Your job contains 1 sequence.
>009433
MSIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTAND
VDSALNLRNVEPIYGFASGDSLRFKRASGLKDLYYIDDKDVELRNVIETPLPKAPLDTSV
AVHWLAIEGVQPAIPENAPVDAVSDGRRSEYREDGISVDIRLPVKHVLSKELQLYFDKIR
ELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVVTRSLKNFSLLFALMRVARS
LLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFSDNHWDLRNFVADLIASICTRFGHVYQ
NLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLILPNLELYLKFLEPEMLL
EKQKNEMKRHEAWRVYGALQCAAGLCVYDRLKTVLLRPPKQSRWESNRKGMIVFPSKRKA
SMDNLMLQPPVKKMATLGPMGVMPVNSMAVNMQGPSGGFSTPVEGPRAGVSMLRHLQNEK
MLRREVSNQALKTSTVLAQAWKEDAEGGHLLASLYELFGESMFSFTRKSELYFFL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009433
(535 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2010667 - symbol:TAFII59 "TATA BOX ASSOCIATED ... 1542 2.9e-158 1
DICTYBASE|DDB_G0288471 - symbol:taf6 "TATA-binding protei... 523 1.1e-88 3
ASPGD|ASPL0000017134 - symbol:AN8232 species:162425 "Emer... 701 3.8e-69 1
UNIPROTKB|Q91857 - symbol:taf6 "Transcription initiation ... 383 3.7e-68 2
FB|FBgn0010417 - symbol:Taf6 "TBP-associated factor 6" sp... 380 1.1e-63 2
CGD|CAL0005584 - symbol:TAF60 species:5476 "Candida albic... 370 1.9e-62 2
UNIPROTKB|Q5A2V7 - symbol:TAF6 "Putative uncharacterized ... 370 1.9e-62 2
SGD|S000003080 - symbol:TAF6 "Subunit (60 kDa) of TFIID a... 351 2.3e-60 2
POMBASE|SPCC16C4.18c - symbol:taf6 "histone H4-like TAF T... 511 5.2e-49 1
UNIPROTKB|G8JLM6 - symbol:TAF6 "Transcription initiation ... 381 1.5e-48 2
MGI|MGI:2444957 - symbol:Taf6l "TAF6-like RNA polymerase ... 269 1.1e-37 2
UNIPROTKB|I3LPI1 - symbol:TAF6L "Uncharacterized protein"... 261 2.0e-36 2
UNIPROTKB|E2QUN8 - symbol:TAF6L "Uncharacterized protein"... 262 4.1e-36 2
UNIPROTKB|F1MDZ8 - symbol:TAF6L "Uncharacterized protein"... 264 6.6e-36 2
UNIPROTKB|Q9Y6J9 - symbol:TAF6L "TAF6-like RNA polymerase... 252 2.8e-35 2
ZFIN|ZDB-GENE-030131-6789 - symbol:taf6l "TAF6-like RNA p... 249 5.5e-35 2
UNIPROTKB|Q58DG7 - symbol:TAF6 "TBP-associated factor 6 i... 387 3.3e-34 1
UNIPROTKB|J9NS44 - symbol:TAF6 "Uncharacterized protein" ... 387 3.3e-34 1
MGI|MGI:109129 - symbol:Taf6 "TAF6 RNA polymerase II, TAT... 387 3.3e-34 1
RGD|1311608 - symbol:Taf6 "TAF6 RNA polymerase II, TATA b... 387 3.3e-34 1
UNIPROTKB|E2RFB9 - symbol:TAF6 "Uncharacterized protein" ... 387 3.7e-34 1
UNIPROTKB|P49848 - symbol:TAF6 "Transcription initiation ... 385 7.1e-34 1
UNIPROTKB|J3KR72 - symbol:TAF6 "Transcription initiation ... 385 9.7e-34 1
ZFIN|ZDB-GENE-040912-23 - symbol:taf6 "TAF6 RNA polymeras... 375 1.3e-32 1
UNIPROTKB|C9JTY6 - symbol:TAF6 "Transcription initiation ... 354 3.7e-32 1
RGD|1310123 - symbol:Taf6l "TAF6-like RNA polymerase II, ... 218 3.5e-31 2
UNIPROTKB|C9JFL8 - symbol:TAF6 "Transcription initiation ... 270 3.5e-28 2
UNIPROTKB|E5RHA1 - symbol:TAF6 "Transcription initiation ... 290 5.8e-25 1
UNIPROTKB|C9JIS2 - symbol:TAF6 "Transcription initiation ... 277 1.6e-23 1
UNIPROTKB|C9J088 - symbol:TAF6 "Transcription initiation ... 270 9.2e-23 1
FB|FBgn0014342 - symbol:mia "meiosis I arrest" species:72... 256 3.6e-18 2
UNIPROTKB|C9J7C4 - symbol:TAF6 "Transcription initiation ... 221 2.0e-17 1
UNIPROTKB|F8WEJ7 - symbol:TAF6 "Transcription initiation ... 212 1.9e-16 1
UNIPROTKB|E9PP94 - symbol:TAF6L "TAF6-like RNA polymerase... 198 6.1e-15 1
UNIPROTKB|E5RKA5 - symbol:TAF6 "Transcription initiation ... 192 2.7e-14 1
WB|WBGene00021363 - symbol:taf-6.2 species:6239 "Caenorha... 193 5.3e-13 2
WB|WBGene00006387 - symbol:taf-6.1 species:6239 "Caenorha... 154 9.0e-08 1
UNIPROTKB|C9JHQ8 - symbol:TAF6 "Transcription initiation ... 131 1.0e-07 1
>TAIR|locus:2010667 [details] [associations]
symbol:TAFII59 "TATA BOX ASSOCIATED FACTOR II 59"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA;ISS] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0009860
"pollen tube growth" evidence=IMP] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 InterPro:IPR016024
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 EMBL:CP002684 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006352
GO:GO:0009860 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0003743
EMBL:AC004809 GO:GO:0051090 KO:K03131 HSSP:P49847 OMA:LEMIYSL
UniGene:At.46000 EMBL:AY050962 EMBL:AY091292 EMBL:AY463621
IPI:IPI00521178 PIR:A86183 RefSeq:NP_001030969.1 RefSeq:NP_171987.1
RefSeq:NP_849592.1 UniGene:At.47479 ProteinModelPortal:Q9MAU3
SMR:Q9MAU3 IntAct:Q9MAU3 STRING:Q9MAU3 PRIDE:Q9MAU3
EnsemblPlants:AT1G04950.1 EnsemblPlants:AT1G04950.2
EnsemblPlants:AT1G04950.3 GeneID:839370 KEGG:ath:AT1G04950
TAIR:At1g04950 InParanoid:Q9MAU3 PhylomeDB:Q9MAU3
ProtClustDB:CLSN2681958 ArrayExpress:Q9MAU3 Genevestigator:Q9MAU3
Uniprot:Q9MAU3
Length = 549
Score = 1542 (547.9 bits), Expect = 2.9e-158, P = 2.9e-158
Identities = 316/552 (57%), Positives = 399/552 (72%)
Query: 1 MSIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTAND 60
MSIVPKET+EVIAQSIG+ NL + AL LAPDVEYRVREIMQEAIKCMRH+ RT LTA+D
Sbjct: 1 MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD 60
Query: 61 VDSALNLRNVEPIYGFASGDSLRFKRASGLKDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
VD ALNLRNVEPIYGFASG RF++A G +DL+Y DD++V+ ++VIE PLPKAPLDT +
Sbjct: 61 VDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEI 120
Query: 121 AVHWLAIEGVQPAIPENAPVDAVSDGRRSEYRE--DGISVDIRLPVKHVLSKELQLYFDK 178
HWLAIEGVQPAIPENAP++ + ++ E DG +D+RLPVKHVLS+ELQLYF K
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQKDGPLIDVRLPVKHVLSRELQLYFQK 180
Query: 179 IRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVVTRSLKNFSLLFALMRVA 238
I EL +S+SN ++K+AL+SLA DSGLHPLVPYFT FI++EV + L +F LLF LM +
Sbjct: 181 IAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEV-SNGLNDFRLLFNLMHIV 239
Query: 239 RSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFSDNHWDLRNFVADLIASICTRFGHV 298
RSLL+NPHIHIEPYLHQ+MPSV+TCLVS++LGNRF+DNHW+LR+F A+L++ IC R+G V
Sbjct: 240 RSLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAANLVSLICKRYGTV 299
Query: 299 YQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLILPNLELYLKFLEPEM 358
Y LQSR+TRTL++A LDP K+L+QHYGAIQGLAALG +VV LLIL NLE YL LEPE+
Sbjct: 300 YITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPEL 359
Query: 359 LLEKQKNEMKRHEAWRVYGALQCAAGLCVYDRLKTVLLRP-PKQSRWESNR-KGMIVF-- 414
EKQKN+MK +EAWRVYGAL AAGLC++ RLK P P S + KG I+
Sbjct: 360 NAEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLHKGKGKGKIISTD 419
Query: 415 PSKRKASMDNLMLQPPVKKMATL-GPMGV----------MPVNSMAVNMQGPSGGFSTPV 463
P KRK S+D+ Q P K++ T+ GP GV M V++ N P P
Sbjct: 420 PHKRKLSVDSSENQSPQKRLITMDGPDGVHSQDQSGSAPMQVDNPVENDNPPQNSVQ-PS 478
Query: 464 EGPRAGVSMLRHLQNEKMLRREVSNQALKTSTVLAQAWKEDAEGGHLLASLYELFGESMF 523
+A + +N K+ + ++A+ +L Q WK+D + G LL L+EL+G+ +
Sbjct: 479 SSEQASDANESESRNGKV-KESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRIL 537
Query: 524 SFTRKSELYFFL 535
F +E+ FL
Sbjct: 538 PFIPSTEMSVFL 549
>DICTYBASE|DDB_G0288471 [details] [associations]
symbol:taf6 "TATA-binding protein-associated-factor"
species:44689 "Dictyostelium discoideum" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0005669 "transcription factor TFIID complex" evidence=ISS]
[GO:0000124 "SAGA complex" evidence=ISS] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 dictyBase:DDB_G0288471 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016568 GenomeReviews:CM000154_GR
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AAFI02000111 GO:GO:0000124
GO:GO:0006367 GO:GO:0051090 GO:GO:0005669 eggNOG:COG5095 KO:K03131
OMA:EPLYGYD RefSeq:XP_636709.1 ProteinModelPortal:Q54IW7
STRING:Q54IW7 EnsemblProtists:DDB0231094 GeneID:8626641
KEGG:ddi:DDB_G0288471 InParanoid:Q54IW7 ProtClustDB:CLSZ2730274
Uniprot:Q54IW7
Length = 542
Score = 523 (189.2 bits), Expect = 1.1e-88, Sum P(3) = 1.1e-88
Identities = 108/228 (47%), Positives = 152/228 (66%)
Query: 157 SVDIRLPVKHVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFI 216
S ++ VKHVLSKE+Q++++KI +V N +F AL SL DS LH L+PYF FI
Sbjct: 240 STIVKPTVKHVLSKEIQMFYEKITN-SVKSDNQKLFDAALHSLKSDSSLHQLLPYFINFI 298
Query: 217 SEEVVTRSLKNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFSDN 276
S +V T++L N LL LM++A+++L + H+ E YLHQ+MPS++TCLV K+L N S+N
Sbjct: 299 SVQV-TQNLTNLELLNRLMKMAQAILESKHLKPELYLHQLMPSILTCLVGKKLCNSPSEN 357
Query: 277 HWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGP 336
HW+LR+F A L++ +C +FG VY +LQ R+T+TL+ D TK L+ HYGAI GL+ LG
Sbjct: 358 HWELRDFAARLVSFVCRKFGDVYSSLQGRITKTLVQTLHDTTKPLTTHYGAIVGLSGLGR 417
Query: 337 SVVHLLILPNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCAAG 384
+V+ L+LP + Y K LEPE L N +K EA RV ++ A G
Sbjct: 418 NVIQFLLLPYVPKYYKLLEPE-LNNNLSNPIKSMEANRVLNSIIDATG 464
Score = 354 (129.7 bits), Expect = 1.1e-88, Sum P(3) = 1.1e-88
Identities = 66/142 (46%), Positives = 103/142 (72%)
Query: 1 MSIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTAND 60
MS++P +TI++IA+S G+ NL ++A LA DVEYR+REI QEAIK M+H+ R L+ +D
