Query 009427
Match_columns 535
No_of_seqs 626 out of 3527
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 04:57:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009427.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009427hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oz2_A Digeranylgeranylglycero 100.0 2.3E-28 7.8E-33 254.0 18.2 276 110-390 4-328 (397)
2 3cgv_A Geranylgeranyl reductas 99.9 1.5E-24 5.2E-29 226.1 21.3 273 110-390 4-328 (397)
3 3atr_A Conserved archaeal prot 99.9 2E-24 6.8E-29 230.6 19.0 271 110-388 6-331 (453)
4 3fmw_A Oxygenase; mithramycin, 99.9 1.2E-23 4E-28 230.8 25.0 270 110-389 49-371 (570)
5 3rp8_A Flavoprotein monooxygen 99.9 6.6E-24 2.2E-28 223.1 20.6 260 108-375 21-337 (407)
6 2qa2_A CABE, polyketide oxygen 99.9 8.2E-24 2.8E-28 228.6 20.2 263 109-379 11-318 (499)
7 2qa1_A PGAE, polyketide oxygen 99.9 1.3E-23 4.6E-28 227.1 21.7 265 107-379 8-317 (500)
8 3ihg_A RDME; flavoenzyme, anth 99.9 1.5E-22 5.1E-27 220.6 26.7 265 110-379 5-341 (535)
9 4hb9_A Similarities with proba 99.9 2.6E-23 8.9E-28 217.3 17.8 155 111-270 2-175 (412)
10 3nix_A Flavoprotein/dehydrogen 99.9 7.2E-23 2.5E-27 215.6 20.1 266 110-381 5-330 (421)
11 1k0i_A P-hydroxybenzoate hydro 99.9 6.5E-23 2.2E-27 214.3 19.5 265 110-380 2-320 (394)
12 2x3n_A Probable FAD-dependent 99.9 4.6E-23 1.6E-27 215.9 16.1 262 110-380 6-327 (399)
13 3e1t_A Halogenase; flavoprotei 99.9 6.3E-23 2.2E-27 222.4 17.1 265 110-380 7-337 (512)
14 3i3l_A Alkylhalidase CMLS; fla 99.9 2.1E-22 7.3E-27 221.4 16.8 269 110-381 23-350 (591)
15 1pn0_A Phenol 2-monooxygenase; 99.9 2.1E-21 7.2E-26 216.6 22.0 263 110-379 8-391 (665)
16 2r0c_A REBC; flavin adenine di 99.9 3.2E-21 1.1E-25 210.8 22.3 263 110-379 26-349 (549)
17 2dkh_A 3-hydroxybenzoate hydro 99.9 5.3E-21 1.8E-25 212.7 22.4 157 109-267 31-217 (639)
18 3c96_A Flavin-containing monoo 99.9 7.7E-21 2.6E-25 200.0 21.8 155 110-270 4-178 (410)
19 2vou_A 2,6-dihydroxypyridine h 99.9 4.7E-21 1.6E-25 200.8 19.0 150 110-268 5-160 (397)
20 2gmh_A Electron transfer flavo 99.9 2.1E-20 7.2E-25 205.7 22.9 285 110-402 35-411 (584)
21 3alj_A 2-methyl-3-hydroxypyrid 99.8 6.5E-21 2.2E-25 198.4 16.3 254 110-374 11-316 (379)
22 2xdo_A TETX2 protein; tetracyc 99.8 4.5E-20 1.5E-24 193.4 16.3 151 110-268 26-189 (398)
23 2weu_A Tryptophan 5-halogenase 99.8 5.8E-19 2E-23 191.0 14.9 175 199-374 167-373 (511)
24 2pyx_A Tryptophan halogenase; 99.8 2.9E-19 9.8E-24 194.3 11.5 263 110-374 7-380 (526)
25 2aqj_A Tryptophan halogenase, 99.8 1.1E-18 3.8E-23 190.2 15.0 264 110-374 5-365 (538)
26 2e4g_A Tryptophan halogenase; 99.8 1.9E-18 6.5E-23 188.9 16.2 173 200-374 189-396 (550)
27 3c4a_A Probable tryptophan hyd 99.7 2E-18 6.8E-23 179.8 1.6 247 112-375 2-298 (381)
28 2bry_A NEDD9 interacting prote 99.6 3E-15 1E-19 161.5 13.1 134 110-265 92-234 (497)
29 3ihm_A Styrene monooxygenase A 99.6 7.9E-15 2.7E-19 155.3 13.0 138 110-264 22-170 (430)
30 1ryi_A Glycine oxidase; flavop 99.5 8.2E-13 2.8E-17 136.6 16.5 66 200-266 159-225 (382)
31 1yvv_A Amine oxidase, flavin-c 99.4 3.4E-12 1.2E-16 129.5 18.8 139 110-265 2-166 (336)
32 3dje_A Fructosyl amine: oxygen 99.4 5.5E-12 1.9E-16 133.2 18.6 64 200-263 156-223 (438)
33 3dme_A Conserved exported prot 99.4 6.8E-12 2.3E-16 128.5 16.9 67 200-266 145-214 (369)
34 1y56_B Sarcosine oxidase; dehy 99.4 7E-12 2.4E-16 129.7 15.6 66 199-265 143-209 (382)
35 2oln_A NIKD protein; flavoprot 99.3 2.3E-11 7.9E-16 126.6 18.7 63 200-263 148-210 (397)
36 3nyc_A D-arginine dehydrogenas 99.3 5.9E-12 2E-16 129.8 12.7 66 200-266 149-214 (381)
37 2uzz_A N-methyl-L-tryptophan o 99.3 1.5E-11 5E-16 126.7 13.8 64 199-263 143-206 (372)
38 3pvc_A TRNA 5-methylaminomethy 99.3 2.8E-11 9.4E-16 135.6 17.0 65 199-263 406-471 (689)
39 3v76_A Flavoprotein; structura 99.3 3.6E-11 1.2E-15 126.6 16.8 141 109-261 26-187 (417)
40 3ps9_A TRNA 5-methylaminomethy 99.3 2.7E-11 9.2E-16 135.4 16.2 65 199-263 411-475 (676)
41 2gf3_A MSOX, monomeric sarcosi 99.3 6.7E-11 2.3E-15 122.4 16.3 64 200-264 145-208 (389)
42 2i0z_A NAD(FAD)-utilizing dehy 99.3 2.7E-11 9.2E-16 128.7 13.4 147 110-261 26-191 (447)
43 2gag_B Heterotetrameric sarcos 99.2 5.8E-11 2E-15 123.6 15.2 66 199-265 168-234 (405)
44 2qcu_A Aerobic glycerol-3-phos 99.2 2.3E-10 7.7E-15 123.4 19.1 67 200-266 144-215 (501)
45 3nlc_A Uncharacterized protein 99.2 8.8E-11 3E-15 127.5 15.4 60 203-262 218-278 (549)
46 3da1_A Glycerol-3-phosphate de 99.2 1.9E-10 6.5E-15 125.7 17.2 67 200-266 165-237 (561)
47 3c4n_A Uncharacterized protein 99.2 6.4E-11 2.2E-15 124.0 10.0 65 200-265 167-241 (405)
48 2gqf_A Hypothetical protein HI 99.1 3.2E-10 1.1E-14 118.7 14.9 138 110-261 4-168 (401)
49 1qo8_A Flavocytochrome C3 fuma 99.1 3.2E-10 1.1E-14 124.1 15.3 155 109-263 120-314 (566)
50 3jsk_A Cypbp37 protein; octame 99.1 2.5E-10 8.5E-15 116.3 13.1 128 110-263 79-253 (344)
51 1rp0_A ARA6, thiazole biosynth 99.1 4E-10 1.4E-14 112.3 13.9 129 110-264 39-194 (284)
52 3axb_A Putative oxidoreductase 99.1 4.9E-10 1.7E-14 118.6 15.3 64 200-264 176-257 (448)
53 1pj5_A N,N-dimethylglycine oxi 99.1 6.3E-10 2.2E-14 127.1 17.0 68 199-267 145-213 (830)
54 1y0p_A Fumarate reductase flav 99.1 1.3E-09 4.5E-14 119.3 18.7 153 110-262 126-318 (571)
55 3kkj_A Amine oxidase, flavin-c 99.1 1.9E-09 6.6E-14 103.1 16.6 35 110-144 2-37 (336)
56 3ces_A MNMG, tRNA uridine 5-ca 99.1 8.2E-10 2.8E-14 121.2 15.3 145 110-261 28-181 (651)
57 2cul_A Glucose-inhibited divis 99.1 1.4E-09 4.9E-14 104.9 15.1 123 110-264 3-128 (232)
58 3cp8_A TRNA uridine 5-carboxym 99.1 1.1E-09 3.7E-14 120.1 15.4 145 110-261 21-174 (641)
59 2ywl_A Thioredoxin reductase r 99.1 1.3E-09 4.4E-14 100.6 13.8 170 111-379 2-172 (180)
60 2zxi_A TRNA uridine 5-carboxym 99.1 1.1E-09 3.8E-14 119.7 15.2 145 110-261 27-180 (637)
61 4at0_A 3-ketosteroid-delta4-5a 99.1 5.6E-10 1.9E-14 120.6 12.7 56 206-261 203-264 (510)
62 4a9w_A Monooxygenase; baeyer-v 99.1 9.9E-10 3.4E-14 111.6 13.8 128 110-262 3-133 (357)
63 2q0l_A TRXR, thioredoxin reduc 99.0 1.5E-09 5.2E-14 108.7 14.0 111 111-261 2-114 (311)
64 4fk1_A Putative thioredoxin re 99.0 1.2E-09 4.2E-14 109.5 13.3 110 109-260 5-116 (304)
65 2rgh_A Alpha-glycerophosphate 99.0 4.5E-09 1.5E-13 115.0 17.6 67 200-266 183-255 (571)
66 2gjc_A Thiazole biosynthetic e 99.0 2.5E-09 8.7E-14 108.2 14.2 129 110-264 65-242 (326)
67 3ab1_A Ferredoxin--NADP reduct 99.0 1.8E-09 6.3E-14 110.6 13.5 116 110-261 14-131 (360)
68 2zbw_A Thioredoxin reductase; 99.0 2.1E-09 7.2E-14 108.8 13.4 116 110-261 5-121 (335)
69 2h88_A Succinate dehydrogenase 99.0 1.4E-08 4.9E-13 111.8 18.7 151 110-263 18-219 (621)
70 2q7v_A Thioredoxin reductase; 99.0 3.8E-09 1.3E-13 106.6 12.9 112 110-261 8-123 (325)
71 3f8d_A Thioredoxin reductase ( 99.0 4.3E-09 1.5E-13 105.3 13.1 110 110-261 15-125 (323)
72 1kf6_A Fumarate reductase flav 99.0 1.4E-08 4.7E-13 111.8 18.1 153 110-265 5-201 (602)
73 3cty_A Thioredoxin reductase; 98.9 5.6E-09 1.9E-13 105.1 13.2 111 109-261 15-126 (319)
74 3fbs_A Oxidoreductase; structu 98.9 6.8E-09 2.3E-13 102.7 13.2 109 110-261 2-112 (297)
75 1d4d_A Flavocytochrome C fumar 98.9 2.3E-08 7.9E-13 109.4 18.6 154 110-263 126-319 (572)
76 2wdq_A Succinate dehydrogenase 98.9 1.4E-08 4.7E-13 111.5 16.8 154 110-263 7-208 (588)
77 3d1c_A Flavin-containing putat 98.9 8.5E-09 2.9E-13 105.7 14.1 136 110-261 4-143 (369)
78 1vdc_A NTR, NADPH dependent th 98.9 3E-09 1E-13 107.5 10.0 117 110-262 8-125 (333)
79 1w4x_A Phenylacetone monooxyge 98.9 1.4E-08 4.9E-13 110.4 15.8 134 109-262 15-155 (542)
80 3lzw_A Ferredoxin--NADP reduct 98.9 9E-09 3.1E-13 103.5 13.1 114 110-260 7-122 (332)
81 3gwf_A Cyclohexanone monooxyge 98.9 9.1E-09 3.1E-13 111.8 14.0 133 110-261 8-147 (540)
82 4a5l_A Thioredoxin reductase; 98.9 8.1E-09 2.8E-13 103.3 12.5 117 109-260 3-120 (314)
83 3qj4_A Renalase; FAD/NAD(P)-bi 98.9 1.1E-08 3.7E-13 104.3 13.5 131 111-259 2-163 (342)
84 3itj_A Thioredoxin reductase 1 98.9 6.4E-09 2.2E-13 104.9 11.7 117 110-261 22-142 (338)
85 2a87_A TRXR, TR, thioredoxin r 98.9 9E-09 3.1E-13 104.4 12.5 112 109-261 13-126 (335)
86 1chu_A Protein (L-aspartate ox 98.9 5.4E-09 1.9E-13 113.6 11.4 153 110-263 8-210 (540)
87 2gv8_A Monooxygenase; FMO, FAD 98.9 4.7E-09 1.6E-13 111.3 10.4 145 110-262 6-178 (447)
88 2bs2_A Quinol-fumarate reducta 98.9 1.6E-08 5.6E-13 112.2 15.0 60 204-263 157-222 (660)
89 4ap3_A Steroid monooxygenase; 98.9 1.8E-08 6E-13 109.8 14.8 133 110-261 21-159 (549)
90 1trb_A Thioredoxin reductase; 98.8 9.1E-09 3.1E-13 103.3 10.6 111 110-261 5-116 (320)
91 2e5v_A L-aspartate oxidase; ar 98.8 4E-08 1.4E-12 105.0 15.9 148 112-264 1-179 (472)
92 3ka7_A Oxidoreductase; structu 98.8 3E-08 1E-12 103.8 13.8 57 205-262 196-253 (425)
93 3uox_A Otemo; baeyer-villiger 98.8 2E-08 6.9E-13 109.2 12.5 135 110-263 9-149 (545)
94 1fl2_A Alkyl hydroperoxide red 98.8 1.9E-08 6.6E-13 100.5 11.4 111 110-261 1-115 (310)
95 4gcm_A TRXR, thioredoxin reduc 98.8 3.9E-08 1.4E-12 98.6 13.2 109 110-260 6-115 (312)
96 4dgk_A Phytoene dehydrogenase; 98.8 6.9E-08 2.4E-12 103.4 15.5 58 205-262 221-279 (501)
97 3nrn_A Uncharacterized protein 98.7 3.3E-08 1.1E-12 103.6 11.8 55 205-261 189-243 (421)
98 1c0p_A D-amino acid oxidase; a 98.7 7.6E-09 2.6E-13 106.2 6.6 51 200-263 137-187 (363)
99 1jnr_A Adenylylsulfate reducta 98.7 7.9E-08 2.7E-12 106.6 15.2 154 110-263 22-220 (643)
100 2vvm_A Monoamine oxidase N; FA 98.7 1.2E-07 4E-12 101.6 15.9 56 205-260 255-311 (495)
101 3g3e_A D-amino-acid oxidase; F 98.7 3.7E-09 1.3E-13 108.1 2.6 52 200-263 137-188 (351)
102 3k7m_X 6-hydroxy-L-nicotine ox 98.7 9.7E-08 3.3E-12 100.1 13.6 48 211-259 209-257 (431)
103 3r9u_A Thioredoxin reductase; 98.7 1.3E-07 4.3E-12 94.3 13.3 108 110-259 4-116 (315)
104 3i6d_A Protoporphyrinogen oxid 98.7 4.6E-08 1.6E-12 103.5 10.2 42 220-261 248-289 (470)
105 1hyu_A AHPF, alkyl hydroperoxi 98.7 9.7E-08 3.3E-12 103.3 12.7 112 109-261 211-326 (521)
106 3gyx_A Adenylylsulfate reducta 98.6 5E-08 1.7E-12 108.3 9.8 154 110-263 22-235 (662)
107 2xve_A Flavin-containing monoo 98.6 1.8E-07 6.1E-12 99.7 13.7 139 111-262 3-167 (464)
108 3fpz_A Thiazole biosynthetic e 98.6 2.9E-07 9.7E-12 93.2 14.4 41 338-378 283-325 (326)
109 3s5w_A L-ornithine 5-monooxyge 98.6 9.7E-08 3.3E-12 101.3 11.3 142 109-260 29-191 (463)
110 3o0h_A Glutathione reductase; 98.6 3.6E-07 1.2E-11 97.8 14.0 55 205-259 232-286 (484)
111 3nks_A Protoporphyrinogen oxid 98.6 1.1E-07 3.7E-12 101.1 9.8 54 206-260 235-289 (477)
112 2a8x_A Dihydrolipoyl dehydroge 98.6 9.7E-08 3.3E-12 101.6 9.2 137 110-261 3-146 (464)
113 1ojt_A Surface protein; redox- 98.6 1.3E-07 4.3E-12 101.3 9.5 141 110-261 6-160 (482)
114 1dxl_A Dihydrolipoamide dehydr 98.6 1.2E-07 4E-12 101.1 8.9 139 109-261 5-151 (470)
115 1ebd_A E3BD, dihydrolipoamide 98.5 6.2E-07 2.1E-11 95.1 13.7 137 110-261 3-145 (455)
116 1v59_A Dihydrolipoamide dehydr 98.5 2.8E-07 9.5E-12 98.4 10.8 140 110-261 5-157 (478)
117 2ivd_A PPO, PPOX, protoporphyr 98.5 5.1E-07 1.7E-11 96.0 11.7 53 206-261 239-294 (478)
118 3lov_A Protoporphyrinogen oxid 98.5 3.7E-07 1.3E-11 97.1 10.5 40 220-260 249-288 (475)
119 3urh_A Dihydrolipoyl dehydroge 98.5 3.7E-07 1.3E-11 97.8 10.5 33 110-142 25-58 (491)
120 3lad_A Dihydrolipoamide dehydr 98.5 2.3E-07 8E-12 98.9 8.6 33 110-142 3-36 (476)
121 3l8k_A Dihydrolipoyl dehydroge 98.4 7.8E-07 2.7E-11 94.7 11.9 132 110-260 4-143 (466)
122 1s3e_A Amine oxidase [flavin-c 98.4 1.3E-06 4.4E-11 94.2 13.2 53 206-261 216-268 (520)
123 1zk7_A HGII, reductase, mercur 98.4 5.5E-07 1.9E-11 95.8 10.0 35 110-144 4-39 (467)
124 3p1w_A Rabgdi protein; GDI RAB 98.4 3.6E-06 1.2E-10 89.5 14.6 56 205-260 256-313 (475)
125 3qfa_A Thioredoxin reductase 1 98.4 1.6E-06 5.4E-11 93.7 12.0 34 109-142 31-65 (519)
126 1zmd_A Dihydrolipoyl dehydroge 98.4 2E-06 6.8E-11 91.6 12.6 140 110-261 6-152 (474)
127 1q1r_A Putidaredoxin reductase 98.3 7.8E-07 2.7E-11 93.7 8.8 108 110-261 4-114 (431)
128 3lxd_A FAD-dependent pyridine 98.3 6.5E-07 2.2E-11 93.7 8.1 108 109-260 8-118 (415)
129 2qae_A Lipoamide, dihydrolipoy 98.3 3E-06 1E-10 90.1 12.8 139 110-260 2-147 (468)
130 4b1b_A TRXR, thioredoxin reduc 98.3 3.6E-06 1.2E-10 91.2 13.4 33 110-142 42-75 (542)
131 2hqm_A GR, grase, glutathione 98.3 2.3E-06 7.8E-11 91.4 11.7 35 110-144 11-46 (479)
132 2yg5_A Putrescine oxidase; oxi 98.3 6.8E-06 2.3E-10 86.6 14.5 42 218-260 225-267 (453)
133 4dna_A Probable glutathione re 98.3 2E-06 6.8E-11 91.4 10.3 36 110-145 5-41 (463)
134 4gut_A Lysine-specific histone 98.3 2.7E-06 9.4E-11 95.9 11.7 42 218-259 542-583 (776)
135 3dk9_A Grase, GR, glutathione 98.3 1.8E-06 6.3E-11 92.0 9.8 36 110-145 20-56 (478)
136 3oc4_A Oxidoreductase, pyridin 98.3 2.3E-06 7.8E-11 90.6 10.0 108 111-260 3-114 (452)
137 1xdi_A RV3303C-LPDA; reductase 98.3 3.2E-06 1.1E-10 90.7 11.3 133 110-260 2-155 (499)
138 3dgh_A TRXR-1, thioredoxin red 98.3 4.3E-06 1.5E-10 89.3 12.1 33 109-141 8-41 (483)
139 2v3a_A Rubredoxin reductase; a 98.2 6.7E-06 2.3E-10 85.0 13.2 97 111-261 146-243 (384)
140 2yqu_A 2-oxoglutarate dehydrog 98.2 1.4E-06 4.8E-11 92.3 8.1 33 110-142 1-34 (455)
141 1fec_A Trypanothione reductase 98.2 5.5E-06 1.9E-10 88.7 12.5 30 110-139 3-34 (490)
142 3cgb_A Pyridine nucleotide-dis 98.2 1.6E-06 5.3E-11 92.7 7.9 109 110-260 36-151 (480)
143 2r9z_A Glutathione amide reduc 98.2 7E-06 2.4E-10 87.2 12.7 35 110-144 4-39 (463)
144 3sx6_A Sulfide-quinone reducta 98.2 1.4E-06 4.9E-11 91.8 7.2 105 110-261 4-112 (437)
145 3dgz_A Thioredoxin reductase 2 98.2 4.5E-06 1.5E-10 89.3 11.1 33 109-141 5-38 (488)
146 2eq6_A Pyruvate dehydrogenase 98.2 5.4E-06 1.8E-10 88.1 11.6 35 110-144 6-41 (464)
147 1xhc_A NADH oxidase /nitrite r 98.2 1.1E-06 3.7E-11 90.7 5.8 103 111-260 9-112 (367)
148 3kd9_A Coenzyme A disulfide re 98.2 4E-06 1.4E-10 88.6 10.4 106 110-260 3-113 (449)
149 2cdu_A NADPH oxidase; flavoenz 98.2 3E-06 1E-10 89.7 9.3 110 111-260 1-116 (452)
150 3klj_A NAD(FAD)-dependent dehy 98.2 8.6E-06 2.9E-10 84.5 12.1 105 110-259 9-114 (385)
151 2bc0_A NADH oxidase; flavoprot 98.2 1.3E-06 4.5E-11 93.6 5.5 108 110-260 35-148 (490)
152 3q9t_A Choline dehydrogenase a 98.2 2.5E-05 8.4E-10 85.3 15.6 35 109-143 5-41 (577)
153 1nhp_A NADH peroxidase; oxidor 98.2 2.4E-06 8.3E-11 90.2 7.5 108 111-260 1-114 (447)
154 3fg2_P Putative rubredoxin red 98.1 3.4E-06 1.2E-10 87.9 8.4 104 111-259 2-108 (404)
155 1lvl_A Dihydrolipoamide dehydr 98.1 1.1E-05 3.9E-10 85.4 12.3 35 110-144 5-40 (458)
156 1mo9_A ORF3; nucleotide bindin 98.1 1.4E-05 4.7E-10 86.4 13.1 34 109-142 42-76 (523)
157 4b63_A L-ornithine N5 monooxyg 98.1 1.6E-05 5.5E-10 85.3 13.6 57 203-259 143-212 (501)
158 1onf_A GR, grase, glutathione 98.1 3.8E-06 1.3E-10 90.2 8.6 35 110-144 2-37 (500)
159 3ef6_A Toluene 1,2-dioxygenase 98.1 2.4E-06 8.1E-11 89.4 6.5 105 111-260 3-110 (410)
160 3ic9_A Dihydrolipoamide dehydr 98.1 4.9E-07 1.7E-11 97.0 1.0 36 110-145 8-44 (492)
161 3ics_A Coenzyme A-disulfide re 98.1 1.4E-05 4.9E-10 87.4 12.5 109 110-259 36-150 (588)
162 1ges_A Glutathione reductase; 98.1 1.5E-05 5.1E-10 84.4 12.2 35 110-144 4-39 (450)
163 3h8l_A NADH oxidase; membrane 98.1 2.6E-06 8.9E-11 88.8 6.1 104 111-261 2-113 (409)
164 2yqu_A 2-oxoglutarate dehydrog 98.1 2.7E-05 9.4E-10 82.3 13.5 95 111-260 168-263 (455)
165 3k30_A Histamine dehydrogenase 98.1 1.9E-05 6.5E-10 88.2 12.6 50 208-259 570-622 (690)
166 1y56_A Hypothetical protein PH 98.0 6.2E-06 2.1E-10 88.4 7.9 108 110-261 108-219 (493)
167 3iwa_A FAD-dependent pyridine 98.0 8.9E-06 3E-10 86.5 9.0 115 110-259 3-123 (472)
168 2x8g_A Thioredoxin glutathione 98.0 7.6E-05 2.6E-09 81.8 16.7 33 109-141 106-139 (598)
169 2eq6_A Pyruvate dehydrogenase 98.0 4.4E-05 1.5E-09 81.0 14.2 94 111-259 170-269 (464)
170 2gqw_A Ferredoxin reductase; f 98.0 1.2E-05 4.1E-10 84.0 9.5 104 110-261 7-113 (408)
171 2wpf_A Trypanothione reductase 98.0 9.6E-06 3.3E-10 87.0 9.0 31 109-139 6-38 (495)
172 3h28_A Sulfide-quinone reducta 98.0 1E-05 3.4E-10 85.1 8.6 104 111-261 3-109 (430)
173 3ntd_A FAD-dependent pyridine 98.0 1.6E-05 5.5E-10 86.4 9.9 109 111-260 2-116 (565)
174 3g5s_A Methylenetetrahydrofola 98.0 4.2E-05 1.4E-09 78.7 11.8 32 111-142 2-34 (443)
175 2v3a_A Rubredoxin reductase; a 98.0 1.5E-05 5.3E-10 82.2 8.7 106 110-261 4-113 (384)
176 2r9z_A Glutathione amide reduc 97.9 8E-05 2.7E-09 79.0 14.0 94 111-259 167-262 (463)
177 3fg2_P Putative rubredoxin red 97.9 8.5E-05 2.9E-09 77.2 13.9 95 111-259 143-239 (404)
178 1ges_A Glutathione reductase; 97.9 6.4E-05 2.2E-09 79.5 12.9 94 111-259 168-263 (450)
179 3qvp_A Glucose oxidase; oxidor 97.9 0.00024 8.1E-09 77.5 17.7 34 109-142 18-53 (583)
180 3lxd_A FAD-dependent pyridine 97.9 8.8E-05 3E-09 77.3 13.5 96 111-260 153-250 (415)
181 1ebd_A E3BD, dihydrolipoamide 97.9 0.00011 3.8E-09 77.6 13.8 94 111-259 171-268 (455)
182 2bcg_G Secretory pathway GDP d 97.9 1.2E-05 4E-10 85.2 6.0 57 205-262 242-301 (453)
183 3hyw_A Sulfide-quinone reducta 97.8 2.3E-05 7.8E-10 82.4 7.9 102 112-260 4-108 (430)
184 4gde_A UDP-galactopyranose mut 97.8 8.2E-06 2.8E-10 87.2 4.3 53 205-259 222-274 (513)
185 1m6i_A Programmed cell death p 97.8 1.8E-05 6.2E-10 84.7 6.9 128 109-260 10-143 (493)
186 2gag_A Heterotetrameric sarcos 97.8 4.2E-05 1.4E-09 88.5 10.4 33 110-142 128-161 (965)
187 1v59_A Dihydrolipoamide dehydr 97.8 0.00015 5E-09 77.1 13.6 94 111-259 184-285 (478)
188 1q1r_A Putidaredoxin reductase 97.8 0.00014 4.8E-09 76.4 12.5 95 111-259 150-248 (431)
189 1mo9_A ORF3; nucleotide bindin 97.8 0.00016 5.3E-09 78.0 13.2 96 111-261 215-316 (523)
190 3ef6_A Toluene 1,2-dioxygenase 97.8 7.9E-05 2.7E-09 77.7 10.4 96 111-260 144-240 (410)
191 2hqm_A GR, grase, glutathione 97.8 0.00018 6.1E-09 76.6 13.1 94 111-259 186-283 (479)
192 3iwa_A FAD-dependent pyridine 97.7 0.00017 5.9E-09 76.5 12.8 96 111-260 160-257 (472)
193 1nhp_A NADH peroxidase; oxidor 97.7 0.00013 4.3E-09 77.0 11.7 94 110-259 149-244 (447)
194 2gqw_A Ferredoxin reductase; f 97.7 0.0002 6.9E-09 74.6 13.1 91 111-259 146-237 (408)
195 1xdi_A RV3303C-LPDA; reductase 97.7 0.00023 7.8E-09 76.2 13.8 95 111-260 183-278 (499)
196 3vrd_B FCCB subunit, flavocyto 97.7 0.00012 4.2E-09 75.7 11.2 101 112-260 4-107 (401)
197 3fim_B ARYL-alcohol oxidase; A 97.7 0.00011 3.9E-09 79.8 11.1 33 110-142 2-36 (566)
198 3oc4_A Oxidoreductase, pyridin 97.7 0.00027 9.3E-09 74.5 12.9 94 111-259 148-242 (452)
199 1ojt_A Surface protein; redox- 97.7 0.0002 6.9E-09 76.2 11.6 95 111-260 186-285 (482)
200 1onf_A GR, grase, glutathione 97.6 0.00031 1.1E-08 75.2 13.0 94 111-259 177-273 (500)
201 2cdu_A NADPH oxidase; flavoenz 97.6 0.00037 1.3E-08 73.5 13.4 95 111-259 150-245 (452)
202 4eqs_A Coenzyme A disulfide re 97.6 0.00021 7.3E-09 75.1 11.4 108 112-260 2-115 (437)
203 1fec_A Trypanothione reductase 97.6 0.0003 1E-08 75.1 12.7 94 111-259 188-286 (490)
204 2qae_A Lipoamide, dihydrolipoy 97.6 0.00043 1.5E-08 73.4 13.7 94 111-259 175-274 (468)
205 1zmd_A Dihydrolipoyl dehydroge 97.6 0.00036 1.2E-08 74.0 13.1 95 111-259 179-280 (474)
206 2wpf_A Trypanothione reductase 97.6 0.00036 1.2E-08 74.6 13.0 94 111-259 192-290 (495)
207 2a8x_A Dihydrolipoyl dehydroge 97.6 0.00041 1.4E-08 73.4 13.4 94 111-259 172-269 (464)
208 1zk7_A HGII, reductase, mercur 97.6 0.00046 1.6E-08 73.1 13.7 93 111-260 177-270 (467)
209 1m6i_A Programmed cell death p 97.6 0.00039 1.3E-08 74.4 13.0 95 111-259 181-280 (493)
210 3ntd_A FAD-dependent pyridine 97.6 0.00046 1.6E-08 74.8 13.6 95 112-261 153-267 (565)
211 1v0j_A UDP-galactopyranose mut 97.5 6E-05 2.1E-09 78.4 5.4 34 109-142 6-41 (399)
212 3cgb_A Pyridine nucleotide-dis 97.5 0.00065 2.2E-08 72.3 13.5 93 111-260 187-281 (480)
213 3urh_A Dihydrolipoyl dehydroge 97.5 0.00075 2.6E-08 71.9 13.9 94 111-259 199-298 (491)
214 2b9w_A Putative aminooxidase; 97.5 8.1E-05 2.8E-09 77.6 6.2 42 218-260 216-257 (424)
215 4b1b_A TRXR, thioredoxin reduc 97.5 0.00075 2.6E-08 73.0 13.9 92 112-259 225-317 (542)
216 3hdq_A UDP-galactopyranose mut 97.5 7.8E-05 2.7E-09 77.5 5.9 34 109-142 28-62 (397)
217 2jae_A L-amino acid oxidase; o 97.5 7.5E-05 2.6E-09 79.4 5.9 52 206-259 240-294 (489)
218 1lvl_A Dihydrolipoamide dehydr 97.5 0.00028 9.7E-09 74.6 10.3 92 111-259 172-266 (458)
219 1dxl_A Dihydrolipoamide dehydr 97.5 0.00034 1.2E-08 74.1 10.9 94 111-259 178-277 (470)
220 1trb_A Thioredoxin reductase; 97.5 0.00079 2.7E-08 66.8 12.8 92 111-259 146-245 (320)
221 3lad_A Dihydrolipoamide dehydr 97.5 0.00087 3E-08 71.1 13.6 94 111-259 181-278 (476)
222 4g6h_A Rotenone-insensitive NA 97.5 0.00012 4.1E-09 78.5 7.0 33 110-142 42-75 (502)
223 2e1m_A L-glutamate oxidase; L- 97.5 0.0001 3.4E-09 76.1 6.0 32 110-141 44-76 (376)
224 1d5t_A Guanine nucleotide diss 97.5 0.00011 3.7E-09 77.3 6.3 58 205-262 234-291 (433)
225 4dna_A Probable glutathione re 97.5 0.00089 3E-08 70.8 13.1 93 111-259 171-266 (463)
226 3s5w_A L-ornithine 5-monooxyge 97.4 0.0016 5.4E-08 68.6 15.0 131 110-259 227-375 (463)
227 2bc0_A NADH oxidase; flavoprot 97.4 0.00068 2.3E-08 72.3 12.1 93 111-259 195-289 (490)
228 3ic9_A Dihydrolipoamide dehydr 97.4 0.0011 3.7E-08 70.8 13.6 93 111-259 175-272 (492)
229 1rsg_A FMS1 protein; FAD bindi 97.4 9.2E-05 3.2E-09 79.5 5.0 40 220-259 215-255 (516)
230 1i8t_A UDP-galactopyranose mut 97.4 9.3E-05 3.2E-09 76.1 4.6 32 111-142 2-34 (367)
231 3t37_A Probable dehydrogenase; 97.4 7.4E-05 2.5E-09 80.3 4.0 34 109-142 16-51 (526)
232 3d1c_A Flavin-containing putat 97.4 0.001 3.4E-08 67.5 12.3 102 111-260 167-271 (369)
233 3pl8_A Pyranose 2-oxidase; sub 97.4 0.00011 3.9E-09 80.8 5.4 37 109-145 45-82 (623)
234 1kdg_A CDH, cellobiose dehydro 97.4 0.00011 3.7E-09 79.7 5.0 34 109-142 6-40 (546)
235 1sez_A Protoporphyrinogen oxid 97.4 0.00012 4E-09 78.2 5.1 34 110-143 13-47 (504)
236 1xhc_A NADH oxidase /nitrite r 97.3 0.00077 2.6E-08 69.1 10.4 88 111-259 144-232 (367)
237 3dgh_A TRXR-1, thioredoxin red 97.3 0.0015 5.2E-08 69.4 12.4 93 111-259 188-287 (483)
238 3dk9_A Grase, GR, glutathione 97.3 0.002 6.9E-08 68.3 13.4 94 111-259 188-291 (478)
239 3itj_A Thioredoxin reductase 1 97.3 0.0012 4E-08 65.9 10.7 88 111-259 174-269 (338)
240 3ics_A Coenzyme A-disulfide re 97.2 0.0017 5.7E-08 70.9 12.3 94 111-261 188-282 (588)
241 2vdc_G Glutamate synthase [NAD 97.2 0.00028 9.5E-09 74.8 5.8 33 110-142 122-155 (456)
242 2iid_A L-amino-acid oxidase; f 97.2 0.00027 9.1E-09 75.3 5.4 51 206-259 242-296 (498)
243 3dgz_A Thioredoxin reductase 2 97.2 0.0036 1.2E-07 66.6 13.8 92 112-259 187-285 (488)
244 2zbw_A Thioredoxin reductase; 97.1 0.0028 9.5E-08 63.3 11.9 92 111-259 153-250 (335)
245 2bi7_A UDP-galactopyranose mut 97.1 0.00033 1.1E-08 72.4 5.0 33 110-142 3-36 (384)
246 4dsg_A UDP-galactopyranose mut 97.1 0.00041 1.4E-08 74.0 5.7 33 110-142 9-43 (484)
247 1ju2_A HydroxynitrIle lyase; f 97.1 0.00021 7E-09 77.4 3.3 33 110-143 26-59 (536)
248 3kd9_A Coenzyme A disulfide re 97.1 0.0022 7.5E-08 67.4 11.0 93 111-259 149-242 (449)
249 2q0l_A TRXR, thioredoxin reduc 97.1 0.0049 1.7E-07 60.8 12.9 88 111-259 144-239 (311)
250 3ab1_A Ferredoxin--NADP reduct 97.0 0.0021 7.3E-08 65.1 10.3 92 111-259 164-261 (360)
251 1b37_A Protein (polyamine oxid 97.0 0.00054 1.8E-08 72.6 5.6 54 206-259 207-268 (472)
252 4eqs_A Coenzyme A disulfide re 97.0 0.0026 9E-08 66.7 10.6 89 112-259 149-238 (437)
253 1o94_A Tmadh, trimethylamine d 96.9 0.00076 2.6E-08 75.7 6.0 34 109-142 388-422 (729)
254 3qfa_A Thioredoxin reductase 1 96.8 0.012 4E-07 63.2 14.5 92 112-259 212-313 (519)
255 3l8k_A Dihydrolipoyl dehydroge 96.8 0.0053 1.8E-07 64.8 11.6 92 111-259 173-270 (466)
256 2z3y_A Lysine-specific histone 96.8 0.001 3.4E-08 73.8 6.1 41 218-258 409-455 (662)
257 3f8d_A Thioredoxin reductase ( 96.8 0.0078 2.7E-07 59.3 12.0 88 111-259 155-249 (323)
258 1fl2_A Alkyl hydroperoxide red 96.8 0.0073 2.5E-07 59.5 11.7 88 111-259 145-240 (310)
259 1ps9_A 2,4-dienoyl-COA reducta 96.8 0.0009 3.1E-08 74.3 5.4 35 108-142 371-406 (671)
260 3cty_A Thioredoxin reductase; 96.8 0.0065 2.2E-07 60.2 11.3 88 111-259 156-250 (319)
261 1n4w_A CHOD, cholesterol oxida 96.8 0.00078 2.7E-08 72.2 4.7 33 110-142 5-38 (504)
262 3r9u_A Thioredoxin reductase; 96.8 0.01 3.4E-07 58.4 12.4 89 111-259 148-242 (315)
263 1coy_A Cholesterol oxidase; ox 96.8 0.00094 3.2E-08 71.6 5.2 34 109-142 10-44 (507)
264 2q7v_A Thioredoxin reductase; 96.8 0.0095 3.3E-07 59.2 12.1 88 111-259 153-247 (325)
265 2x8g_A Thioredoxin glutathione 96.7 0.016 5.4E-07 63.3 14.4 92 112-259 288-393 (598)
266 3lzw_A Ferredoxin--NADP reduct 96.7 0.0065 2.2E-07 60.2 10.4 88 111-259 155-248 (332)
267 2xag_A Lysine-specific histone 96.7 0.0015 5.3E-08 74.1 6.2 34 109-142 277-311 (852)
268 1vg0_A RAB proteins geranylger 96.7 0.0017 5.9E-08 71.2 6.1 39 108-146 6-45 (650)
269 1gpe_A Protein (glucose oxidas 96.6 0.0013 4.4E-08 71.9 4.5 34 109-142 23-58 (587)
270 1vdc_A NTR, NADPH dependent th 96.6 0.011 3.7E-07 58.9 11.0 88 111-259 160-257 (333)
271 2jbv_A Choline oxidase; alcoho 96.5 0.0014 4.7E-08 71.0 4.2 33 110-142 13-47 (546)
272 3fbs_A Oxidoreductase; structu 96.5 0.011 3.9E-07 57.4 10.5 151 111-380 142-294 (297)
273 4g6h_A Rotenone-insensitive NA 96.5 0.0085 2.9E-07 64.1 10.2 116 209-376 276-399 (502)
274 1gte_A Dihydropyrimidine dehyd 96.5 0.002 6.7E-08 75.1 5.5 33 110-142 187-221 (1025)
275 1lqt_A FPRA; NADP+ derivative, 96.4 0.0019 6.6E-08 68.2 4.3 34 110-143 3-44 (456)
276 1cjc_A Protein (adrenodoxin re 96.4 0.0023 7.9E-08 67.7 4.9 34 110-143 6-42 (460)
277 3uox_A Otemo; baeyer-villiger 96.4 0.027 9.1E-07 60.9 13.2 32 111-142 186-218 (545)
278 3klj_A NAD(FAD)-dependent dehy 96.3 0.0018 6.3E-08 66.8 3.8 81 112-259 148-229 (385)
279 3gwf_A Cyclohexanone monooxyge 96.3 0.056 1.9E-06 58.2 15.4 32 111-142 179-211 (540)
280 2a87_A TRXR, TR, thioredoxin r 96.2 0.012 4.3E-07 58.7 8.7 88 111-259 156-250 (335)
281 1cjc_A Protein (adrenodoxin re 96.0 0.038 1.3E-06 58.2 12.1 37 339-380 360-397 (460)
282 1hyu_A AHPF, alkyl hydroperoxi 95.9 0.037 1.2E-06 59.3 11.3 88 111-259 356-451 (521)
283 3ayj_A Pro-enzyme of L-phenyla 95.7 0.0045 1.5E-07 68.8 3.0 33 110-142 56-97 (721)
284 4ap3_A Steroid monooxygenase; 95.6 0.044 1.5E-06 59.1 10.7 32 111-142 192-224 (549)
285 1ps9_A 2,4-dienoyl-COA reducta 95.6 0.031 1.1E-06 61.8 9.5 48 209-259 577-626 (671)
286 1lqt_A FPRA; NADP+ derivative, 95.4 0.043 1.5E-06 57.8 9.5 31 111-141 148-200 (456)
287 2gag_A Heterotetrameric sarcos 95.0 0.051 1.7E-06 62.8 9.2 86 111-260 285-382 (965)
288 1gte_A Dihydropyrimidine dehyd 95.0 0.18 6.2E-06 58.5 13.7 30 112-141 334-365 (1025)
289 3fwz_A Inner membrane protein 94.8 0.038 1.3E-06 48.0 5.7 31 111-141 8-39 (140)
290 4a5l_A Thioredoxin reductase; 94.7 0.18 6.3E-06 49.2 11.2 31 111-141 153-184 (314)
291 2xve_A Flavin-containing monoo 94.4 0.13 4.5E-06 54.1 9.8 31 111-141 198-229 (464)
292 2gv8_A Monooxygenase; FMO, FAD 94.3 0.052 1.8E-06 56.8 6.5 31 111-141 213-245 (447)
293 2vdc_G Glutamate synthase [NAD 94.2 0.11 3.6E-06 54.8 8.6 32 111-142 265-298 (456)
294 3h8l_A NADH oxidase; membrane 94.0 0.31 1E-05 50.0 11.5 47 209-259 222-268 (409)
295 1o94_A Tmadh, trimethylamine d 93.8 0.18 6.3E-06 56.2 10.0 32 111-142 529-563 (729)
296 2g1u_A Hypothetical protein TM 93.7 0.067 2.3E-06 47.2 5.0 32 111-142 20-52 (155)
297 3llv_A Exopolyphosphatase-rela 93.6 0.065 2.2E-06 46.2 4.8 31 111-141 7-38 (141)
298 3sx6_A Sulfide-quinone reducta 93.5 0.43 1.5E-05 49.5 11.7 49 209-259 212-267 (437)
299 1d5t_A Guanine nucleotide diss 93.5 0.065 2.2E-06 55.9 5.3 35 108-142 4-39 (433)
300 1lss_A TRK system potassium up 93.4 0.069 2.4E-06 45.6 4.6 31 111-141 5-36 (140)
301 2bcg_G Secretory pathway GDP d 93.4 0.13 4.5E-06 53.9 7.4 36 109-144 10-46 (453)
302 4a9w_A Monooxygenase; baeyer-v 93.3 0.18 6E-06 50.1 7.9 30 111-141 164-194 (357)
303 3h28_A Sulfide-quinone reducta 92.6 0.56 1.9E-05 48.5 10.8 49 209-259 204-254 (430)
304 1id1_A Putative potassium chan 92.5 0.12 4.1E-06 45.4 4.8 31 111-141 4-35 (153)
305 3c85_A Putative glutathione-re 92.1 0.11 3.8E-06 47.0 4.2 31 111-141 40-72 (183)
306 1b37_A Protein (polyamine oxid 91.8 0.15 5E-06 53.6 5.3 33 110-142 4-38 (472)
307 2hmt_A YUAA protein; RCK, KTN, 91.4 0.16 5.3E-06 43.5 4.2 30 112-141 8-38 (144)
308 3ic5_A Putative saccharopine d 91.1 0.17 5.9E-06 41.5 4.0 31 111-141 6-38 (118)
309 3ado_A Lambda-crystallin; L-gu 91.1 0.18 6.3E-06 50.3 4.8 31 111-141 7-38 (319)
310 4gcm_A TRXR, thioredoxin reduc 90.8 0.15 5.1E-06 50.1 3.8 30 112-141 147-177 (312)
311 3l4b_C TRKA K+ channel protien 90.3 0.23 7.8E-06 46.4 4.5 30 112-141 2-32 (218)
312 1w4x_A Phenylacetone monooxyge 90.3 2 6.7E-05 45.9 12.4 32 111-142 187-219 (542)
313 1f0y_A HCDH, L-3-hydroxyacyl-C 89.9 0.26 8.8E-06 48.6 4.7 30 112-141 17-47 (302)
314 3k6j_A Protein F01G10.3, confi 89.6 0.52 1.8E-05 49.4 7.0 60 111-174 55-115 (460)
315 4e12_A Diketoreductase; oxidor 89.6 0.29 9.9E-06 47.8 4.7 30 112-141 6-36 (283)
316 3vtf_A UDP-glucose 6-dehydroge 89.5 0.3 1E-05 51.0 4.9 32 110-141 21-53 (444)
317 2y0c_A BCEC, UDP-glucose dehyd 89.4 0.29 1E-05 51.7 4.9 32 110-141 8-40 (478)
318 2dpo_A L-gulonate 3-dehydrogen 88.9 0.36 1.2E-05 48.2 4.8 31 111-141 7-38 (319)
319 4a7p_A UDP-glucose dehydrogena 88.4 0.4 1.4E-05 50.2 5.1 33 110-142 8-41 (446)
320 3lk7_A UDP-N-acetylmuramoylala 88.4 0.31 1E-05 51.1 4.2 32 111-142 10-42 (451)
321 2x5o_A UDP-N-acetylmuramoylala 88.0 0.28 9.6E-06 51.2 3.5 32 112-143 7-39 (439)
322 1jw9_B Molybdopterin biosynthe 87.7 0.39 1.3E-05 46.1 4.1 33 111-143 32-66 (249)
323 3l9w_A Glutathione-regulated p 87.5 0.48 1.6E-05 49.1 4.9 31 111-141 5-36 (413)
324 3i83_A 2-dehydropantoate 2-red 87.4 0.47 1.6E-05 47.2 4.6 31 111-141 3-34 (320)
325 3gg2_A Sugar dehydrogenase, UD 87.3 0.46 1.6E-05 49.8 4.7 30 112-141 4-34 (450)
326 1ks9_A KPA reductase;, 2-dehyd 87.2 0.51 1.7E-05 45.6 4.7 31 112-142 2-33 (291)
327 2raf_A Putative dinucleotide-b 86.6 0.6 2.1E-05 43.3 4.7 32 111-142 20-52 (209)
328 2ew2_A 2-dehydropantoate 2-red 86.6 0.57 1.9E-05 45.9 4.7 31 111-141 4-35 (316)
329 1zej_A HBD-9, 3-hydroxyacyl-CO 86.5 0.55 1.9E-05 46.2 4.5 31 110-141 12-43 (293)
330 3hn2_A 2-dehydropantoate 2-red 86.4 0.54 1.9E-05 46.5 4.5 31 111-141 3-34 (312)
331 3doj_A AT3G25530, dehydrogenas 86.0 0.74 2.5E-05 45.5 5.2 32 111-142 22-54 (310)
332 3ghy_A Ketopantoate reductase 86.0 0.65 2.2E-05 46.4 4.8 31 111-141 4-35 (335)
333 1mv8_A GMD, GDP-mannose 6-dehy 85.9 0.54 1.8E-05 49.0 4.3 30 112-141 2-32 (436)
334 1zcj_A Peroxisomal bifunctiona 85.8 0.56 1.9E-05 49.3 4.4 31 111-141 38-69 (463)
335 3g79_A NDP-N-acetyl-D-galactos 85.5 0.58 2E-05 49.4 4.3 32 111-142 19-53 (478)
336 2jae_A L-amino acid oxidase; o 85.5 1.2 4.1E-05 46.6 6.8 34 110-143 11-45 (489)
337 4fk1_A Putative thioredoxin re 85.3 1.7 5.8E-05 42.3 7.4 30 112-141 148-179 (304)
338 3ojo_A CAP5O; rossmann fold, c 85.1 0.62 2.1E-05 48.5 4.2 31 111-141 12-43 (431)
339 3eag_A UDP-N-acetylmuramate:L- 85.1 0.72 2.5E-05 46.0 4.6 32 111-142 5-38 (326)
340 4dio_A NAD(P) transhydrogenase 85.1 0.73 2.5E-05 47.4 4.7 31 111-141 191-222 (405)
341 3pef_A 6-phosphogluconate dehy 84.8 0.79 2.7E-05 44.6 4.7 31 112-142 3-34 (287)
342 1lld_A L-lactate dehydrogenase 84.7 0.79 2.7E-05 45.3 4.7 31 111-141 8-41 (319)
343 3g0o_A 3-hydroxyisobutyrate de 84.6 0.79 2.7E-05 45.0 4.6 31 111-141 8-39 (303)
344 4b63_A L-ornithine N5 monooxyg 84.5 12 0.00039 39.5 14.0 31 112-142 248-281 (501)
345 3qha_A Putative oxidoreductase 84.0 0.67 2.3E-05 45.5 3.8 32 111-142 16-48 (296)
346 1bg6_A N-(1-D-carboxylethyl)-L 83.9 0.87 3E-05 45.5 4.7 31 111-141 5-36 (359)
347 3oj0_A Glutr, glutamyl-tRNA re 83.9 0.35 1.2E-05 41.9 1.4 31 111-141 22-53 (144)
348 3mog_A Probable 3-hydroxybutyr 83.8 0.88 3E-05 48.1 4.8 30 112-141 7-37 (483)
349 3g17_A Similar to 2-dehydropan 83.8 0.65 2.2E-05 45.5 3.6 31 111-141 3-34 (294)
350 3dtt_A NADP oxidoreductase; st 83.7 0.94 3.2E-05 43.1 4.6 32 110-141 19-51 (245)
351 3p2y_A Alanine dehydrogenase/p 83.7 0.77 2.6E-05 46.9 4.1 31 111-141 185-216 (381)
352 3l6d_A Putative oxidoreductase 83.6 1.3 4.4E-05 43.6 5.7 31 111-141 10-41 (306)
353 1z82_A Glycerol-3-phosphate de 83.6 0.96 3.3E-05 45.1 4.8 32 110-141 14-46 (335)
354 3pdu_A 3-hydroxyisobutyrate de 83.4 0.77 2.6E-05 44.6 3.9 31 112-142 3-34 (287)
355 4dll_A 2-hydroxy-3-oxopropiona 83.4 0.97 3.3E-05 44.9 4.7 31 111-141 32-63 (320)
356 3pid_A UDP-glucose 6-dehydroge 83.3 0.81 2.8E-05 47.6 4.2 30 111-141 37-67 (432)
357 1kyq_A Met8P, siroheme biosynt 83.3 0.63 2.1E-05 45.4 3.1 31 111-141 14-45 (274)
358 3dfz_A SIRC, precorrin-2 dehyd 83.1 0.91 3.1E-05 42.8 4.1 31 111-141 32-63 (223)
359 1vg0_A RAB proteins geranylger 83.1 2.7 9.4E-05 45.9 8.4 55 204-258 377-434 (650)
360 1txg_A Glycerol-3-phosphate de 83.0 0.84 2.9E-05 45.2 4.1 29 112-140 2-31 (335)
361 3k96_A Glycerol-3-phosphate de 82.8 1 3.4E-05 45.6 4.6 31 111-141 30-61 (356)
362 2h78_A Hibadh, 3-hydroxyisobut 82.6 0.96 3.3E-05 44.2 4.3 31 111-141 4-35 (302)
363 3o0h_A Glutathione reductase; 82.6 1.6 5.5E-05 45.8 6.3 32 111-142 192-224 (484)
364 2v6b_A L-LDH, L-lactate dehydr 82.6 1.1 3.7E-05 44.2 4.7 30 112-141 2-34 (304)
365 2vns_A Metalloreductase steap3 82.5 1.2 4.1E-05 41.4 4.7 31 111-141 29-60 (215)
366 2ewd_A Lactate dehydrogenase,; 82.4 1.1 3.7E-05 44.4 4.6 31 111-141 5-37 (317)
367 2hjr_A Malate dehydrogenase; m 82.3 1.1 3.8E-05 44.7 4.7 31 111-141 15-47 (328)
368 1pzg_A LDH, lactate dehydrogen 82.3 1 3.6E-05 45.0 4.5 31 111-141 10-42 (331)
369 1x13_A NAD(P) transhydrogenase 82.3 1.1 3.7E-05 46.2 4.7 31 111-141 173-204 (401)
370 4g65_A TRK system potassium up 82.1 0.56 1.9E-05 49.3 2.5 31 111-141 4-35 (461)
371 4e21_A 6-phosphogluconate dehy 82.1 1.1 3.8E-05 45.3 4.6 31 111-141 23-54 (358)
372 1dlj_A UDP-glucose dehydrogena 81.8 0.86 2.9E-05 46.9 3.7 29 112-141 2-31 (402)
373 3hwr_A 2-dehydropantoate 2-red 81.7 1.2 4E-05 44.2 4.6 30 111-141 20-50 (318)
374 1nyt_A Shikimate 5-dehydrogena 81.7 1.3 4.4E-05 42.9 4.7 31 111-141 120-151 (271)
375 1zud_1 Adenylyltransferase THI 81.7 1.2 4.2E-05 42.6 4.5 33 111-143 29-63 (251)
376 3h8v_A Ubiquitin-like modifier 81.6 1.1 3.8E-05 44.0 4.3 35 110-144 36-72 (292)
377 1pjc_A Protein (L-alanine dehy 81.6 1.2 4E-05 45.2 4.6 31 111-141 168-199 (361)
378 3rui_A Ubiquitin-like modifier 81.4 1.6 5.4E-05 43.8 5.3 35 110-144 34-70 (340)
379 4gwg_A 6-phosphogluconate dehy 81.4 1.5 5.1E-05 46.3 5.4 33 110-142 4-37 (484)
380 1l7d_A Nicotinamide nucleotide 81.3 1.2 4.2E-05 45.4 4.7 31 111-141 173-204 (384)
381 1rsg_A FMS1 protein; FAD bindi 81.0 1.1 3.8E-05 47.4 4.4 33 110-142 8-42 (516)
382 4ezb_A Uncharacterized conserv 81.0 1.1 3.9E-05 44.3 4.2 32 111-142 25-58 (317)
383 2wtb_A MFP2, fatty acid multif 80.9 1.1 3.9E-05 49.8 4.5 31 111-141 313-344 (725)
384 2f1k_A Prephenate dehydrogenas 80.8 1.4 4.8E-05 42.4 4.7 30 112-141 2-32 (279)
385 2eez_A Alanine dehydrogenase; 80.8 1.3 4.4E-05 45.0 4.6 31 111-141 167-198 (369)
386 2p4q_A 6-phosphogluconate dehy 80.7 1.5 5.1E-05 46.5 5.2 32 110-141 10-42 (497)
387 3ktd_A Prephenate dehydrogenas 80.6 1.5 5E-05 44.2 4.8 31 111-141 9-40 (341)
388 3ggo_A Prephenate dehydrogenas 80.6 1.4 4.9E-05 43.6 4.7 31 111-141 34-67 (314)
389 3ond_A Adenosylhomocysteinase; 80.4 1.4 4.8E-05 46.4 4.7 31 111-141 266-297 (488)
390 1t2d_A LDH-P, L-lactate dehydr 80.3 1.7 5.7E-05 43.3 5.1 31 111-141 5-37 (322)
391 2qyt_A 2-dehydropantoate 2-red 80.2 1 3.5E-05 44.1 3.6 30 111-140 9-45 (317)
392 3tl2_A Malate dehydrogenase; c 80.2 1.5 5E-05 43.7 4.6 31 111-141 9-41 (315)
393 2uyy_A N-PAC protein; long-cha 80.1 1.6 5.5E-05 42.9 4.9 31 111-141 31-62 (316)
394 3ego_A Probable 2-dehydropanto 80.0 1.4 4.8E-05 43.4 4.4 30 111-141 3-33 (307)
395 2q3e_A UDP-glucose 6-dehydroge 80.0 1.2 4.2E-05 46.7 4.2 31 111-141 6-39 (467)
396 1evy_A Glycerol-3-phosphate de 79.9 0.85 2.9E-05 46.1 2.8 30 112-141 17-47 (366)
397 2zyd_A 6-phosphogluconate dehy 79.9 1.5 5.1E-05 46.3 4.8 32 110-141 15-47 (480)
398 2aef_A Calcium-gated potassium 79.7 0.72 2.5E-05 43.3 2.1 30 111-141 10-40 (234)
399 1pgj_A 6PGDH, 6-PGDH, 6-phosph 79.7 1.6 5.4E-05 46.1 4.9 30 112-141 3-33 (478)
400 2pgd_A 6-phosphogluconate dehy 79.5 1.6 5.4E-05 46.1 4.9 31 111-141 3-34 (482)
401 4huj_A Uncharacterized protein 79.5 1.3 4.4E-05 41.3 3.8 31 111-141 24-56 (220)
402 1wdk_A Fatty oxidation complex 79.5 1.4 4.7E-05 49.0 4.5 32 111-142 315-347 (715)
403 1vpd_A Tartronate semialdehyde 79.5 1.4 4.9E-05 42.8 4.3 31 111-141 6-37 (299)
404 2g5c_A Prephenate dehydrogenas 79.4 1.7 5.7E-05 42.0 4.7 30 112-141 3-35 (281)
405 2o3j_A UDP-glucose 6-dehydroge 79.4 1.1 3.8E-05 47.2 3.7 31 111-141 10-43 (481)
406 3qsg_A NAD-binding phosphogluc 79.4 1.4 4.6E-05 43.6 4.1 31 111-141 25-57 (312)
407 1yqg_A Pyrroline-5-carboxylate 79.3 1.4 4.9E-05 41.9 4.1 30 112-141 2-33 (263)
408 2vhw_A Alanine dehydrogenase; 79.2 1.6 5.3E-05 44.5 4.6 31 111-141 169-200 (377)
409 2gf2_A Hibadh, 3-hydroxyisobut 79.2 1.6 5.5E-05 42.3 4.5 30 112-141 2-32 (296)
410 1y56_A Hypothetical protein PH 78.9 1.9 6.6E-05 45.4 5.3 48 213-260 265-312 (493)
411 3dfu_A Uncharacterized protein 78.7 0.68 2.3E-05 43.9 1.5 32 110-141 6-38 (232)
412 4gbj_A 6-phosphogluconate dehy 78.6 1.2 4.1E-05 43.8 3.4 31 112-142 7-38 (297)
413 2b9w_A Putative aminooxidase; 78.5 2.4 8.2E-05 43.2 5.8 33 110-142 6-40 (424)
414 3gvi_A Malate dehydrogenase; N 78.4 2 6.8E-05 42.8 4.9 32 110-141 7-40 (324)
415 1guz_A Malate dehydrogenase; o 78.4 1.8 6.2E-05 42.7 4.7 30 112-141 2-34 (310)
416 4gx0_A TRKA domain protein; me 78.3 1.8 6E-05 46.5 4.9 32 111-142 349-381 (565)
417 3cky_A 2-hydroxymethyl glutara 78.1 1.7 6E-05 42.2 4.4 31 111-141 5-36 (301)
418 2egg_A AROE, shikimate 5-dehyd 77.9 1.8 6E-05 42.6 4.4 31 111-141 142-174 (297)
419 3h5n_A MCCB protein; ubiquitin 77.8 1.6 5.5E-05 44.0 4.2 33 111-143 119-153 (353)
420 3ew7_A LMO0794 protein; Q8Y8U8 77.6 2.1 7.1E-05 39.1 4.5 30 112-141 2-33 (221)
421 1a5z_A L-lactate dehydrogenase 77.3 1.7 5.8E-05 43.1 4.1 30 112-141 2-34 (319)
422 3phh_A Shikimate dehydrogenase 77.3 2.2 7.4E-05 41.4 4.7 31 111-141 119-150 (269)
423 3gvp_A Adenosylhomocysteinase 77.1 2.1 7E-05 44.4 4.7 31 111-141 221-252 (435)
424 2cvz_A Dehydrogenase, 3-hydrox 77.0 1.7 5.9E-05 41.9 3.9 29 112-141 3-32 (289)
425 3guy_A Short-chain dehydrogena 76.8 2.3 7.9E-05 39.5 4.7 29 113-141 4-34 (230)
426 2iz1_A 6-phosphogluconate dehy 76.8 2.2 7.4E-05 44.9 4.9 31 111-141 6-37 (474)
427 2iid_A L-amino-acid oxidase; f 76.7 3.3 0.00011 43.3 6.3 33 110-142 33-66 (498)
428 2a9f_A Putative malic enzyme ( 76.5 1.9 6.5E-05 44.1 4.2 32 110-141 188-221 (398)
429 3h2s_A Putative NADH-flavin re 76.5 2.3 7.8E-05 39.0 4.5 29 113-141 3-33 (224)
430 3ce6_A Adenosylhomocysteinase; 76.5 2.1 7.2E-05 45.3 4.7 31 111-141 275-306 (494)
431 3d4o_A Dipicolinate synthase s 76.5 2.2 7.4E-05 41.7 4.6 31 111-141 156-187 (293)
432 1p77_A Shikimate 5-dehydrogena 76.5 1.6 5.4E-05 42.2 3.5 31 111-141 120-151 (272)
433 3e8x_A Putative NAD-dependent 76.4 2.3 7.8E-05 39.5 4.5 31 111-141 22-54 (236)
434 1y8q_A Ubiquitin-like 1 activa 76.4 2.4 8.1E-05 42.7 4.9 34 111-144 37-72 (346)
435 1ur5_A Malate dehydrogenase; o 76.0 2.4 8.1E-05 41.9 4.7 30 112-141 4-35 (309)
436 4gsl_A Ubiquitin-like modifier 75.9 2.6 8.9E-05 45.5 5.2 34 111-144 327-362 (615)
437 3orf_A Dihydropteridine reduct 75.9 2.4 8.1E-05 40.1 4.5 31 112-142 24-56 (251)
438 2rir_A Dipicolinate synthase, 75.8 2.3 7.9E-05 41.6 4.6 31 111-141 158-189 (300)
439 4ffl_A PYLC; amino acid, biosy 75.5 2.4 8.1E-05 42.6 4.7 31 112-142 3-34 (363)
440 1hyh_A L-hicdh, L-2-hydroxyiso 75.4 2 7E-05 42.2 4.1 30 112-141 3-35 (309)
441 3awd_A GOX2181, putative polyo 75.3 2.5 8.5E-05 39.9 4.5 30 112-141 15-46 (260)
442 3d1l_A Putative NADP oxidoredu 75.3 2.2 7.7E-05 40.7 4.2 31 111-141 11-43 (266)
443 2dkn_A 3-alpha-hydroxysteroid 75.3 2.5 8.6E-05 39.5 4.5 30 113-142 4-35 (255)
444 2hk9_A Shikimate dehydrogenase 75.3 2.1 7.3E-05 41.3 4.1 31 111-141 130-161 (275)
445 4fc7_A Peroxisomal 2,4-dienoyl 75.2 4.5 0.00015 38.8 6.4 30 112-141 29-60 (277)
446 1np3_A Ketol-acid reductoisome 75.2 2.6 8.8E-05 42.1 4.8 30 112-141 18-48 (338)
447 3gt0_A Pyrroline-5-carboxylate 75.1 2.7 9.4E-05 39.7 4.8 30 112-141 4-38 (247)
448 1leh_A Leucine dehydrogenase; 75.0 2.5 8.7E-05 42.8 4.7 31 111-141 174-205 (364)
449 1i36_A Conserved hypothetical 74.8 2.2 7.5E-05 40.6 4.0 29 112-140 2-31 (264)
450 1yj8_A Glycerol-3-phosphate de 74.8 1.8 6E-05 43.9 3.5 31 112-142 23-61 (375)
451 3l6e_A Oxidoreductase, short-c 74.8 2.7 9.2E-05 39.4 4.6 30 112-141 5-36 (235)
452 3vh1_A Ubiquitin-like modifier 74.8 2.8 9.5E-05 45.2 5.1 34 111-144 328-363 (598)
453 2d5c_A AROE, shikimate 5-dehyd 74.7 2.9 9.9E-05 40.0 4.8 30 112-141 118-148 (263)
454 1hdo_A Biliverdin IX beta redu 74.7 2.8 9.6E-05 37.6 4.6 31 112-142 5-37 (206)
455 1vl6_A Malate oxidoreductase; 74.6 2.3 7.8E-05 43.4 4.2 32 110-141 192-225 (388)
456 3zwc_A Peroxisomal bifunctiona 74.5 2.2 7.5E-05 47.5 4.4 31 111-141 317-348 (742)
457 3h9u_A Adenosylhomocysteinase; 74.5 2.6 9.1E-05 43.6 4.7 31 111-141 212-243 (436)
458 2wsb_A Galactitol dehydrogenas 74.4 2.7 9.3E-05 39.4 4.5 30 112-141 13-44 (254)
459 3qiv_A Short-chain dehydrogena 74.2 2.8 9.5E-05 39.5 4.5 30 112-141 11-42 (253)
460 1cyd_A Carbonyl reductase; sho 74.2 2.8 9.7E-05 39.0 4.6 30 112-141 9-40 (244)
461 2cfc_A 2-(R)-hydroxypropyl-COM 74.1 2.8 9.6E-05 39.2 4.5 29 113-141 5-35 (250)
462 1o5i_A 3-oxoacyl-(acyl carrier 74.0 2.8 9.7E-05 39.6 4.6 30 112-141 21-52 (249)
463 3obb_A Probable 3-hydroxyisobu 74.0 2.5 8.7E-05 41.5 4.3 30 112-141 5-35 (300)
464 3h7a_A Short chain dehydrogena 74.0 2.8 9.7E-05 39.7 4.6 30 112-141 9-40 (252)
465 1x0v_A GPD-C, GPDH-C, glycerol 73.9 1.6 5.5E-05 43.6 2.9 32 111-142 9-48 (354)
466 1y6j_A L-lactate dehydrogenase 73.8 3.1 0.00011 41.2 4.9 31 111-141 8-41 (318)
467 1dhr_A Dihydropteridine reduct 73.7 2.6 9E-05 39.4 4.2 31 112-142 9-41 (241)
468 1ooe_A Dihydropteridine reduct 73.7 2.5 8.5E-05 39.4 4.0 31 112-142 5-37 (236)
469 3dii_A Short-chain dehydrogena 73.7 2.9 0.0001 39.4 4.6 29 113-141 5-35 (247)
470 3f1l_A Uncharacterized oxidore 73.7 2.9 0.0001 39.5 4.6 30 112-141 14-45 (252)
471 3c7a_A Octopine dehydrogenase; 73.6 1.7 5.6E-05 44.5 3.0 28 112-139 4-33 (404)
472 1oju_A MDH, malate dehydrogena 73.6 2.5 8.5E-05 41.5 4.1 30 112-141 2-34 (294)
473 3don_A Shikimate dehydrogenase 73.5 2.4 8.2E-05 41.2 3.9 32 111-142 118-151 (277)
474 1fjh_A 3alpha-hydroxysteroid d 73.5 2.9 0.0001 39.3 4.5 30 113-142 4-35 (257)
475 2ehd_A Oxidoreductase, oxidore 73.5 2.5 8.6E-05 39.2 4.0 30 112-141 7-38 (234)
476 3n74_A 3-ketoacyl-(acyl-carrie 73.4 3 0.0001 39.5 4.5 30 112-141 11-42 (261)
477 1uay_A Type II 3-hydroxyacyl-C 73.4 2.5 8.5E-05 39.2 4.0 31 112-142 4-36 (242)
478 2pd6_A Estradiol 17-beta-dehyd 73.4 3 0.0001 39.4 4.5 30 112-141 9-40 (264)
479 3jyo_A Quinate/shikimate dehyd 73.4 3.1 0.00011 40.6 4.7 31 111-141 128-160 (283)
480 3d3w_A L-xylulose reductase; u 73.4 3 0.0001 38.8 4.6 30 112-141 9-40 (244)
481 3r6d_A NAD-dependent epimerase 73.2 3.2 0.00011 38.1 4.6 29 113-141 8-39 (221)
482 3tnl_A Shikimate dehydrogenase 73.2 2.9 0.0001 41.4 4.6 31 111-141 155-187 (315)
483 3u62_A Shikimate dehydrogenase 73.2 3.2 0.00011 39.7 4.7 30 112-141 110-141 (253)
484 3ppi_A 3-hydroxyacyl-COA dehyd 73.1 3 0.0001 40.0 4.5 30 112-141 32-63 (281)
485 2rcy_A Pyrroline carboxylate r 73.1 2.5 8.5E-05 40.2 3.9 32 111-142 5-41 (262)
486 2z3y_A Lysine-specific histone 73.0 4.6 0.00016 44.2 6.6 33 110-142 107-140 (662)
487 2ahr_A Putative pyrroline carb 73.0 2.5 8.7E-05 40.1 4.0 31 111-141 4-35 (259)
488 3i1j_A Oxidoreductase, short c 72.9 2.6 9E-05 39.4 4.0 30 112-141 16-47 (247)
489 3dqp_A Oxidoreductase YLBE; al 72.9 2.5 8.4E-05 38.8 3.7 31 112-142 2-34 (219)
490 2ekp_A 2-deoxy-D-gluconate 3-d 72.9 3.2 0.00011 38.8 4.5 30 112-141 4-35 (239)
491 3ldh_A Lactate dehydrogenase; 72.9 4.4 0.00015 40.4 5.7 32 110-141 21-55 (330)
492 4e6p_A Probable sorbitol dehyd 72.8 3.1 0.00011 39.4 4.5 30 112-141 10-41 (259)
493 3l77_A Short-chain alcohol deh 72.8 3.2 0.00011 38.5 4.6 30 112-141 4-35 (235)
494 3rkr_A Short chain oxidoreduct 72.8 2.6 8.9E-05 40.1 4.0 30 112-141 31-62 (262)
495 3dhn_A NAD-dependent epimerase 72.7 2.8 9.5E-05 38.5 4.1 32 111-142 5-38 (227)
496 1nvt_A Shikimate 5'-dehydrogen 72.7 2.3 7.7E-05 41.4 3.6 30 111-141 129-159 (287)
497 3ak4_A NADH-dependent quinucli 72.7 3.1 0.00011 39.4 4.5 30 112-141 14-45 (263)
498 3p19_A BFPVVD8, putative blue 72.7 3.3 0.00011 39.6 4.7 30 112-141 18-49 (266)
499 3pqe_A L-LDH, L-lactate dehydr 72.7 3.1 0.00011 41.5 4.6 31 111-141 6-39 (326)
500 3gpi_A NAD-dependent epimerase 72.5 3.3 0.00011 39.7 4.7 31 112-142 5-36 (286)
No 1
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.96 E-value=2.3e-28 Score=253.99 Aligned_cols=276 Identities=16% Similarity=0.171 Sum_probs=166.3
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCc-cc-ccccHHHHHHHHHcCCCChHh-HHHHHh--hhcCCC-
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGRE-QE-WNISRKELLELVESGILVEDD-IDEATA--TKFNPN- 182 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~-~~-~~is~~~l~~L~~lGl~~~~~-~~~~~~--~~~~~~- 182 (535)
+|||+||| ||+|+++|+.|+++|++|+||||.+..+.. ++ ..++...++.+ |+..... +...+. +.+.+.
