BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009434
(535 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FXT6|PEX14_ARATH Peroxisomal membrane protein PEX14 OS=Arabidopsis thaliana GN=PEX14
PE=1 SV=2
Length = 507
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 264/470 (56%), Positives = 327/470 (69%), Gaps = 47/470 (10%)
Query: 47 SVFVNSEPMREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDPPP 106
SVF NSEP+RE+Q+QNA+KFLSHP+VRGSPVI+RRSFLE+KGLTKEEIDEAFRRVPDPPP
Sbjct: 45 SVFKNSEPIREDQIQNAIKFLSHPRVRGSPVIHRRSFLERKGLTKEEIDEAFRRVPDPPP 104
Query: 107 SAQATSANQAVGQVKSSSSNIQSQAPTQALQPQPAGAAPTAVSPVSTTMMSRFHWYHAVL 166
S+Q T GQ + S +Q QA +QP A AP V+P +SRF WYHA+L
Sbjct: 105 SSQTTVTTSQDGQ--QAVSTVQPQA----MQPVVAAPAPLIVTP-QAAFLSRFRWYHAIL 157
Query: 167 AVGLLAASGAGTAVFFKKSLIPRLKSWIRKVVLEEEDDSENKSIAKPSLAEEAAAAAKAA 226
AVG+LAASGAGTAVF K+SLIPR KSW+++++LEEE D K+ AKPSLAEEA AAAKAA
Sbjct: 158 AVGVLAASGAGTAVFIKRSLIPRFKSWVQRIMLEEETDPLKKADAKPSLAEEAVAAAKAA 217
Query: 227 AAAASDVAKASQELLNSKNEERRYFSELMNLLDVQLQEMKSMSNSIRKLEGPSNNSGRTS 286
+AAASDVA+ SQE++ +KNEER+YF +L +LL VQ+QEMKS+SN+IRKLEG SNN +
Sbjct: 218 SAAASDVARVSQEMMITKNEERKYFEDLTHLLGVQVQEMKSLSNNIRKLEGQSNNIPKIY 277
Query: 287 LVNQEDHRDSVTGVKQPYANG-KADFDMQSVRSSSPP-APGEPSVAPHPKSYMEIMAMVQ 344
+QE + SVT ++PY NG D+D +S RS+SPP AP + S PHPKSYM+IM+M+Q
Sbjct: 278 SADQEVYNGSVTTARKPYTNGSNVDYDTRSARSASPPAAPADSSAPPHPKSYMDIMSMIQ 337
Query: 345 RGEKPPNIRDINDLPPNPNQQLPNPRLAPKAKPWEVGQAQNASGQVIQSQVSAEGLNFKV 404
RGEKP NIR+IND+PPNPNQ L +PR+APK+KPW+ GQA
Sbjct: 338 RGEKPSNIREINDMPPNPNQPLSDPRIAPKSKPWDYGQAP-------------------- 377
Query: 405 QDNGLNHQSDDDSSVPWWQRKNVKITEVGEDEIKAGPYSVRTNEPPV--------QRTWV 456
QD N Q WWQ+KN + T+ G + A ++ NE QR+WV
Sbjct: 378 QDESSNGQ--------WWQQKNPRSTDFGYETTTAARFTANQNETSTMEPAAFQRQRSWV 429
Query: 457 PPQPPPVVMPEAAEAIRRPKPSGPTEQSTSHQLASQTSEVTDELQRITKI 506
PPQPPPV M EA EAIRRPKP +Q + + S V+DELQ+ITK
Sbjct: 430 PPQPPPVAMAEAVEAIRRPKPQAKIDQEAA--ASDGQSGVSDELQKITKF 477
>sp|Q642G4|PEX14_RAT Peroxisomal membrane protein PEX14 OS=Rattus norvegicus GN=Pex14
PE=1 SV=1
Length = 376
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 114/252 (45%), Gaps = 47/252 (18%)
Query: 37 EAAEQPISSPSVFVNSEPM--REEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEI 94
E AEQP + PS SE + RE + AVKFL + +VR SP+ RR+FL+KKGLT EEI
Sbjct: 5 EQAEQP-NQPSSSPGSENVVPREPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTDEEI 63
Query: 95 DEAFRRVPDPPPSAQATSANQAVGQVKSSSSNIQSQAPTQALQPQPAGAAPTAVSPVSTT 154
D AF Q G S + P +QP P +S +
Sbjct: 64 DLAF----------------QQSGTASDEPSPVGPATPVVPVQP------PHLISQPYSP 101
Query: 155 MMSRFHWYHAVLAVGLLAASGAGTAVFFKKSLIPRLKSWIRKVVLEEEDDSENKSIAKPS 214
SR+ Y A LA+ +LA G +KK L+P ++L +D + S
Sbjct: 102 GGSRWRDYGA-LAI-ILAGIAFGFHQLYKKYLLP--------LILGGREDRKQLERMAAS 151
Query: 215 LAEEAAAAAKAAAAAASDVAKASQELLNSKNEERRYFSELMN----------LLDVQ-LQ 263
L+E + + A+ + +A QELL + ++ + + + +L+ Q +
Sbjct: 152 LSELSGSVAQTVTQVQTTLASV-QELLRQQQQKVQELAHELAAAKATTSTNWILESQNIN 210
Query: 264 EMKSMSNSIRKL 275
E+KS NS++ L
Sbjct: 211 ELKSEINSLKGL 222
