSL 240 (535)
Q Consensus 165 ~~~~~~ls~l~~~a~~~v~~~---~~~~~~-~~i~i~~i~g~~~~~s~li~Givl~~~~~~~~~~~~~~n~kIll~~~~L 240 (535)
..|.+.+..++.+|...+.+. ++..|+ +++++.++.||...+|+++.|+++.+..++..|..++++|||+++.++|
T Consensus 331 ~~W~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK~I~~g~~~dS~vi~Gvv~sKn~~~k~M~~~~e~prilll~g~l 410 (1598)
T KOG0230|consen 331 QEWLDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVKCVAGGSRVDSEVIKGVVCSKNVAHKRMATKYENPRILLLGGPL 410 (1598)
T ss_pred hhHHHHHHHHHHHHHHhcCcCcccCCCcCcccceEEEEecCCCcccceeeeEEEeecchhhhhhhhhccCCceEEEecch
Confidence 478889999999999988765 234444 5899999999999999999999999999999999999999999999999
Q ss_pred ccccccccceEEEeCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCceEEEeccCCCHHHHHHHHHcCceEEEecC
Q 009426 241 EYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAK 320 (535)
Q Consensus 241 e~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~~~~~~~~~~lIl~~~~i~~~al~~l~~~~I~~v~~v~ 320 (535)
++.+...+ ..-++.+++.|.++++..+.+|.... |++++.+++|++.|+++|...+|.++-+++
T Consensus 411 eyqrisn~-------lsS~etvlqqE~e~lk~~varI~s~~---------p~vllVeksVS~~aqe~L~~k~I~lvlnvK 474 (1598)
T KOG0230|consen 411 EYQRISNQ-------LSSIETVLQQEKEYLKKVVARIESLR---------PDVLLVEKSVSRIAQELLLDKGISLVLNVK 474 (1598)
T ss_pred hhhhhhcc-------ccchHHHHhhHHHHHHHHHHHHHhcC---------CCeEEEechHHHHHHHHhhccCeEEEEecc
Confidence 99866543 22344555568999999999997544 789999999999999999999999999999
Q ss_pred hhhHHHHHHHhCCEEecccCCCCCCCCcccceEEEEEEC-----ceEEEEEEccCCCCeeEEEecCCCHHHHHHHHHHHH
Q 009426 321 RRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLG-----EEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVR 395 (535)
Q Consensus 321 ~~~l~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~-----~~~~~~~~~~~~~~~~TI~i~G~t~~~l~e~~~~l~ 395 (535)
+.-|+||+++|||.|+++++.++...+|+|..++...+- .+.++||++|+.+..|||++||....++.+.++.++
T Consensus 475 ~s~leRIsR~tga~I~~siDslt~~klg~C~~F~v~~~~e~hk~sKTlmffegc~~~lG~TiLLrG~~~~eLkkVK~Vvq 554 (1598)
T KOG0230|consen 475 RSLLERISRCTGADIVPSVDSLTSQKLGYCELFRVENYVEEHKPSKTLMFFEGCPKPLGCTILLRGDSLEELKKVKHVVQ 554 (1598)
T ss_pred HHHHHHHHHHhcCceecchhhhhccccCCCccHhhhhhhhcccchhhhHHhhcCCCCCCceEEecCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999866544 457889999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCccccCCch
Q 009426 396 DGLRAVKNTIEDEAVVLGAGA 416 (535)
Q Consensus 396 dal~~~~~~~~~~~vvpGGG~ 416 (535)
-++.+..++.=+..++.--|+
T Consensus 555 ~~v~aay~l~LE~SflaDe~a 575 (1598)
T KOG0230|consen 555 YLVFAAYHLALETSFLADEGA 575 (1598)
T ss_pred HHHHHHHHHHHhhhhhhccCC
Confidence 999888776433335444444
No 46
>PF02579 Nitro_FeMo-Co: Dinitrogenase iron-molybdenum cofactor; InterPro: IPR003731 This entry represents several Nif (B, X and Y) proteins, which are involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing bacteria. The nitrogenase complex catalyses the reduction of atmospheric dinitrogen to ammonia, and is composed of an iron metalloprotein (dinitrogenase reductase; homodimer of NifH; IPR000392 from INTERPRO) and a Fe-Mo metalloprotein (dinitrogenase; heterotetramer of NifD and NifK; IPR000318 from INTERPRO). The pathway for the synthesis of the Fe-Mo cofactor involves several proteins, including NifB, NifE, NifH, NifN, NifQ, NifV and NifX. NifB appears to be an iron-sulphur source for FeMo-co biosynthesis, while NifX may be associated with the mature FeMo-co, in particular with the addition of homocitrate during the last step of biosynthesis []. The NifX protein shows sequence similarity with the C terminus of NifB [], as well as to the conserved protein MTH1175 from the archaeon Methanobacterium thermoautotrophicum, which displays a ribonuclease H-like motif of three layers, alpha/beta/alpha, with a single mixed beta-sheet [].; PDB: 2QTD_A 2KLA_A 1EO1_A 1P90_A 1RDU_A 2YX6_D 1O13_A 1T3V_A 2RE2_B 2WFB_A.