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l---~~~~~~~~~~~~~~~~~~~~~~~ 80 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEA---DIKADRSFIANEVKGARIYGPSE 80 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHT---TCCCCTTTEEEEESEEEEECTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHc---CCCchhhhhhcccceEEEEeCCC
Confidence 69999999 999999999999999999999997543332 22 23565655554 6532111 000000 111221
Q ss_pred cccccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEE--cCC--eEEEcCeEEEccC
Q 009427 183 RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEG--KILSSHLIIDAMG 258 (535)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~--~~G--~~i~a~lVV~AdG 258 (535)
......... .......+.+++..+.+.|.+.+.+.|++++.+++|+++..+++.++... .++ .+++||+||+|||
T Consensus 81 ~~~~~~~~~-~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG 159 (397)
T 3oz2_A 81 KRPIILQSE-KAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADG 159 (397)
T ss_dssp SSCEEEECS-SSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred ceEeecccc-ccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCc
Confidence 000000000 00122345689999999999999999999999999999988887655322 233 4699999999999
Q ss_pred CChHHHHHhCCCCCC-CCCceeEEEEEecC-CCCCCChHHH------HHHHhhhccCccCC-------C---CCc-cchh
Q 009427 259 NFSPVVKQAFPAGSG-PLDRTTYMFTYIDP-QAGSPKLEEL------LERYWDLMPEYQGV-------T---LDN-LEIQ 319 (535)
Q Consensus 259 ~~S~v~~~~~p~~~~-~~~~~~~~~~y~~~-~~~~~~l~~~------~~~~~~~~P~~~~~-------~---~~~-~~~~ 319 (535)
.+|.+++++-..... +.......+.+... ....+...++ ..++.|++|...+. . ... ....
T Consensus 160 ~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~ 239 (397)
T 3oz2_A 160 FESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWIHNRFELK 239 (397)
T ss_dssp TTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTSCSHHHHH
T ss_pred cccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccchhhhhhhHH
Confidence 999999875221111 01111122222211 1111111110 12445555543321 0 000 0000
Q ss_pred -------------------cchhccccCCCCCCCCccCCCeeEeecCCCcccccccccchHHHHHHHHHHHHHHHHHhCC
Q 009427 320 -------------------RVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGD 380 (535)
Q Consensus 320 -------------------r~~~g~~P~~~~~pl~~~~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~~al~~~ 380 (535)
+...+.+|... ...+...+|++++|||||.++|++|||++.|++++..||+.|.++++.+
T Consensus 240 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~ 318 (397)
T 3oz2_A 240 NYLDRFIENHPGLKKGQDIQLVTGGVSVSK-VKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESN 318 (397)
T ss_dssp HHHHHHHHTCHHHHTSEEEEEEEEEEECCC-CCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCccccccceeeeeeccccccC-cccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcC
Confidence 00112233322 1112335999999999999999999999999999999999999999888
Q ss_pred CCChhchhhh
Q 009427 381 FVDSYSLSLL 390 (535)
Q Consensus 381 ~~~~~~l~~l 390 (535)
+.+...|..|
T Consensus 319 ~~~~~~L~~Y 328 (397)
T 3oz2_A 319 DYSPQMMQKY 328 (397)
T ss_dssp CCSHHHHHHH
T ss_pred CccHHHHHHH
Confidence 7776665543
No 2
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.92 E-value=1.5e-24 Score=226.15 Aligned_cols=273 Identities=15% Similarity=0.162 Sum_probs=166.0
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCC-ccc-ccccHHHHHHHHHcCCCChHhH-HHHHh--hhcCCC-
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGR-EQE-WNISRKELLELVESGILVEDDI-DEATA--TKFNPN- 182 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~-~~~-~~is~~~l~~L~~lGl~~~~~~-~~~~~--~~~~~~- 182 (535)
++||+||| |++|+++|+.|+++|++|+||||+...+. ... ..++...++.+ |+...... ...+. ..+.+.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~l---g~~~~~~~~~~~~~~~~~~~~~~ 80 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEA---DIKADRSFIANEVKGARIYGPSE 80 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHT---TCCCCTTTEEEEESEEEEECTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHc---CCCCChHHhhhhcceEEEEcCCC
Confidence 58999999 99999999999999999999999864332 222 22444444444 76332100 00000 011111
Q ss_pred -c-ccccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE-EEEc---CCeEEEcCeEEEc
Q 009427 183 -R-CGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA---EGKILSSHLIIDA 256 (535)
Q Consensus 183 -~-~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~-v~~~---~G~~i~a~lVV~A 256 (535)
. ..+... . ......+.+++..+.+.|.+.+.+.|++++.+++|++++.+++.++ |.+. ++.+++||+||+|
T Consensus 81 ~~~~~~~~~--~-~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A 157 (397)
T 3cgv_A 81 KRPIILQSE--K-AGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAA 157 (397)
T ss_dssp SSCEEEC--------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CEEEEEecc--c-cCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEEC
Confidence 0 111100 0 0022356689999999999999999999999999999998888776 6652 4568999999999
Q ss_pred cCCChHHHHHh-CCCCCCCCCceeEEEEEecC-CCCCCChHH-H-----HHHHhhhccCccCC-------CCCc----cc
Q 009427 257 MGNFSPVVKQA-FPAGSGPLDRTTYMFTYIDP-QAGSPKLEE-L-----LERYWDLMPEYQGV-------TLDN----LE 317 (535)
Q Consensus 257 dG~~S~v~~~~-~p~~~~~~~~~~~~~~y~~~-~~~~~~l~~-~-----~~~~~~~~P~~~~~-------~~~~----~~ 317 (535)
||.+|.++++. ++....+.....+...+.-. ....+.... . -.+|.|++|...+. ..+. ..
T Consensus 158 ~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~ 237 (397)
T 3cgv_A 158 DGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWIHNRFE 237 (397)
T ss_dssp CCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTCSCHHH
T ss_pred CCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccccccCCCC
Confidence 99999888875 22201101111221222111 111111101 1 13456667754321 0000 00
Q ss_pred h----h---------------cchhccccCCCCCCCCcc-CCCeeEeecCCCcccccccccchHHHHHHHHHHHHHHHHH
Q 009427 318 I----Q---------------RVIYGIFPTYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAV 377 (535)
Q Consensus 318 ~----~---------------r~~~g~~P~~~~~pl~~~-~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~~al 377 (535)
. . +...+.+|... +.+.+ .+|++++|||||.++|++|+|++.+++++..|++.|.+++
T Consensus 238 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~ 315 (397)
T 3cgv_A 238 LKNYLDRFIENHPGLKKGQDIQLVTGGVSVSK--VKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAI 315 (397)
T ss_dssp HHHHHHHHHHTCHHHHTSEEEEEEEEEEECCC--CCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCCCeEEeeeeeeeecCC--CccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00112344432 22333 5999999999999999999999999999999999999988
Q ss_pred hCCCCChhchhhh
Q 009427 378 RGDFVDSYSLSLL 390 (535)
Q Consensus 378 ~~~~~~~~~l~~l 390 (535)
..+..+...|..|
T Consensus 316 ~~~~~~~~~l~~Y 328 (397)
T 3cgv_A 316 ESNDYSPQMMQKY 328 (397)
T ss_dssp HHTCCSHHHHHHH
T ss_pred HcCCccHHHHHHH
Confidence 7666555555443
No 3
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.92 E-value=2e-24 Score=230.65 Aligned_cols=271 Identities=18% Similarity=0.221 Sum_probs=163.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCC--Cc-ccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKG--RE-QEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~--~~-~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~ 185 (535)
++||+||| ||+|+++|+.|+++|++|+||||..... .. ....++.+.++. +|+.... ...+...+. +...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~---lg~~~~~--~~~~~~~~~-~~~~ 79 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDK---LGMPYPK--GEELENKIN-GIKL 79 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHH---TTCCCCC--GGGEEEEEE-EEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHH---hcCCCCc--hHHHHhhhc-ceEE
Confidence 58999999 9999999999999999999999986421 11 112244444444 4764311 000000000 0000
Q ss_pred ccccCc-ceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE-EEEc---CCe--EEEcCeEEEccC
Q 009427 186 FEGKGE-IWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA---EGK--ILSSHLIIDAMG 258 (535)
Q Consensus 186 ~~~~~~-~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~-v~~~---~G~--~i~a~lVV~AdG 258 (535)
+..... .+......+.+++..+.+.|.+.+.+.|++++.+++|+++..++++++ |++. +|+ +++||+||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG 159 (453)
T 3atr_A 80 YSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATG 159 (453)
T ss_dssp ECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCG
T ss_pred ECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcC
Confidence 000110 011111245688999999999999999999999999999988877754 4443 665 799999999999
Q ss_pred CChHHHHHhCCCC--CCCCCceeEEEEEec----CCC-CCCChHH-H------HHHHhhhccCccCC---------CCCc
Q 009427 259 NFSPVVKQAFPAG--SGPLDRTTYMFTYID----PQA-GSPKLEE-L------LERYWDLMPEYQGV---------TLDN 315 (535)
Q Consensus 259 ~~S~v~~~~~p~~--~~~~~~~~~~~~y~~----~~~-~~~~l~~-~------~~~~~~~~P~~~~~---------~~~~ 315 (535)
.+|.++++..... ..+.....+...|.. ..+ .++.... + -.+|+|++|...+. ....
T Consensus 160 ~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~ 239 (453)
T 3atr_A 160 YSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGY 239 (453)
T ss_dssp GGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEEESSSCC
T ss_pred CchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEecCCCCC
Confidence 9999887642211 011111122333321 111 1111111 1 13567777754321 0000
Q ss_pred --c--chhcch----------------hccccCCCCCCCCcc-CCCeeEeecCCCcccccccccchHHHHHHHHHHHHHH
Q 009427 316 --L--EIQRVI----------------YGIFPTYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 374 (535)
Q Consensus 316 --~--~~~r~~----------------~g~~P~~~~~pl~~~-~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~ 374 (535)
. .+.+.+ .+.+|... +.+.+ .+|++++|||||.++|++|||++.|++||..|++.|.
T Consensus 240 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~ 317 (453)
T 3atr_A 240 PSIHEYYKKYLDKYAPDVDKSKLLVKGGALVPTRR--PLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAIL 317 (453)
T ss_dssp CCHHHHHHHHHHHHCTTEEEEEEEEEEEEEEECSS--CCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhhhcCCCeEEeccceeccCCC--CCCceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHH
Confidence 0 000000 02233322 33333 5999999999999999999999999999999999999
Q ss_pred HHHhCCCCChhchh
Q 009427 375 EAVRGDFVDSYSLS 388 (535)
Q Consensus 375 ~al~~~~~~~~~l~ 388 (535)
+++..+..+...|.
T Consensus 318 ~~l~~~~~~~~~L~ 331 (453)
T 3atr_A 318 SAFETGDFSASGLW 331 (453)
T ss_dssp HHHHHTCCSTTTTT
T ss_pred HHHHcCCccHHHHH
Confidence 98875544444443
No 4
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.92 E-value=1.2e-23 Score=230.81 Aligned_cols=270 Identities=18% Similarity=0.205 Sum_probs=161.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCC-CcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCC-c---
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKG-REQEWNISRKELLELVESGILVEDDIDEATATKFNPN-R--- 183 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~-~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~-~--- 183 (535)
++|||||| ||+|+++|+.|+++|++|+||||.+... ..+...++...++.|.++|+++ .+ ........ .
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~--~l---~~~~~~~~~~~~~ 123 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLD--RF---LEGTQVAKGLPFA 123 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHH--HH---TTSCCBCSBCCBT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChH--HH---HhcCcccCCceeC
Confidence 69999999 9999999999999999999999986433 2233457778888888888731 11 11111100 0
Q ss_pred -c---cccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEE--cCC-eEEEcCeEEEc
Q 009427 184 -C---GFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEG-KILSSHLIIDA 256 (535)
Q Consensus 184 -~---~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~--~~G-~~i~a~lVV~A 256 (535)
. .+.. ..........+.+++..+.+.|.+.+.+.|++|+++++|++++.++++++|++ .+| .+++||+||+|
T Consensus 124 ~~~~~~~~~-~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~A 202 (570)
T 3fmw_A 124 GIFTQGLDF-GLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGC 202 (570)
T ss_dssp TBCTTCCBG-GGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEEC
T ss_pred Ccccccccc-cccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEc
Confidence 0 1100 00001112245688999999999999988999999999999988888888887 567 68999999999
Q ss_pred cCCChHHHHHh---CCCCCCCCCceeEEEEEecCCCCCC-ChHHHHHHHhhh-ccCccC----C-----------CCCcc
Q 009427 257 MGNFSPVVKQA---FPAGSGPLDRTTYMFTYIDPQAGSP-KLEELLERYWDL-MPEYQG----V-----------TLDNL 316 (535)
Q Consensus 257 dG~~S~v~~~~---~p~~~~~~~~~~~~~~y~~~~~~~~-~l~~~~~~~~~~-~P~~~~----~-----------~~~~~ 316 (535)
||.+|.++++. ++.. +.....+........+..+ .+...-.+++++ +|...+ + .....
T Consensus 203 DG~~S~vR~~lGi~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~ 280 (570)
T 3fmw_A 203 DGGRSTVRRLAADRFPGT--EATVRALIGYVTTPEREVPRRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPV 280 (570)
T ss_dssp SCSSCHHHHHTTCCCCCC--CCCEEEEEEECCCCSCSSCCCCCCCCSSCEEECCCC------CEEEEEESCC-----CCC
T ss_pred CCCCchHHHHcCCCCccc--eeeeEEEEEEEEecCCCcceEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccCC
Confidence 99999988874 2221 1111111111111000000 000000011111 222110 0 00000
Q ss_pred ---chhcc---hhc-------------cccCCCCCCCCcc-CCCeeEeecCCCcccccccccchHHHHHHHHHHHHHHHH
Q 009427 317 ---EIQRV---IYG-------------IFPTYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEA 376 (535)
Q Consensus 317 ---~~~r~---~~g-------------~~P~~~~~pl~~~-~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~~a 376 (535)
.+.+. .++ .+|.... ..+.+ .+|++++|||||.++|++|||+|.+++||..|+++|+..
T Consensus 281 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~ 359 (570)
T 3fmw_A 281 TLEDLGAAVARVRGTPLTLTEPVSWLSRFGDASR-QAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAAR 359 (570)
T ss_dssp CHHHHHHHTTSSSSCCCCCCSCCEEEEEECCCCE-ECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcccccceeeeeeEEeecccc-cccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHH
Confidence 00000 011 0111110 11122 499999999999999999999999999999999999998
Q ss_pred HhCCCCChhchhh
Q 009427 377 VRGDFVDSYSLSL 389 (535)
Q Consensus 377 l~~~~~~~~~l~~ 389 (535)
++. ......|..
T Consensus 360 ~~g-~~~~~lL~~ 371 (570)
T 3fmw_A 360 VRG-WGSEELLDT 371 (570)
T ss_dssp HHS-CCCHHHHHH
T ss_pred HcC-CCcHHHHHH
Confidence 864 333444443
No 5
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.91 E-value=6.6e-24 Score=223.09 Aligned_cols=260 Identities=17% Similarity=0.143 Sum_probs=159.7
Q ss_pred CCcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCC-cccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccc
Q 009427 108 VGTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (535)
Q Consensus 108 ~~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~-~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~ 185 (535)
.+++||+||| |++|+++|+.|+++|++|+||||...... .+...++...++.|.++|+. +.+... ......+.
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~--~~~~~~---~~~~~~~~ 95 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMG--DIMETF---GGPLRRMA 95 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCH--HHHHHH---SCCCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCH--HHHHhh---cCCCcceE
Confidence 3469999999 99999999999999999999999864322 22334667777788777873 222221 11111111
Q ss_pred ccc-c-Ccc-eee---------eccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeE
Q 009427 186 FEG-K-GEI-WVE---------DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLI 253 (535)
Q Consensus 186 ~~~-~-~~~-~~~---------~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lV 253 (535)
+.. . +.. ... ....+.+++..|.+.|.+.+.+ ++|+++++|++++.++++++|++.+|++++||+|
T Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~v 173 (407)
T 3rp8_A 96 YRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLL 173 (407)
T ss_dssp EEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred EEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEE
Confidence 111 1 110 000 1234568899999999999877 8899999999999999999999989989999999
Q ss_pred EEccCCChHHHHHhCCCCCCCCCceeEEE--EEecCCCCCCC---hHHHH--HHHhhhccCccCC-------------CC
Q 009427 254 IDAMGNFSPVVKQAFPAGSGPLDRTTYMF--TYIDPQAGSPK---LEELL--ERYWDLMPEYQGV-------------TL 313 (535)
Q Consensus 254 V~AdG~~S~v~~~~~p~~~~~~~~~~~~~--~y~~~~~~~~~---l~~~~--~~~~~~~P~~~~~-------------~~ 313 (535)
|+|||.+|.++++.++....+ ....+.. .........+. ...++ +++++++|...+. ..
T Consensus 174 V~AdG~~S~vr~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 252 (407)
T 3rp8_A 174 IAADGSHSALRPWVLGFTPQR-RYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAGLAE 252 (407)
T ss_dssp EECCCTTCSSHHHHHSSCCCC-EEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTCSC
T ss_pred EECCCcChHHHHHhcCCCCCC-cccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcCCCC
Confidence 999999999999875542111 1111111 11111101111 00010 2233444432210 00
Q ss_pred Cccchh---cchh-cc----------cc--------CCCCCCCCcc-CCCeeEeecCCCcccccccccchHHHHHHHHHH
Q 009427 314 DNLEIQ---RVIY-GI----------FP--------TYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLS 370 (535)
Q Consensus 314 ~~~~~~---r~~~-g~----------~P--------~~~~~pl~~~-~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La 370 (535)
+..... +..+ ++ .+ .+...+.+.+ .+|+++||||||.++|++|||+|.+++||..|+
T Consensus 253 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La 332 (407)
T 3rp8_A 253 DRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLG 332 (407)
T ss_dssp CTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHH
Confidence 000000 0000 00 00 0001122223 599999999999999999999999999999999
Q ss_pred HHHHH
Q 009427 371 TGVYE 375 (535)
Q Consensus 371 ~~l~~ 375 (535)
+.|.+
T Consensus 333 ~~L~~ 337 (407)
T 3rp8_A 333 AVFRQ 337 (407)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 98863
No 6
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.91 E-value=8.2e-24 Score=228.65 Aligned_cols=263 Identities=16% Similarity=0.154 Sum_probs=161.2
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCC-cccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCC---c
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPN---R 183 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~-~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~---~ 183 (535)
.++||+||| ||+|+++|+.|+++|++|+||||.+.... .+...++...++.|.++|+.+ ++... . ..... .
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~--~~~~~-~-~~~~~~~~~ 86 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILP--AFGPV-E-TSTQGHFGG 86 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGG--GGCSC-C-EESEEEETT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHH--HHHhc-c-ccccceecc
Confidence 479999999 99999999999999999999999854322 233457778888888889743 11110 0 00000 0
Q ss_pred ccccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCe---EEEcCeEEEccCCC
Q 009427 184 CGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK---ILSSHLIIDAMGNF 260 (535)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~---~i~a~lVV~AdG~~ 260 (535)
..+... .........+.+++..+.+.|.+.+.+.|++++.+++|++++.+++++++++.++. +++||+||+|||.+
T Consensus 87 ~~~~~~-~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 87 RPVDFG-VLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp EEEEGG-GSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred eecccc-cCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 001000 00000112345788999999999999999999999999999988888988887663 79999999999999
Q ss_pred hHHHHHhCCCCCC-CCCceeEEEEEecCCCCCCC-hHHH--HHHHhhhccCccCC--------C------CCccc---hh
Q 009427 261 SPVVKQAFPAGSG-PLDRTTYMFTYIDPQAGSPK-LEEL--LERYWDLMPEYQGV--------T------LDNLE---IQ 319 (535)
Q Consensus 261 S~v~~~~~p~~~~-~~~~~~~~~~y~~~~~~~~~-l~~~--~~~~~~~~P~~~~~--------~------~~~~~---~~ 319 (535)
|.+++++-....+ ......+..... . ...+. .... -.++++++|...+. . ..... +.
T Consensus 166 S~VR~~lg~~~~~~~~~~~~~~~~v~-~-~~~~~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (499)
T 2qa2_A 166 STVRKAAGFDFPGTSASREMFLADIR-G-CEITPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVA 243 (499)
T ss_dssp CHHHHHTTCCCCEECCCCCEEEEEEE-S-CCCCCEEEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHH
T ss_pred cHHHHHcCCCCCCCCCccEEEEEEEE-E-CCCCcceEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHH
Confidence 9999875111011 011112221111 1 11111 0000 01223333322110 0 00000 00
Q ss_pred c---chhcc------------ccCCCCCCCCcc-CCCeeEeecCCCcccccccccchHHHHHHHHHHHHHHHHHhC
Q 009427 320 R---VIYGI------------FPTYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 379 (535)
Q Consensus 320 r---~~~g~------------~P~~~~~pl~~~-~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~~al~~ 379 (535)
+ ..++. ++... ...+.+ .+|++++|||||.++|++|||+|++++||..|+++|+..++.
T Consensus 244 ~~l~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g 318 (499)
T 2qa2_A 244 AAWQRLTGQDISHGEPVWVSAFGDPA-RQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSG 318 (499)
T ss_dssp HHHHHHHSCCCTTCEEEEEEEECCCE-EECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCCCccceeEEEEEeCCc-EEcccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcC
Confidence 0 01110 11100 001122 489999999999999999999999999999999999998853
No 7
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.91 E-value=1.3e-23 Score=227.06 Aligned_cols=265 Identities=17% Similarity=0.135 Sum_probs=160.9
Q ss_pred CCCcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCC-CcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCC--
Q 009427 107 AVGTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKG-REQEWNISRKELLELVESGILVEDDIDEATATKFNPN-- 182 (535)
Q Consensus 107 ~~~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~-~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~-- 182 (535)
.+.++||+||| ||+|+++|+.|+++|++|+||||.+... ..+...++...++.|.++|+.+ ++... ..+...
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~--~~~~~--~~~~~~~~ 83 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILP--RFGEV--ETSTQGHF 83 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGG--GGCSC--CBCCEEEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHH--HHHhc--cccccccc
Confidence 34479999999 9999999999999999999999986432 2233457778888888888743 11110 000000
Q ss_pred -cccccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCe---EEEcCeEEEccC
Q 009427 183 -RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK---ILSSHLIIDAMG 258 (535)
Q Consensus 183 -~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~---~i~a~lVV~AdG 258 (535)
...+... .........+.+++..+.+.|.+.+.+.|++++.+++|++++.+++++++++.++. +++||+||+|||
T Consensus 84 ~~~~~~~~-~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG 162 (500)
T 2qa1_A 84 GGLPIDFG-VLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDG 162 (500)
T ss_dssp TTEEEEGG-GSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCC
T ss_pred cceecccc-cCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCC
Confidence 0001000 00000112345778899999999999999999999999999999999988887653 799999999999
Q ss_pred CChHHHHHhCCCCCC-CCCceeEEEEEecCCCCCCC-hHHH--HHHHhhhccCccCC--------C------CCccc---
Q 009427 259 NFSPVVKQAFPAGSG-PLDRTTYMFTYIDPQAGSPK-LEEL--LERYWDLMPEYQGV--------T------LDNLE--- 317 (535)
Q Consensus 259 ~~S~v~~~~~p~~~~-~~~~~~~~~~y~~~~~~~~~-l~~~--~~~~~~~~P~~~~~--------~------~~~~~--- 317 (535)
.+|.+++++-....+ ......+..... . ...+. .... -.++++++|...+. . .....
T Consensus 163 ~~S~VR~~lg~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 240 (500)
T 2qa1_A 163 GRSSVRKAAGFDFPGTAATMEMYLADIK-G-VELQPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRETPPSWHE 240 (500)
T ss_dssp TTCHHHHHTTCCCCEECCCCEEEEEEEE-S-CCCCCEEEEEEETTEEEEEEEETTTEEEEEEEETTCCC-----CCCHHH
T ss_pred cchHHHHHcCCCcCCCccceEEEEEEEE-e-CCCCCceEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHH
Confidence 999999875111011 011111211111 1 11111 0000 01222233321110 0 00000
Q ss_pred hhc---chhcc------------ccCCCCCCCCcc-CCCeeEeecCCCcccccccccchHHHHHHHHHHHHHHHHHhC
Q 009427 318 IQR---VIYGI------------FPTYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 379 (535)
Q Consensus 318 ~~r---~~~g~------------~P~~~~~pl~~~-~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~~al~~ 379 (535)
+.+ ..++. ++... ...+.+ .+|++++|||||.++|++|||+|++++||..|+++|+..++.
T Consensus 241 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g 317 (500)
T 2qa1_A 241 VADAWKRLTGDDIAHAEPVWVSAFGNAT-RQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNG 317 (500)
T ss_dssp HHHHHHHHHSCCCTTSEEEEEEEEECCE-EECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCCCccceeEEEEeccCc-EEccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcC
Confidence 000 01110 11000 001122 489999999999999999999999999999999999988853
No 8
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.90 E-value=1.5e-22 Score=220.58 Aligned_cols=265 Identities=19% Similarity=0.103 Sum_probs=159.9
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCC-CcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCC-cc--
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKG-REQEWNISRKELLELVESGILVEDDIDEATATKFNPN-RC-- 184 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~-~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~-~~-- 184 (535)
++||+||| ||+|+++|+.|+++|++|+||||..... ..+...++...++.|.++|+. +++... ...+... .+
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~--~~~~~~-~~~~~~~~~~~~ 81 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVA--DEVVRA-DDIRGTQGDFVI 81 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCH--HHHHHS-CCSSCTTSCCEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCH--HHHHhh-CCCcccccceee
Confidence 69999999 9999999999999999999999986432 233445777888888888872 222211 0000000 00
Q ss_pred -ccc-ccCc-ce---------------eeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCC----eEEEEE
Q 009427 185 -GFE-GKGE-IW---------------VEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN----AAVLLL 242 (535)
Q Consensus 185 -~~~-~~~~-~~---------------~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~----gv~v~~ 242 (535)
.+. ..+. .. ......+.+++..+.+.|.+++.+.|++++++++|++++.+++ ++++++
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~ 161 (535)
T 3ihg_A 82 RLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARL 161 (535)
T ss_dssp EEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEE
T ss_pred eEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEE
Confidence 000 0000 00 0011134578999999999999999999999999999999888 888888
Q ss_pred cCC---eEEEcCeEEEccCCChHHHHHh-CCCCCCCCCcee-EEEEEecCCC----CCCChHHHH---HHHhhhccCccC
Q 009427 243 AEG---KILSSHLIIDAMGNFSPVVKQA-FPAGSGPLDRTT-YMFTYIDPQA----GSPKLEELL---ERYWDLMPEYQG 310 (535)
Q Consensus 243 ~~G---~~i~a~lVV~AdG~~S~v~~~~-~p~~~~~~~~~~-~~~~y~~~~~----~~~~l~~~~---~~~~~~~P~~~~ 310 (535)
.++ .+++||+||+|||.+|.+++++ ++. .++..... +.+.+....+ .++....++ +....++|....
T Consensus 162 ~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~ 240 (535)
T 3ihg_A 162 AGPDGEYDLRAGYLVGADGNRSLVRESLGIGR-YGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRP 240 (535)
T ss_dssp EETTEEEEEEEEEEEECCCTTCHHHHHTTCCE-EEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEECSST
T ss_pred EcCCCeEEEEeCEEEECCCCcchHHHHcCCCc-CCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEecCC
Confidence 765 6899999999999999998874 332 11000000 1111111000 000000000 001111121110
Q ss_pred --------------CCCCccc---hhc---chhcc------------ccCCCCCCCCcc-CCCeeEeecCCCcccccccc
Q 009427 311 --------------VTLDNLE---IQR---VIYGI------------FPTYRDSPLPAA-FNRILQFGDASGIQSPVSFG 357 (535)
Q Consensus 311 --------------~~~~~~~---~~r---~~~g~------------~P~~~~~pl~~~-~~rvlliGDAA~~~~P~~G~ 357 (535)
.....+. +.+ ..++. ++... ...+.+ .+|++++|||||.++|++||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~grv~LvGDAAH~~~P~~Gq 319 (535)
T 3ihg_A 241 DRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKPELVDIQGWEMAA-RIAERWREGRVFLAGDAAKVTPPTGGM 319 (535)
T ss_dssp TEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCCEEEEEEEEEEEE-EEESCSEETTEEECTTTTEECCSTTSC
T ss_pred CEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCceeEEEeeEeeeeE-EEECccccCCEEEEecccccCCCccCC
Confidence 0000110 000 01110 01000 001122 49999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHhC
Q 009427 358 GFGSLTRHLGRLSTGVYEAVRG 379 (535)
Q Consensus 358 Gi~~al~da~~La~~l~~al~~ 379 (535)
|+|++++||..|+++|+..++.
T Consensus 320 G~n~ai~DA~~La~~La~~l~g 341 (535)
T 3ihg_A 320 SGNAAVADGFDLAWKLAAVLQG 341 (535)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccHHHHHHHHHHHhcC
Confidence 9999999999999999998854
No 9
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.90 E-value=2.6e-23 Score=217.28 Aligned_cols=155 Identities=23% Similarity=0.254 Sum_probs=102.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCc-ccc--cccHHHHHHHHHcCCCChHhHHHHHh-hhcCCCccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGRE-QEW--NISRKELLELVESGILVEDDIDEATA-TKFNPNRCG 185 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~-~~~--~is~~~l~~L~~lGl~~~~~~~~~~~-~~~~~~~~~ 185 (535)
.+|+||| ||+|+++|+.|+++|++|+|+||.+..... +.. .++...++.|.++|+. +.+..... ..+......
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~--~~~~~~~~~~~~~~~~~~ 79 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPA--ENWLAFEEASRYIGGQSR 79 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCH--HHHHHHHHHCEEECCCCE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCCh--HHHHHhhhhhcccCccee
Confidence 4799999 999999999999999999999998643321 112 2456667777777862 22221111 111000000
Q ss_pred ccc--------cC---c--ceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCC-eEEEEEcCCeEEEcC
Q 009427 186 FEG--------KG---E--IWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSH 251 (535)
Q Consensus 186 ~~~--------~~---~--~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~-gv~v~~~~G~~i~a~ 251 (535)
+.. .. . ........+.+++..|.+.|.+.+ +..|+++++|++++..++ +++|+++||++++||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~ad 156 (412)
T 4hb9_A 80 FYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVD 156 (412)
T ss_dssp EECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTSCEEEEETTSCEEEES
T ss_pred EecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEee
Confidence 000 00 0 000011123467777877776543 456889999999987655 588999999999999
Q ss_pred eEEEccCCChHHHHHhCCC
Q 009427 252 LIIDAMGNFSPVVKQAFPA 270 (535)
Q Consensus 252 lVV~AdG~~S~v~~~~~p~ 270 (535)
+||+|||.+|.+++++++.
T Consensus 157 lvVgADG~~S~vR~~l~~~ 175 (412)
T 4hb9_A 157 VLVGADGSNSKVRKQYLPF 175 (412)
T ss_dssp EEEECCCTTCHHHHHHSTT
T ss_pred EEEECCCCCcchHHHhCCC
Confidence 9999999999999998765
No 10
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.90 E-value=7.2e-23 Score=215.59 Aligned_cols=266 Identities=17% Similarity=0.157 Sum_probs=159.0
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCC-ccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPN-RCGFE 187 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~-~~~~~ 187 (535)
++||+||| |++|+++|+.|+++|++|+||||...+.......+....++.+.++|+. +.+... .+... ...+.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~--~~~~~~---~~~~~~~~~~~ 79 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFL--DAVKAQ---GFQQKFGAKFV 79 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCH--HHHHHT---TCEEECEEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCCh--HHHHHc---CCcccCCcEEE
Confidence 59999999 9999999999999999999999986544222223444445555556762 222211 11100 01110
Q ss_pred ccC---------cceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEE--EEcCCe--EEEcCeEE
Q 009427 188 GKG---------EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVL--LLAEGK--ILSSHLII 254 (535)
Q Consensus 188 ~~~---------~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v--~~~~G~--~i~a~lVV 254 (535)
... .........+.+++..+.+.|.+.+.+.|++++++++|++++.+++++++ .+.+|+ +++||+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV 159 (421)
T 3nix_A 80 RGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFII 159 (421)
T ss_dssp ETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEE
T ss_pred eCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEE
Confidence 000 00000122356899999999999999999999999999999988777544 446776 69999999
Q ss_pred EccCCChHHHHHhCCCCCCCCCceeEEEE-EecCCCCCCChH------H----HHHHHhhhccCccCC-------C---C
Q 009427 255 DAMGNFSPVVKQAFPAGSGPLDRTTYMFT-YIDPQAGSPKLE------E----LLERYWDLMPEYQGV-------T---L 313 (535)
Q Consensus 255 ~AdG~~S~v~~~~~p~~~~~~~~~~~~~~-y~~~~~~~~~l~------~----~~~~~~~~~P~~~~~-------~---~ 313 (535)
+|||.+|.+++..-.............+. +..... .+... . .-.+|+|.+|...+. . .
T Consensus 160 ~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~ 238 (421)
T 3nix_A 160 DASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKR-PVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPSYF 238 (421)
T ss_dssp ECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTC-CC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECHHHH
T ss_pred ECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcC-CCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecHHHh
Confidence 99999998876631110000011112222 221111 11000 0 012455666654321 0 0
Q ss_pred C----cc-chhcchh-------------------ccccCCCCCCCCccCCCeeEeecCCCcccccccccchHHHHHHHHH
Q 009427 314 D----NL-EIQRVIY-------------------GIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRL 369 (535)
Q Consensus 314 ~----~~-~~~r~~~-------------------g~~P~~~~~pl~~~~~rvlliGDAA~~~~P~~G~Gi~~al~da~~L 369 (535)
+ .. ...+... ..++.+.....+...+|+++||||||.++|++|+|++.++.++..|
T Consensus 239 ~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~l 318 (421)
T 3nix_A 239 DEYTGTPEERMRAMIANEGHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKG 318 (421)
T ss_dssp TTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHH
T ss_pred hhcCCCHHHHHHHHHHhCcHHHHHHhcCccccCceeecccceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHHH
Confidence 0 00 0000000 0011111001112259999999999999999999999999999999
Q ss_pred HHHHHHHHhCCC
Q 009427 370 STGVYEAVRGDF 381 (535)
Q Consensus 370 a~~l~~al~~~~ 381 (535)
++.|.+++..+.
T Consensus 319 a~~l~~~~~~~~ 330 (421)
T 3nix_A 319 GKLAVQFLKGEE 330 (421)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHhcCCc
Confidence 999999886543
No 11
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.90 E-value=6.5e-23 Score=214.33 Aligned_cols=265 Identities=14% Similarity=0.120 Sum_probs=155.0
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCC---CCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLK---GREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~---~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~ 185 (535)
++||+||| ||+|+++|+.|++.|++|+|+||.... ...+...++...++.|.++|+.+ .+... ..... ...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~--~~~~~-~~~~~--~~~ 76 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDR--RMARD-GLVHE--GVE 76 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCH--HHHHH-CEEES--CEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcH--HHHhc-CCccc--eEE
Confidence 48999999 999999999999999999999998531 11223346677777787889742 22221 11111 111
Q ss_pred ccccCcceee-------eccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeC-CeEEEEE-cCCe--EEEcCeEE
Q 009427 186 FEGKGEIWVE-------DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAVLLL-AEGK--ILSSHLII 254 (535)
Q Consensus 186 ~~~~~~~~~~-------~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~-~gv~v~~-~~G~--~i~a~lVV 254 (535)
+...+..... ....+.+++..+.+.|.+.+.+.|++++.+++|++++.++ +++.|++ .+|+ +++||+||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV 156 (394)
T 1k0i_A 77 IAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIA 156 (394)
T ss_dssp EEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEE
T ss_pred EEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEE
Confidence 1101100000 1112345778888999999988899999999999997653 4577776 6786 79999999
Q ss_pred EccCCChHHHHHhCCCCCCCCCceeEEEEEec----CCCCCCChHH-HH-HHHhhhccCccC---C--------CCCcc-
Q 009427 255 DAMGNFSPVVKQAFPAGSGPLDRTTYMFTYID----PQAGSPKLEE-LL-ERYWDLMPEYQG---V--------TLDNL- 316 (535)
Q Consensus 255 ~AdG~~S~v~~~~~p~~~~~~~~~~~~~~y~~----~~~~~~~l~~-~~-~~~~~~~P~~~~---~--------~~~~~- 316 (535)
+|||.+|.++++.... ..+.....+.+.+.. ..+..+.... .. .++.++.|...+ . .....
T Consensus 157 ~AdG~~S~vr~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T 1k0i_A 157 GCDGFHGISRQSIPAE-RLKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATRSQYYVQVPLSEKVEDWS 235 (394)
T ss_dssp ECCCTTCSTGGGSCGG-GCEEEEEEEEEEEEEEEESSCCSCSSCEEECCTTCCEEEEEEETTEEEEEEEECTTCCGGGCC
T ss_pred ECCCCCcHHHHhcCcc-ccccccccccceeEEEecCCCCCccceEEEEcCCceEEEEecCCCcEEEEEEeCCCCCccccC
Confidence 9999999988774221 100001111122211 1111111000 00 112222221110 0 00000
Q ss_pred --chh---cchh-c---------------cccCCCCCCCCccCCCeeEeecCCCcccccccccchHHHHHHHHHHHHHHH
Q 009427 317 --EIQ---RVIY-G---------------IFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYE 375 (535)
Q Consensus 317 --~~~---r~~~-g---------------~~P~~~~~pl~~~~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~~ 375 (535)
... +..+ + .+|.......+...+|++++|||||.++|++|||+|.+++||..|++.|.+
T Consensus 236 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~ 315 (394)
T 1k0i_A 236 DERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLK 315 (394)
T ss_dssp HHHHHHHHHHTSCHHHHHHCCCCCEEEEEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCcccccccccCcceeeEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHH
Confidence 000 0000 0 011100000011258999999999999999999999999999999999988
Q ss_pred HHhCC
Q 009427 376 AVRGD 380 (535)
Q Consensus 376 al~~~ 380 (535)
++..+
T Consensus 316 ~~~~~ 320 (394)
T 1k0i_A 316 AYREG 320 (394)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 77543
No 12
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.89 E-value=4.6e-23 Score=215.94 Aligned_cols=262 Identities=15% Similarity=0.076 Sum_probs=157.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCC-CcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKG-REQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~-~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
++||+||| |++|+++|+.|+++|++|+||||.+... ......++....+.+.++|+. +.+... ...+. ...+.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~--~~~~~~-~~~~~--~~~~~ 80 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLL--AEVTRR-GGRVR--HELEV 80 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCH--HHHHHT-TCEEE--CEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcH--HHHHHh-CCCcc--eeEEE
Confidence 58999999 9999999999999999999999985431 122233566667777777862 222211 11010 11110
Q ss_pred c-cCc-cee-------eeccccccCHHHHHHHHHHHHHhC-CCEEEeCceEEEEEEeCCeE--EEEEcCCeEEEcCeEEE
Q 009427 188 G-KGE-IWV-------EDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAA--VLLLAEGKILSSHLIID 255 (535)
Q Consensus 188 ~-~~~-~~~-------~~~~~~~v~~~~l~~~L~~~a~~~-G~~i~~~~~V~~i~~~~~gv--~v~~~~G~~i~a~lVV~ 255 (535)
. .+. ... .....+.+++..+.+.|.+.+.+. |++++.+++|++++.+++++ .|++++|++++||+||+
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~ 160 (399)
T 2x3n_A 81 YHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVG 160 (399)
T ss_dssp EETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEE
T ss_pred eCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEE
Confidence 0 010 000 011235588999999999999988 89999999999998888888 88888888899999999
Q ss_pred ccCCChHHHHHhCCCCCCCC--Ccee--EEEE--EecCCCCCCChHHHH---HHHhhhccCccC----------------
Q 009427 256 AMGNFSPVVKQAFPAGSGPL--DRTT--YMFT--YIDPQAGSPKLEELL---ERYWDLMPEYQG---------------- 310 (535)
Q Consensus 256 AdG~~S~v~~~~~p~~~~~~--~~~~--~~~~--y~~~~~~~~~l~~~~---~~~~~~~P~~~~---------------- 310 (535)
|||.+|.+++..-..... . .... ..+. +....+.. . ..+ +++++++|....
T Consensus 161 AdG~~s~vr~~lg~~~~~-~~p~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 236 (399)
T 2x3n_A 161 ADGIASYVRRRLLDIDVE-RRPYPSPMLVGTFALAPCVAERN--R-LYVDSQGGLAYFYPIGFDRARLVVSFPREEAREL 236 (399)
T ss_dssp CCCTTCHHHHHTSCCCCC-CCCCSSCEEEEEEECCHHHHHCE--E-EEECTTSCEEEEEEETTTEEEEEEECCHHHHHHH
T ss_pred CCCCChHHHHHhCCCccc-cCCCCCCceEEEEEEecCCCCCc--c-EEEcCCCcEEEEEEcCCCEEEEEEEeCccccccc
Confidence 999999988864222111 1 1111 1111 10000000 0 000 011111110000
Q ss_pred ---CC-----------CCcc--chhcc----hhccccCCCCCCCCcc-CCCeeEeecCCCcccccccccchHHHHHHHHH
Q 009427 311 ---VT-----------LDNL--EIQRV----IYGIFPTYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRL 369 (535)
Q Consensus 311 ---~~-----------~~~~--~~~r~----~~g~~P~~~~~pl~~~-~~rvlliGDAA~~~~P~~G~Gi~~al~da~~L 369 (535)
.. .+.+ ...+. ....+|.....+.+.+ .+|++++|||||.++|++|||+|.+++||..|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~L 316 (399)
T 2x3n_A 237 MADTRGESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASAL 316 (399)
T ss_dssp HHSTTSHHHHHHHHTTCCGGGHHHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHhhcCCcchhhHHhcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHHHHHHHH
Confidence 00 0000 00000 0011222211112222 49999999999999999999999999999999
Q ss_pred HHHHHHHHhCC
Q 009427 370 STGVYEAVRGD 380 (535)
Q Consensus 370 a~~l~~al~~~ 380 (535)
++.|.+.++.+
T Consensus 317 a~~L~~~~~~~ 327 (399)
T 2x3n_A 317 ADALDLALRDA 327 (399)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHhhhccc
Confidence 99999887643
No 13
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.89 E-value=6.3e-23 Score=222.45 Aligned_cols=265 Identities=18% Similarity=0.214 Sum_probs=157.3
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHH-HHHHcCCCChHhHHHHHhhhcCCC---cc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELL-ELVESGILVEDDIDEATATKFNPN---RC 184 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~-~L~~lGl~~~~~~~~~~~~~~~~~---~~ 184 (535)
++|||||| |++|+++|+.|+++|++|+||||...+.......+...... .+..+|+. +.+.. ..+... ..