Sbjct: 1 MSVLPNDTIKIIAESAGISNLPDEIAQQLASDVEYRIREIAQEAIKFMKHSKRDHLSTDD 60
Query: 61 VDSALNLRNVEPIYGFA--SGDS--LRF-KRASGLKDLYYIDDKDVELRNVIETPLPKAP 115
+++AL LRN+E +YG++ + D L+F K + + +Y+++DK++ + + PLPK P
Sbjct: 61 INNALGLRNIEQLYGYSCSANDHSLLKFQKTTTTTQAIYFLNDKEMTFQEIASQPLPKVP 120
Query: 116 LDTSVAVHWLAIEGVQPAIPEN 137
D S++ HWLA+EGVQP IP+N
Sbjct: 121 RDPSLSAHWLALEGVQPLIPQN 142
Score = 41 (19.5 bits), Expect = 1.1e-88, Sum P(3) = 1.1e-88
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 513 SLYELFGESMFSFTR 527
SL++LFGE + ++ +
Sbjct: 516 SLFDLFGEKLLAYIK 530
>ASPGD|ASPL0000017134 [details] [associations]
symbol:AN8232 species:162425 "Emericella nidulans"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 EMBL:BN001302 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0003743 GO:GO:0051090 EMBL:AACD01000144
eggNOG:COG5095 KO:K03131 HOGENOM:HOG000159894 OMA:EPLYGYD
OrthoDB:EOG45XC4M RefSeq:XP_681501.1 ProteinModelPortal:Q5ATZ8
STRING:Q5ATZ8 EnsemblFungi:CADANIAT00004284 GeneID:2869223
KEGG:ani:AN8232.2 Uniprot:Q5ATZ8
Length = 445
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 156/396 (39%), Positives = 236/396 (59%)
Query: 1 MSIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTAND 60
MS+ + I +A+S+G+ NL++DV LA DVEYR+ ++++EA+K MRH+ RT+LT D
Sbjct: 1 MSVWNPDNIRDVAESVGIVNLNNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQD 60
Query: 61 VDSALNLRNVEPIYGFASGDSLRFKRAS-GL-KDLYYIDDKDVELRNVIETPLPKAPLDT 118
+ AL + +VEP+YG+ + L+F AS G + L+Y++D++V+ +I PLP+ P +
Sbjct: 61 IALALRVLDVEPLYGYETTRPLKFGEASLGPGQPLFYVEDEEVDFEKLINAPLPRVPREI 120
Query: 119 SVAVHWLAIEGVQPAIPENAPVDAVSDGRRSEYREDGISVDIRL------------P-VK 165
S HWLA+EGVQP+IP+N P A D R E G + + L P VK
Sbjct: 121 SFTAHWLAVEGVQPSIPQN-PTAA--DSRNLELMSKGPNANATLAAMSGNGNVAVKPLVK 177
Query: 166 HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVVTRSL 225
HVLSKELQLYF+K+ + S+ SL D GLH LVPYF FISE+V T L
Sbjct: 178 HVLSKELQLYFEKVCNAFLDESSEKYRTSGYASLREDPGLHQLVPYFVQFISEKV-THGL 236
Query: 226 KNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-DNHWDLRNFV 284
K+ +L +M +A +L++N ++++PY+ ++P ++TCL+ ++LG + LR+
Sbjct: 237 KDIFVLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGTADLSEQFALRDLA 296
Query: 285 ADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPS-VVHLLI 343
A L+ I T++ H L+ R+ R+ L LDP+K HYGAI GL A+G S V +LI
Sbjct: 297 AALLGLIATKYSHSSHTLKPRLARSCLKTLLDPSKPFGAHYGAIIGLHAVGGSEAVRVLI 356
Query: 344 LPNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGAL 379
+PNL +Y L+ + + +R EA +V G L
Sbjct: 357 IPNLPIYGNLLKDGLA----DDSARRPEAEKVLGLL 388
>UNIPROTKB|Q91857 [details] [associations]
symbol:taf6 "Transcription initiation factor TFIID subunit
6" species:8355 "Xenopus laevis" [GO:0071339 "MLL1 complex"
evidence=ISS] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0071339
GO:GO:0051090 KO:K03131 CTD:6878 HOVERGEN:HBG012489 EMBL:D50054
EMBL:BC068776 PIR:JC4366 RefSeq:NP_001081232.1 UniGene:Xl.3836
ProteinModelPortal:Q91857 GeneID:397724 KEGG:xla:397724
Xenbase:XB-GENE-5774722 Uniprot:Q91857
Length = 618
Score = 383 (139.9 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 91/242 (37%), Positives = 136/242 (56%)
Query: 110 PLPKAPLDTSVAVHW-LAIEGVQPAIPENAPVDAVSDGRRSEYRE-DGISVDIRLPVKHV 167
P+PK T +A G + +P G+ + +G + ++ H
Sbjct: 149 PVPKEQQKTEATEPLKVAKPGQEEGLPGKGQGSGEGKGKEKKTAILEGAPLKLKPRSIHE 208
Query: 168 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVVTRSLKN 227
LS E QLY+ +I E V S +AL S+A D GL+ ++P F+ FISE V ++N
Sbjct: 209 LSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQN 267
Query: 228 -FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-DNHWDLRNFVA 285
+LL LMR+ ++L+ NP +++E YLH+++P+V+TC+VS++L R DNHW LR+F A
Sbjct: 268 NLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAA 327
Query: 286 DLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLILP 345
LIA IC F N+QSR+T+T ++D + YG+I GLA LGP VV LI+P
Sbjct: 328 RLIAQICKNFSTTTNNIQSRITKTFTKTWVDDRTPWTTRYGSIAGLAELGPDVVKTLIVP 387
Query: 346 NL 347
L
Sbjct: 388 RL 389
Score = 358 (131.1 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 64/139 (46%), Positives = 102/139 (73%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++VI++S+G+ +S + LA +V +R++E+ Q+A+K M R LT +D+
Sbjct: 10 TLLPSESMKVISESVGISQMSEETCQLLAQEVSFRIKEVTQDALKFMHVGKRQKLTPSDI 69
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
D+AL L+NVEPIYGF + L F+ ASG ++L++ ++K+ +L ++I TPLP+ PLD S+
Sbjct: 70 DAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETDLSDIISTPLPRVPLDVSL 129
Query: 121 AVHWLAIEGVQPAIPENAP 139
HWL+IEGVQPAIPEN P
Sbjct: 130 KAHWLSIEGVQPAIPENPP 148
>FB|FBgn0010417 [details] [associations]
symbol:Taf6 "TBP-associated factor 6" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000124 "SAGA complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
EMBL:AE014296 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0022008
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 GO:GO:0005669
GO:GO:0051123 eggNOG:COG5095 KO:K03131 GeneTree:ENSGT00640000091486
EMBL:AY051702 EMBL:U06459 EMBL:L25443 RefSeq:NP_524161.2
UniGene:Dm.2802 PDB:1TAF PDBsum:1TAF ProteinModelPortal:P49847
SMR:P49847 DIP:DIP-772N DIP:DIP-778N IntAct:P49847 MINT:MINT-755268
STRING:P49847 PaxDb:P49847 EnsemblMetazoa:FBtr0074941 GeneID:40134
KEGG:dme:Dmel_CG32211 CTD:6878 FlyBase:FBgn0010417
InParanoid:P49847 OMA:KQLATHE OrthoDB:EOG434TN9 PhylomeDB:P49847
EvolutionaryTrace:P49847 GenomeRNAi:40134 NextBio:817166
Bgee:P49847 GermOnline:CG32211 Uniprot:P49847
Length = 606
Score = 380 (138.8 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 85/205 (41%), Positives = 124/205 (60%)
Query: 157 SVDIRLPVKHVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFI 216
++ ++ H LS E QLY+ +I E V S+ +AL SL D GLH ++P FI
Sbjct: 200 TIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTFI 258
Query: 217 SEEVVTRSLKN-FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS- 274
+E V ++N +LL LMR+ R+LL NP + +E YLH+++PSV+TC+VSK+L R
Sbjct: 259 AEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPEL 318
Query: 275 DNHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAAL 334
DNHW LR+F + L+A IC F + NLQ+RVTR A + LS YG+I GL+ L
Sbjct: 319 DNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSEL 378
Query: 335 GPSVVHLLILPNLELYLKFLEPEML 359
G V+ + I+P L+ + +EP +L
Sbjct: 379 GGEVIKVFIIPRLKFISERIEPHLL 403
Score = 320 (117.7 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 62/139 (44%), Positives = 93/139 (66%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
S + E+++VIA+SIGV +LS D A LA DV +++ I+Q+A K M HA R L+ D+
Sbjct: 19 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDI 78
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
D +L +RNVEP YGF + D + F+ ASG ++L++ +DK+++L + T K PLD ++
Sbjct: 79 DMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLDLTL 138
Query: 121 AVHWLAIEGVQPAIPENAP 139
HW +EGVQP +PEN P
Sbjct: 139 RSHWFVVEGVQPTVPENPP 157
>CGD|CAL0005584 [details] [associations]
symbol:TAF60 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0000124 "SAGA
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
InterPro:IPR016024 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
CGD:CAL0005584 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000074 GO:GO:0051090 eggNOG:COG5095
KO:K03131 HOGENOM:HOG000159894 RefSeq:XP_716115.1
ProteinModelPortal:Q5A2V7 STRING:Q5A2V7 GeneID:3642252
KEGG:cal:CaO19.7454 Uniprot:Q5A2V7
Length = 519
Score = 370 (135.3 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 84/227 (37%), Positives = 133/227 (58%)
Query: 158 VDIRLPVKHVLSKELQLYFDKIRELTVSRS--NSTVFKQALLSLAMDSGLHPLVPYFTYF 215
++I+ +KHVLSKEL+LYFDK+ ++ +S + AL SL D GLH LVPYF F
Sbjct: 219 MEIKPLIKHVLSKELKLYFDKVVDVLISTDPEKEHLKNAALTSLKSDPGLHQLVPYFIQF 278
Query: 216 ISEEVVTRSLKNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG----- 270
I+E++ T L+N +L ++ V +L+ N I ++PY+H +MP ++T L++KR+G
Sbjct: 279 IAEQI-TNQLRNIEILSTMLEVISALVDNKTIFLDPYVHALMPCILTLLLAKRIGPVIKL 337
Query: 271 NRFSDNHWD--------LRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLS 322
+ + W +R F A L+ I +G Y L+ R+TRTLL A LD TK +
Sbjct: 338 TQENKEEWQDALKSQLAIREFAAILLQHIIKVYGSSYSTLRPRITRTLLRALLDSTKPVG 397
Query: 323 QHYGAIQGLAALGPSVVHLLILPNLELYLKFLEPEMLLEKQKNEMKR 369
YGA+ GL +G V+ L++L NL+++ ++EK +N+ +R
Sbjct: 398 TQYGALLGLKNMGNEVLKLVLLGNLKVWYS-----AIIEKNENDYER 439
Score = 309 (113.8 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 59/136 (43%), Positives = 87/136 (63%)
Query: 5 PKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDSA 64
P +T+ A S+GV +S + A +LA DVEY + EI++ A+K MRH+ R LT +DV +A
Sbjct: 14 PYDTVRDAADSLGV-TISDETAKSLAMDVEYHIHEIIETAVKFMRHSKRRQLTTSDVSNA 72
Query: 65 LNLRNVEPIYGFASGDSLRFKRA---SGLKDLYYIDDKDVELRNVIETPLPKAPLDTSVA 121
L + N+EP+YG+ + L +K +G + LYYID+ ++E +I LPK P +
Sbjct: 73 LKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFEKLINQQLPKVPRQVNFT 132
Query: 122 VHWLAIEGVQPAIPEN 137
HWLAIEGVQP +P+N
Sbjct: 133 AHWLAIEGVQPMVPQN 148
>UNIPROTKB|Q5A2V7 [details] [associations]
