BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009432
(535 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CB49|YLPM1_RAT YLP motif-containing protein 1 OS=Rattus norvegicus GN=Ylpm1 PE=1
SV=1
Length = 1376
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/249 (45%), Positives = 152/249 (61%), Gaps = 19/249 (7%)
Query: 142 LPMQYPGESHLFPLRQLSPDKPKVVNALHLLKQPHRATRPDHFAIILRGLPGSGKSYIAK 201
+P+ P H P KP+ N +LK P R +RP+ +I+RGLPGSGK+++AK
Sbjct: 1023 MPLPAPSLGHQPPPVPRVEKKPESKNVDDILKPPGRESRPERIVVIMRGLPGSGKTHVAK 1082
Query: 202 MLRDLEVENGGDAPRIHSMDDYFMTEVEKVE-DSDVSKSSGSLRSKKPVTKMVMEYCYEP 260
++RD EVE GG APR+ S+DDYF+ EVEK E D D S K V K VMEY YE
Sbjct: 1083 LIRDKEVEFGGPAPRVLSLDDYFIAEVEKEEKDPD---------SGKKVKKKVMEYEYEA 1133
Query: 261 EMEEAYRSSMLKAFTRTLDEGNFTIVIVDDRNLRVADFAQFWATAKRSGYEVYILEATYK 320
+MEE YR+SM K F +TLD+G F +I+D N RV F QFW+ AK G+EVY+ E +
Sbjct: 1134 DMEETYRTSMFKTFKKTLDDGFFPFIILDAINDRVRHFDQFWSAAKTKGFEVYLAEMS-A 1192
Query: 321 DPAGCAARNVHGFTLDDIERMAGQWEEAPTLYLQLDIKTLFHGDDLKESGIKEVEMDMDE 380
D C RN+HG L +I +MA WE AP ++LDI++L L+++ I+EVEM E
Sbjct: 1193 DNQTCGKRNIHGRKLKEINKMAEHWEAAPRHMMRLDIRSL-----LQDAAIEEVEM---E 1244
Query: 381 DSDGLLAQQ 389
D D + Q
Sbjct: 1245 DFDANIEDQ 1253
>sp|Q9R0I7|YLPM1_MOUSE YLP motif-containing protein 1 OS=Mus musculus GN=Ylpm1 PE=2 SV=2
Length = 1386
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/249 (45%), Positives = 152/249 (61%), Gaps = 19/249 (7%)
Query: 142 LPMQYPGESHLFPLRQLSPDKPKVVNALHLLKQPHRATRPDHFAIILRGLPGSGKSYIAK 201
+P+ P H P KP+ N +LK P R +RP+ +I+RGLPGSGK+++AK
Sbjct: 1033 MPLPAPALGHQPPPVPRVEKKPESKNVDDILKPPGRESRPERIVVIMRGLPGSGKTHVAK 1092
Query: 202 MLRDLEVENGGDAPRIHSMDDYFMTEVEKVE-DSDVSKSSGSLRSKKPVTKMVMEYCYEP 260
++RD EVE GG APR+ S+DDYF+ EVEK E D D S K V K VMEY YE
Sbjct: 1093 LIRDKEVEFGGPAPRVLSLDDYFIAEVEKEEKDPD---------SGKKVKKKVMEYEYEA 1143
Query: 261 EMEEAYRSSMLKAFTRTLDEGNFTIVIVDDRNLRVADFAQFWATAKRSGYEVYILEATYK 320
+MEE YR+SM K F +TLD+G F +I+D N RV F QFW+ AK G+EVY+ E +
Sbjct: 1144 DMEETYRTSMFKTFKKTLDDGFFPFIILDAINDRVRHFDQFWSAAKTKGFEVYLAEMS-A 1202
Query: 321 DPAGCAARNVHGFTLDDIERMAGQWEEAPTLYLQLDIKTLFHGDDLKESGIKEVEMDMDE 380
D C RN+HG L +I +MA WE AP ++LDI++L L+++ I+EVEM E
Sbjct: 1203 DNQTCGKRNIHGRKLKEINKMAEHWEVAPRHMMRLDIRSL-----LQDAAIEEVEM---E 1254
Query: 381 DSDGLLAQQ 389
D D + Q
Sbjct: 1255 DFDANIEDQ 1263
>sp|P49750|YLPM1_HUMAN YLP motif-containing protein 1 OS=Homo sapiens GN=YLPM1 PE=1 SV=3
Length = 1951
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 150/237 (63%), Gaps = 16/237 (6%)
Query: 142 LPMQYPGESHLFPLRQLSPDKPKVVNALHLLKQPHRATRPDHFAIILRGLPGSGKSYIAK 201
+P+ P SH P KP+ N +LK P R +RP+ +I+RGLPGSGK+++AK
Sbjct: 1598 MPLPAPSLSHQPPPAPRVEKKPESKNVDDILKPPGRESRPERIVVIMRGLPGSGKTHVAK 1657