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~--~~~~~---~~~~~~~~~~~ 81 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLT--DEMKR---AGFPIKRGGTF 81 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCH--HHHHT---TTCCEECEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcH--HHHHH---cCCccccCceE
Confidence 59999999 99999999999999999999999975433222223333332 34445762 11111 111100 00
Q ss_pred cccccCcc---------eeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeE---EEEEcCC--eEEEc
Q 009427 185 GFEGKGEI---------WVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA---VLLLAEG--KILSS 250 (535)
Q Consensus 185 ~~~~~~~~---------~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv---~v~~~~G--~~i~a 250 (535)
.+...... .......+.+++..+.+.|.+.+.+.|++++++++|+++..+++.+ ++...+| .+++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~a 161 (512)
T 3e1t_A 82 RWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHA 161 (512)
T ss_dssp ECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEE
T ss_pred EecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEc
Confidence 01000000 0011224568899999999999999999999999999999887754 4444567 37999
Q ss_pred CeEEEccCCChHHHHHhCCCCCC-CCCceeEEEEEecC-C-CCCCC----hHH-HHHHHhhhccCccCC----------C
Q 009427 251 HLIIDAMGNFSPVVKQAFPAGSG-PLDRTTYMFTYIDP-Q-AGSPK----LEE-LLERYWDLMPEYQGV----------T 312 (535)
Q Consensus 251 ~lVV~AdG~~S~v~~~~~p~~~~-~~~~~~~~~~y~~~-~-~~~~~----l~~-~~~~~~~~~P~~~~~----------~ 312 (535)
|+||+|||.+|.++++. +.... ..........+... . ...+. ... .-.+++|++|...+. .
T Consensus 162 d~VI~AdG~~S~vr~~l-g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~ 240 (512)
T 3e1t_A 162 RFIVDASGNRTRVSQAV-GERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREA 240 (512)
T ss_dssp EEEEECCCTTCSSGGGT-CCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEHHH
T ss_pred CEEEECCCcchHHHHHc-CCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecHHH
Confidence 99999999999998875 22110 01111112222211 0 01110 000 113456666755421 0
Q ss_pred CCc----c-c-hhcc------hh--------------ccccCCCC--CCCCc-cCCCeeEeecCCCcccccccccchHHH
Q 009427 313 LDN----L-E-IQRV------IY--------------GIFPTYRD--SPLPA-AFNRILQFGDASGIQSPVSFGGFGSLT 363 (535)
Q Consensus 313 ~~~----~-~-~~r~------~~--------------g~~P~~~~--~pl~~-~~~rvlliGDAA~~~~P~~G~Gi~~al 363 (535)
.+. . . +.+. +. +.++.... .+.+. +.+|+++||||||.++|++|||++.++
T Consensus 241 ~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al 320 (512)
T 3e1t_A 241 AEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLAT 320 (512)
T ss_dssp HTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHH
T ss_pred hhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHH
Confidence 000 0 0 0000 00 00110000 01122 258999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCC
Q 009427 364 RHLGRLSTGVYEAVRGD 380 (535)
Q Consensus 364 ~da~~La~~l~~al~~~ 380 (535)
+|+..|++.|.+.+..+
T Consensus 321 ~dA~~La~~L~~~l~~~ 337 (512)
T 3e1t_A 321 YSALLVARAINTCLAGE 337 (512)
T ss_dssp HHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 99999999999887543
No 14
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.88 E-value=2.1e-22 Score=221.39 Aligned_cols=269 Identities=15% Similarity=0.136 Sum_probs=162.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhh-------hcCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATAT-------KFNP 181 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~-------~~~~ 181 (535)
++|||||| |++|+++|+.|+++|++|+|||+...+.......+.....+.+..+|+. +.+...-.. .+..
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~--~~l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQ--EKIDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCH--HHHHHHCCEEECEEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCc--HHHHhcCCcccCCcEEEecC
Confidence 58999999 9999999999999999999999997654433334566666777777873 222221100 0000
Q ss_pred C----cccccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEe-CCeEEEEEc-CC--eEEEcCeE
Q 009427 182 N----RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY-ENAAVLLLA-EG--KILSSHLI 253 (535)
Q Consensus 182 ~----~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~-~~gv~v~~~-~G--~~i~a~lV 253 (535)
. ...+.............+.+++..+.+.|.+.+.+.|++++++++|+++..+ ++.+.|.+. +| .+++||+|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlV 180 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFV 180 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEE
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEE
Confidence 0 0000000000000112456899999999999999999999999999999765 445667776 66 57999999
Q ss_pred EEccCCChHHHHHhCCCCCCCCCceeEEEEE-ecCCCC-CC---Ch-HH-HHHHHhhhccCccCC-------CCCccc--
Q 009427 254 IDAMGNFSPVVKQAFPAGSGPLDRTTYMFTY-IDPQAG-SP---KL-EE-LLERYWDLMPEYQGV-------TLDNLE-- 317 (535)
Q Consensus 254 V~AdG~~S~v~~~~~p~~~~~~~~~~~~~~y-~~~~~~-~~---~l-~~-~~~~~~~~~P~~~~~-------~~~~~~-- 317 (535)
|+|||.+|.++++.-.............+.+ ...... .+ .. .. .-.+++|.+|...+. ..+...
T Consensus 181 V~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~~~l 260 (591)
T 3i3l_A 181 IDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVVDRSKSAEV 260 (591)
T ss_dssp EECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEEEGGGHHHH
T ss_pred EECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEcCHHHHhhh
Confidence 9999999999887422100000000111122 111110 11 00 00 113556777754321 000000
Q ss_pred -------hhcchh-----------cc--------ccCCCCCCCCc-cCCCeeEeecCCCcccccccccchHHHHHHHHHH
Q 009427 318 -------IQRVIY-----------GI--------FPTYRDSPLPA-AFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLS 370 (535)
Q Consensus 318 -------~~r~~~-----------g~--------~P~~~~~pl~~-~~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La 370 (535)
+.+... +. ++.+. ...+. ..+|+++||||||.++|++|||++.+++|+..|+
T Consensus 261 ~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA 339 (591)
T 3i3l_A 261 REQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWS-YDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAA 339 (591)
T ss_dssp HHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEE-EEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhCHHHHHHHhcCccccCceEecccc-cchhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHH
Confidence 000000 00 00000 00122 2599999999999999999999999999999999
Q ss_pred HHHHHHHhCCC
Q 009427 371 TGVYEAVRGDF 381 (535)
Q Consensus 371 ~~l~~al~~~~ 381 (535)
+.|.+++..+.
T Consensus 340 ~~L~~~l~~~~ 350 (591)
T 3i3l_A 340 AAIDRITRHGD 350 (591)
T ss_dssp HHHHHHHHCGG
T ss_pred HHHHHHHhCCc
Confidence 99999887543
No 15
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.87 E-value=2.1e-21 Score=216.62 Aligned_cols=263 Identities=17% Similarity=0.219 Sum_probs=157.4
Q ss_pred cccEEEEc-chHHHHHHHHHHH-----CCCcEEEEcccCCCC-CcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSF-----KGLRVAIVERNTLKG-REQEWNISRKELLELVESGILVEDDIDEATATKFNPN 182 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr-----~G~~V~liEr~~~~~-~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~ 182 (535)
++||+||| ||+|+++|+.|++ .|++|+||||.+... ..+...++...++.|.++|+. +++. .......
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~--~~l~---~~~~~~~ 82 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLA--DKIL---SEANDMS 82 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCH--HHHH---TTCBCCC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCH--HHHH---Hhccccc
Confidence 58999999 9999999999999 999999999985322 223345778888888888973 2221 1111111
Q ss_pred cccccc-c--Ccce-----------eeeccccccCHHHHHHHHHHHHHhCC---CEEEeCceEEEEEEeC--------Ce
Q 009427 183 RCGFEG-K--GEIW-----------VEDILNLGVSPAKLIEIVKKRFISLG---GVIFEGYSVSSICTYE--------NA 237 (535)
Q Consensus 183 ~~~~~~-~--~~~~-----------~~~~~~~~v~~~~l~~~L~~~a~~~G---~~i~~~~~V~~i~~~~--------~g 237 (535)
.+.+.. . +... ........+++..+.+.|.+.+.+.| +++..+++|++++.++ ++
T Consensus 83 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~ 162 (665)
T 1pn0_A 83 TIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYP 162 (665)
T ss_dssp EEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCC
T ss_pred eEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCC
Confidence 111110 0 0000 00111244788999999999998877 8999999999998765 35
Q ss_pred EEEEEc------------------------------------------CC--eEEEcCeEEEccCCChHHHHHhCCCCCC
Q 009427 238 AVLLLA------------------------------------------EG--KILSSHLIIDAMGNFSPVVKQAFPAGSG 273 (535)
Q Consensus 238 v~v~~~------------------------------------------~G--~~i~a~lVV~AdG~~S~v~~~~~p~~~~ 273 (535)
+++++. +| ++++||+||+|||++|.+|+++-....+
T Consensus 163 V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g 242 (665)
T 1pn0_A 163 VTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIG 242 (665)
T ss_dssp EEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEE
T ss_pred EEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCC
Confidence 776553 35 5799999999999999999985221111
Q ss_pred CCCceeEEEEEecCC--CCCCChHH---H---HHHHhhhccCccCC---------C--------CCccc---hhc---ch
Q 009427 274 PLDRTTYMFTYIDPQ--AGSPKLEE---L---LERYWDLMPEYQGV---------T--------LDNLE---IQR---VI 322 (535)
Q Consensus 274 ~~~~~~~~~~y~~~~--~~~~~l~~---~---~~~~~~~~P~~~~~---------~--------~~~~~---~~r---~~ 322 (535)
....+.+.+.+.. ...+.... + -.++++++|...+. . ..... +.+ ..
T Consensus 243 --~~~~~~~~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~ 320 (665)
T 1pn0_A 243 --EQTDYIWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKI 320 (665)
T ss_dssp --EEEEEEEEEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHH
T ss_pred --CCccEEEEEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHH
Confidence 0111111121110 01111100 0 01222333332110 0 00000 000 01
Q ss_pred hcc----------ccCCC--CCCCCcc--CCCeeEeecCCCcccccccccchHHHHHHHHHHHHHHHHHhC
Q 009427 323 YGI----------FPTYR--DSPLPAA--FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 379 (535)
Q Consensus 323 ~g~----------~P~~~--~~pl~~~--~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~~al~~ 379 (535)
++. ...+. ....+.+ .+||+|+|||||.++|+.|||+|++|+||..|+++|+..++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g 391 (665)
T 1pn0_A 321 FHPYTFDVQQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTG 391 (665)
T ss_dssp HTTSCCEEEEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hCcccCceeeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcC
Confidence 110 00000 0011222 489999999999999999999999999999999999998863
No 16
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.87 E-value=3.2e-21 Score=210.80 Aligned_cols=263 Identities=14% Similarity=0.138 Sum_probs=155.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCC-CcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCC--Cccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKG-REQEWNISRKELLELVESGILVEDDIDEATATKFNP--NRCG 185 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~-~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~--~~~~ 185 (535)
++||+||| ||+|+++|+.|+++|++|+||||..... ..+...+....++.|.++|+. +.+.... ..... ....
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~--~~~~~~~-~~~~~~~~~~~ 102 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVA--KQIRTAG-WPGDHPLDAAW 102 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCH--HHHHTSS-CCTTSBCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCCh--HHHHhhc-CCcccccceEE
Confidence 58999999 9999999999999999999999985432 223345677788888888872 2221110 00000 0000
Q ss_pred ccc-cCc-ce--------------eeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcC---C-
Q 009427 186 FEG-KGE-IW--------------VEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE---G- 245 (535)
Q Consensus 186 ~~~-~~~-~~--------------~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~---G- 245 (535)
+.. .+. .. ......+.+++..+.+.|.+.+.+. ++++++|++++.+++++++++.+ |
T Consensus 103 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~ 179 (549)
T 2r0c_A 103 VTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGA 179 (549)
T ss_dssp ESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCC
T ss_pred eccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCC
Confidence 000 000 00 0011224578888999999998876 89999999999888888887755 6
Q ss_pred -eEEEcCeEEEccCCChHHHHHh-CCCCCCCCCceeEE-EEEecC-C----CCCCChHHHH---H-HHhhhccCccC--C
Q 009427 246 -KILSSHLIIDAMGNFSPVVKQA-FPAGSGPLDRTTYM-FTYIDP-Q----AGSPKLEELL---E-RYWDLMPEYQG--V 311 (535)
Q Consensus 246 -~~i~a~lVV~AdG~~S~v~~~~-~p~~~~~~~~~~~~-~~y~~~-~----~~~~~l~~~~---~-~~~~~~P~~~~--~ 311 (535)
.+++||+||+|||.+|.+++++ ++. .+......+. ..+... . ...+....++ + .++.++|.... .
T Consensus 180 ~~~i~a~~vVgADG~~S~vR~~lg~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~ 258 (549)
T 2r0c_A 180 TRAVHARYLVACDGASSPTRKALGIDA-PPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRGLY 258 (549)
T ss_dssp EEEEEEEEEEECCCTTCHHHHHHTCCC-CBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSSEE
T ss_pred EEEEEeCEEEECCCCCcHHHHHcCCCC-CCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCcEE
Confidence 4799999999999999999885 222 1111111111 122211 0 0000000000 1 11222232110 0
Q ss_pred ------C---CCccchh---cchhcc-ccC-------CC--CCCCCcc-CCCeeEeecCCCcccccccccchHHHHHHHH
Q 009427 312 ------T---LDNLEIQ---RVIYGI-FPT-------YR--DSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGR 368 (535)
Q Consensus 312 ------~---~~~~~~~---r~~~g~-~P~-------~~--~~pl~~~-~~rvlliGDAA~~~~P~~G~Gi~~al~da~~ 368 (535)
. .+.-.+. +..++. ++. +. ....+.+ .+|++++|||||.++|++|||+|++++||..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~ 338 (549)
T 2r0c_A 259 RLTVGVDDASKSTMDSFELVRRAVAFDTEIEVLSDSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAAD 338 (549)
T ss_dssp EEEEECSTTCCSCCCHHHHHHHHBCSCCCCEEEEEEEEEECCEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHHhCCCCceeEEEEecchhHhhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHH
Confidence 0 0000011 111111 110 00 0011222 4999999999999999999999999999999
Q ss_pred HHHHHHHHHhC
Q 009427 369 LSTGVYEAVRG 379 (535)
Q Consensus 369 La~~l~~al~~ 379 (535)
|+++|+..++.
T Consensus 339 La~~La~~l~g 349 (549)
T 2r0c_A 339 LGWKLAATLRG 349 (549)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHcC
Confidence 99999988864
No 17
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.87 E-value=5.3e-21 Score=212.68 Aligned_cols=157 Identities=18% Similarity=0.214 Sum_probs=108.4
Q ss_pred CcccEEEEc-chHHHHHHHHHHH-CCCcEEEEcccCCCC-CcccccccHHHHHHHHHcCCCChHhHHHHHh-----hhcC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSF-KGLRVAIVERNTLKG-REQEWNISRKELLELVESGILVEDDIDEATA-----TKFN 180 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr-~G~~V~liEr~~~~~-~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~-----~~~~ 180 (535)
.++||+||| ||+|+++|+.|++ .|++|+||||..... ..+...++...++.|.++|+. +++..... ..|.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~--~~~~~~~~~~~~~~~~~ 108 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFA--DSILKEACWINDVTFWK 108 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCH--HHHHHHSEEECEEEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcH--HHHHHhcccccceEEEC
Confidence 469999999 9999999999999 999999999985432 223345777888888888873 22222110 0111
Q ss_pred C-----Ccccccc--c-CcceeeeccccccCHHHHHHHHHHHHHhCCC--EEEeCceEEEEEEeCC----eEEEEEc---
Q 009427 181 P-----NRCGFEG--K-GEIWVEDILNLGVSPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN----AAVLLLA--- 243 (535)
Q Consensus 181 ~-----~~~~~~~--~-~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~--~i~~~~~V~~i~~~~~----gv~v~~~--- 243 (535)
+ +.+.... . ..........+.+++..+.+.|.+.+.+.|+ +++.+++|++++.+++ +++|+++
T Consensus 109 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~ 188 (639)
T 2dkh_A 109 PDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCD 188 (639)
T ss_dssp ECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECS
T ss_pred CCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecc
Confidence 0 1000000 0 0000001112357889999999999999987 9999999999987753 5777664
Q ss_pred ---CC--eEEEcCeEEEccCCChHHHHHh
Q 009427 244 ---EG--KILSSHLIIDAMGNFSPVVKQA 267 (535)
Q Consensus 244 ---~G--~~i~a~lVV~AdG~~S~v~~~~ 267 (535)
+| .+++||+||+|||.+|.+++++
T Consensus 189 ~~~~G~~~~i~a~~vVgADG~~S~vR~~l 217 (639)
T 2dkh_A 189 AAHAGQIETVQARYVVGCDGARSNVRRAI 217 (639)
T ss_dssp GGGTTCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred ccCCCCeEEEEeCEEEECCCcchHHHHHh
Confidence 45 5799999999999999998874
No 18
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.86 E-value=7.7e-21 Score=200.03 Aligned_cols=155 Identities=22% Similarity=0.333 Sum_probs=108.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCc-EEEEcccCCCCC-cccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLR-VAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~-V~liEr~~~~~~-~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
++||+||| ||+|+++|+.|+++|++ |+||||....+. .....+....++.|.++|+. +.+..... .. ....+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~--~~l~~~~~-~~--~~~~~ 78 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLG--PALAATAI-PT--HELRY 78 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCH--HHHHHHSE-EE--CEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCCh--HHHHhhCC-Cc--ceEEE
Confidence 58999999 99999999999999999 999999864322 22234567777778777872 22322111 00 01111
Q ss_pred cc-cCc-cee--------eeccccccCHHHHHHHHHHHHHh-CC-CEEEeCceEEEEEEeCCeEEEEEcC---C--eEEE
Q 009427 187 EG-KGE-IWV--------EDILNLGVSPAKLIEIVKKRFIS-LG-GVIFEGYSVSSICTYENAAVLLLAE---G--KILS 249 (535)
Q Consensus 187 ~~-~~~-~~~--------~~~~~~~v~~~~l~~~L~~~a~~-~G-~~i~~~~~V~~i~~~~~gv~v~~~~---G--~~i~ 249 (535)
.. .+. .+. .....+.+++..|.+.|.+.+.+ .| ++++.+++|++++. ++++++++.+ | .+++
T Consensus 79 ~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ 157 (410)
T 3c96_A 79 IDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALG 157 (410)
T ss_dssp ECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEE
T ss_pred EcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEe
Confidence 00 010 000 01112457888999999999876 36 48999999999988 6778887765 7 5799
Q ss_pred cCeEEEccCCChHHHHHhCCC
Q 009427 250 SHLIIDAMGNFSPVVKQAFPA 270 (535)
Q Consensus 250 a~lVV~AdG~~S~v~~~~~p~ 270 (535)
||+||+|||.+|.+++++.+.
T Consensus 158 ad~vV~AdG~~S~vR~~l~~~ 178 (410)
T 3c96_A 158 ADVLVGADGIHSAVRAHLHPD 178 (410)
T ss_dssp ESEEEECCCTTCHHHHHHCTT
T ss_pred cCEEEECCCccchhHHHhcCC
Confidence 999999999999999987654
No 19
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.86 E-value=4.7e-21 Score=200.81 Aligned_cols=150 Identities=17% Similarity=0.119 Sum_probs=105.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCc--ccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGRE--QEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~--~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
.+||+||| |++|+++|+.|+++|++|+|+||.+..... ....++...++.|.++|+.+ . ..........+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~------~~~~~~~~~~~ 77 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-D------SISVPSSSMEY 77 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-G------GTCBCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-c------cccccccceEE
Confidence 58999999 999999999999999999999998642111 22235677777787788743 1 01111111111
Q ss_pred cc--cCccee-eeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChHH
Q 009427 187 EG--KGEIWV-EDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 187 ~~--~~~~~~-~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~v 263 (535)
.. .+.... .......++...+.+.|.+.+ .|++++.+++|++++.++++++|++.+|++++||+||+|||.+|.+
T Consensus 78 ~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 78 VDALTGERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EETTTCCEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCHH
T ss_pred EecCCCCccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchhH
Confidence 11 111110 011112245667778887765 4889999999999998888899999888889999999999999999
Q ss_pred HHHhC
Q 009427 264 VKQAF 268 (535)
Q Consensus 264 ~~~~~ 268 (535)
+++..
T Consensus 156 r~~~~ 160 (397)
T 2vou_A 156 RKRLL 160 (397)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 98865
No 20
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.85 E-value=2.1e-20 Score=205.66 Aligned_cols=285 Identities=21% Similarity=0.253 Sum_probs=157.9
Q ss_pred cccEEEEc-chHHHHHHHHHHHC------CCcEEEEcccCCCCCc--ccccccHHHHHHHHHcCCCChHhHHHHH---hh
Q 009427 110 TFDVIVCG-GTLGIFIATALSFK------GLRVAIVERNTLKGRE--QEWNISRKELLELVESGILVEDDIDEAT---AT 177 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~------G~~V~liEr~~~~~~~--~~~~is~~~l~~L~~lGl~~~~~~~~~~---~~ 177 (535)
++|||||| ||+|+++|+.|++. |++|+||||....+.. ....+....++.| + . .+...- ..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l----l-~--~~~~~g~~~~~ 107 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL----F-P--DWKEKGAPLNT 107 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH----C-T--THHHHTCCCCE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH----H-H--HHHhcCCceee
Confidence 58999999 99999999999999 9999999998644322 1112444555554 1 1 011100 00
Q ss_pred hcCCCcccccccCcce---------eeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe-EE-EEEc---
Q 009427 178 KFNPNRCGFEGKGEIW---------VEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AV-LLLA--- 243 (535)
Q Consensus 178 ~~~~~~~~~~~~~~~~---------~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g-v~-v~~~--- 243 (535)
......+.+....... ......+.+++..|.+.|.+++.+.|++|+.+++|+++..++++ ++ |.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g 187 (584)
T 2gmh_A 108 PVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVG 187 (584)
T ss_dssp ECCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEE
T ss_pred eechhheeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCcc
Confidence 0000011111000000 00112456788999999999999999999999999999877654 43 5554
Q ss_pred ---CC---------eEEEcCeEEEccCCChHHHHHh---CCCCCCCCCceeEEEEEec---CCCC--CCCh-HH------
Q 009427 244 ---EG---------KILSSHLIIDAMGNFSPVVKQA---FPAGSGPLDRTTYMFTYID---PQAG--SPKL-EE------ 296 (535)
Q Consensus 244 ---~G---------~~i~a~lVV~AdG~~S~v~~~~---~p~~~~~~~~~~~~~~y~~---~~~~--~~~l-~~------ 296 (535)
+| .+++||+||+|||.+|.+++++ +..... .+...+...+.. .... .+.. ..
T Consensus 188 ~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~-~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~ 266 (584)
T 2gmh_A 188 IQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRAN-CEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPL 266 (584)
T ss_dssp ECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTT-SCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTS
T ss_pred ccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCC-CCchhHHhhhhhheecCcccccCCeEEEEEeccc
Confidence 23 5799999999999999998875 221110 111112112211 1000 0110 00
Q ss_pred --HHHHHhhhccCc--cC-C------CCC-------cc-chhc---------ch-------hc--cccCCCCCCCCcc-C
Q 009427 297 --LLERYWDLMPEY--QG-V------TLD-------NL-EIQR---------VI-------YG--IFPTYRDSPLPAA-F 338 (535)
Q Consensus 297 --~~~~~~~~~P~~--~~-~------~~~-------~~-~~~r---------~~-------~g--~~P~~~~~pl~~~-~ 338 (535)
...+..+++|.. .+ . ..+ .. .+.+ .+ ++ .++.....+.+.+ .
T Consensus 267 ~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (584)
T 2gmh_A 267 DRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTF 346 (584)
T ss_dssp CTTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCCHHHHHHHHTTSTTTHHHHTTCEEEEEEEEEEECCGGGGCCCCEE
T ss_pred cCCcCCceEEEEecCCCCeEEEEEEEecCcccccCChHHHHHHHHhChHHHHHhCCCeEEEecceEccCCCcccCCcccc
Confidence 000001122211 10 0 000 00 0000 00 00 0111111122222 5
Q ss_pred CCeeEeecCCCcccccccccchHHHHHHHHHHHHHHHHHhCCC-CChhchhhhCCCCchhhhhHH
Q 009427 339 NRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDF-VDSYSLSLLNPYMPNLSASWL 402 (535)
Q Consensus 339 ~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~~al~~~~-~~~~~l~~l~~y~~~~~~~~~ 402 (535)
+|+++||||||.++|++|+|++.|++|+..||+.|.++++.+. ....+...+..|+......|.
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye~~r~~~~v 411 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWV 411 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHH
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHHHHHHHHHHhHH
Confidence 9999999999999999999999999999999999999986542 222210014556665554443
No 21
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.85 E-value=6.5e-21 Score=198.37 Aligned_cols=254 Identities=18% Similarity=0.084 Sum_probs=154.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCC-cccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~-~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
.+||+||| |++|+++|+.|+++|++|+||||....+. .....++...++.|.++|+. +.+. ..........+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~--~~~~---~~~~~~~~~~~~ 85 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGAL--DDVL---QGSHTPPTYETW 85 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCH--HHHH---TTCBCCSCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCH--HHHH---hhCCCccceEEE
Confidence 58999999 99999999999999999999999865432 22233566777777777862 2221 111111111111
Q ss_pred ccCccee-e---eccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChHH
Q 009427 188 GKGEIWV-E---DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 188 ~~~~~~~-~---~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~v 263 (535)
..+.... . ....+.+++..+.+.|.+.+.+.|++++.+++|++++. ++ .|++.+|++++||+||+|||.+|.+
T Consensus 86 ~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 86 MHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp ETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTTCHH
T ss_pred eCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCccHHH
Confidence 1111000 0 11134578899999999999999999999999999965 45 7788888889999999999999999
Q ss_pred HHHhCCCCCCCCCceeEEEEEe---cCC----CCC-CC-hHH---HH--HHHhhhccCccCC-------CC-----Cccc
Q 009427 264 VKQAFPAGSGPLDRTTYMFTYI---DPQ----AGS-PK-LEE---LL--ERYWDLMPEYQGV-------TL-----DNLE 317 (535)
Q Consensus 264 ~~~~~p~~~~~~~~~~~~~~y~---~~~----~~~-~~-l~~---~~--~~~~~~~P~~~~~-------~~-----~~~~ 317 (535)
+++..+. ..+ ....+ ..|. ... +.. +. ..+ .+ +++++++|...+. .. +.+.
T Consensus 163 r~~l~~~-~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 239 (379)
T 3alj_A 163 RDSIGFK-QDR-WVSKD-GLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADPRGSSVP 239 (379)
T ss_dssp HHHHCCC-EEE-EEEEE-EEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECTTCTTTTCSS
T ss_pred HHHhcCC-CCc-CcCCc-EEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecCCCCCHHHHH
Confidence 9886542 110 01111 1111 110 111 11 111 11 2234445543220 00 0000
Q ss_pred --hh------c---chhc--------cccCCCCCCCCcc-CCCeeEeecCCCcccccccccchHHHHHHHHHHHHHH
Q 009427 318 --IQ------R---VIYG--------IFPTYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 374 (535)
Q Consensus 318 --~~------r---~~~g--------~~P~~~~~pl~~~-~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~ 374 (535)
+. + .+.. .+|.+...+.+.+ .+|+++||||||.++|++|||+|.+++||..|++.|.
T Consensus 240 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~ 316 (379)
T 3alj_A 240 IDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLE 316 (379)
T ss_dssp CCHHHHHHHCGGGHHHHHHHHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCCchhccHHHHHhhCCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhc
Confidence 00 0 0000 0011110112223 4899999999999999999999999999999999875
No 22
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.83 E-value=4.5e-20 Score=193.40 Aligned_cols=151 Identities=17% Similarity=0.215 Sum_probs=101.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCC-c--ccccccH-HHHHHHHHcCCCChHhHHHHHhhhcCCCcc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGR-E--QEWNISR-KELLELVESGILVEDDIDEATATKFNPNRC 184 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~-~--~~~~is~-~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~ 184 (535)
++||+||| |++|+++|+.|++.|++|+||||...... . ..+.+.. ...+.|.++|++ +.+..... ....
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~--~~~~~~~~---~~~~- 99 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLL--QTYYDLAL---PMGV- 99 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCH--HHHHHHCB---CCCE-
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChH--HHHHHhhc---ccce-
Confidence 58999999 99999999999999999999999853221 1 1122221 234555566873 22222110 0001
Q ss_pred cccc-cCcceee-------eccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEc
Q 009427 185 GFEG-KGEIWVE-------DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDA 256 (535)
Q Consensus 185 ~~~~-~~~~~~~-------~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~A 256 (535)
.+.. .+..... ......+++..|.+.|.+++.+ ++++.+++|++++.++++++|++.+|++++||+||+|
T Consensus 100 ~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~A 177 (398)
T 2xdo_A 100 NIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILA 177 (398)
T ss_dssp EEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEEC
T ss_pred EEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEEC
Confidence 1110 1111000 0112347888898888887643 6788999999998888889999988888999999999
Q ss_pred cCCChHHHHHhC
Q 009427 257 MGNFSPVVKQAF 268 (535)
Q Consensus 257 dG~~S~v~~~~~ 268 (535)
||.+|.++++..
T Consensus 178 dG~~S~vR~~l~ 189 (398)
T 2xdo_A 178 NGGMSKVRKFVT 189 (398)
T ss_dssp SCTTCSCCTTTC
T ss_pred CCcchhHHhhcc
Confidence 999999988753
No 23
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.79 E-value=5.8e-19 Score=191.02 Aligned_cols=175 Identities=10% Similarity=0.067 Sum_probs=106.8
Q ss_pred ccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe--EEEEEcCCeEEEcCeEEEccCCChHHHHHhCCCCC-C--
Q 009427 199 NLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAEGKILSSHLIIDAMGNFSPVVKQAFPAGS-G-- 273 (535)
Q Consensus 199 ~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g--v~v~~~~G~~i~a~lVV~AdG~~S~v~~~~~p~~~-~-- 273 (535)
.+.+++..+.+.|.+.+.+.|++++.+ +|+++..++++ +.|.+.+|++++||+||+|||.+|.++++.+.... .
T Consensus 167 ~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~ 245 (511)
T 2weu_A 167 AYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQSFS 245 (511)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEEECT
T ss_pred eEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCcccc
Confidence 355899999999999999999999999 99999876665 55777778789999999999999988665433210 0
Q ss_pred CCCce--eEEEEEecCCC--CCCC-hHH-HHHHHhhhccCccCCC---------CCccchh---cchhccccCCCC----
Q 009427 274 PLDRT--TYMFTYIDPQA--GSPK-LEE-LLERYWDLMPEYQGVT---------LDNLEIQ---RVIYGIFPTYRD---- 331 (535)
Q Consensus 274 ~~~~~--~~~~~y~~~~~--~~~~-l~~-~~~~~~~~~P~~~~~~---------~~~~~~~---r~~~g~~P~~~~---- 331 (535)
+.... .+.+......+ ..+. ... .-.+++|++|...+.. .+..... +..++..|....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 325 (511)
T 2weu_A 246 DVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFKRDGNGYVYSDEFISPEEAERELRSTVAPGRDDLEANHI 325 (511)
T ss_dssp TTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSSEEEEEEEECTTTSCHHHHHHHHHHHHCTTCTTSCCEEE
T ss_pred ccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCCceEEEEEECCCCCCHHHHHHHHHHHhCcccccccceeE
Confidence 00111 11111111111 1110 000 1134566666533110 0000000 001121111000
Q ss_pred ----CCCCcc-CCCeeEeecCCCcccccccccchHHHHHHHHHHHHHH
Q 009427 332 ----SPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 374 (535)
Q Consensus 332 ----~pl~~~-~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~ 374 (535)
...+.+ .+|+++||||||.++|++|+|++.+++++..|++.|.
T Consensus 326 ~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~ 373 (511)
T 2weu_A 326 QMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFP 373 (511)
T ss_dssp ECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCC
T ss_pred EeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhc
Confidence 011222 4999999999999999999999999999999888764
No 24
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.78 E-value=2.9e-19 Score=194.31 Aligned_cols=263 Identities=14% Similarity=0.146 Sum_probs=148.2
Q ss_pred cccEEEEc-chHHHHHHHHHHH------------CCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHh
Q 009427 110 TFDVIVCG-GTLGIFIATALSF------------KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATA 176 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr------------~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~ 176 (535)
.+|||||| |++|+++|+.|++ .|++|+|||+...+.......+.+...+.|..+|+.+.+.+...-.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~g~~~~p~~~~~l~~lGi~e~~~~~~~~~ 86 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGVGEGTWPSMRSTLSKIGIDENDFIRQCDA 86 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCSCEECCTHHHHHHHHHTCCHHHHHHHTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcceeeechHhHHHHHHHcCCCHHHHHHHcCC
Confidence 58999999 9999999999999 9999999999765432211123344455555568742211222110
Q ss_pred h--------hcCC------C-c--cccc-----------c------cC--------------------------cceeee
Q 009427 177 T--------KFNP------N-R--CGFE-----------G------KG--------------------------EIWVED 196 (535)
Q Consensus 177 ~--------~~~~------~-~--~~~~-----------~------~~--------------------------~~~~~~ 196 (535)
. .|.. + . ..+. . .. ......
T Consensus 87 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~~~ 166 (526)
T 2pyx_A 87 SFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHFQN 166 (526)
T ss_dssp EEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCCSS
T ss_pred EEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCCCC
Confidence 0 1110 0 0 0000 0 00 000000
Q ss_pred ccccccCHHHHHHHHHHHHHh-CCCEEEeCceEEEEEEeCCeE--EEEEcCCeEEEcCeEEEccCCChHHHHHhCCCCC-
Q 009427 197 ILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA--VLLLAEGKILSSHLIIDAMGNFSPVVKQAFPAGS- 272 (535)
Q Consensus 197 ~~~~~v~~~~l~~~L~~~a~~-~G~~i~~~~~V~~i~~~~~gv--~v~~~~G~~i~a~lVV~AdG~~S~v~~~~~p~~~- 272 (535)
...+.+++..+.+.|.+.+.+ .|++++.+ +|+++..+++++ .|.+++|.+++||+||+|||.+|.++++.++...
T Consensus 167 ~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~~ 245 (526)
T 2pyx_A 167 NYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPFL 245 (526)
T ss_dssp CCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCCEE
T ss_pred CeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCcc
Confidence 113458999999999999998 89999999 699998765553 4666677779999999999999988554333210
Q ss_pred C-C---CCceeEEEEEecCC---CCCCC-hHH-HHHHHhhhccCccCC---------CCCccchh----cchh--c----
Q 009427 273 G-P---LDRTTYMFTYIDPQ---AGSPK-LEE-LLERYWDLMPEYQGV---------TLDNLEIQ----RVIY--G---- 324 (535)
Q Consensus 273 ~-~---~~~~~~~~~y~~~~---~~~~~-l~~-~~~~~~~~~P~~~~~---------~~~~~~~~----r~~~--g---- 324 (535)
. + .....+........ +..+. ... .-.+++|.+|...+. ..++.... +.+. +
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~~~~l~ 325 (526)
T 2pyx_A 246 SQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRKGVGYVYSSSHTNDIDAQKTLFNYLGVDGAAAD 325 (526)
T ss_dssp ECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEEEEEEEECTTTCCHHHHHHHHHHHHTCCHHHHH
T ss_pred cccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCceEEEEEecCCCCChHHHHHHHHHHHHhcCcccc
Confidence 0 0 00011111111110 00110 000 012345555543210 00000000 0000 0
Q ss_pred -----cccCCCCCCCCc-cCCCeeEeecCCCcccccccccchHHHHHHHHHHHHHH
Q 009427 325 -----IFPTYRDSPLPA-AFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 374 (535)
Q Consensus 325 -----~~P~~~~~pl~~-~~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~ 374 (535)
.++.... ..+. +.+|+++||||||.++|++|+|++.+++|+..|++.|.
T Consensus 326 ~~~~~~~~~~~~-~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~ 380 (526)
T 2pyx_A 326 KLEPRQLAINPG-YRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLP 380 (526)
T ss_dssp HCCCEEEECCCE-EESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCC
T ss_pred cCCceEEecccC-ccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhh
Confidence 0111100 1122 24999999999999999999999999999998888664
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.78 E-value=1.1e-18 Score=190.20 Aligned_cols=264 Identities=14% Similarity=0.089 Sum_probs=147.2
Q ss_pred cccEEEEc-chHHHHHHHHHHH---CCCcEEEEcccCCCCCcccccccHHHHH-HHHHcCCCChHhHHHHHh--h-----
Q 009427 110 TFDVIVCG-GTLGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELL-ELVESGILVEDDIDEATA--T----- 177 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr---~G~~V~liEr~~~~~~~~~~~is~~~l~-~L~~lGl~~~~~~~~~~~--~----- 177 (535)
.+|||||| |++|+++|+.|++ .|++|+|||+...+.......+...... .+..+|+...+.+..... .
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~~~ 84 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAIKF 84 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCccc
Confidence 58999999 9999999999999 9999999999765432211122233333 344447632111111100 0
Q ss_pred -hcCC------CcccccccCc-----------------------ce-----------------------eeeccccccCH
Q 009427 178 -KFNP------NRCGFEGKGE-----------------------IW-----------------------VEDILNLGVSP 204 (535)
Q Consensus 178 -~~~~------~~~~~~~~~~-----------------------~~-----------------------~~~~~~~~v~~ 204 (535)
.|.. ....+...+. .+ ......+.+++
T Consensus 85 ~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~ 164 (538)
T 2aqj_A 85 VNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAWHFDA 164 (538)
T ss_dssp ESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEEEECH
T ss_pred cCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccEEEeH
Confidence 0100 0000000000 00 00111345889
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe--EEEEEcCCeEEEcCeEEEccCCChHHHHHhCCCCC----CCC-Cc
Q 009427 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAEGKILSSHLIIDAMGNFSPVVKQAFPAGS----GPL-DR 277 (535)
Q Consensus 205 ~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g--v~v~~~~G~~i~a~lVV~AdG~~S~v~~~~~p~~~----~~~-~~ 277 (535)
..+.+.|.+.+.+.|++++.+ +|+++..++++ +.|.+++|++++||+||+|||.+|.++++.++... ... ..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~~~~~ 243 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMSDYLLCD 243 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECTTTCCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCccccccccccc
Confidence 999999999999999999999 89999876554 45677778789999999999999988665443210 000 00
Q ss_pred eeEEEEEecCCC---CCCC-hH-HHHHHHhhhccCccCC---------CCCccchhc---chhc--------cccCCCCC
Q 009427 278 TTYMFTYIDPQA---GSPK-LE-ELLERYWDLMPEYQGV---------TLDNLEIQR---VIYG--------IFPTYRDS 332 (535)
Q Consensus 278 ~~~~~~y~~~~~---~~~~-l~-~~~~~~~~~~P~~~~~---------~~~~~~~~r---~~~g--------~~P~~~~~ 332 (535)
..+........+ ..+. .. ..-.+++|++|...+. ..+.-...+ ..++ .++.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~g~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 323 (538)
T 2aqj_A 244 SAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGRFGSGYVFSSHFTSRDQATADFLKLWGLSDNQPLNQIKFRVGR 323 (538)
T ss_dssp EEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTEEEEEEEECTTTSCHHHHHHHHHHHHTCCTTCCCEEEECCCEE
T ss_pred eEEEEecccCCcccCCCCceeeeecCCceEEEecCCCceEEEEEEcCCCCChHHHHHHHHHHhcCCCCCCceEEeecccc
Confidence 111111110000 0010 00 0012345555543211 000000000 0011 01111100
Q ss_pred CCCccCCCeeEeecCCCcccccccccchHHHHHHHHHHHHHH
Q 009427 333 PLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 374 (535)
Q Consensus 333 pl~~~~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~ 374 (535)
..+.+.+|+++||||||.++|++|+|++.+++|+..|++.|.
T Consensus 324 ~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~ 365 (538)
T 2aqj_A 324 NKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFP 365 (538)
T ss_dssp ESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCC
T ss_pred ccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhh
Confidence 011235999999999999999999999999999998887653
No 26
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.77 E-value=1.9e-18 Score=188.88 Aligned_cols=173 Identities=13% Similarity=0.068 Sum_probs=102.7
Q ss_pred cccCHHHHHHHHHHHHHhC-CCEEEeCceEEEEEEeCCe--EEEEEcCCeEEEcCeEEEccCCChHHHHHhCCCCC----
Q 009427 200 LGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENA--AVLLLAEGKILSSHLIIDAMGNFSPVVKQAFPAGS---- 272 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~-G~~i~~~~~V~~i~~~~~g--v~v~~~~G~~i~a~lVV~AdG~~S~v~~~~~p~~~---- 272 (535)
+.+++..+.+.|.+.+.+. |++++.+ +|+++..++++ +.|.+.+|++++||+||+|||.+|.++++.+....
T Consensus 189 ~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~~~~~~ 267 (550)
T 2e4g_A 189 WHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEPFLDMS 267 (550)
T ss_dssp EEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCCEEECT
T ss_pred eEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCCccccc
Confidence 4488999999999999998 9999999 99999876655 55777788889999999999999988555433210
Q ss_pred --CCCCceeEEEEEecCCC---CCCC-hHH-HHHHHhhhccCccCC---------CCCccchh---cchhccccCCC---
Q 009427 273 --GPLDRTTYMFTYIDPQA---GSPK-LEE-LLERYWDLMPEYQGV---------TLDNLEIQ---RVIYGIFPTYR--- 330 (535)
Q Consensus 273 --~~~~~~~~~~~y~~~~~---~~~~-l~~-~~~~~~~~~P~~~~~---------~~~~~~~~---r~~~g~~P~~~--- 330 (535)
-+.+ ..+.+......+ ..+. ... .-.+++|++|..... ..+.-... +..++..|...
T Consensus 268 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~~~~g~v~~~~~~~~~~~~~~l~~~~~~~p~l~~~~ 346 (550)
T 2e4g_A 268 DHLLND-SAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGRFGTGYVYSSRFATEDEAVREFCEMWHLDPETQPLN 346 (550)
T ss_dssp TTCCCC-EEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSEEEEEEEECTTTSCHHHHHHHHHHHTTCCTTTSCCE
T ss_pred cccccc-ceEEEeecccCCcccCCCceeeeecCCceEEEccCCCccceEEEEecCCCChHHHHHHHHHhhCcCcccCCCc
Confidence 0001 111111100000 0010 000 012344555532210 00000000 00111111100
Q ss_pred -----CCCCC-ccCCCeeEeecCCCcccccccccchHHHHHHHHHHHHHH
Q 009427 331 -----DSPLP-AAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 374 (535)
Q Consensus 331 -----~~pl~-~~~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~ 374 (535)
....+ .+.+|+++||||||.++|++|||++.+++++..|++.|.
T Consensus 347 ~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~ 396 (550)
T 2e4g_A 347 RIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFP 396 (550)
T ss_dssp EEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCC
T ss_pred eEEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhcc
Confidence 00112 234999999999999999999999999999999987653
No 27
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.70 E-value=2e-18 Score=179.85 Aligned_cols=247 Identities=12% Similarity=0.062 Sum_probs=128.7
Q ss_pred cEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCCCCc-ccccccHHHHHHHHHcCCCChHhHHHHHhhhcCC-Ccccc
Q 009427 112 DVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLKGRE-QEWNISRKELLELVESGILVEDDIDEATATKFNP-NRCGF 186 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~~~~-~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~-~~~~~ 186 (535)
||+||| ||+|+++|+.|+++ |++|+|+||.+..... ....++...++.+...++.. +..+...+.+ ....+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 77 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYL----DAPERLNPQFLEDFKL 77 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGS----SCGGGGCCEEECCEEE
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhh----hhhHHHhhccccceEE
Confidence 899999 99999999999999 9999999998543110 00011111111110001100 0001111100 01111
Q ss_pred cccCcceee--eccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChHHH
Q 009427 187 EGKGEIWVE--DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVV 264 (535)
Q Consensus 187 ~~~~~~~~~--~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~v~ 264 (535)
...+..... ....+.+++..|.+.|.+.+.+.|++++.+++|++++.. .+++||+||+|||.+|. +
T Consensus 78 ~~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S~-R 145 (381)
T 3c4a_A 78 VHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNHK-T 145 (381)
T ss_dssp EESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGGG-T
T ss_pred EeCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCch-H
Confidence 111110000 111235788999999999999999999999999887421 12579999999999998 7
Q ss_pred HHhCCCCCCCCC-ceeEEEEEecCCCCCCChHHHH----HHHhh--hccCccCC---------------CCCcc---chh
Q 009427 265 KQAFPAGSGPLD-RTTYMFTYIDPQAGSPKLEELL----ERYWD--LMPEYQGV---------------TLDNL---EIQ 319 (535)
Q Consensus 265 ~~~~p~~~~~~~-~~~~~~~y~~~~~~~~~l~~~~----~~~~~--~~P~~~~~---------------~~~~~---~~~ 319 (535)
++..+. .++.. .......|.......+.....+ .++++ .+|...+. ..+.. ...
T Consensus 146 ~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (381)
T 3c4a_A 146 AHFTEA-LVPQVDYGRNKYIWYGTSQLFDQMNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASA 224 (381)
T ss_dssp CCSSGG-GCCCCEEEEEEEEEEEESSCCSSEEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHH
T ss_pred Hhhhhh-cCCCcccCCccEEEEecCCCCCcceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCcccCChHHHH
Confidence 654211 01110 1111122222111101000000 11111 12221110 00000 000
Q ss_pred c---chh-c------cc-------cCCCCCCCCcc-CCCeeEeecCCCcccccccccchHHHHHHHHHHHHHHH
Q 009427 320 R---VIY-G------IF-------PTYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYE 375 (535)
Q Consensus 320 r---~~~-g------~~-------P~~~~~pl~~~-~~rvlliGDAA~~~~P~~G~Gi~~al~da~~La~~l~~ 375 (535)
+ ..+ + ++ +.....+.+.+ .+|++++|||||.++|++|||+|.|++||..|+++|.+
T Consensus 225 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~ 298 (381)
T 3c4a_A 225 EYVAKVFQAELGGHGLVSQPGLGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCT 298 (381)
T ss_dssp HHHHHHTHHHHTTCCCBCCTTTCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCchhhcCCCcceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhc
Confidence 0 000 0 01 00000112222 48999999999999999999999999999999999876
No 28
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.60 E-value=3e-15 Score=161.47 Aligned_cols=134 Identities=20% Similarity=0.178 Sum_probs=97.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
.+||+||| |++|+++|+.|++.|++|+|||+....++....++....++.+..+|+. ... ..|..
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~------~~~-~~~~~------- 157 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAK------KFY-GRFCT------- 157 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHH------HHC-TTTTC-------
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCc------ccc-ccccc-------
Confidence 58999999 9999999999999999999999986544433344555566666555531 100 01110
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEe---CCeEEEEE--c-CC--eEEEcCeEEEccCCC
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY---ENAAVLLL--A-EG--KILSSHLIIDAMGNF 260 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~---~~gv~v~~--~-~G--~~i~a~lVV~AdG~~ 260 (535)
.. ...++...+.+.|.+.+.+.|++++.+++|+++..+ ++++.|++ . +| .+++||+||+|||.+
T Consensus 158 -~~-------~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 158 -GT-------LDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGK 229 (497)
T ss_dssp -TT-------CCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTT
T ss_pred -cc-------cccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCC
Confidence 00 012456778889999998899999999999999764 24566666 3 55 469999999999999
Q ss_pred hHHHH
Q 009427 261 SPVVK 265 (535)
Q Consensus 261 S~v~~ 265 (535)
|.++.
T Consensus 230 S~~r~ 234 (497)
T 2bry_A 230 FVPEG 234 (497)
T ss_dssp CCCTT
T ss_pred ccccc
Confidence 97764
No 29
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.57 E-value=7.9e-15 Score=155.28 Aligned_cols=138 Identities=13% Similarity=0.100 Sum_probs=80.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCC--cccc---cccHHHHHHHHHcCCCChHhHHHHHhh---hc-
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGR--EQEW---NISRKELLELVESGILVEDDIDEATAT---KF- 179 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~--~~~~---~is~~~l~~L~~lGl~~~~~~~~~~~~---~~- 179 (535)
.+||+||| ||+|+++|+.|+++|++|+||||...... .+.. ......+..+..+|+-........+.. .+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 101 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFGYFGHYYYVG 101 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHCEEEEEEEEC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcccccceeEEEC
Confidence 47999999 99999999999999999999999852111 1111 122334444444554111110000000 00
Q ss_pred CCCcccccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCc-eEEEEEEeCCeEEEEEcCCeEEEcCeEEEccC
Q 009427 180 NPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGY-SVSSICTYENAAVLLLAEGKILSSHLIIDAMG 258 (535)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~-~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG 258 (535)
.+..+.|. +. .......+++..+...|.+++.+.|++++... .+.++ +.....+++||+|||
T Consensus 102 ~~~~~~~~--~~---~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l------------~~~~~~ad~VV~AdG 164 (430)
T 3ihm_A 102 GPQPMRFY--GD---LKAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDL------------EGLSEQYDLLVVCTG 164 (430)
T ss_dssp SSSCEEEE--EE---EEEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGH------------HHHHTTSSEEEECCC
T ss_pred CCCccccc--hh---cCCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhh------------hhhcccCCEEEECCC
Confidence 11111111 00 01224568899999999999999999887632 01111 001126899999999
Q ss_pred CChHHH
Q 009427 259 NFSPVV 264 (535)
Q Consensus 259 ~~S~v~ 264 (535)
..|.++
T Consensus 165 ~~S~~~ 170 (430)
T 3ihm_A 165 KYALGK 170 (430)
T ss_dssp CTTGGG
T ss_pred CcchHH
Confidence 998764
No 30
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.46 E-value=8.2e-13 Score=136.65 Aligned_cols=66 Identities=24% Similarity=0.215 Sum_probs=56.6
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChH-HHHH
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP-VVKQ 266 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~-v~~~ 266 (535)
..+++..+.+.|.+.+.+.|++++.+++|+++..+++++.|.+.+| +++||.||+|+|.+|. +...
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~ 225 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQ 225 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHH
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHh
Confidence 4578899999999999999999999999999987777777777666 8999999999999987 4443
No 31
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.43 E-value=3.4e-12 Score=129.48 Aligned_cols=139 Identities=17% Similarity=0.182 Sum_probs=81.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCc-cc--------------cc-ccHHHHHHHHHcCCCChHhHH
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGRE-QE--------------WN-ISRKELLELVESGILVEDDID 172 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~-~~--------------~~-is~~~l~~L~~lGl~~~~~~~ 172 (535)
++||+||| |++|+++|+.|+++|++|+||||....++. .. +. ......+.+..+. .
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 74 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQ-------A 74 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHH-------H
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHH-------h
Confidence 37999999 999999999999999999999998533211 00 00 0111111110000 0
Q ss_pred HHHhhhcCCCccccc-----c--cC-cceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcC
Q 009427 173 EATATKFNPNRCGFE-----G--KG-EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE 244 (535)
Q Consensus 173 ~~~~~~~~~~~~~~~-----~--~~-~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~ 244 (535)
......+......+. . .. ..+.. . ... +.+.+.+.+ |++++.+++|++++.++++++|++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~----~~l~~~l~~-g~~i~~~~~v~~i~~~~~~~~v~~~~ 144 (336)
T 1yvv_A 75 QGHVAEWTPLLYNFHAGRLSPSPDEQVRWVG-K----PGM----SAITRAMRG-DMPVSFSCRITEVFRGEEHWNLLDAE 144 (336)
T ss_dssp HTSEEEECCCEEEESSSBCCCCCTTSCEEEE-S----SCT----HHHHHHHHT-TCCEECSCCEEEEEECSSCEEEEETT
T ss_pred CCCeeeccccceeccCcccccCCCCCccEEc-C----ccH----HHHHHHHHc-cCcEEecCEEEEEEEeCCEEEEEeCC
Confidence 000011111100000 0 00 01110 0 011 223333333 88999999999999888899999888
Q ss_pred CeEE-EcCeEEEccCCChHHHH
Q 009427 245 GKIL-SSHLIIDAMGNFSPVVK 265 (535)
Q Consensus 245 G~~i-~a~lVV~AdG~~S~v~~ 265 (535)
|+.+ +||+||+|+|..|..+.
T Consensus 145 g~~~~~a~~vV~a~g~~~~~~~ 166 (336)
T 1yvv_A 145 GQNHGPFSHVIIATPAPQASTL 166 (336)
T ss_dssp SCEEEEESEEEECSCHHHHGGG
T ss_pred CcCccccCEEEEcCCHHHHHHh
Confidence 8765 49999999998876653
No 32
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.40 E-value=5.5e-12 Score=133.24 Aligned_cols=64 Identities=14% Similarity=0.091 Sum_probs=58.0
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCc---eEEEEEEeCCeEE-EEEcCCeEEEcCeEEEccCCChHH
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGY---SVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~---~V~~i~~~~~gv~-v~~~~G~~i~a~lVV~AdG~~S~v 263 (535)
..+++..+.+.|.+.+++.|+++++++ +|++|..++++++ |.+.+|++++||.||+|+|.+|.-
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~ 223 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQ 223 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhh
Confidence 457889999999999999999999999 9999998888888 888888889999999999999863
No 33
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.38 E-value=6.8e-12 Score=128.46 Aligned_cols=67 Identities=16% Similarity=0.060 Sum_probs=58.0
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe-EEEEEcCC--eEEEcCeEEEccCCChHHHHH
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEG--KILSSHLIIDAMGNFSPVVKQ 266 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g-v~v~~~~G--~~i~a~lVV~AdG~~S~v~~~ 266 (535)
..+++..+.+.|.+.+++.|++++++++|+++..++++ +.|.+.+| .+++||.||+|+|.+|.....
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~ 214 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLAR 214 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHH
Confidence 34789999999999999999999999999999887766 77888777 589999999999999965443
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.36 E-value=7e-12 Score=129.69 Aligned_cols=66 Identities=12% Similarity=0.221 Sum_probs=56.9
Q ss_pred ccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE-EEEcCCeEEEcCeEEEccCCChHHHH
Q 009427 199 NLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSPVVK 265 (535)
Q Consensus 199 ~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~-v~~~~G~~i~a~lVV~AdG~~S~v~~ 265 (535)
...+++..+.+.|.+.+.+.|++++++++|++++.++++++ |.+.+| +++||.||+|+|.+|....
T Consensus 143 ~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~ 209 (382)
T 1y56_B 143 DGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLIN 209 (382)
T ss_dssp CCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHH
T ss_pred CeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHH
Confidence 34578999999999999999999999999999988777777 777666 7999999999999985443
No 35
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.35 E-value=2.3e-11 Score=126.65 Aligned_cols=63 Identities=10% Similarity=0.115 Sum_probs=54.7
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChHH
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~v 263 (535)
..+++..+.+.|.+.+.+.|++++++++|++++.++++++|.+.+| +++|+.||+|+|.++.-
T Consensus 148 g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~ 210 (397)
T 2oln_A 148 GTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTND 210 (397)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHH
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHH
Confidence 3467889999999999999999999999999998888888877554 79999999999999653
No 36
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.33 E-value=5.9e-12 Score=129.75 Aligned_cols=66 Identities=11% Similarity=0.121 Sum_probs=58.3
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChHHHHH
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQ 266 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~v~~~ 266 (535)
..+++..+.+.|.+.+++.|++++++++|+++..+++++.|++.+| +++||.||.|+|.+|.....
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~ 214 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAG 214 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHH
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHH
Confidence 4578999999999999999999999999999998888888888666 89999999999999865443
No 37
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.30 E-value=1.5e-11 Score=126.69 Aligned_cols=64 Identities=13% Similarity=0.049 Sum_probs=55.6
Q ss_pred ccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChHH
Q 009427 199 NLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 199 ~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~v 263 (535)
...+++..+.+.|.+.+.+.|++++++++|++++.+++++.|++.+| +++||.||+|+|.+|.-
T Consensus 143 ~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~ 206 (372)
T 2uzz_A 143 SGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVKD 206 (372)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGGG
T ss_pred CcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHHh
Confidence 34578899999999999999999999999999988777788887666 59999999999998853
No 38
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.30 E-value=2.8e-11 Score=135.61 Aligned_cols=65 Identities=12% Similarity=0.042 Sum_probs=57.1
Q ss_pred ccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCe-EEEcCeEEEccCCChHH
Q 009427 199 NLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK-ILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 199 ~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~-~i~a~lVV~AdG~~S~v 263 (535)
...+++..+.+.|.+.+.+.|++++++++|+++..+++++.|.+.+|. +++|+.||+|+|.+|..