symbol:TAF6 "Putative uncharacterized protein TAF6"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 InterPro:IPR016024
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 CGD:CAL0005584
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000074 GO:GO:0051090 eggNOG:COG5095 KO:K03131
HOGENOM:HOG000159894 RefSeq:XP_716115.1 ProteinModelPortal:Q5A2V7
STRING:Q5A2V7 GeneID:3642252 KEGG:cal:CaO19.7454 Uniprot:Q5A2V7
Length = 519
Score = 370 (135.3 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 84/227 (37%), Positives = 133/227 (58%)
Query: 158 VDIRLPVKHVLSKELQLYFDKIRELTVSRS--NSTVFKQALLSLAMDSGLHPLVPYFTYF 215
++I+ +KHVLSKEL+LYFDK+ ++ +S + AL SL D GLH LVPYF F
Sbjct: 219 MEIKPLIKHVLSKELKLYFDKVVDVLISTDPEKEHLKNAALTSLKSDPGLHQLVPYFIQF 278
Query: 216 ISEEVVTRSLKNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG----- 270
I+E++ T L+N +L ++ V +L+ N I ++PY+H +MP ++T L++KR+G
Sbjct: 279 IAEQI-TNQLRNIEILSTMLEVISALVDNKTIFLDPYVHALMPCILTLLLAKRIGPVIKL 337
Query: 271 NRFSDNHWD--------LRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLS 322
+ + W +R F A L+ I +G Y L+ R+TRTLL A LD TK +
Sbjct: 338 TQENKEEWQDALKSQLAIREFAAILLQHIIKVYGSSYSTLRPRITRTLLRALLDSTKPVG 397
Query: 323 QHYGAIQGLAALGPSVVHLLILPNLELYLKFLEPEMLLEKQKNEMKR 369
YGA+ GL +G V+ L++L NL+++ ++EK +N+ +R
Sbjct: 398 TQYGALLGLKNMGNEVLKLVLLGNLKVWYS-----AIIEKNENDYER 439
Score = 309 (113.8 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 59/136 (43%), Positives = 87/136 (63%)
Query: 5 PKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDSA 64
P +T+ A S+GV +S + A +LA DVEY + EI++ A+K MRH+ R LT +DV +A
Sbjct: 14 PYDTVRDAADSLGV-TISDETAKSLAMDVEYHIHEIIETAVKFMRHSKRRQLTTSDVSNA 72
Query: 65 LNLRNVEPIYGFASGDSLRFKRA---SGLKDLYYIDDKDVELRNVIETPLPKAPLDTSVA 121
L + N+EP+YG+ + L +K +G + LYYID+ ++E +I LPK P +
Sbjct: 73 LKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFEKLINQQLPKVPRQVNFT 132
Query: 122 VHWLAIEGVQPAIPEN 137
HWLAIEGVQP +P+N
Sbjct: 133 AHWLAIEGVQPMVPQN 148
>SGD|S000003080 [details] [associations]
symbol:TAF6 "Subunit (60 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0046695
"SLIK (SAGA-like) complex" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0001075 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity involved in preinitiation complex assembly" evidence=IC]
[GO:0000124 "SAGA complex" evidence=IDA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0016568
"chromatin modification" evidence=IDA] [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IDA;IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0032947 "protein complex scaffold" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
SGD:S000003080 EMBL:BK006941 GO:GO:0016573 GO:GO:0003682
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0046695
GO:GO:0032947 GO:GO:0051090 GO:GO:0001102 EMBL:X97644 GO:GO:0005669
GO:GO:0051123 EMBL:Z72634 eggNOG:COG5095 KO:K03131
GeneTree:ENSGT00640000091486 HOGENOM:HOG000159894 OrthoDB:EOG45XC4M
EMBL:L40145 EMBL:AY723809 PIR:S64120 RefSeq:NP_011403.1
ProteinModelPortal:P53040 SMR:P53040 DIP:DIP-981N IntAct:P53040
MINT:MINT-405577 STRING:P53040 PaxDb:P53040 PeptideAtlas:P53040
EnsemblFungi:YGL112C GeneID:852766 KEGG:sce:YGL112C CYGD:YGL112c
OMA:LEMIYSL NextBio:972224 Genevestigator:P53040 GermOnline:YGL112C
Uniprot:P53040
Length = 516
Score = 351 (128.6 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 90/254 (35%), Positives = 144/254 (56%)
Query: 105 NVIETPLPKAPLDTSVAVHWLAIEGVQPAIPENAPVDAVSDGRRSEYRED---GISVDIR 161
N+ + + + P V L +Q + +V+D S++ + G + +++
Sbjct: 153 NLNDIRVSQPPFIRGAIVTALNDNSLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVK 212
Query: 162 LPVKHVLSKELQLYFDK-IRELTV-SRSNSTV--FKQALL-SLAMDSGLHPLVPYFTYFI 216
VKHVLSKELQ+YF+K I LT S+++ KQA L SL DSGLH LVPYF FI
Sbjct: 213 PLVKHVLSKELQIYFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFI 272
Query: 217 SEEVVTRSLKNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG------ 270
+E++ T++L + LL ++ + SLL N I ++PY+H +MPS++T L++K+LG
Sbjct: 273 AEQI-TQNLSDLQLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDD 331
Query: 271 -----NRFSDNHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHY 325
+ F + LR+F A L+ + +F Y++L+ RVTRTLL FLD + +Y
Sbjct: 332 SPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYY 391
Query: 326 GAIQGLAAL-GPSV 338
G ++G++ L G S+
Sbjct: 392 GCLKGVSVLEGESI 405
Score = 320 (117.7 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 61/139 (43%), Positives = 95/139 (68%)
Query: 5 PKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDSA 64
P++T++ +A+S+G+ N++ DV ALA DVEYR+ EI+++A+K RH+ R VLT +DV A
Sbjct: 13 PQDTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKA 72
Query: 65 LNLRNVEPIYGFASGDSLR----FKRA--SGLKDLYYIDDKDVELRNVIETPLPKAPLDT 118
L + NVEP+YG+ G + F + SG + +YY+D+++V+ +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLP 132
Query: 119 SVAVHWLAIEGVQPAIPEN 137
+ HWLA+EGVQPAI +N
Sbjct: 133 TFTTHWLAVEGVQPAIIQN 151
Score = 56 (24.8 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 23/87 (26%), Positives = 41/87 (47%)
Query: 301 NLQSRVTRTLLHAFLDPTKSLSQHYGAIQ-GL-AALGPSVVHLLILPNLELYLKFLEPEM 358
+LQ+ VT T A + T + SQH ++ G + P V H+L L++Y + +
Sbjct: 177 SLQTPVTSTTASASVTDTGA-SQHLSNVKPGQNTEVKPLVKHVLS-KELQIYFNKVISTL 234
Query: 359 LLEKQKNEMKRHEAWRVYGALQCAAGL 385
+ Q +E +H +L+ +GL
Sbjct: 235 TAKSQADEAAQHMKQAALTSLRTDSGL 261
>POMBASE|SPCC16C4.18c [details] [associations]
symbol:taf6 "histone H4-like TAF Taf6, SAGA complex
subunit" species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA
complex" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005669 "transcription factor TFIID complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IC] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISO]
[GO:0016573 "histone acetylation" evidence=IC] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 InterPro:IPR016024 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 PomBase:SPCC16C4.18c GO:GO:0005829 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0016573 GO:GO:0006338 GO:GO:0000790
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0006367
GO:GO:0051090 GO:GO:0005669 eggNOG:COG5095 KO:K03131 PIR:T41108
RefSeq:NP_587928.1 HSSP:P49847 ProteinModelPortal:O74462
STRING:O74462 EnsemblFungi:SPCC16C4.18c.1 GeneID:2539133
KEGG:spo:SPCC16C4.18c HOGENOM:HOG000159894 OMA:EPLYGYD
OrthoDB:EOG45XC4M NextBio:20800305 Uniprot:O74462
Length = 452
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 124/322 (38%), Positives = 186/322 (57%)
Query: 107 IETPLPKAPLDTSVAVHWLAIEGVQPAIPENAPVDAVSDGRRSEYREDGISVDIRLPVKH 166
++ +P+ P + V A +G +P + A + R D +V+I+ V+H
Sbjct: 135 VQPAIPQNPTPSDHTVGEWASKGTSGVMPGAST--AAKEARNGVTSMD--NVEIKPLVRH 190
Query: 167 VLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVVTRSLK 226
VLSKELQLYF++I + +N + AL SL D GLH L+PYF F+S+ V TR+L
Sbjct: 191 VLSKELQLYFERITSALLDETNVELRDAALSSLRDDPGLHQLLPYFIMFLSDSV-TRNLG 249
Query: 227 NFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFSDN-HWDLRNFVA 285
N +L LM +A +LL NP++ +EPY+ Q+MPS++TCLV+KRLG+ +++ H+ LR+ A
Sbjct: 250 NLVVLTTLMHMAWALLDNPNLFVEPYVQQLMPSILTCLVAKRLGSDPNNHEHYALRDLAA 309
Query: 286 DLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLILP 345
L+ +C RFG+VY L+ RVTRT L AFLD TK S HYGAI+GL +G + +L++P
Sbjct: 310 FLLGIVCDRFGNVYYTLKPRVTRTALKAFLDNTKPYSTHYGAIKGLKTMGKEAIRVLVVP 369
Query: 346 NLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCAAGLCVYDRLKTVLLRPPKQSRWE 405
N+++Y + LEK NE + +EA + AL A L D+L PP S
Sbjct: 370 NIKVYEVLVRKT--LEKG-NEEEIYEANKCMDALYDALLLLRDDQLPNQRTLPPNASGLL 426
Query: 406 SNRKGMIVFPSKRKASMDNLML 427
G ++ K + +L+L
Sbjct: 427 EKNVGSLMAEKIMKENDTSLLL 448
Score = 354 (129.7 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 72/154 (46%), Positives = 101/154 (65%)
Query: 7 ETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDSALN 66
E+I+ +A+ +G+ NL+ + A A+A D+EYR+ +++QEA K M H+ RTVLT+ D+ SAL
Sbjct: 9 ESIKDVAEMLGIGNLADEPAAAIAMDLEYRIHQVVQEATKFMVHSKRTVLTSADISSALR 68
Query: 67 LRNVEPIYGFASGDSLRFKRAS---GLKDLYYIDDKDVELRNVIETPLPKAPLDTSVAVH 123
NVEP+YGF + L F A+ G LYY+DD++V+ +I PLPK P + S + H
Sbjct: 69 TLNVEPLYGFNNSRPLEFHEAAVGAGQNSLYYLDDEEVDFEKIINAPLPKVPRNISYSAH 128
Query: 124 WLAIEGVQPAIPENAPVDAVSDGRRSEYREDGIS 157
WLAIEGVQPAIP+N P SD E+ G S
Sbjct: 129 WLAIEGVQPAIPQN-PTP--SDHTVGEWASKGTS 159
Score = 40 (19.1 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 453 QGPSG---GFSTPVEGPRAGVSMLRHLQNEKMLRREVSNQ 489
+G SG G ST + R GV+ + +++ + ++R +S +
Sbjct: 156 KGTSGVMPGASTAAKEARNGVTSMDNVEIKPLVRHVLSKE 195
>UNIPROTKB|G8JLM6 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR011442 Pfam:PF07571
GO:GO:0005634 GO:GO:0005737 GO:GO:0051090 EMBL:AC073842
HGNC:HGNC:11540 ProteinModelPortal:G8JLM6 SMR:G8JLM6
Ensembl:ENST00000418432 Bgee:G8JLM6 Uniprot:G8JLM6
Length = 601
Score = 381 (139.2 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 91/248 (36%), Positives = 142/248 (57%)
Query: 113 KAPLDTSVAVHWLAIEGVQPAIPENAPVDA------VSDGRRSEYREDGI--SVDIRLPV 164