>sp|Q9R0A0|PEX14_MOUSE Peroxisomal membrane protein PEX14 OS=Mus musculus GN=Pex14 PE=1
SV=1
Length = 376
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 115/261 (44%), Gaps = 65/261 (24%)
Query: 37 EAAEQPI--SSPSVFVNSEPMREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEI 94
E AEQP SSP N P RE + AVKFL + +VR SP+ RR+FL+KKGLT EEI
Sbjct: 5 EQAEQPNQPSSPPGSENVVP-REPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTDEEI 63
Query: 95 DEAFRRVPDPPPSAQATSANQAVGQVKSSSSNIQSQAPTQALQPQPAGAAPTAVSPVSTT 154
D AF+ Q+ T A +P P G A T V PV
Sbjct: 64 DLAFQ------------------------------QSGTAADEPSPLGPA-TPVVPVQPP 92
Query: 155 MM---------SRFHWYHAVLAVGLLAASGAGTAVFFKKSLIPRLKSWIRKVVLEEEDDS 205
+ SR+ Y A LA+ ++A G +K+ L+P ++L +D
Sbjct: 93 HLTPQPYSPRGSRWRDYGA-LAI-IMAGIAFGFHQLYKRYLLP--------LILGGREDR 142
Query: 206 ENKSIAKPSLAEEAAAAAKAAAAAASDVAKASQELLNSKNEERRYFSELMN--------- 256
+ SL+E + A+ + +A QELL + ++ + + +
Sbjct: 143 KQLERMAASLSELSGTVAQTVTQVQTTLASV-QELLRQQQQKVQELAHELATAKATTSTN 201
Query: 257 -LLDVQ-LQEMKSMSNSIRKL 275
+L+ Q + E+KS NS++ L
Sbjct: 202 WILESQNINELKSEINSLKGL 222
>sp|O75381|PEX14_HUMAN Peroxisomal membrane protein PEX14 OS=Homo sapiens GN=PEX14 PE=1
SV=1
Length = 377
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 116/251 (46%), Gaps = 45/251 (17%)
Query: 37 EAAEQPISSPSVFVNSEPM--REEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEI 94
E AEQP S PS SE + RE + AVKFL + +VR SP+ RR+FL+KKGLT EEI
Sbjct: 5 EQAEQP-SQPSSTPGSENVLPREPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTDEEI 63
Query: 95 DEAFRRVPDPPPSAQATSANQAVGQVKSSSSNIQSQAPTQALQPQPAGAAPTAVSPVSTT 154
D AF++ S A ++G TQ + QP P +S +
Sbjct: 64 DMAFQQ------SGTAADEPSSLGPA------------TQVVPVQP----PHLISQPYSP 101
Query: 155 MMSRFHWYHAVLAVGLLAASGAGTAVFFKKSLIPRLKSWIRKVVLEEEDDSENKSIAKPS 214
SR+ Y A LA+ ++A G +KK L+P ++L +D + +
Sbjct: 102 AGSRWRDYGA-LAI-IMAGIAFGFHQLYKKYLLP--------LILGGREDRKQLERMEAG 151
Query: 215 LAEEAAAAAKAAAAAASDVAKASQELLNSKNEERRYFSELMN---------LLDVQ-LQE 264
L+E + + A+ + +A + L+ + + + EL +L+ Q + E
Sbjct: 152 LSELSGSVAQTVTQLQTTLASVQELLIQQQQKIQELAHELAAAKATTSTNWILESQNINE 211
Query: 265 MKSMSNSIRKL 275
+KS NS++ L
Sbjct: 212 LKSEINSLKGL 222
>sp|Q9Z2Z3|PEX14_CRILO Peroxisomal membrane protein PEX14 OS=Cricetulus longicaudatus
GN=PEX14 PE=2 SV=1
Length = 377
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 56/237 (23%)
Query: 56 REEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRR----VPDPPPSAQAT 111
RE + AVKFL + +VR SP+ RR+FL+KKGLT +EID AF++ +PP AT
Sbjct: 25 REPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTDDEIDLAFQQSGTATEEPPSLGLAT 84
Query: 112 SANQAVGQVKSSSSNIQSQAPTQA--LQPQPAGAAPTAVSPVSTTMMSRFHWYHAVLAVG 169
AP Q L QP SP S SR+ Y A LA+
Sbjct: 85 PV-----------------APVQTPHLIAQPC-------SPGS----SRWRDYGA-LAI- 114
Query: 170 LLAASGAGTAVFFKKSLIPRLKSWIRKVVLEEEDDSENKSIAKPSLAEEAAAAAKAAAAA 229
++A G +KK L+P ++L +D + SL+E + + A+
Sbjct: 115 IMAGIAFGFHQLYKKYLLP--------LILGGREDRKQLERMASSLSELSGSVAQTVTQV 166
Query: 230 ASDVAKASQELLNSKNEERRYFSELMN----------LLDVQ-LQEMKSMSNSIRKL 275
+ +A QELL + ++ + + + +L+ Q + E+KS NS++ L