T Consensus 406 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~ 471 (689)
T 3pvc_A 406 GGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPE 471 (689)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTC
T ss_pred CeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhc
Confidence 345789999999999999999999999999999988888888887776 79999999999998753
No 39
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.30 E-value=3.6e-11 Score=126.64 Aligned_cols=141 Identities=17% Similarity=0.199 Sum_probs=90.2
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcc------cccc-----cH--------HHHH-HHHHcCCCC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQ------EWNI-----SR--------KELL-ELVESGILV 167 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~------~~~i-----s~--------~~l~-~L~~lGl~~ 167 (535)
.++|||||| |++|+++|+.|+++|++|+|||+....+... ..++ .. ..+. .+.. ++
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~---~~ 102 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALAR---YR 102 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHH---SC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHh---cC
Confidence 368999999 9999999999999999999999986432110 0000 00 0000 0000 01
Q ss_pred hHhHHHHHhhhcCCCcccccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeE
Q 009427 168 EDDIDEATATKFNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKI 247 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~ 247 (535)
..++..... ... +.+......... ...+...+.+.|.+.+.+.|++++.+++|+++..+++++.|.+.+| +
T Consensus 103 ~~~~~~~~~-~~G---i~~~~~~~g~~~----~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~ 173 (417)
T 3v76_A 103 PQDFVALVE-RHG---IGWHEKTLGQLF----CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-T 173 (417)
T ss_dssp HHHHHHHHH-HTT---CCEEECSTTEEE----ESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-E
T ss_pred HHHHHHHHH-HcC---CCcEEeeCCEEe----eCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-E
Confidence 111111110 000 111001111110 1245678889999999999999999999999998888888888777 8
Q ss_pred EEcCeEEEccCCCh
Q 009427 248 LSSHLIIDAMGNFS 261 (535)
Q Consensus 248 i~a~lVV~AdG~~S 261 (535)
++||.||+|+|.+|
T Consensus 174 i~ad~VIlAtG~~S 187 (417)
T 3v76_A 174 VDAASLVVASGGKS 187 (417)
T ss_dssp EEESEEEECCCCSS
T ss_pred EEeeEEEECCCCcc
Confidence 99999999999998
No 40
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.29 E-value=2.7e-11 Score=135.42 Aligned_cols=65 Identities=17% Similarity=0.158 Sum_probs=58.7
Q ss_pred ccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChHH
Q 009427 199 NLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 199 ~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~v 263 (535)
...+++..+.+.|.+.+.+.|++++++++|+++..+++++.|++.+|.+++||.||+|+|.+|..
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~ 475 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISR 475 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGC
T ss_pred CeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhc
Confidence 34578999999999999999999999999999999989988888787789999999999999863
No 41
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.26 E-value=6.7e-11 Score=122.39 Aligned_cols=64 Identities=13% Similarity=0.132 Sum_probs=55.5
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChHHH
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVV 264 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~v~ 264 (535)
..+++..+.+.|.+.+.+.|++++++++|++++.+++++.|++.+| +++||.||+|+|.++.-.
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l 208 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKL 208 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHH
T ss_pred cEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHH
Confidence 4467889999999999999999999999999988777788877555 799999999999998644
No 42
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.26 E-value=2.7e-11 Score=128.71 Aligned_cols=147 Identities=22% Similarity=0.297 Sum_probs=90.0
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcc------ccccc-HHHHHHHHH-cCCCChHhHHHHHhhhcC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQ------EWNIS-RKELLELVE-SGILVEDDIDEATATKFN 180 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~------~~~is-~~~l~~L~~-lGl~~~~~~~~~~~~~~~ 180 (535)
++|||||| |++|+++|+.|+++|.+|+||||....++.. ..++. ....+.+.+ .+. ....+...+ ..+.
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~ 103 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPG-NGRFLYSAF-SIFN 103 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTB-TGGGGHHHH-HHSC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhcc-ChHHHHHHH-HhcC
Confidence 58999999 9999999999999999999999986432110 00000 000111111 110 000000000 0111
Q ss_pred CC---------cccccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe-EEEEEcCCeEEEc
Q 009427 181 PN---------RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSS 250 (535)
Q Consensus 181 ~~---------~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g-v~v~~~~G~~i~a 250 (535)
.. .+.+.......... ...+...+.+.|.+++.+.|++++.+++|+++..++++ +.|.+.+|++++|
T Consensus 104 ~~~~~~~~~~~G~~~~~~~~g~~~p---~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~A 180 (447)
T 2i0z_A 104 NEDIITFFENLGVKLKEEDHGRMFP---VSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLET 180 (447)
T ss_dssp HHHHHHHHHHTTCCEEECGGGEEEE---TTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEEC
T ss_pred HHHHHHHHHhcCCceEEeeCCEEEC---CCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEEC
Confidence 00 00010000011101 01135788899999999999999999999999877776 6677777877999
Q ss_pred CeEEEccCCCh
Q 009427 251 HLIIDAMGNFS 261 (535)
Q Consensus 251 ~lVV~AdG~~S 261 (535)
|.||+|+|.+|
T Consensus 181 d~VVlAtGg~s 191 (447)
T 2i0z_A 181 NHVVIAVGGKS 191 (447)
T ss_dssp SCEEECCCCSS
T ss_pred CEEEECCCCCc
Confidence 99999999999
No 43
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.25 E-value=5.8e-11 Score=123.57 Aligned_cols=66 Identities=11% Similarity=0.037 Sum_probs=55.0
Q ss_pred ccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe-EEEEEcCCeEEEcCeEEEccCCChHHHH
Q 009427 199 NLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNFSPVVK 265 (535)
Q Consensus 199 ~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g-v~v~~~~G~~i~a~lVV~AdG~~S~v~~ 265 (535)
...+++..+.+.|.+.+.+.|++++.+++|+++..++++ +.|.+.+| +++||.||+|+|.+|....
T Consensus 168 ~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~ 234 (405)
T 2gag_B 168 AGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLA 234 (405)
T ss_dssp CBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHH
T ss_pred CccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHH
Confidence 345788999999999999999999999999999876665 44667666 7999999999999985433
No 44
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.23 E-value=2.3e-10 Score=123.37 Aligned_cols=67 Identities=15% Similarity=0.158 Sum_probs=56.3
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc---CCe--EEEcCeEEEccCCChHHHHH
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGK--ILSSHLIIDAMGNFSPVVKQ 266 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~---~G~--~i~a~lVV~AdG~~S~v~~~ 266 (535)
..+++.++...|.+.+.+.|++++.+++|+++..+++.+.|.+. +|+ +++||.||+|+|.+|.....
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~ 215 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFD 215 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHH
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHH
Confidence 34799999999999999999999999999999887765666663 464 79999999999999975443
No 45
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.22 E-value=8.8e-11 Score=127.46 Aligned_cols=60 Identities=22% Similarity=0.319 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE-EEEcCCeEEEcCeEEEccCCChH
Q 009427 203 SPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (535)
Q Consensus 203 ~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~-v~~~~G~~i~a~lVV~AdG~~S~ 262 (535)
+...+.+.|.+.+.+.|++++++++|+++..+++++. |.+.+|+++.||.||+|+|++|.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 4567888899999999999999999999987766654 77888888999999999999985
No 46
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.21 E-value=1.9e-10 Score=125.71 Aligned_cols=67 Identities=15% Similarity=0.254 Sum_probs=55.8
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE-EEEcC---C--eEEEcCeEEEccCCChHHHHH
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAE---G--KILSSHLIIDAMGNFSPVVKQ 266 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~-v~~~~---G--~~i~a~lVV~AdG~~S~v~~~ 266 (535)
..+++.++...|.+.+.+.|++++.+++|+++..+++++. |.+.+ | .+++|+.||.|+|.+|.-..+
T Consensus 165 g~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~ 237 (561)
T 3da1_A 165 YRTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLRE 237 (561)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHH
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHH
Confidence 3578999999999999999999999999999998877643 55543 3 479999999999999965544
No 47
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.16 E-value=6.4e-11 Score=124.05 Aligned_cols=65 Identities=15% Similarity=0.233 Sum_probs=49.8
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCceEE---------EEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh-HHHH
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVS---------SICTYENAAVLLLAEGKILSSHLIIDAMGNFS-PVVK 265 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~---------~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S-~v~~ 265 (535)
..+++..+.+.|.+.+.+.|++++++++|+ ++..+++++.|.+.+| +++||.||+|+|.+| .+++
T Consensus 167 g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~ 241 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVE 241 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHH
T ss_pred EEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHH
Confidence 457889999999999999999999999999 8876666666666555 799999999999998 4555
No 48
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.15 E-value=3.2e-10 Score=118.72 Aligned_cols=138 Identities=20% Similarity=0.234 Sum_probs=86.8
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCC-------ccc--ccc--cHH--------HHHH-HHHcCCCCh
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGR-------EQE--WNI--SRK--------ELLE-LVESGILVE 168 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~-------~~~--~~i--s~~--------~l~~-L~~lGl~~~ 168 (535)
++||+||| |++|+++|+.|+++|.+|+||||....+. .++ .+. ... .+.. +.. ++.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~---~~~ 80 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALAR---YTN 80 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHH---SCH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHh---CCH
Confidence 58999999 99999999999999999999999863221 000 000 000 0000 000 000
Q ss_pred HhHHHHHhhhcCCCccccc--ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEe----CCeEEEEE
Q 009427 169 DDIDEATATKFNPNRCGFE--GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY----ENAAVLLL 242 (535)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~----~~gv~v~~ 242 (535)
.++.... ..+. +.+. ..+..+ + .. +...+.+.|.+.+.+.|++++.+++|+++..+ ++++.|++
T Consensus 81 ~~~~~~~-~~~G---i~~~~~~~g~~~-p----~~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~ 150 (401)
T 2gqf_A 81 WDFISLV-AEQG---ITYHEKELGQLF-C----DE-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQV 150 (401)
T ss_dssp HHHHHHH-HHTT---CCEEECSTTEEE-E----TT-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEE
T ss_pred HHHHHHH-HhCC---CceEECcCCEEc-c----CC-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEE
Confidence 0000000 0000 0010 011111 0 11 56788899999999999999999999999876 56677877
Q ss_pred cCCeEEEcCeEEEccCCCh
Q 009427 243 AEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 243 ~~G~~i~a~lVV~AdG~~S 261 (535)
.+| +++||.||+|+|.+|
T Consensus 151 ~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 151 NST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp TTE-EEEESEEEECCCCSS
T ss_pred CCC-EEECCEEEECCCCcc
Confidence 655 799999999999988
No 49
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.15 E-value=3.2e-10 Score=124.09 Aligned_cols=155 Identities=14% Similarity=0.130 Sum_probs=90.6
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCccccc---c----c-----------H-HHHHHHHHcC--CC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWN---I----S-----------R-KELLELVESG--IL 166 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~---i----s-----------~-~~l~~L~~lG--l~ 166 (535)
.++|||||| |++|+++|+.|+++|.+|+||||....++...+. + + . ..++.+.+.+ ..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 469999999 9999999999999999999999986544321110 0 1 0 0111111111 11
Q ss_pred ChHhHHHHHh------hhcCCCcccccc----cCcce--eeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEe
Q 009427 167 VEDDIDEATA------TKFNPNRCGFEG----KGEIW--VEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY 234 (535)
Q Consensus 167 ~~~~~~~~~~------~~~~~~~~~~~~----~~~~~--~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~ 234 (535)
+.+.++.... ..+....+.|.. .+..+ ........++...+.+.|.+.+.+.|++++++++|+++..+
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~ 279 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN 279 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC
Confidence 1111111000 000000011100 00000 00000111346788899999999999999999999999877
Q ss_pred C-CeE---EEEEcCCe--EEEcCeEEEccCCChHH
Q 009427 235 E-NAA---VLLLAEGK--ILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 235 ~-~gv---~v~~~~G~--~i~a~lVV~AdG~~S~v 263 (535)
+ +.+ ++...+|+ +++|+.||+|+|.+|..
T Consensus 280 ~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 280 DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp TTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTC
T ss_pred CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccC
Confidence 6 543 33333665 68999999999999865
No 50
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.14 E-value=2.5e-10 Score=116.34 Aligned_cols=128 Identities=22% Similarity=0.361 Sum_probs=83.3
Q ss_pred cccEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCCCCccccc---------ccHHHHHHHHHcCCCChHhHHHHHhh
Q 009427 110 TFDVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLKGREQEWN---------ISRKELLELVESGILVEDDIDEATAT 177 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~~~~~~~~---------is~~~l~~L~~lGl~~~~~~~~~~~~ 177 (535)
++||+||| |++|+++|+.|+++ |++|+|||+....+.. .|. +.....+.+.++|+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg-~~~~g~~~~~~~~~~~~~~~L~~~Gv------------ 145 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGG-AWLGGQLFSAMVMRKPADVFLDEVGV------------ 145 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTT-TTCCBTTCCCEEEETTTHHHHHHHTC------------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCc-cccCCccchhhhcchHHHHHHHHcCC------------
Confidence 58999999 99999999999997 9999999998644321 121 01111111111122
Q ss_pred hcCCCcccccccCcceeeeccccccCHHHHHHHHHHHHHh-CCCEEEeCceEEEEEEeCC--------------------
Q 009427 178 KFNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYEN-------------------- 236 (535)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~G~~i~~~~~V~~i~~~~~-------------------- 236 (535)
.|. ..+..+ ...+...+.+.|.+++.+ .|++++.++.|+++..+++
T Consensus 146 ~~~-------~~G~~~------~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~r 212 (344)
T 3jsk_A 146 PYE-------DEGDYV------VVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVR 212 (344)
T ss_dssp CCE-------ECSSEE------EESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEE
T ss_pred ccc-------ccCCeE------EEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCce
Confidence 011 011111 112356777889999888 4899999999999987652
Q ss_pred --eEEEEE----c--------CCeEEEcCeEEEccCCChHH
Q 009427 237 --AAVLLL----A--------EGKILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 237 --gv~v~~----~--------~G~~i~a~lVV~AdG~~S~v 263 (535)
++++.. . +..+++|++||+|||+.|++
T Consensus 213 V~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v 253 (344)
T 3jsk_A 213 IAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPF 253 (344)
T ss_dssp EEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSS
T ss_pred EeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchh
Confidence 122221 1 22579999999999999874
No 51
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.13 E-value=4e-10 Score=112.27 Aligned_cols=129 Identities=19% Similarity=0.347 Sum_probs=83.8
Q ss_pred cccEEEEc-chHHHHHHHHHHHC-CCcEEEEcccCCCCCcccccc---------cHHHHHHHHHcCCCChHhHHHHHhhh
Q 009427 110 TFDVIVCG-GTLGIFIATALSFK-GLRVAIVERNTLKGREQEWNI---------SRKELLELVESGILVEDDIDEATATK 178 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~-G~~V~liEr~~~~~~~~~~~i---------s~~~l~~L~~lGl~~~~~~~~~~~~~ 178 (535)
++||+||| |++|+++|+.|+++ |.+|+||||....+.. .|.. .....+.+.++|+ .
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~-~~~~~~~~~~~~~~~~~~~~l~~~G~------------~ 105 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG-AWLGGQLFSAMIVRKPAHLFLDEIGV------------A 105 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT-TTCCSTTCCCEEEETTTHHHHHHHTC------------C
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc-eecCCcchHHHHcCcHHHHHHHHcCC------------C
Confidence 58999999 99999999999997 9999999998643321 1110 0000111111121 0
Q ss_pred cCCCcccccccCcceeeeccccccCHHHHHHHHHHHHHh-CCCEEEeCceEEEEEEeCCeEE-EEEc---------CC--
Q 009427 179 FNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAV-LLLA---------EG-- 245 (535)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~G~~i~~~~~V~~i~~~~~gv~-v~~~---------~G-- 245 (535)
|. ..+. +. ...+...+...|.+++.+ .|++++.+++|+++..+++.+. +.+. +|
T Consensus 106 ~~-------~~~~-~~-----~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~ 172 (284)
T 1rp0_A 106 YD-------EQDT-YV-----VVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSC 172 (284)
T ss_dssp CE-------ECSS-EE-----EESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSC
T ss_pred cc-------cCCC-EE-----EecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCcccc
Confidence 10 0010 10 112556777888888876 6999999999999988776542 3321 22
Q ss_pred ---eEEEcCeEEEccCCChHHH
Q 009427 246 ---KILSSHLIIDAMGNFSPVV 264 (535)
Q Consensus 246 ---~~i~a~lVV~AdG~~S~v~ 264 (535)
.+++||.||+|+|..|.++
T Consensus 173 g~~~~i~ad~VV~AtG~~s~~~ 194 (284)
T 1rp0_A 173 MDPNVMEAKIVVSSCGHDGPFG 194 (284)
T ss_dssp CCCEEEEEEEEEECCCSSSTTT
T ss_pred CceEEEECCEEEECCCCchHHH
Confidence 5799999999999887554
No 52
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.13 E-value=4.9e-10 Score=118.59 Aligned_cols=64 Identities=19% Similarity=0.186 Sum_probs=53.5
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEE---------------eCCeE-EEEEcCCeEE--EcCeEEEccCCCh
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICT---------------YENAA-VLLLAEGKIL--SSHLIIDAMGNFS 261 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~---------------~~~gv-~v~~~~G~~i--~a~lVV~AdG~~S 261 (535)
..+++..+.+.|.+.+.+.|++++++++|+++.. +++++ .|.+.+| ++ +||.||.|+|.+|
T Consensus 176 ~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred eEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 4478899999999999999999999999999987 44444 4666666 68 9999999999998
Q ss_pred HHH
Q 009427 262 PVV 264 (535)
Q Consensus 262 ~v~ 264 (535)
.-.
T Consensus 255 ~~l 257 (448)
T 3axb_A 255 NRL 257 (448)
T ss_dssp HHH
T ss_pred HHH
Confidence 733
No 53
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.12 E-value=6.3e-10 Score=127.14 Aligned_cols=68 Identities=16% Similarity=0.222 Sum_probs=57.5
Q ss_pred ccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeE-EEEEcCCeEEEcCeEEEccCCChHHHHHh
Q 009427 199 NLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSPVVKQA 267 (535)
Q Consensus 199 ~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv-~v~~~~G~~i~a~lVV~AdG~~S~v~~~~ 267 (535)
...+++..+.+.|.+.+.+.|++++++++|+++..+++++ .|.+.+| +++||.||.|+|.+|....+.
T Consensus 145 ~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~ 213 (830)
T 1pj5_A 145 DGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAM 213 (830)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHT
T ss_pred CceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHH
Confidence 3457899999999999999999999999999998877775 3666555 799999999999999765543
No 54
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.12 E-value=1.3e-09 Score=119.32 Aligned_cols=153 Identities=13% Similarity=0.147 Sum_probs=88.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCccccc---c----c-----------HH-HHHHHHHcC--CCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWN---I----S-----------RK-ELLELVESG--ILV 167 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~---i----s-----------~~-~l~~L~~lG--l~~ 167 (535)
++|||||| |++|+++|+.|+++|++|+||||....++...+. + + .. .+..+...| ..+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 68999999 9999999999999999999999986544321110 0 0 00 011111111 111
Q ss_pred hHhHHHHHh-----hhc-CCCccccc----ccCccee--eeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeC
Q 009427 168 EDDIDEATA-----TKF-NPNRCGFE----GKGEIWV--EDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE 235 (535)
Q Consensus 168 ~~~~~~~~~-----~~~-~~~~~~~~----~~~~~~~--~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~ 235 (535)
.+.++.... ..| ....+.|. ..+..+. ............+.+.|.+.+.+.|++++++++|+++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~ 285 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD 285 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECT
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC
Confidence 111110000 000 00001110 0000000 00001113356788999999999999999999999998766
Q ss_pred -CeE---EEEEcCCe--EEEcCeEEEccCCChH
Q 009427 236 -NAA---VLLLAEGK--ILSSHLIIDAMGNFSP 262 (535)
Q Consensus 236 -~gv---~v~~~~G~--~i~a~lVV~AdG~~S~ 262 (535)
+.+ ++...+|+ ++.|+.||+|+|.++.
T Consensus 286 ~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 286 KGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp TSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 433 33333565 6899999999999885
No 55
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.10 E-value=1.9e-09 Score=103.15 Aligned_cols=35 Identities=26% Similarity=0.425 Sum_probs=32.3
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLK 144 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~ 144 (535)
++||+||| ||+|+++|+.|+++|++|+|+||....
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 48999999 999999999999999999999998543
No 56
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.09 E-value=8.2e-10 Score=121.19 Aligned_cols=145 Identities=19% Similarity=0.234 Sum_probs=89.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC--CCCCccc---ccccH-HHHHHHHHcCCCChHhHHHHHhhhcCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT--LKGREQE---WNISR-KELLELVESGILVEDDIDEATATKFNPN 182 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~--~~~~~~~---~~is~-~~l~~L~~lGl~~~~~~~~~~~~~~~~~ 182 (535)
+||||||| |++|+++|+.|++.|.+|+|||+.. ++..... ..+.. ..++.+..+|-.-....+. ....|.
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~-~gi~f~-- 104 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQ-AGIQFR-- 104 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHH-HEEEEE--
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhh-cccchh--
Confidence 69999999 9999999999999999999999973 3221110 11111 2233333333210100110 000110
Q ss_pred cccccccCcceeeeccccccCHHHHHHHHHHHHHh-CCCEEEeCceEEEEEEeCCeE-EEEEcCCeEEEcCeEEEccCCC
Q 009427 183 RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~G~~i~~~~~V~~i~~~~~gv-~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
... ...+... ......+|+..+.+.+.+.+.+ .|++++ +++|+++..+++.+ .|.+.+|.+++|+.||+|||.+
T Consensus 105 ~l~-~~kgpav--~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 105 ILN-ASKGPAV--RATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp EES-TTSCGGG--CEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred hhh-cccCccc--ccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 000 0011100 0112347888888999998887 588885 67999998766655 4667778889999999999987
Q ss_pred h
Q 009427 261 S 261 (535)
Q Consensus 261 S 261 (535)
|
T Consensus 181 s 181 (651)
T 3ces_A 181 L 181 (651)
T ss_dssp T
T ss_pred c
Confidence 6
No 57
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.08 E-value=1.4e-09 Score=104.91 Aligned_cols=123 Identities=17% Similarity=0.113 Sum_probs=83.5
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
+|||+||| |++|+.+|+.|++.|.+|+|||+.....+. ..+.. .+-+....+.. .+.. .
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~-~~~~~---------~~~~~~~~~~~----~~~d------~ 62 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMM-PFLPP---------KPPFPPGSLLE----RAYD------P 62 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC-CSSCC---------CSCCCTTCHHH----HHCC------T
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCc-ccCcc---------ccccchhhHHh----hhcc------C
Confidence 58999999 999999999999999999999997311110 00000 00000000000 0000 0
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhC-CCEEEeCceEEEEEEeCCeE-EEEEcCCeEEEcCeEEEccCCChHHH
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSPVV 264 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-G~~i~~~~~V~~i~~~~~gv-~v~~~~G~~i~a~lVV~AdG~~S~v~ 264 (535)
. +.++..+.+.|.+.+.+. |++++ +++|+++..+++.+ .|.+.+|.+++||.||+|+|.+|..+
T Consensus 63 ~-----------g~~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 63 K-----------DERVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp T-----------CCCHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCE
T ss_pred C-----------CCCHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhc
Confidence 0 015677888899999887 88888 57999998877765 46677787899999999999987543
No 58
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.07 E-value=1.1e-09 Score=120.13 Aligned_cols=145 Identities=17% Similarity=0.185 Sum_probs=90.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC--CCCCccccc---cc-HHHHHHHHHcCCCChHhHHHHHhhhcCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT--LKGREQEWN---IS-RKELLELVESGILVEDDIDEATATKFNPN 182 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~--~~~~~~~~~---is-~~~l~~L~~lGl~~~~~~~~~~~~~~~~~ 182 (535)
+||||||| |++|+++|+.||+.|.+|+|||+.. ++....... +. .+.++.+..++-+.....+.. ...|.
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~-gi~f~-- 97 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDAT-GIQFR-- 97 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHH-EEEEE--
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhc-CCchh--
Confidence 69999999 9999999999999999999999973 332211111 11 122333322221111111110 00110
Q ss_pred cccccccCcceeeeccccccCHHHHHHHHHHHHHhC-CCEEEeCceEEEEEEeCCeEE-EEEcCCeEEEcCeEEEccCCC
Q 009427 183 RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-G~~i~~~~~V~~i~~~~~gv~-v~~~~G~~i~a~lVV~AdG~~ 260 (535)
.. ....+... ......+|+..+.+.+.+.+.+. |++++. .+|+++..+++.+. |.+.+|.+++|+.||+|||.+
T Consensus 98 ~l-~~~kgpav--~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 98 ML-NRSKGPAM--HSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp EE-CSSSCTTT--CEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred hc-ccccCccc--cchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 00 00011111 01123578888889998888874 888864 58999988877776 777788899999999999987
Q ss_pred h
Q 009427 261 S 261 (535)
Q Consensus 261 S 261 (535)
+
T Consensus 174 s 174 (641)
T 3cp8_A 174 L 174 (641)
T ss_dssp B
T ss_pred C
Confidence 4
No 59
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.07 E-value=1.3e-09 Score=100.55 Aligned_cols=170 Identities=16% Similarity=0.149 Sum_probs=115.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
|||+||| |++|+.+|..|++.|.+|+|+|+.+-.- .+.. .+ ..+ +. +
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~-~~~~-------------~~-----------~~~-~~---~--- 49 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKV-KGVS-------------RV-----------PNY-PG---L--- 49 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTT-TTCS-------------CC-----------CCS-TT---C---
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcc-cCch-------------hh-----------hcc-CC---C---
Confidence 7999999 9999999999999999999999974100 0000 00 000 00 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChHHHHHhCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQAFP 269 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~v~~~~~p 269 (535)
...+....+.+.+.+.+.+.|++++.+ +|++++.+++++.+++++| ++.+|.||.|+|..+.+++.. +
T Consensus 50 ---------~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~-g 117 (180)
T 2ywl_A 50 ---------LDEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLL-G 117 (180)
T ss_dssp ---------TTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHH-T
T ss_pred ---------cCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCccccC-C
Confidence 011345677788888898999999999 9999987777788888777 899999999999988664442 1
Q ss_pred CCCCCCCceeEEEEEecCCCCCCChHHHHHHHhhhccCccCCCCCccchhcchhccccCCCCCCCCccCCCeeEeecCCC
Q 009427 270 AGSGPLDRTTYMFTYIDPQAGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASG 349 (535)
Q Consensus 270 ~~~~~~~~~~~~~~y~~~~~~~~~l~~~~~~~~~~~P~~~~~~~~~~~~~r~~~g~~P~~~~~pl~~~~~rvlliGDAA~ 349 (535)
. + +. .. .+... ..+++..++++++||++.
T Consensus 118 ~-----~-----~~-~g--------------------------------------~i~vd--~~~~t~~~~i~a~GD~~~ 146 (180)
T 2ywl_A 118 L-----T-----RR-GA--------------------------------------YIDTD--EGGRTSYPRVYAAGVARG 146 (180)
T ss_dssp C-----C-----EE-TT--------------------------------------EECCC--TTCBCSSTTEEECGGGGT
T ss_pred C-----C-----cc-Cc--------------------------------------eEEeC--CCCCcCCCCEEEeecccC
Confidence 1 0 00 00 00000 011122468999999998
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHHhC
Q 009427 350 IQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 379 (535)
Q Consensus 350 ~~~P~~G~Gi~~al~da~~La~~l~~al~~ 379 (535)
...| -...|+.++..++..|...++.
T Consensus 147 ~~~~----~~~~A~~~g~~aa~~i~~~~~~ 172 (180)
T 2ywl_A 147 KVPG----HAIISAGDGAYVAVHLVSDLRG 172 (180)
T ss_dssp CCSC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchh----hHHHHHHhHHHHHHHHHHHhhh
Confidence 7554 2356788888888888776653
No 60
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.07 E-value=1.1e-09 Score=119.72 Aligned_cols=145 Identities=23% Similarity=0.211 Sum_probs=89.8
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC--CCCCccc---ccccH-HHHHHHHHcCCCChHhHHHHHhhhcCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT--LKGREQE---WNISR-KELLELVESGILVEDDIDEATATKFNPN 182 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~--~~~~~~~---~~is~-~~l~~L~~lGl~~~~~~~~~~~~~~~~~ 182 (535)
+||||||| |++|+++|+.|++.|.+|+|||+.. ++..... ..+.. ...+.+..+|-.-....+. ....|.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~-~gi~f~-- 103 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQ-TGIQFK-- 103 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHH-HEEEEE--
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhh-ccccee--
Confidence 59999999 9999999999999999999999973 3221110 11111 2223333333211111111 000110
Q ss_pred cccccccCcceeeeccccccCHHHHHHHHHHHHHh-CCCEEEeCceEEEEEEeCCeEE-EEEcCCeEEEcCeEEEccCCC
Q 009427 183 RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~G~~i~~~~~V~~i~~~~~gv~-v~~~~G~~i~a~lVV~AdG~~ 260 (535)
... ...+... ......+|+..+.+.+.+.+.+ .|++++ +++|+++..+++.+. |.+.+|.++.|+.||+|+|.+
T Consensus 104 ~l~-~~kGpav--~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 104 MLN-TRKGKAV--QSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp EES-TTSCGGG--CEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred ecc-cccCccc--cchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 000 0011100 1112346788888999998887 488885 679999987776653 677788889999999999987
Q ss_pred h
Q 009427 261 S 261 (535)
Q Consensus 261 S 261 (535)
+
T Consensus 180 s 180 (637)
T 2zxi_A 180 L 180 (637)
T ss_dssp B
T ss_pred c
Confidence 5
No 61
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.07 E-value=5.6e-10 Score=120.58 Aligned_cols=56 Identities=20% Similarity=0.233 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEEEeC-CeEE-EEEc-CCe--EEEcC-eEEEccCCCh
Q 009427 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAV-LLLA-EGK--ILSSH-LIIDAMGNFS 261 (535)
Q Consensus 206 ~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~-~gv~-v~~~-~G~--~i~a~-lVV~AdG~~S 261 (535)
.+.+.|.+.+++.|++++++++|+++..++ +.++ |.+. +++ +++|+ .||+|+|.++
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 788999999999999999999999998873 4332 3332 342 58995 9999999987
No 62
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.06 E-value=9.9e-10 Score=111.56 Aligned_cols=128 Identities=16% Similarity=0.223 Sum_probs=87.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCc-cccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNR-CGFE 187 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~-~~~~ 187 (535)
++||+||| |++|+++|+.|+++|++|+|||+....++ .|... .. ++ ..+.+.. ..+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg--~~~~~------~~--~~-----------~~~~~~~~~~~~ 61 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGG--AWQHA------WH--SL-----------HLFSPAGWSSIP 61 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSG--GGGGS------CT--TC-----------BCSSCGGGSCCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC--cccCC------CC--Cc-----------EecCchhhhhCC
Confidence 58999999 99999999999999999999999853332 12100 00 00 0000100 0000
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE-EEEcCCeEEEcCeEEEccCCChH
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~-v~~~~G~~i~a~lVV~AdG~~S~ 262 (535)
+... ........++..+.+.+.+.+.+.|++++.+++|+++..+++.+. |++.+| ++.+|.||+|+|.+|.
T Consensus 62 --~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 62 --GWPM-PASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp --SSCC-CCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred --CCCC-CCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 0000 000011134567788888888889999999999999998888888 888766 8999999999998763
No 63
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.05 E-value=1.5e-09 Score=108.67 Aligned_cols=111 Identities=18% Similarity=0.248 Sum_probs=83.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
|||+||| |++|+++|+.|++.|+ +|+|||+...++.. ... ... ..+ +.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~---~~~----------~~~----------~~~-~~------ 51 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQI---TGS----------SEI----------ENY-PG------ 51 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGG---GGC----------SCB----------CCS-TT------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCccc---ccc----------ccc----------ccC-CC------
Confidence 7999999 9999999999999999 99999997433210 000 000 000 00
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
+ ...+++..+.+.+.+.+.+.|++++. ++|+++..+++.+.+.+.+|+++++|.||+|+|..+
T Consensus 52 ----~-----~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 52 ----V-----KEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp ----C-----CSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEE
T ss_pred ----C-----cccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCC
Confidence 0 01245677778888888888999987 789999888887888777888899999999999765
No 64
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.04 E-value=1.2e-09 Score=109.46 Aligned_cols=110 Identities=17% Similarity=0.194 Sum_probs=76.0
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
+.|||+||| ||+|+++|+.|+|+|++|+|||++..++. + . ..+ ++..
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~------------------~-~---------~~~-~~~~--- 52 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNR------------------V-T---------QNS-HGFI--- 52 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGG------------------G-S---------SCB-CCST---
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCe------------------e-e---------eec-CCcc---
Confidence 379999999 99999999999999999999999753321 0 0 001 0000
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeC-CeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~-~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
. .-.+.+..+.+...+.+.+.+...+....++.+...+ +...+.+.+|+++++|.||+|+|+.
T Consensus 53 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 53 T----------RDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp T----------CTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCE
T ss_pred C----------CCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCc
Confidence 0 0123455666666777777766555556666665544 3467778888999999999999964
No 65
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.02 E-value=4.5e-09 Score=115.03 Aligned_cols=67 Identities=13% Similarity=0.143 Sum_probs=54.2
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE-EEEc---CC--eEEEcCeEEEccCCChHHHHH
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA---EG--KILSSHLIIDAMGNFSPVVKQ 266 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~-v~~~---~G--~~i~a~lVV~AdG~~S~v~~~ 266 (535)
..+++.++...+.+.+.+.|++++.+++|+++..+++.+. |.+. +| .+++|+.||.|+|.++.-...
T Consensus 183 g~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~ 255 (571)
T 2rgh_A 183 FRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRN 255 (571)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHT
T ss_pred CeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHH
Confidence 3478899999999999999999999999999988776542 4432 34 379999999999999865544
No 66
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.02 E-value=2.5e-09 Score=108.23 Aligned_cols=129 Identities=22% Similarity=0.361 Sum_probs=81.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCCCCccccc---------ccHHHHHHHHHcCCCChHhHHHHHhh
Q 009427 110 TFDVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLKGREQEWN---------ISRKELLELVESGILVEDDIDEATAT 177 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~~~~~~~~---------is~~~l~~L~~lGl~~~~~~~~~~~~ 177 (535)
++||+||| |++|+++|+.|+++ |++|+|+|+....+.. .|. +.....+.|.+.|+
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg-~~~~g~~~~~~~~~~~~~~~L~~~Gv------------ 131 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG-SWLGGQLFSAMVMRKPAHLFLQELEI------------ 131 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT-TTCCGGGCCCEEEETTTHHHHHHTTC------------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccc-ccccCcccchhhhhhHHHHHHHhhCc------------
Confidence 58999999 99999999999999 9999999998654421 121 00001111111121
Q ss_pred hcCCCcccccccCcceeeeccccccCHHHHHHHHHHHHHhC-CCEEEeCceEEEEEEeC--C----e---EEEEE----c
Q 009427 178 KFNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYE--N----A---AVLLL----A 243 (535)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-G~~i~~~~~V~~i~~~~--~----g---v~v~~----~ 243 (535)
.+. ..+..+ ...+...+.+.|.+++.+. |++++.+++|+++..++ + . +++.. .
T Consensus 132 ~~~-------~~g~~~------~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~ 198 (326)
T 2gjc_A 132 PYE-------DEGDYV------VVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQ 198 (326)
T ss_dssp CCE-------ECSSEE------EESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHT
T ss_pred ccc-------cCCCeE------EEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecc
Confidence 010 011111 1124567788899988885 89999999999998763 2 2 22221 1
Q ss_pred --------CCeEEEc---------------CeEEEccCCChHHH
Q 009427 244 --------EGKILSS---------------HLIIDAMGNFSPVV 264 (535)
Q Consensus 244 --------~G~~i~a---------------~lVV~AdG~~S~v~ 264 (535)
++.++.| ++||+|+|+.+++.
T Consensus 199 ~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~ 242 (326)
T 2gjc_A 199 AHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFG 242 (326)
T ss_dssp C---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CC
T ss_pred cccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHH
Confidence 2356899 99999999877553
No 67
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.02 E-value=1.8e-09 Score=110.62 Aligned_cols=116 Identities=18% Similarity=0.256 Sum_probs=84.3
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
++||+||| |++|+++|+.|++.|++|+|||+....++ . ... .+ |....+..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg--------~-~~~------------------~~-~~~~~~~~ 65 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGG--------Q-LAA------------------LY-PEKHIYDV 65 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH--------H-HHH------------------TC-TTSEECCS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC--------c-ccc------------------cC-CCcccccC
Confidence 58999999 99999999999999999999999743221 0 000 00 11000000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCC-eEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~-gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
.. + ..+++..+.+.+.+.+.+.+++++.+++|+++..+++ .+.|.+.+|.++.+|.||+|+|..|
T Consensus 66 ~~--~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 66 AG--F------PEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp TT--C------SSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred CC--C------CCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 00 0 0134567778888888888999999999999987655 6778887888899999999999865
No 68
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.01 E-value=2.1e-09 Score=108.79 Aligned_cols=116 Identities=18% Similarity=0.300 Sum_probs=84.2
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
.+||+||| |++|+++|+.|+++|++|+|||+....++ . +. ..+ |....+..
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg--------~----~~---------------~~~-~~~~~~~~ 56 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGG--------Q----LT---------------ALY-PEKYIYDV 56 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCH--------H----HH---------------HTC-TTSEECCS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC--------e----ee---------------ccC-CCceeecc
Confidence 58999999 99999999999999999999999743221 0 00 001 11000000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
.. + ..++...+.+.+.+.+.+.+++++.+++|+++..+++.+.|.+.+|.++.+|.||+|+|..+
T Consensus 57 ~~--~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 57 AG--F------PKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp TT--C------SSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSE
T ss_pred CC--C------CCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCC
Confidence 00 0 01345667778888888889999999999999887777888887787899999999999864
No 69
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.96 E-value=1.4e-08 Score=111.83 Aligned_cols=151 Identities=18% Similarity=0.230 Sum_probs=89.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccc---c----c------cHH-HHHHHHHc--CCCChHhHH
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEW---N----I------SRK-ELLELVES--GILVEDDID 172 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~---~----i------s~~-~l~~L~~l--Gl~~~~~~~ 172 (535)
++|||||| |++|+++|+.|+++|.+|+||||....+....+ . . +.. .+...... ++.+.+.++
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v~ 97 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIH 97 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 58999999 999999999999999999999998643322110 0 0 111 11221111 232332221
Q ss_pred HHH-------h--hhcCCCcccccc--cCcce-------eee--------ccccc--cCHHHHHHHHHHHHHhCCCEEEe
Q 009427 173 EAT-------A--TKFNPNRCGFEG--KGEIW-------VED--------ILNLG--VSPAKLIEIVKKRFISLGGVIFE 224 (535)
Q Consensus 173 ~~~-------~--~~~~~~~~~~~~--~~~~~-------~~~--------~~~~~--v~~~~l~~~L~~~a~~~G~~i~~ 224 (535)
... . ..+. +.|.. .+..+ ... +..+. .....++..|.+++.+.|+++++
T Consensus 98 ~l~~~s~~~i~~L~~~G---v~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~~ 174 (621)
T 2h88_A 98 YMTEQAPAAVIELENYG---MPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFV 174 (621)
T ss_dssp HHHHHHHHHHHHHHHTT---CCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEE
T ss_pred HHHHHHHHHHHHHHHcC---CCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 111 0 0110 11110 00000 000 00000 12357889999999889999999
Q ss_pred CceEEEEEEeCCeE---EEEE-cCCe--EEEcCeEEEccCCChHH
Q 009427 225 GYSVSSICTYENAA---VLLL-AEGK--ILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 225 ~~~V~~i~~~~~gv---~v~~-~~G~--~i~a~lVV~AdG~~S~v 263 (535)
++.|+++..+++.+ ++.. .+|+ .+.|+.||+|+|.++.+
T Consensus 175 ~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 175 EYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp TEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 99999998776643 2322 3564 68999999999999865
No 70
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.96 E-value=3.8e-09 Score=106.61 Aligned_cols=112 Identities=17% Similarity=0.217 Sum_probs=80.5
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
.+||+||| |++|+++|+.|++.|++|+|||+...++. +... +.+ ..+ +.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~---~~~~----------~~~----------~~~-~~------ 57 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQ---IAWS----------EEV----------ENF-PG------ 57 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGG---GGGC----------SCB----------CCS-TT------
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcc---cccc----------ccc----------ccC-CC------
Confidence 58999999 99999999999999999999999843221 0000 000 000 00
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEe--CCe-EEEEEcCCeEEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY--ENA-AVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~--~~g-v~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
+ ...++...+.+.+.+.+.+.|++++. ++|+++..+ ++. +.|.+.+|.++.+|.||+|+|..+
T Consensus 58 ----~-----~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 58 ----F-----PEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADP 123 (325)
T ss_dssp ----C-----SSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEE
T ss_pred ----C-----CCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 0 01234567778888888889999887 689998766 443 666666788899999999999754
No 71
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.95 E-value=4.3e-09 Score=105.35 Aligned_cols=110 Identities=16% Similarity=0.206 Sum_probs=81.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
++||+||| |++|+++|+.|+++|++|+|||+. .++. |.. .+ ..+. +
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~gg~---~~~----------~~------------~~~~-----~-- 61 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET-PGGQ---LTE----------AG------------IVDD-----Y-- 61 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-TTGG---GGG----------CC------------EECC-----S--
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc-CCCe---ecc----------cc------------cccc-----c--
Confidence 58999999 999999999999999999999998 3221 100 00 0000 0
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
.. . ..+....+.+.+.+.+.+.|++++. ++|+++..+++.+.+.+.+|.++.+|.||.|+|...
T Consensus 62 ~~------~--~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 62 LG------L--IEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp TT------S--TTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEE
T ss_pred CC------C--CCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCC
Confidence 00 0 0133566778888888888999888 899999887778888888878999999999999763
No 72
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.95 E-value=1.4e-08 Score=111.83 Aligned_cols=153 Identities=14% Similarity=0.170 Sum_probs=90.0
Q ss_pred cccEEEEc-chHHHHHHHHHHHCC--CcEEEEcccCCCCCcccc---c----c----cH-HHH-HHHHHc-CCCChHhHH
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKG--LRVAIVERNTLKGREQEW---N----I----SR-KEL-LELVES-GILVEDDID 172 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G--~~V~liEr~~~~~~~~~~---~----i----s~-~~l-~~L~~l-Gl~~~~~~~ 172 (535)
++|||||| |++|+++|+.|+++| .+|+||||....+....+ . . +. ..+ +.+... ++.+.+.++
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 84 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVD 84 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 58999999 999999999999999 999999998543221111 1 0 11 111 122111 222222221
Q ss_pred HHH-------h--hhcCCCcccccc--cCcc-------eeeeccccc--cCHHHHHHHHHHHHHhCC-CEEEeCceEEEE
Q 009427 173 EAT-------A--TKFNPNRCGFEG--KGEI-------WVEDILNLG--VSPAKLIEIVKKRFISLG-GVIFEGYSVSSI 231 (535)
Q Consensus 173 ~~~-------~--~~~~~~~~~~~~--~~~~-------~~~~~~~~~--v~~~~l~~~L~~~a~~~G-~~i~~~~~V~~i 231 (535)
... . ..+. +.|.. .+.. +...+..+. .....+.+.|.+.+.+.| +++++++.|+++
T Consensus 85 ~~~~~~~~~i~~L~~~G---v~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l 161 (602)
T 1kf6_A 85 YFVHHCPTEMTQLELWG---CPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDI 161 (602)
T ss_dssp HHHHHHHHHHHHHHHTT---CCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEE
T ss_pred HHHHHHHHHHHHHHHcC---CCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEE
Confidence 111 0 0110 11110 0000 000000000 113578889999998888 899999999999
Q ss_pred EEeCCeE---EEE-EcCCe--EEEcCeEEEccCCChHHHH
Q 009427 232 CTYENAA---VLL-LAEGK--ILSSHLIIDAMGNFSPVVK 265 (535)
Q Consensus 232 ~~~~~gv---~v~-~~~G~--~i~a~lVV~AdG~~S~v~~ 265 (535)
..+++.+ .+. +.+|+ ++.|+.||+|+|.+|.+..
T Consensus 162 ~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~ 201 (602)
T 1kf6_A 162 LVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYR 201 (602)
T ss_dssp EEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSS
T ss_pred EEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccccc
Confidence 8877643 232 24675 6999999999999997754
No 73
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.94 E-value=5.6e-09 Score=105.08 Aligned_cols=111 Identities=17% Similarity=0.268 Sum_probs=80.8
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
.++||+||| |++|+++|+.|+++|++|+|||+...++.... . ..+ ..+ +.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~---~----------~~~----------~~~-~~----- 65 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAE---A----------PLV----------ENY-LG----- 65 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGG---C----------SCB----------CCB-TT-----
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccc---c----------chh----------hhc-CC-----
Confidence 369999999 99999999999999999999999643321000 0 000 000 00
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
+ ..++...+.+.+.+.+.+.|++++. ++|+++..+++.+.|.+ ++.++.+|.||+|+|..+
T Consensus 66 -----~------~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 66 -----F------KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTH 126 (319)
T ss_dssp -----B------SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEE
T ss_pred -----C------cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCc
Confidence 0 1234556777788888888999887 78999988777777777 666899999999999754
No 74
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.93 E-value=6.8e-09 Score=102.71 Aligned_cols=109 Identities=19% Similarity=0.203 Sum_probs=80.3
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
++||+||| |++|+++|..|+++|++|+|+|+....+.. + .. ...|.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~--~-------------~~----------~~~~~-------- 48 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRF--A-------------SH----------SHGFL-------- 48 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGG--C-------------SC----------CCSST--------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccccc--c-------------hh----------hcCCc--------
Confidence 48999999 999999999999999999999987421110 0 00 00000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhC-CCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
. ....+...+.+.+.+.+.+. +++++ +++|+++..+++++.+.+.+|+++.+|.||+|+|..+
T Consensus 49 -~--------~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 49 -G--------QDGKAPGEIIAEARRQIERYPTIHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTD 112 (297)
T ss_dssp -T--------CTTCCHHHHHHHHHHHHTTCTTEEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEE
T ss_pred -C--------CCCCCHHHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCC
Confidence 0 01234566777888888777 45655 4599999888888889998888899999999999864
No 75
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.93 E-value=2.3e-08 Score=109.43 Aligned_cols=154 Identities=14% Similarity=0.146 Sum_probs=88.5
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCccccc------------------cc-HHHHHHHHHcCC--CC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWN------------------IS-RKELLELVESGI--LV 167 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~------------------is-~~~l~~L~~lGl--~~ 167 (535)
++||+||| |++|+++|+.|+++|++|+|+|+....+....+. .+ ...++.+.+.|. .+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 68999999 9999999999999999999999986443221100 01 111222222221 11
Q ss_pred hHhHHHHHh-----hhc-CCCcccccc----cCcce--eeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeC
Q 009427 168 EDDIDEATA-----TKF-NPNRCGFEG----KGEIW--VEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE 235 (535)
Q Consensus 168 ~~~~~~~~~-----~~~-~~~~~~~~~----~~~~~--~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~ 235 (535)
.+.++.... ..| ....+.|.. .+..+ .............+.+.|.+.+.+.|++++++++|+++..++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~ 285 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA 285 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECC
Confidence 211111100 000 000000100 00000 000001112356788999999999999999999999997765
Q ss_pred -Ce---EEEEEcCCe--EEEcCeEEEccCCChHH
Q 009427 236 -NA---AVLLLAEGK--ILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 236 -~g---v~v~~~~G~--~i~a~lVV~AdG~~S~v 263 (535)
+. +++...+|+ ++.|+.||+|+|.++..
T Consensus 286 ~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~ 319 (572)
T 1d4d_A 286 SGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKN 319 (572)
T ss_dssp -CCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred CCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccC
Confidence 43 333333564 68999999999998854
No 76
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.92 E-value=1.4e-08 Score=111.50 Aligned_cols=154 Identities=16% Similarity=0.220 Sum_probs=88.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccc-------cc------cHH-HHHHHHHc--CCCChHhHH
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEW-------NI------SRK-ELLELVES--GILVEDDID 172 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~-------~i------s~~-~l~~L~~l--Gl~~~~~~~ 172 (535)
++|||||| |++|+++|+.|+++|.+|+||||....+....+ .. +.. .+...... ++.+.+.++
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 86 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIE 86 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 58999999 999999999999999999999998654321110 01 111 12222221 232322222
Q ss_pred HHHh------hhcCCCcccccc--cCcce-------e-------eeccccc--cCHHHHHHHHHHHHHhCCCEEEeCceE
Q 009427 173 EATA------TKFNPNRCGFEG--KGEIW-------V-------EDILNLG--VSPAKLIEIVKKRFISLGGVIFEGYSV 228 (535)
Q Consensus 173 ~~~~------~~~~~~~~~~~~--~~~~~-------~-------~~~~~~~--v~~~~l~~~L~~~a~~~G~~i~~~~~V 228 (535)
.... ..+....+.|.. .+..+ . ..+..+. .....+.+.|.+++.+.|++++++++|
T Consensus 87 ~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v 166 (588)
T 2wdq_A 87 YMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYA 166 (588)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETEEE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCcEE
Confidence 1110 000000011110 00000 0 0000000 113578889999999999999999999
Q ss_pred EEEEEe-CCeE---EEEE-cCCe--EEEcCeEEEccCCChHH
Q 009427 229 SSICTY-ENAA---VLLL-AEGK--ILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 229 ~~i~~~-~~gv---~v~~-~~G~--~i~a~lVV~AdG~~S~v 263 (535)
+++..+ ++.+ .+.. .+|+ ++.|+.||+|+|.++..
T Consensus 167 ~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 167 LDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp EEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred EEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 999875 4433 2222 3554 68999999999998864
No 77
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.92 E-value=8.5e-09 Score=105.65 Aligned_cols=136 Identities=18% Similarity=0.172 Sum_probs=83.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
++||+||| |++|+++|..|++.|+ +|+|||+..+++. |...... ..++.... ....|.- ..+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~---~~~~~~~------~~~~~~~~----~~~~~g~--~~~~ 68 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHS---FKHWPKS------TRTITPSF----TSNGFGM--PDMN 68 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHH---HHTSCTT------CBCSSCCC----CCGGGTC--CCTT
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCc---cccCccc------ccccCcch----hcccCCc--hhhh
Confidence 58999999 9999999999999999 9999999862211 1000000 00000000 0000000 0000
Q ss_pred ccCcceee--eccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 188 GKGEIWVE--DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 188 ~~~~~~~~--~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
........ ......+++..+.+.+.+.+.+.|++++.+++|+++..+++++.|.+.++ ++.+|.||+|+|.++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 69 AISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp CSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTT
T ss_pred hccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCC
Confidence 00000000 00011234566777788888888999999999999987766788887666 689999999999875
No 78
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.91 E-value=3e-09 Score=107.53 Aligned_cols=117 Identities=16% Similarity=0.150 Sum_probs=80.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
.+||+||| |++|+++|+.|++.|++|+|||+...... ... |.+. +. ....
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~-~~g-------------g~~~-----------~~-~~~~--- 58 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDI-APG-------------GQLT-----------TT-TDVE--- 58 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTB-CTT-------------CGGG-----------GC-SEEC---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCcccc-CCC-------------ceee-----------ec-cccc---
Confidence 58999999 99999999999999999999998210000 000 0000 00 0000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChH
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~ 262 (535)
....+ ...++...+.+.+.+.+.+.|++++.++ |+++..+++.++|.+ +|.++++|.||+|+|.++.
T Consensus 59 ~~~~~-----~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 59 NFPGF-----PEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp CSTTC-----TTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred cCCCC-----ccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcC
Confidence 00000 1123456777888888888999999886 888876666777877 7888999999999998753
No 79
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.90 E-value=1.4e-08 Score=110.35 Aligned_cols=134 Identities=18% Similarity=0.201 Sum_probs=83.4
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCC-CChHhHHHHHhhhcCCCcccc
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGI-LVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl-~~~~~~~~~~~~~~~~~~~~~ 186 (535)
.++||+||| |++|+++|+.|++.|++|+|||+....++ .|... .. -|+ .+. . ...|. ..|
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG--~w~~~-----~~--pg~~~d~---~---~~~~~---~~f 76 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG--VWYWN-----RY--PGARCDI---E---SIEYC---YSF 76 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT--HHHHC-----CC--TTCBCSS---C---TTTSS---CCS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC--ccccc-----CC--Cceeecc---c---ccccc---ccc
Confidence 369999999 99999999999999999999999853332 11000 00 010 000 0 00000 000
Q ss_pred cccCcce-eeeccccccCHHHHHHHHHHHHHhCC--CEEEeCceEEEEEEeCC--eEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 187 EGKGEIW-VEDILNLGVSPAKLIEIVKKRFISLG--GVIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 187 ~~~~~~~-~~~~~~~~v~~~~l~~~L~~~a~~~G--~~i~~~~~V~~i~~~~~--gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
. .... .......-.+...+.+.+.+.+.+.+ ..++.+++|+++..+++ .+.|++++|++++||.||+|+|.+|
T Consensus 77 ~--~~~~~~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 77 S--EEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLS 154 (542)
T ss_dssp C--HHHHHHCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCC
T ss_pred C--hhhhhccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCC
Confidence 0 0000 00000011245566677766666665 57889999999987654 6788888888899999999999876
Q ss_pred H
Q 009427 262 P 262 (535)
Q Consensus 262 ~ 262 (535)
.
T Consensus 155 ~ 155 (542)
T 1w4x_A 155 V 155 (542)
T ss_dssp C
T ss_pred C
Confidence 3
No 80
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.90 E-value=9e-09 Score=103.54 Aligned_cols=114 Identities=21% Similarity=0.301 Sum_probs=82.5
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
.+||+||| |++|+++|+.|+++|++|+|||+....++ .+.. .+..... +..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG---------~~~~------------------~~~~~~~-~~~ 58 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGG---------QLSA------------------LYPEKYI-YDV 58 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH---------HHHH------------------HCTTSEE-CCS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc---------eehh------------------cCCCceE-ecc
Confidence 58999999 99999999999999999999999843221 0000 0110000 000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCC-eEEEEEcCCeEEEcCeEEEccCCC
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~-gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
.+ + ..+....+...+.+.+.+.|++++.+++|+++..+++ .+.|.+.+|+ +.+|.||.|+|..
T Consensus 59 ~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 59 AG--F------PKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp TT--C------SSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred CC--C------CCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCC
Confidence 00 0 0134567778888888888999999999999987766 6788886665 9999999999984
No 81
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.90 E-value=9.1e-09 Score=111.81 Aligned_cols=133 Identities=18% Similarity=0.285 Sum_probs=85.7
Q ss_pred cccEEEEc-chHHHHHHHHHH-HCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALS-FKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LA-r~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
++||+||| |++|+++|+.|+ +.|++|+|||+....++ .|... .. -|+.. .+. ...|... +
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GG--tw~~~-----~y--pg~~~--d~~---s~~~~~~---~- 69 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGG--TWYWN-----RY--PGALS--DTE---SHLYRFS---F- 69 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCT--HHHHC-----CC--TTCEE--EEE---GGGSSCC---S-
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCC--ccccc-----CC--CCcee--cCC---cceeeec---c-
Confidence 58999999 999999999999 99999999999743322 11000 00 01000 000 0000000 0
Q ss_pred ccCcce-eeeccccccCHHHHHHHHHHHHHhCCC--EEEeCceEEEEEEeCC--eEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 188 GKGEIW-VEDILNLGVSPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 188 ~~~~~~-~~~~~~~~v~~~~l~~~L~~~a~~~G~--~i~~~~~V~~i~~~~~--gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
....+ .........+...+.+.+.+.+.+.|+ .++.+++|+++..+++ .++|++++|++++||.||+|+|.+|
T Consensus 70 -~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 70 -DRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp -CHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred -ccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 00000 000001123456777888888888887 7899999999988766 6888888888899999999999865
No 82
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.89 E-value=8.1e-09 Score=103.35 Aligned_cols=117 Identities=19% Similarity=0.185 Sum_probs=78.9
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
+.|||+||| ||+|+++|+.|+++|++|+|+|+...++.... |.+. ....+ .
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~--------------G~~~------------~~~~i-~- 54 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG--------------GQLT------------TTTII-E- 54 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT--------------CGGG------------GSSEE-C-
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC--------------CCcC------------ChHHh-h-
Confidence 369999999 99999999999999999999999854332100 1100 00000 0
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
.-..+ ...++...+...+.+.+.+.+.++... .+.......+...+.+.++.++.++.||.|+|+.