Query: 202 MLRDLEVENGGDAPRIHSMDDYFMTEVEKVE-DSDVSKSSGSLRSKKPVTKMVMEYCYEP 260
++RD EVE GG APR+ S+DDYF+TEVEK E D D S K V K VMEY YE
Sbjct: 1658 LIRDKEVEFGGPAPRVLSLDDYFITEVEKEEKDPD---------SGKKVKKKVMEYEYEA 1708
Query: 261 EMEEAYRSSMLKAFTRTLDEGNFTIVIVDDRNLRVADFAQFWATAKRSGYEVYILEATYK 320
EMEE YR+SM K F +TLD+G F +I+D N RV F QFW+ AK G+EVY+ E +
Sbjct: 1709 EMEETYRTSMFKTFKKTLDDGFFPFIILDAINDRVRHFDQFWSAAKTKGFEVYLAEMS-A 1767
Query: 321 DPAGCAARNVHGFTLDDIERMAGQWEEAPTLYLQLDIKTLFHGDDLKESGIKEVEMD 377
D C RN+HG L +I +MA WE AP ++LDI++L L+++ I+EVEM+
Sbjct: 1768 DNQTCGKRNIHGRKLKEINKMADHWETAPRHMMRLDIRSL-----LQDAAIEEVEME 1819
>sp|Q5TBK1|N42L1_HUMAN NEDD4-binding protein 2-like 1 OS=Homo sapiens GN=N4BP2L1 PE=2 SV=1
Length = 243
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 40/172 (23%)
Query: 187 ILRGLPGSGKSYIAKMLRDLEVENGGDAPR--IHSMDDYFMTEVEKVEDSDVSKSSGSLR 244
+LRGLPGSGK+ +A+ L+ D PR I S DD+F E G+
Sbjct: 46 LLRGLPGSGKTTLARQLQH-------DFPRALIFSTDDFFFRE------------DGA-- 84
Query: 245 SKKPVTKMVMEYCYEPE-MEEAYRSSMLKAFTRTLDEGNFTIVIVDDRNLRVADFAQFWA 303
Y + P+ +EEA+ + +A R + +I+D+ NL + +
Sbjct: 85 -----------YEFNPDFLEEAHEWNQKRA--RKAMRNGISPIIIDNTNLHAWEMKPYAV 131
Query: 304 TAKRSGYEVYILEATYK---DPAGCAARNVHGFTLDDIERMAGQWEEAPTLY 352
A + YEV E + + A RN+HG + + I RM ++E T +
Sbjct: 132 MALENNYEVIFREPDTRWKFNVQELARRNIHGVSREKIHRMKERYEHDVTFH 183
>sp|Q3V2Q8|N42L1_MOUSE NEDD4-binding protein 2-like 1 OS=Mus musculus GN=N4bp2l1 PE=2 SV=1
Length = 238
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 40/172 (23%)
Query: 187 ILRGLPGSGKSYIAKMLRDLEVENGGDAPR--IHSMDDYFMTEVEKVEDSDVSKSSGSLR 244
+LRGLPGSGK+ +A+ L+ D PR I S DD+F K G+
Sbjct: 44 LLRGLPGSGKTTLARQLQH-------DYPRALIFSTDDFFF------------KEDGT-- 82
Query: 245 SKKPVTKMVMEYCYEPE-MEEAYRSSMLKAFTRTLDEGNFTIVIVDDRNLRVADFAQFWA 303
Y + P +EEA+ + +A R + +I+D+ NL + +
Sbjct: 83 -----------YEFNPNLLEEAHEWNQRRA--RKAMRNGISPIIIDNTNLHAWEMKPYAV 129
Query: 304 TAKRSGYEVYILEATYK---DPAGCAARNVHGFTLDDIERMAGQWEEAPTLY 352
A + YEV E + + A RN+HG + I+RM ++E T +
Sbjct: 130 MALENNYEVIFREPDTRWKFNVQELARRNIHGVPKEKIQRMKERYEHNVTFH 181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 228,556,263
Number of Sequences: 539616
Number of extensions: 11395343
Number of successful extensions: 82645
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 1468
Number of HSP's that attempted gapping in prelim test: 51131
Number of HSP's gapped (non-prelim): 13623
length of query: 535
length of database: 191,569,459
effective HSP length: 122
effective length of query: 413
effective length of database: 125,736,307
effective search space: 51929094791
effective search space used: 51929094791
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)