Sbjct: 167 QTTLASV-QELLRQQQQKVQELAHELAAAKATTSTNWILESQNINELKSEINSLKGL 222
>sp|Q54C55|PEX14_DICDI Peroxisomal membrane protein PEX14 OS=Dictyostelium discoideum
GN=pex14 PE=3 SV=1
Length = 748
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 47 SVFVNSEPMREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRV 101
S+ S RE+ V+ AV FL++P V+ + + + ++LEKKGLT +E+ EA +RV
Sbjct: 133 SILSPSSNFREDMVKKAVLFLNNPNVKNTALARKVAYLEKKGLTSDEVKEALKRV 187
>sp|O60065|PEX14_SCHPO Peroxisomal membrane protein pex14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pex14 PE=3 SV=1
Length = 286
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 55 MREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDP 104
MRE+ ++N+V+FL V +P + + FL+ KGLT EEI EAF+ +P
Sbjct: 1 MREDLLRNSVEFLREKTVLDAPDVKKIEFLKSKGLTAEEIQEAFKLAKNP 50
>sp|Q9HG09|PEX14_PICPA Peroxisomal membrane protein PEX14 OS=Komagataella pastoris
GN=PEX14 PE=1 SV=1
Length = 425
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 55 MREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRR 100
+REE V +AV+FL +P++ SP+ + F+E KGL + E+ EA R
Sbjct: 4 IREEMVTSAVEFLKNPQIADSPLAKKIEFIESKGLNEAEVKEALLR 49
>sp|P78723|PEX14_PICAN Peroxisomal membrane protein PER10 OS=Pichia angusta GN=PEX14 PE=3
SV=1
Length = 351
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 56 REEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRR 100
R E V +AV+FL + SP+ + FLE KGLT++EI+EA ++
Sbjct: 10 RAELVSSAVEFLLDQSIADSPLAKKVEFLESKGLTQQEIEEALQK 54
>sp|P53112|PEX14_YEAST Peroxisomal membrane protein PEX14 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PEX14 PE=1 SV=1
Length = 341
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 56 REEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFR 99
R+ +AV FL ++ +P++ + FL+ KGLT++EI+ A +
Sbjct: 9 RKALFDSAVSFLKDESIKDAPLLKKIEFLKSKGLTEKEIEIAMK 52
>sp|Q72H75|GATB_THET2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 /
DSM 7039) GN=gatB PE=3 SV=1
Length = 469
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 388 GQVIQSQVSAEGLN-FKVQDNGLNHQSDDDSSVPWWQRKNVKITEVGEDEIKAGPYSVRT 446
G+ + ++V + LN FK L ++ + + + + VK +G +E Y +RT
Sbjct: 197 GEPLGTKVEIKNLNSFKSVQRALEYEIRRQTEI-LRRGEKVKQATMGFEEGSGKTYPMRT 255
Query: 447 NEPPVQRTWVP-PQPPPVVMP-EAAEAIRRPKPSGPTEQSTSHQ 488
E + P P PPVV+P + E +RR P P E+ ++
Sbjct: 256 KEEEADYRYFPEPDLPPVVIPRDWLEEVRRSLPELPWEKEARYR 299
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.122 0.342
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,934,464
Number of Sequences: 539616
Number of extensions: 8817992
Number of successful extensions: 45244
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 315
Number of HSP's that attempted gapping in prelim test: 44189
Number of HSP's gapped (non-prelim): 1353
length of query: 535
length of database: 191,569,459
effective HSP length: 122
effective length of query: 413
effective length of database: 125,736,307
effective search space: 51929094791
effective search space used: 51929094791
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 64 (29.3 bits)