T Consensus 55 -~~~g~-----~~~i~~~~l~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 55 -NFPGF-----PNGIDGNELMMNMRTQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp -CSTTC-----TTCEEHHHHHHHHHHHHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEE
T ss_pred -hccCC-----cccCCHHHHHHHHHHHHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEccccc
Confidence 00000 112345667777888888888887754 4666555556666777778899999999999964
No 83
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.89 E-value=1.1e-08 Score=104.26 Aligned_cols=131 Identities=18% Similarity=0.174 Sum_probs=78.0
Q ss_pred ccEEEEc-chHHHHHHHHHHH---CCCcEEEEcccCCCCCc-ccc----------c-------ccH-------HHHHHHH
Q 009427 111 FDVIVCG-GTLGIFIATALSF---KGLRVAIVERNTLKGRE-QEW----------N-------ISR-------KELLELV 161 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr---~G~~V~liEr~~~~~~~-~~~----------~-------is~-------~~l~~L~ 161 (535)
+||+||| |++|+++|+.|++ .|++|+|+||....++. ... + ... ..++.+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 6999999 9999999999999 99999999998532210 000 0 000 0011111
Q ss_pred HcCCCChHhHHHHHhhhcCCCcccccc-cC-cceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE
Q 009427 162 ESGILVEDDIDEATATKFNPNRCGFEG-KG-EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV 239 (535)
Q Consensus 162 ~lGl~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~ 239 (535)
..|+ ...+......... .. ..+.. .. ....+.+.+.+++ |++|+.+++|++|+.++++++
T Consensus 82 ~~g~----------~~~~~~~~~~~~~~~~~~~~~~-~~----g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~~~ 143 (342)
T 3qj4_A 82 AYGV----------LRPLSSPIEGMVMKEGDCNFVA-PQ----GISSIIKHYLKES---GAEVYFRHRVTQINLRDDKWE 143 (342)
T ss_dssp HTTS----------CEECCSCEETCCC--CCEEEEC-TT----CTTHHHHHHHHHH---TCEEESSCCEEEEEECSSSEE
T ss_pred hCCC----------eecCchhhcceeccCCccceec-CC----CHHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCEEE
Confidence 1111 0111111000000 00 01111 10 1123444454443 899999999999998888899
Q ss_pred EEEcCCeEEEcCeEEEccCC
Q 009427 240 LLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 240 v~~~~G~~i~a~lVV~AdG~ 259 (535)
|++.+|+++++|.||.|+..
T Consensus 144 v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 144 VSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp EEESSSCCEEESEEEECSCH
T ss_pred EEECCCCEEEcCEEEECCCH
Confidence 99888877899999999874
No 84
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.89 E-value=6.4e-09 Score=104.93 Aligned_cols=117 Identities=19% Similarity=0.211 Sum_probs=82.0
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
.+||+||| |++|+++|+.|+++|++|+|||+.+.... ... |.+. +......+
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~-~~g-------------g~~~-----------~~~~~~~~-- 74 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGI-AAG-------------GQLT-----------TTTEIENF-- 74 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTB-CTT-------------CGGG-----------GSSEECCS--
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCC-CcC-------------cccc-----------cchhhccc--
Confidence 69999999 99999999999999999999999641110 000 1100 00000000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc---CCeEEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~---~G~~i~a~lVV~AdG~~S 261 (535)
.+ ....+....+.+.+.+.+.+.|++++.++ |+++..+++.+.+.+. ++.++.+|.||+|+|..+
T Consensus 75 ~~-------~~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 75 PG-------FPDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp TT-------CTTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEE
T ss_pred CC-------CcccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCc
Confidence 00 01113456777888888989999999988 9999877777887773 567899999999999754
No 85
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.88 E-value=9e-09 Score=104.44 Aligned_cols=112 Identities=20% Similarity=0.245 Sum_probs=80.0
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
..+||+||| |++|+++|+.|++.|++|+|||+...++. +. +......+
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~---~~---------------------------~~~~~~~~- 61 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGA---LM---------------------------TTTDVENY- 61 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCG---GG---------------------------SCSCBCCS-
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCc---ee---------------------------ccchhhhc-
Confidence 369999999 99999999999999999999997633221 00 00000000
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEE-EEcCCeEEEcCeEEEccCCCh
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVL-LLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v-~~~~G~~i~a~lVV~AdG~~S 261 (535)
. . ....++...+.+.+.+.+.+.|++++.++ |+++.. ++.+.| .+.+|.++.+|.||+|+|..+
T Consensus 62 -~--~-----~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 62 -P--G-----FRNGITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAA 126 (335)
T ss_dssp -T--T-----CTTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEE
T ss_pred -C--C-----CCCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCc
Confidence 0 0 01124556677788888888899999886 888865 555666 677788899999999999754
No 86
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.88 E-value=5.4e-09 Score=113.60 Aligned_cols=153 Identities=12% Similarity=0.154 Sum_probs=80.8
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCccccc---c----c-HHH----HHHHHHc--CCCChHhHHHH
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWN---I----S-RKE----LLELVES--GILVEDDIDEA 174 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~---i----s-~~~----l~~L~~l--Gl~~~~~~~~~ 174 (535)
++|||||| |++|+++|+.|++ |.+|+||||....+....+. + . ... ++..... |+.+.+.++..
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v~~~ 86 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFV 86 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHHHHH
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHHHHH
Confidence 68999999 9999999999999 99999999987544322111 1 0 111 1111111 23333222211
Q ss_pred Hh------hhcCCCcccccc------cCc-------ceeeecc-c-cccCHHHHHHHHHHHHHh-CCCEEEeCceEEEEE
Q 009427 175 TA------TKFNPNRCGFEG------KGE-------IWVEDIL-N-LGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSIC 232 (535)
Q Consensus 175 ~~------~~~~~~~~~~~~------~~~-------~~~~~~~-~-~~v~~~~l~~~L~~~a~~-~G~~i~~~~~V~~i~ 232 (535)
.. ..+....+.|.. .+. .+...+. . .......+.+.|.+++.+ .|+++++++.|+++.
T Consensus 87 ~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~L~ 166 (540)
T 1chu_A 87 ASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVDLI 166 (540)
T ss_dssp HHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEEEEE
T ss_pred HHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEEEE
Confidence 00 000000011100 000 0000000 0 001234567778888888 699999999999998
Q ss_pred E-eCC------eEE-EEE---cCCe--EEEcCeEEEccCCChHH
Q 009427 233 T-YEN------AAV-LLL---AEGK--ILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 233 ~-~~~------gv~-v~~---~~G~--~i~a~lVV~AdG~~S~v 263 (535)
. +++ .+. |.+ .+|+ ++.|+.||+|+|.++.+
T Consensus 167 ~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 167 VSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKV 210 (540)
T ss_dssp EGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGG
T ss_pred EcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccc
Confidence 7 334 332 333 2564 69999999999999865
No 87
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.87 E-value=4.7e-09 Score=111.25 Aligned_cols=145 Identities=15% Similarity=0.107 Sum_probs=85.5
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCC--cEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHh------HHH------H
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGL--RVAIVERNTLKGREQEWNISRKELLELVESGILVEDD------IDE------A 174 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~------~~~------~ 174 (535)
.+||+||| |++|+++|..|++.|. +|+|+|+....++ .|......-. ..++..... +.. .
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG--~~~~~~~~~~---~~~ip~~~~~~~~~~~~~g~~~~~~ 80 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGG--VWNYTSTLSN---KLPVPSTNPILTTEPIVGPAALPVY 80 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSST--TCSCCSCCCS---CCCSSBCCTTCCCCCBCCSSSCCBC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCC--eecCCCCCCc---ccccccccccccccccccccccCCc
Confidence 58999999 9999999999999999 9999999843222 1211100000 000000000 000 0
Q ss_pred HhhhcCCCc-------ccccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcC---
Q 009427 175 TATKFNPNR-------CGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE--- 244 (535)
Q Consensus 175 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~--- 244 (535)
....|..-. ..|. ...+ ......-.++..+.+.+.+.+.+.+..++.+++|+++..+++++.|++.+
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~ 157 (447)
T 2gv8_A 81 PSPLYRDLQTNTPIELMGYC--DQSF-KPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKA 157 (447)
T ss_dssp CCCCCTTCBCSSCHHHHSCT--TCCC-CTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESST
T ss_pred cCchhhhhccCCCHHHhccC--CCCC-CCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCC
Confidence 000000000 0000 0000 00001113466777888887777777888999999998888888888765
Q ss_pred Ce---EEEcCeEEEccCCChH
Q 009427 245 GK---ILSSHLIIDAMGNFSP 262 (535)
Q Consensus 245 G~---~i~a~lVV~AdG~~S~ 262 (535)
|+ ++.+|.||+|+|++|.
T Consensus 158 G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 158 GSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp TCCEEEEEESEEEECCCSSSS
T ss_pred CCeeEEEEeCEEEECCCCCCC
Confidence 65 7999999999999763
No 88
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.87 E-value=1.6e-08 Score=112.19 Aligned_cols=60 Identities=13% Similarity=0.175 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeE---EEEE-cCCe--EEEcCeEEEccCCChHH
Q 009427 204 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA---VLLL-AEGK--ILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 204 ~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv---~v~~-~~G~--~i~a~lVV~AdG~~S~v 263 (535)
...+...|.+.+.+.|+++++++.|+++..+++.+ ++.. .+|+ .+.|+.||+|+|.++..
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 35788899999988899999999999998776633 3322 4564 58999999999999854
No 89
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.87 E-value=1.8e-08 Score=109.76 Aligned_cols=133 Identities=19% Similarity=0.267 Sum_probs=85.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
++|||||| |++|+++|+.|++.|++|+|||++...++ .|... .. -|+.. .+. ...|... |
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG--tw~~~-----~y--pg~~~--dv~---s~~y~~~---f-- 81 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGG--VWYWN-----RY--PGARC--DVE---SIDYSYS---F-- 81 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT--HHHHC-----CC--TTCBC--SSC---TTTSSCC---S--
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCC--ccccC-----CC--CCcee--CCC---chhcccc---c--
Confidence 68999999 99999999999999999999999743222 11000 00 01100 000 0001000 0
Q ss_pred cCcce-eeeccccccCHHHHHHHHHHHHHhCCC--EEEeCceEEEEEEeCC--eEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 189 KGEIW-VEDILNLGVSPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~-~~~~~~~~v~~~~l~~~L~~~a~~~G~--~i~~~~~V~~i~~~~~--gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
....+ ..+......+...+.+.+.+.+.+.|+ .++.+++|+++..+++ .++|++++|++++||.||.|+|..|
T Consensus 82 ~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 82 SPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLS 159 (549)
T ss_dssp CHHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEE
T ss_pred ccccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCC
Confidence 00000 000001123456777888888888887 7899999999987765 6788888888899999999999755
No 90
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.84 E-value=9.1e-09 Score=103.28 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=79.0
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
.+||+||| |++|+++|+.|++.|++|+|+|+...++. +.. . .... . +
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~---~~~--------------~---------~~~~-~---~-- 52 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQ---LTT--------------T---------TEVE-N---W-- 52 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGG---GGG--------------C---------SBCC-C---S--
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCce---Eec--------------c---------hhhh-h---C--
Confidence 58999999 99999999999999999999997633221 000 0 0000 0 0
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
..+ ...++...+.+.+.+.+.+.|++++.++ |+.+..+++.+.+ +.++.++.+|.||+|+|..+
T Consensus 53 --~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 53 --PGD-----PNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGASA 116 (320)
T ss_dssp --TTC-----CSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCEEE
T ss_pred --CCC-----CCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCc
Confidence 000 0113455667778888888899999886 8888766666777 55778899999999999754
No 91
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.83 E-value=4e-08 Score=105.00 Aligned_cols=148 Identities=16% Similarity=0.208 Sum_probs=85.2
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCccccc-------c----cH-HHHHH-HHH-cCCCChHhHHHHH-
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWN-------I----SR-KELLE-LVE-SGILVEDDIDEAT- 175 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~-------i----s~-~~l~~-L~~-lGl~~~~~~~~~~- 175 (535)
|||||| |++|+++|+.|++.|.+|+||||.. .++...+. . +. ..+.. +.. .++.+.+.++...
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~-~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRI-DGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSST-TCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 899999 9999999999999999999999983 22221110 0 11 11111 111 1232322221110
Q ss_pred ------h--hhcCCCcccccc---cCcceeeec-cc-cccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE-EE
Q 009427 176 ------A--TKFNPNRCGFEG---KGEIWVEDI-LN-LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LL 241 (535)
Q Consensus 176 ------~--~~~~~~~~~~~~---~~~~~~~~~-~~-~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~-v~ 241 (535)
. ..+. +.|.. ....+...+ .. .......+.+.|.+.+.+.|++++++++| ++..+++.+. +.
T Consensus 80 ~~~~~i~~l~~~G---v~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~ 155 (472)
T 2e5v_A 80 EAKNVIETFESWG---FEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFV 155 (472)
T ss_dssp HHHHHHHHHHHTT---CCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEE
T ss_pred HHHHHHHHHHHcC---CCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEE
Confidence 0 0110 11100 000000000 00 11234678888999888889999999999 9987766542 23
Q ss_pred Ec-CCeEEEcCeEEEccCCChHHH
Q 009427 242 LA-EGKILSSHLIIDAMGNFSPVV 264 (535)
Q Consensus 242 ~~-~G~~i~a~lVV~AdG~~S~v~ 264 (535)
+. ++.++.|+.||+|+|.++.+.
T Consensus 156 v~~~~g~~~a~~VVlAtGg~~~~~ 179 (472)
T 2e5v_A 156 TEKRGLVEDVDKLVLATGGYSYLY 179 (472)
T ss_dssp ETTTEEECCCSEEEECCCCCGGGS
T ss_pred EEeCCCeEEeeeEEECCCCCcccC
Confidence 32 234588999999999998664
No 92
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.81 E-value=3e-08 Score=103.75 Aligned_cols=57 Identities=23% Similarity=0.405 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE-EEEcCCeEEEcCeEEEccCCChH
Q 009427 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (535)
Q Consensus 205 ~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~-v~~~~G~~i~a~lVV~AdG~~S~ 262 (535)
..+.+.|.+.+.+.|++|+.+++|++|..++++++ |.+ +|++++||.||.|+|.+..
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHH
Confidence 55788889999999999999999999998888876 666 5888999999999997643
No 93
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.80 E-value=2e-08 Score=109.19 Aligned_cols=135 Identities=19% Similarity=0.222 Sum_probs=84.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCC-CChHhHHHHHhhhcCCCccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGI-LVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl-~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
++|||||| |++|+++|+.|++.|++|+|||++...++ .|... .. -|. .+.. .......+.+...
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GG--tw~~~-----~y--Pg~~~d~~--~~~y~~~f~~~~~--- 74 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGG--TWYWN-----RY--PGCRLDTE--SYAYGYFALKGII--- 74 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT--HHHHC-----CC--TTCBCSSC--HHHHCHHHHTTSS---
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC--ccccC-----CC--CceeecCc--hhhcccccCcccc---
Confidence 68999999 99999999999999999999999853322 11000 00 010 0000 0000001111100
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCC--EEEeCceEEEEEEeCC--eEEEEEcCCeEEEcCeEEEccCCChHH
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~--~i~~~~~V~~i~~~~~--gv~v~~~~G~~i~a~lVV~AdG~~S~v 263 (535)
....+ .....+...+.+.+.+.+.+.|. .++.+++|+++..+++ .+.|++++|++++||.||.|+|..|.-
T Consensus 75 -~~~~~----~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 75 -PEWEW----SENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSAS 149 (545)
T ss_dssp -TTCCC----SBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC-
T ss_pred -cCCCc----cccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 00000 01113456667777777777776 7889999999987654 678888889899999999999976643
No 94
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.80 E-value=1.9e-08 Score=100.46 Aligned_cols=111 Identities=21% Similarity=0.225 Sum_probs=78.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
+|||+||| |++|+++|..|++.|++|+|||+.. ++. |.. ..++ ..+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~-gG~---~~~---------~~~~-----------~~~~-------- 48 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF-GGQ---ILD---------TVDI-----------ENYI-------- 48 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST-TGG---GGG---------CCEE-----------CCBT--------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC-Cce---ecc---------cccc-----------cccc--------
Confidence 38999999 9999999999999999999998641 111 000 0000 0000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeC---CeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE---NAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~---~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
.. ...+...+.+.+.+.+.+.|++++.+++|+.+..+. +.+.+.+++|.++.+|.||+|+|..+
T Consensus 49 -~~--------~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 49 -SV--------PKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp -TB--------SSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred -Cc--------CCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 00 012345566777777888899999999999986542 25778887888899999999999754
No 95
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.78 E-value=3.9e-08 Score=98.55 Aligned_cols=109 Identities=23% Similarity=0.252 Sum_probs=70.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
+|||+||| ||+|+++|+.|++.|++|+|||++.+++. +.+ .+.. ..+ |. +
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~--~~~-----------~~~i----------~~~-p~---~-- 56 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQ--MAN-----------TEEV----------ENF-PG---F-- 56 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGG--GGG-----------CSCB----------CCS-TT---C--
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCe--eec-----------cccc----------CCc-CC---c--
Confidence 69999999 99999999999999999999999754432 100 0100 000 00 0
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
-.+....+.....+...+.+..+..+..+.... ..... +...+++++++|.+|+|+|+.
T Consensus 57 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 57 -----------EMITGPDLSTKMFEHAKKFGAVYQYGDIKSVED-KGEYK-VINFGNKELTAKAVIIATGAE 115 (312)
T ss_dssp -----------SSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEE-CSSCE-EEECSSCEEEEEEEEECCCEE
T ss_pred -----------cccchHHHHHHHHHHHhhccccccceeeeeeee-eecce-eeccCCeEEEeceeEEcccCc
Confidence 012334455556666667777777666555542 22233 333467889999999999964
No 96
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.77 E-value=6.9e-08 Score=103.37 Aligned_cols=58 Identities=21% Similarity=0.256 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE-EEEcCCeEEEcCeEEEccCCChH
Q 009427 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (535)
Q Consensus 205 ~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~-v~~~~G~~i~a~lVV~AdG~~S~ 262 (535)
..+.+.|.+.+++.|++|+.+++|++|..++++++ |++++|+++.||.||.+.+....
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~ 279 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHT 279 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHH
Confidence 46788899999999999999999999999988876 78889999999999998876543
No 97
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.75 E-value=3.3e-08 Score=103.55 Aligned_cols=55 Identities=16% Similarity=0.178 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 205 ~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
..+.+.|.+.+.+.|++|+.+++|++|..+++++ | +.+|+++.||.||.|+|.+.
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHH
Confidence 5677888888888999999999999998777777 5 44778899999999999764
No 98
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.75 E-value=7.6e-09 Score=106.21 Aligned_cols=51 Identities=20% Similarity=0.236 Sum_probs=42.6
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChHH
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~v 263 (535)
..+++..+.+.|.+.+.+.|+++++ ++|+++..+ .+ +||.||+|+|.+|..
T Consensus 137 ~~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~-----------~~-~a~~VV~A~G~~s~~ 187 (363)
T 1c0p_A 137 LSVHAPKYCQYLARELQKLGATFER-RTVTSLEQA-----------FD-GADLVVNATGLGAKS 187 (363)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT-----------CS-SCSEEEECCGGGGGT
T ss_pred ceecHHHHHHHHHHHHHHCCCEEEE-EEcccHhhc-----------Cc-CCCEEEECCCcchhh
Confidence 4589999999999999999999998 888887421 12 799999999999854
No 99
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.74 E-value=7.9e-08 Score=106.63 Aligned_cols=154 Identities=19% Similarity=0.215 Sum_probs=87.0
Q ss_pred cccEEEEc-chHHHHHHHHHH---H-CCCcEEEEcccCCCCCccc------cc--c----------cHHH-HHHHHH--c
Q 009427 110 TFDVIVCG-GTLGIFIATALS---F-KGLRVAIVERNTLKGREQE------WN--I----------SRKE-LLELVE--S 163 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LA---r-~G~~V~liEr~~~~~~~~~------~~--i----------s~~~-l~~L~~--l 163 (535)
++|||||| |++|+++|+.|+ + +|.+|+||||....+.... .+ + +... ++.... .
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~ 101 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDMM 101 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHhc
Confidence 58999999 999999999999 6 8999999999865322110 00 1 1111 222222 2
Q ss_pred CCCChHhHHHHHh------hhcCCCcccccc--cCcceeeeccccccCHHHHHHHHHHHHHhC-CC-EEEeCceEEEEEE
Q 009427 164 GILVEDDIDEATA------TKFNPNRCGFEG--KGEIWVEDILNLGVSPAKLIEIVKKRFISL-GG-VIFEGYSVSSICT 233 (535)
Q Consensus 164 Gl~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-G~-~i~~~~~V~~i~~ 233 (535)
++.+++.++.... ..+....+.|.. .+..+........++...+.+.|.+.+.+. |+ ++++++.|+++..
T Consensus 102 ~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~ 181 (643)
T 1jnr_A 102 GLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFELLK 181 (643)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEEEE
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEEE
Confidence 3333322211110 000000111111 111110000000122344667788888777 99 9999999999987
Q ss_pred eCC---eEE-EE---EcCCe--EEEcCeEEEccCCChHH
Q 009427 234 YEN---AAV-LL---LAEGK--ILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 234 ~~~---gv~-v~---~~~G~--~i~a~lVV~AdG~~S~v 263 (535)
+++ .+. |. ..+|+ .+.|+.||+|+|.++..
T Consensus 182 ~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 182 DNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp CTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred cCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 765 442 22 24554 68999999999998853
No 100
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.74 E-value=1.2e-07 Score=101.56 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHhCC-CEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 205 AKLIEIVKKRFISLG-GVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 205 ~~l~~~L~~~a~~~G-~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
..+.+.|.+.+.+.| ++|+.+++|++|+.+++++.|++.+|++++||.||.|.|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 457777888888888 89999999999988888888988888889999999999964
No 101
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.70 E-value=3.7e-09 Score=108.06 Aligned_cols=52 Identities=15% Similarity=0.241 Sum_probs=42.9
Q ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChHH
Q 009427 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 200 ~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~v 263 (535)
..+++..+.+.|.+.+++.|+++++ ++|++++.. ..++|+.||.|+|.+|..
T Consensus 137 ~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~-----------~~~~a~~VV~A~G~~s~~ 188 (351)
T 3g3e_A 137 LILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEV-----------AREGADVIVNCTGVWAGA 188 (351)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH-----------HHTTCSEEEECCGGGGGG
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh-----------hcCCCCEEEECCCcChHh
Confidence 5589999999999999999999998 888776321 126799999999999854
No 102
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.70 E-value=9.7e-08 Score=100.13 Aligned_cols=48 Identities=15% Similarity=0.123 Sum_probs=39.4
Q ss_pred HHHHHH-hCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 211 VKKRFI-SLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 211 L~~~a~-~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
+.+++. +.| +|+.+++|++|+.++++++|++.+|++++||.||.|.|.
T Consensus 209 l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~ 257 (431)
T 3k7m_X 209 LVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPM 257 (431)
T ss_dssp HHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCG
T ss_pred HHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCc
Confidence 344433 346 999999999998878889999888888999999999993
No 103
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.69 E-value=1.3e-07 Score=94.30 Aligned_cols=108 Identities=16% Similarity=0.180 Sum_probs=76.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEE-EcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAI-VERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~l-iEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
.+||+||| |++|+++|..|+++|++|+| +||..+++. +... .. ...| |.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~---~~~~----------~~----------~~~~-~~----- 54 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQ---ITSS----------SE----------IENY-PG----- 54 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGG---GGGC----------SC----------BCCS-TT-----
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCce---eeee----------ce----------eccC-CC-----
Confidence 68999999 99999999999999999999 999644321 0000 00 0000 00
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeC--CeEEEEEc-CCeEEEcCeEEEccCC
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE--NAAVLLLA-EGKILSSHLIIDAMGN 259 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~--~gv~v~~~-~G~~i~a~lVV~AdG~ 259 (535)
+ ...+....+...+.+.+.+.|++++.+ +|+++ .++ +.+.+.+. ++ ++.+|.||.|+|.
T Consensus 55 -----~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 55 -----V-----AQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp -----C-----CSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCE
T ss_pred -----C-----CCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCC
Confidence 0 112345677788888888889999887 89998 666 66774332 34 8999999999996
No 104
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.68 E-value=4.6e-08 Score=103.47 Aligned_cols=42 Identities=17% Similarity=0.240 Sum_probs=37.6
Q ss_pred CEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 220 GVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 220 ~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
++|+.+++|++|+.+++++.|++.+|++++||.||.|.....
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKA 289 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHH
Confidence 689999999999988888999998888899999999998644
No 105
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.67 E-value=9.7e-08 Score=103.25 Aligned_cols=112 Identities=21% Similarity=0.269 Sum_probs=80.8
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
..+||+||| ||+|+++|+.|++.|++|+|+|+. .++. +.. ..++ +. +.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~-~GG~---~~~---------~~~~---------------~~---~~ 259 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER-FGGQ---VLD---------TVDI---------------EN---YI 259 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTGG---GTT---------CSCB---------------CC---BT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC-CCCc---ccc---------cccc---------------cc---cC
Confidence 469999999 999999999999999999999974 1111 000 0010 00 00
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeC---CeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE---NAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~---~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
. . ...+...+.+.+.+.+.+.|++++.+++|+.+..+. +.+.|.+.+|.++++|.||+|+|+.+
T Consensus 260 --~------~--~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 260 --S------V--PKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp --T------B--SSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred --C------C--CCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 0 0 012455677788888888899999999999986432 25778887888899999999999754
No 106
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.65 E-value=5e-08 Score=108.28 Aligned_cols=154 Identities=13% Similarity=0.036 Sum_probs=87.3
Q ss_pred cccEEEEc-chHHHHHHHHHHHC------CCcEEEEcccCCCCCcc--cc--c-------cc-HHHHHHHH--HcCCCCh
Q 009427 110 TFDVIVCG-GTLGIFIATALSFK------GLRVAIVERNTLKGREQ--EW--N-------IS-RKELLELV--ESGILVE 168 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~------G~~V~liEr~~~~~~~~--~~--~-------is-~~~l~~L~--~lGl~~~ 168 (535)
++|||||| |++|+++|+.|+++ |.+|+||||....+... .. . .+ ...++... ..|+.++
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl~d~ 101 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMGLVRE 101 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTTCCCH
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcCCCccH
Confidence 59999999 99999999999998 99999999986543221 11 1 11 11122111 1244333
Q ss_pred HhHHHHHh-------------hhcCC---C-ccc-------c--cccCcceeeecc--ccccCHHHHHHHHHHHHHhC--
Q 009427 169 DDIDEATA-------------TKFNP---N-RCG-------F--EGKGEIWVEDIL--NLGVSPAKLIEIVKKRFISL-- 218 (535)
Q Consensus 169 ~~~~~~~~-------------~~~~~---~-~~~-------~--~~~~~~~~~~~~--~~~v~~~~l~~~L~~~a~~~-- 218 (535)
+.++.... ..|.. . ... | ..........+. ...+....+.+.|.+++.+.
T Consensus 102 ~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~~~~~ 181 (662)
T 3gyx_A 102 DLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAKNALG 181 (662)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHHhcCC
Confidence 22211110 01110 0 000 0 000000000000 01122345778888888887
Q ss_pred CCEEEeCceEEEEEEeCC---eEE---EE-EcCC--eEEEcCeEEEccCCChHH
Q 009427 219 GGVIFEGYSVSSICTYEN---AAV---LL-LAEG--KILSSHLIIDAMGNFSPV 263 (535)
Q Consensus 219 G~~i~~~~~V~~i~~~~~---gv~---v~-~~~G--~~i~a~lVV~AdG~~S~v 263 (535)
|+++++++.|+++..+++ .+. +. ..+| ..+.|+.||+|+|.++.+
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp TTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 999999999999988766 332 22 2345 368999999999998753
No 107
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.64 E-value=1.8e-07 Score=99.68 Aligned_cols=139 Identities=19% Similarity=0.246 Sum_probs=84.1
Q ss_pred ccEEEEc-chHHHHHHHHHHH---CCCc---EEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcC---
Q 009427 111 FDVIVCG-GTLGIFIATALSF---KGLR---VAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFN--- 180 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr---~G~~---V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~--- 180 (535)
+||+||| |++|+++|..|++ .|++ |+|||+....++ .|...... .+...|+... ...|.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG--~w~~~~~~--g~~~~g~~~~-------~~~y~~l~ 71 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGG--QWNYTWRT--GLDENGEPVH-------SSMYRYLW 71 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCG--GGSCCSCC--SBCTTSSBCC-------CCCCTTCB
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCC--EeecCCCC--CccccCCCCc-------Cccccchh
Confidence 6999999 9999999999999 9999 999999753222 12110000 0000011000 00110
Q ss_pred ---CC-cccccccCcceeee---ccccccCHHHHHHHHHHHHHhCCCE--EEeCceEEEEEEeCC--eEEEEEcC---C-
Q 009427 181 ---PN-RCGFEGKGEIWVED---ILNLGVSPAKLIEIVKKRFISLGGV--IFEGYSVSSICTYEN--AAVLLLAE---G- 245 (535)
Q Consensus 181 ---~~-~~~~~~~~~~~~~~---~~~~~v~~~~l~~~L~~~a~~~G~~--i~~~~~V~~i~~~~~--gv~v~~~~---G- 245 (535)
+. ...+.. -.+... .....++...+.+.+.+.+.+.|+. ++.+++|+++...++ .+.|++.+ |
T Consensus 72 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~ 149 (464)
T 2xve_A 72 SNGPKECLEFAD--YTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDT 149 (464)
T ss_dssp CSSCGGGTCBTT--BCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTE
T ss_pred hcCChhhcccCC--CCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCc
Confidence 00 000100 000000 0011245677888888888888887 889999999988766 67777654 4
Q ss_pred -eEEEcCeEEEccCCChH
Q 009427 246 -KILSSHLIIDAMGNFSP 262 (535)
Q Consensus 246 -~~i~a~lVV~AdG~~S~ 262 (535)
.++.+|.||+|+|++|.
T Consensus 150 ~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 150 IYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp EEEEEESEEEECCCSSSS
T ss_pred eEEEEcCEEEECCCCCCC
Confidence 57899999999998663
No 108
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.64 E-value=2.9e-07 Score=93.21 Aligned_cols=41 Identities=10% Similarity=0.091 Sum_probs=33.7
Q ss_pred CCCeeEeecCCCccccccccc--chHHHHHHHHHHHHHHHHHh
Q 009427 338 FNRILQFGDASGIQSPVSFGG--FGSLTRHLGRLSTGVYEAVR 378 (535)
Q Consensus 338 ~~rvlliGDAA~~~~P~~G~G--i~~al~da~~La~~l~~al~ 378 (535)
-++++++|||++.+++....| ++.++.+...+|+.|.++|.
T Consensus 283 vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 283 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp SBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 579999999999999887766 44567788899999988874
No 109
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.64 E-value=9.7e-08 Score=101.31 Aligned_cols=142 Identities=15% Similarity=0.126 Sum_probs=80.6
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCC-----CcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKG-----LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPN 182 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G-----~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~ 182 (535)
..+|||||| |++|+++|..|++.| ++|+|||+.+..+.....-.....++ ...+ ... .....|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~----~~~~-----~~l-~~~~~p~ 98 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQ----ISFL-----KDL-VSLRNPT 98 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCS----SCTT-----SSS-STTTCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCC----cchh-----hcc-ccccCCC
Confidence 368999999 999999999999999 99999999864332110000000000 0000 000 0000000
Q ss_pred -ccccc---c-cCccee-eeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEe---CCe--EEEEEcCCe----E
Q 009427 183 -RCGFE---G-KGEIWV-EDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY---ENA--AVLLLAEGK----I 247 (535)
Q Consensus 183 -~~~~~---~-~~~~~~-~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~---~~g--v~v~~~~G~----~ 247 (535)
...|. . .+..+. ............+.+.+...+.+.++.++.+++|++++.+ ++. ++|.+.+|. +
T Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~ 178 (463)
T 3s5w_A 99 SPYSFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELV 178 (463)
T ss_dssp CTTSHHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEE
T ss_pred CCCChhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEE
Confidence 00000 0 000000 0000111234566677777777778899999999999876 332 366666654 7
Q ss_pred EEcCeEEEccCCC
Q 009427 248 LSSHLIIDAMGNF 260 (535)
Q Consensus 248 i~a~lVV~AdG~~ 260 (535)
+.+|.||+|+|..
T Consensus 179 ~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 179 RTTRALVVSPGGT 191 (463)
T ss_dssp EEESEEEECCCCE
T ss_pred EEeCEEEECCCCC
Confidence 9999999999973
No 110
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.59 E-value=3.6e-07 Score=97.77 Aligned_cols=55 Identities=20% Similarity=0.312 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 205 ~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|++++.+++++.+.+++|+++.+|.||.|+|.
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCC
Confidence 4566777778888899999999999998877788888888888999999999995
No 111
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.58 E-value=1.1e-07 Score=101.10 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe-EEEEEcCCeEEEcCeEEEccCCC
Q 009427 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 206 ~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g-v~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
.+.+.|.+.+.+.|++|+.+++|++|+.++++ +.|++ ++.++.||.||.|++.+
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHH
Confidence 46778888888889999999999999887766 77766 55679999999999864
No 112
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.58 E-value=9.7e-08 Score=101.59 Aligned_cols=137 Identities=20% Similarity=0.125 Sum_probs=76.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
++||+||| |++|+++|+.|++.|++|+|||+..+++. ..+...-.-..+. ....+...+...+....+. .
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~gG~--~~~~g~~psk~ll-----~~~~~~~~~~~~~~~~g~~--~ 73 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYWGGV--CLNVGCIPSKALL-----RNAELVHIFTKDAKAFGIS--G 73 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCTTHH--HHHHSHHHHHHHH-----HHHHHHHHHHHHTTTTTEE--E
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCc--ccccCchhhHHHH-----HHHHHHHHHHHHHHhcCCC--C
Confidence 48999999 99999999999999999999999844321 1010000000110 0000001111011111110 0
Q ss_pred cCcceeeeccccccC----HHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCC--eEEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVS----PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~----~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G--~~i~a~lVV~AdG~~S 261 (535)
... .+.....-. ...+.+.+.+.+.+.|++++.++.+. .+++.+.+.+.+| .++++|.||+|+|..+
T Consensus 74 ~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~~ 146 (464)
T 2a8x_A 74 EVT---FDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSST 146 (464)
T ss_dssp CCE---ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEEE
T ss_pred CCc---cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCCC
Confidence 000 000000000 12344556666777899999887653 3566777877777 6899999999999865
No 113
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.56 E-value=1.3e-07 Score=101.27 Aligned_cols=141 Identities=22% Similarity=0.173 Sum_probs=74.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
++|||||| |++|+++|+.|++.|++|+|||+....++ .+.+...-.-..+. ...++...+. .+....+.+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG-~~~~~g~~psk~ll-----~~~~~~~~~~-~~~~~gi~~~~ 78 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGG-VCLNVGCIPSKALL-----HNAAVIDEVR-HLAANGIKYPE 78 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSH-HHHHHSHHHHHHHH-----HHHHHHHHHH-HGGGGTCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCC-ceeeecccchHHHH-----HHHHHHHHHH-HHHhCCcccCC
Confidence 69999999 99999999999999999999999532221 11111000000110 0000001110 01000000000
Q ss_pred cCcceeeeccccc-cCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCC------------eEEEcCeEEE
Q 009427 189 KGEIWVEDILNLG-VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG------------KILSSHLIID 255 (535)
Q Consensus 189 ~~~~~~~~~~~~~-v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G------------~~i~a~lVV~ 255 (535)
............ -....+.+.+.+.+.+.|++++.++.+. .+++.+.+.+.+| .++++|.||+
T Consensus 79 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lVi 154 (482)
T 1ojt_A 79 -PELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCII 154 (482)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEE
T ss_pred -CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEEE
Confidence 000000000000 0012233345556667899999887654 3566777765555 5799999999
Q ss_pred ccCCCh
Q 009427 256 AMGNFS 261 (535)
Q Consensus 256 AdG~~S 261 (535)
|+|.++
T Consensus 155 AtGs~p 160 (482)
T 1ojt_A 155 AAGSRV 160 (482)
T ss_dssp CCCEEE
T ss_pred CCCCCC
Confidence 999865
No 114
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.55 E-value=1.2e-07 Score=101.07 Aligned_cols=139 Identities=18% Similarity=0.182 Sum_probs=75.6
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC-CCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT-LKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~-~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
.++||+||| |++|+++|..|++.|++|+|||+.+ +++. ..+...-.-..+.. .....+. +...+....+.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~--~~~~g~~p~k~l~~----~~~~~~~-~~~~~~~~g~~~ 77 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGT--CLNVGCIPSKALLH----SSHMYHE-AKHSFANHGVKV 77 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCS--HHHHSHHHHHHHHH----HHHHHHH-HHHTHHHHTEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccc--ccCcCccchHHHHH----HHHHHHH-HHHHHHhcCccc
Confidence 369999999 9999999999999999999999984 3332 11110000001100 0000000 000000000000
Q ss_pred cccCcceeeeccccccC----HHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCC--eEEEcCeEEEccCCC
Q 009427 187 EGKGEIWVEDILNLGVS----PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNF 260 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~v~----~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G--~~i~a~lVV~AdG~~ 260 (535)
... ..+.....-. ...+.+.+.+.+.+.|++++.++.+. .+++.+.|.+.+| .++++|.||+|+|..
T Consensus 78 --~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~ 150 (470)
T 1dxl_A 78 --SNV--EIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF---VSPSEISVDTIEGENTVVKGKHIIIATGSD 150 (470)
T ss_dssp --SCE--EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---EETTEEEECCSSSCCEEEECSEEEECCCEE
T ss_pred --CCC--ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCEEEEEeCCCceEEEEcCEEEECCCCC
Confidence 000 0000000000 11233444555666789999988654 3567777777677 689999999999976
Q ss_pred h
Q 009427 261 S 261 (535)
Q Consensus 261 S 261 (535)
+
T Consensus 151 p 151 (470)
T 1dxl_A 151 V 151 (470)
T ss_dssp E
T ss_pred C
Confidence 5
No 115
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.53 E-value=6.2e-07 Score=95.09 Aligned_cols=137 Identities=18% Similarity=0.111 Sum_probs=75.9
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
++||+||| |++|+++|..|++.|++|+|||+..+++. +.+...-.-..+. ........+ ..+....+.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~gG~--~~~~g~~p~k~l~-----~~~~~~~~~-~~~~~~g~~~-- 72 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGV--CLNVGCIPSKALI-----SASHRYEQA-KHSEEMGIKA-- 72 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHH--HHHTSHHHHHHHH-----HHHHHHHHH-HTCGGGTEEC--
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCc--CcCcCchhhHHHH-----HHHHHHHHH-HHHHhcCccc--
Confidence 58999999 99999999999999999999999844321 1011100001110 000000011 0010000000
Q ss_pred cCcceeeeccccccC----HHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCC-eEEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVS----PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG-KILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~----~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G-~~i~a~lVV~AdG~~S 261 (535)
... ..+.....-. ...+.+.+.+.+.+.|++++.++.+. .+++.+.|.+.+| .++.+|.||+|+|..+
T Consensus 73 ~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~i~~d~lViATGs~p 145 (455)
T 1ebd_A 73 ENV--TIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF---VDANTVRVVNGDSAQTYTFKNAIIATGSRP 145 (455)
T ss_dssp CSC--EECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE---EETTEEEEEETTEEEEEECSEEEECCCEEE
T ss_pred CCC--ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ccCCeEEEEeCCCcEEEEeCEEEEecCCCC
Confidence 000 0000000000 01233445566667899999887653 3567788877777 6899999999999754
No 116
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.52 E-value=2.8e-07 Score=98.38 Aligned_cols=140 Identities=19% Similarity=0.179 Sum_probs=74.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
++||+||| |++|+++|+.|++.|++|+|||+....++. +.+...-.-..+.. .....+.. ...+....+.+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~-~~~~g~~psk~l~~----~~~~~~~~-~~~~~~~gi~~~- 77 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGT-CLNVGCIPSKALLN----NSHLFHQM-HTEAQKRGIDVN- 77 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH-HHHHSHHHHHHHHH----HHHHHHHH-HHTSGGGTEEEC-
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCc-cceeccHHHHHHHH----HHHHHHHH-HHHHHhcCcccC-
Confidence 58999999 999999999999999999999995322211 10100000000000 00000111 001110000000
Q ss_pred cCcceeeeccccc----cCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCC--eE------EEcCeEEEc
Q 009427 189 KGEIWVEDILNLG----VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KI------LSSHLIIDA 256 (535)
Q Consensus 189 ~~~~~~~~~~~~~----v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G--~~------i~a~lVV~A 256 (535)
.. ...+..... -....+...+.+.+.+.|++++.++.+.. +++.+.|.+.+| .+ +++|.||+|
T Consensus 78 -~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~---~~~~v~V~~~~G~~~~~~~~~~i~~d~lViA 152 (478)
T 1v59_A 78 -GD-IKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE---DETKIRVTPVDGLEGTVKEDHILDVKNIIVA 152 (478)
T ss_dssp -SC-EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES---SSSEEEEECCTTCTTCCSSCEEEEEEEEEEC
T ss_pred -CC-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc---cCCeEEEEecCCCcccccccceEEeCEEEEC
Confidence 00 000000000 00112333455566678999999887642 556677777666 46 999999999
Q ss_pred cCCCh
Q 009427 257 MGNFS 261 (535)
Q Consensus 257 dG~~S 261 (535)
+|..+
T Consensus 153 tGs~p 157 (478)
T 1v59_A 153 TGSEV 157 (478)
T ss_dssp CCEEE
T ss_pred cCCCC
Confidence 99765
No 117
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.48 E-value=5.1e-07 Score=96.01 Aligned_cols=53 Identities=17% Similarity=0.214 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEE---cCCeEEEcCeEEEccCCCh
Q 009427 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL---AEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 206 ~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~---~~G~~i~a~lVV~AdG~~S 261 (535)
.+.+.|.+.+ |++|+.+++|++|..+++++.|++ .+|++++||.||.|.+...
T Consensus 239 ~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 239 VLIDALAASL---GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHA 294 (478)
T ss_dssp HHHHHHHHHH---GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHH
T ss_pred HHHHHHHHHh---hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHH
Confidence 3555555544 678999999999987777788887 6777899999999998654
No 118
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.48 E-value=3.7e-07 Score=97.08 Aligned_cols=40 Identities=10% Similarity=-0.024 Sum_probs=36.3
Q ss_pred CEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 220 GVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 220 ~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
++|+.+++|++|+.++++++|++.+| +++||.||.|.+.+
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~ 288 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHP 288 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHH
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHH
Confidence 69999999999998888999988888 79999999999854
No 119
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.48 E-value=3.7e-07 Score=97.82 Aligned_cols=33 Identities=36% Similarity=0.621 Sum_probs=30.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
+|||+||| |++|+++|+.|++.|++|+||||..
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 59999999 9999999999999999999999864
No 120
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.47 E-value=2.3e-07 Score=98.89 Aligned_cols=33 Identities=39% Similarity=0.585 Sum_probs=31.9
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
+|||+||| |++|+++|+.|++.|++|+|||+..
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 69999999 9999999999999999999999985
No 121
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.44 E-value=7.8e-07 Score=94.67 Aligned_cols=132 Identities=17% Similarity=0.071 Sum_probs=71.5
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
+|||+||| |++|+++|..|++.|++|+||||....++. +.+...-.-..+... ....+........+....+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~-~~~~gciPsk~l~~~----a~~~~~~~~~~~~~~~~~~~- 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGN-CLYSGCVPSKTVREV----IQTAWRLTNIANVKIPLDFS- 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHH-HHHHSHHHHHHHHHH----HHHHHHHHHHHCSCCCCCHH-
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc-ccccCCCchHHHHHH----HHHHHHHHhcccCCCCcCHH-
Confidence 59999999 999999999999999999999965322211 001000000001000 00000000000000001000
Q ss_pred cCcceeeeccccccCHHH---HH--HHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeE--EEcCeEEEccCCC
Q 009427 189 KGEIWVEDILNLGVSPAK---LI--EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKI--LSSHLIIDAMGNF 260 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~---l~--~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~--i~a~lVV~AdG~~ 260 (535)
..... ... +. ..+.+.+.+.|++++.+ +++.+ +++.+.|...+|++ +.+|.||+|+|..
T Consensus 78 -------~~~~~---~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~i--d~~~~~V~~~~g~~~~~~~d~lviAtG~~ 143 (466)
T 3l8k_A 78 -------TVQDR---KDYVQELRFKQHKRNMSQYETLTFYKG-YVKIK--DPTHVIVKTDEGKEIEAETRYMIIASGAE 143 (466)
T ss_dssp -------HHHHH---HHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEE--ETTEEEEEETTSCEEEEEEEEEEECCCEE
T ss_pred -------HHHHH---HHhheeccccchHHHHHHhCCCEEEEe-EEEEe--cCCeEEEEcCCCcEEEEecCEEEECCCCC
Confidence 00000 011 11 33444445568888766 56665 46778888877877 9999999999963
No 122
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.42 E-value=1.3e-06 Score=94.17 Aligned_cols=53 Identities=11% Similarity=0.084 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 206 ~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
.+.+.|.+.. |++|+.+++|++|..++++++|.+.+|+++.||.||.|.+...
T Consensus 216 ~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 216 QVSERIMDLL---GDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHHHHHHH---GGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGG
T ss_pred HHHHHHHHHc---CCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHH
Confidence 3444444433 7889999999999887788888888888899999999998653
No 123
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.42 E-value=5.5e-07 Score=95.82 Aligned_cols=35 Identities=29% Similarity=0.407 Sum_probs=32.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLK 144 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~ 144 (535)
++||+||| |++|+++|+.|++.|++|+|||++.++
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~G 39 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIG 39 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 68999999 999999999999999999999998554
No 124
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.36 E-value=3.6e-06 Score=89.50 Aligned_cols=56 Identities=14% Similarity=0.105 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEE-eCCeE-EEEEcCCeEEEcCeEEEccCCC
Q 009427 205 AKLIEIVKKRFISLGGVIFEGYSVSSICT-YENAA-VLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 205 ~~l~~~L~~~a~~~G~~i~~~~~V~~i~~-~~~gv-~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
..+.+.|.+.+++.|++++.+++|++|.. +++.+ .|.+.+|++++||.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 46788899999999999999999999987 44443 4677778889999999999965
No 125
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.36 E-value=1.6e-06 Score=93.66 Aligned_cols=34 Identities=26% Similarity=0.418 Sum_probs=31.9
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.+|||+||| |++|+++|+.|++.|++|+|||+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 369999999 9999999999999999999999964
No 126
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.36 E-value=2e-06 Score=91.65 Aligned_cols=140 Identities=21% Similarity=0.197 Sum_probs=73.3
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
++||+||| |++|+++|..|++.|++|+|||+....++. +.+...-.-..+.. ............+.. ..+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~-~~~~g~~Psk~l~~----~~~~~~~~~~~~~~~--~g~~~ 78 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGT-CLNVGCIPSKALLN----NSHYYHMAHGTDFAS--RGIEM 78 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHH-HHHHSHHHHHHHHH----HHHHHHHHHSSHHHH--TTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCc-ccccCccchHHHHH----HHHHHHHhhhhhHhh--Ccccc
Confidence 69999999 999999999999999999999998432221 00100000001100 000000000000000 00000
Q ss_pred cCcceeeeccccccC----HHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcC-C-eEEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVS----PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE-G-KILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~----~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~-G-~~i~a~lVV~AdG~~S 261 (535)
.. ...+.....-. ...+...+.+.+.+.|++++.++.+ .+ +++.+.|.+.+ | .++++|.||+|+|..+
T Consensus 79 -~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~~~~~v~~~~gg~~~~~~d~lViAtGs~p 152 (474)
T 1zmd_A 79 -SE-VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-IT--GKNQVTATKADGGTQVIDTKNILIATGSEV 152 (474)
T ss_dssp -SC-EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EE--ETTEEEEECTTSCEEEEEEEEEEECCCEEE
T ss_pred -CC-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--cCCEEEEEecCCCcEEEEeCEEEECCCCCC
Confidence 00 00000000000 0112233455566789999988643 33 56777787766 4 5799999999999754
No 127
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.34 E-value=7.8e-07 Score=93.74 Aligned_cols=108 Identities=17% Similarity=0.282 Sum_probs=69.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCC--cEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGL--RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
.+|||||| |++|+++|..|++.|. +|+|||+.......+. . + ...+-.+...
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-~--------l---------------~~~~~~~~~~- 58 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLP-P--------L---------------SKAYLAGKAT- 58 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSG-G--------G---------------GTTTTTTCSC-
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCC-C--------C---------------cHHHhCCCCC-
Confidence 48999999 9999999999999998 7999998742211000 0 0 0000000000
Q ss_pred cccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
.... ... +.+.+.+.|++++.+++|+.+..++ ..|.+++|+++.+|.||+|+|..+
T Consensus 59 --~~~~--------~~~-------~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~~~~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 59 --AESL--------YLR-------TPDAYAAQNIQLLGGTQVTAINRDR--QQVILSDGRALDYDRLVLATGGRP 114 (431)
T ss_dssp --SGGG--------BSS-------CHHHHHHTTEEEECSCCEEEEETTT--TEEEETTSCEEECSEEEECCCEEE
T ss_pred --hHHh--------ccc-------CHHHHHhCCCEEEeCCEEEEEECCC--CEEEECCCCEEECCEEEEcCCCCc
Confidence 0000 000 1123346789999999999986433 356667788899999999999754
No 128
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.34 E-value=6.5e-07 Score=93.71 Aligned_cols=108 Identities=20% Similarity=0.209 Sum_probs=70.5
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCc--EEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccc
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLR--VAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~--V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~ 185 (535)
.++|||||| |++|+++|..|+++|++ |+|||+.+..+..+. . + ...+-.+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-~--------l---------------~~~~~~~~~- 62 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERP-P--------L---------------SKEYLAREK- 62 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSG-G--------G---------------GTTTTTTSS-
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcc-c--------C---------------CHHHHcCCC-
Confidence 368999999 99999999999999988 999999853221110 0 0 000100000
Q ss_pred ccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 186 FEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 186 ~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
.. . ..... ..+.+.+.+++++.+++|+.+. .+...|.+.+|.++.+|.+|.|+|..
T Consensus 63 ---~~-----~--~~~~~-------~~~~~~~~~i~~~~~~~v~~id--~~~~~v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 63 ---TF-----E--RICIR-------PAQFWEDKAVEMKLGAEVVSLD--PAAHTVKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp ---CS-----G--GGBSS-------CHHHHHHTTEEEEETCCEEEEE--TTTTEEEETTSCEEEEEEEEECCCEE
T ss_pred ---CH-----H--HhccC-------CHHHHHHCCcEEEeCCEEEEEE--CCCCEEEECCCCEEEeeEEEEccCCc
Confidence 00 0 00000 1123345789999999999984 34445677788899999999999953
No 129
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.32 E-value=3e-06 Score=90.08 Aligned_cols=139 Identities=19% Similarity=0.204 Sum_probs=73.0
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
++||+||| |++|+++|+.|++.|++|+|||+....++. +.+...-.-..+. ...++...+...+. ...+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~-~~~~g~~psk~l~-----~~~~~~~~~~~~~~--~~g~~~ 73 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGT-CLNVGCIPSKALL-----HATHLYHDAHANFA--RYGLMG 73 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH-HHHHSHHHHHHHH-----HHHHHHHHHHHTHH--HHTEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCc-CCCcCcHhHHHHH-----HHHHHHHHHHHHHH--hcCccc
Confidence 58999999 999999999999999999999998422221 1010000000110 00000000000000 000000
Q ss_pred cCcceeeeccccccC----HHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCC--eEEEcCeEEEccCCC
Q 009427 189 KGEIWVEDILNLGVS----PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNF 260 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~----~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G--~~i~a~lVV~AdG~~ 260 (535)
... ...+.....-. ...+...+.+.+.+.|++++.++.+. .+++.+.|.+.+| .++.+|.+|+|+|..
T Consensus 74 ~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~---i~~~~~~v~~~~G~~~~~~~d~lviAtG~~ 147 (468)
T 2qae_A 74 GEG-VTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSF---ETAHSIRVNGLDGKQEMLETKKTIIATGSE 147 (468)
T ss_dssp GGG-CEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEE---EETTEEEEEETTSCEEEEEEEEEEECCCEE
T ss_pred CCC-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---eeCCEEEEEecCCceEEEEcCEEEECCCCC
Confidence 000 00000000000 01223334455566789998887542 3567788877777 689999999999964
No 130
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.31 E-value=3.6e-06 Score=91.20 Aligned_cols=33 Identities=27% Similarity=0.432 Sum_probs=31.3
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
+||||||| ||+|..+|..+++.|.+|+|||+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 59999999 9999999999999999999999764
No 131
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.31 E-value=2.3e-06 Score=91.38 Aligned_cols=35 Identities=29% Similarity=0.443 Sum_probs=32.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLK 144 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~ 144 (535)
++||+||| |++|+++|+.|++.|++|+|||++.++
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~~G 46 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAKALG 46 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSCTT
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCCcC
Confidence 69999999 999999999999999999999998543
No 132
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.28 E-value=6.8e-06 Score=86.60 Aligned_cols=42 Identities=21% Similarity=0.150 Sum_probs=36.5
Q ss_pred CCCEEEeCceEEEEEEeCCe-EEEEEcCCeEEEcCeEEEccCCC
Q 009427 218 LGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 218 ~G~~i~~~~~V~~i~~~~~g-v~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
.|++|+.+++|++|..++++ +.|++ +|+++.||.||.|.+..
T Consensus 225 lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 225 LGDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPN 267 (453)
T ss_dssp HGGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGG
T ss_pred cCCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHH
Confidence 37889999999999988888 87776 67889999999999864
No 133
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.28 E-value=2e-06 Score=91.41 Aligned_cols=36 Identities=31% Similarity=0.444 Sum_probs=32.9
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKG 145 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~ 145 (535)
+|||+||| |++|+++|+.|+++|++|+|||+..+++
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~~GG 41 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFRYGG 41 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTTH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCCCC
Confidence 59999999 9999999999999999999999965443
No 134
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.27 E-value=2.7e-06 Score=95.91 Aligned_cols=42 Identities=14% Similarity=0.010 Sum_probs=37.7
Q ss_pred CCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 218 LGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 218 ~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
.|++|+.+++|++|..++++++|++.+|++++||.||.|...
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCH
Confidence 478999999999998888889999888888999999999963
No 135
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.27 E-value=1.8e-06 Score=92.01 Aligned_cols=36 Identities=36% Similarity=0.553 Sum_probs=33.2
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKG 145 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~ 145 (535)
+|||+||| |++|+++|+.|++.|++|+|||++.+++
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~GG 56 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGG 56 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC
Confidence 69999999 9999999999999999999999886543
No 136
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.26 E-value=2.3e-06 Score=90.63 Aligned_cols=108 Identities=16% Similarity=0.134 Sum_probs=68.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
.|||||| |++|+++|..|++. |.+|+|||+....+.... ++. ......+..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~--------------~~~------~~~~~~~~~------ 56 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSG--------------GLS------AYFNHTINE------ 56 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCc--------------cch------hhhcCCCCC------
Confidence 5899999 99999999999998 999999999853331110 000 000000000
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc-CCeEEEcCeEEEccCCC
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-EGKILSSHLIIDAMGNF 260 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~-~G~~i~a~lVV~AdG~~ 260 (535)
.... . ....+.+.+.|++++.+++|+++..+++.+.+... ++.++.+|.+|.|+|..
T Consensus 57 -~~~~------~---------~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~ 114 (452)
T 3oc4_A 57 -LHEA------R---------YITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGAS 114 (452)
T ss_dssp -----------C---------CCCHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCC
T ss_pred -HHHh------h---------cCCHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcc
Confidence 0000 0 00122334578999999999999766666666522 45679999999999974
No 137
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.26 E-value=3.2e-06 Score=90.70 Aligned_cols=133 Identities=11% Similarity=0.116 Sum_probs=72.9
Q ss_pred cccEEEEc-chHHHHHHHHHHHC---CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFK---GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~---G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~ 185 (535)
++|||||| |++|+++|+.|++. |++|+|||+..+++. +.+...-.-..+. ........+ ..+....+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~~GG~--~~~~g~~psk~l~-----~~a~~~~~~-~~~~~~g~~ 73 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGA--AVLDDCVPSKTFI-----ASTGLRTEL-RRAPHLGFH 73 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSCTTHH--HHHTSHHHHHHHH-----HHHHHHHHH-TTTTTTTBC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCCcCCc--ccCcCccchHHHH-----HHHHHHHHH-HHHHhCCCc
Confidence 48999999 99999999999999 999999999864332 1111100001110 000000000 111100000
Q ss_pred ccccCcceeeeccccccCHH-----------HHHHHHHHHHHhCCCEEEeCceEEEEEEe----CCeEEEEEcCCe--EE
Q 009427 186 FEGKGEIWVEDILNLGVSPA-----------KLIEIVKKRFISLGGVIFEGYSVSSICTY----ENAAVLLLAEGK--IL 248 (535)
Q Consensus 186 ~~~~~~~~~~~~~~~~v~~~-----------~l~~~L~~~a~~~G~~i~~~~~V~~i~~~----~~gv~v~~~~G~--~i 248 (535)
+... ...++.. .+...+.+.+.+.|++++.++ ++.+... ++.+.|...+|+ ++
T Consensus 74 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~ 143 (499)
T 1xdi_A 74 IDFD---------DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEH 143 (499)
T ss_dssp ---------------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEE
T ss_pred cccC---------CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEE
Confidence 0000 0001111 233345566677899999885 5554321 145666666675 79
Q ss_pred EcCeEEEccCCC
Q 009427 249 SSHLIIDAMGNF 260 (535)
Q Consensus 249 ~a~lVV~AdG~~ 260 (535)
.+|.+|+|+|..