KAP + A ++ +P E+ P+ +DG+ E + + +RL
Sbjct: 75 KAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKP 134
Query: 165 K--HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVVT 222
+ H LS E QLY+ +I E V S +AL S+A D GL+ ++P F+ FISE V
Sbjct: 135 RSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRV 193
Query: 223 RSLKN-FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-DNHWDL 280
++N +LL LMR+ ++L+ NP +++E Y+H+++P+V+TC+VS++L R DNHW L
Sbjct: 194 NVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWAL 253
Query: 281 RNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVH 340
R+F A L+A IC F N+QSR+T+T +++D + YG+I GLA LG V+
Sbjct: 254 RDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIK 313
Query: 341 LLILPNLE 348
LILP L+
Sbjct: 314 TLILPRLQ 321
Score = 174 (66.3 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 33/71 (46%), Positives = 51/71 (71%)
Query: 48 MRHAHRTVLTANDVDSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNV 106
M R LT +D+D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 107 IETPLPKAPLD 117
I TPLP+ PLD
Sbjct: 61 INTPLPRVPLD 71
>MGI|MGI:2444957 [details] [associations]
symbol:Taf6l "TAF6-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
MGI:MGI:2444957 GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0051090 CTD:10629 eggNOG:COG5095
HOGENOM:HOG000059613 HOVERGEN:HBG061566 KO:K03131 OrthoDB:EOG498V0F
EMBL:AK077149 EMBL:BC028647 IPI:IPI00153596 IPI:IPI00405376
RefSeq:NP_001171269.1 RefSeq:NP_666204.2 UniGene:Mm.220886
ProteinModelPortal:Q8R2K4 SMR:Q8R2K4 IntAct:Q8R2K4 STRING:Q8R2K4
PhosphoSite:Q8R2K4 PRIDE:Q8R2K4 Ensembl:ENSMUST00000177056
GeneID:225895 KEGG:mmu:225895 UCSC:uc008gmx.2 UCSC:uc008gmy.2
GeneTree:ENSGT00640000091486 InParanoid:Q8R2K4 NextBio:377857
Bgee:Q8R2K4 Genevestigator:Q8R2K4 GermOnline:ENSMUSG00000003680
Uniprot:Q8R2K4
Length = 616
Score = 269 (99.8 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
Identities = 83/294 (28%), Positives = 141/294 (47%)
Query: 168 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISE-EVVTRSLK 226
L+ +L Y+ ++ + + + K AL L +S + L+PYF Y +S + V+ L+
Sbjct: 153 LTDDLLKYYQQVTRAVLG-DDPQLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLE 211
Query: 227 NFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFV 284
L L++VARSL+RNPH+ + PY+ ++ SV+ C++ N +D HW LR+
Sbjct: 212 Q---LHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGA 267
Query: 285 ADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLIL 344
A L++ I G + L ++ +L DP + L HYGA+ GL ALG V ++
Sbjct: 268 ALLLSHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLY 327
Query: 345 PNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCAAGLCVYDRLKTVLLRPPKQSRW 404
P+L Y L+ + N + + +VYGA+ L +RL + + + +R
Sbjct: 328 PHLPTYWTNLQAVLDDYSVSNAQVKADGHKVYGAI-----LVAVERLLKMKAQAAEPNRG 382
Query: 405 ESNRKGMIVFPSKRKASMDNLMLQ--PPVKKMATLGPMGVMPVNSMAVNMQGPS 456
+G + D+L+LQ PP T G+ P + +A + PS
Sbjct: 383 GLGGRG---YRPAEDLPWDSLLLQESPPGGSSETGFGSGLPPPSGVA-GPEDPS 432
Score = 210 (79.0 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
Identities = 50/142 (35%), Positives = 83/142 (58%)
Query: 4 VPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDS 63
+P+E++ ++A+S G+ LS +VA LA DV YR+RE Q + + M+H R LT D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALNLRNVEPIYGFASGDSLRFKRASGLKDLYYIDDKDVELRNV-IETPLPKAPLDTSVAV 122
AL +VE + G+ S ++L + A DLY+ +D++V L + + T +PK +T+V V
Sbjct: 71 ALRWSSVEAVCGYGSQEALPLRPARE-GDLYFPEDREVSLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPAIPENAPVDAVS 144
H ++G P+ + AVS
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVS 151
>UNIPROTKB|I3LPI1 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 OMA:MPQLTAN
GeneTree:ENSGT00640000091486 EMBL:FP312617
Ensembl:ENSSSCT00000022269 Uniprot:I3LPI1
Length = 624
Score = 261 (96.9 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 67/218 (30%), Positives = 112/218 (51%)
Query: 168 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISE-EVVTRSLK 226
L+ +L Y+ ++ + + + K AL L +S + L+PYF Y +S + V+ L+
Sbjct: 160 LTDDLLKYYQQVTRAVLG-DDPQLMKIALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLE 218
Query: 227 NFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFV 284
L L++VARSL+RNPH+ + PY+ ++ SV+ C++ N +D HW LR+
Sbjct: 219 Q---LHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGA 274
Query: 285 ADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLIL 344
A L++ I G + L ++ +L DP + L HYGA+ GL ALG V ++
Sbjct: 275 ALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLY 334
Query: 345 PNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCA 382
P+L Y L+ + N + + +VYGA+ A
Sbjct: 335 PHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
Score = 207 (77.9 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 49/142 (34%), Positives = 84/142 (59%)
Query: 4 VPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDS 63
+P+E++ ++A+S G+ LS +VA LA DV YR+RE Q + + M+H R LT D +
Sbjct: 19 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 77
Query: 64 ALNLRNVEPIYGFASGDSLRFKRASGLKDLYYIDDKDVELRNV-IETPLPKAPLDTSVAV 122
AL +VE + G+ S ++L + A +LY+ +D++V L ++ + T +PK +T+V V
Sbjct: 78 ALRWSSVEAVCGYGSQEALPLRPARE-GELYFPEDREVNLVDLALATNIPKGCAETAVRV 136
Query: 123 HWLAIEGVQPAIPENAPVDAVS 144
H ++G P+ + AVS
Sbjct: 137 HVSYLDGKGNLAPQGSVPSAVS 158
Score = 39 (18.8 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 132 PAIPENAPVDAVSDGR 147
PA PEN P+ V R
Sbjct: 519 PAAPENRPLPRVHRAR 534
>UNIPROTKB|E2QUN8 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 CTD:10629
KO:K03131 OMA:MPQLTAN GeneTree:ENSGT00640000091486
EMBL:AAEX03011662 RefSeq:XP_533259.2 Ensembl:ENSCAFT00000024787
GeneID:476051 KEGG:cfa:476051 Uniprot:E2QUN8
Length = 625
Score = 262 (97.3 bits), Expect = 4.1e-36, Sum P(2) = 4.1e-36
Identities = 82/293 (27%), Positives = 140/293 (47%)
Query: 168 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISE-EVVTRSLK 226
L+ +L Y+ ++ + + + K AL L +S + L+PYF Y +S + V+ L+
Sbjct: 160 LTDDLLKYYQQVTRAVLG-DDPQLMKIALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLE 218
Query: 227 NFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFV 284
L L++VARSL+RNPH+ + PY+ ++ SV+ C++ N +D HW LR+
Sbjct: 219 Q---LHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGA 274
Query: 285 ADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLIL 344
A L++ I G + L ++ +L DP + L HYGA+ GL ALG V ++
Sbjct: 275 ALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLY 334
Query: 345 PNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCAAGLCVYDRLKTVLLRPPKQSRW 404
P+L Y L+ + N + + +VYGA+ L +RL + + + ++
Sbjct: 335 PHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAI-----LVAVERLLKMKAQAAEPNKG 389
Query: 405 ESNRKGMIVFPSKRKASMDNLMLQP-PVKKMATLGPMGVMPVNSMAVNMQGPS 456
+ +G+ S D+L+LQ P A G V P+ + PS
Sbjct: 390 GPSGRGV---RSSDDLPWDSLLLQESPSGGGAEPGFGSVHPLPPGGAGPEDPS 439
Score = 203 (76.5 bits), Expect = 4.1e-36, Sum P(2) = 4.1e-36
Identities = 49/142 (34%), Positives = 82/142 (57%)
Query: 4 VPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDS 63
+P+E++ ++A+S G+ LS +VA LA DV YR+RE Q + + M+H R LT D +
Sbjct: 19 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 77
Query: 64 ALNLRNVEPIYGFASGDSLRFKRASGLKDLYYIDDKDVELRNV-IETPLPKAPLDTSVAV 122
AL +VE + G+ S + L + A +LY+ +D++V L + + T +PK +T+V V
Sbjct: 78 ALRWSSVEAVCGYGSQEVLPLRPARE-GELYFPEDREVNLVELALATNIPKGCAETAVRV 136
Query: 123 HWLAIEGVQPAIPENAPVDAVS 144
H ++G P+ + AVS
Sbjct: 137 HVSYLDGKGNLAPQGSVPSAVS 158
>UNIPROTKB|F1MDZ8 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 OMA:MPQLTAN
GeneTree:ENSGT00640000091486 EMBL:DAAA02063486 IPI:IPI00706361
Ensembl:ENSBTAT00000012482 ArrayExpress:F1MDZ8 Uniprot:F1MDZ8
Length = 665
Score = 264 (98.0 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 67/218 (30%), Positives = 113/218 (51%)
Query: 168 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISE-EVVTRSLK 226
L+ +L Y+ ++ + + + K AL L +S + L+PYF Y +S + V+ L+
Sbjct: 199 LTDDLLKYYQQVTRAVLG-DDPQLMKIALHDLQTNSKIAALLPYFVYVVSGVKSVSHDLE 257
Query: 227 NFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFV 284
L L++VARSL+RNPH+ + PY+ ++ SV+ C++ N +D HW LR+
Sbjct: 258 Q---LHRLLQVARSLVRNPHLCLVPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGA 313
Query: 285 ADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLIL 344
A L++ I +G + L ++ +L DP + L HYGA+ GL ALG V ++
Sbjct: 314 ALLLSHIFWTYGDLVNGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLY 373
Query: 345 PNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCA 382
P+L Y L+ + N + + +VYGA+ A
Sbjct: 374 PHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 411
Score = 200 (75.5 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 48/142 (33%), Positives = 82/142 (57%)
Query: 4 VPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDS 63
+P+E++ ++A+S G+ LS +VA LA DV YR+RE Q + + M+H R LT D +
Sbjct: 58 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 116