Probab=22.07 E-value=3.6e+02 Score=21.05 Aligned_cols=32 Identities=28% Similarity=0.321 Sum_probs=26.1
Q ss_pred eEEEeccCCCHHHHHHHHHcCceEEEecChhhHH
Q 009426 292 FVVINQKGIDPLSLDLLARAGIIALRRAKRRNME 325 (535)
Q Consensus 292 ~lIl~~~~i~~~al~~l~~~~I~~v~~v~~~~l~ 325 (535)
++++|. .|.+.+...|.++||-++.. ...+++
T Consensus 55 ~~li~~-~iG~~~~~~L~~~gI~v~~~-~~~~i~ 86 (94)
T PF02579_consen 55 DVLICG-GIGEGAFRALKEAGIKVYQG-AGGDIE 86 (94)
T ss_dssp SEEEES-CSCHHHHHHHHHTTSEEEES-TSSBHH
T ss_pred CEEEEe-CCCHHHHHHHHHCCCEEEEc-CCCCHH
Confidence 477885 89999999999999999998 444443
No 47
>COG3962 Acetolactate synthase [Amino acid transport and metabolism]
Probab=21.49 E-value=70 Score=33.86 Aligned_cols=39 Identities=23% Similarity=0.348 Sum_probs=32.1
Q ss_pred HHHHhHHHHHHHHhhcCccccCCchhHHHHHHHHHHHHhcc
Q 009426 392 DAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKT 432 (535)
Q Consensus 392 ~~l~dal~~~~~~~~~~~vvpGGG~~E~~l~~~L~~~~~~~ 432 (535)
+.+.+|+..+|++-+ |-+|.|||+-.-.....| ..+++.
T Consensus 217 ~eL~~A~~lik~ak~-PlIvaGGGv~YS~A~~~L-~af~E~ 255 (617)
T COG3962 217 RELADAAALIKSAKK-PLIVAGGGVLYSGAREAL-RAFAET 255 (617)
T ss_pred HHHHHHHHHHHhcCC-CEEEecCceeechHHHHH-HHHHHh
Confidence 667788888888766 889999999888888888 777654
No 48
>KOG2663 consensus Acetolactate synthase, small subunit [Amino acid transport and metabolism]
Probab=20.53 E-value=1e+02 Score=29.86 Aligned_cols=28 Identities=21% Similarity=0.377 Sum_probs=24.6
Q ss_pred eEEEecCCCHHHHHHHHHHHHhHHHHHHH
Q 009426 375 CTILIKGPNDHTIAQIKDAVRDGLRAVKN 403 (535)
Q Consensus 375 ~TI~i~G~t~~~l~e~~~~l~dal~~~~~ 403 (535)
.||+++| ++..+++.++.++|-.++.+-
T Consensus 121 mTIVl~G-td~VveQa~rQiedlVnV~aV 148 (309)
T KOG2663|consen 121 MTIVLQG-TDGVVEQARRQIEDLVNVYAV 148 (309)
T ss_pred ceEEEec-cHHHHHHHHHHHHHhhhhhee
Confidence 5999999 678999999999999998753
Done!