T Consensus 144 ~~d~lviATGs~ 155 (499)
T 1xdi_A 144 EADVVLVATGAS 155 (499)
T ss_dssp EESEEEECCCEE
T ss_pred EeCEEEEcCCCC
Confidence 999999999964
No 138
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.25 E-value=4.3e-06 Score=89.27 Aligned_cols=33 Identities=33% Similarity=0.510 Sum_probs=30.9
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.+|||+||| |++|+++|+.|++.|++|+||||.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 369999999 999999999999999999999963
No 139
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.25 E-value=6.7e-06 Score=85.03 Aligned_cols=97 Identities=21% Similarity=0.275 Sum_probs=76.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-+|+||| |+.|+.+|..|++.|.+|+|+|+...... ..
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-----------------~~------------------------ 184 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP-----------------GL------------------------ 184 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----------------TT------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh-----------------cc------------------------
Confidence 4799999 99999999999999999999998731100 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
.+..+.+.+.+.+++.|++++.+++|++++.+++++.+.+.+|+++.+|.||.|+|..+
T Consensus 185 -------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 185 -------------LHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp -------------SCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred -------------cCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCc
Confidence 00122245666677789999999999999887778888888888899999999999643
No 140
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.25 E-value=1.4e-06 Score=92.31 Aligned_cols=33 Identities=30% Similarity=0.570 Sum_probs=31.2
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
+|||+||| |++|+++|..|++.|++|+|||+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC
Confidence 38999999 9999999999999999999999984
No 141
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.24 E-value=5.5e-06 Score=88.74 Aligned_cols=30 Identities=27% Similarity=0.481 Sum_probs=29.3
Q ss_pred cccEEEEc-chHHHHHHHHHHH-CCCcEEEEc
Q 009427 110 TFDVIVCG-GTLGIFIATALSF-KGLRVAIVE 139 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr-~G~~V~liE 139 (535)
+|||+||| |++|+++|+.|++ .|++|+|||
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 69999999 9999999999999 999999999
No 142
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.22 E-value=1.6e-06 Score=92.71 Aligned_cols=109 Identities=14% Similarity=0.076 Sum_probs=69.2
Q ss_pred cccEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
.+|||||| |++|+++|..|++. |.+|+|||+....+...+ .+..+ ....+. .
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~------~~~~~--------------~~~~~~-~---- 90 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC------GLPYV--------------ISGAIA-S---- 90 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG------GHHHH--------------HTTSSS-C----
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC------Ccchh--------------hcCCcC-C----
Confidence 47999999 99999999999996 999999999854322111 00000 000000 0
Q ss_pred cccCcceeeeccccccCHHHHHHHHHHHH-HhCCCEEEeCceEEEEEEeCCeEEEEE-cCCe--EEEcCeEEEccCCC
Q 009427 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRF-ISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNF 260 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~v~~~~l~~~L~~~a-~~~G~~i~~~~~V~~i~~~~~gv~v~~-~~G~--~i~a~lVV~AdG~~ 260 (535)
..... . ...+.+ .+.|++++.+++|+.+..+++.+.+.. .+|+ ++.+|.+|+|+|..
T Consensus 91 --~~~l~-----~----------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 91 --TEKLI-----A----------RNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVR 151 (480)
T ss_dssp --GGGGB-----S----------SCHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred --HHHhh-----h----------cCHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCc
Confidence 00000 0 011222 234899999999999876566666654 3465 79999999999964
No 143
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.22 E-value=7e-06 Score=87.24 Aligned_cols=35 Identities=37% Similarity=0.586 Sum_probs=32.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLK 144 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~ 144 (535)
++||+||| |++|+++|..|++.|++|+|||++.++
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~G 39 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKALG 39 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCCCC
Confidence 69999999 999999999999999999999998543
No 144
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.21 E-value=1.4e-06 Score=91.81 Aligned_cols=105 Identities=17% Similarity=0.146 Sum_probs=68.6
Q ss_pred cccEEEEc-chHHHHHHHHHHH---CCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr---~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~ 185 (535)
..|||||| |++|+++|..|++ .|++|+|||+.+... +.. .+..+ ..|. +.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~----~~~---~~~~~-~~g~-------------~~----- 57 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ----FVP---SNPWV-GVGW-------------KE----- 57 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE----CGG---GHHHH-HHTS-------------SC-----
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc----ccC---Ccccc-ccCc-------------cC-----
Confidence 46999999 9999999999999 899999999984211 100 00000 0010 00
Q ss_pred ccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 186 FEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 186 ~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
...+...+.+.+.+.|++++ ..+|++++.+++ .|++++|+++.+|.||+|+|..+
T Consensus 58 ------------------~~~~~~~l~~~~~~~gv~~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 58 ------------------RDDIAFPIRHYVERKGIHFI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp ------------------HHHHEEECHHHHHTTTCEEE-CSCEEEEETTTT--EEEETTSCEEECSEEEECCCCEE
T ss_pred ------------------HHHHHHHHHHHHHHCCCEEE-EeEEEEEEcCCC--EEEECCCCEEECCEEEECCCCCc
Confidence 01111113344456789987 468998854333 56777888899999999999754
No 145
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.21 E-value=4.5e-06 Score=89.28 Aligned_cols=33 Identities=30% Similarity=0.486 Sum_probs=31.2
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.+|||+||| |++|+++|+.|++.|++|+||||.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 369999999 999999999999999999999974
No 146
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.21 E-value=5.4e-06 Score=88.11 Aligned_cols=35 Identities=37% Similarity=0.504 Sum_probs=32.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLK 144 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~ 144 (535)
++||+||| |++|+++|..|++.|++|+|||+..++
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~~G 41 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVG 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 58999999 999999999999999999999998643
No 147
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=1.1e-06 Score=90.70 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=65.8
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
.||+||| |++|+++|..|++.| +|+|||+.......+ ..+... +.....+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~------~~l~~~--------------~~g~~~~-------- 59 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSK------PMLSHY--------------IAGFIPR-------- 59 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCS------TTHHHH--------------HTTSSCG--------
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCcccc------chhHHH--------------HhCCCCH--------
Confidence 5999999 999999999999999 999999985432111 001000 0000000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
.... . . ..+.+.+.|++++.+++|+.+.. +...|. .+|+++.+|.+|+|+|..
T Consensus 60 ~~~~-----~---~-------~~~~~~~~~v~~~~g~~v~~id~--~~~~V~-~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 60 NRLF-----P---Y-------SLDWYRKRGIEIRLAEEAKLIDR--GRKVVI-TEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp GGGC-----S---S-------CHHHHHHHTEEEECSCCEEEEET--TTTEEE-ESSCEEECSEEEECCCEE
T ss_pred HHhc-----c---C-------CHHHHHhCCcEEEECCEEEEEEC--CCCEEE-ECCcEEECCEEEECCCCC
Confidence 0000 0 0 11122345899999999998853 334455 577889999999999963
No 148
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.20 E-value=4e-06 Score=88.62 Aligned_cols=106 Identities=18% Similarity=0.139 Sum_probs=66.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
.+||+||| |++|+++|..|++. |++|+|||+....+... . ++. . +..+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~------~--------~~p------~-----~~~~~~-- 55 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP------C--------GIP------Y-----VVEGLS-- 55 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC------c--------CCc------c-----ccCCCC--
Confidence 47999999 99999999999998 88999999985322100 0 110 0 000000
Q ss_pred cccCcceeeeccccccCHHHHHHHHHHHH-HhCCCEEEeCceEEEEEEeCCeEEEEEcCC-eEEEcCeEEEccCCC
Q 009427 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRF-ISLGGVIFEGYSVSSICTYENAAVLLLAEG-KILSSHLIIDAMGNF 260 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~v~~~~l~~~L~~~a-~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G-~~i~a~lVV~AdG~~ 260 (535)
+...+.....+.+ .+.|++++.+++|+++ +.+...+.+.++ .++.+|.||.|+|..
T Consensus 56 ----------------~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i--~~~~~~v~~~~g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 56 ----------------TPDKLMYYPPEVFIKKRGIDLHLNAEVIEV--DTGYVRVRENGGEKSYEWDYLVFANGAS 113 (449)
T ss_dssp --------------------------CTHHHHTTCEEETTCEEEEE--CSSEEEEECSSSEEEEECSEEEECCCEE
T ss_pred ----------------CHHHhhhcCHHHHHHhcCcEEEecCEEEEE--ecCCCEEEECCceEEEEcCEEEECCCCC
Confidence 0000111111222 4578999999999987 445666777666 479999999999953
No 149
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.19 E-value=3e-06 Score=89.69 Aligned_cols=110 Identities=14% Similarity=0.057 Sum_probs=68.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
+|||||| |++|+++|..|++. |.+|+|||+....+... ..+... ....+. ...
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~------~~~~~~--------------~~g~~~--~~~-- 56 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLS------CGIALY--------------LGKEIK--NND-- 56 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCG------GGHHHH--------------HTTCBG--GGC--
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccc------ccchhh--------------hcCCcc--cCC--
Confidence 5899999 99999999999998 99999999985322110 000000 000000 000
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc-C--CeEEEcCeEEEccCCC
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-E--GKILSSHLIIDAMGNF 260 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~-~--G~~i~a~lVV~AdG~~ 260 (535)
.... .. .+.+.+.+.|++++.+++|+.+..+++.+.+... + +.++++|.+|+|+|..
T Consensus 57 -~~~~------~~---------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~ 116 (452)
T 2cdu_A 57 -PRGL------FY---------SSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSK 116 (452)
T ss_dssp -GGGG------BS---------CCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -HHHh------hh---------cCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCC
Confidence 0000 00 0122334578999999999998655566655431 2 4579999999999964
No 150
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.18 E-value=8.6e-06 Score=84.48 Aligned_cols=105 Identities=16% Similarity=0.168 Sum_probs=69.9
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
+..|+||| |++|+++|..|++.+.+|+|||+.+..+..+. .+... +.....+.
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~------~l~~~--------------l~g~~~~~------ 62 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRP------RLNEI--------------IAKNKSID------ 62 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGG------GHHHH--------------HHSCCCGG------
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccC------hhhHH--------------HcCCCCHH------
Confidence 57899999 99999999999888999999999853321110 11111 11000000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
+.. . ...+.+.+.|++++.+++|++++.++ ..|++++|+++.+|.||.|+|.
T Consensus 63 --~l~--------~-------~~~~~~~~~~i~~~~~~~V~~id~~~--~~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 63 --DIL--------I-------KKNDWYEKNNIKVITSEFATSIDPNN--KLVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp --GTB--------S-------SCHHHHHHTTCEEECSCCEEEEETTT--TEEEETTSCEEECSEEEECCCE
T ss_pred --Hcc--------C-------CCHHHHHHCCCEEEeCCEEEEEECCC--CEEEECCCCEEECCEEEEecCC
Confidence 000 0 01122346799999999999985443 3567778889999999999996
No 151
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.15 E-value=1.3e-06 Score=93.57 Aligned_cols=108 Identities=14% Similarity=0.144 Sum_probs=68.8
Q ss_pred cccEEEEc-chHHHHHHHHHHHCC---CcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKG---LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G---~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~ 185 (535)
++|||||| |++|+++|..|++.| .+|+|||+....+...+ .+.. .....+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~------~~~~--------------~~~~~~~~---- 90 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGA------GMAL--------------WIGEQIAG---- 90 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGG------GHHH--------------HHTTSSSC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCcccc------ccch--------------hhcCccCC----
Confidence 48999999 999999999999998 99999999852221100 0000 00000000
Q ss_pred ccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcC--CeEEEcCeEEEccCCC
Q 009427 186 FEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE--GKILSSHLIIDAMGNF 260 (535)
Q Consensus 186 ~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~--G~~i~a~lVV~AdG~~ 260 (535)
..... .. +.+.+.+.|++++.+++|+.+..+++.+.+.. + +.++.+|.||+|+|..
T Consensus 91 ---~~~~~------~~---------~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~-~g~~~~~~~d~lviAtG~~ 148 (490)
T 2bc0_A 91 ---PEGLF------YS---------DKEELESLGAKVYMESPVQSIDYDAKTVTALV-DGKNHVETYDKLIFATGSQ 148 (490)
T ss_dssp ---SGGGB------SC---------CHHHHHHTTCEEETTCCEEEEETTTTEEEEEE-TTEEEEEECSEEEECCCEE
T ss_pred ---HHHhh------hc---------CHHHHHhCCCEEEeCCEEEEEECCCCEEEEEe-CCcEEEEECCEEEECCCCC
Confidence 00000 00 12233457899999999999865555555542 3 3579999999999964
No 152
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.15 E-value=2.5e-05 Score=85.28 Aligned_cols=35 Identities=34% Similarity=0.458 Sum_probs=32.1
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCC-CcEEEEcccCC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKG-LRVAIVERNTL 143 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G-~~V~liEr~~~ 143 (535)
.+||+|||| |.+|+++|..|++.| .+|+|||++..
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 369999999 999999999999998 79999999854
No 153
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.15 E-value=2.4e-06 Score=90.24 Aligned_cols=108 Identities=15% Similarity=0.137 Sum_probs=68.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
.|||||| |++|+++|..|++. |.+|+|||+....+... ..+.. .....+. .
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~------~~~~~--------------~~~~~~~-~----- 54 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLS------AGMQL--------------YLEGKVK-D----- 54 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCG------GGHHH--------------HHTTSSC-C-----
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCccc------ccchh--------------hhcCccC-C-----
Confidence 3899999 99999999999998 99999999985322110 00000 0000000 0
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEE-cCCe--EEEcCeEEEccCCC
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNF 260 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~-~~G~--~i~a~lVV~AdG~~ 260 (535)
..+.. . .+.+.+.+.|++++.+++|+.+..+++.+.+.. .+|+ ++++|.+|+|+|..
T Consensus 55 -~~~~~-----~----------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 55 -VNSVR-----Y----------MTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAV 114 (447)
T ss_dssp -GGGSB-----S----------CCHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -HHHhh-----c----------CCHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCC
Confidence 00000 0 011233456899999999999866556565554 3354 48999999999964
No 154
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.15 E-value=3.4e-06 Score=87.88 Aligned_cols=104 Identities=19% Similarity=0.223 Sum_probs=66.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC--cEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL--RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
.|||||| |++|+++|..|+++|+ +|+|||+.+.....+. .+ ...+-.....
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~--------------~l----------~~~~l~~~~~-- 55 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRP--------------PL----------SKAYLKSGGD-- 55 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSG--------------GG----------GTGGGGSCCC--
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCc--------------cC----------CHHHHCCCCC--
Confidence 4899999 9999999999999999 8999999853221110 00 0000000000
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
... .... ..+.+.+.+++++. ++|+.+..+ ...+.+.+|.++.+|.+|.|+|.
T Consensus 56 -~~~--------~~~~-------~~~~~~~~~i~~~~-~~v~~id~~--~~~v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 56 -PNS--------LMFR-------PEKFFQDQAIELIS-DRMVSIDRE--GRKLLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp -TTS--------SBSS-------CHHHHHHTTEEEEC-CCEEEEETT--TTEEEESSSCEEECSEEEECCCE
T ss_pred -HHH--------ccCC-------CHHHHHhCCCEEEE-EEEEEEECC--CCEEEECCCCEEECCEEEEeeCC
Confidence 000 0000 11233456889888 899998543 33566778889999999999996
No 155
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.14 E-value=1.1e-05 Score=85.42 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=32.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLK 144 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~ 144 (535)
++||+||| |++|+++|..|++.|++|+|||+..++
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~G 40 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQALG 40 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCCCC
Confidence 59999999 999999999999999999999996544
No 156
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.14 E-value=1.4e-05 Score=86.37 Aligned_cols=34 Identities=35% Similarity=0.454 Sum_probs=32.3
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.++|||||| |++|+++|+.|++.|++|+|||++.
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 369999999 9999999999999999999999986
No 157
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.13 E-value=1.6e-05 Score=85.34 Aligned_cols=57 Identities=9% Similarity=0.050 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCC--------eEEEEEcCC-----eEEEcCeEEEccCC
Q 009427 203 SPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN--------AAVLLLAEG-----KILSSHLIIDAMGN 259 (535)
Q Consensus 203 ~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~--------gv~v~~~~G-----~~i~a~lVV~AdG~ 259 (535)
.+..+.+.|...|.+.+..+.++++|++++..++ .++|++.++ .++.|+.||.|+|.
T Consensus 143 ~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 143 ARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp BHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 4567778888888777778999999999976542 377777543 46899999999994
No 158
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.13 E-value=3.8e-06 Score=90.17 Aligned_cols=35 Identities=34% Similarity=0.543 Sum_probs=32.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLK 144 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~ 144 (535)
+|||+||| |++|+++|..|++.|++|+|||+..++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~G 37 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSRLG 37 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTT
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCcC
Confidence 48999999 999999999999999999999998643
No 159
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.12 E-value=2.4e-06 Score=89.36 Aligned_cols=105 Identities=17% Similarity=0.245 Sum_probs=69.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCc--EEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLR--VAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~--V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
.||+||| |++|+++|..|+++|++ |+|||+.+..+..+. .++ .........+..+ +
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~-~l~------------------~~~~~g~~~~~~~-~- 61 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRP-SLS------------------KAVLDGSLERPPI-L- 61 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSG-GGG------------------THHHHTSSSSCCB-S-
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCc-ccc------------------HHHhCCCCCHHHh-c-
Confidence 4899999 99999999999999988 999999853322110 000 0001101111111 0
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
. . .+.+.+.+++++.+++|+.+.. +...|.+.+|+++.+|.+|.|+|..
T Consensus 62 --------~-------~-------~~~~~~~~i~~~~~~~v~~id~--~~~~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 62 --------A-------E-------ADWYGEARIDMLTGPEVTALDV--QTRTISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp --------S-------C-------TTHHHHTTCEEEESCCEEEEET--TTTEEEETTSCEEECSEEEECCCEE
T ss_pred --------C-------C-------HHHHHHCCCEEEeCCEEEEEEC--CCCEEEECCCCEEECCEEEEccCCc
Confidence 0 0 0122356899999999999853 3345677788899999999999964
No 160
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.11 E-value=4.9e-07 Score=97.00 Aligned_cols=36 Identities=25% Similarity=0.299 Sum_probs=33.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKG 145 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~ 145 (535)
+|||+||| |++|+++|..|++.|++|+|||++.+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~~GG 44 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGAYGT 44 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSCSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 59999999 9999999999999999999999987554
No 161
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.10 E-value=1.4e-05 Score=87.41 Aligned_cols=109 Identities=15% Similarity=0.085 Sum_probs=70.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
..||+||| |++|+++|..|++. |++|+|||+....+... . ++ ...+...+.+.
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~------~--------~l------p~~~~g~~~~~---- 91 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFAN------C--------GL------PYYIGGVITER---- 91 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCG------G--------GH------HHHHTTSSCCG----
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccC------C--------CC------chhhcCcCCCh----
Confidence 57999999 99999999999998 89999999985332111 0 00 00010000000
Q ss_pred cccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEE-cCCe--EEEcCeEEEccCC
Q 009427 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGN 259 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~-~~G~--~i~a~lVV~AdG~ 259 (535)
.... ...+...+.+.|+.++.+++|+++..+++.+.+.. .+|. ++.+|.+|.|+|.
T Consensus 92 ---~~~~--------------~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 92 ---QKLL--------------VQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp ---GGGB--------------SSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred ---HHhh--------------ccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCC
Confidence 0000 01122333456899999999999976666666654 3454 7899999999996
No 162
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.10 E-value=1.5e-05 Score=84.35 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=32.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLK 144 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~ 144 (535)
++||+||| |++|+++|..|++.|++|+|||++.++
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~G 39 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELG 39 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCCCC
Confidence 69999999 999999999999999999999998543
No 163
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.09 E-value=2.6e-06 Score=88.80 Aligned_cols=104 Identities=14% Similarity=0.092 Sum_probs=65.2
Q ss_pred ccEEEEc-chHHHHHHHHHHH---CCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 111 FDVIVCG-GTLGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr---~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
.|||||| |++|+++|..|++ .|++|+|||++....... .+ . .......
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~---------------~~-~----------~~~~~~~-- 53 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRP---------------AL-P----------HVAIGVR-- 53 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECC---------------SS-C----------CCCSSCC--
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceecc---------------ch-h----------hcccCCc--
Confidence 3799999 9999999999999 899999999984211000 00 0 0000000
Q ss_pred cccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCe----EEEcCeEEEccCCCh
Q 009427 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK----ILSSHLIIDAMGNFS 261 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~----~i~a~lVV~AdG~~S 261 (535)
...+ +. ..+.+.+.+.|++++.+ +|+++..++..+ .+.++. ++.+|.||.|+|...
T Consensus 54 -~~~~--------~~-------~~~~~~~~~~gv~~~~~-~v~~i~~~~~~V--~~~~g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 54 -DVDE--------LK-------VDLSEALPEKGIQFQEG-TVEKIDAKSSMV--YYTKPDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp -CCCC--------EE-------EEHHHHTGGGTCEEEEC-EEEEEETTTTEE--EEECTTSCEEEEECSEEEECCCCEE
T ss_pred -CHHH--------HH-------HHHHHHHhhCCeEEEEe-eEEEEeCCCCEE--EEccCCcccceeeCCEEEECCCCCc
Confidence 0000 00 12344455678998877 898886544444 443442 499999999999853
No 164
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.07 E-value=2.7e-05 Score=82.30 Aligned_cols=95 Identities=20% Similarity=0.264 Sum_probs=74.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |++|+.+|..|++.|.+|+|+|+.+.... +. +
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~-----------------~~-~---------------------- 207 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP-----------------TM-D---------------------- 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----------------TS-C----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc-----------------cc-C----------------------
Confidence 4799999 99999999999999999999998731000 00 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
..+.+.+.+.+.+.|++++.+++|++++.+++++.+++++|+++.+|.||.|+|..
T Consensus 208 ---------------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 208 ---------------LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp ---------------HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred ---------------HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCC
Confidence 11223455556667999999999999988777888888778889999999999954
No 165
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.06 E-value=1.9e-05 Score=88.19 Aligned_cols=50 Identities=10% Similarity=0.149 Sum_probs=39.2
Q ss_pred HHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc---CCeEEEcCeEEEccCC
Q 009427 208 IEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGN 259 (535)
Q Consensus 208 ~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~---~G~~i~a~lVV~AdG~ 259 (535)
...+.+.+.+.|++++.+++|++++ ++++.+... +++++.+|.||.|+|.
T Consensus 570 ~~~l~~~l~~~GV~i~~~~~V~~i~--~~~~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 570 VNRIQRRLIENGVARVTDHAVVAVG--AGGVTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEE--TTEEEEEETTTCCEEEEECSEEEEESCE
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEE--CCeEEEEEccCCeEEEEECCEEEECCCC
Confidence 4566777788899999999999984 556665532 3467999999999994
No 166
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.04 E-value=6.2e-06 Score=88.40 Aligned_cols=108 Identities=20% Similarity=0.241 Sum_probs=71.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
.+||+||| |++|+++|+.|++. ++|+|||+.+..++.... . ......+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~--------------------------~--~~~~~g~-- 156 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL--------------------------K--GIKQEGF-- 156 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG--------------------------T--CSEETTT--
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec--------------------------c--ccccCCC--
Confidence 58999999 99999999999999 999999998543321000 0 0000000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEE-cCCe--EEEcCeEEEccCCCh
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNFS 261 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~-~~G~--~i~a~lVV~AdG~~S 261 (535)
. . +...+...+.+.+ +.+++++.+++|.++..+++.+.+.. .+++ ++.+|.+|.|+|+..
T Consensus 157 ~----------~--~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 157 N----------K--DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp T----------E--EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred C----------C--CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 0 0 1233344444444 56889999999999877665555443 3453 689999999999643
No 167
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.04 E-value=8.9e-06 Score=86.54 Aligned_cols=115 Identities=14% Similarity=0.084 Sum_probs=61.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
..||+||| |++|+++|..|+++ |++|+|||+....+... .|+.. .+...+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~--------------~gl~~------~~~g~~~~----- 57 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGG--------------CGIPY------YVSGEVSN----- 57 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccc--------------cccch------hhcCCCCc-----
Confidence 36999999 99999999999999 99999999984322110 01100 00000000
Q ss_pred cccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEE-cCCe--EEEcCeEEEccCC
Q 009427 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGN 259 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~-~~G~--~i~a~lVV~AdG~ 259 (535)
..... .+ +..+...+...+.+.|++++.+++|+++..++..+.+.. .+|. ++.+|.+|.|+|.
T Consensus 58 --~~~~~-----~~---~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 58 --IESLQ-----AT---PYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ---------------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred --hHHhc-----cc---cchhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCC
Confidence 00000 00 000111111122246889999999999976666666554 2354 7999999999996
No 168
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.03 E-value=7.6e-05 Score=81.78 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=31.0
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|||+||| ||+|+++|..|++.|++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 369999999 999999999999999999999984
No 169
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.03 E-value=4.4e-05 Score=81.02 Aligned_cols=94 Identities=13% Similarity=0.133 Sum_probs=72.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |++|+.+|..|++.|.+|+|+|+.+.... . ++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-~~---------------------- 209 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-----------------Q-GD---------------------- 209 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------------T-SC----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-----------------c-cC----------------------
Confidence 4799999 99999999999999999999998731100 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc-C--Ce--EEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-E--GK--ILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~-~--G~--~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|++++.+++++.+.+. + |+ ++.+|.||.|+|.
T Consensus 210 ---------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 210 ---------------PETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCc
Confidence 112244556667789999999999999877777777765 5 75 8999999999995
No 170
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.02 E-value=1.2e-05 Score=83.98 Aligned_cols=104 Identities=17% Similarity=0.195 Sum_probs=68.2
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCC--cEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGL--RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
.+||+||| |++|+++|..|++.|. +|+|||+.......+. ..+ . ..+.... +.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-~~~--------------~----~~~~~~~-~~---- 62 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRP-PLS--------------K----DFMAHGD-AE---- 62 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSG-GGG--------------T----HHHHHCC-GG----
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCC-CCC--------------H----HHhCCCc-hh----
Confidence 58999999 9999999999999998 4999999743221100 000 0 0000000 00
Q ss_pred cccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
..+ +. .+.+.|++++.+++|+.+.. +...|.+.+|+++.+|.+|+|+|...
T Consensus 63 ----~~~--------~~----------~~~~~~v~~~~~~~v~~i~~--~~~~v~~~~g~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 63 ----KIR--------LD----------CKRAPEVEWLLGVTAQSFDP--QAHTVALSDGRTLPYGTLVLATGAAP 113 (408)
T ss_dssp ----GSB--------CC----------CTTSCSCEEEETCCEEEEET--TTTEEEETTSCEEECSEEEECCCEEE
T ss_pred ----hhh--------HH----------HHHHCCCEEEcCCEEEEEEC--CCCEEEECCCCEEECCEEEECCCCCC
Confidence 000 00 12356899999999999854 33456677788899999999999743
No 171
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.02 E-value=9.6e-06 Score=86.95 Aligned_cols=31 Identities=35% Similarity=0.537 Sum_probs=29.7
Q ss_pred CcccEEEEc-chHHHHHHHHHHH-CCCcEEEEc
Q 009427 109 GTFDVIVCG-GTLGIFIATALSF-KGLRVAIVE 139 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr-~G~~V~liE 139 (535)
.++||+||| |++|+++|+.|++ .|++|+|||
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 38 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVD 38 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEe
Confidence 369999999 9999999999999 999999999
No 172
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.01 E-value=1e-05 Score=85.06 Aligned_cols=104 Identities=17% Similarity=0.114 Sum_probs=65.9
Q ss_pred ccEEEEc-chHHHHHHHHHHH--CCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSF--KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr--~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
.|||||| |++|+++|..|++ .|++|+|||+.+.... ... +..+ ....+.+..+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~----~~~---~~~~--------------~~g~~~~~~~--- 58 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF----TPA---FPHL--------------AMGWRKFEDI--- 58 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC----GGG---HHHH--------------HHTCSCGGGS---
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCc----CCC---cchh--------------ccCccCHHHH---
Confidence 5899999 9999999999999 8999999999842211 000 0000 0000111100
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
. .. +.+.+.+.|++++. .+|+.++.+ ...|.++++.++.+|.+|.|+|...
T Consensus 59 -----~-~~--------------~~~~~~~~gv~~~~-~~v~~id~~--~~~v~~~~g~~i~~d~liiAtG~~~ 109 (430)
T 3h28_A 59 -----S-VP--------------LAPLLPKFNIEFIN-EKAESIDPD--ANTVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp -----E-EE--------------STTTGGGGTEEEEC-SCEEEEETT--TTEEEETTCCEEECSEEEECCCCEE
T ss_pred -----H-HH--------------HHHHHHhcCCEEEE-EEEEEEECC--CCEEEECCCcEEECCEEEEcCCccc
Confidence 0 00 11123345888886 488888543 3356677788899999999999753
No 173
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.98 E-value=1.6e-05 Score=86.38 Aligned_cols=109 Identities=10% Similarity=0.019 Sum_probs=68.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 187 (535)
.||+||| |++|+++|..|++. |++|+|||+....+.... ++ ...+...+.+.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~--------------~l------~~~~~~~~~~~----- 56 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANC--------------GL------PYHISGEIAQR----- 56 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG--------------GH------HHHHTSSSCCG-----
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccccc--------------Cc------hHHhcCCcCCh-----
Confidence 4899999 99999999999998 899999999854321110 00 00010001100
Q ss_pred ccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEE-cCC--eEEEcCeEEEccCCC
Q 009427 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEG--KILSSHLIIDAMGNF 260 (535)
Q Consensus 188 ~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~-~~G--~~i~a~lVV~AdG~~ 260 (535)
..... +.+...+.+.|++++.+++|+++..+.+.+.+.. .+| .++.+|.||+|+|..
T Consensus 57 --~~~~~--------------~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 57 --SALVL--------------QTPESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp --GGGBC--------------CCHHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred --HHhhc--------------cCHHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCC
Confidence 00000 0011112335899999999999976666666654 224 379999999999963
No 174
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.96 E-value=4.2e-05 Score=78.75 Aligned_cols=32 Identities=31% Similarity=0.233 Sum_probs=30.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
+||+||| |++|+.+|+.|+++|++|+|+|+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 6999999 9999999999999999999999875
No 175
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.95 E-value=1.5e-05 Score=82.25 Aligned_cols=106 Identities=15% Similarity=0.162 Sum_probs=65.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCC--CcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKG--LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G--~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
++|||||| |++|+++|..|++.| .+|+|+|++. + ..+. ... + ...+...
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g--~~~~--~~~---l---------------~~~~~~~---- 55 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--G--RSYS--KPM---L---------------STGFSKN---- 55 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--C--CEEC--GGG---G---------------GGTTTTT----
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--C--CccC--ccc---c---------------cHHHhCC----
Confidence 58999999 999999999999999 5689999873 1 1110 000 0 0000000
Q ss_pred cccCcceeeeccccccCHHHHHH-HHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 187 EGKGEIWVEDILNLGVSPAKLIE-IVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~v~~~~l~~-~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
.....+.. .+.+.+.+.|++++.+++|+.+..++. .|.+. +.++.+|.+|+|+|...
T Consensus 56 ---------------~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~-~~~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 56 ---------------KDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQ--RIWIG-EEEVRYRDLVLAWGAEP 113 (384)
T ss_dssp ---------------CCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGT--EEEET-TEEEECSEEEECCCEEE
T ss_pred ---------------CCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCC--EEEEC-CcEEECCEEEEeCCCCc
Confidence 00011101 122233467899998999888854333 45553 45799999999999643
No 176
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.93 E-value=8e-05 Score=79.02 Aligned_cols=94 Identities=19% Similarity=0.190 Sum_probs=73.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+|+|+....-. . ++
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-----------------~-~~---------------------- 206 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-----------------Q-FD---------------------- 206 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------------T-SC----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-----------------c-cC----------------------
Confidence 3799999 99999999999999999999998721000 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCe-EEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK-ILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~-~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|+++..+++++.+.+.+|+ ++.+|.||.|+|.
T Consensus 207 ---------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 207 ---------------PLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCC
Confidence 011133555667789999999999999877777888888888 8999999999995
No 177
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.93 E-value=8.5e-05 Score=77.21 Aligned_cols=95 Identities=22% Similarity=0.350 Sum_probs=74.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++|+.+.... ..+
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~-----------------~~~----------------------- 182 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA-----------------RVV----------------------- 182 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-----------------TTS-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh-----------------hcc-----------------------
Confidence 4699999 99999999999999999999998731100 000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE-EEEcCCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~-v~~~~G~~i~a~lVV~AdG~ 259 (535)
...+.+.+.+.+++.|++++.+++|+++..+++.+. |.+++|+++.||.||.|+|.
T Consensus 183 --------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 183 --------------TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp --------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred --------------CHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 012224566677788999999999999987766653 77888989999999999995
No 178
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.92 E-value=6.4e-05 Score=79.45 Aligned_cols=94 Identities=16% Similarity=0.185 Sum_probs=72.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+|+|+.+.... . ++
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-~~---------------------- 207 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-----------------S-FD---------------------- 207 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------------T-SC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-----------------h-hh----------------------
Confidence 3799999 99999999999999999999998731000 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe-EEEEEcCCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g-v~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|++++.++++ +.+.+.+|+++.+|.||.|+|.
T Consensus 208 ---------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 208 ---------------PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp ---------------HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCC
Confidence 012234555666779999999999999766544 6778888888999999999995
No 179
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.92 E-value=0.00024 Score=77.53 Aligned_cols=34 Identities=29% Similarity=0.506 Sum_probs=31.5
Q ss_pred CcccEEEEc-chHHHHHHHHHHHC-CCcEEEEcccC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFK-GLRVAIVERNT 142 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~-G~~V~liEr~~ 142 (535)
.+||+|||| |.+|+++|..|++. |.+|+|||++.
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 479999999 99999999999975 89999999986
No 180
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.90 E-value=8.8e-05 Score=77.34 Aligned_cols=96 Identities=18% Similarity=0.247 Sum_probs=73.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++|+.+..-. ..+
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~-----------------~~~----------------------- 192 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA-----------------RVA----------------------- 192 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-----------------TTS-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh-----------------hhc-----------------------
Confidence 3699999 99999999999999999999998731100 000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeE-EEEEcCCeEEEcCeEEEccCCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv-~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
...+.+.+.+.+++.|++++.+++|+++..+++.+ .|.+++|+++.||.||.|+|..
T Consensus 193 --------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 193 --------------GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp --------------CHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCE
T ss_pred --------------CHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 01122455666778899999999999997765555 5777889899999999999953
No 181
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.87 E-value=0.00011 Score=77.56 Aligned_cols=94 Identities=22% Similarity=0.310 Sum_probs=71.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-+|+||| |+.|+-+|..|++.|.+|+|+|+.+.... ++ +
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~~-~---------------------- 210 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-----------------GF-E---------------------- 210 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----------------TS-C----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-----------------cc-C----------------------
Confidence 4799999 99999999999999999999998721000 00 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc---CCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~---~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|++++.+++++.+++. +++++.+|.||.|+|.
T Consensus 211 ---------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~ 268 (455)
T 1ebd_A 211 ---------------KQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGR 268 (455)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCC
Confidence 012244556667789999999999999877777777664 3567999999999995
No 182
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.86 E-value=1.2e-05 Score=85.24 Aligned_cols=57 Identities=11% Similarity=0.062 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEEe--CCeEE-EEEcCCeEEEcCeEEEccCCChH
Q 009427 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTY--ENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (535)
Q Consensus 205 ~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~--~~gv~-v~~~~G~~i~a~lVV~AdG~~S~ 262 (535)
..+.+.|.+.+.+.|++++.+++|++|..+ +++++ |.+ +|+++.||.||.|.|.++.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 467888999999999999999999999887 66543 455 6888999999999998864
No 183
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.85 E-value=2.3e-05 Score=82.38 Aligned_cols=102 Identities=19% Similarity=0.214 Sum_probs=63.9
Q ss_pred cEEEEc-chHHHHHHHHHHHCC--CcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKG--LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G--~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
.||||| |++|+++|..|++.+ ++|+|||+.+.-. + .+ .+..+ -.|. +.+..+.+
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~----~--~p-~l~~v-~~g~-------------~~~~~i~~-- 60 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG----F--TP-AFPHL-AMGW-------------RKFEDISV-- 60 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE----C--GG-GHHHH-HHTC-------------SCGGGSEE--
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc----c--Cc-cHHHH-hcCC-------------CCHHHhhh--
Confidence 599999 999999999999876 7999999874211 1 00 01111 0021 11111100
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
+. .+.+.+.|++++.+ +|++|+ .+.-+|++++|+++..|++|+|+|+.
T Consensus 61 -------~~--------------~~~~~~~gv~~i~~-~v~~Id--~~~~~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 61 -------PL--------------APLLPKFNIEFINE-KAESID--PDANTVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp -------ES--------------TTTGGGGTEEEECS-CEEEEE--TTTTEEEETTCCEEECSEEEECCCCE
T ss_pred -------cH--------------HHHHHHCCcEEEEe-EEEEEE--CCCCEEEECCCCEEECCEEEEeCCCC
Confidence 00 01123457887755 788884 44446777889899999999999974
No 184
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.83 E-value=8.2e-06 Score=87.20 Aligned_cols=53 Identities=11% Similarity=0.114 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 205 ~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.|.+.+.+.|++++.+++|++|..+++. +++.+|+++.||.||.+.-.
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCH
Confidence 457777887777889999999999999755443 45678999999999988653
No 185
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.83 E-value=1.8e-05 Score=84.74 Aligned_cols=128 Identities=18% Similarity=0.261 Sum_probs=70.5
Q ss_pred CcccEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHh-hhcCCC--
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATA-TKFNPN-- 182 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~-~~~~~~-- 182 (535)
..+|||||| |++|+++|..|++. |.+|+|||+.+..+..+. ..+. .+. .+. ......... ..+...
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~-~lsk----~l~-~~~--~~~~~~~~~~~~~~~~~~ 81 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRP-PLSK----ELW-FSD--DPNVTKTLRFKQWNGKER 81 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSG-GGGT----GGG-CC----CTHHHHCEEECTTSCEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCC-CCCH----Hhh-cCC--ccchhhcccccccccccc
Confidence 369999999 99999999999887 899999999853222111 0000 000 000 000000000 001000
Q ss_pred cccccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 183 RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
.+.+. ....+ .+... +. ++.+.|++++.+++|+++..++ .+|.+++|+++.+|.||+|+|..
T Consensus 82 ~~~~~-~~~~~--------~~~~~----l~-~~~~~gv~~~~g~~v~~id~~~--~~V~~~~g~~i~yd~lviATGs~ 143 (493)
T 1m6i_A 82 SIYFQ-PPSFY--------VSAQD----LP-HIENGGVAVLTGKKVVQLDVRD--NMVKLNDGSQITYEKCLIATGGT 143 (493)
T ss_dssp ESBSS-CGGGS--------BCTTT----TT-TSTTCEEEEEETCCEEEEEGGG--TEEEETTSCEEEEEEEEECCCEE
T ss_pred ccccc-chHhh--------cchhh----hh-hhhcCCeEEEcCCEEEEEECCC--CEEEECCCCEEECCEEEECCCCC
Confidence 00000 00000 01000 11 1234688999999999986443 35667788889999999999964
No 186
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.83 E-value=4.2e-05 Score=88.54 Aligned_cols=33 Identities=33% Similarity=0.523 Sum_probs=31.5
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
++|||||| ||+|+++|..|++.|++|+|||+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~ 161 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERA 161 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 58999999 9999999999999999999999974
No 187
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.81 E-value=0.00015 Score=77.12 Aligned_cols=94 Identities=18% Similarity=0.228 Sum_probs=70.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |+.|+-+|..|++.|.+|+|+|+.+.... .++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------~~~---------------------- 223 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA------------------SMD---------------------- 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS------------------SSC----------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc------------------ccC----------------------
Confidence 4799999 99999999999999999999998731100 000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEE--eCCeEEEEEc-----CCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICT--YENAAVLLLA-----EGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~--~~~gv~v~~~-----~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|+++.. +++.+.+.+. +++++.+|.||.|+|.
T Consensus 224 ---------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 224 ---------------GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 11224455666778999999999999976 4455666664 3467999999999995
No 188
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.77 E-value=0.00014 Score=76.40 Aligned_cols=95 Identities=17% Similarity=0.242 Sum_probs=71.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++|+....-. ..++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-----------------~~~~---------------------- 190 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE-----------------RVTA---------------------- 190 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-----------------TTSC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-----------------chhh----------------------
Confidence 4699999 99999999999999999999998631000 0000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEE--eCCeE-EEEEcCCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICT--YENAA-VLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~--~~~gv-~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|+++.. +++.+ .|.+++|+++.+|.||.|+|.
T Consensus 191 ---------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 191 ---------------PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp ---------------HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred ---------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 11223455566677999999999999975 34444 577778888999999999995
No 189
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.77 E-value=0.00016 Score=78.01 Aligned_cols=96 Identities=19% Similarity=0.218 Sum_probs=74.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++|+....- ..++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l------------------~~~~---------------------- 254 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK------------------LIKD---------------------- 254 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT------------------TCCS----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc------------------cccc----------------------
Confidence 4799999 9999999999999999999999872100 0000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe----EEEEEcCCe-EEEcCeEEEccCCCh
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA----AVLLLAEGK-ILSSHLIIDAMGNFS 261 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g----v~v~~~~G~-~i~a~lVV~AdG~~S 261 (535)
..+.+.+.+.+++.|++++.+++|+++..++++ +.|.+++|+ ++.||.||.|+|..+
T Consensus 255 ---------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 255 ---------------NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred ---------------HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 112245666777889999999999999865555 667777777 899999999999643
No 190
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.77 E-value=7.9e-05 Score=77.71 Aligned_cols=96 Identities=18% Similarity=0.226 Sum_probs=72.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++|+.+..- .. .+ .
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l--------~~---~~-------------------~--------- 184 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL--------VR---VL-------------------G--------- 184 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------HH---HH-------------------C---------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc--------hh---hc-------------------C---------
Confidence 4799999 9999999999999999999999873110 00 00 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
..+.+.+.+.+++.|++++.+++|+++..++....|.+++|+++.||.||.|+|..
T Consensus 185 ---------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 185 ---------------RRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp ---------------HHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred ---------------HHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 01124455566677999999999999965443346778889999999999999953
No 191
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.75 E-value=0.00018 Score=76.61 Aligned_cols=94 Identities=16% Similarity=0.192 Sum_probs=71.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++|+.+..-. . ++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-~d---------------------- 225 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-----------------K-FD---------------------- 225 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----------------T-SC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-----------------c-cC----------------------
Confidence 3699999 99999999999999999999998731000 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe--EEEEEcCC-eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAEG-KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g--v~v~~~~G-~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|++++.++++ +.|.+++| +++.+|.||.|+|.
T Consensus 226 ---------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 226 ---------------ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp ---------------HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 011134455566679999999999999765555 67778888 78999999999994
No 192
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.75 E-value=0.00017 Score=76.49 Aligned_cols=96 Identities=19% Similarity=0.279 Sum_probs=74.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHC-CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFK-GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~-G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
-+|+||| |..|+-+|..|++. |.+|+++|+...... +.++
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~-----------------~~~~--------------------- 201 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP-----------------GFTS--------------------- 201 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST-----------------TTSC---------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc-----------------cccC---------------------
Confidence 4799999 99999999999999 999999998621000 0000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
..+.+.+.+.+.+.|++++.+++|++++.+++.+.+.+.+|+++.+|.||.|+|..
T Consensus 202 ----------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 202 ----------------KSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp ----------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEE
T ss_pred ----------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCC
Confidence 11224566677788999999999999977667777888888899999999999953
No 193
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.75 E-value=0.00013 Score=76.98 Aligned_cols=94 Identities=18% Similarity=0.224 Sum_probs=70.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
..+|+||| |++|+.+|..|++.|.+|+|+|+...... ..++
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~~~~--------------------- 190 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG-----------------VYLD--------------------- 190 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-----------------TTCC---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc-----------------ccCC---------------------
Confidence 46899999 99999999999999999999998731100 0000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeE-EEEEcCCeEEEcCeEEEccCC
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv-~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|+++..+ +.+ .+.+ +++++.+|.||.|+|.
T Consensus 191 ----------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 191 ----------------KEFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGV 244 (447)
T ss_dssp ----------------HHHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCE
T ss_pred ----------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCC
Confidence 112345666777889999999999998644 443 3555 5678999999999995
No 194
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.74 E-value=0.0002 Score=74.55 Aligned_cols=91 Identities=21% Similarity=0.341 Sum_probs=69.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+|+|+.+..-. ..++
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------~~~~---------------------- 186 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS-----------------RAAP---------------------- 186 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----------------TTSC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-----------------cccC----------------------
Confidence 4799999 99999999999999999999998731000 0000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|++++ ++ .|.+++|+++.+|.||.|+|.
T Consensus 187 ---------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 187 ---------------ATLADFVARYHAAQGVDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGV 237 (408)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCC
Confidence 1122445566677899999999999996 34 566778889999999999995
No 195
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.74 E-value=0.00023 Score=76.16 Aligned_cols=95 Identities=17% Similarity=0.240 Sum_probs=74.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.++||| |..|+-+|..|++.|.+|+++|+.+..-. . ++
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-~d---------------------- 222 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-----------------Y-ED---------------------- 222 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-----------------C-SS----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-----------------c-cC----------------------
Confidence 4799999 99999999999999999999998721000 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
..+.+.+.+.+++.|++++.+++|++++.+++++.+.+.+|+++.+|.||.|+|..
T Consensus 223 ---------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 223 ---------------ADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred ---------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 11224566667788999999999999987666777877778889999999999953
No 196
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.73 E-value=0.00012 Score=75.70 Aligned_cols=101 Identities=20% Similarity=0.130 Sum_probs=63.1
Q ss_pred cEEEEc-chHHHHHHHHHHHCC--CcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKG--LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G--~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
.||||| |++|+++|..|++.| .+|+|||++..... ... +..+ -.|. ..+..+
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~----~p~---~~~v-~~g~-------------~~~~~~---- 58 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYT----CYM---SNEV-IGGD-------------RELASL---- 58 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEEC----STT---HHHH-HHTS-------------SCGGGG----
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCC----ccC---HHHH-hcCC-------------CCHHHH----
Confidence 599999 999999999999876 58999998742111 000 0000 0011 111000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
. .+. +.+.+.|++++.+ +|++|+ .+..++.+.+|.++.+|.+|+|+|..
T Consensus 59 ----~--------~~~--------~~~~~~gv~~i~~-~v~~id--~~~~~v~~~~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 59 ----R--------VGY--------DGLRAHGIQVVHD-SALGID--PDKKLVKTAGGAEFAYDRCVVAPGID 107 (401)
T ss_dssp ----E--------ECS--------HHHHHTTCEEECS-CEEEEE--TTTTEEEETTSCEEECSEEEECCCEE
T ss_pred ----h--------hCH--------HHHHHCCCEEEEe-EEEEEE--ccCcEEEecccceeecceeeeccCCc
Confidence 0 000 1223468888754 788874 44445667788899999999999964
No 197
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.72 E-value=0.00011 Score=79.82 Aligned_cols=33 Identities=30% Similarity=0.528 Sum_probs=31.0
Q ss_pred cccEEEEc-chHHHHHHHHHHH-CCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSF-KGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr-~G~~V~liEr~~ 142 (535)
+||+|||| |.+|+.+|..|++ .|.+|+|||++.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~ 36 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGV 36 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCC
Confidence 59999999 9999999999999 699999999974
No 198
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.67 E-value=0.00027 Score=74.53 Aligned_cols=94 Identities=20% Similarity=0.081 Sum_probs=72.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.++||| |..|+-+|..|++.|.+|+++|+.+.... ..++
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------~~~d---------------------- 188 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP-----------------KYFD---------------------- 188 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----------------TTCC----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc-----------------ccCC----------------------
Confidence 4699999 99999999999999999999998731000 0000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|++++..++++.|.+++| ++.||.||.|+|.
T Consensus 189 ---------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 189 ---------------KEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNL 242 (452)
T ss_dssp ---------------HHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCC
T ss_pred ---------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCC
Confidence 11224566667778999999999999987677777777666 8999999999995
No 199
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.65 E-value=0.0002 Score=76.23 Aligned_cols=95 Identities=17% Similarity=0.159 Sum_probs=72.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+|+|+.+..-. . ++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-----------------~-~~---------------------- 225 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-----------------G-AD---------------------- 225 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----------------T-SC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-----------------c-cC----------------------
Confidence 4799999 99999999999999999999998731000 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcC----CeEEEcCeEEEccCCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE----GKILSSHLIIDAMGNF 260 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~----G~~i~a~lVV~AdG~~ 260 (535)
..+.+.+.+.+.+.|++++.+++|++++.+++++.+.+.+ |+++.+|.||.|+|..
T Consensus 226 ---------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 226 ---------------RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp ---------------HHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred ---------------HHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 0111345555667799999999999998777777777766 6679999999999953
No 200
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.65 E-value=0.00031 Score=75.21 Aligned_cols=94 Identities=16% Similarity=0.193 Sum_probs=72.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |+.|+-+|..|++.|.+|+|+|+.+..-. . ++
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-~d---------------------- 216 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-----------------K-FD---------------------- 216 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-----------------T-SC----------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-----------------c-cc----------------------
Confidence 3799999 99999999999999999999998621000 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe-EEEEEcCCeE-EEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKI-LSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g-v~v~~~~G~~-i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|+++..++++ +.+.+++|++ +.+|.||.|+|.
T Consensus 217 ---------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 217 ---------------ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCB
T ss_pred ---------------hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCC
Confidence 011134556667789999999999999765443 6777878877 999999999995
No 201
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.65 E-value=0.00037 Score=73.51 Aligned_cols=95 Identities=18% Similarity=0.259 Sum_probs=70.8
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+|+|+....-. ..++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------~~~~---------------------- 190 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY-----------------KYFD---------------------- 190 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT-----------------TTSC----------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh-----------------hhhh----------------------
Confidence 3699999 99999999999999999999998721000 0000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|+++..+++++.....+|+++.+|.||.|+|.
T Consensus 191 ---------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~ 245 (452)
T 2cdu_A 191 ---------------KEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGF 245 (452)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred ---------------hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCC
Confidence 1122445666778899999999999997656666422337888999999999994
No 202
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.64 E-value=0.00021 Score=75.14 Aligned_cols=108 Identities=17% Similarity=0.070 Sum_probs=65.7
Q ss_pred cEEEEc-chHHHHHHHHHHHCC--CcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKG--LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G--~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 188 (535)
.||||| |++|+++|..|++.| .+|+|||++......++ .+..+ +........
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~------~l~~~--------------~~~~~~~~~----- 56 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANC------ALPYV--------------IGEVVEDRR----- 56 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGG------GHHHH--------------HTTSSCCGG-----
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcc------hhHHH--------------HcCCccchh-----
Confidence 499999 999999999999998 57999999742221111 11111 000000000
Q ss_pred cCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc---CCeEEEcCeEEEccCCC
Q 009427 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGNF 260 (535)
Q Consensus 189 ~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~---~G~~i~a~lVV~AdG~~ 260 (535)
. .....+.. + ..+.+++++.+++|+.+..+...+.+... ++.++.+|.+|+|+|..
T Consensus 57 --~-------~~~~~~~~----~---~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 57 --Y-------ALAYTPEK----F---YDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp --G-------TBCCCHHH----H---HHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEE
T ss_pred --h-------hhhcCHHH----H---HHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCc
Confidence 0 00011111 1 23458999999999998655555555442 23468999999999964
No 203
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.63 E-value=0.0003 Score=75.11 Aligned_cols=94 Identities=15% Similarity=0.207 Sum_probs=73.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHC---CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFK---GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~---G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
-.++||| |..|+-+|..|++. |.+|+|+|+.+..-. . ++
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-----------------~-~d------------------- 230 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR-----------------G-FD------------------- 230 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST-----------------T-SC-------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc-----------------c-cC-------------------
Confidence 4799999 99999999999999 999999998731000 0 00
Q ss_pred cccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCC-eEEEEEcCCeEEEcCeEEEccCC
Q 009427 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~-gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|+++..+++ .+.|.+++|+++.+|.||.|+|.
T Consensus 231 ------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 231 ------------------SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp ------------------HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred ------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCC
Confidence 01224566667788999999999999976654 36778878888999999999995
No 204
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.63 E-value=0.00043 Score=73.35 Aligned_cols=94 Identities=14% Similarity=0.193 Sum_probs=70.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+|+|+.+..-. . ++
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-~d---------------------- 214 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-----------------T-LD---------------------- 214 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------------T-SC----------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-----------------c-CC----------------------
Confidence 4799999 99999999999999999999998721000 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHH-HhCCCEEEeCceEEEEEEeCCeEEEEEc--CC--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRF-ISLGGVIFEGYSVSSICTYENAAVLLLA--EG--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a-~~~G~~i~~~~~V~~i~~~~~gv~v~~~--~G--~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+ .+.|++++.+++|++++.+++++.+.+. +| +++.+|.||.|+|.
T Consensus 215 ---------------~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~ 274 (468)
T 2qae_A 215 ---------------EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGR 274 (468)
T ss_dssp ---------------HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCc
Confidence 11224456666 7789999999999999876666777765 56 67999999999995
No 205
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.62 E-value=0.00036 Score=74.00 Aligned_cols=95 Identities=13% Similarity=0.182 Sum_probs=71.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |+.|+-+|..|++.|.+|+|+|+.+.... + .++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~----------------~~~---------------------- 219 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG-V----------------GID---------------------- 219 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC-S----------------SCC----------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC-c----------------ccC----------------------
Confidence 4799999 99999999999999999999998731000 0 000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe-EEEEE-----cCCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLL-----AEGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g-v~v~~-----~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|+++..++++ +.+++ .+++++.+|.||.|+|.
T Consensus 220 ---------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 220 ---------------MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGR 280 (474)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCC
Confidence 112244556667789999999999999876655 66664 34578999999999994
No 206
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.62 E-value=0.00036 Score=74.63 Aligned_cols=94 Identities=22% Similarity=0.314 Sum_probs=72.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHC---CCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFK---GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~---G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~ 186 (535)
-.|+||| |..|+-+|..|++. |.+|+|+|+.+..-. . ++
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-----------------~-~d------------------- 234 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-----------------G-FD------------------- 234 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT-----------------T-SC-------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc-----------------c-cC-------------------
Confidence 3799999 99999999999999 999999998621000 0 00
Q ss_pred cccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCC-eEEEEEcCCeEEEcCeEEEccCC
Q 009427 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 187 ~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~-gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|+++..+++ .+.|.+.+|+++.+|.||.|+|.
T Consensus 235 ------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 235 ------------------ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp ------------------HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred ------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 01124455666778999999999999976654 36777888888999999999994
No 207
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.62 E-value=0.00041 Score=73.38 Aligned_cols=94 Identities=24% Similarity=0.340 Sum_probs=70.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+|+|+.+..-. . ++
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-~~---------------------- 211 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP-----------------N-ED---------------------- 211 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------------T-SC----------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc-----------------c-cC----------------------
Confidence 4799999 99999999999999999999998731000 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc-CC--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-EG--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~-~G--~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|+++..+++++.+.+. +| +++.+|.||.|+|.
T Consensus 212 ---------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 212 ---------------ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp ---------------HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCC
Confidence 011133455566679999999999999766666777764 56 67999999999994
No 208
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.62 E-value=0.00046 Score=73.06 Aligned_cols=93 Identities=22% Similarity=0.218 Sum_probs=72.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++|+.. . . + . ++
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~---~--~----------l---~-~~---------------------- 215 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNT---L--F----------F---R-ED---------------------- 215 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC---T--T----------T---T-SC----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC---c--c----------C---C-CC----------------------
Confidence 3699999 9999999999999999999999862 1 0 0 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
..+.+.+.+.+.+.|++++.+++|+++..+++.+.+.++ +.++.+|.||.|+|..
T Consensus 216 ---------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 216 ---------------PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEE
T ss_pred ---------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCC
Confidence 112245666677889999999999999877666667764 5689999999999954
No 209
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.61 E-value=0.00039 Score=74.35 Aligned_cols=95 Identities=21% Similarity=0.213 Sum_probs=72.0
Q ss_pred ccEEEEc-chHHHHHHHHHHH----CCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccc
Q 009427 111 FDVIVCG-GTLGIFIATALSF----KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr----~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~ 185 (535)
-.|+||| |..|+-+|..|++ .|.+|+++++...... ..++
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~-----------------~~l~------------------ 225 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG-----------------KILP------------------ 225 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT-----------------TTSC------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc-----------------ccCC------------------
Confidence 3699999 9999999999987 4789999987621000 0000
Q ss_pred ccccCcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 186 FEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 186 ~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|+++..+++.+.|.+.+|+++.||.||.|.|.
T Consensus 226 -------------------~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 226 -------------------EYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp -------------------HHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred -------------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCC
Confidence 1122445566777899999999999998766777788888989999999999995
No 210
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.59 E-value=0.00046 Score=74.81 Aligned_cols=95 Identities=19% Similarity=0.292 Sum_probs=73.5
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (535)
.|+||| |..|+-+|..|++.|.+|+++|+.+.... . ++
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-~~----------------------- 191 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT-----------------P-VD----------------------- 191 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT-----------------T-SC-----------------------
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch-----------------h-cC-----------------------
Confidence 799999 99999999999999999999998731000 0 00
Q ss_pred cceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEe-------------------CCeEEEEEcCCeEEEcC
Q 009427 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY-------------------ENAAVLLLAEGKILSSH 251 (535)
Q Consensus 191 ~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~-------------------~~gv~v~~~~G~~i~a~ 251 (535)
..+.+.+.+.+.+.|++++.+++|+++..+ ++++.+.+.+|+++.||
T Consensus 192 --------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D 257 (565)
T 3ntd_A 192 --------------REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETD 257 (565)
T ss_dssp --------------HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEES
T ss_pred --------------HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcC
Confidence 011244555667789999999999999763 55677777788899999
Q ss_pred eEEEccCCCh
Q 009427 252 LIIDAMGNFS 261 (535)
Q Consensus 252 lVV~AdG~~S 261 (535)
.||.|+|...