Query: 64 ALNLRNVEPIYGFASGDSLRFKRASGLKDLYYIDDKDVELRNV-IETPLPKAPLDTSVAV 122
AL +VE + G+ S + L + A +LY+ +D++V L + + T +PK +T++ V
Sbjct: 117 ALRWSSVEAVCGYGSQEVLPLRPARE-GELYFPEDREVNLVELALATNIPKGCAETALRV 175
Query: 123 HWLAIEGVQPAIPENAPVDAVS 144
H ++G P+ + AVS
Sbjct: 176 HVSYLDGKGNLAPQGSVPSAVS 197
>UNIPROTKB|Q9Y6J9 [details] [associations]
symbol:TAF6L "TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 6L"
species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA] [GO:0043966
"histone H3 acetylation" evidence=IDA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0003677 EMBL:CH471076
GO:GO:0006352 GO:GO:0006357 GO:GO:0006338 GO:GO:0003713
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 GO:GO:0043966
GO:GO:0000118 GO:GO:0030914 EMBL:AF069735 EMBL:AK314330
IPI:IPI00007957 RefSeq:NP_006464.1 UniGene:Hs.714400
ProteinModelPortal:Q9Y6J9 SMR:Q9Y6J9 IntAct:Q9Y6J9
MINT:MINT-1456123 STRING:Q9Y6J9 PhosphoSite:Q9Y6J9 DMDM:46577572
PaxDb:Q9Y6J9 PeptideAtlas:Q9Y6J9 PRIDE:Q9Y6J9
Ensembl:ENST00000294168 GeneID:10629 KEGG:hsa:10629 UCSC:uc001nvc.3
CTD:10629 GeneCards:GC11P062538 HGNC:HGNC:17305 MIM:602946
neXtProt:NX_Q9Y6J9 PharmGKB:PA38224 eggNOG:COG5095
HOGENOM:HOG000059613 HOVERGEN:HBG061566 InParanoid:Q9Y6J9 KO:K03131
OMA:MPQLTAN OrthoDB:EOG498V0F PhylomeDB:Q9Y6J9 ChiTaRS:TAF6L
GenomeRNAi:10629 NextBio:40385 ArrayExpress:Q9Y6J9 Bgee:Q9Y6J9
CleanEx:HS_TAF6L Genevestigator:Q9Y6J9 GermOnline:ENSG00000162227
Uniprot:Q9Y6J9
Length = 622
Score = 252 (93.8 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 67/218 (30%), Positives = 110/218 (50%)
Query: 168 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISE-EVVTRSLK 226
L+ +L Y+ ++ + + + K AL L +S + L+PYF Y +S + V+ L+
Sbjct: 153 LTDDLLKYYHQVTRAVLG-DDPQLMKVALQDLQTNSKIGALLPYFVYVVSGVKSVSHDLE 211
Query: 227 NFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFV 284
L L++VARSL RNPH+ + PY+ ++ SV+ C++ N +D HW LR+
Sbjct: 212 Q---LHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGA 267
Query: 285 ADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLIL 344
A L++ I G + L + +L DP + L HYGA+ GL ALG V ++
Sbjct: 268 ALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLY 327
Query: 345 PNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCA 382
P+L Y L+ + N + + +VYGA+ A
Sbjct: 328 PHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
Score = 206 (77.6 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 49/142 (34%), Positives = 83/142 (58%)
Query: 4 VPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDS 63
+P+E++ ++A+S G+ LS +VA LA DV YR+RE Q + + M+H R LT D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALNLRNVEPIYGFASGDSLRFKRASGLKDLYYIDDKDVELRNV-IETPLPKAPLDTSVAV 122
AL +VE + G+ S ++L + A +LY+ +D++V L + + T +PK +T+V V
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPARE-GELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPAIPENAPVDAVS 144
H ++G P+ + AVS
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVS 151
>ZFIN|ZDB-GENE-030131-6789 [details] [associations]
symbol:taf6l "TAF6-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
ZFIN:ZDB-GENE-030131-6789 GO:GO:0005634 GO:GO:0006352
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 CTD:10629 KO:K03131
OMA:MPQLTAN GeneTree:ENSGT00640000091486 EMBL:AL954709
IPI:IPI00901427 RefSeq:NP_001186651.1 UniGene:Dr.75265
Ensembl:ENSDART00000113120 GeneID:557363 KEGG:dre:557363
NextBio:20881960 Bgee:E7FEV1 Uniprot:E7FEV1
Length = 641
Score = 249 (92.7 bits), Expect = 5.5e-35, Sum P(2) = 5.5e-35
Identities = 64/217 (29%), Positives = 110/217 (50%)
Query: 168 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVVTRSLKN 227
LS++L Y+ +I + + + K ALL L +S + L+PYF Y IS V +
Sbjct: 153 LSEDLLKYYQQITRAILGE-DPHLMKVALLDLQSNSKIAALLPYFVYVISG--VKSVSHD 209
Query: 228 FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFVA 285
L L+ + +SL++NP++++ Y+ ++ SV+ C++ N +D HW LR++ A
Sbjct: 210 LDQLNRLLHMVKSLVQNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLRDYAA 268
Query: 286 DLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLILP 345
L++ I G + L ++ +L DP + L HYGA+ GL ALG V ++ P
Sbjct: 269 LLLSHIFWTHGDLVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVERVLYP 328
Query: 346 NLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCA 382
+L Y L+ + N + + +VYGA+ A
Sbjct: 329 HLPAYWANLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
Score = 207 (77.9 bits), Expect = 5.5e-35, Sum P(2) = 5.5e-35
Identities = 49/141 (34%), Positives = 82/141 (58%)
Query: 4 VPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDS 63
VP+E+++++A+S GV LS ++A LA DV YR+RE Q + + MRHA R L+ D +
Sbjct: 12 VPRESVKLMAESAGV-ELSEELAGLLAEDVCYRLREATQNSSQFMRHAKRRKLSVEDFNR 70
Query: 64 ALNLRNVEPIYGFASGDSLRFKRASGLKDLYYIDDKDVELRNV-IETPLPKAPLDTSVAV 122
AL N E + G+ + D+L F+ +L+Y++D+++ L + + T +PK +T V V
Sbjct: 71 ALRWSNTETVCGYGAQDALPFRPLKE-GELFYVEDREINLVELALATNIPKGCAETMVRV 129
Query: 123 HWLAIEGVQPAIPENAPVDAV 143
H ++G P+ AV
Sbjct: 130 HVSYLDGKGNLEPQGTVPTAV 150
>UNIPROTKB|Q58DG7 [details] [associations]
symbol:TAF6 "TBP-associated factor 6 isoform alpha"
species:9913 "Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0045786 "negative regulation of cell cycle" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737 GO:GO:0008285
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0071339
GO:GO:0045786 GO:GO:0051090 GO:GO:0005669 GO:GO:0033276 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 HOGENOM:HOG000253001
HOVERGEN:HBG012489 OMA:QEETCQL EMBL:DAAA02058286 EMBL:BT021630
IPI:IPI00717822 RefSeq:NP_001015525.1 UniGene:Bt.13917
STRING:Q58DG7 Ensembl:ENSBTAT00000054282 GeneID:505638
KEGG:bta:505638 InParanoid:Q58DG7 NextBio:20867237 Uniprot:Q58DG7
Length = 678
Score = 387 (141.3 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 94/253 (37%), Positives = 145/253 (57%)
Query: 108 ETPLPKAPLDTSVAVHWLAIEGVQPAIPENAPVD------AVSDGRRSEYREDGI--SVD 159
E P P AP + A ++ +P E+ P+ A +DG+ E + +
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADGKGKEKKAPPLLEGAP 205
Query: 160 IRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFIS 217
+RL + H LS E QLY+ +I E V S +AL S+A D GL+ ++P F+ FIS
Sbjct: 206 LRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQMLPRFSTFIS 264
Query: 218 EEVVTRSLKN-FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-D 275
E V ++N +LL LMR+ ++L+ NP +++E Y+H+++P+V+TC+VS++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 276 NHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALG 335
NHW LR+F A L+A IC F N+QSR+T+T +++D + YG+I GLA LG
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELG 384
Query: 336 PSVVHLLILPNLE 348
V+ LILP L+
Sbjct: 385 HDVIKTLILPRLQ 397
Score = 354 (129.7 bits), Expect = 7.4e-30, P = 7.4e-30
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+ PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 AVHWLAIEGVQPAIPENAPVDAVSDGRRSEYRE 153
HWL+IEG QPAIPEN P A + +++E E
Sbjct: 132 KAHWLSIEGCQPAIPENPP-PAPKEQQKAEATE 163
>UNIPROTKB|J9NS44 [details] [associations]
symbol:TAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006352
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 EMBL:AAEX03004275
RefSeq:XP_546964.2 Ensembl:ENSCAFT00000049298 GeneID:489846
KEGG:cfa:489846 Uniprot:J9NS44
Length = 678
Score = 387 (141.3 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 94/253 (37%), Positives = 145/253 (57%)
Query: 108 ETPLPKAPLDTSVAVHWLAIEGVQPAIPENAPVD------AVSDGRRSEYREDGI--SVD 159
E P P AP + A ++ +P E+ P+ A +DG+ E + +
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKAQGAAPADGKGKEKKAPPLLEGAP 205
Query: 160 IRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFIS 217
+RL + H LS E QLY+ +I E V S +AL S+A D GL+ ++P F+ FIS
Sbjct: 206 LRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQMLPRFSTFIS 264
Query: 218 EEVVTRSLKN-FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-D 275
E V ++N +LL LMR+ ++L+ NP +++E Y+H+++P+V+TC+VS++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 276 NHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALG 335
NHW LR+F A L+A IC F N+QSR+T+T +++D + YG+I GLA LG
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELG 384
Query: 336 PSVVHLLILPNLE 348
V+ LILP L+
Sbjct: 385 HDVIKTLILPRLQ 397
Score = 354 (129.7 bits), Expect = 7.4e-30, P = 7.4e-30
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+ PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 AVHWLAIEGVQPAIPENAPVDAVSDGRRSEYRE 153
HWL+IEG QPAIPEN P A + +++E E
Sbjct: 132 KAHWLSIEGCQPAIPENPP-PAPKEQQKAEATE 163
>MGI|MGI:109129 [details] [associations]
symbol:Taf6 "TAF6 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10090 "Mus musculus" [GO:0003677
"DNA binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 MGI:MGI:109129
GO:GO:0005737 GO:GO:0008285 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0006367 GO:GO:0071339 GO:GO:0045786 GO:GO:0051090
GO:GO:0005669 GO:GO:0033276 eggNOG:COG5095 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 HOGENOM:HOG000253001