T Consensus 258 ~vi~a~G~~p 267 (565)
T 3ntd_A 258 LLIMAIGVRP 267 (565)
T ss_dssp EEEECSCEEE
T ss_pred EEEECcCCcc
Confidence 9999999754
No 211
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.54 E-value=6e-05 Score=78.40 Aligned_cols=34 Identities=35% Similarity=0.636 Sum_probs=31.8
Q ss_pred CcccEEEEc-chHHHHHHHHHHHC-CCcEEEEcccC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFK-GLRVAIVERNT 142 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~-G~~V~liEr~~ 142 (535)
+++||+||| |++|+++|+.|+++ |++|+|+|++.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~ 41 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRP 41 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 368999999 99999999999999 99999999984
No 212
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.53 E-value=0.00065 Score=72.25 Aligned_cols=93 Identities=20% Similarity=0.247 Sum_probs=69.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-+|+||| |+.|+.+|..|++.|.+|+|+|+.+... ..++
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------------~~~~---------------------- 226 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIG------------------TIYD---------------------- 226 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTT------------------SSSC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchh------------------hcCC----------------------
Confidence 5799999 9999999999999999999999872100 0000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeE-EEEEcCCeEEEcCeEEEccCCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv-~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
..+.+.+.+.+++.|++++.+++|+++..+ +++ .+.+ ++.++.+|.||.|+|..
T Consensus 227 ---------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 227 ---------------GDMAEYIYKEADKHHIEILTNENVKAFKGN-ERVEAVET-DKGTYKADLVLVSVGVK 281 (480)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SBEEEEEE-TTEEEECSEEEECSCEE
T ss_pred ---------------HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC-CcEEEEEE-CCCEEEcCEEEECcCCC
Confidence 112245666677889999999999999754 444 3444 45689999999999953
No 213
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.53 E-value=0.00075 Score=71.95 Aligned_cols=94 Identities=19% Similarity=0.281 Sum_probs=72.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+|+|+.+.... .+ +
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------~~-d---------------------- 238 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG-----------------GM-D---------------------- 238 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS-----------------SS-C----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc-----------------cC-C----------------------
Confidence 3699999 99999999999999999999998731000 00 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcC---C--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE---G--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~---G--~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|++++.+++++.+.+.+ | +++.+|.||.|+|.
T Consensus 239 ---------------~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 239 ---------------GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred ---------------HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 1122445566677899999999999998888887777653 4 57999999999994
No 214
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.53 E-value=8.1e-05 Score=77.56 Aligned_cols=42 Identities=7% Similarity=-0.008 Sum_probs=35.3
Q ss_pred CCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 218 LGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 218 ~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
.+.+++.+++|++|..++++++|++.+|+ ++||.||.|.+..
T Consensus 216 l~~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 216 LEHPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLE 257 (424)
T ss_dssp SSSCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHH
T ss_pred hcceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHH
Confidence 35678899999999887788888887665 8999999999964
No 215
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.53 E-value=0.00075 Score=72.99 Aligned_cols=92 Identities=14% Similarity=0.184 Sum_probs=74.3
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (535)
.++||| |+.|+-.|..+++.|.+|+|+++...-. + ++.
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~------------------~-~D~---------------------- 263 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR------------------G-FDQ---------------------- 263 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST------------------T-SCH----------------------
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc------------------c-cch----------------------
Confidence 699999 9999999999999999999998752111 0 010
Q ss_pred cceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 191 ~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
.+.+.+.+.+++.|+.++.++.+..+...++.+.+.+.++.++.+|.|+.|.|.
T Consensus 264 ---------------ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 264 ---------------QCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp ---------------HHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred ---------------hHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccc
Confidence 111345566677899999999999999989999999888888999999999994
No 216
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.52 E-value=7.8e-05 Score=77.48 Aligned_cols=34 Identities=38% Similarity=0.618 Sum_probs=32.0
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.++||+||| |++|+++|+.|+++|.+|+|+|+..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~ 62 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRP 62 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccC
Confidence 469999999 9999999999999999999999974
No 217
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.52 E-value=7.5e-05 Score=79.45 Aligned_cols=52 Identities=15% Similarity=0.199 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCC---eEEEcCeEEEccCC
Q 009427 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG---KILSSHLIIDAMGN 259 (535)
Q Consensus 206 ~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G---~~i~a~lVV~AdG~ 259 (535)
.+.+.|.+.+.+ ++|+.+++|++|..++++++|++.+| ++++||.||.|...
T Consensus 240 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~ 294 (489)
T 2jae_A 240 RIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPP 294 (489)
T ss_dssp HHHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCH
T ss_pred HHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCH
Confidence 466666665532 67999999999999999999888776 67999999999974
No 218
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.52 E-value=0.00028 Score=74.61 Aligned_cols=92 Identities=22% Similarity=0.247 Sum_probs=67.8
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-+|+||| |++|+.+|..|++.|.+|+|+|+.+.... . ++
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-~~---------------------- 211 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-----------------T-YD---------------------- 211 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----------------T-SC----------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-----------------c-cC----------------------
Confidence 4799999 99999999999999999999998731100 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCC--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G--~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|++++. +++.++..+| .++.+|.||.|+|.
T Consensus 212 ---------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~v~v~~~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 212 ---------------SELTAPVAESLKKLGIALHLGHSVEGYEN--GCLLANDGKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp ---------------HHHHHHHHHHHHHHTCEEETTCEEEEEET--TEEEEECSSSCCCEECCSCEEECCCE
T ss_pred ---------------HHHHHHHHHHHHHCCCEEEECCEEEEEEe--CCEEEEECCCceEEEECCEEEECcCC
Confidence 01113345556667999999999999864 4455554356 58999999999995
No 219
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.51 E-value=0.00034 Score=74.05 Aligned_cols=94 Identities=17% Similarity=0.225 Sum_probs=70.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |+.|+-+|..|++.|.+|+|+|+.+.... . ++
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-----------------~-~~---------------------- 217 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP-----------------T-MD---------------------- 217 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----------------T-SC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-----------------c-cc----------------------
Confidence 4799999 99999999999999999999998731000 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc---CC--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EG--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~---~G--~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|+++..+++++.+.+. +| +++.+|.||.|+|.
T Consensus 218 ---------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 277 (470)
T 1dxl_A 218 ---------------AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGR 277 (470)
T ss_dssp ---------------HHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCE
T ss_pred ---------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCC
Confidence 012244556667789999999999999765555666654 44 67999999999995
No 220
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.49 E-value=0.00079 Score=66.84 Aligned_cols=92 Identities=16% Similarity=0.130 Sum_probs=67.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++++...... +
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--------------------~---------------------- 183 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA--------------------E---------------------- 183 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC--------------------C----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc--------------------C----------------------
Confidence 4699999 99999999999999999999998621000 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEE-EEEcC----C--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAE----G--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~-v~~~~----G--~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|+++..+++++. |.+.+ | .++.+|.||.|+|.
T Consensus 184 ---------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 184 ---------------KILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp ---------------HHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred ---------------HHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 01113455566678999999999999976654432 44433 4 57999999999994
No 221
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.48 E-value=0.00087 Score=71.05 Aligned_cols=94 Identities=17% Similarity=0.176 Sum_probs=72.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |+.|+-+|..|++.|.+|+++|+.+..-. . ++
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-~~---------------------- 220 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-----------------A-VD---------------------- 220 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----------------T-SC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-----------------c-cC----------------------
Confidence 4699999 99999999999999999999998631000 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCC---eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG---KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G---~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|++++.+++++.+.+.++ +++.+|.||.|+|.
T Consensus 221 ---------------~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 221 ---------------EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp ---------------HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCC
Confidence 11224455666778999999999999987777777777654 67999999999994
No 222
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.48 E-value=0.00012 Score=78.54 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=30.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
+..||||| |++|+.+|..|++.+++|+|||+++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 56899999 9999999999999999999999873
No 223
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.47 E-value=0.0001 Score=76.09 Aligned_cols=32 Identities=28% Similarity=0.499 Sum_probs=31.0
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.+||+||| |++|+++|+.|+++|++|+|+|+.
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 58999999 999999999999999999999997
No 224
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.47 E-value=0.00011 Score=77.30 Aligned_cols=58 Identities=16% Similarity=0.127 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChH
Q 009427 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (535)
Q Consensus 205 ~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~ 262 (535)
..+.+.|.+.+.+.|++++.+++|++|..++++++....+|+++.||.||.|.|.++.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 4688888888888899999999999998888777643457888999999999998864
No 225
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.45 E-value=0.00089 Score=70.80 Aligned_cols=93 Identities=13% Similarity=0.193 Sum_probs=72.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.++||| |..|+-+|..|++.|.+|.++++.+..-. .+ +
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~-----------------~~-~---------------------- 210 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS-----------------RF-D---------------------- 210 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------------TS-C----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-----------------cc-C----------------------
Confidence 4799999 99999999999999999999998731000 00 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe-EEEE-EcCCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLL-LAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g-v~v~-~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|++++.++++ +.|. +++|+ +.+|.||.|+|.
T Consensus 211 ---------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 211 ---------------QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGR 266 (463)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCc
Confidence 112245666777889999999999999876565 5677 77787 999999999995
No 226
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.45 E-value=0.0016 Score=68.60 Aligned_cols=131 Identities=11% Similarity=0.116 Sum_probs=74.9
Q ss_pred cccEEEEc-chHHHHHHHHHHHC--CCcEEEEcccCCC-CCc-ccc--c-ccHHHHHHHHHcCCCChHhHHHHHhhhcCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFK--GLRVAIVERNTLK-GRE-QEW--N-ISRKELLELVESGILVEDDIDEATATKFNP 181 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~~~-~~~-~~~--~-is~~~l~~L~~lGl~~~~~~~~~~~~~~~~ 181 (535)
.-.|+||| |.+|+-+|..|++. |.+|.+++|...- ... ..+ . ..+...+.+..+ +.+. ...+......
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l---~~~~-~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSR---EHAE-RERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHS---CHHH-HHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcC---CHHH-HHHHHHHhhc
Confidence 35799999 99999999999999 9999999997421 110 000 0 111111112111 1111 1111111000
Q ss_pred CcccccccCcceeeeccccccCHH---HHHHH-HHHHHHh-CCCEEEeCceEEEEEEeCCeEEEEEc---CCe--EEEcC
Q 009427 182 NRCGFEGKGEIWVEDILNLGVSPA---KLIEI-VKKRFIS-LGGVIFEGYSVSSICTYENAAVLLLA---EGK--ILSSH 251 (535)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~v~~~---~l~~~-L~~~a~~-~G~~i~~~~~V~~i~~~~~gv~v~~~---~G~--~i~a~ 251 (535)
. .| ..++.. .+.+. ..+++.. .|++++.+++|+++..+++++.+++. +|+ ++.+|
T Consensus 303 --~-------~~------~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D 367 (463)
T 3s5w_A 303 --T-------NY------SVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYD 367 (463)
T ss_dssp --G-------TS------SCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEES
T ss_pred --c-------CC------CcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECC
Confidence 0 00 011111 11122 2233332 58999999999999888888888775 564 49999
Q ss_pred eEEEccCC
Q 009427 252 LIIDAMGN 259 (535)
Q Consensus 252 lVV~AdG~ 259 (535)
.||.|+|.
T Consensus 368 ~Vv~AtG~ 375 (463)
T 3s5w_A 368 AVILATGY 375 (463)
T ss_dssp EEEECCCE
T ss_pred EEEEeeCC
Confidence 99999994
No 227
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.43 E-value=0.00068 Score=72.29 Aligned_cols=93 Identities=20% Similarity=0.270 Sum_probs=68.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+|+|+.+..-. ..++
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------~~~~---------------------- 235 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA-----------------GYYD---------------------- 235 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-----------------TTSC----------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh-----------------hHHH----------------------
Confidence 4699999 99999999999999999999998731000 0000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeE-EEEEcCCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv-~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|+++.. ++.+ .+.+ +|+++.+|.||.|+|.
T Consensus 236 ---------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 236 ---------------RDLTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGF 289 (490)
T ss_dssp ---------------HHHHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCE
T ss_pred ---------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCC
Confidence 11224455666778999999999999964 3333 3455 6788999999999994
No 228
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.43 E-value=0.0011 Score=70.80 Aligned_cols=93 Identities=23% Similarity=0.228 Sum_probs=70.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++|+.+... ..++
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l------------------~~~d---------------------- 214 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA------------------NLQD---------------------- 214 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT------------------TCCC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc------------------ccCC----------------------
Confidence 4799999 9999999999999999999999873110 0000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc--CC--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA--EG--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~--~G--~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+. ++++.+++|++++.+++++.+.+. +| .++.+|.||.|+|.
T Consensus 215 ---------------~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 215 ---------------EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp ---------------HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCC
T ss_pred ---------------HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCC
Confidence 01113344455555 999999999999877777877774 67 67999999999995
No 229
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.42 E-value=9.2e-05 Score=79.53 Aligned_cols=40 Identities=13% Similarity=0.156 Sum_probs=34.9
Q ss_pred CEEEeCceEEEEEEe-CCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 220 GVIFEGYSVSSICTY-ENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 220 ~~i~~~~~V~~i~~~-~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
++|+.+++|++|..+ ++++.|++.+|++++||.||.|.+.
T Consensus 215 ~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~ 255 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQ 255 (516)
T ss_dssp GGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCH
T ss_pred CEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCH
Confidence 569999999999876 5678898888888999999999974
No 230
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.40 E-value=9.3e-05 Score=76.07 Aligned_cols=32 Identities=28% Similarity=0.549 Sum_probs=30.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
+||+||| |++|+++|+.|+++|++|+|+|++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 34 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRN 34 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCC
Confidence 7999999 9999999999999999999999974
No 231
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.40 E-value=7.4e-05 Score=80.34 Aligned_cols=34 Identities=29% Similarity=0.524 Sum_probs=30.9
Q ss_pred CcccEEEEc-chHHHHHHHHHHH-CCCcEEEEcccC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSF-KGLRVAIVERNT 142 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr-~G~~V~liEr~~ 142 (535)
++||+|||| |++|+.+|..|++ .|++|+|||++.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 379999999 9999999999998 689999999983
No 232
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.39 E-value=0.001 Score=67.54 Aligned_cols=102 Identities=17% Similarity=0.087 Sum_probs=70.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |.+|+-+|..|++.|.+|+++++...... ..+.+. .
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~------------------------------~~~d~~-~----- 210 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND------------------------------PDADPS-V----- 210 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------------------------------------CT-T-----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC------------------------------CCCCCC-c-----
Confidence 3799999 99999999999999999999998621000 000000 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCC-CEEEeCceEEEEEEeCCeEEEEEcCCeEEE-cCeEEEccCCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLG-GVIFEGYSVSSICTYENAAVLLLAEGKILS-SHLIIDAMGNF 260 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G-~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~-a~lVV~AdG~~ 260 (535)
.+ +..+.+.+.+.+.+.| ++++.+++|+++..+++++.+.+.+|+++. +|.||.|+|..
T Consensus 211 -----------~~-~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 211 -----------RL-SPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp -----------SC-CHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBC
T ss_pred -----------cC-CHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccC
Confidence 00 1122244555566776 999999999999767777778888886664 69999999953
No 233
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.38 E-value=0.00011 Score=80.82 Aligned_cols=37 Identities=27% Similarity=0.499 Sum_probs=33.7
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKG 145 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~ 145 (535)
.+||||||| |++|+++|+.|++.|++|+|||+....+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 369999999 9999999999999999999999987655
No 234
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.38 E-value=0.00011 Score=79.70 Aligned_cols=34 Identities=38% Similarity=0.587 Sum_probs=32.2
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.+||+|||| |++|+++|..|++.|++|+|||++.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 369999999 9999999999999999999999985
No 235
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.37 E-value=0.00012 Score=78.19 Aligned_cols=34 Identities=32% Similarity=0.431 Sum_probs=32.0
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTL 143 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~ 143 (535)
.+||+||| |++|+++|+.|+++|++|+|+|+...
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~ 47 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGK 47 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCC
Confidence 58999999 99999999999999999999999853
No 236
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.32 E-value=0.00077 Score=69.12 Aligned_cols=88 Identities=25% Similarity=0.379 Sum_probs=66.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |+.|+-+|..|++.|.+|+++|+.+.. + . ++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~---------------l---~-~~---------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF---------------L---G-LD---------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC---------------T---T-CC----------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee---------------c---c-CC----------------------
Confidence 3799999 999999999999999999999987310 0 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|++++ .++ +.+++|+ +.+|.||.|+|.
T Consensus 183 ---------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~~--v~~~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 183 ---------------EELSNMIKDMLEETGVKFFLNSELLEAN--EEG--VLTNSGF-IEGKVKICAIGI 232 (367)
T ss_dssp ---------------HHHHHHHHHHHHHTTEEEECSCCEEEEC--SSE--EEETTEE-EECSCEEEECCE
T ss_pred ---------------HHHHHHHHHHHHHCCCEEEcCCEEEEEE--eeE--EEECCCE-EEcCEEEECcCC
Confidence 0112445566677899999999999985 333 4566777 999999999994
No 237
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.28 E-value=0.0015 Score=69.41 Aligned_cols=93 Identities=16% Similarity=0.157 Sum_probs=69.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.++||| |..|+-+|..|++.|.+|+++++..+.. .+ +
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~------------------~~-d---------------------- 226 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR------------------GF-D---------------------- 226 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST------------------TS-C----------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc------------------cc-C----------------------
Confidence 3699999 9999999999999999999998752110 00 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe-EEEEEcCC-----eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEG-----KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g-v~v~~~~G-----~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|++++.++++ +.|.+.++ .++.+|.||.|+|.
T Consensus 227 ---------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 227 ---------------QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp ---------------HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 011234555667789999999999999775553 56666543 27999999999994
No 238
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.27 E-value=0.002 Score=68.27 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=70.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++++.+..-. . ++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-~d---------------------- 227 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-----------------S-FD---------------------- 227 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----------------T-SC----------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc-----------------c-cC----------------------
Confidence 3699999 99999999999999999999998621000 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCe--EEEEEcC-------CeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAE-------GKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~g--v~v~~~~-------G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++|++++.++++ +.+.+.+ |.++.+|.||.|+|.
T Consensus 228 ---------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 228 ---------------SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 011234555667789999999999999876665 5566654 257999999999994
No 239
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.26 E-value=0.0012 Score=65.94 Aligned_cols=88 Identities=18% Similarity=0.049 Sum_probs=65.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|.++++..... .
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~---------------------~---------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR---------------------A---------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC---------------------S----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC---------------------C----------------------
Confidence 4699999 9999999999999999999999862100 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhC-CCEEEeCceEEEEEEeCCeEE-EEEcC-----CeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAAV-LLLAE-----GKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-G~~i~~~~~V~~i~~~~~gv~-v~~~~-----G~~i~a~lVV~AdG~ 259 (535)
.+.+.+++.+. |++++.+++|+++..+++++. |.+.+ +.++.+|.||.|+|.
T Consensus 211 ------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 211 ------------------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp ------------------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred ------------------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 01233444454 899999999999977655433 44443 357999999999994
No 240
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.22 E-value=0.0017 Score=70.89 Aligned_cols=94 Identities=17% Similarity=0.230 Sum_probs=70.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++|+...... . ++
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-~~---------------------- 227 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP-----------------P-ID---------------------- 227 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----------------T-SC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc-----------------c-CC----------------------
Confidence 3699999 99999999999999999999998631000 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCCh
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S 261 (535)
..+.+.+.+.+.+.|++++.+++|++++.++++ |.+.+|+++.+|.||.|+|...
T Consensus 228 ---------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G~~p 282 (588)
T 3ics_A 228 ---------------YEMAAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIGVQP 282 (588)
T ss_dssp ---------------HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSCEEE
T ss_pred ---------------HHHHHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccCCCC
Confidence 111244556667789999999999998654343 5567888999999999999754
No 241
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.21 E-value=0.00028 Score=74.77 Aligned_cols=33 Identities=33% Similarity=0.462 Sum_probs=31.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.+||+||| ||+|+++|..|++.|++|+|+|+..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~ 155 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYD 155 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 58999999 9999999999999999999999975
No 242
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.19 E-value=0.00027 Score=75.35 Aligned_cols=51 Identities=10% Similarity=0.079 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCe----EEEcCeEEEccCC
Q 009427 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK----ILSSHLIIDAMGN 259 (535)
Q Consensus 206 ~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~----~i~a~lVV~AdG~ 259 (535)
.+.+.|.+.+. .+|+.+++|++|..+++++.|++.+|+ +++||.||.|.+.
T Consensus 242 ~l~~~l~~~l~---~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~ 296 (498)
T 2iid_A 242 KLPTAMYRDIQ---DKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTS 296 (498)
T ss_dssp HHHHHHHHHTG---GGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCH
T ss_pred HHHHHHHHhcc---cccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCCh
Confidence 34444544432 278999999999988888888876653 5899999999985
No 243
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.15 E-value=0.0036 Score=66.58 Aligned_cols=92 Identities=20% Similarity=0.246 Sum_probs=67.9
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (535)
.|+||| |..|+-+|..|++.|.+|+++++..+.. . ++
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~------------------~-~d----------------------- 224 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR------------------G-FD----------------------- 224 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST------------------T-SC-----------------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc------------------c-CC-----------------------
Confidence 699999 9999999999999999999999752110 0 00
Q ss_pred cceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCC-eEEEEEcC---Ce--EEEcCeEEEccCC
Q 009427 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAE---GK--ILSSHLIIDAMGN 259 (535)
Q Consensus 191 ~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~-gv~v~~~~---G~--~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.++.++++...++ .+.+.+.+ |+ ++.+|.||.|+|.
T Consensus 225 --------------~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 225 --------------QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp --------------HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred --------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC
Confidence 01123455566778999999999999976443 45565543 54 4799999999994
No 244
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.12 E-value=0.0028 Score=63.31 Aligned_cols=92 Identities=14% Similarity=0.100 Sum_probs=66.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|.++++.+.... ..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~--------------------~~--------------------- 191 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA--------------------HE--------------------- 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS--------------------CH---------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc--------------------cH---------------------
Confidence 4799999 99999999999999999999998731000 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc---CC--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EG--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~---~G--~~i~a~lVV~AdG~ 259 (535)
.+.+.+.+.+.+.|++++.+++|+++..+++...|.+. +| .++.+|.||.|+|.
T Consensus 192 ----------------~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 192 ----------------ASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp ----------------HHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred ----------------HHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 00123445556679999999999999764332234443 56 57999999999994
No 245
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.11 E-value=0.00033 Score=72.39 Aligned_cols=33 Identities=27% Similarity=0.520 Sum_probs=31.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
++||+||| |++|+++|+.|+++|++|+|+|++.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 47999999 9999999999999999999999974
No 246
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.10 E-value=0.00041 Score=74.01 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=31.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCC-CcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKG-LRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G-~~V~liEr~~ 142 (535)
.+||+||| |++|+++|+.|+++| .+|+|+|+..
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~ 43 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECND 43 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCC
Confidence 58999999 999999999999999 7999999984
No 247
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.08 E-value=0.00021 Score=77.37 Aligned_cols=33 Identities=36% Similarity=0.640 Sum_probs=31.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTL 143 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~ 143 (535)
+||+|||| |++|+.+|..|++ |.+|+|||++..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 69999999 9999999999999 999999999853
No 248
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.07 E-value=0.0022 Score=67.42 Aligned_cols=93 Identities=19% Similarity=0.216 Sum_probs=67.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-+|+||| |..|+-+|..|++.|.+|+++|+.+.... ..++
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------~~~~---------------------- 189 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR-----------------RSFD---------------------- 189 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-----------------TTSC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch-----------------hhcC----------------------
Confidence 3799999 99999999999999999999998731000 0000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+. ++++.++.|+++..++ ++.....+++++.+|.||.|+|.
T Consensus 190 ---------------~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 190 ---------------KEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGI 242 (449)
T ss_dssp ---------------HHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCE
T ss_pred ---------------HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCC
Confidence 11224455556666 9999999999986433 44333447788999999999994
No 249
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.06 E-value=0.0049 Score=60.79 Aligned_cols=88 Identities=17% Similarity=0.055 Sum_probs=64.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++++..... . +
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------~-~---------------------- 181 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-------------------C-A---------------------- 181 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-------------------S-C----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-------------------C-C----------------------
Confidence 4799999 9999999999999999999999862100 0 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHH-hCCCEEEeCceEEEEEEeCCeE-EEEEc---CCe--EEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFI-SLGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~-~~G~~i~~~~~V~~i~~~~~gv-~v~~~---~G~--~i~a~lVV~AdG~ 259 (535)
..+.+++. +.|++++.+++++++..+++++ .+.+. +|+ ++.+|.||.|+|.
T Consensus 182 -------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 182 -------------------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp -------------------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred -------------------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 00122233 3589999999999997765543 34443 564 7899999999994
No 250
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.05 E-value=0.0021 Score=65.08 Aligned_cols=92 Identities=15% Similarity=0.111 Sum_probs=66.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++++...... . .+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~------------------~--~~-------------------- 203 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG------------------H--GK-------------------- 203 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS------------------C--SH--------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC------------------C--HH--------------------
Confidence 3699999 99999999999999999999998731100 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeE-EEEE--cCC--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLL--AEG--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv-~v~~--~~G--~~i~a~lVV~AdG~ 259 (535)
+.+.+.+...+.|++++.+++|+++..+++.+ .|.+ .+| .++.+|.||.|+|.
T Consensus 204 -----------------~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 204 -----------------TAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp -----------------HHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred -----------------HHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 00123334456789999999999998766643 2333 366 57999999999994
No 251
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.01 E-value=0.00054 Score=72.57 Aligned_cols=54 Identities=6% Similarity=0.070 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhC--------CCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 206 KLIEIVKKRFISL--------GGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 206 ~l~~~L~~~a~~~--------G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
.+.+.|.+.+.+. |++|+.+++|++|..++++++|++.+|++++||.||.|++.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCH
Confidence 4556666555443 67899999999999888889999988888999999999985
No 252
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.98 E-value=0.0026 Score=66.73 Aligned_cols=89 Identities=18% Similarity=0.300 Sum_probs=67.2
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (535)
.|+||| |+.|+-+|..+++.|.+|+|+|+...-. .. +.+
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll------------------~~-------------~d~--------- 188 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN------------------KL-------------MDA--------- 188 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS------------------TT-------------SCG---------
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeecccc------------------cc-------------ccc---------
Confidence 699999 9999999999999999999999872100 00 000
Q ss_pred cceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 191 ~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
+ . .+.+.+...+.|++++.+++|+++ +++. +.+++|+++.+|.||.|.|.
T Consensus 189 -----~---~-------~~~~~~~l~~~gV~i~~~~~v~~~--~~~~--v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 189 -----D---M-------NQPILDELDKREIPYRLNEEINAI--NGNE--ITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp -----G---G-------GHHHHHHHHHTTCCEEESCCEEEE--ETTE--EEETTSCEEECSEEEECCCE
T ss_pred -----h---h-------HHHHHHHhhccceEEEeccEEEEe--cCCe--eeecCCeEEeeeeEEEEece
Confidence 0 0 034556667789999999999887 3443 55678899999999999994
No 253
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.91 E-value=0.00076 Score=75.69 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=31.9
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
..+||+||| |++|+++|..|+++|++|+|||+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~ 422 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE 422 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 368999999 9999999999999999999999974
No 254
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.85 E-value=0.012 Score=63.18 Aligned_cols=92 Identities=14% Similarity=0.149 Sum_probs=65.7
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (535)
.|+||| |..|+-+|..|++.|.+|+|+++..+... ++
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~-------------------~d----------------------- 249 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG-------------------FD----------------------- 249 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT-------------------SC-----------------------
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEeccccccc-------------------CC-----------------------
Confidence 599999 99999999999999999999997521100 00
Q ss_pred cceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeC----CeEEEEE--cCC---eEEEcCeEEEccCC
Q 009427 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE----NAAVLLL--AEG---KILSSHLIIDAMGN 259 (535)
Q Consensus 191 ~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~----~gv~v~~--~~G---~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+.+.|++++.+++++++...+ +++.+.+ .+| .++.+|.||.|+|.
T Consensus 250 --------------~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 250 --------------QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp --------------HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCE
T ss_pred --------------HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCC
Confidence 0111345556667899999999888886543 3444443 344 25789999999994
No 255
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.85 E-value=0.0053 Score=64.84 Aligned_cols=92 Identities=15% Similarity=0.231 Sum_probs=66.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++++.+..-. ..+++
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~~~d~--------------------- 214 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI-----------------TLEDQ--------------------- 214 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----------------TSCCH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC-----------------CCCCH---------------------
Confidence 3699999 99999999999999999999998731000 00000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeC-CeEEEEEc--CCe--EEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAVLLLA--EGK--ILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~-~gv~v~~~--~G~--~i~a~lVV~AdG~ 259 (535)
.+.+.+.+... ++++.+++|+++..++ +++.+.++ +|+ ++.+|.||.|+|.
T Consensus 215 ----------------~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 215 ----------------DIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp ----------------HHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCE
T ss_pred ----------------HHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCC
Confidence 01122222222 8889999999998776 77878776 565 7999999999994
No 256
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.84 E-value=0.001 Score=73.82 Aligned_cols=41 Identities=10% Similarity=0.022 Sum_probs=35.8
Q ss_pred CCCEEEeCceEEEEEEeCCeEEEEEcC------CeEEEcCeEEEccC
Q 009427 218 LGGVIFEGYSVSSICTYENAAVLLLAE------GKILSSHLIIDAMG 258 (535)
Q Consensus 218 ~G~~i~~~~~V~~i~~~~~gv~v~~~~------G~~i~a~lVV~AdG 258 (535)
.+..|+.+++|++|..++++++|++.+ +++++||.||.|..
T Consensus 409 ~~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP 455 (662)
T 2z3y_A 409 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLP 455 (662)
T ss_dssp TTCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCC
T ss_pred hcCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCC
Confidence 356899999999999999999888765 56899999999987
No 257
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.83 E-value=0.0078 Score=59.30 Aligned_cols=88 Identities=17% Similarity=0.102 Sum_probs=64.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++++... +...
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~---------------------~~~~--------------------- 192 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT---------------------FKAQ--------------------- 192 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS---------------------CCSC---------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC---------------------CCcC---------------------
Confidence 4799999 99999999999999999999998621 0000
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHh-CCCEEEeCceEEEEEEeCCeEEEEEcC---Ce--EEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAVLLLAE---GK--ILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~G~~i~~~~~V~~i~~~~~gv~v~~~~---G~--~i~a~lVV~AdG~ 259 (535)
..+.+++.+ .|++++.+++++++..++....+.+.+ |+ ++.+|.||.|+|.
T Consensus 193 -------------------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 193 -------------------PIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp -------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred -------------------HHHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 011223333 489999999999997654433455544 64 7999999999994
No 258
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.82 E-value=0.0073 Score=59.47 Aligned_cols=88 Identities=17% Similarity=0.081 Sum_probs=63.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |+.|+-+|..|++.|.+|+++++.+.. .. +
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-------------------~~-~---------------------- 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM-------------------KA-D---------------------- 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC-------------------CS-C----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc-------------------Cc-c----------------------
Confidence 3799999 999999999999999999999986310 00 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHh-CCCEEEeCceEEEEEEeCCeE-EEEEc---CC--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLA---EG--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~G~~i~~~~~V~~i~~~~~gv-~v~~~---~G--~~i~a~lVV~AdG~ 259 (535)
+.+.+++.+ .|++++.+++++++..+++.+ .+.+. +| .++.+|.||.|+|.
T Consensus 183 -------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 183 -------------------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp -------------------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred -------------------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 012233344 589999999999997654433 24443 24 36899999999994
No 259
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.81 E-value=0.0009 Score=74.31 Aligned_cols=35 Identities=23% Similarity=0.436 Sum_probs=32.2
Q ss_pred CCcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 108 VGTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 108 ~~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
+..+||+||| |++|+++|..|+++|++|+|||+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 406 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS 406 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 3468999999 9999999999999999999999974
No 260
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.80 E-value=0.0065 Score=60.24 Aligned_cols=88 Identities=15% Similarity=0.072 Sum_probs=63.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |+.|+-+|..|++.|.+|.++++..... . .
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-------------------~-~---------------------- 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-------------------C-E---------------------- 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-------------------S-C----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-------------------C-C----------------------
Confidence 3699999 9999999999999999999999762100 0 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeE-EEEEc---CCe--EEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv-~v~~~---~G~--~i~a~lVV~AdG~ 259 (535)
..+.+++.+.|++++.+++|+++..+++.+ .+.+. +|+ ++.+|.||.|+|.
T Consensus 194 -------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 194 -------------------NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp -------------------HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred -------------------HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 112233446799999999999997654412 23332 563 6999999999994
No 261
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.79 E-value=0.00078 Score=72.17 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=31.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
+||+|||| |++|+++|..|++.|++|+|||++.
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 69999999 9999999999999999999999875
No 262
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.78 E-value=0.01 Score=58.35 Aligned_cols=89 Identities=18% Similarity=0.094 Sum_probs=64.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |+.|+-+|..|++.|.+|.++++...... ..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~--------------------~~--------------------- 186 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA--------------------AP--------------------- 186 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS--------------------CH---------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC--------------------CH---------------------
Confidence 4799999 99999999999999999999998621100 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeE---EEEEcCCe--EEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA---VLLLAEGK--ILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv---~v~~~~G~--~i~a~lVV~AdG~ 259 (535)
..+.+..++.|++++.+++++++..+++.+ ++...+|+ ++.+|.||.|+|.
T Consensus 187 -------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 187 -------------------STVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp -------------------HHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred -------------------HHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 001111235689999999999998776443 33333674 7999999999994
No 263
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.78 E-value=0.00094 Score=71.63 Aligned_cols=34 Identities=29% Similarity=0.367 Sum_probs=31.9
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.+||+|||| |++|+.+|..|++.|.+|+|||++.
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 469999999 9999999999999999999999873
No 264
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.76 E-value=0.0095 Score=59.20 Aligned_cols=88 Identities=16% Similarity=0.145 Sum_probs=62.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++++..... . +
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------~-~---------------------- 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR-------------------A-N---------------------- 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC-------------------S-C----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC-------------------c-c----------------------
Confidence 4699999 9999999999999999999999862100 0 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHh-CCCEEEeCceEEEEEEeCCeEEEEEc---CCe--EEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAVLLLA---EGK--ILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~G~~i~~~~~V~~i~~~~~gv~v~~~---~G~--~i~a~lVV~AdG~ 259 (535)
..+.+++.+ .|++++.+++|+++..++....|.+. +|+ ++.+|.||.|+|.
T Consensus 191 -------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 191 -------------------KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp -------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred -------------------hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 011223333 48999999999999754321234443 564 7899999999994
No 265
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.71 E-value=0.016 Score=63.25 Aligned_cols=92 Identities=20% Similarity=0.198 Sum_probs=64.5
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (535)
.|+||| |..|+-+|..|++.|.+|+|+++..+.. ++ ++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~------------------~~-d~---------------------- 326 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRSILLR------------------GF-DQ---------------------- 326 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST------------------TS-CH----------------------
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcC------------------cC-CH----------------------
Confidence 699999 9999999999999999999999862110 00 00
Q ss_pred cceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEe------C---CeEEEE--EcCCeEEE--cCeEEEcc
Q 009427 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY------E---NAAVLL--LAEGKILS--SHLIIDAM 257 (535)
Q Consensus 191 ~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~------~---~gv~v~--~~~G~~i~--a~lVV~Ad 257 (535)
.+.+.+.+.+.+.|++++.++.++++... + +++.+. ..+|+++. +|.||.|.
T Consensus 327 ---------------~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~ 391 (598)
T 2x8g_A 327 ---------------QMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAV 391 (598)
T ss_dssp ---------------HHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECS
T ss_pred ---------------HHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEe
Confidence 01123444556679999999888887543 2 344444 34676554 99999999
Q ss_pred CC
Q 009427 258 GN 259 (535)
Q Consensus 258 G~ 259 (535)
|.
T Consensus 392 G~ 393 (598)
T 2x8g_A 392 GR 393 (598)
T ss_dssp CE
T ss_pred CC
Confidence 94
No 266
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.70 E-value=0.0065 Score=60.20 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=64.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++++..... .. +
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~------------------~~------~----------------- 193 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR------------------AH------E----------------- 193 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS------------------SC------H-----------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC------------------cc------H-----------------
Confidence 4699999 9999999999999999999999862100 00 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcC-----CeEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE-----GKILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~-----G~~i~a~lVV~AdG~ 259 (535)
...+++.+.|++++.+++++++..+++...+.+.+ +.++.+|.||.|+|.
T Consensus 194 --------------------~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 194 --------------------HSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp --------------------HHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred --------------------HHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeecc
Confidence 00122456799999999999997554433444443 357999999999994
No 267
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.68 E-value=0.0015 Score=74.15 Aligned_cols=34 Identities=32% Similarity=0.438 Sum_probs=31.7
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
...||+||| |++|+++|+.|+++|++|+|+|+..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~ 311 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 311 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 357999999 9999999999999999999999874
No 268
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.65 E-value=0.0017 Score=71.18 Aligned_cols=39 Identities=41% Similarity=0.479 Sum_probs=34.8
Q ss_pred CCcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCC
Q 009427 108 VGTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGR 146 (535)
Q Consensus 108 ~~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~ 146 (535)
+.+|||+||| |..|+.+|..|++.|.+|++|||+..-++
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGG 45 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccC
Confidence 3479999999 99999999999999999999999965443
No 269
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.57 E-value=0.0013 Score=71.88 Aligned_cols=34 Identities=29% Similarity=0.584 Sum_probs=31.8
Q ss_pred CcccEEEEc-chHHHHHHHHHHH-CCCcEEEEcccC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSF-KGLRVAIVERNT 142 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr-~G~~V~liEr~~ 142 (535)
.+||+|||| |++|+++|..|++ .|.+|+|||++.
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 369999999 9999999999999 799999999984
No 270
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.57 E-value=0.011 Score=58.86 Aligned_cols=88 Identities=20% Similarity=0.139 Sum_probs=63.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|.++++.+... . .
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-------------------~-~---------------------- 197 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-------------------A-S---------------------- 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC-------------------S-C----------------------
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC-------------------c-c----------------------
Confidence 4799999 9999999999999999999999873100 0 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHH-HHhCCCEEEeCceEEEEEEeCC--eEE-EEEc---CC--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKR-FISLGGVIFEGYSVSSICTYEN--AAV-LLLA---EG--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~-a~~~G~~i~~~~~V~~i~~~~~--gv~-v~~~---~G--~~i~a~lVV~AdG~ 259 (535)
+.+.++ ..+.|++++.+++++++..+++ .+. +.+. +| .++.+|.||.|+|.
T Consensus 198 -------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 198 -------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp -------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred -------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 011222 2356899999999999976553 322 3332 34 57999999999994
No 271
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.51 E-value=0.0014 Score=71.01 Aligned_cols=33 Identities=42% Similarity=0.615 Sum_probs=31.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHC-CCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFK-GLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~-G~~V~liEr~~ 142 (535)
+||+|||| |++|+++|..|++. |.+|+|||++.
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~ 47 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGP 47 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 69999999 99999999999998 99999999984
No 272
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.51 E-value=0.011 Score=57.38 Aligned_cols=151 Identities=13% Similarity=0.063 Sum_probs=96.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |+.|+-+|..|++.| +|.++++... .+ .
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~--------------------~~-~---------------------- 177 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV--------------------EP-D---------------------- 177 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC--------------------CC-C----------------------
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC--------------------CC-C----------------------
Confidence 4799999 999999999999999 9999987621 00 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCChHHHHHhCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQAFP 269 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~S~v~~~~~p 269 (535)
+.+.+.+.+.|++++. ++|+++. +++ .+.+.+|+++.+|.||.|+|.. |
T Consensus 178 -------------------~~~~~~l~~~gv~i~~-~~v~~i~--~~~-~v~~~~g~~~~~D~vi~a~G~~--------p 226 (297)
T 3fbs_A 178 -------------------ADQHALLAARGVRVET-TRIREIA--GHA-DVVLADGRSIALAGLFTQPKLR--------I 226 (297)
T ss_dssp -------------------HHHHHHHHHTTCEEEC-SCEEEEE--TTE-EEEETTSCEEEESEEEECCEEE--------C
T ss_pred -------------------HHHHHHHHHCCcEEEc-ceeeeee--cCC-eEEeCCCCEEEEEEEEEccCcc--------c
Confidence 1123344567899885 8898884 333 5677788899999999999942 1
Q ss_pred CCCCCCCceeEEEEEecCCCCCCChHHHHHHHhhhccCccCCCCCccchhcchhc-cccCCCCCCCCccCCCeeEeecCC
Q 009427 270 AGSGPLDRTTYMFTYIDPQAGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYG-IFPTYRDSPLPAAFNRILQFGDAS 348 (535)
Q Consensus 270 ~~~~~~~~~~~~~~y~~~~~~~~~l~~~~~~~~~~~P~~~~~~~~~~~~~r~~~g-~~P~~~~~pl~~~~~rvlliGDAA 348 (535)
.. . + +... . ...+. ...| .+.... .+.+..++++++||++
T Consensus 227 ~~-------~----~---------~~~~-----g-------~~~~~-----~~~G~~i~vd~--~~~t~~~~vya~GD~~ 267 (297)
T 3fbs_A 227 TV-------D----W---------IEKL-----G-------CAVEE-----GPMGSTIVTDP--MKQTTARGIFACGDVA 267 (297)
T ss_dssp CC-------S----C---------HHHH-----T-------CCEEE-----ETTEEEECCCT--TCBCSSTTEEECSGGG
T ss_pred Cc-------h----h---------HHhc-----C-------Ccccc-----CCCCceEEeCC--CCccCCCCEEEEeecC
Confidence 10 0 0 0000 0 00000 0001 111111 1223358899999999
Q ss_pred CcccccccccchHHHHHHHHHHHHHHHHHhCC
Q 009427 349 GIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGD 380 (535)
Q Consensus 349 ~~~~P~~G~Gi~~al~da~~La~~l~~al~~~ 380 (535)
+. | .....|+.++..+|..|.+.+..+
T Consensus 268 ~~--~---~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 268 RP--A---GSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp CT--T---CCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred Cc--h---HHHHHHHHhHHHHHHHHHHHHhhh
Confidence 85 2 345678889999999888877643
No 273
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.49 E-value=0.0085 Score=64.07 Aligned_cols=116 Identities=16% Similarity=0.173 Sum_probs=70.6
Q ss_pred HHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEE--cCC----eEEEcCeEEEccCCCh-HHHHHhCCCCCCCCCceeEE
Q 009427 209 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEG----KILSSHLIIDAMGNFS-PVVKQAFPAGSGPLDRTTYM 281 (535)
Q Consensus 209 ~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~--~~G----~~i~a~lVV~AdG~~S-~v~~~~~p~~~~~~~~~~~~ 281 (535)
+.+.+.+++.|++++.+++|+++ +++++++.+ .|| +++.||+||.|+|... ++.....
T Consensus 276 ~~~~~~L~~~GV~v~~~~~v~~v--~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~------------- 340 (502)
T 4g6h_A 276 SYAQSHLENTSIKVHLRTAVAKV--EEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLF------------- 340 (502)
T ss_dssp HHHHHHHHHTTCEEETTEEEEEE--CSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHH-------------
T ss_pred HHHHHHHHhcceeeecCceEEEE--eCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHH-------------
Confidence 55666777889999999999998 456665544 455 3699999999999521 1111100
Q ss_pred EEEecCCCCCCChHHHHHHHhhhccCccCCCCCccchhcchhccccCCCCCCCCcc-CCCeeEeecCCCcccccccccch
Q 009427 282 FTYIDPQAGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFG 360 (535)
Q Consensus 282 ~~y~~~~~~~~~l~~~~~~~~~~~P~~~~~~~~~~~~~r~~~g~~P~~~~~pl~~~-~~rvlliGDAA~~~~P~~G~Gi~ 360 (535)
. -.+... +. .|.+.... .+++. .++|+++||+|..-.|-++|
T Consensus 341 -----------------~----~~~~~~----~~-------~g~I~Vd~--~lq~~~~~~IfAiGD~a~~~~p~~a~--- 383 (502)
T 4g6h_A 341 -----------------K----KIPEQN----SS-------KRGLAVND--FLQVKGSNNIFAIGDNAFAGLPPTAQ--- 383 (502)
T ss_dssp -----------------H----HSGGGT----TC-------CSSEEBCT--TSBBTTCSSEEECGGGEESSSCCCHH---
T ss_pred -----------------H----hccccc----cC-------CCceeECC--ccccCCCCCEEEEEcccCCCCCCchH---
Confidence 0 000000 00 01111110 12222 47899999999887777665
Q ss_pred HHHHHHHHHHHHHHHH
Q 009427 361 SLTRHLGRLSTGVYEA 376 (535)
Q Consensus 361 ~al~da~~La~~l~~a 376 (535)
.|.+.+..+|+.|...
T Consensus 384 ~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 384 VAHQEAEYLAKNFDKM 399 (502)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4788888888877654
No 274
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.48 E-value=0.002 Score=75.08 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=31.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGL-RVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~ 142 (535)
.+||+||| ||+|+++|..|++.|+ +|+|+|+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE 221 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 58999999 9999999999999999 799999974
No 275
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.39 E-value=0.0019 Score=68.24 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=31.3
Q ss_pred cccEEEEc-chHHHHHHHHHHH-C------CCcEEEEcccCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSF-K------GLRVAIVERNTL 143 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr-~------G~~V~liEr~~~ 143 (535)
.+||+||| |++|+.+|..|++ . |++|+|||+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 48999999 9999999999999 7 999999999853
No 276
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.39 E-value=0.0023 Score=67.72 Aligned_cols=34 Identities=29% Similarity=0.408 Sum_probs=31.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCC--CcEEEEcccCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKG--LRVAIVERNTL 143 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G--~~V~liEr~~~ 143 (535)
.+||+||| |++|+.+|..|++.| ++|+|||+.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 42 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 58999999 999999999999998 99999999853
No 277
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.36 E-value=0.027 Score=60.85 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=30.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-.|+||| |.+|+-+|..|++.|.+|+|++|.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 4799999 9999999999999999999999985
No 278
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.34 E-value=0.0018 Score=66.79 Aligned_cols=81 Identities=23% Similarity=0.259 Sum_probs=59.4
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCcccccccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (535)
.|+||| |..|+-+|..|++.|.+|+|+|+.+.... ..++
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~-----------------~~~~----------------------- 187 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE-----------------RQLD----------------------- 187 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT-----------------TTSC-----------------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch-----------------hhcC-----------------------
Confidence 699999 99999999999999999999998731100 0000
Q ss_pred cceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 191 ~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.+++.|++++.+++|+++ |+++.+|.||.|+|.
T Consensus 188 --------------~~~~~~~~~~l~~~gV~~~~~~~v~~i-------------g~~~~~D~vv~a~G~ 229 (385)
T 3klj_A 188 --------------RDGGLFLKDKLDRLGIKIYTNSNFEEM-------------GDLIRSSCVITAVGV 229 (385)
T ss_dssp --------------HHHHHHHHHHHHTTTCEEECSCCGGGC-------------HHHHHHSEEEECCCE
T ss_pred --------------HHHHHHHHHHHHhCCCEEEeCCEEEEc-------------CeEEecCeEEECcCc
Confidence 011133455566778999988877665 456889999999994
No 279
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.31 E-value=0.056 Score=58.20 Aligned_cols=32 Identities=25% Similarity=0.263 Sum_probs=30.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-.|+||| |.+|+-+|..|++.|.+|+|++|.+
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTP 211 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 4799999 9999999999999999999999984
No 280
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.17 E-value=0.012 Score=58.72 Aligned_cols=88 Identities=19% Similarity=0.114 Sum_probs=62.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++++..... . .
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~-------------------~--------------~--------- 193 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR-------------------A--------------S--------- 193 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS-------------------S--------------C---------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC-------------------c--------------c---------
Confidence 4799999 9999999999999999999999862100 0 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHH-HHhCCCEEEeCceEEEEEEeCC--eEEEEE-cCC--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKR-FISLGGVIFEGYSVSSICTYEN--AAVLLL-AEG--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~-a~~~G~~i~~~~~V~~i~~~~~--gv~v~~-~~G--~~i~a~lVV~AdG~ 259 (535)
+.+.++ ..+.|++++.+++|+++..+++ ++++.. .+| .++.+|.||.|+|.
T Consensus 194 -------------------~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 194 -------------------KIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp -------------------TTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred -------------------HHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 001112 2346899999999999864432 244432 134 57999999999994
No 281
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.03 E-value=0.038 Score=58.23 Aligned_cols=37 Identities=8% Similarity=-0.015 Sum_probs=28.0
Q ss_pred CCeeEeecCCCccccccccc-chHHHHHHHHHHHHHHHHHhCC
Q 009427 339 NRILQFGDASGIQSPVSFGG-FGSLTRHLGRLSTGVYEAVRGD 380 (535)
Q Consensus 339 ~rvlliGDAA~~~~P~~G~G-i~~al~da~~La~~l~~al~~~ 380 (535)
++++++||++.. | .| +..++.++..++..|...+..+
T Consensus 360 p~vya~Gd~~~g--~---~~~i~~a~~~g~~aa~~i~~~l~~~ 397 (460)
T 1cjc_A 360 PGLYCSGWVKRG--P---TGVITTTMTDSFLTGQILLQDLKAG 397 (460)
T ss_dssp TTEEECTHHHHC--T---TCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeCCcC--C---CccHHHHHHHHHHHHHHHHHHHHhC
Confidence 689999999842 2 23 4578999999999888777544
No 282
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.89 E-value=0.037 Score=59.34 Aligned_cols=88 Identities=17% Similarity=0.078 Sum_probs=63.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |..|+-+|..|++.|.+|+++++.+.... +
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~--------------------~---------------------- 393 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA--------------------D---------------------- 393 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS--------------------C----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc--------------------C----------------------
Confidence 3799999 99999999999999999999997621000 0
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHh-CCCEEEeCceEEEEEEeCCeE-EEEEc---CC--eEEEcCeEEEccCC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLA---EG--KILSSHLIIDAMGN 259 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~G~~i~~~~~V~~i~~~~~gv-~v~~~---~G--~~i~a~lVV~AdG~ 259 (535)
..+.+++.+ .|++++.++.++++..+++.+ .+.+. +| .++.+|.||.|.|.
T Consensus 394 -------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 394 -------------------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp -------------------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred -------------------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 112233344 488999999999987654443 24443 34 36899999999994
No 283
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.66 E-value=0.0045 Score=68.79 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=30.9
Q ss_pred cccEEEEc-chHHHHHHHHHHHCC--------CcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKG--------LRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G--------~~V~liEr~~ 142 (535)
..+|+||| |++|+++|+.|++.| ++|+|+|+..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 47999999 999999999999999 9999999875
No 284
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.63 E-value=0.044 Score=59.14 Aligned_cols=32 Identities=22% Similarity=0.275 Sum_probs=30.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-.|+||| |.+|+-+|..|++.|.+|++++|.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 4799999 9999999999999999999999985
No 285
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.57 E-value=0.031 Score=61.81 Aligned_cols=48 Identities=19% Similarity=0.317 Sum_probs=37.7
Q ss_pred HHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCC--eEEEcCeEEEccCC
Q 009427 209 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGN 259 (535)
Q Consensus 209 ~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G--~~i~a~lVV~AdG~ 259 (535)
..+.+.+.+.|++++.+++|+++. +++++++ .+| +++.+|.||.|.|.
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~ 626 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQ 626 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCc
Confidence 344566677899999999999984 5666665 567 57999999999994
No 286
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.42 E-value=0.043 Score=57.79 Aligned_cols=31 Identities=32% Similarity=0.504 Sum_probs=27.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHC--------------------CC-cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFK--------------------GL-RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~--------------------G~-~V~liEr~ 141 (535)
-.|+||| |..|+-+|..|++. |. +|.|++|.
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~ 200 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRR 200 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecC
Confidence 4799999 99999999999974 64 89999987
No 287
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.03 E-value=0.051 Score=62.78 Aligned_cols=86 Identities=16% Similarity=0.184 Sum_probs=63.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHHHhhhcCCCccccccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~~~ 189 (535)
-.|+||| |+.|+-+|..|++.|.+|+|+|+.+. + ..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~---------------------~-~~--------------------- 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSS---------------------I-SA--------------------- 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS---------------------C-CH---------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc---------------------c-ch---------------------
Confidence 3699999 99999999999999999999998621 0 00
Q ss_pred CcceeeeccccccCHHHHHHHHHHHHHhCCCEEEeCceEEEEEEe-CCeE-EEEEcC-------C--eEEEcCeEEEccC
Q 009427 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY-ENAA-VLLLAE-------G--KILSSHLIIDAMG 258 (535)
Q Consensus 190 ~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~-~~gv-~v~~~~-------G--~~i~a~lVV~AdG 258 (535)
. .+.+++.|++++.++.|+++..+ ++++ .|.+.+ | +++.+|.||.|.|
T Consensus 322 -------------------~--~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G 380 (965)
T 2gag_A 322 -------------------A--AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGG 380 (965)
T ss_dssp -------------------H--HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECC
T ss_pred -------------------h--HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCC
Confidence 0 12345678999999999998753 3332 233332 4 5799999999999
Q ss_pred CC
Q 009427 259 NF 260 (535)
Q Consensus 259 ~~ 260 (535)
..
T Consensus 381 ~~ 382 (965)
T 2gag_A 381 FN 382 (965)
T ss_dssp EE
T ss_pred cC
Confidence 64
No 288
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.96 E-value=0.18 Score=58.53 Aligned_cols=30 Identities=40% Similarity=0.362 Sum_probs=28.5
Q ss_pred cEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
.|+||| |..|+-+|..+++.|. +|+|+++.
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~ 365 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRK 365 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEec
Confidence 799999 9999999999999997 89999987
No 289
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.78 E-value=0.038 Score=48.01 Aligned_cols=31 Identities=16% Similarity=0.437 Sum_probs=29.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+||| |..|..+|..|.+.|++|+++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4699999 999999999999999999999987
No 290
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.70 E-value=0.18 Score=49.22 Aligned_cols=31 Identities=29% Similarity=0.338 Sum_probs=29.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+||| |..|+-+|..|++.|.+|+|+|+.
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~ 184 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRR 184 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccc
Confidence 4699999 999999999999999999999986
No 291
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.37 E-value=0.13 Score=54.09 Aligned_cols=31 Identities=16% Similarity=0.021 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+||| |.+|+-+|..|++.|.+|+|+++.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~ 229 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYR 229 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECS
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEEC
Confidence 4699999 999999999999999999999976
No 292
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.35 E-value=0.052 Score=56.76 Aligned_cols=31 Identities=13% Similarity=0.005 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCc-EEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLR-VAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~-V~liEr~ 141 (535)
-+|+||| |.+|+-+|..|++.|.+ |+|+++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~ 245 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLG 245 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCC
Confidence 4799999 99999999999999999 9999986
No 293
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=94.21 E-value=0.11 Score=54.80 Aligned_cols=32 Identities=22% Similarity=0.229 Sum_probs=28.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCc-EEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLR-VAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~-V~liEr~~ 142 (535)
-+|+||| |.+|+-+|..+.+.|.+ |++++|..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 4799999 99999999999999985 99999873
No 294
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=93.98 E-value=0.31 Score=50.01 Aligned_cols=47 Identities=15% Similarity=0.256 Sum_probs=37.0
Q ss_pred HHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCC
Q 009427 209 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (535)
Q Consensus 209 ~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~ 259 (535)
+.+.+.+.+.|++++.+++|++++ +++ +.+++|+++.+|.||.|.|.
T Consensus 222 ~~~~~~l~~~gV~~~~~~~v~~i~--~~~--v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 222 KAVASIYNQLGIKLVHNFKIKEIR--EHE--IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHTCEEECSCCEEEEC--SSE--EEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHCCCEEEcCCceEEEC--CCe--EEECCCCEEeeeEEEECCCC
Confidence 345555667799999999999984 444 55678889999999999994
No 295
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=93.82 E-value=0.18 Score=56.21 Aligned_cols=32 Identities=22% Similarity=0.179 Sum_probs=28.5
Q ss_pred ccEEEEc---chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG---GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG---G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-.|+||| |..|+-+|..|++.|.+|+|+++..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 3699994 6999999999999999999999873
No 296
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.66 E-value=0.067 Score=47.19 Aligned_cols=32 Identities=34% Similarity=0.561 Sum_probs=29.8
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-.|+|+| |..|..+|..|.+.|++|+++|+++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4799999 9999999999999999999999873
No 297
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.64 E-value=0.065 Score=46.25 Aligned_cols=31 Identities=26% Similarity=0.501 Sum_probs=29.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |..|..+|..|++.|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 3699999 999999999999999999999987
No 298
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=93.52 E-value=0.43 Score=49.48 Aligned_cols=49 Identities=12% Similarity=0.104 Sum_probs=36.4
Q ss_pred HHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEE--cC-----CeEEEcCeEEEccCC
Q 009427 209 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AE-----GKILSSHLIIDAMGN 259 (535)
Q Consensus 209 ~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~--~~-----G~~i~a~lVV~AdG~ 259 (535)
+.+.+.+.+.|++++.+++|+++ +++++++.. .+ +.++.+|++|.|.|.