HOVERGEN:HBG012489 OrthoDB:EOG4MKNG0 EMBL:D49439 EMBL:BC058583
IPI:IPI00124566 PIR:JC4245 RefSeq:NP_033341.1 UniGene:Mm.248517
ProteinModelPortal:Q62311 SMR:Q62311 DIP:DIP-493N IntAct:Q62311
MINT:MINT-269059 STRING:Q62311 PhosphoSite:Q62311 PaxDb:Q62311
PRIDE:Q62311 Ensembl:ENSMUST00000048698 Ensembl:ENSMUST00000110936
GeneID:21343 KEGG:mmu:21343 UCSC:uc009aew.1 InParanoid:Q62311
OMA:QEETCQL NextBio:300524 Bgee:Q62311 Genevestigator:Q62311
GermOnline:ENSMUSG00000036980 Uniprot:Q62311
Length = 678
Score = 387 (141.3 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 94/253 (37%), Positives = 144/253 (56%)
Query: 108 ETPLPKAPLDTSVAVHWLAIEGVQPAIPENAPVD------AVSDGRRSEYREDGI--SVD 159
E P P AP + A ++ +P E+ P+ A +DG+ E + +
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGKGKEKKAPPLLEGAP 205
Query: 160 IRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFIS 217
RL + H LS E QLY+ +I E V S +AL S+A D GL+ ++P F+ FIS
Sbjct: 206 FRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQMLPRFSTFIS 264
Query: 218 EEVVTRSLKN-FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-D 275
E V ++N +LL LMR+ ++L+ NP +++E Y+H+++P+V+TC+VS++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 276 NHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALG 335
NHW LR+F A L+A IC F N+QSR+T+T +++D + YG+I GLA LG
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELG 384
Query: 336 PSVVHLLILPNLE 348
V+ LILP L+
Sbjct: 385 HDVIKTLILPRLQ 397
Score = 354 (129.7 bits), Expect = 7.4e-30, P = 7.4e-30
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+ PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 AVHWLAIEGVQPAIPENAPVDAVSDGRRSEYRE 153
HWL+IEG QPAIPEN P A + +++E E
Sbjct: 132 KAHWLSIEGCQPAIPENPP-PAPKEQQKAEATE 163
>RGD|1311608 [details] [associations]
symbol:Taf6 "TAF6 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008285 "negative regulation
of cell proliferation" evidence=IEA;ISO] [GO:0033276 "transcription
factor TFTC complex" evidence=IEA;ISO] [GO:0045786 "negative
regulation of cell cycle" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 RGD:1311608 GO:GO:0005737
GO:GO:0008285 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677
GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367
GO:GO:0071339 GO:GO:0045786 GO:GO:0051090 GO:GO:0005669
GO:GO:0033276 eggNOG:COG5095 GeneTree:ENSGT00640000091486
HOGENOM:HOG000253001 HOVERGEN:HBG012489 OrthoDB:EOG4MKNG0
OMA:QEETCQL EMBL:D49446 IPI:IPI00212680 UniGene:Rn.102447
ProteinModelPortal:Q63801 STRING:Q63801 PhosphoSite:Q63801
PRIDE:Q63801 Ensembl:ENSRNOT00000001829 UCSC:RGD:1311608
InParanoid:Q63801 Genevestigator:Q63801
GermOnline:ENSRNOG00000001355 Uniprot:Q63801
Length = 678
Score = 387 (141.3 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 94/253 (37%), Positives = 144/253 (56%)
Query: 108 ETPLPKAPLDTSVAVHWLAIEGVQPAIPENAPVD------AVSDGRRSEYREDGI--SVD 159
E P P AP + A ++ +P E+ P+ A +DG+ E + +
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGKGKEKKAPPLLEGAP 205
Query: 160 IRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFIS 217
RL + H LS E QLY+ +I E V S +AL S+A D GL+ ++P F+ FIS
Sbjct: 206 FRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQMLPRFSTFIS 264
Query: 218 EEVVTRSLKN-FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-D 275
E V ++N +LL LMR+ ++L+ NP +++E Y+H+++P+V+TC+VS++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 276 NHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALG 335
NHW LR+F A L+A IC F N+QSR+T+T +++D + YG+I GLA LG
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELG 384
Query: 336 PSVVHLLILPNLE 348
V+ LILP L+
Sbjct: 385 HDVIKTLILPRLQ 397
Score = 354 (129.7 bits), Expect = 7.4e-30, P = 7.4e-30
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+ PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 AVHWLAIEGVQPAIPENAPVDAVSDGRRSEYRE 153
HWL+IEG QPAIPEN P A + +++E E
Sbjct: 132 KAHWLSIEGCQPAIPENPP-PAPKEQQKAEATE 163
>UNIPROTKB|E2RFB9 [details] [associations]
symbol:TAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0045786 "negative regulation of cell cycle" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737 GO:GO:0008285
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0071339
GO:GO:0045786 GO:GO:0051090 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00640000091486 OMA:QEETCQL EMBL:AAEX03004275
Ensembl:ENSCAFT00000023284 NextBio:20862962 Uniprot:E2RFB9
Length = 698
Score = 387 (141.3 bits), Expect = 3.7e-34, P = 3.7e-34
Identities = 94/253 (37%), Positives = 145/253 (57%)
Query: 108 ETPLPKAPLDTSVAVHWLAIEGVQPAIPENAPVD------AVSDGRRSEYREDGI--SVD 159
E P P AP + A ++ +P E+ P+ A +DG+ E + +
Sbjct: 167 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKAQGAAPADGKGKEKKAPPLLEGAP 225
Query: 160 IRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFIS 217
+RL + H LS E QLY+ +I E V S +AL S+A D GL+ ++P F+ FIS
Sbjct: 226 LRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQMLPRFSTFIS 284
Query: 218 EEVVTRSLKN-FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-D 275
E V ++N +LL LMR+ ++L+ NP +++E Y+H+++P+V+TC+VS++L R D
Sbjct: 285 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 344
Query: 276 NHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALG 335
NHW LR+F A L+A IC F N+QSR+T+T +++D + YG+I GLA LG
Sbjct: 345 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELG 404
Query: 336 PSVVHLLILPNLE 348
V+ LILP L+
Sbjct: 405 HDVIKTLILPRLQ 417
Score = 354 (129.7 bits), Expect = 8.1e-30, P = 8.1e-30
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 32 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 91
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+ PLD +
Sbjct: 92 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 151
Query: 121 AVHWLAIEGVQPAIPENAPVDAVSDGRRSEYRE 153
HWL+IEG QPAIPEN P A + +++E E
Sbjct: 152 KAHWLSIEGCQPAIPENPP-PAPKEQQKAEATE 183
>UNIPROTKB|P49848 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0045786 "negative regulation of cell cycle"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IDA;TAS] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] Reactome:REACT_71
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737
Reactome:REACT_116125 GO:GO:0008285 GO:GO:0016032 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:CH236956 EMBL:CH471091 GO:GO:0006368
GO:GO:0006367 GO:GO:0071339 GO:GO:0045786 GO:GO:0051090
Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276 eggNOG:COG5095
KO:K03131 CTD:6878 EMBL:L25444 EMBL:U31659 EMBL:AK300005
EMBL:CR627390 EMBL:AY149894 EMBL:BC018115 IPI:IPI00028579
IPI:IPI00376952 IPI:IPI00924712 RefSeq:NP_001177344.1
RefSeq:NP_005632.1 RefSeq:NP_647476.1 UniGene:Hs.489309
ProteinModelPortal:P49848 SMR:P49848 DIP:DIP-29288N DIP:DIP-773N
IntAct:P49848 MINT:MINT-1211769 STRING:P49848 PhosphoSite:P49848
DMDM:1729810 PaxDb:P49848 PRIDE:P49848 DNASU:6878
Ensembl:ENST00000344095 Ensembl:ENST00000437822
Ensembl:ENST00000452041 Ensembl:ENST00000453269 GeneID:6878
KEGG:hsa:6878 UCSC:uc003uti.3 GeneCards:GC07M099704 HGNC:HGNC:11540
HPA:HPA006566 MIM:602955 neXtProt:NX_P49848 PharmGKB:PA36315
HOGENOM:HOG000253001 HOVERGEN:HBG012489 InParanoid:P49848
OrthoDB:EOG4MKNG0 PhylomeDB:P49848 GenomeRNAi:6878 NextBio:26859
ArrayExpress:P49848 Bgee:P49848 CleanEx:HS_TAF6
Genevestigator:P49848 GermOnline:ENSG00000106290 Uniprot:P49848
Length = 677
Score = 385 (140.6 bits), Expect = 7.1e-34, P = 7.1e-34
Identities = 93/253 (36%), Positives = 144/253 (56%)
Query: 108 ETPLPKAPLDTSVAVHWLAIEGVQPAIPENAPVDA------VSDGRRSEYREDGI--SVD 159
E P P AP + A ++ +P E+ P+ +DG+ E + +
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAP 205
Query: 160 IRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFIS 217
+RL + H LS E QLY+ +I E V S +AL S+A D GL+ ++P F+ FIS
Sbjct: 206 LRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQMLPRFSTFIS 264
Query: 218 EEVVTRSLKN-FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-D 275
E V ++N +LL LMR+ ++L+ NP +++E Y+H+++P+V+TC+VS++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 276 NHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALG 335
NHW LR+F A L+A IC F N+QSR+T+T +++D + YG+I GLA LG
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELG 384
Query: 336 PSVVHLLILPNLE 348
V+ LILP L+
Sbjct: 385 HDVIKTLILPRLQ 397
Score = 354 (129.7 bits), Expect = 7.4e-30, P = 7.4e-30
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+ PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 AVHWLAIEGVQPAIPENAPVDAVSDGRRSEYRE 153
HWL+IEG QPAIPEN P A + +++E E
Sbjct: 132 KAHWLSIEGCQPAIPENPP-PAPKEQQKAEATE 163
>UNIPROTKB|J3KR72 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051090 "regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0051090 EMBL:AC073842 HGNC:HGNC:11540
OMA:QEETCQL ProteinModelPortal:J3KR72 Ensembl:ENST00000472509
Uniprot:J3KR72
Length = 734
Score = 385 (140.6 bits), Expect = 9.7e-34, P = 9.7e-34
Identities = 93/253 (36%), Positives = 144/253 (56%)
Query: 108 ETPLPKAPLDTSVAVHWLAIEGVQPAIPENAPVDA------VSDGRRSEYREDGI--SVD 159
E P P AP + A ++ +P E+ P+ +DG+ E + +
Sbjct: 204 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAP 262
Query: 160 IRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFIS 217
+RL + H LS E QLY+ +I E V S +AL S+A D GL+ ++P F+ FIS
Sbjct: 263 LRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQMLPRFSTFIS 321
Query: 218 EEVVTRSLKN-FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-D 275
E V ++N +LL LMR+ ++L+ NP +++E Y+H+++P+V+TC+VS++L R D
Sbjct: 322 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 381
Query: 276 NHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALG 335
NHW LR+F A L+A IC F N+QSR+T+T +++D + YG+I GLA LG
Sbjct: 382 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELG 441
Query: 336 PSVVHLLILPNLE 348
V+ LILP L+
Sbjct: 442 HDVIKTLILPRLQ 454
Score = 354 (129.7 bits), Expect = 9.5e-30, P = 9.5e-30
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 69 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 128
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+ PLD +
Sbjct: 129 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 188
Query: 121 AVHWLAIEGVQPAIPENAPVDAVSDGRRSEYRE 153
HWL+IEG QPAIPEN P A + +++E E
Sbjct: 189 KAHWLSIEGCQPAIPENPP-PAPKEQQKAEATE 220
>ZFIN|ZDB-GENE-040912-23 [details] [associations]
symbol:taf6 "TAF6 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
ZFIN:ZDB-GENE-040912-23 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 KO:K03131 GeneTree:ENSGT00640000091486 CTD:6878
HOGENOM:HOG000253001 HOVERGEN:HBG012489 EMBL:BX927335
EMBL:CABZ01016379 EMBL:CR847545 EMBL:BC081612 IPI:IPI00491415
RefSeq:NP_001004557.1 UniGene:Dr.36557 STRING:Q66HZ5
Ensembl:ENSDART00000042901 GeneID:447818 KEGG:dre:447818
InParanoid:Q66HZ5 NextBio:20832342 Uniprot:Q66HZ5
Length = 636
Score = 375 (137.1 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 69/152 (45%), Positives = 109/152 (71%)
Query: 3 IVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVD 62
I+P ++++ +A+S+G+ +L D L L+ +V YR++EI Q+A+K M H R LT D+D
Sbjct: 13 ILPTDSMKAMAESVGIGSLQEDSCLTLSEEVSYRIKEIAQDALKFMHHGKRCKLTTGDID 72
Query: 63 SALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSVA 121
AL L+NVEP+YGF S + + F+ ASG ++L++ ++K+V+L ++I TPLP+ PLD S+
Sbjct: 73 HALKLKNVEPLYGFQSEEFIPFRFASGGGRELHFYEEKEVDLSDIINTPLPRVPLDVSLK 132
Query: 122 VHWLAIEGVQPAIPENAPVDAVSDGRRSEYRE 153
HWL+I+GVQPAIPEN P A + +++E E
Sbjct: 133 AHWLSIDGVQPAIPENPP-SASKEQQKAESTE 163
Score = 372 (136.0 bits), Expect = 3.3e-32, P = 3.3e-32
Identities = 90/242 (37%), Positives = 133/242 (54%)
Query: 108 ETPLPKAPLDTSVAVHWLAIEGVQPAIPENAPVDAVSDGRRSEYREDGISVDIRLPVKHV 167
E P P A + A ++ V+P + + A S + + ++ H
Sbjct: 147 ENP-PSASKEQQKAESTEPLKAVKPGQEDEGFIQAKGQSAVSAEVKGKEKMRMKPRSTHE 205
Query: 168 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVVTRSLKN 227
LS E QLY+ +I E V S +AL S+A D GL+ ++P F+ FISE V ++N
Sbjct: 206 LSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQN 264
Query: 228 -FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-DNHWDLRNFVA 285
+LL LMR+ ++L+ NP +++E YLH+++P+V+TC+VSK+L R DNHW LR+F A
Sbjct: 265 NLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVTCIVSKQLCLRPDVDNHWALRDFAA 324
Query: 286 DLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLILP 345
L+A C F N+QSR+T+T A LD + YG I GLA LG V+ LI+P
Sbjct: 325 RLMAQSCKTFSTTTNNIQSRITKTFTKALLDEKTQWTTRYGCIAGLAELGHDVIKTLIIP 384
Query: 346 NL 347
L
Sbjct: 385 RL 386
>UNIPROTKB|C9JTY6 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR004823
InterPro:IPR009072 Pfam:PF02969 SMART:SM00803 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 HOGENOM:HOG000253001
IPI:IPI01011696 ProteinModelPortal:C9JTY6 SMR:C9JTY6 STRING:C9JTY6
Ensembl:ENST00000493322 ArrayExpress:C9JTY6 Bgee:C9JTY6
Uniprot:C9JTY6
Length = 255
Score = 354 (129.7 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 65/153 (42%), Positives = 106/153 (69%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+ PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 AVHWLAIEGVQPAIPENAPVDAVSDGRRSEYRE 153
HWL+IEG QPAIPEN P A + +++E E
Sbjct: 132 KAHWLSIEGCQPAIPENPP-PAPKEQQKAEATE 163
>RGD|1310123 [details] [associations]
symbol:Taf6l "TAF6-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0030914 "STAGA
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=ISO]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 RGD:1310123 GO:GO:0005634
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090
IPI:IPI00390765 Ensembl:ENSRNOT00000037327 UCSC:RGD:1310123
ArrayExpress:D4ABK5 Uniprot:D4ABK5
Length = 591
Score = 218 (81.8 bits), Expect = 3.5e-31, Sum P(2) = 3.5e-31
Identities = 61/204 (29%), Positives = 100/204 (49%)
Query: 231 LFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFVADLI 288
L L++VARSL+RNPH+ + PY+ ++ SV+ C++ N +D HW LR+ A L+
Sbjct: 188 LHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLL 246
Query: 289 ASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLILPNLE 348
+ I G + L ++ +L DP + L HYGA+ GL ALG V ++ P+L
Sbjct: 247 SHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLP 306
Query: 349 LYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCAAGLCVYDRLKTVLLRPPKQSRWESNR 408
Y L+ + N + + +VYGA+ L +RL + + + +R
Sbjct: 307 TYWTNLQAVLDDYSVSNAQVKADGHKVYGAI-----LVAVERLLKMKAQAAEPNRGGLGG 361
Query: 409 KGMIVFPSKRKASMDNLMLQ--PP 430
+G + D+L+LQ PP
Sbjct: 362 RG---YRPAEDLPWDSLLLQESPP 382
Score = 203 (76.5 bits), Expect = 3.5e-31, Sum P(2) = 3.5e-31
Identities = 49/142 (34%), Positives = 82/142 (57%)
Query: 4 VPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDS 63
+P+E++ ++A+S G+ LS +VA LA DV YR+RE Q + + M+H R LT D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALNLRNVEPIYGFASGDSLRFKRASGLKDLYYIDDKDVELRNV-IETPLPKAPLDTSVAV 122
AL +VE + G+ S + L + A +LY+ +D++V L + + T +PK +T+V V
Sbjct: 71 ALRWSSVEAVCGYGSQEVLPLRPARE-GELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPAIPENAPVDAVS 144
H ++G P+ + AVS
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVS 151
>UNIPROTKB|C9JFL8 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0005737 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 HOGENOM:HOG000159894
IPI:IPI00926118 ProteinModelPortal:C9JFL8 SMR:C9JFL8 STRING:C9JFL8
Ensembl:ENST00000440225 ArrayExpress:C9JFL8 Bgee:C9JFL8
Uniprot:C9JFL8
Length = 233
Score = 270 (100.1 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 48/117 (41%), Positives = 83/117 (70%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLD 117
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+ PLD
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLD 128
Score = 73 (30.8 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 30/103 (29%), Positives = 46/103 (44%)
Query: 113 KAPLDTSVAVHWLAIEGVQPAIPENAPVDA------VSDGRRSEYREDGI--SVDIRLPV 164
KAP + A ++ +P E+ P+ +DG+ E + + +RL
Sbjct: 132 KAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKP 191
Query: 165 K--HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGL 205
+ H LS E QLY+ +I E V S +AL S+A D GL
Sbjct: 192 RSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGL 233
>UNIPROTKB|E5RHA1 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00975576
ProteinModelPortal:E5RHA1 SMR:E5RHA1 Ensembl:ENST00000523306
ArrayExpress:E5RHA1 Bgee:E5RHA1 Uniprot:E5RHA1
Length = 141
Score = 290 (107.1 bits), Expect = 5.8e-25, P = 5.8e-25
Identities = 56/139 (40%), Positives = 91/139 (65%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L + +A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDE----------DALKFMHMGKRQKLTTSDI 61
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+ PLD +
Sbjct: 62 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 121
Query: 121 AVHWLAIEGVQPAIPENAP 139
HWL+IEG QPAIPEN P
Sbjct: 122 KAHWLSIEGCQPAIPENPP 140
>UNIPROTKB|C9JIS2 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00946556
ProteinModelPortal:C9JIS2 SMR:C9JIS2 STRING:C9JIS2
Ensembl:ENST00000449571 ArrayExpress:C9JIS2 Bgee:C9JIS2
Uniprot:C9JIS2
Length = 134
Score = 277 (102.6 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 49/123 (39%), Positives = 85/123 (69%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+ PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 AVH 123
H
Sbjct: 132 KAH 134
>UNIPROTKB|C9J088 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00926538
ProteinModelPortal:C9J088 SMR:C9J088 STRING:C9J088
Ensembl:ENST00000452438 ArrayExpress:C9J088 Bgee:C9J088
Uniprot:C9J088
Length = 156
Score = 270 (100.1 bits), Expect = 9.2e-23, P = 9.2e-23
Identities = 48/117 (41%), Positives = 83/117 (70%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPKAPLD 117
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+ PLD
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLD 128
>FB|FBgn0014342 [details] [associations]
symbol:mia "meiosis I arrest" species:7227 "Drosophila
melanogaster" [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0048515 "spermatid