T Consensus 212 ~~~~~~l~~~gI~~~~~~~v~~v--~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 212 GILTKGLKEEGIEAYTNCKVTKV--EDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEE--ETTEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHCCCEEEcCCEEEEE--ECCeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 34555666789999999999998 456666553 22 467999999999883
No 299
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=93.49 E-value=0.065 Score=55.90 Aligned_cols=35 Identities=31% Similarity=0.506 Sum_probs=32.5
Q ss_pred CCcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 108 VGTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 108 ~~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
+.++||+||| |++|+++|+.|+++|++|+|+|++.
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~ 39 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNP 39 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 3469999999 9999999999999999999999974
No 300
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.44 E-value=0.069 Score=45.57 Aligned_cols=31 Identities=29% Similarity=0.602 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|+|+| |..|..+|..|++.|++|.++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4799999 999999999999999999999986
No 301
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=93.35 E-value=0.13 Score=53.88 Aligned_cols=36 Identities=28% Similarity=0.457 Sum_probs=33.1
Q ss_pred CcccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCC
Q 009427 109 GTFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLK 144 (535)
Q Consensus 109 ~~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~ 144 (535)
.++|||||| |++|+++|+.|+++|++|+|+|++...
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHY 46 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 469999999 999999999999999999999998543
No 302
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=93.25 E-value=0.18 Score=50.06 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=27.8
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+||| |..|+-+|..|++.| +|+++++.
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 4799999 999999999999999 79999886
No 303
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=92.59 E-value=0.56 Score=48.51 Aligned_cols=49 Identities=8% Similarity=0.006 Sum_probs=36.8
Q ss_pred HHHHHHHHhCCCEEEeCceEEEEEEeCCeEEEEEc--CCeEEEcCeEEEccCC
Q 009427 209 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA--EGKILSSHLIIDAMGN 259 (535)
Q Consensus 209 ~~L~~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~--~G~~i~a~lVV~AdG~ 259 (535)
+.+.+.+++.|++++.+++|+++ ++++++++.. +++++.+|.||.|.|.
T Consensus 204 ~~l~~~l~~~GV~i~~~~~v~~v--~~~~v~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 204 RLVEDLFAERNIDWIANVAVKAI--EPDKVIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEE--CSSEEEEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEE--eCCeEEEEecCCCceEEeeeEEEECCCC
Confidence 44556677889999999999998 3455554431 1678999999999984
No 304
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.49 E-value=0.12 Score=45.37 Aligned_cols=31 Identities=29% Similarity=0.450 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |..|..+|..|.+.|++|+++|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3699999 999999999999999999999986
No 305
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.07 E-value=0.11 Score=46.97 Aligned_cols=31 Identities=23% Similarity=0.262 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHC-CCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFK-GLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~-G~~V~liEr~ 141 (535)
-.|+|+| |..|..+|..|.+. |++|+++|++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 3699999 99999999999999 9999999987
No 306
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=91.80 E-value=0.15 Score=53.60 Aligned_cols=33 Identities=39% Similarity=0.465 Sum_probs=30.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGL-RVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~ 142 (535)
.+||+||| |++|+++|+.|++.|+ +|+|+|+..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~ 38 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATD 38 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCC
Confidence 58999999 9999999999999999 899999974
No 307
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.45 E-value=0.16 Score=43.45 Aligned_cols=30 Identities=33% Similarity=0.381 Sum_probs=28.5
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|+|+| |..|..+|..|.+.|++|.++|++
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 599999 999999999999999999999986
No 308
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=91.10 E-value=0.17 Score=41.53 Aligned_cols=31 Identities=26% Similarity=0.584 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCC-CcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKG-LRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G-~~V~liEr~ 141 (535)
..|+|+| |..|..+|..|.+.| ++|.+++|+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4699999 999999999999999 999999986
No 309
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.10 E-value=0.18 Score=50.32 Aligned_cols=31 Identities=29% Similarity=0.443 Sum_probs=29.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|.||| |..|...|..+|..|++|+|+|.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 4699999 999999999999999999999986
No 310
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=90.75 E-value=0.15 Score=50.11 Aligned_cols=30 Identities=30% Similarity=0.318 Sum_probs=28.9
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|+||| |..|+-+|..|++.|.+|+|+|+.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 177 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRR 177 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecc
Confidence 699999 999999999999999999999986
No 311
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.33 E-value=0.23 Score=46.35 Aligned_cols=30 Identities=23% Similarity=0.476 Sum_probs=28.6
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|+||| |..|..+|..|.+.|++|+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 489999 999999999999999999999987
No 312
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=90.28 E-value=2 Score=45.93 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=29.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-.|+||| |..|+-+|..|++.|.+|++++|.+
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 4699999 9999999999999999999999874
No 313
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.92 E-value=0.26 Score=48.58 Aligned_cols=30 Identities=33% Similarity=0.489 Sum_probs=28.7
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|.||| |..|...|..|++.|++|+++|++
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 599999 999999999999999999999987
No 314
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=89.65 E-value=0.52 Score=49.42 Aligned_cols=60 Identities=20% Similarity=0.214 Sum_probs=42.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCCCCCcccccccHHHHHHHHHcCCCChHhHHHH
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEA 174 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~~~~~~~~~is~~~l~~L~~lGl~~~~~~~~~ 174 (535)
-.|.||| |..|...|..|++.|++|+++|+++- +..+.....++.+.+.|.++.++.+..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e----~a~~~i~~~l~~~~~~G~l~~~~~~~~ 115 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ----RCKQELEVMYAREKSFKRLNDKRIEKI 115 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH----HHHHHHHHHHHHHHHTTSCCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH----HHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 4699999 99999999999999999999998842 111112234556666676665544443
No 315
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.56 E-value=0.29 Score=47.81 Aligned_cols=30 Identities=40% Similarity=0.577 Sum_probs=28.7
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|.||| |..|...|..|++.|++|.++|++
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 599999 999999999999999999999987
No 316
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=89.45 E-value=0.3 Score=51.05 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=30.2
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
...+.||| |..|+.+|..+|+.|++|+.+|-+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 46899999 999999999999999999999987
No 317
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=89.42 E-value=0.29 Score=51.71 Aligned_cols=32 Identities=19% Similarity=0.450 Sum_probs=30.2
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
...|.||| |..|+.+|..|++.|++|+++|++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46899999 999999999999999999999986
No 318
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.86 E-value=0.36 Score=48.23 Aligned_cols=31 Identities=29% Similarity=0.443 Sum_probs=29.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|.||| |..|...|..|++.|++|.++|++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4699999 999999999999999999999987
No 319
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=88.44 E-value=0.4 Score=50.18 Aligned_cols=33 Identities=21% Similarity=0.425 Sum_probs=30.9
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
...+.||| |..|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999 9999999999999999999999984
No 320
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=88.39 E-value=0.31 Score=51.11 Aligned_cols=32 Identities=25% Similarity=0.232 Sum_probs=29.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-.|.||| |.+|+++|..|+++|++|.+.|++.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3699999 9999999999999999999999863
No 321
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=87.95 E-value=0.28 Score=51.20 Aligned_cols=32 Identities=16% Similarity=0.379 Sum_probs=29.5
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccCC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTL 143 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~ 143 (535)
.|+||| |.+|+++|..|+++|++|.+.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 599999 99999999999999999999998743
No 322
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.67 E-value=0.39 Score=46.06 Aligned_cols=33 Identities=24% Similarity=0.478 Sum_probs=30.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccCC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~~ 143 (535)
..|+||| |-.|..+|..|++.|. +++|+|++.+
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 5799999 9999999999999998 7999999854
No 323
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.51 E-value=0.48 Score=49.09 Aligned_cols=31 Identities=23% Similarity=0.580 Sum_probs=29.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.||||| |..|..+|..|.+.|++|++||++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4699999 999999999999999999999998
No 324
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.41 E-value=0.47 Score=47.16 Aligned_cols=31 Identities=32% Similarity=0.658 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|.+.|..|++.|++|.+++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3699999 999999999999999999999986
No 325
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=87.27 E-value=0.46 Score=49.78 Aligned_cols=30 Identities=30% Similarity=0.544 Sum_probs=28.8
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|.||| |..|+.+|..|++.|++|+++|++
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECC
Confidence 699999 999999999999999999999987
No 326
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.17 E-value=0.51 Score=45.63 Aligned_cols=31 Identities=35% Similarity=0.373 Sum_probs=28.9
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.|.||| |..|...|..|++.|++|.+++|+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 489999 9999999999999999999999874
No 327
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.61 E-value=0.6 Score=43.30 Aligned_cols=32 Identities=19% Similarity=0.436 Sum_probs=29.8
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
..|.||| |..|.+.|..|++.|++|.+++|.+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5799999 9999999999999999999999873
No 328
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.57 E-value=0.57 Score=45.86 Aligned_cols=31 Identities=19% Similarity=0.454 Sum_probs=28.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|...|..|++.|++|.+++|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 3699999 999999999999999999999986
No 329
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=86.48 E-value=0.55 Score=46.25 Aligned_cols=31 Identities=29% Similarity=0.412 Sum_probs=28.8
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
+-.|.||| |..|...|..|+ .|++|+++|+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~ 43 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVS 43 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECC
Confidence 35799999 999999999999 99999999986
No 330
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=86.42 E-value=0.54 Score=46.48 Aligned_cols=31 Identities=26% Similarity=0.547 Sum_probs=28.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |-.|.+.|..|++.|++|.+++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 3699999 999999999999999999999986
No 331
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=86.03 E-value=0.74 Score=45.47 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=30.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
..|.||| |..|...|..|++.|++|.++++++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 5799999 9999999999999999999999873
No 332
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=85.96 E-value=0.65 Score=46.43 Aligned_cols=31 Identities=19% Similarity=0.553 Sum_probs=28.8
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|.+.|..|++.|++|.+++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 4699999 999999999999999999999874
No 333
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=85.91 E-value=0.54 Score=48.99 Aligned_cols=30 Identities=30% Similarity=0.421 Sum_probs=28.4
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|.||| |..|+.+|..|++.|++|+++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 488999 999999999999999999999986
No 334
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=85.76 E-value=0.56 Score=49.32 Aligned_cols=31 Identities=39% Similarity=0.453 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|.||| |..|..+|..|++.|++|+++|++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3699999 999999999999999999999987
No 335
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=85.50 E-value=0.58 Score=49.38 Aligned_cols=32 Identities=28% Similarity=0.297 Sum_probs=30.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHC-CC-cEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFK-GL-RVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~-G~-~V~liEr~~ 142 (535)
..|.||| |..|+.+|..|++. |+ +|+++|++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4799999 99999999999999 99 999999884
No 336
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=85.48 E-value=1.2 Score=46.61 Aligned_cols=34 Identities=32% Similarity=0.508 Sum_probs=31.9
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNTL 143 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~~ 143 (535)
.+||+||| |++|+++|+.|+++|++|+|+|+...
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 45 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTR 45 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCC
Confidence 68999999 99999999999999999999999853
No 337
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=85.29 E-value=1.7 Score=42.29 Aligned_cols=30 Identities=7% Similarity=0.095 Sum_probs=23.6
Q ss_pred cEEEEc-c-hHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-G-TLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G-~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.++||| | .+++.+|..+++.|.+|+++++.
T Consensus 148 ~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~ 179 (304)
T 4fk1_A 148 PLIIISENEDHTLHMTKLVYNWSTDLVIATNG 179 (304)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCSCEEEECSS
T ss_pred ceeeecCCCchhhhHHHHHHhCCceEEEEecc
Confidence 577777 6 45678888888889999999775
No 338
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=85.14 E-value=0.62 Score=48.51 Aligned_cols=31 Identities=26% Similarity=0.377 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
...-||| |..|+.+|..|++.|++|+++|++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~ 43 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDIN 43 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4688999 999999999999999999999987
No 339
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=85.13 E-value=0.72 Score=46.00 Aligned_cols=32 Identities=16% Similarity=0.146 Sum_probs=28.7
Q ss_pred ccEEEEc-chHHHH-HHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIF-IATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~-~A~~LAr~G~~V~liEr~~ 142 (535)
-.|.||| |.+|++ +|..|.++|++|.+.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3699999 999996 8889999999999999873
No 340
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=85.07 E-value=0.73 Score=47.43 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=29.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|+|+| |++|+.+|..|...|.+|+++|+.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 222 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVR 222 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 5799999 999999999999999999999987
No 341
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=84.83 E-value=0.79 Score=44.60 Aligned_cols=31 Identities=29% Similarity=0.366 Sum_probs=29.0
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.|.||| |..|...|..|++.|++|.+++|++
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 589999 9999999999999999999999873
No 342
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=84.65 E-value=0.79 Score=45.25 Aligned_cols=31 Identities=23% Similarity=0.422 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC--cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL--RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~ 141 (535)
..|+||| |..|..+|..|++.|+ +|.++|++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4799999 9999999999999999 99999986
No 343
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=84.62 E-value=0.79 Score=45.04 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|...|..|++.|++|.+++++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 4699999 999999999999999999999986
No 344
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=84.51 E-value=12 Score=39.46 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=27.6
Q ss_pred cEEEEc-chHHHHHHHHHHHC--CCcEEEEcccC
Q 009427 112 DVIVCG-GTLGIFIATALSFK--GLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~~ 142 (535)
.|+||| |-+|.-+|..|++. +.+|.++=|.+
T Consensus 248 rV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 248 NIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 599999 99999999999875 78999998873
No 345
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=83.99 E-value=0.67 Score=45.46 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=29.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
..|.||| |..|...|..|++.|++|.++++++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4799999 9999999999999999999999874
No 346
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=83.91 E-value=0.87 Score=45.53 Aligned_cols=31 Identities=29% Similarity=0.284 Sum_probs=29.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|...|..|++.|++|.+++|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4699999 999999999999999999999986
No 347
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=83.86 E-value=0.35 Score=41.87 Aligned_cols=31 Identities=29% Similarity=0.496 Sum_probs=28.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+||| |..|..+|..|++.|.+|.+++|.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 3699999 999999999999999999999986
No 348
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=83.83 E-value=0.88 Score=48.09 Aligned_cols=30 Identities=33% Similarity=0.439 Sum_probs=28.8
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|.||| |..|...|..|++.|++|+++|++
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~ 37 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDIS 37 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECC
Confidence 599999 999999999999999999999987
No 349
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=83.82 E-value=0.65 Score=45.46 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=29.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |-.|.+.|..|++.|.+|.+++|.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 3699999 999999999999999999999987
No 350
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=83.66 E-value=0.94 Score=43.05 Aligned_cols=32 Identities=38% Similarity=0.480 Sum_probs=29.8
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
...|.||| |-.|.++|..|++.|++|.+.+|+
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35799999 999999999999999999999987
No 351
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=83.65 E-value=0.77 Score=46.85 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=29.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |.+|..+|..|...|.+|+++|+.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999 999999999999999999999987
No 352
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=83.65 E-value=1.3 Score=43.62 Aligned_cols=31 Identities=48% Similarity=0.723 Sum_probs=29.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|...|..|++.|++|.+++|+
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999 999999999999999999999987
No 353
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=83.58 E-value=0.96 Score=45.09 Aligned_cols=32 Identities=28% Similarity=0.415 Sum_probs=29.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
+..|.||| |..|.+.|..|++.|++|.+++|.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 36799999 999999999999999999999886
No 354
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=83.40 E-value=0.77 Score=44.65 Aligned_cols=31 Identities=29% Similarity=0.363 Sum_probs=29.0
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.|.||| |..|...|..|++.|++|.+++|++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 589999 9999999999999999999999873
No 355
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=83.36 E-value=0.97 Score=44.85 Aligned_cols=31 Identities=23% Similarity=0.427 Sum_probs=29.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|...|..|++.|++|.++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 5799999 999999999999999999999987
No 356
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=83.31 E-value=0.81 Score=47.59 Aligned_cols=30 Identities=13% Similarity=0.299 Sum_probs=28.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|+.+|..|++ |++|+++|++
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecC
Confidence 5799999 9999999999998 9999999987
No 357
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=83.25 E-value=0.63 Score=45.36 Aligned_cols=31 Identities=19% Similarity=0.388 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+||| |-.|...|..|.+.|.+|+|+++.
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4699999 999999999999999999999976
No 358
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=83.15 E-value=0.91 Score=42.80 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+||| |..|...|..|.+.|.+|+|+++.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4699999 999999999999999999999875
No 359
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=83.11 E-value=2.7 Score=45.91 Aligned_cols=55 Identities=15% Similarity=0.114 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHhCCCEEEeCceEEEEEEeC--CeEE-EEEcCCeEEEcCeEEEccC
Q 009427 204 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYE--NAAV-LLLAEGKILSSHLIIDAMG 258 (535)
Q Consensus 204 ~~~l~~~L~~~a~~~G~~i~~~~~V~~i~~~~--~gv~-v~~~~G~~i~a~lVV~AdG 258 (535)
...+.+.|.+.+...|++++.+++|.+|..++ +.++ |...+|++++|+.||....
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh
Confidence 35788899999999999999999999998877 4444 3345689999999987443
No 360
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=82.99 E-value=0.84 Score=45.23 Aligned_cols=29 Identities=28% Similarity=0.337 Sum_probs=27.6
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVER 140 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr 140 (535)
.|.||| |..|...|..|++.|++|.+++|
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 488999 99999999999999999999998
No 361
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=82.79 E-value=1 Score=45.63 Aligned_cols=31 Identities=26% Similarity=0.430 Sum_probs=29.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|.+.|..|++.|++|.+++|+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4799999 999999999999999999999986
No 362
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=82.64 E-value=0.96 Score=44.24 Aligned_cols=31 Identities=23% Similarity=0.316 Sum_probs=29.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|...|..|++.|++|.+++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 4699999 999999999999999999999987
No 363
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=82.64 E-value=1.6 Score=45.80 Aligned_cols=32 Identities=19% Similarity=0.478 Sum_probs=29.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-.|+||| |..|+-+|..|++.|.+|.++++..
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 4799999 9999999999999999999999874
No 364
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=82.62 E-value=1.1 Score=44.23 Aligned_cols=30 Identities=37% Similarity=0.560 Sum_probs=28.2
Q ss_pred cEEEEc-chHHHHHHHHHHHCCC--cEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGL--RVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~ 141 (535)
.|.||| |..|.++|..|+..|+ +|.++|++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 489999 9999999999999999 99999986
No 365
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=82.51 E-value=1.2 Score=41.41 Aligned_cols=31 Identities=32% Similarity=0.388 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |-.|...|..|++.|++|.+++|+
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4699999 999999999999999999999886
No 366
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=82.45 E-value=1.1 Score=44.45 Aligned_cols=31 Identities=26% Similarity=0.329 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
..|.||| |..|..+|..|++.|+ +|.++|++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4699999 9999999999999998 99999987
No 367
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=82.35 E-value=1.1 Score=44.71 Aligned_cols=31 Identities=29% Similarity=0.357 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
..|.||| |..|..+|..|++.|+ +|.++|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4799999 9999999999999999 99999987
No 368
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=82.34 E-value=1 Score=45.01 Aligned_cols=31 Identities=19% Similarity=0.285 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
..|.||| |-.|..+|..|++.|+ +|.|+|++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4799999 9999999999999998 99999987
No 369
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=82.29 E-value=1.1 Score=46.16 Aligned_cols=31 Identities=26% Similarity=0.302 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |.+|+.+|..+...|.+|+++|+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~ 204 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTR 204 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4699999 999999999999999999999987
No 370
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.15 E-value=0.56 Score=49.28 Aligned_cols=31 Identities=26% Similarity=0.488 Sum_probs=29.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|||+| |-.|..+|..|...|++|+|||++
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 5799999 999999999999999999999998
No 371
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=82.11 E-value=1.1 Score=45.32 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=29.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|..+|..|++.|++|.++++.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 5799999 999999999999999999999987
No 372
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=81.75 E-value=0.86 Score=46.91 Aligned_cols=29 Identities=31% Similarity=0.481 Sum_probs=27.3
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|.||| |..|+.+|..|++ |++|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECC
Confidence 488999 9999999999999 9999999986
No 373
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=81.72 E-value=1.2 Score=44.21 Aligned_cols=30 Identities=23% Similarity=0.511 Sum_probs=27.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|.+.|..|++.|++|.++ ++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4699999 999999999999999999999 65
No 374
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=81.65 E-value=1.3 Score=42.88 Aligned_cols=31 Identities=19% Similarity=0.238 Sum_probs=28.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |-+|.++|..|++.|.+|.+++|.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3699999 999999999999999999999876
No 375
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=81.65 E-value=1.2 Score=42.61 Aligned_cols=33 Identities=24% Similarity=0.421 Sum_probs=29.8
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccCC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~~ 143 (535)
..|+||| |-+|..+|..|++.|. +++|+|.+.+
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 5799999 9999999999999998 6889998854
No 376
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=81.64 E-value=1.1 Score=43.99 Aligned_cols=35 Identities=26% Similarity=0.534 Sum_probs=30.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTLK 144 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~~~ 144 (535)
...|+||| |-.|..+|..|++.|. +++|+|.+.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve 72 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVE 72 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccC
Confidence 36899999 9999999999999997 68999988543
No 377
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=81.63 E-value=1.2 Score=45.19 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |.+|..+|..|...|.+|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4699999 999999999999999999999986
No 378
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=81.42 E-value=1.6 Score=43.84 Aligned_cols=35 Identities=31% Similarity=0.623 Sum_probs=30.7
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccCCC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTLK 144 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~~~ 144 (535)
...|+||| |-+|..+|..|++.|. +++|+|.+.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve 70 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 70 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEec
Confidence 35799999 9999999999999998 58899998644
No 379
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=81.37 E-value=1.5 Score=46.33 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=30.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
..+|.||| |..|..+|..|++.|++|.++++.+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35799999 9999999999999999999999873
No 380
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=81.34 E-value=1.2 Score=45.38 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=29.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |.+|+.+|..+...|.+|.++|+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~ 204 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVR 204 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4799999 999999999999999999999987
No 381
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=81.03 E-value=1.1 Score=47.40 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=31.4
Q ss_pred cccEEEEc-chHHHHHHHHHHHCC-CcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKG-LRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G-~~V~liEr~~ 142 (535)
.+|||||| |++||++|+.|+++| ++|+|+|+..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ 42 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARD 42 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 58999999 999999999999999 9999999975
No 382
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.97 E-value=1.1 Score=44.33 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=29.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCC-CcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKG-LRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G-~~V~liEr~~ 142 (535)
..|.||| |..|..+|..|++.| ++|.++++.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3699999 999999999999999 9999999873
No 383
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=80.92 E-value=1.1 Score=49.75 Aligned_cols=31 Identities=39% Similarity=0.434 Sum_probs=29.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|.||| |..|...|..|++.|++|+++|++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~ 344 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVN 344 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECC
Confidence 3699999 999999999999999999999987
No 384
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=80.85 E-value=1.4 Score=42.42 Aligned_cols=30 Identities=30% Similarity=0.398 Sum_probs=28.0
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|.||| |..|.+.|..|++.|++|.+++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 488999 999999999999999999999876
No 385
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=80.84 E-value=1.3 Score=45.00 Aligned_cols=31 Identities=32% Similarity=0.419 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |..|..+|..|+..|.+|+++|+.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 4699999 999999999999999999999976
No 386
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=80.72 E-value=1.5 Score=46.47 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=30.0
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
...|.||| |..|..+|..|+++|++|.+++|.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~ 42 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRT 42 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36799999 999999999999999999999987
No 387
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=80.61 E-value=1.5 Score=44.16 Aligned_cols=31 Identities=23% Similarity=0.179 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|.||| |..|.+.|..|.+.|++|.+++++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~ 40 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRS 40 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3599999 999999999999999999999987
No 388
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=80.55 E-value=1.4 Score=43.61 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC--cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL--RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~ 141 (535)
..|.||| |..|.+.|..|++.|+ +|.++|++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 4699999 9999999999999999 99999986
No 389
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=80.36 E-value=1.4 Score=46.40 Aligned_cols=31 Identities=35% Similarity=0.429 Sum_probs=28.8
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
--|+|+| |..|..+|..|+..|.+|++.|++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3599999 999999999999999999999876
No 390
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=80.31 E-value=1.7 Score=43.33 Aligned_cols=31 Identities=26% Similarity=0.442 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
..|.||| |..|..+|..|+..|+ +|.|+|.+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 4799999 9999999999999998 99999987
No 391
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=80.24 E-value=1 Score=44.09 Aligned_cols=30 Identities=30% Similarity=0.650 Sum_probs=28.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHC-----C-CcEEEEcc
Q 009427 111 FDVIVCG-GTLGIFIATALSFK-----G-LRVAIVER 140 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~-----G-~~V~liEr 140 (535)
..|.||| |..|.+.|..|++. | ++|.+++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999 99999999999999 9 99999986
No 392
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=80.23 E-value=1.5 Score=43.66 Aligned_cols=31 Identities=35% Similarity=0.329 Sum_probs=29.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
-.|.||| |..|.++|..|+..|+ +|.++|+.
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4699999 9999999999999999 99999986
No 393
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=80.09 E-value=1.6 Score=42.92 Aligned_cols=31 Identities=26% Similarity=0.284 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|...|..|++.|++|.+++++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4699999 999999999999999999999987
No 394
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=79.99 E-value=1.4 Score=43.40 Aligned_cols=30 Identities=30% Similarity=0.462 Sum_probs=27.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |-.|.+.|..|+ .|.+|.+++|.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 3699999 999999999999 99999999986
No 395
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=79.98 E-value=1.2 Score=46.71 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHC--CCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFK--GLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~ 141 (535)
..|.||| |..|+.+|..|++. |++|+++|++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4699999 99999999999999 8999999987
No 396
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=79.94 E-value=0.85 Score=46.05 Aligned_cols=30 Identities=33% Similarity=0.442 Sum_probs=28.6
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|.||| |..|.+.|..|++.|++|.+++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 699999 999999999999999999999886
No 397
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=79.87 E-value=1.5 Score=46.28 Aligned_cols=32 Identities=25% Similarity=0.412 Sum_probs=30.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
+.+|.||| |..|..+|..|++.|++|.+++|.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46899999 999999999999999999999987
No 398
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=79.73 E-value=0.72 Score=43.33 Aligned_cols=30 Identities=17% Similarity=0.284 Sum_probs=28.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |..|..+|..|.+.|+ |+++|++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~ 40 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDE 40 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECC
Confidence 4699999 9999999999999999 9999987
No 399
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=79.65 E-value=1.6 Score=46.05 Aligned_cols=30 Identities=40% Similarity=0.655 Sum_probs=28.6
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
+|.||| |..|..+|..|++.|++|.+++|.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 699999 999999999999999999999986
No 400
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=79.53 E-value=1.6 Score=46.05 Aligned_cols=31 Identities=19% Similarity=0.356 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.+|.||| |..|..+|..|++.|++|.+++|.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4699999 999999999999999999999986
No 401
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=79.52 E-value=1.3 Score=41.31 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=28.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEE-Eccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAI-VERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~l-iEr~ 141 (535)
..|.||| |-.|.++|..|++.|++|.+ ++|+
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 4799999 99999999999999999998 7876
No 402
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=79.50 E-value=1.4 Score=49.03 Aligned_cols=32 Identities=28% Similarity=0.271 Sum_probs=29.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-.|.||| |..|...|..|++.|++|+++|+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 3599999 9999999999999999999999873
No 403
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=79.48 E-value=1.4 Score=42.76 Aligned_cols=31 Identities=26% Similarity=0.424 Sum_probs=28.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|...|..|++.|++|.+++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3699999 999999999999999999999886
No 404
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=79.45 E-value=1.7 Score=41.97 Aligned_cols=30 Identities=27% Similarity=0.452 Sum_probs=27.8
Q ss_pred cEEEEc-chHHHHHHHHHHHCCC--cEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGL--RVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~ 141 (535)
.|.||| |..|.+.|..|++.|+ +|.+++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 489999 9999999999999998 89999876
No 405
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=79.40 E-value=1.1 Score=47.24 Aligned_cols=31 Identities=26% Similarity=0.419 Sum_probs=28.8
Q ss_pred ccEEEEc-chHHHHHHHHHHHC--CCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFK--GLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~ 141 (535)
..|.||| |..|+.+|..|++. |++|+++|++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4799999 99999999999998 7999999986
No 406
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=79.38 E-value=1.4 Score=43.63 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
..|.||| |..|...|..|++.|+ +|.++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4799999 9999999999999999 99999986
No 407
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=79.27 E-value=1.4 Score=41.88 Aligned_cols=30 Identities=30% Similarity=0.510 Sum_probs=27.9
Q ss_pred cEEEEc-chHHHHHHHHHHHCC-CcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKG-LRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G-~~V~liEr~ 141 (535)
.|.||| |..|...|..|++.| ++|.+++|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 488999 999999999999999 999999886
No 408
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=79.17 E-value=1.6 Score=44.54 Aligned_cols=31 Identities=35% Similarity=0.435 Sum_probs=28.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |..|..+|..+...|.+|+++|+.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4699999 999999999999999999999976
No 409
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=79.15 E-value=1.6 Score=42.35 Aligned_cols=30 Identities=27% Similarity=0.285 Sum_probs=28.2
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|.||| |..|...|..|++.|++|.+++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 488999 999999999999999999999986
No 410
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=78.91 E-value=1.9 Score=45.40 Aligned_cols=48 Identities=13% Similarity=-0.006 Sum_probs=37.8
Q ss_pred HHHHhCCCEEEeCceEEEEEEeCCeEEEEEcCCeEEEcCeEEEccCCC
Q 009427 213 KRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (535)
Q Consensus 213 ~~a~~~G~~i~~~~~V~~i~~~~~gv~v~~~~G~~i~a~lVV~AdG~~ 260 (535)
+.+++.|++++.+++|+++..+++...+.+++|+++.+|.||.|.|..
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEE
T ss_pred HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcC
Confidence 556677999999999999964433334566778899999999999954
No 411
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=78.71 E-value=0.68 Score=43.94 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=29.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
...|.||| |..|.++|..|+++|++|.++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 35799999 999999999999999999999873
No 412
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=78.64 E-value=1.2 Score=43.76 Aligned_cols=31 Identities=29% Similarity=0.437 Sum_probs=26.2
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.|-+|| |..|...|..|++.|++|.+++|.+
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 499999 9999999999999999999999873
No 413
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=78.48 E-value=2.4 Score=43.21 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=31.3
Q ss_pred cccEEEEc-chHHHHHHHHHHHCC-CcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKG-LRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G-~~V~liEr~~ 142 (535)
++||+||| |++|+++|+.|+++| ++|+|+|+..
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 58999999 999999999999999 9999999974
No 414
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=78.41 E-value=2 Score=42.85 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=29.6
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
...|.||| |..|.++|..|+..|+ +|.|+|.+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~ 40 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIA 40 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 35799999 9999999999999999 99999987
No 415
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=78.38 E-value=1.8 Score=42.70 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=27.7
Q ss_pred cEEEEc-chHHHHHHHHHHHC--CCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFK--GLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~--G~~V~liEr~ 141 (535)
.|.||| |..|..+|..|++. |.+|.++|++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 489999 99999999999995 7899999987
No 416
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=78.34 E-value=1.8 Score=46.55 Aligned_cols=32 Identities=22% Similarity=0.357 Sum_probs=30.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-.++||| |..|..+|..|.+.|++|++||+++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~ 381 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQE 381 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCh
Confidence 5799999 9999999999999999999999985
No 417
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=78.08 E-value=1.7 Score=42.20 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |..|...|..|++.|++|.+++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4699999 999999999999999999999986
No 418
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=77.94 E-value=1.8 Score=42.58 Aligned_cols=31 Identities=23% Similarity=0.223 Sum_probs=28.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
-.|+|+| |.+|.++|..|++.|. +|.|+.|.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4699999 9999999999999998 89999876
No 419
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=77.85 E-value=1.6 Score=44.04 Aligned_cols=33 Identities=18% Similarity=0.579 Sum_probs=29.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccCC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~~ 143 (535)
..|+||| |-+|..+|..|++.|. +++|+|.+.+
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 5799999 9999999999999998 6899998854
No 420
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=77.57 E-value=2.1 Score=39.08 Aligned_cols=30 Identities=27% Similarity=0.376 Sum_probs=28.1
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|+|.| |..|..++..|+++|++|.++.|+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 389999 999999999999999999999987
No 421
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=77.30 E-value=1.7 Score=43.10 Aligned_cols=30 Identities=27% Similarity=0.525 Sum_probs=28.1
Q ss_pred cEEEEc-chHHHHHHHHHHHCCC--cEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGL--RVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~ 141 (535)
.|.||| |-.|.++|..|++.|+ +|.++|++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 489999 9999999999999999 99999986
No 422
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=77.29 E-value=2.2 Score=41.39 Aligned_cols=31 Identities=26% Similarity=0.487 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.++|+| |-+|.++|..|++.|.+|.|+.|.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4799999 999999999999999999999887
No 423
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=77.12 E-value=2.1 Score=44.37 Aligned_cols=31 Identities=35% Similarity=0.493 Sum_probs=29.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |..|..+|..|...|.+|++.|++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4699999 999999999999999999999986
No 424
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=76.95 E-value=1.7 Score=41.89 Aligned_cols=29 Identities=24% Similarity=0.360 Sum_probs=27.2
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|.||| |..|...|..|++ |++|.+++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCC
Confidence 489999 9999999999999 9999999986
No 425
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=76.79 E-value=2.3 Score=39.48 Aligned_cols=29 Identities=21% Similarity=0.385 Sum_probs=27.0
Q ss_pred EEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 113 VIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 113 VvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
|+|.| |-.|..+|..|+++|.+|++++|+
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 78999 888999999999999999999876
No 426
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=76.77 E-value=2.2 Score=44.93 Aligned_cols=31 Identities=29% Similarity=0.398 Sum_probs=29.3
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.+|.||| |..|...|..|++.|++|.+++|.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 5799999 999999999999999999999986
No 427
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=76.72 E-value=3.3 Score=43.32 Aligned_cols=33 Identities=27% Similarity=0.435 Sum_probs=31.3
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.+||+||| |++|+++|+.|+++|++|+|+|+..
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 57999999 9999999999999999999999974
No 428
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=76.55 E-value=1.9 Score=44.05 Aligned_cols=32 Identities=28% Similarity=0.548 Sum_probs=30.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
+..|||+| |.+|+.+|..|...|. +|.++|+.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 57899999 9999999999999999 89999998
No 429
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=76.53 E-value=2.3 Score=38.98 Aligned_cols=29 Identities=31% Similarity=0.417 Sum_probs=27.7
Q ss_pred EEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 113 VIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 113 VvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
|+|.| |..|..++..|+++|++|.++.|.
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 89999 999999999999999999999886
No 430
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=76.51 E-value=2.1 Score=45.26 Aligned_cols=31 Identities=35% Similarity=0.605 Sum_probs=28.9
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+||| |..|..+|..|...|.+|+++|+.
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3699999 999999999999999999999986
No 431
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=76.46 E-value=2.2 Score=41.70 Aligned_cols=31 Identities=29% Similarity=0.491 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|.||| |..|..+|..|...|.+|.++++.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 4699999 999999999999999999999986
No 432
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=76.46 E-value=1.6 Score=42.24 Aligned_cols=31 Identities=16% Similarity=0.193 Sum_probs=28.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |-+|.++|..|++.|.+|.|+.|.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4699999 999999999999999999999876
No 433
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=76.41 E-value=2.3 Score=39.55 Aligned_cols=31 Identities=29% Similarity=0.509 Sum_probs=28.9
Q ss_pred ccEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|.| |-.|..+|..|+++|++|.++.|+
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 3599999 999999999999999999999987
No 434
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=76.37 E-value=2.4 Score=42.70 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=30.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccCCC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTLK 144 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~~~ 144 (535)
..|+||| |..|..+|..|++.|. +++|+|.+.+.
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~ 72 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVT 72 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcc
Confidence 5799999 9999999999999998 69999988544
No 435
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=76.01 E-value=2.4 Score=41.90 Aligned_cols=30 Identities=23% Similarity=0.356 Sum_probs=28.1
Q ss_pred cEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
.|.||| |-.|..+|..|+..|+ +|.++|.+
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 699999 9999999999999997 99999986
No 436
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=75.91 E-value=2.6 Score=45.53 Aligned_cols=34 Identities=32% Similarity=0.637 Sum_probs=30.6
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccCCC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTLK 144 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~~~ 144 (535)
..|+||| |-.|+.+|..|++.|. +++|+|.+.+.
T Consensus 327 arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 327 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 5799999 9999999999999998 68999998654
No 437
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=75.89 E-value=2.4 Score=40.13 Aligned_cols=31 Identities=19% Similarity=0.360 Sum_probs=28.4
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-|+|.| |-.|..+|..|+++|.+|++++|..
T Consensus 24 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 24 NILVLGGSGALGAEVVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 489999 8899999999999999999999874
No 438
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=75.80 E-value=2.3 Score=41.63 Aligned_cols=31 Identities=32% Similarity=0.440 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|.||| |..|..+|..|...|.+|+++++.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 4699999 999999999999999999999986
No 439
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=75.49 E-value=2.4 Score=42.56 Aligned_cols=31 Identities=23% Similarity=0.367 Sum_probs=28.7
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.|+|+| |..|..+|+.+.+.|++|+++|.++
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 489999 9999999999999999999999874
No 440
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=75.44 E-value=2 Score=42.24 Aligned_cols=30 Identities=23% Similarity=0.429 Sum_probs=27.9
Q ss_pred cEEEEc-chHHHHHHHHHHHCC--CcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKG--LRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G--~~V~liEr~ 141 (535)
.|.||| |-.|.++|..|++.| .+|.++|++
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 589999 999999999999999 689999986
No 441
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=75.34 E-value=2.5 Score=39.86 Aligned_cols=30 Identities=37% Similarity=0.493 Sum_probs=27.7
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-|+|.| |-.|..+|..|+++|++|++++|+
T Consensus 15 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 15 VAIVTGGAQNIGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 899999999999999999999876
No 442
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=75.34 E-value=2.2 Score=40.66 Aligned_cols=31 Identities=35% Similarity=0.562 Sum_probs=28.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCc-EEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLR-VAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~-V~liEr~ 141 (535)
..|.||| |-.|...|..|++.|++ |.+++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 4699999 99999999999999999 8999876
No 443
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=75.29 E-value=2.5 Score=39.46 Aligned_cols=30 Identities=20% Similarity=0.370 Sum_probs=28.0
Q ss_pred EEEEc--chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 113 VIVCG--GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 113 VvIVG--G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
|+|.| |-.|..+|..|+++|++|.++.|..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 88999 9999999999999999999999874
No 444
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=75.26 E-value=2.1 Score=41.34 Aligned_cols=31 Identities=26% Similarity=0.333 Sum_probs=28.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+||| |.+|.++|..|++.|.+|.+++|.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 4699999 999999999999999999999886
No 445
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=75.25 E-value=4.5 Score=38.84 Aligned_cols=30 Identities=23% Similarity=0.369 Sum_probs=27.3
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|.+|++++|+
T Consensus 29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 488999 788999999999999999999876
No 446
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=75.18 E-value=2.6 Score=42.14 Aligned_cols=30 Identities=30% Similarity=0.380 Sum_probs=28.3
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|.||| |..|.+.|..|++.|++|.+.++.
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~ 48 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRS 48 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCT
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECC
Confidence 599999 999999999999999999999886
No 447
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=75.12 E-value=2.7 Score=39.68 Aligned_cols=30 Identities=17% Similarity=0.370 Sum_probs=28.3
Q ss_pred cEEEEc-chHHHHHHHHHHHCCC----cEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGL----RVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~----~V~liEr~ 141 (535)
.|.||| |..|.+.|..|++.|+ +|.+++|+
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred eEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 589999 9999999999999998 99999986
No 448
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=74.98 E-value=2.5 Score=42.78 Aligned_cols=31 Identities=23% Similarity=0.435 Sum_probs=28.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+|+| |-.|..+|..|.+.|.+|++.|++
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4699999 999999999999999999999864
No 449
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=74.78 E-value=2.2 Score=40.65 Aligned_cols=29 Identities=24% Similarity=0.312 Sum_probs=26.5
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVER 140 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr 140 (535)
.|.||| |-.|...|..|++.|++|.+.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 378999 99999999999999999999765
No 450
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=74.77 E-value=1.8 Score=43.91 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=28.9
Q ss_pred cEEEEc-chHHHHHHHHHHHCC-------CcEEEEcccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKG-------LRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G-------~~V~liEr~~ 142 (535)
.|.||| |..|.+.|..|++.| ++|.+++|..
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence 599999 999999999999999 9999999873
No 451
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=74.77 E-value=2.7 Score=39.38 Aligned_cols=30 Identities=30% Similarity=0.515 Sum_probs=27.4
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|.+|++++|+
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 488999 888999999999999999999886
No 452
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=74.76 E-value=2.8 Score=45.21 Aligned_cols=34 Identities=32% Similarity=0.637 Sum_probs=30.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccCCC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTLK 144 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~~~ 144 (535)
..|+||| |-+|..+|..|++.|. +++|+|.+.+.
T Consensus 328 ~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve 363 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 363 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccc
Confidence 5799999 9999999999999998 68999988543
No 453
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=74.66 E-value=2.9 Score=40.01 Aligned_cols=30 Identities=37% Similarity=0.440 Sum_probs=28.4
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.++||| |-+|.++|..|.+.|.+|.+++|.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 799999 999999999999999999999886
No 454
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=74.66 E-value=2.8 Score=37.59 Aligned_cols=31 Identities=19% Similarity=0.431 Sum_probs=28.7
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.|+|.| |..|..++..|.++|++|.++.|+.
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 489999 9999999999999999999999874
No 455
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=74.58 E-value=2.3 Score=43.37 Aligned_cols=32 Identities=34% Similarity=0.461 Sum_probs=29.9
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
+..|+|+| |.+|..+|..|...|. +|.++|+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 57899999 9999999999999998 79999997
No 456
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=74.48 E-value=2.2 Score=47.49 Aligned_cols=31 Identities=39% Similarity=0.453 Sum_probs=29.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|.||| |..|...|..++..|++|+|+|..
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~ 348 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESD 348 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccch
Confidence 4799999 999999999999999999999987
No 457
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=74.45 E-value=2.6 Score=43.60 Aligned_cols=31 Identities=39% Similarity=0.485 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.|+||| |..|..+|..|...|.+|+++|++
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~ 243 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVD 243 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4699999 999999999999999999999986
No 458
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=74.38 E-value=2.7 Score=39.40 Aligned_cols=30 Identities=27% Similarity=0.513 Sum_probs=27.6
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|++|++++|+
T Consensus 13 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 13 CAAVTGAGSGIGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 488999 899999999999999999999876
No 459
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=74.19 E-value=2.8 Score=39.47 Aligned_cols=30 Identities=37% Similarity=0.453 Sum_probs=27.5
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-|+|.| |-.|..+|..|+++|.+|++++|+
T Consensus 11 ~vlITGas~giG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 11 VGIVTGSGGGIGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 488999 888999999999999999999876
No 460
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=74.18 E-value=2.8 Score=39.03 Aligned_cols=30 Identities=30% Similarity=0.393 Sum_probs=27.8
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-|+|.| |-.|..+|..|+++|++|++++|+
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 9 RALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 999999999999999999999876
No 461
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=74.09 E-value=2.8 Score=39.20 Aligned_cols=29 Identities=38% Similarity=0.473 Sum_probs=27.0
Q ss_pred EEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 113 VIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 113 VvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
++|.| |-.|..+|..|+++|++|++++|+
T Consensus 5 vlItGasggiG~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 5 AIVTGASSGNGLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 78999 899999999999999999999876
No 462
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=74.05 E-value=2.8 Score=39.56 Aligned_cols=30 Identities=37% Similarity=0.490 Sum_probs=27.7
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|++|++++|+
T Consensus 21 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~ 52 (249)
T 1o5i_A 21 GVLVLAASRGIGRAVADVLSQEGAEVTICARN 52 (249)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 489999 889999999999999999999876
No 463
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=74.02 E-value=2.5 Score=41.53 Aligned_cols=30 Identities=23% Similarity=0.363 Sum_probs=28.5
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
.|-+|| |..|...|..|.+.|++|.+.+|.
T Consensus 5 kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~ 35 (300)
T 3obb_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (300)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEeeehHHHHHHHHHHHhCCCeEEEEcCC
Confidence 588999 999999999999999999999986
No 464
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=73.98 E-value=2.8 Score=39.67 Aligned_cols=30 Identities=33% Similarity=0.410 Sum_probs=27.5
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|.+|++++|+
T Consensus 9 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 9 TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 488999 788999999999999999999986
No 465
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=73.91 E-value=1.6 Score=43.64 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=29.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCC-------CcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKG-------LRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G-------~~V~liEr~~ 142 (535)
..|.||| |..|.+.|..|++.| ++|.+++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 4699999 999999999999999 8999999873
No 466
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=73.77 E-value=3.1 Score=41.24 Aligned_cols=31 Identities=16% Similarity=0.326 Sum_probs=29.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC--cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL--RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~ 141 (535)
..|.||| |-.|.++|+.|+..|+ +|.++|.+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 5799999 9999999999999998 89999987
No 467
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=73.71 E-value=2.6 Score=39.43 Aligned_cols=31 Identities=29% Similarity=0.382 Sum_probs=28.3
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-++|.| |-.|..+|..|+++|++|++++|+.
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (241)
T 1dhr_A 9 RVLVYGGRGALGSRCVQAFRARNWWVASIDVVE 41 (241)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 489999 8899999999999999999999874
No 468
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=73.70 E-value=2.5 Score=39.42 Aligned_cols=31 Identities=32% Similarity=0.453 Sum_probs=28.3
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-++|.| |-.|..+|..|+++|++|++++|+.
T Consensus 5 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~ 37 (236)
T 1ooe_A 5 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA 37 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEecCc
Confidence 488999 8899999999999999999999874
No 469
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=73.67 E-value=2.9 Score=39.36 Aligned_cols=29 Identities=28% Similarity=0.385 Sum_probs=26.8
Q ss_pred EEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 113 VIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 113 VvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
++|.| |-.|..+|..|+++|.+|++++|+
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 5 VIVTGGGHGIGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 78999 888999999999999999999876
No 470
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=73.67 E-value=2.9 Score=39.50 Aligned_cols=30 Identities=27% Similarity=0.348 Sum_probs=27.3
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|.+|++++|+
T Consensus 14 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 14 IILVTGASDGIGREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 488889 888999999999999999999876
No 471
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=73.62 E-value=1.7 Score=44.55 Aligned_cols=28 Identities=25% Similarity=0.462 Sum_probs=26.4
Q ss_pred cEEEEc-chHHHHHHHHHHH-CCCcEEEEc
Q 009427 112 DVIVCG-GTLGIFIATALSF-KGLRVAIVE 139 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr-~G~~V~liE 139 (535)
.|.||| |..|.+.|..|++ .|++|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 589999 9999999999998 499999999
No 472
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=73.57 E-value=2.5 Score=41.52 Aligned_cols=30 Identities=20% Similarity=0.193 Sum_probs=27.9
Q ss_pred cEEEEc-chHHHHHHHHHHHCCC--cEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGL--RVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~ 141 (535)
.|.||| |..|.++|..|+..|+ +|.|+|++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~ 34 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 489999 9999999999999998 89999986
No 473
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=73.53 E-value=2.4 Score=41.23 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=29.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~~ 142 (535)
-.++|+| |-+|.++|..|++.|. +|.|+.|..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4699999 9999999999999999 899998873
No 474
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=73.53 E-value=2.9 Score=39.29 Aligned_cols=30 Identities=13% Similarity=0.326 Sum_probs=27.7
Q ss_pred EEEEc--chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 113 VIVCG--GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 113 VvIVG--G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
++|.| |-.|..+|..|+++|++|+++.|+.
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 35 (257)
T 1fjh_A 4 IVISGCATGIGAATRKVLEAAGHQIVGIDIRD 35 (257)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 78999 8899999999999999999999874
No 475
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=73.47 E-value=2.5 Score=39.20 Aligned_cols=30 Identities=33% Similarity=0.545 Sum_probs=27.5
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-|+|.| |-.|..+|..|+++|++|+++.|+
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 388999 899999999999999999999876
No 476
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=73.42 E-value=3 Score=39.49 Aligned_cols=30 Identities=27% Similarity=0.455 Sum_probs=27.5
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|.+|++++|+
T Consensus 11 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~ 42 (261)
T 3n74_A 11 VALITGAGSGFGEGMAKRFAKGGAKVVIVDRD 42 (261)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 488999 788999999999999999999876
No 477
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=73.41 E-value=2.5 Score=39.24 Aligned_cols=31 Identities=32% Similarity=0.491 Sum_probs=28.1
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-++|.| |-.|..+|..|+++|++|++++|..
T Consensus 4 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~ 36 (242)
T 1uay_A 4 SALVTGGASGLGRAAALALKARGYRVVVLDLRR 36 (242)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEccCc
Confidence 388999 8999999999999999999998873
No 478
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=73.39 E-value=3 Score=39.40 Aligned_cols=30 Identities=23% Similarity=0.335 Sum_probs=27.7
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-|+|.| |-.|..+|..|+++|++|++++|+
T Consensus 9 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 9 LALVTGAGSGIGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 899999999999999999999876
No 479
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=73.39 E-value=3.1 Score=40.58 Aligned_cols=31 Identities=26% Similarity=0.457 Sum_probs=28.2
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
-.|+|+| |-+|.++|..|++.|. +|.|+.|.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 4699999 9999999999999999 69999876
No 480
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=73.35 E-value=3 Score=38.85 Aligned_cols=30 Identities=37% Similarity=0.447 Sum_probs=27.6
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-|+|.| |-.|..+|..|+++|++|.++.|+
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 899999999999999999999875
No 481
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=73.23 E-value=3.2 Score=38.11 Aligned_cols=29 Identities=14% Similarity=0.509 Sum_probs=27.5
Q ss_pred EEEEc--chHHHHHHHHHH-HCCCcEEEEccc
Q 009427 113 VIVCG--GTLGIFIATALS-FKGLRVAIVERN 141 (535)
Q Consensus 113 VvIVG--G~aGl~~A~~LA-r~G~~V~liEr~ 141 (535)
|+|.| |-.|..+|..|+ +.|++|.++.|+
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 99999 999999999999 899999999887
No 482
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=73.20 E-value=2.9 Score=41.42 Aligned_cols=31 Identities=23% Similarity=0.548 Sum_probs=28.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
-.++|+| |-+|.++|..|++.|. +|.|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 4699999 9999999999999998 79999886
No 483
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=73.16 E-value=3.2 Score=39.73 Aligned_cols=30 Identities=30% Similarity=0.410 Sum_probs=28.5
Q ss_pred cEEEEc-chHHHHHHHHHHHCCC-cEEEEccc
Q 009427 112 DVIVCG-GTLGIFIATALSFKGL-RVAIVERN 141 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~-~V~liEr~ 141 (535)
.++|+| |-+|.+++..|++.|. +|.|++|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 799999 9999999999999998 89999987
No 484
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=73.11 E-value=3 Score=40.03 Aligned_cols=30 Identities=37% Similarity=0.489 Sum_probs=27.4
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|.+|++++|+
T Consensus 32 ~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 32 SAIVSGGAGGLGEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 488999 888999999999999999999876
No 485
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=73.10 E-value=2.5 Score=40.16 Aligned_cols=32 Identities=13% Similarity=0.181 Sum_probs=29.1
Q ss_pred ccEEEEc-chHHHHHHHHHHHCC----CcEEEEcccC
Q 009427 111 FDVIVCG-GTLGIFIATALSFKG----LRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G----~~V~liEr~~ 142 (535)
..|.||| |..|.+.|..|++.| ++|.+++|.+
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 4699999 999999999999999 7999999874
No 486
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=73.05 E-value=4.6 Score=44.21 Aligned_cols=33 Identities=33% Similarity=0.463 Sum_probs=31.3
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.+||+||| |++|+++|+.|++.|++|+|+|+..
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~ 140 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 140 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 58999999 9999999999999999999999874
No 487
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=72.96 E-value=2.5 Score=40.07 Aligned_cols=31 Identities=16% Similarity=0.232 Sum_probs=28.7
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
..|.||| |-.|...|..|++.|.+|.+++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 4699999 999999999999999999999886
No 488
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=72.88 E-value=2.6 Score=39.44 Aligned_cols=30 Identities=27% Similarity=0.419 Sum_probs=27.5
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|.+|++++|+
T Consensus 16 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 16 VILVTGAARGIGAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 488999 888999999999999999999876
No 489
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=72.86 E-value=2.5 Score=38.81 Aligned_cols=31 Identities=19% Similarity=0.378 Sum_probs=28.7
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.|+|.| |..|..++..|+++|++|.++.|..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 389999 9999999999999999999999874
No 490
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=72.86 E-value=3.2 Score=38.82 Aligned_cols=30 Identities=47% Similarity=0.639 Sum_probs=27.6
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|++|.+++|+
T Consensus 4 ~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRN 35 (239)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 388999 899999999999999999999886
No 491
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=72.86 E-value=4.4 Score=40.42 Aligned_cols=32 Identities=28% Similarity=0.375 Sum_probs=29.1
Q ss_pred cccEEEEc-chHHHHHHHHHHHCCC--cEEEEccc
Q 009427 110 TFDVIVCG-GTLGIFIATALSFKGL--RVAIVERN 141 (535)
Q Consensus 110 ~~DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~ 141 (535)
...|.||| |..|.++|+.|+..|+ +|.++|.+
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 35799999 9999999999999998 89999975
No 492
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=72.79 E-value=3.1 Score=39.44 Aligned_cols=30 Identities=27% Similarity=0.396 Sum_probs=27.5
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|.+|++++|+
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 41 (259)
T 4e6p_A 10 SALITGSARGIGRAFAEAYVREGATVAIADID 41 (259)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 488999 888999999999999999999875
No 493
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=72.76 E-value=3.2 Score=38.51 Aligned_cols=30 Identities=30% Similarity=0.424 Sum_probs=27.2
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|.+|+++.|+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARS 35 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 378899 888999999999999999999876
No 494
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=72.75 E-value=2.6 Score=40.07 Aligned_cols=30 Identities=33% Similarity=0.474 Sum_probs=27.5
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-|+|.| |-.|..+|..|+++|.+|++++|+
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 488999 888999999999999999999876
No 495
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=72.72 E-value=2.8 Score=38.52 Aligned_cols=32 Identities=22% Similarity=0.392 Sum_probs=29.5
Q ss_pred ccEEEEc--chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 111 FDVIVCG--GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 111 ~DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
-.|+|.| |..|..++..|.++|++|.++.|..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 3599999 9999999999999999999999974
No 496
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=72.70 E-value=2.3 Score=41.44 Aligned_cols=30 Identities=20% Similarity=0.370 Sum_probs=27.4
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCCcEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-.++|+| |-+|.++|..|++.| +|++++|.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 3599999 999999999999999 99999876
No 497
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=72.68 E-value=3.1 Score=39.44 Aligned_cols=30 Identities=40% Similarity=0.505 Sum_probs=27.6
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|++|++++|+
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 45 (263)
T 3ak4_A 14 KAIVTGGSKGIGAAIARALDKAGATVAIADLD 45 (263)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 889999999999999999999876
No 498
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=72.67 E-value=3.3 Score=39.63 Aligned_cols=30 Identities=27% Similarity=0.407 Sum_probs=27.2
Q ss_pred cEEEEc--chHHHHHHHHHHHCCCcEEEEccc
Q 009427 112 DVIVCG--GTLGIFIATALSFKGLRVAIVERN 141 (535)
Q Consensus 112 DVvIVG--G~aGl~~A~~LAr~G~~V~liEr~ 141 (535)
-++|.| |-.|..+|..|+++|.+|++++|+
T Consensus 18 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 18 LVVITGASSGIGEAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 488889 888999999999999999999876
No 499
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=72.65 E-value=3.1 Score=41.48 Aligned_cols=31 Identities=29% Similarity=0.436 Sum_probs=28.5
Q ss_pred ccEEEEc-chHHHHHHHHHHHCCC--cEEEEccc
Q 009427 111 FDVIVCG-GTLGIFIATALSFKGL--RVAIVERN 141 (535)
Q Consensus 111 ~DVvIVG-G~aGl~~A~~LAr~G~--~V~liEr~ 141 (535)
..|.||| |..|.++|..|+..|+ +|.++|.+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 4699999 9999999999999998 89999975
No 500
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=72.55 E-value=3.3 Score=39.69 Aligned_cols=31 Identities=29% Similarity=0.590 Sum_probs=29.1
Q ss_pred cEEEEc-chHHHHHHHHHHHCCCcEEEEcccC
Q 009427 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (535)
Q Consensus 112 DVvIVG-G~aGl~~A~~LAr~G~~V~liEr~~ 142 (535)
.|+|.| |..|..++..|.++|++|.++.|..
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 599999 9999999999999999999999874
Done!