differentiation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0007286 "spermatid development"
evidence=TAS] [GO:0007126 "meiosis" evidence=TAS] [GO:0005669
"transcription factor TFIID complex" evidence=ISS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISS] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] InterPro:IPR011442 Pfam:PF07571 GO:GO:0005730
GO:GO:0007286 GO:GO:0001673 GO:GO:0006367 GO:GO:0010468
GO:GO:0051090 GO:GO:0007141 GO:GO:0005669 EMBL:AY752878
ProteinModelPortal:Q5UEC4 SMR:Q5UEC4 STRING:Q5UEC4 PRIDE:Q5UEC4
FlyBase:FBgn0014342 InParanoid:Q5UEC4 OrthoDB:EOG41G1KF
ArrayExpress:Q5UEC4 Bgee:Q5UEC4 Uniprot:Q5UEC4
Length = 593
Score = 256 (95.2 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 93/359 (25%), Positives = 164/359 (45%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
S+ P+ + S G++ L VA L+ +V+ + ++ EA K MR L + +
Sbjct: 30 SLSPRSLSAIFFHSTGLH-LDDGVAQWLSINVKEDITNLLNEAGKYMRRIRDRRLQLSHI 88
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGLKDLYYIDDKDVELRNVIETPLPKAPLDTSVA 121
A+ + + + Y F R D + V L+ V E + + V+
Sbjct: 89 QHAVRMHD-DLCYDI-------FFRLVHCDDCKMPPSQKV-LKTVREAVTAEKKDELLVS 139
Query: 122 VHWLAIEGVQPAIPENAPVDAVSDGRRSEYREDGISVDIRLPVKHVLSKELQLYFDKIRE 181
E VQ ++PE P ++ V ++ ++ LS E Q +F+ + E
Sbjct: 140 YPESVQESVQESVPEPVPETSLEPPPMHTGWLKVEQVLLKPSKRYPLSMEQQNFFELVTE 199
Query: 182 LTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEV-VTRSLKNFSLLFALMRVARS 240
V S AL +++ D L L+P T FI++ V + + +N LL LMR+ R+
Sbjct: 200 ACVGDLESRRVL-ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLYLMRMVRA 258
Query: 241 LLRNPHIHIEPYLHQMMPSVITCLVSKRL-GNRFSDNHWDLRNFVADLIASICTRFGHVY 299
LL N + YLH ++P+V++CL++K++ + S++HW LR + +++A I +F
Sbjct: 259 LLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIVRQFDAAD 318
Query: 300 QNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLILPNLELYLKFLEPEM 358
+ RV A L K L+ +GA+ GL +G V ILP L+ + ++ M
Sbjct: 319 NGILPRVIGVYNKALLK--KPLTTVFGAVIGLGKMGNHAVLACILPQLKYLSEHIDSHM 375
Score = 37 (18.1 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 443 MPVNSMAVNMQGPSGGFSTPVEGPRAGVS 471
+P N + Q P +S V G +S
Sbjct: 484 LPKNGIRPTSQAPKSVYSISVNGQTVKIS 512
>UNIPROTKB|C9J7C4 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00970799
ProteinModelPortal:C9J7C4 SMR:C9J7C4 STRING:C9J7C4
Ensembl:ENST00000451699 ArrayExpress:C9J7C4 Bgee:C9J7C4
Uniprot:C9J7C4
Length = 114
Score = 221 (82.9 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 40/103 (38%), Positives = 72/103 (69%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVEL 103
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDL 114
>UNIPROTKB|F8WEJ7 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00925005
ProteinModelPortal:F8WEJ7 SMR:F8WEJ7 Ensembl:ENST00000421980
ArrayExpress:F8WEJ7 Bgee:F8WEJ7 Uniprot:F8WEJ7
Length = 114
Score = 212 (79.7 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 38/101 (37%), Positives = 70/101 (69%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDV 101
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K++
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEL 112
>UNIPROTKB|E9PP94 [details] [associations]
symbol:TAF6L "TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 6L"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 EMBL:AP001160 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 HGNC:HGNC:17305 ChiTaRS:TAF6L IPI:IPI00983560
ProteinModelPortal:E9PP94 SMR:E9PP94 Ensembl:ENST00000529509
UCSC:uc009yof.3 ArrayExpress:E9PP94 Bgee:E9PP94 Uniprot:E9PP94
Length = 145
Score = 198 (74.8 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 46/136 (33%), Positives = 80/136 (58%)
Query: 4 VPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDS 63
+P+E++ ++A+S G+ LS +VA LA DV YR+RE Q + + M+H R LT D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALNLRNVEPIYGFASGDSLRFKRASGLKDLYYIDDKDVELRNV-IETPLPKAPLDTSVAV 122
AL +VE + G+ S ++L + A +LY+ +D++V L + + T +PK +T+V V
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPARE-GELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPAIPENA 138
H ++G P+ +
Sbjct: 130 HVSYLDGKGNLAPQGS 145
>UNIPROTKB|E5RKA5 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00983929
ProteinModelPortal:E5RKA5 SMR:E5RKA5 Ensembl:ENST00000520135
ArrayExpress:E5RKA5 Bgee:E5RKA5 Uniprot:E5RKA5
Length = 114
Score = 192 (72.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 39/113 (34%), Positives = 72/113 (63%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L + +A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDE----------DALKFMHMGKRQKLTTSDI 61
Query: 62 DSALNLRNVEPIYGFASGDSLRFKRASGL-KDLYYIDDKDVELRNVIETPLPK 113
D AL L+NVEP+YGF + + + F+ ASG ++LY+ ++K+V+L ++I TPLP+
Sbjct: 62 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 114
>WB|WBGene00021363 [details] [associations]
symbol:taf-6.2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR011442 Pfam:PF07571 GO:GO:0005634 GO:GO:0009792
GO:GO:0000003 GO:GO:0051090 eggNOG:COG5095
GeneTree:ENSGT00640000091486 EMBL:FO080976 RefSeq:NP_500397.1
ProteinModelPortal:Q965Y0 SMR:Q965Y0 STRING:Q965Y0 PaxDb:Q965Y0
EnsemblMetazoa:Y37E11AL.8 GeneID:177129 KEGG:cel:CELE_Y37E11AL.8
UCSC:Y37E11AL.8 CTD:177129 WormBase:Y37E11AL.8 HOGENOM:HOG000018550
InParanoid:Q965Y0 OMA:EMSRGRF NextBio:895468 Uniprot:Q965Y0
Length = 814
Score = 193 (73.0 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 74/282 (26%), Positives = 134/282 (47%)
Query: 7 ETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDVDSALN 66
+ IE + +G +L++ A ++ +R I+Q A K +R L +DVD A
Sbjct: 98 DVIERSPELLG--SLTTAAANSIGACTRLVLRTIIQNAKKSASRENRKRLVPSDVDIACG 155
Query: 67 LRNVE-----PIYG-FASGDSLRFKRASGLKDLYYIDDKDVELRNVIETPLPKAPLDTSV 120
+ ++ P+ S D + + R K+ Y ID E+ V + + +
Sbjct: 156 IAQIDYNLTCPLLRPTPSSDRMYWGRKL-TKEHYTIDANSKEM--VSHERFCDSIM---I 209
Query: 121 AVHWLAIEGVQPAIPENA-PVDA---VSDGRRSEYREDGISVD-IR---LPVKHV----L 168
HWL ++G+QP +PEN P + + + R G V I+ +P K +
Sbjct: 210 KDHWLVVDGIQPCLPENVIPSEVKRRFQEQQHETQRAHGFGVPGIKREPMPEKRMSTQTF 269
Query: 169 SKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVVTR-SLKN 227
S E Q+ + +I ++ S S S ++ L ++ D+G+ L F I+E +N
Sbjct: 270 SMEHQVLYSEITKILTSGS-SLQRQKVLETIETDTGIQFLAGRFVILIAEGTRLHIGTRN 328
Query: 228 FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRL 269
L L+++ SL++NP+I +E YL+ ++PS+I+C+VSK +
Sbjct: 329 IRGLANLLKLTWSLMKNPNIRLEKYLYVLVPSLISCVVSKNM 370
Score = 60 (26.2 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 280 LRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVV 339
LR L+A + +++ ++ NL R+ +TL L + + YG + L A G +
Sbjct: 416 LREASGKLLAELSSQYQNL--NLNVRIIQTL-RGVLSGNQDPAAIYGVLCTLFAFGNLTI 472
Query: 340 HLLILPNL-ELY 350
+ ++LP + ++Y
Sbjct: 473 NSVVLPKMHDIY 484
>WB|WBGene00006387 [details] [associations]
symbol:taf-6.1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 GO:GO:0051090
eggNOG:COG5095 KO:K03131 GeneTree:ENSGT00640000091486 EMBL:FO081732
RefSeq:NP_493919.1 ProteinModelPortal:Q9GZI6 SMR:Q9GZI6
IntAct:Q9GZI6 STRING:Q9GZI6 PaxDb:Q9GZI6 EnsemblMetazoa:W09B6.2
GeneID:173498 KEGG:cel:CELE_W09B6.2 UCSC:W09B6.2 CTD:173498
WormBase:W09B6.2 InParanoid:Q9GZI6 OMA:IIYAGRV NextBio:879913
Uniprot:Q9GZI6
Length = 470
Score = 154 (59.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 56/212 (26%), Positives = 98/212 (46%)
Query: 130 VQPAIPE-NAPVDAVSDGRRSEYRE--DGISVDIRLPVK----HVLSKELQLYFDKIREL 182
V IPE N P + + + +R+ +D ++ +K +L+ E Q++ I +
Sbjct: 182 VMTMIPEKNTPSSSTTSSLQM-FRDAVKTAKIDQKVGLKPSTIEILTVEQQIFMKDIITV 240
Query: 183 TVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVVTR-SLKNFSLLFALMRVARSL 241
+ + + +AL +L D+GL +P+ T I + + S + SL+ RV RSL
Sbjct: 241 CMGQDDKKRH-EALYTLETDAGLQVFLPHLTERICKSISANISQRCLSLIIYAGRVLRSL 299
Query: 242 LRNPHIHIEPYLHQMMPSVITCLVSKRLGNR-FSDNHWDLRNFVADLIASICTRFGHVYQ 300
N + LH ++P++++C V + + R +DNHW LR+F A + + V +
Sbjct: 300 SHNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTLVGLVR--DQVDK 357
Query: 301 NLQSRVTRTLL---HA-FLDPTKSLSQHYGAI 328
+ R R L H F D S S YG +
Sbjct: 358 HDAGRTARRLFDFSHRIFRDTGSSFSMIYGTV 389
>UNIPROTKB|C9JHQ8 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00926390
ProteinModelPortal:C9JHQ8 SMR:C9JHQ8 STRING:C9JHQ8
Ensembl:ENST00000417349 ArrayExpress:C9JHQ8 Bgee:C9JHQ8
Uniprot:C9JHQ8
Length = 76
Score = 131 (51.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 2 SIVPKETIEVIAQSIGVYNLSSDVALALAPDVEYRVREIMQEAIKCMRHAHRTVLTANDV 61
+++P E+++V+A+S+G+ + + L +V YR++EI Q+A+K M R LT +D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DSAL 65
D AL
Sbjct: 72 DYAL 75
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 535 535 0.00093 119 3 11 22 0.36 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 612 (65 KB)
Total size of DFA: 291 KB (2152 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.07u 0.13s 43.20t Elapsed: 00:00:02
Total cpu time: 43.08u 0.13s 43.21t Elapsed: 00:00:02
Start: Thu May 9 22:20:45 2013 End: Thu May 9 22:20:47 2013